Your job contains 1 sequence.
>psy6602
VQHERGPRKPKIHNAHHQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYPPSGLKSPPP
PSHHHPSMFLATHQPPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQ
LLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVNNEIKLIQEILARFR
QLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRL
LLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEMLQDQ
AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY
TMEKSYG
The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6602
(367 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015381 - symbol:dsf "dissatisfaction" species:722... 707 1.8e-76 2
UNIPROTKB|F1ML62 - symbol:NR2E3 "Photoreceptor-specific n... 435 4.2e-47 3
UNIPROTKB|Q9TTF0 - symbol:NR2E3 "Photoreceptor-specific n... 425 4.6e-46 3
MGI|MGI:1100526 - symbol:Nr2e1 "nuclear receptor subfamil... 468 1.9e-44 1
UNIPROTKB|Q91379 - symbol:NR2E1 "Nuclear receptor subfami... 465 3.9e-44 1
UNIPROTKB|F1P0M4 - symbol:NR2E3 "Uncharacterized protein"... 432 4.7e-44 2
UNIPROTKB|F1MN68 - symbol:NR2E1 "Uncharacterized protein"... 464 5.0e-44 1
UNIPROTKB|F1PD89 - symbol:NR2E1 "Uncharacterized protein"... 464 5.0e-44 1
UNIPROTKB|Q6ZMP8 - symbol:NR2E1 "Nuclear receptor subfami... 464 5.0e-44 1
UNIPROTKB|Q9Y466 - symbol:NR2E1 "Nuclear receptor subfami... 464 5.0e-44 1
UNIPROTKB|F1RT26 - symbol:NR2E1 "Uncharacterized protein"... 464 5.0e-44 1
UNIPROTKB|I3LU21 - symbol:NR2E1 "Uncharacterized protein"... 464 5.0e-44 1
UNIPROTKB|F1SIS0 - symbol:F1SIS0 "Uncharacterized protein... 434 4.1e-43 2
ZFIN|ZDB-GENE-040801-127 - symbol:nr2e1 "nuclear receptor... 446 4.0e-42 1
UNIPROTKB|F1Q176 - symbol:NR2E1 "Uncharacterized protein"... 435 5.9e-41 1
MGI|MGI:1346317 - symbol:Nr2e3 "nuclear receptor subfamil... 431 1.6e-40 1
UNIPROTKB|Q9Y5X4 - symbol:NR2E3 "Photoreceptor-specific n... 430 2.0e-40 1
FB|FBgn0034012 - symbol:Hr51 "Hormone receptor 51" specie... 402 7.2e-40 2
ZFIN|ZDB-GENE-041114-63 - symbol:nr2e3 "nuclear receptor ... 422 1.4e-39 1
ZFIN|ZDB-GENE-990415-252 - symbol:nr2f2 "nuclear receptor... 385 4.5e-38 2
UNIPROTKB|F1NAB6 - symbol:LOC100859519 "Uncharacterized p... 385 1.2e-35 1
UNIPROTKB|F1NGT1 - symbol:LOC100859519 "Uncharacterized p... 385 1.2e-35 1
UNIPROTKB|F1NJL8 - symbol:LOC100859519 "Uncharacterized p... 385 1.2e-35 1
UNIPROTKB|Q90733 - symbol:NR2F2 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|A4IFS2 - symbol:NR2F2 "NR2F2 protein" species:9... 385 1.2e-35 1
UNIPROTKB|Q9TTR7 - symbol:NR2F2 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|F1PX81 - symbol:NR2F2 "Uncharacterized protein"... 385 1.2e-35 1
UNIPROTKB|P24468 - symbol:NR2F2 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|B5A7P0 - symbol:Nr2f2 "Orphan nuclear receptor ... 385 1.2e-35 1
UNIPROTKB|F1SCJ6 - symbol:NR2F2 "Uncharacterized protein"... 385 1.2e-35 1
MGI|MGI:1352452 - symbol:Nr2f2 "nuclear receptor subfamil... 385 1.2e-35 1
RGD|69305 - symbol:Nr2f2 "nuclear receptor subfamily 2, g... 385 1.2e-35 1
UNIPROTKB|O09018 - symbol:Nr2f2 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|A6QPQ9 - symbol:NR2F1 "NR2F1 protein" species:9... 385 1.2e-35 1
UNIPROTKB|F1N056 - symbol:NR2F1 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|Q9TTR8 - symbol:NR2F1 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|P10589 - symbol:NR2F1 "COUP transcription facto... 385 1.2e-35 1
UNIPROTKB|F1RNX7 - symbol:NR2F1 "Uncharacterized protein"... 385 1.2e-35 1
MGI|MGI:1352451 - symbol:Nr2f1 "nuclear receptor subfamil... 385 1.2e-35 1
UNIPROTKB|F2Z3S9 - symbol:Nr2f1 "Protein Nr2f1" species:1... 385 1.2e-35 1
ZFIN|ZDB-GENE-980526-115 - symbol:nr2f1a "nuclear recepto... 384 1.5e-35 1
UNIPROTKB|F1NTE7 - symbol:F1NTE7 "Uncharacterized protein... 383 1.9e-35 1
ZFIN|ZDB-GENE-990415-253 - symbol:nr2f5 "nuclear receptor... 383 1.9e-35 1
ZFIN|ZDB-GENE-040426-1438 - symbol:nr2f1b "nuclear recept... 373 2.2e-34 1
UNIPROTKB|E2R3A8 - symbol:E2R3A8 "Uncharacterized protein... 358 8.5e-33 1
UNIPROTKB|F6Y5T4 - symbol:NR2F2 "Uncharacterized protein"... 358 8.5e-33 1
UNIPROTKB|F1N3S3 - symbol:NR2F6 "Uncharacterized protein"... 357 1.1e-32 1
UNIPROTKB|E2R3D0 - symbol:NR2F6 "Uncharacterized protein"... 357 1.1e-32 1
UNIPROTKB|P10588 - symbol:NR2F6 "Nuclear receptor subfami... 357 1.1e-32 1
UNIPROTKB|F1S962 - symbol:NR2F6 "Uncharacterized protein"... 357 1.1e-32 1
MGI|MGI:1352453 - symbol:Nr2f6 "nuclear receptor subfamil... 357 1.1e-32 1
UNIPROTKB|F1NNE1 - symbol:F1NNE1 "Uncharacterized protein... 356 1.4e-32 1
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 352 3.7e-32 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 352 3.7e-32 1
UNIPROTKB|E2QW41 - symbol:NR2F2 "Uncharacterized protein"... 347 1.3e-31 1
ZFIN|ZDB-GENE-030131-4362 - symbol:nr2f6a "nuclear recept... 341 5.4e-31 1
ZFIN|ZDB-GENE-040426-2351 - symbol:nr2f6b "nuclear recept... 341 5.4e-31 1
FB|FBgn0003720 - symbol:tll "tailless" species:7227 "Dros... 216 1.6e-27 2
UNIPROTKB|P51129 - symbol:rxrg "Retinoic acid receptor RX... 276 4.6e-26 2
UNIPROTKB|B3KY83 - symbol:RXRA "cDNA FLJ16020 fis, clone ... 267 6.4e-26 2
RGD|3610 - symbol:Rxra "retinoid X receptor alpha" specie... 270 8.4e-26 2
UNIPROTKB|Q0VJ96 - symbol:Rxra "Retinoic acid receptor RX... 270 8.4e-26 2
UNIPROTKB|F1P6M9 - symbol:RXRA "Uncharacterized protein" ... 270 1.2e-25 2
ZFIN|ZDB-GENE-990415-243 - symbol:rxrab "retinoid x recep... 265 1.7e-25 2
UNIPROTKB|P19793 - symbol:RXRA "Retinoic acid receptor RX... 267 1.7e-25 2
UNIPROTKB|F1MX52 - symbol:RXRA "Uncharacterized protein" ... 267 2.1e-25 2
UNIPROTKB|F1NH64 - symbol:RXRA "Uncharacterized protein" ... 265 2.1e-25 2
ZFIN|ZDB-GENE-070314-2 - symbol:rxraa "retinoid X recepto... 266 2.1e-24 2
UNIPROTKB|P28702 - symbol:RXRB "Retinoic acid receptor RX... 263 3.5e-24 2
UNIPROTKB|A6H7I6 - symbol:RXRB "Uncharacterized protein" ... 263 5.6e-24 2
UNIPROTKB|A5D9P3 - symbol:RXRB "Retinoid X receptor, beta... 263 5.6e-24 2
UNIPROTKB|F1P0D1 - symbol:F1P0D1 "Uncharacterized protein... 282 6.3e-24 1
UNIPROTKB|E1B9Y6 - symbol:NR2C2 "Uncharacterized protein"... 282 6.6e-24 1
UNIPROTKB|Q5TJF7 - symbol:RXRB "Retinoic acid receptor RX... 263 7.3e-24 2
UNIPROTKB|Q28CK1 - symbol:nr2c1 "Nuclear receptor subfami... 280 1.2e-23 1
UNIPROTKB|P49116 - symbol:NR2C2 "Nuclear receptor subfami... 279 1.3e-23 1
UNIPROTKB|F1SPJ9 - symbol:NR2C2 "Uncharacterized protein"... 279 1.3e-23 1
RGD|3201 - symbol:Nr2c2 "nuclear receptor subfamily 2, gr... 279 1.3e-23 1
UNIPROTKB|E2RI85 - symbol:NR2C2 "Uncharacterized protein"... 279 1.5e-23 1
UNIPROTKB|Q6GN21 - symbol:nr2c1-a "Nuclear receptor subfa... 279 1.6e-23 1
RGD|3611 - symbol:Rxrb "retinoid X receptor beta" species... 261 1.6e-23 2
MGI|MGI:1352466 - symbol:Nr2c2 "nuclear receptor subfamil... 278 1.7e-23 1
UNIPROTKB|G3V7F5 - symbol:Nr2c2 "RCG56527, isoform CRA_c"... 278 1.7e-23 1
UNIPROTKB|P48443 - symbol:RXRG "Retinoic acid receptor RX... 274 1.9e-23 1
UNIPROTKB|Q0VC20 - symbol:RXRG "Retinoic acid receptor RX... 274 1.9e-23 1
UNIPROTKB|E2RD69 - symbol:RXRG "Uncharacterized protein" ... 274 1.9e-23 1
UNIPROTKB|Q0GFF6 - symbol:RXRG "Retinoic acid receptor RX... 274 1.9e-23 1
MGI|MGI:98216 - symbol:Rxrg "retinoid X receptor gamma" s... 274 1.9e-23 1
RGD|620046 - symbol:Rxrg "retinoid X receptor gamma" spec... 273 2.4e-23 1
ZFIN|ZDB-GENE-080403-8 - symbol:nr2c2 "nuclear receptor s... 277 2.4e-23 1
UNIPROTKB|F1NSP3 - symbol:RXRG "Retinoic acid receptor RX... 273 2.5e-23 1
UNIPROTKB|P28701 - symbol:RXRG "Retinoic acid receptor RX... 273 2.5e-23 1
RGD|3200 - symbol:Nr2c1 "nuclear receptor subfamily 2, gr... 276 2.7e-23 1
UNIPROTKB|Q26622 - symbol:SHR2 "Orphan steroid hormone re... 274 4.3e-23 1
UNIPROTKB|F1NW94 - symbol:NR2C1 "Uncharacterized protein"... 273 5.0e-23 1
MGI|MGI:1352465 - symbol:Nr2c1 "nuclear receptor subfamil... 273 5.7e-23 1
UNIPROTKB|F8VNP5 - symbol:RXRB "Retinoic acid receptor RX... 265 6.1e-23 1
ZFIN|ZDB-GENE-980526-36 - symbol:rxrga "retinoid x recept... 268 6.8e-23 1
UNIPROTKB|E1BZA2 - symbol:NR2C1 "Uncharacterized protein"... 273 7.0e-23 1
UNIPROTKB|F8VZR5 - symbol:RXRB "Retinoic acid receptor RX... 263 1.0e-22 1
WARNING: Descriptions of 237 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015381 [details] [associations]
symbol:dsf "dissatisfaction" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0018993
"somatic sex determination" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0007530 "sex determination" evidence=TAS]
[GO:0007619 "courtship behavior" evidence=NAS;TAS] [GO:0007617
"mating behavior" evidence=NAS] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA;NAS] [GO:0007620 "copulation"
evidence=NAS] [GO:0018991 "oviposition" evidence=NAS;TAS]
[GO:0045924 "regulation of female receptivity" evidence=NAS]
[GO:0008049 "male courtship behavior" evidence=TAS] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0048047 "mating
behavior, sex discrimination" evidence=TAS] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0018991
GO:GO:0046872 GO:GO:0004879 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045924 GO:GO:0008049 GO:GO:0035206
GO:GO:0048047 GO:GO:0007620 GO:GO:0018993 HSSP:P19793 EMBL:AF106677
ProteinModelPortal:O96680 SMR:O96680 STRING:O96680 PRIDE:O96680
FlyBase:FBgn0015381 eggNOG:NOG242640 InParanoid:O96680
OrthoDB:EOG4MW6NV ArrayExpress:O96680 Bgee:O96680 Uniprot:O96680
Length = 693
Score = 707 (253.9 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 140/196 (71%), Positives = 159/196 (81%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
L+S E QETTARLLFMAVRWV+CL PFQTLSK DQ LLLQESWKELFLL+LAQW+IP D
Sbjct: 493 LLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPLD 552
Query: 145 LSLLINCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPG 204
L+ ++ RER+ D+ E+K IQEIL RFRQ++PDGSE GCMKA+ LF PET G
Sbjct: 553 LTPILESPLIRERVLQDEA-TQTEMKTIQEILCRFRQITPDGSEVGCMKAIALFAPETAG 611
Query: 205 LVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETI 264
L D QPVEMLQDQAQCIL D+VR RY RQ TRFGRLLL+LPSLR +R +TIE LFFKETI
Sbjct: 612 LCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATIEALFFKETI 671
Query: 265 GDIPIQRLLGDMYTME 280
G++PI RLL DMYTME
Sbjct: 672 GNVPIARLLRDMYTME 687
Score = 314 (115.6 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 62/80 (77%), Positives = 68/80 (85%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
ET GL D QPVEMLQDQAQCIL D+VR RY RQ TRFGRLLL+LPSLR +R +TIE LFF
Sbjct: 608 ETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATIEALFF 667
Query: 344 KETIGDIPIQRLLGDMYTME 363
KETIG++PI RLL DMYTME
Sbjct: 668 KETIGNVPIARLLRDMYTME 687
Score = 82 (33.9 bits), Expect = 1.8e-76, Sum P(2) = 1.8e-76
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 1 VQHERGPRKPKIH---NAHHQDSKLEPHNPHHS 30
VQHERGPRKPK+H + HH + HH+
Sbjct: 87 VQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHA 119
Score = 58 (25.5 bits), Expect = 1.9e-37, Sum P(3) = 1.9e-37
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLL---LLQESWKELFLLHL 136
G L++L+S +KCQE L+ V+ L P Q L R LL +LQE+ L + +
Sbjct: 458 GFLELLLSPDKCQE----LIQYQVQHNTLLFPQQLLDSR--LLSWEMLQETTARLLFMAV 511
Query: 137 AQW 139
+W
Sbjct: 512 -RW 513
>UNIPROTKB|F1ML62 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 UniGene:Bt.241 CTD:10002
KO:K08546 OMA:MLSQHTK GO:GO:0045872 EMBL:DAAA02027989
IPI:IPI01028398 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926
GeneID:281944 KEGG:bta:281944 NextBio:20805821 Uniprot:F1ML62
Length = 411
Score = 435 (158.2 bits), Expect = 4.2e-47, Sum P(3) = 4.2e-47
Identities = 88/191 (46%), Positives = 126/191 (65%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
+ ET+ARLLFMAV+W + L F L RDQ++LL+E+W ELFLL QWS+P D L
Sbjct: 219 DSIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDNCPL 278
Query: 149 INCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
+ +A V + E +++QE ++RFR L+ D +E CMKA++LF PET GL
Sbjct: 279 LALPEASAGGSSQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLK 338
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D + VE LQDQ+Q +L + + + QP RFG+LLL+LPSLR + +E LFF++TIG+
Sbjct: 339 DPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFISSERVELLFFRKTIGN 398
Query: 267 IPIQRLLGDMY 277
P+++LL DM+
Sbjct: 399 TPMEKLLCDMF 409
Score = 210 (79.0 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 51/123 (41%), Positives = 73/123 (59%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
GRL+L R + Q TI R F+ D P + + K ET GL D + VE L
Sbjct: 292 GRLVLASAETR-ILQETISR--FRALAVD-PTEFACMKALVLFKP-ETRGLKDPEHVEAL 346
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +L + + + QP RFG+LLL+LPSLR + +E LFF++TIG+ P+++LL
Sbjct: 347 QDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFISSERVELLFFRKTIGNTPMEKLLC 406
Query: 358 DMY 360
DM+
Sbjct: 407 DMF 409
Score = 48 (22.0 bits), Expect = 4.2e-47, Sum P(3) = 4.2e-47
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 1 VQHERGPRKPKIHNAHHQDSKLEPH-NPHHSPDLL--P----PNGISSVK-IPPTVLYPP 52
VQ+ER PR +S+ EP P +P L P P +S+ + + P L PP
Sbjct: 110 VQNERQPRSTAQVRMDSVESETEPRLQPLATPPALAGPSSRGPTPVSAARALGPQALMPP 169
Score = 38 (18.4 bits), Expect = 4.2e-47, Sum P(3) = 4.2e-47
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 75 PPPHPGLLQILMSAEKC 91
PP H + L++AE C
Sbjct: 168 PPGHHHFMASLITAETC 184
>UNIPROTKB|Q9TTF0 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 HSSP:P19793
eggNOG:NOG277339 EMBL:AF107729 IPI:IPI00954760 UniGene:Bt.241
STRING:Q9TTF0 InParanoid:Q9TTF0 OrthoDB:EOG41C6WF Uniprot:Q9TTF0
Length = 411
Score = 425 (154.7 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 87/191 (45%), Positives = 125/191 (65%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
+ ET+ARLLFMAV+W + L F L RDQ++LL+E+W ELFLL QWS+P D L
Sbjct: 219 DSIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPLDNCPL 278
Query: 149 INCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
+ +A V + E +++QE ++RFR L+ D +E CMKA++LF PET GL
Sbjct: 279 LALPEASAGGSSQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLK 338
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D + VE LQDQ+Q +L + + + Q RFG+LLL+LPSLR + +E LFF++TIG+
Sbjct: 339 DPEHVEALQDQSQVMLSQHSKAHHPSQLVRFGKLLLLLPSLRFISSERVELLFFRKTIGN 398
Query: 267 IPIQRLLGDMY 277
P+++LL DM+
Sbjct: 399 TPMEKLLCDMF 409
Score = 200 (75.5 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 50/123 (40%), Positives = 72/123 (58%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
GRL+L R + Q TI R F+ D P + + K ET GL D + VE L
Sbjct: 292 GRLVLASAETR-ILQETISR--FRALAVD-PTEFACMKALVLFKP-ETRGLKDPEHVEAL 346
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +L + + + Q RFG+LLL+LPSLR + +E LFF++TIG+ P+++LL
Sbjct: 347 QDQSQVMLSQHSKAHHPSQLVRFGKLLLLLPSLRFISSERVELLFFRKTIGNTPMEKLLC 406
Query: 358 DMY 360
DM+
Sbjct: 407 DMF 409
Score = 48 (22.0 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 1 VQHERGPRKPKIHNAHHQDSKLEPH-NPHHSPDLL--P----PNGISSVK-IPPTVLYPP 52
VQ+ER PR +S+ EP P +P L P P +S+ + + P L PP
Sbjct: 110 VQNERQPRSTAQVRMDSVESETEPRLQPLATPPALAGPSSRGPTPVSAARALGPQALMPP 169
Score = 38 (18.4 bits), Expect = 4.6e-46, Sum P(3) = 4.6e-46
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 75 PPPHPGLLQILMSAEKC 91
PP H + L++AE C
Sbjct: 168 PPGHHHFMASLITAETC 184
>MGI|MGI:1100526 [details] [associations]
symbol:Nr2e1 "nuclear receptor subfamily 2, group E, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0001662 "behavioral fear response" evidence=IMP] [GO:0002118
"aggressive behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007610
"behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021764
"amygdala development" evidence=IMP] [GO:0021772 "olfactory bulb
development" evidence=IMP] [GO:0021819 "layer formation in cerebral
cortex" evidence=IMP] [GO:0021872 "forebrain generation of neurons"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0045766 "positive
regulation of angiogenesis" evidence=IMP] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IMP] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IMP] [GO:0051128 "regulation of cellular component
organization" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060164 "regulation of timing of
neuron differentiation" evidence=IMP] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0090049 "regulation of
cell migration involved in sprouting angiogenesis" evidence=IMP]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1100526 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0003677 GO:GO:0060291
GO:GO:0007601 GO:GO:0001078 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045665 GO:GO:0045766 GO:GO:0001077
GO:GO:0048814 GO:GO:0060041 GO:GO:0035176 GO:GO:0035019
GO:GO:0001662 GO:GO:0045165 GO:GO:0008347 GO:GO:0045787
GO:GO:2000179 GO:GO:0048712 GO:GO:0021960 GO:GO:0021542
GO:GO:2000178 GO:GO:0002118 GO:GO:0021772 GO:GO:0021819
HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895
GO:GO:0060164 eggNOG:NOG277339 KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 EMBL:S77482 EMBL:BC057104
IPI:IPI00131076 RefSeq:NP_689415.1 UniGene:Mm.287100
ProteinModelPortal:Q64104 SMR:Q64104 DIP:DIP-46432N STRING:Q64104
PhosphoSite:Q64104 PRIDE:Q64104 Ensembl:ENSMUST00000019938
GeneID:21907 KEGG:mmu:21907 InParanoid:Q64104 OMA:ILLEDAW
NextBio:301450 Bgee:Q64104 CleanEx:MM_NR2E1 Genevestigator:Q64104
GermOnline:ENSMUSG00000019803 Uniprot:Q64104
Length = 385
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 117/301 (38%), Positives = 168/301 (55%)
Query: 1 VQHERGPRKPKIHN-------AHHQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYPPS 53
VQHERGPR I H +D+ H P S L P ++V T L P
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEDNGAAAHFP--STALPAPAFFTAV----TQL-EPH 140
Query: 54 GLKXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWV 106
GL+ ++ QP P +P G L ++ E E+ ARLLFM+++W
Sbjct: 141 GLELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWA 200
Query: 107 RCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN 166
+ + F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 201 KSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNTDNTDSQKLN 259
Query: 167 ---NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQD 216
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD
Sbjct: 260 KIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQD 319
Query: 217 QAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DM
Sbjct: 320 EAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDM 379
Query: 277 Y 277
Y
Sbjct: 380 Y 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 115/301 (38%), Positives = 166/301 (55%)
Query: 1 VQHERGPRKPKIHN-------AHHQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYPPS 53
VQHERGPR I H ++S PH P + L P ++V P
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEESSGAPHFP--ATALPAPAFFTAVS-----QLEPH 140
Query: 54 GLKXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWV 106
GL+ + QP P +P G L ++ E E+ ARLLFM+++W
Sbjct: 141 GLELAAVAGTPERQALVGLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWA 200
Query: 107 RCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN 166
+ + F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 201 KSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLN 259
Query: 167 ---NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQD 216
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD
Sbjct: 260 KIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQD 319
Query: 217 QAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DM
Sbjct: 320 EAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDM 379
Query: 277 Y 277
Y
Sbjct: 380 Y 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|F1P0M4 [details] [associations]
symbol:NR2E3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0045872 "positive regulation of
rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0030522 OMA:MLSQHTK EMBL:AADN02051066 IPI:IPI00600137
Ensembl:ENSGALT00000003264 Uniprot:F1P0M4
Length = 405
Score = 432 (157.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 94/206 (45%), Positives = 130/206 (63%)
Query: 73 HQPPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELF 132
+Q P+P E ET+ LLFMAV+W + L F L RDQ++LL+E+W ELF
Sbjct: 207 YQVAPYPAA-----GPENVYETSPLLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELF 261
Query: 133 LLHLAQWSIPWD-LSLLINCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGC 191
LL QWS+P + LL E + +L P V +++ +QE L RF+ L+ D +E C
Sbjct: 262 LLCAIQWSMPLESCPLLAVPEPSPGKLLPAAV----DVRALQETLGRFKALAVDPTEFAC 317
Query: 192 MKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVR 251
MKAV+LF PET GL D + VE LQDQ+Q +LG + R Y QP RFG+LLL+LP+LR +
Sbjct: 318 MKAVVLFKPETRGLKDPEQVENLQDQSQVMLGQHNRSHYPGQPVRFGKLLLLLPALRFLS 377
Query: 252 QSTIERLFFKETIGDIPIQRLLGDMY 277
+E LFF+ TIG+ P+++LL DM+
Sbjct: 378 SERVELLFFRRTIGNTPMEKLLCDMF 403
Score = 214 (80.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 53/123 (43%), Positives = 74/123 (60%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
G+LL +RA+ Q T+ R FK D P + + K ET GL D + VE L
Sbjct: 286 GKLLPAAVDVRAL-QETLGR--FKALAVD-PTEFACMKAVVLFKP-ETRGLKDPEQVENL 340
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +LG + R Y QP RFG+LLL+LP+LR + +E LFF+ TIG+ P+++LL
Sbjct: 341 QDQSQVMLGQHNRSHYPGQPVRFGKLLLLLPALRFLSSERVELLFFRRTIGNTPMEKLLC 400
Query: 358 DMY 360
DM+
Sbjct: 401 DMF 403
Score = 49 (22.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 34 LPPNGISSVK-IPPTVLYPPSGLKXXXXXXXXXXXMFLATHQPPPHPGLLQILMSAEKC 91
LPP +++ + +PP P G T PP + + LM+AE C
Sbjct: 129 LPPEHVAATRDVPPVPCPAPRG-----HGATAATAAVPRTPTPPTNHRFMASLMTAETC 182
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-DPHGL 142
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 143 ELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 202
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 203 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 261
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 262 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 321
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 322 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-EPHGL 142
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 143 ELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 202
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 203 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 261
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 262 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 321
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 322 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|Q6ZMP8 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2, group E, member
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 EMBL:CH471051 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:AL078596 UniGene:Hs.157688 HGNC:HGNC:7973
OMA:ILLEDAW HSSP:P20393 EMBL:AK131541 IPI:IPI00000354 SMR:Q6ZMP8
STRING:Q6ZMP8 Ensembl:ENST00000368983 Uniprot:Q6ZMP8
Length = 422
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 125 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-EPHGL 179
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 180 ELAAVSTTPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 239
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 240 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 298
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 299 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 358
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 359 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 417
Score = 214 (80.4 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 347 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 406
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 407 VPITRLLSDMY 417
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-EPHGL 142
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 143 ELAAVSTTPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 202
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 203 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 261
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 262 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 321
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 322 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|F1RT26 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:CU469092 Ensembl:ENSSSCT00000004846
Uniprot:F1RT26
Length = 421
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 124 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-EPHGL 178
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 179 ELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 238
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 239 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 297
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 298 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 357
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 358 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 416
Score = 214 (80.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 346 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 405
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 406 VPITRLLSDMY 416
>UNIPROTKB|I3LU21 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:CU469092
RefSeq:XP_003353327.1 ProteinModelPortal:I3LU21
Ensembl:ENSSSCT00000022342 GeneID:100155153 KEGG:ssc:100155153
Uniprot:I3LU21
Length = 385
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 117/299 (39%), Positives = 168/299 (56%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDL-LP-PNGISSVKIPPTVLYPPSGL 55
VQHERGPR I + + K E H P LP P ++V T L P GL
Sbjct: 88 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAV----TQL-EPHGL 142
Query: 56 KXXXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRC 108
+ ++ QP P +P G L ++ E E+ ARLLFM+++W +
Sbjct: 143 ELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKS 202
Query: 109 LAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN-- 166
+ F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ D ++N
Sbjct: 203 VPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKI 261
Query: 167 -NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQA 218
+EI+ +QE++ARFRQL D +E C+K ++ F P G +A + LQD+A
Sbjct: 262 ISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEA 321
Query: 219 QCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Q L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 322 QLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 380
Score = 214 (80.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 310 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 369
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 370 VPITRLLSDMY 380
>UNIPROTKB|F1SIS0 [details] [associations]
symbol:F1SIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045872
"positive regulation of rhodopsin gene expression" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 OMA:MLSQHTK GO:GO:0045872
EMBL:CU570658 Ensembl:ENSSSCT00000005490 Uniprot:F1SIS0
Length = 419
Score = 434 (157.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 88/191 (46%), Positives = 129/191 (67%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD-LSL 147
+ ET+ARLLFMAV+W + L F +L RDQ++LL+E+W ELFLL QWS+P D L
Sbjct: 228 DSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPL 287
Query: 148 LINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
L+ E + + + + E +++QE ++RFR L+ D +E CMKA++LF PET GL
Sbjct: 288 LVPPEASAAGSSQGRLALASAETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLK 347
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D + VE LQDQ+Q +L + + + QP RFG+LLL+LPSLR + +E LFF++TIG+
Sbjct: 348 DPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTSERVELLFFRKTIGN 407
Query: 267 IPIQRLLGDMY 277
P+++LL DM+
Sbjct: 408 TPMEKLLCDMF 418
Score = 207 (77.9 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
GRL L R V Q TI R F+ D P + + K ET GL D + VE L
Sbjct: 301 GRLALASAETR-VLQETISR--FRALAVD-PTEFACMKALVLFKP-ETRGLKDPEHVEAL 355
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +L + + + QP RFG+LLL+LPSLR + +E LFF++TIG+ P+++LL
Sbjct: 356 QDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTSERVELLFFRKTIGNTPMEKLLC 415
Query: 358 DMY 360
DM+
Sbjct: 416 DMF 418
Score = 38 (18.4 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 75 PPPHPGLLQILMSAEKC 91
PP H + L++AE C
Sbjct: 176 PPGHHHFMASLITAETC 192
>ZFIN|ZDB-GENE-040801-127 [details] [associations]
symbol:nr2e1 "nuclear receptor subfamily 2, group
E, member 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040801-127 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GeneTree:ENSGT00700000104390 eggNOG:NOG277339
KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q OMA:ILLEDAW EMBL:CU138515
EMBL:BC077146 EMBL:EF010862 IPI:IPI00504614 RefSeq:NP_001003608.1
UniGene:Dr.78647 STRING:Q6DEH0 Ensembl:ENSDART00000026635
GeneID:445214 KEGG:dre:445214 NextBio:20831976 Uniprot:Q6DEH0
Length = 396
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 113/297 (38%), Positives = 159/297 (53%)
Query: 1 VQHERGPRKPKIHNA---HHQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYPPSGLKX 57
VQHERGPR I + + K + H P P + T L P L+
Sbjct: 99 VQHERGPRTSTIRKQVALYFRGHKEVNGSSTHFPSTSIPGPPFFTTV--TQL-EPHNLEL 155
Query: 58 XXXXXXXXXXMFLATHQPPP-HP----GLLQIL--MSAEKCQETTARLLFMAVRWVRCLA 110
+ QP P +P G L ++ E E+ ARLLFM+++W + +
Sbjct: 156 NTVTSTPERQAIVGLAQPTPKYPHEVSGTPMYLYEVATESVCESAARLLFMSIKWAKSVP 215
Query: 111 PFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN---N 167
F TL DQL+LL+++W+ELF+L +AQW+IP D S L+ D R+N +
Sbjct: 216 AFSTLPLPDQLILLEDAWRELFVLGIAQWAIPVDSSTLLAVSGMNTE-NTDSQRLNKIIS 274
Query: 168 EIKLIQEILARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQAQC 220
EI+ +QE++ RFRQL D +E C+K ++ F P G +A + LQD+AQ
Sbjct: 275 EIQALQEVVTRFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNASAIAALQDEAQL 334
Query: 221 ILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
L Y+ RY QP RFG+LLL+LP+LR+V STIE +FFK+TIG++PI RLL DMY
Sbjct: 335 TLNSYIHTRYPTQPCRFGKLLLLLPALRSVGPSTIEEVFFKKTIGNVPITRLLSDMY 391
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 41/71 (57%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR+V STIE +FFK+TIG+
Sbjct: 321 NASAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSVGPSTIEEVFFKKTIGN 380
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 381 VPITRLLSDMY 391
>UNIPROTKB|F1Q176 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:AAEX03008592
Ensembl:ENSCAFT00000035327 Uniprot:F1Q176
Length = 412
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 95/222 (42%), Positives = 139/222 (62%)
Query: 70 LATHQPP----PHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQ 125
LAT+ P P L + + E E+ ARLLFM+++W + + F TLS +DQL+LL+
Sbjct: 192 LATNVDPLAQSPKESLCTV--ATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLE 249
Query: 126 ESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN---NEIKLIQEILARFRQL 182
++W+ELF+L +AQW+IP D + L+ D ++N +EI+ +QE++ARFRQL
Sbjct: 250 DAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKIISEIQALQEVVARFRQL 308
Query: 183 SPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQAQCILGDYVRGRYSRQPT 235
D +E C+K ++ F P G +A + LQD+AQ L Y+ RY QP
Sbjct: 309 RLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPC 368
Query: 236 RFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 369 RFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 410
Score = 214 (80.4 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 340 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 399
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 400 VPITRLLSDMY 410
Score = 188 (71.2 bits), Expect = 4.5e-31, Sum P(2) = 4.5e-31
Identities = 60/195 (30%), Positives = 90/195 (46%)
Query: 1 VQHERGPRKPKIHN-------AHHQDSKLEPHNPHHS---PDL------LPPNGISSVKI 44
VQHERGPR I H +++ H P + P L P+G+ +
Sbjct: 110 VQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPHGLELAAV 169
Query: 45 PPTVLYPPSGLKXXXXXXXXXXXMFLATHQPP--PHPGLLQILMSAEKCQETTARLLFMA 102
T P LAT+ P P ++ E E+ ARLLFM+
Sbjct: 170 SAT---PERQTLVSLAQPTPKSLSELATNVDPLAQSPKESLCTVATESVCESAARLLFMS 226
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDD 162
++W + + F TLS +DQL+LL+++W+ELF+L +AQW+IP D + L+ A + D+
Sbjct: 227 IKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLL----AVSGMNGDN 282
Query: 163 VRVNNEIKLIQEILA 177
K+I EI A
Sbjct: 283 TDSQKLNKIISEIQA 297
>MGI|MGI:1346317 [details] [associations]
symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive
regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0008285
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0030522
GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606
eggNOG:NOG277339 OrthoDB:EOG41C6WF CTD:10002 KO:K08546
EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 IPI:IPI00135703
RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7
SMR:Q9QXZ7 STRING:Q9QXZ7 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7
Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958
InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 Bgee:Q9QXZ7
CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7
GermOnline:ENSMUSG00000032292 GO:GO:0045872 Uniprot:Q9QXZ7
Length = 395
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 88/191 (46%), Positives = 125/191 (65%)
Query: 87 SAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLS 146
S + ET+ARLLFMAV+W + L F L RDQ++LL+E+W ELFLL QWS+P D
Sbjct: 203 SLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWNELFLLGAIQWSLPLDSC 262
Query: 147 LLINCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
L+ +A + E + +QE ++RFR L+ D +E C+KA++LF PET GL
Sbjct: 263 PLLAPPEASGSSQGRLALASAETRFLQETISRFRALAVDPTEFACLKALVLFKPETRGLK 322
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D + VE LQDQ+Q +L + + + QP RFG+LLL+LPSLR + IE LFF++TIG+
Sbjct: 323 DPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTAERIELLFFRKTIGN 382
Query: 267 IPIQRLLGDMY 277
P+++LL DM+
Sbjct: 383 TPMEKLLCDMF 393
Score = 203 (76.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 52/123 (42%), Positives = 72/123 (58%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
GRL L R + Q TI R F+ D P + + K ET GL D + VE L
Sbjct: 276 GRLALASAETRFL-QETISR--FRALAVD-PTEFACLKALVLFKP-ETRGLKDPEHVEAL 330
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +L + + + QP RFG+LLL+LPSLR + IE LFF++TIG+ P+++LL
Sbjct: 331 QDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTAERIELLFFRKTIGNTPMEKLLC 390
Query: 358 DMY 360
DM+
Sbjct: 391 DMF 393
>UNIPROTKB|Q9Y5X4 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007602 "phototransduction"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602
HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339
OrthoDB:EOG41C6WF EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674
IPI:IPI00001888 IPI:IPI00215922 RefSeq:NP_055064.1
RefSeq:NP_057430.1 UniGene:Hs.187354 ProteinModelPortal:Q9Y5X4
SMR:Q9Y5X4 MINT:MINT-4302911 STRING:Q9Y5X4 PhosphoSite:Q9Y5X4
DMDM:8928275 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002
UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974
MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540
PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 BindingDB:Q9Y5X4
ChEMBL:CHEMBL4374 GenomeRNAi:10002 NextBio:37775 CleanEx:HS_NR2E3
Genevestigator:Q9Y5X4 GermOnline:ENSG00000031544 Uniprot:Q9Y5X4
Length = 410
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 88/191 (46%), Positives = 126/191 (65%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
+ ET+ARLLFMAV+W + L F +L RDQ++LL+E+W ELFLL QWS+P D L
Sbjct: 218 DSIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPLDSCPL 277
Query: 149 INCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
+ +A + E +++QE ++RFR L+ D +E CMKA++LF PET GL
Sbjct: 278 LAPPEASAAGGAQGRLTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLK 337
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D + VE LQDQ+Q +L + + + QP RFG+LLL+LPSLR + IE LFF++TIG+
Sbjct: 338 DPEHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGN 397
Query: 267 IPIQRLLGDMY 277
P+++LL DM+
Sbjct: 398 TPMEKLLCDMF 408
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 53/123 (43%), Positives = 72/123 (58%)
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEML 297
GRL L R V Q TI R F+ D P + + K ET GL D + VE L
Sbjct: 291 GRLTLASMETR-VLQETISR--FRALAVD-PTEFACMKALVLFKP-ETRGLKDPEHVEAL 345
Query: 298 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 357
QDQ+Q +L + + + QP RFG+LLL+LPSLR + IE LFF++TIG+ P+++LL
Sbjct: 346 QDQSQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLC 405
Query: 358 DMY 360
DM+
Sbjct: 406 DMF 408
>FB|FBgn0034012 [details] [associations]
symbol:Hr51 "Hormone receptor 51" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003707 "steroid
hormone receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0020037 "heme binding" evidence=IDA]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0020037 GO:GO:0016319 GO:GO:0048526
eggNOG:NOG277339 KO:K08546 OMA:MLSQHTK EMBL:BT122090
RefSeq:NP_611032.2 UniGene:Dm.16048 SMR:A1ZA01 STRING:A1ZA01
EnsemblMetazoa:FBtr0114456 GeneID:36702 KEGG:dme:Dmel_CG16801
CTD:36702 FlyBase:FBgn0034012 InParanoid:A1ZA01 OrthoDB:EOG4NCJVD
GenomeRNAi:36702 NextBio:799957 Uniprot:A1ZA01
Length = 582
Score = 402 (146.6 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 84/199 (42%), Positives = 120/199 (60%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD---- 144
E ET+ARLLFMAV+W + L F LS RDQ++LL+ESW ELFLL+ QW IP D
Sbjct: 382 ETVYETSARLLFMAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGC 441
Query: 145 --LSLLINCEKARERLPPDDVRVNNE----IKLIQEILARFRQLSPDGSECGCMKAVILF 198
S+ +C D E ++ + EI +++ + D +E C+KA++LF
Sbjct: 442 ALFSVAEHCNNLENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVLF 501
Query: 199 TPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 258
PET GL D +E LQDQA +L + + +++ Q RFGRLLLMLP LR + IE +
Sbjct: 502 RPETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHKIESI 561
Query: 259 FFKETIGDIPIQRLLGDMY 277
+F+ TIG+ P++++L DMY
Sbjct: 562 YFQRTIGNTPMEKVLCDMY 580
Score = 184 (69.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
ET GL D +E LQDQA +L + + +++ Q RFGRLLLMLP LR + IE ++F
Sbjct: 504 ETRGLKDPAQIENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHKIESIYF 563
Query: 344 KETIGDIPIQRLLGDMY 360
+ TIG+ P++++L DMY
Sbjct: 564 QRTIGNTPMEKVLCDMY 580
Score = 40 (19.1 bits), Expect = 7.2e-40, Sum P(2) = 7.2e-40
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 72 THQPPPHP 79
T PPPHP
Sbjct: 48 TQPPPPHP 55
>ZFIN|ZDB-GENE-041114-63 [details] [associations]
symbol:nr2e3 "nuclear receptor subfamily 2, group E,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL929050
IPI:IPI00511770 ProteinModelPortal:F1QGF3
Ensembl:ENSDART00000127099 ArrayExpress:F1QGF3 Bgee:F1QGF3
Uniprot:F1QGF3
Length = 426
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 85/189 (44%), Positives = 121/189 (64%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
E ET+ARLLFM+V+W + L F L RDQ++LL+E+W ELFLL QWS+P D L
Sbjct: 236 ESVYETSARLLFMSVKWAKNLPVFSHLPFRDQVILLEEAWSELFLLCAIQWSLPLDNCPL 295
Query: 149 INCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
++ ++++++QE+ +RF+ L D +E C+KA++LF PET GL D
Sbjct: 296 LSLPDLSPTGQGKGSPSASDVRVLQEVFSRFKPLQVDPTEFACLKAIVLFKPETRGLKDP 355
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIP 268
+ VE LQDQ+Q +L ++ Y Q RFGRLLL+LPSL V IE LFF+ TIG+ P
Sbjct: 356 EQVENLQDQSQVLLAQHIHTLYPSQVARFGRLLLLLPSLHFVSSERIEHLFFQRTIGNTP 415
Query: 269 IQRLLGDMY 277
+++LL DM+
Sbjct: 416 MEKLLCDMF 424
Score = 196 (74.1 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
ET GL D + VE LQDQ+Q +L ++ Y Q RFGRLLL+LPSL V IE LFF
Sbjct: 348 ETRGLKDPEQVENLQDQSQVLLAQHIHTLYPSQVARFGRLLLLLPSLHFVSSERIEHLFF 407
Query: 344 KETIGDIPIQRLLGDMY 360
+ TIG+ P+++LL DM+
Sbjct: 408 QRTIGNTPMEKLLCDMF 424
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 385 (140.6 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 220 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 279
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 280 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 339
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 340 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 399
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 400 LVGKTPIETLIRDMLLSGSSFNWP 423
Score = 209 (78.6 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 341 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 400
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 401 VGKTPIETLIRDMLLSGSSF 420
Score = 39 (18.8 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 8 RKPKIHNAHHQDSKLEPHNPHHSPDLLPPNG 38
R+ + A Q ++ P PHH L NG
Sbjct: 154 REVSLFTAAVQRGRMPPTQPHHGQFALT-NG 183
>UNIPROTKB|F1NAB6 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001937 "negative regulation of
endothelial cell proliferation" evidence=IEA] [GO:0001972 "retinoic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0009566 "fertilization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009956 "radial pattern formation" evidence=IEA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282
SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0001937 GO:GO:0045736 GO:GO:0010596 GO:GO:0001972
EMBL:AADN02039138 EMBL:AADN02039139 EMBL:AADN02039140
IPI:IPI00577253 Ensembl:ENSGALT00000023630 OMA:CINNIAL
ArrayExpress:F1NAB6 Uniprot:F1NAB6
Length = 281
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 73 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 132
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 133 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 192
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 193 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 252
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 253 LVGKTPIETLIRDMLLSGSSFNWP 276
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 194 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 253
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 254 VGKTPIETLIRDMLLSGSSF 273
>UNIPROTKB|F1NGT1 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001937 "negative regulation of
endothelial cell proliferation" evidence=IEA] [GO:0001972 "retinoic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0009566 "fertilization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009956 "radial pattern formation" evidence=IEA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282
SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0001937 GO:GO:0045736 GO:GO:0010596 GO:GO:0001972
IPI:IPI00598209 EMBL:AADN02039138 EMBL:AADN02039139
EMBL:AADN02039140 Ensembl:ENSGALT00000011332 ArrayExpress:F1NGT1
Uniprot:F1NGT1
Length = 267
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 59 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 118
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 119 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 178
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 179 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 238
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 239 LVGKTPIETLIRDMLLSGSSFNWP 262
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 180 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 239
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 240 VGKTPIETLIRDMLLSGSSF 259
>UNIPROTKB|F1NJL8 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:AADN02039138
EMBL:AADN02039139 EMBL:AADN02039140 IPI:IPI00683443
Ensembl:ENSGALT00000033927 ArrayExpress:F1NJL8 Uniprot:F1NJL8
Length = 269
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 61 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 120
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 121 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 180
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 181 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 240
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 241 LVGKTPIETLIRDMLLSGSSFNWP 264
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 182 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 241
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 242 VGKTPIETLIRDMLLSGSSF 261
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 202 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 261
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 262 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 321
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 322 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 381
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 382 LVGKTPIETLIRDMLLSGSSFNWP 405
Score = 209 (78.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 323 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 382
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 383 VGKTPIETLIRDMLLSGSSF 402
>UNIPROTKB|A4IFS2 [details] [associations]
symbol:NR2F2 "NR2F2 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 UniGene:Bt.53763
EMBL:DAAA02051822 EMBL:DAAA02051823 EMBL:BC134735 IPI:IPI00908251
STRING:A4IFS2 Ensembl:ENSBTAT00000056488 Uniprot:A4IFS2
Length = 281
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 73 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 132
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 133 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 192
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 193 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 252
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 253 LVGKTPIETLIRDMLLSGSSFNWP 276
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 194 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 253
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 254 VGKTPIETLIRDMLLSGSSF 273
>UNIPROTKB|Q9TTR7 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9913
"Bos taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0001972 "retinoic acid binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0060849
"regulation of transcription involved in lymphatic endothelial cell
fate commitment" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IEA] [GO:0045736 "negative regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0001937 "negative regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
OrthoDB:EOG4MGS7H EMBL:AJ249441 EMBL:BC123677 IPI:IPI00695873
PIR:JH0787 RefSeq:NP_776827.1 UniGene:Bt.53763
ProteinModelPortal:Q9TTR7 SMR:Q9TTR7 STRING:Q9TTR7
Ensembl:ENSBTAT00000023969 GeneID:281945 KEGG:bta:281945 CTD:7026
InParanoid:Q9TTR7 KO:K08548 OMA:GPPNNTQ NextBio:20805822
ArrayExpress:Q9TTR7 GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
Uniprot:Q9TTR7
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>UNIPROTKB|F1PX81 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 OMA:GPPNNTQ
EMBL:AAEX03002267 Ensembl:ENSCAFT00000017350 Uniprot:F1PX81
Length = 420
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 212 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 271
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 272 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 331
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 332 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 391
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 392 LVGKTPIETLIRDMLLSGSSFNWP 415
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 333 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 392
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 393 VGKTPIETLIRDMLLSGSSF 412
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>UNIPROTKB|B5A7P0 [details] [associations]
symbol:Nr2f2 "Orphan nuclear receptor COUP-TFII"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282 SMART:SM00430
GO:GO:0005634 GO:GO:0003677 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026
KO:K08548 EMBL:CU407120 EMBL:EU822301 RefSeq:NP_001177181.1
RefSeq:NP_001177182.1 UniGene:Ssc.8676 ProteinModelPortal:B5A7P0
SMR:B5A7P0 PRIDE:B5A7P0 Ensembl:ENSSSCT00000002510 GeneID:100153983
KEGG:ssc:100153983 Uniprot:B5A7P0
Length = 281
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 73 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 132
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 133 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 192
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 193 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 252
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 253 LVGKTPIETLIRDMLLSGSSFNWP 276
Score = 209 (78.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 194 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 253
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 254 VGKTPIETLIRDMLLSGSSF 273
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 118/204 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 386 LVGKTPIETLIRDMLLSGSSFNWP 409
Score = 209 (78.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 42/80 (52%), Positives = 53/80 (66%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRL 386
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 387 VGKTPIETLIRDMLLSGSSF 406
>UNIPROTKB|A6QPQ9 [details] [associations]
symbol:NR2F1 "NR2F1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522 UniGene:Bt.543
HOGENOM:HOG000260820 HOVERGEN:HBG005606 EMBL:DAAA02021281
EMBL:BC149438 IPI:IPI00839954 SMR:A6QPQ9 STRING:A6QPQ9
Ensembl:ENSBTAT00000043324 Uniprot:A6QPQ9
Length = 273
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 63 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 122
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 123 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 182
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 183 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 242
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 243 LVGKTPIETLIRDMLLSGSSFNWP 266
Score = 208 (78.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 184 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 243
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 244 VGKTPIETLIRDMLLSGSSF 263
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 143 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 202
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 203 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 262
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 263 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 322
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 323 LVGKTPIETLIRDMLLSGSSFNWP 346
Score = 208 (78.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 264 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 323
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 324 VGKTPIETLIRDMLLSGSSF 343
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 214 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 273
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 274 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 333
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 334 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 393
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 394 LVGKTPIETLIRDMLLSGSSFNWP 417
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 335 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 394
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 395 VGKTPIETLIRDMLLSGSSF 414
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 213 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 272
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 273 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 332
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 333 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 392
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 393 LVGKTPIETLIRDMLLSGSSFNWP 416
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 334 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 393
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 394 VGKTPIETLIRDMLLSGSSF 413
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 212 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 271
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 272 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 331
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 332 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 391
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 392 LVGKTPIETLIRDMLLSGSSFNWP 415
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 333 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 392
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 393 VGKTPIETLIRDMLLSGSSF 412
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 212 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 271
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 272 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 331
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 332 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 391
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 392 LVGKTPIETLIRDMLLSGSSFNWP 415
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 333 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 392
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 393 VGKTPIETLIRDMLLSGSSF 412
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 210 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 269
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 270 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 329
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 330 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 389
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 390 LVGKTPIETLIRDMLLSGSSFNWP 413
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 331 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 390
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 391 VGKTPIETLIRDMLLSGSSF 410
>ZFIN|ZDB-GENE-980526-115 [details] [associations]
symbol:nr2f1a "nuclear receptor subfamily 2, group
F, member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-115 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H
OMA:DKGQGQP EMBL:X70299 EMBL:CR751602 EMBL:BC056574 EMBL:BC066671
EMBL:U93463 IPI:IPI00499015 IPI:IPI00923775 IPI:IPI00923787
PIR:S35333 RefSeq:NP_571255.1 UniGene:Dr.16
ProteinModelPortal:Q06725 SMR:Q06725 Ensembl:ENSDART00000051263
Ensembl:ENSDART00000133384 GeneID:30418 KEGG:dre:30418 CTD:30418
InParanoid:O42536 NextBio:20806824 ArrayExpress:Q06725 Bgee:Q06725
Uniprot:Q06725
Length = 411
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 84/204 (41%), Positives = 119/204 (58%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 203 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLH 262
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 263 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDA 322
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 323 CGLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVR 382
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 383 LVGKTPIETLIRDMLLSGSSFNWP 406
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 41/80 (51%), Positives = 54/80 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL DA +E LQ+++QC L +YVR +Y QP+RFG+LLL LPSLR V S IE+LFF
Sbjct: 324 GLSDAAHIESLQEKSQCALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRL 383
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ L+ DM S+
Sbjct: 384 VGKTPIETLIRDMLLSGSSF 403
>UNIPROTKB|F1NTE7 [details] [associations]
symbol:F1NTE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008347 "glial cell
migration" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021764 "amygdala development" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021819
"layer formation in cerebral cortex" evidence=IEA] [GO:0021872
"forebrain generation of neurons" evidence=IEA] [GO:0021895
"cerebral cortex neuron differentiation" evidence=IEA] [GO:0021960
"anterior commissure morphogenesis" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045766 "positive regulation of
angiogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0048712 "negative regulation of
astrocyte differentiation" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0060164
"regulation of timing of neuron differentiation" evidence=IEA]
[GO:0060291 "long-term synaptic potentiation" evidence=IEA]
[GO:0090049 "regulation of cell migration involved in sprouting
angiogenesis" evidence=IEA] [GO:2000178 "negative regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000179
"positive regulation of neural precursor cell proliferation"
evidence=IEA] [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0043066
GO:GO:0003677 GO:GO:0007610 GO:GO:0060291 GO:GO:0004879
GO:GO:0001078 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045766 GO:GO:0001077 GO:GO:0030522
GO:GO:0045165 GO:GO:0045787 GO:GO:2000179 GO:GO:2000178
GO:GO:0051128 GO:GO:2000648 GeneTree:ENSGT00700000104390
GO:GO:0090049 EMBL:AADN02002100 EMBL:AADN02002101 IPI:IPI00822861
ProteinModelPortal:F1NTE7 Ensembl:ENSGALT00000037276 OMA:SAITCIV
Uniprot:F1NTE7
Length = 269
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 80/201 (39%), Positives = 123/201 (61%)
Query: 87 SAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLS 146
+++ C T+ L+ W + L+ + + QL+LL+++W+ELF+L +AQW+IP D +
Sbjct: 65 TSKACFSATSILILFRAGWFKTLSAITCIVSQHQLMLLEDAWRELFVLGIAQWAIPVDAN 124
Query: 147 LLINCEKARERLPPDDVRVN---NEIKLIQEILARFRQLSPDGSECGCMKAVILF--TPE 201
L+ D ++N +EI+ +QE++ARFRQL D +E C+K ++ F P
Sbjct: 125 TLL-AVSGMNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPT 183
Query: 202 TPG-----LVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIE 256
G +A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE
Sbjct: 184 HSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIE 243
Query: 257 RLFFKETIGDIPIQRLLGDMY 277
+FFK+TIG++PI RLL DMY
Sbjct: 244 EVFFKKTIGNVPITRLLSDMY 264
Score = 214 (80.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 194 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 253
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 254 VPITRLLSDMY 264
>ZFIN|ZDB-GENE-990415-253 [details] [associations]
symbol:nr2f5 "nuclear receptor subfamily 2, group
F, member 5" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-253 GO:GO:0005634
GO:GO:0046872 GO:GO:0007601 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:X70300 IPI:IPI00492421 PIR:S35334
RefSeq:NP_571261.1 UniGene:Dr.22 ProteinModelPortal:Q06726
SMR:Q06726 STRING:Q06726 Ensembl:ENSDART00000040769 GeneID:30427
KEGG:dre:30427 CTD:30427 InParanoid:Q06726 KO:K08702 OMA:HYNENGP
OrthoDB:EOG4JHCFP NextBio:20806829 ArrayExpress:Q06726 Bgee:Q06726
Uniprot:Q06726
Length = 403
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 86/205 (41%), Positives = 117/205 (57%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
LM E E ARLLF AV W + + F L DQ+ LL+ SW ELF+L+ AQ S+P
Sbjct: 181 LMGIENICELAARLLFSAVEWAKNIPFFPDLQLMDQVALLRMSWSELFVLNAAQCSMPLH 240
Query: 145 LSLLINCEKARERLPPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
++ L+ P RV + I++ QE + + + L D +E C+K+++LFT +
Sbjct: 241 VAPLL-AAAGLHASPMSAERVVAFMDHIRVFQEQVEKLKALQVDTAEYSCLKSIVLFTSD 299
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
GL D VE +Q+++QC L +YVR +Y QP RFGRLLL LPSLR V IE+LFF
Sbjct: 300 AMGLSDVAHVESIQEKSQCALEEYVRNQYPNQPNRFGRLLLRLPSLRIVSSPVIEQLFFV 359
Query: 262 ETIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ LL DM SY P
Sbjct: 360 RLVGKTPIETLLRDMLLSGSSYNWP 384
Score = 205 (77.2 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE +Q+++QC L +YVR +Y QP RFGRLLL LPSLR V IE+LFF
Sbjct: 302 GLSDVAHVESIQEKSQCALEEYVRNQYPNQPNRFGRLLLRLPSLRIVSSPVIEQLFFVRL 361
Query: 347 IGDIPIQRLLGDMYTMEKSY 366
+G PI+ LL DM SY
Sbjct: 362 VGKTPIETLLRDMLLSGSSY 381
>ZFIN|ZDB-GENE-040426-1438 [details] [associations]
symbol:nr2f1b "nuclear receptor subfamily 2, group
F, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-1438 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
EMBL:BC056748 EMBL:BC065651 IPI:IPI00482303 IPI:IPI00923764
RefSeq:NP_956886.1 UniGene:Dr.86046 HSSP:P19793
ProteinModelPortal:Q6PH18 SMR:Q6PH18 Ensembl:ENSDART00000027242
GeneID:393564 KEGG:dre:393564 CTD:393564 InParanoid:Q6PH18
OMA:MENIRIF NextBio:20814585 ArrayExpress:Q6PH18 Bgee:Q6PH18
Uniprot:Q6PH18
Length = 389
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 83/204 (40%), Positives = 116/204 (56%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E ARLLF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 181 IMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQSSMPLH 240
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I+ QE + + + L D +E C KA++LFT +
Sbjct: 241 VAPLLAAAGLHASPMSADRVVAFMDHIRFFQEQVEKLKALQVDSAEYSCAKAIVLFTSDA 300
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D +E LQ+++QC L +YVR +Y QPTRFG+LLL LP+LR V S IE+LFF
Sbjct: 301 CGLSDIPHIEGLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPALRMVSSSVIEQLFFVR 360
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S+ P
Sbjct: 361 LVGKTPIETLIRDMLLSGSSFNWP 384
Score = 203 (76.5 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 45/113 (39%), Positives = 66/113 (58%)
Query: 259 FFKETIGDIPIQRLLGDMYTMEKSY-----ETPGLVDAQPVEMLQDQAQCILGDYVRGRY 313
FF+E + + ++ Y+ K+ + GL D +E LQ+++QC L +YVR +Y
Sbjct: 269 FFQEQVEKLKALQVDSAEYSCAKAIVLFTSDACGLSDIPHIEGLQEKSQCALEEYVRSQY 328
Query: 314 SRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKSY 366
QPTRFG+LLL LP+LR V S IE+LFF +G PI+ L+ DM S+
Sbjct: 329 PNQPTRFGKLLLRLPALRMVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSF 381
>UNIPROTKB|E2R3A8 [details] [associations]
symbol:E2R3A8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 ProteinModelPortal:E2R3A8 Ensembl:ENSCAFT00000024577
Uniprot:E2R3A8
Length = 415
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 81/195 (41%), Positives = 116/195 (59%)
Query: 84 ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW 143
+L+ C++ AR+LF AV W R + F L DQ+ LL +W +LF+L+ AQ S+P
Sbjct: 207 VLILENICEQA-ARVLFGAVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWAQCSMPA 265
Query: 144 D-LSLLINCEKARERLPPDDVRVNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
L L D V V E ++++Q+ + +F+ L D +E C+KA+ILF P+
Sbjct: 266 QVLPFLAATSLHTSPGSSDQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAIILFAPD 325
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
PGL D VE Q+++QC L YVR +YS QP RFG+LLL L SLRAV S +E+LFF
Sbjct: 326 APGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFFV 385
Query: 262 ETIGDIPIQRLLGDM 276
+G PI+ L+ D+
Sbjct: 386 HLVGKTPIKILIRDI 400
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL D VE Q+++QC L YVR +YS QP RFG+LLL L SLRAV S +E+LFF
Sbjct: 325 DAPGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFF 384
Query: 344 KETIGDIPIQRLLGDM 359
+G PI+ L+ D+
Sbjct: 385 VHLVGKTPIKILIRDI 400
>UNIPROTKB|F6Y5T4 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
Ensembl:ENSCAFT00000024577 EMBL:AAEX03026796 OMA:NDQVALL
Uniprot:F6Y5T4
Length = 414
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 81/195 (41%), Positives = 116/195 (59%)
Query: 84 ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW 143
+L+ C++ AR+LF AV W R + F L DQ+ LL +W +LF+L+ AQ S+P
Sbjct: 206 VLILENICEQA-ARVLFGAVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWAQCSMPA 264
Query: 144 D-LSLLINCEKARERLPPDDVRVNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
L L D V V E ++++Q+ + +F+ L D +E C+KA+ILF P+
Sbjct: 265 QVLPFLAATSLHTSPGSSDQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAIILFAPD 324
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
PGL D VE Q+++QC L YVR +YS QP RFG+LLL L SLRAV S +E+LFF
Sbjct: 325 APGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFFV 384
Query: 262 ETIGDIPIQRLLGDM 276
+G PI+ L+ D+
Sbjct: 385 HLVGKTPIKILIRDI 399
Score = 191 (72.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL D VE Q+++QC L YVR +YS QP RFG+LLL L SLRAV S +E+LFF
Sbjct: 324 DAPGLSDTVNVESWQEKSQCALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFF 383
Query: 344 KETIGDIPIQRLLGDM 359
+G PI+ L+ D+
Sbjct: 384 VHLVGKTPIKILIRDI 399
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 82/209 (39%), Positives = 115/209 (55%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
G ++ + E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ
Sbjct: 199 GAAGAVLGIDNVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQA 258
Query: 140 SIPWDLSLLINCE--KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
++P + L+ A V ++++ QE + + +L D +E GC+KA+ L
Sbjct: 259 ALPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIAL 318
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
FTP+ GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +
Sbjct: 319 FTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQ 378
Query: 258 LFFKETIGDIPIQRLLGDMYTMEKSYETP 286
LFF +G PI+ L+ DM ++ P
Sbjct: 379 LFFMRLVGKTPIETLIRDMLLSGSTFNWP 407
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 325 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 384
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 385 VGKTPIETLIRDM 397
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 82/209 (39%), Positives = 115/209 (55%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
G ++ + E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ
Sbjct: 203 GAAGAVLGIDNVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQA 262
Query: 140 SIPWDLSLLINCE--KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
++P + L+ A V ++++ QE + + +L D +E GC+KA+ L
Sbjct: 263 ALPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIAL 322
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
FTP+ GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +
Sbjct: 323 FTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQ 382
Query: 258 LFFKETIGDIPIQRLLGDMYTMEKSYETP 286
LFF +G PI+ L+ DM ++ P
Sbjct: 383 LFFMRLVGKTPIETLIRDMLLSGSTFNWP 411
Score = 189 (71.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 329 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 388
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 389 VGKTPIETLIRDM 401
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 82/209 (39%), Positives = 115/209 (55%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
G ++ + E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ
Sbjct: 191 GAAGAVLGIDNVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQA 250
Query: 140 SIPWDLSLLINCE--KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
++P + L+ A V ++++ QE + + +L D +E GC+KA+ L
Sbjct: 251 ALPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIAL 310
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
FTP+ GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +
Sbjct: 311 FTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQ 370
Query: 258 LFFKETIGDIPIQRLLGDMYTMEKSYETP 286
LFF +G PI+ L+ DM ++ P
Sbjct: 371 LFFMRLVGKTPIETLIRDMLLSGSTFNWP 399
Score = 189 (71.6 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 317 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 376
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 377 VGKTPIETLIRDM 389
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 82/209 (39%), Positives = 115/209 (55%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
G ++ + E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ
Sbjct: 201 GAAGAVLGIDNVCELAARLLFSTVEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQA 260
Query: 140 SIPWDLSLLINCE--KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
++P + L+ A V ++++ QE + + +L D +E GC+KA+ L
Sbjct: 261 ALPLHTAPLLAAAGLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIAL 320
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
FTP+ GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +
Sbjct: 321 FTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQ 380
Query: 258 LFFKETIGDIPIQRLLGDMYTMEKSYETP 286
LFF +G PI+ L+ DM ++ P
Sbjct: 381 LFFMRLVGKTPIETLIRDMLLSGSTFNWP 409
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 327 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 386
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 387 VGKTPIETLIRDM 399
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 81/196 (41%), Positives = 111/196 (56%)
Query: 93 ETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCE 152
E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ ++P + L+
Sbjct: 191 ELAARLLFSTVEWARHAPFFPELPAADQVALLRLSWSELFVLNAAQAALPLHTAPLLAAA 250
Query: 153 --KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
A V ++++ QE + + +L D +E GC+KA+ LFTP+ GL D
Sbjct: 251 GLHAAPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAH 310
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQ 270
VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF +G PI+
Sbjct: 311 VESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIE 370
Query: 271 RLLGDMYTMEKSYETP 286
L+ DM ++ P
Sbjct: 371 TLIRDMLLSGSTFNWP 386
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 304 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 363
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 364 VGKTPIETLIRDM 376
>UNIPROTKB|F1NNE1 [details] [associations]
symbol:F1NNE1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GO:GO:0004879 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 IPI:IPI00600540
EMBL:AADN02002100 EMBL:AADN02002101 Ensembl:ENSGALT00000024701
Uniprot:F1NNE1
Length = 175
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 75/168 (44%), Positives = 109/168 (64%)
Query: 120 QLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVN---NEIKLIQEIL 176
QL+LL+++W+ELF+L +AQW+IP D + L+ D ++N +EI+ +QE++
Sbjct: 4 QLMLLEDAWRELFVLGIAQWAIPVDANTLL-AVSGMNGDNTDSQKLNKIISEIQALQEVV 62
Query: 177 ARFRQLSPDGSECGCMKAVILF--TPETPG-----LVDAQPVEMLQDQAQCILGDYVRGR 229
ARFRQL D +E C+K ++ F P G +A + LQD+AQ L Y+ R
Sbjct: 63 ARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTR 122
Query: 230 YSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
Y QP RFG+LLL+LP+LR++ STIE +FFK+TIG++PI RLL DMY
Sbjct: 123 YPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY 170
Score = 214 (80.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 40/71 (56%), Positives = 53/71 (74%)
Query: 290 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 349
+A + LQD+AQ L Y+ RY QP RFG+LLL+LP+LR++ STIE +FFK+TIG+
Sbjct: 100 NAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGN 159
Query: 350 IPIQRLLGDMY 360
+PI RLL DMY
Sbjct: 160 VPITRLLSDMY 170
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 81/196 (41%), Positives = 110/196 (56%)
Query: 93 ETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCE 152
E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ +P + L+
Sbjct: 191 ELAARLLFSTVEWARHAPFFPELPAADQVGLLRLSWSELFVLNAAQAPVPLHTAPLLAAA 250
Query: 153 --KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
A V ++++ QE + + +L D +E GC+KA+ LFTP+ GL D
Sbjct: 251 GLHAGPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAH 310
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQ 270
VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF +G PI+
Sbjct: 311 VESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIE 370
Query: 271 RLLGDMYTMEKSYETP 286
L+ DM ++ P
Sbjct: 371 TLIRDMLLSGSTFNWP 386
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 304 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 363
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 364 VGKTPIETLIRDM 376
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 81/196 (41%), Positives = 110/196 (56%)
Query: 93 ETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCE 152
E ARLLF V W R F L DQ+ LL+ SW ELF+L+ AQ +P + L+
Sbjct: 191 ELAARLLFSTVEWARHAPFFPELPAADQVGLLRLSWSELFVLNAAQAPVPLHTAPLLAAA 250
Query: 153 --KARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
A V ++++ QE + + +L D +E GC+KA+ LFTP+ GL D
Sbjct: 251 GLHAGPMAAERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAH 310
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQ 270
VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF +G PI+
Sbjct: 311 VESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIE 370
Query: 271 RLLGDMYTMEKSYETP 286
L+ DM ++ P
Sbjct: 371 TLIRDMLLSGSTFNWP 386
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 40/73 (54%), Positives = 49/73 (67%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +YVR +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 304 GLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRL 363
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 364 VGKTPIETLIRDM 376
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 76/178 (42%), Positives = 106/178 (59%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M E E AR+LF AV W R + F L DQ+ LL+ +W ELF+L+ AQ S+P
Sbjct: 206 IMGIENICELAARMLFSAVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLH 265
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT +
Sbjct: 266 VAPLLAAAGLHASPMSADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDA 325
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 326 CGLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFF 383
Score = 176 (67.0 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 35/57 (61%), Positives = 42/57 (73%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
GL D VE LQ+++QC L +YVR +Y QPTRFG+LLL LPSLR V S IE+LFF
Sbjct: 327 GLSDVAHVESLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFF 383
>ZFIN|ZDB-GENE-030131-4362 [details] [associations]
symbol:nr2f6a "nuclear receptor subfamily 2, group
F, member 6a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030131-4362 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08549 OMA:DPNGGTN HSSP:P20393 EMBL:CR384062
EMBL:BC065330 IPI:IPI00494205 RefSeq:NP_991120.1 UniGene:Dr.77527
SMR:Q6P117 Ensembl:ENSDART00000022379 GeneID:325637 KEGG:dre:325637
CTD:325637 InParanoid:Q6P117 NextBio:20809398 Uniprot:Q6P117
Length = 402
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 78/204 (38%), Positives = 114/204 (55%)
Query: 86 MSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL 145
M + E ARLLF + W R + F L +Q+ LL+ SW ELF+L+ AQ ++P +
Sbjct: 195 MGIDSICELAARLLFSIIEWARNIPYFPELPVSEQVALLRLSWSELFILNAAQSALPLHM 254
Query: 146 SLLINCEKARERLPPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
+ L+ P RV +++++ Q+ + + +L D +E C+KA+ LF+P+
Sbjct: 255 APLLAAAGFHSS-PMSAERVVSFMDQVRVFQDQVEKLTRLQVDSAEYSCLKAIALFSPDA 313
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ++AQ L +Y R +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 314 CGLTDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAVPASLISQLFFMR 373
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S P
Sbjct: 374 LVGKTPIETLIRDMQLSGSSISWP 397
Score = 181 (68.8 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +Y R +Y QP RFGRLLL LP+LRAV S I +LFF
Sbjct: 315 GLTDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAVPASLISQLFFMRL 374
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 375 VGKTPIETLIRDM 387
>ZFIN|ZDB-GENE-040426-2351 [details] [associations]
symbol:nr2f6b "nuclear receptor subfamily 2, group
F, member 6b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040426-2351 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 eggNOG:NOG277317 OrthoDB:EOG4FN4HT HSSP:P20393
EMBL:BX248501 EMBL:CT573239 EMBL:BC065332 IPI:IPI00503290
RefSeq:NP_998404.1 UniGene:Dr.16181 SMR:Q6P115
Ensembl:ENSDART00000027666 Ensembl:ENSDART00000123931 GeneID:406522
KEGG:dre:406522 CTD:406522 InParanoid:Q6P115 OMA:VMGIDSI
NextBio:20818095 Uniprot:Q6P115
Length = 404
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 77/204 (37%), Positives = 113/204 (55%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M + E ARLLF + W R + F L +Q+ LL+ SW ELF+L+ AQ ++P
Sbjct: 196 MMGIDNICELAARLLFSTIEWARNIPYFPDLPVSEQVALLRLSWSELFILNAAQSALPLH 255
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
+ L+ P D V +++++ Q+ + + +L D E C+KA+ LF+P+
Sbjct: 256 TAPLLAAAGFHSSPMPADRVVSFMDQVRVFQDQVDKLTRLQVDSVEYSCLKAIALFSPDA 315
Query: 203 PGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKE 262
GL D VE LQ++AQ L +Y R +Y QP RFGRLLL LP+LRAV + I +LFF
Sbjct: 316 CGLSDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAVPANLISQLFFMR 375
Query: 263 TIGDIPIQRLLGDMYTMEKSYETP 286
+G PI+ L+ DM S P
Sbjct: 376 LVGKTPIETLIRDMQLSGSSISWP 399
Score = 176 (67.0 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 38/73 (52%), Positives = 48/73 (65%)
Query: 287 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 346
GL D VE LQ++AQ L +Y R +Y QP RFGRLLL LP+LRAV + I +LFF
Sbjct: 317 GLSDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRLLLRLPALRAVPANLISQLFFMRL 376
Query: 347 IGDIPIQRLLGDM 359
+G PI+ L+ DM
Sbjct: 377 VGKTPIETLIRDM 389
>FB|FBgn0003720 [details] [associations]
symbol:tll "tailless" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI;TAS] [GO:0007362
"terminal region determination" evidence=IGI;NAS;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0045165 "cell fate
commitment" evidence=IMP] [GO:0001748 "optic lobe placode
development" evidence=IMP] [GO:0009948 "anterior/posterior axis
specification" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] [GO:0007369 "gastrulation"
evidence=NAS] [GO:0001708 "cell fate specification" evidence=TAS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0003677
"DNA binding" evidence=IDA;NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=TAS] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0035271 "ring gland development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0055057
"neuroblast division" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0003677 GO:GO:0008293 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003705
GO:GO:0051726 GO:GO:0007369 GO:GO:0001746 GO:GO:0001748
GO:GO:0007362 GO:GO:0035271 GeneTree:ENSGT00700000104390
eggNOG:NOG277339 KO:K08545 OMA:ILLEDAW GO:GO:0055057 EMBL:M34639
EMBL:AF019362 EMBL:BT022195 PIR:A35602 RefSeq:NP_524596.1
UniGene:Dm.1906 ProteinModelPortal:P18102 SMR:P18102 DIP:DIP-19302N
IntAct:P18102 MINT:MINT-300240 STRING:P18102 PRIDE:P18102
EnsemblMetazoa:FBtr0085709 GeneID:43656 KEGG:dme:Dmel_CG1378
UCSC:CG1378-RA CTD:43656 FlyBase:FBgn0003720 InParanoid:P18102
OrthoDB:EOG4PRR6T PhylomeDB:P18102 GenomeRNAi:43656 NextBio:835100
Bgee:P18102 GermOnline:CG1378 Uniprot:P18102
Length = 452
Score = 216 (81.1 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 57/182 (31%), Positives = 85/182 (46%)
Query: 25 HNPHHSPDLLPPNGISSV---KIPPTVLYPPSGLKXXXXXXXXXXXMFLATHQPPPHPGL 81
H+P H PP ++V +P +P LAT PP P L
Sbjct: 167 HHPAHMAAFQPPPSAAAVLDLSVPRVPHHPVHQGHHGFFSPTAAYMNALATRALPPTPPL 226
Query: 82 LQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI 141
M+AE +ET A LF V W++ + F L DQLLLL+ESWKE F+L +AQ+ +
Sbjct: 227 ----MAAEHIKETAAEHLFKNVNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLM 282
Query: 142 PWDLSLLINCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
P + + L+ ++ V E+ QE+L + L+ D +E C++A+ LF
Sbjct: 283 PMNFAQLLFVYESENANREIMGMVTREVHAFQEVLNQLCHLNIDSTEYECLRAISLFRKS 342
Query: 202 TP 203
P
Sbjct: 343 PP 344
Score = 154 (59.3 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 33/83 (39%), Positives = 51/83 (61%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S E+ GL+++ V + + A+ L +Y++ + QP RF LL ++ + V TIE L
Sbjct: 369 SAESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEEL 428
Query: 342 FFKETIGDIPIQRLLGDMYTMEK 364
FF++TIGDI I RL+ DMY+ K
Sbjct: 429 FFRKTIGDITIVRLISDMYSQRK 451
Score = 152 (58.6 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
E+ GL+++ V + + A+ L +Y++ + QP RF LL ++ + V TIE LFF
Sbjct: 371 ESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELFF 430
Query: 261 KETIGDIPIQRLLGDMYTMEK 281
++TIGDI I RL+ DMY+ K
Sbjct: 431 RKTIGDITIVRLISDMYSQRK 451
Score = 58 (25.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 22/79 (27%), Positives = 31/79 (39%)
Query: 1 VQHERGPRKPKI--HNAHHQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYPPSGLKXX 58
VQHERGPR + H A ++D+ + P + N + P + P GL
Sbjct: 106 VQHERGPRNSTLRRHMAMYKDAMMGAGEMPQIPAEILMNTAALTGFPGVPM-PMPGLPQR 164
Query: 59 XXXXXXXXXMFLATHQPPP 77
+A QPPP
Sbjct: 165 AGHHPAH----MAAFQPPP 179
>UNIPROTKB|P51129 [details] [associations]
symbol:rxrg "Retinoic acid receptor RXR-gamma" species:8355
"Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11443
PIR:D41977 ProteinModelPortal:P51129 SMR:P51129 Uniprot:P51129
Length = 470
Score = 276 (102.2 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 58/179 (32%), Positives = 97/179 (54%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L DQ++LL+ W EL + + S+ +L+ R
Sbjct: 284 LFTLVEWAKRIPYFSDLPLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 343
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ V + +++ E++++ + + D SE GC++A++LF P+ GL +A VE L+++
Sbjct: 344 SAHNAGVGSIFDRVLTELVSKMKDMDMDKSELGCLRAIVLFNPDAKGLSNAAEVEALREK 403
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 404 VYATLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 462
Score = 148 (57.2 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL +A VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 387 DAKGLSNAAEVEALREKVYATLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF 446
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 447 FKLIGDTPIDTFLMEM 462
Score = 42 (19.8 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 25 HNPHHSPDLLPPNGISSVKIP 45
+N S D+ PP G+SS+ P
Sbjct: 108 NNVSCSEDIKPPPGLSSLGSP 128
>UNIPROTKB|B3KY83 [details] [associations]
symbol:RXRA "cDNA FLJ16020 fis, clone BRAMY2003287, highly
similar to RETINOIC ACID RECEPTOR RXR-ALPHA" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060687 "regulation
of branching involved in prostate gland morphogenesis"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006954
GO:GO:0045944 GO:GO:0051384 GO:GO:0007565 GO:GO:0001889
GO:GO:0007494 GO:GO:0044212 GO:GO:0043065 GO:GO:0032526
GO:GO:0003690 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038
GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:AC156789 EMBL:AL354796 EMBL:AL669970 EMBL:AL683798
UniGene:Hs.590886 HGNC:HGNC:10477 EMBL:AK131192 IPI:IPI01011260
SMR:B3KY83 STRING:B3KY83 Ensembl:ENST00000540193 Uniprot:B3KY83
Length = 365
Score = 267 (99.0 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 172 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 230
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 231 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 290
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 291 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 350
Query: 270 QRLLGDM 276
L +M
Sbjct: 351 DTFLMEM 357
Score = 142 (55.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 282 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 341
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 342 FKLIGDTPIDTFLMEM 357
Score = 41 (19.5 bits), Expect = 6.4e-26, Sum P(2) = 6.4e-26
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 26 NP-HHSPDLLPPNGISSV-KIP 45
NP S D+ PP G++ V K+P
Sbjct: 2 NPVSSSEDIKPPLGLNGVLKVP 23
>RGD|3610 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001890 "placenta development" evidence=IEP;ISO]
[GO:0001893 "maternal placenta development" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEP]
[GO:0007494 "midgut development" evidence=IEP] [GO:0007507 "heart
development" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation" evidence=IMP]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0019048
"virus-host interaction" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031641 "regulation of myelination"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IEP;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEP] [GO:0033189
"response to vitamin A" evidence=IEP] [GO:0033280 "response to
vitamin D" evidence=IEP] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA;ISO] [GO:0042809
"vitamin D receptor binding" evidence=IEA;ISO] [GO:0042974 "retinoic
acid receptor binding" evidence=IPI] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044323 "retinoic acid-responsive
element binding" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP;IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA;ISO] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA;ISO] [GO:0070644 "vitamin D response element binding"
evidence=IEA;ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0005634 GO:GO:0019048
GO:GO:0008285 GO:GO:0006355 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122 GO:GO:0043065
GO:GO:0000790 GO:GO:0032526 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
GO:GO:0070644 EMBL:L06482 IPI:IPI00188860 PIR:A47278 PIR:I67427
UniGene:Rn.108206 ProteinModelPortal:Q05343 SMR:Q05343 STRING:Q05343
PhosphoSite:Q05343 UCSC:RGD:3610 InParanoid:Q05343 BindingDB:Q05343
ChEMBL:CHEMBL4431 ArrayExpress:Q05343 Genevestigator:Q05343
GermOnline:ENSRNOG00000009446 Uniprot:Q05343
Length = 467
Score = 270 (100.1 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 62/196 (31%), Positives = 103/196 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 274 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 332
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 333 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 392
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 393 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 452
Query: 270 QRLLGDMYTMEKSYET 285
L +M +E ++T
Sbjct: 453 DTFLMEM--LEAPHQT 466
Score = 142 (55.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 384 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 443
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 444 FKLIGDTPIDTFLMEM 459
Score = 46 (21.3 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 102 PMNPVSSSEDIKPPLGLNGVLKVP 125
>UNIPROTKB|Q0VJ96 [details] [associations]
symbol:Rxra "Retinoic acid receptor RXR-alpha"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 HOVERGEN:HBG005606 EMBL:CH474001 GO:GO:0060528
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0055012
GO:GO:0044323 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 GO:GO:0070644 UniGene:Rn.108206 EMBL:AM295012
EMBL:AM295013 EMBL:AM392401 IPI:IPI00851118 RefSeq:NP_036937.2
SMR:Q0VJ96 STRING:Q0VJ96 Ensembl:ENSRNOT00000012892 GeneID:25271
KEGG:rno:25271 InParanoid:Q0VJ96 NextBio:605957
Genevestigator:Q0VJ96 Uniprot:Q0VJ96
Length = 467
Score = 270 (100.1 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 62/196 (31%), Positives = 103/196 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 274 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 332
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 333 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 392
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 393 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 452
Query: 270 QRLLGDMYTMEKSYET 285
L +M +E ++T
Sbjct: 453 DTFLMEM--LEAPHQT 466
Score = 142 (55.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 384 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 443
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 444 FKLIGDTPIDTFLMEM 459
Score = 46 (21.3 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 102 PMNPVSSSEDIKPPLGLNGVLKVP 125
>UNIPROTKB|F1P6M9 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 InterPro:IPR021780
Pfam:PF11825 OMA:KHFLPLD EMBL:AAEX03006790
Ensembl:ENSCAFT00000031555 Uniprot:F1P6M9
Length = 486
Score = 270 (100.1 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 61/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 293 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 351
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D SE GC++A++LF P++ GL +
Sbjct: 352 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKSELGCLRAIVLFNPDSKGLSNPA 411
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 412 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 471
Query: 270 QRLLGDM 276
L +M
Sbjct: 472 DTFLMEM 478
Score = 142 (55.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 403 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 462
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 463 FKLIGDTPIDTFLMEM 478
Score = 46 (21.3 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 121 PMNPVSSSEDIKPPLGLNGVLKVP 144
>ZFIN|ZDB-GENE-990415-243 [details] [associations]
symbol:rxrab "retinoid x receptor, alpha b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 EMBL:U29894 IPI:IPI00481196 PIR:I50514
RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415
SMR:Q90415 STRING:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011
HOGENOM:HOG000260821 InParanoid:Q90415 OrthoDB:EOG4SJ5DV
NextBio:20931280 ArrayExpress:Q90415 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415
Length = 379
Score = 265 (98.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 186 CQAADKQL-FTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 244
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 245 TGLHVHRNSAHTAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPS 304
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 305 EVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 364
Query: 270 QRLLGDM 276
L +M
Sbjct: 365 DTFLMEM 371
Score = 141 (54.7 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 296 DSKGLSNPSEVEALRERVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF 355
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 356 FKLIGDTPIDTFLMEM 371
Score = 39 (18.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 30 SPDLLPPNGISSV-KIP 45
S D+ PP G++ V K+P
Sbjct: 22 SEDIKPPLGLNGVMKVP 38
Score = 38 (18.4 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERL---FFKETIGDIP 268
+D C++ R R Q R+ + L M AV RQ ER F D+P
Sbjct: 91 RDNKDCMIDKRQRNRC--QYCRYQKCLAMGMKREAVQEERQRAKERSEAEFGGCANEDMP 148
Query: 269 IQRLLGDMYTMEKSYET 285
++++L +E ET
Sbjct: 149 VEKILEAELAVEPKTET 165
>UNIPROTKB|P19793 [details] [associations]
symbol:RXRA "Retinoic acid receptor RXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044323 "retinoic acid-responsive element
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0019048 "virus-host interaction"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006766 "vitamin metabolic process" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0003708 "retinoic acid receptor activity"
evidence=TAS] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0070644 "vitamin D response element binding"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471090 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0008203 GO:GO:0001889 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 GO:GO:0000790 GO:GO:0003713 GO:GO:0032526
GO:GO:0003690 GO:GO:0046982 GO:GO:0001890
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0033189
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0010269 GO:GO:0031490 GO:GO:0033280 GO:GO:0031103
GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606
GO:GO:0006766 PDB:1R0N PDBsum:1R0N GO:GO:0060528 GO:GO:0035357
GO:GO:0055012 GO:GO:0044323 PDB:1FM6 PDB:1FM9 PDB:1K74 PDB:1RDT
PDB:1XV9 PDB:1XVP PDB:3H0A PDBsum:1FM6 PDBsum:1FM9 PDBsum:1K74
PDBsum:1RDT PDBsum:1XV9 PDBsum:1XVP PDBsum:3H0A PDB:1MV9 PDB:1MVC
PDB:1MZN PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0 PDB:3DZU
PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3KWY PDB:3OAP PDB:3OZJ
PDB:3PCU PDB:3R5M PDBsum:1MV9 PDBsum:1MVC PDBsum:1MZN PDBsum:2P1T
PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0 PDBsum:3DZU
PDBsum:3DZY PDBsum:3E00 PDBsum:3E94 PDBsum:3FUG PDBsum:3KWY
PDBsum:3OAP PDBsum:3OZJ PDBsum:3PCU PDBsum:3R5M PDB:1XLS
PDBsum:1XLS PDB:3R29 PDB:3R2A PDBsum:3R29 PDBsum:3R2A PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
DrugBank:DB00523 DrugBank:DB00926 PDB:1DSZ PDBsum:1DSZ
DrugBank:DB00210 OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:X52773 EMBL:AB307705 EMBL:AC156789 EMBL:AL354796
EMBL:AL669970 EMBL:AL683798 EMBL:BC110998 EMBL:DQ303444
IPI:IPI00418394 PIR:S09592 RefSeq:NP_002948.1 UniGene:Hs.590886
PDB:1BY4 PDB:1FBY PDB:1G1U PDB:1G5Y PDB:1LBD PDB:1RXR PDB:1YNW
PDB:2NLL PDB:3NSP PDB:3NSQ PDB:3UVV PDBsum:1BY4 PDBsum:1FBY
PDBsum:1G1U PDBsum:1G5Y PDBsum:1LBD PDBsum:1RXR PDBsum:1YNW
PDBsum:2NLL PDBsum:3NSP PDBsum:3NSQ PDBsum:3UVV DisProt:DP00062
ProteinModelPortal:P19793 SMR:P19793 DIP:DIP-641N IntAct:P19793
MINT:MINT-98407 STRING:P19793 PhosphoSite:P19793 DMDM:133701
PaxDb:P19793 PRIDE:P19793 DNASU:6256 Ensembl:ENST00000481739
GeneID:6256 KEGG:hsa:6256 UCSC:uc004cfb.2 CTD:6256
GeneCards:GC09P137208 HGNC:HGNC:10477 HPA:CAB004565 HPA:CAB005352
MIM:180245 neXtProt:NX_P19793 PharmGKB:PA34890 InParanoid:P19793
KO:K08524 OMA:KHFLPLD BindingDB:P19793 ChEMBL:CHEMBL2061
EvolutionaryTrace:P19793 GenomeRNAi:6256 NextBio:24295
PMAP-CutDB:P19793 ArrayExpress:P19793 Bgee:P19793 CleanEx:HS_RXRA
Genevestigator:P19793 GermOnline:ENSG00000186350 Uniprot:P19793
Length = 462
Score = 267 (99.0 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 269 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 327
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 328 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 387
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 388 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 447
Query: 270 QRLLGDM 276
L +M
Sbjct: 448 DTFLMEM 454
Score = 142 (55.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 379 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 438
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 439 FKLIGDTPIDTFLMEM 454
Score = 46 (21.3 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 97 PMNPVSSSEDIKPPLGLNGVLKVP 120
>UNIPROTKB|F1MX52 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060528 "secretory
columnal luminar epithelial cell differentiation involved in
prostate glandular acinus development" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044323
"retinoic acid-responsive element binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0060528 GeneTree:ENSGT00690000101777
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644
EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423
IPI:IPI00722888 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52
Length = 474
Score = 267 (99.0 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 281 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 339
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 340 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 399
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 400 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 459
Query: 270 QRLLGDM 276
L +M
Sbjct: 460 DTFLMEM 466
Score = 142 (55.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 391 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 450
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 451 FKLIGDTPIDTFLMEM 466
Score = 46 (21.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 109 PMNPVSSSEDIKPPLGLNGVLKVP 132
>UNIPROTKB|F1NH64 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0004886 "9-cis retinoic acid
receptor activity" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response
element binding" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060687
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0044323
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD
GO:GO:0070644 EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026435
IPI:IPI00584474 Ensembl:ENSGALT00000004139 Uniprot:F1NH64
Length = 448
Score = 265 (98.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 255 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 313
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 314 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 373
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 374 EVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 433
Query: 270 QRLLGDM 276
L +M
Sbjct: 434 DTFLMEM 440
Score = 140 (54.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 365 DSKGLSNPAEVEALREKVYASLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF 424
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 425 FKLIGDTPIDTFLMEM 440
Score = 46 (21.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 24 PHNP-HHSPDLLPPNGISSV-KIP 45
P NP S D+ PP G++ V K+P
Sbjct: 83 PMNPVSSSEDIKPPLGLNGVLKVP 106
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 266 (98.7 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 302 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 360
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 361 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPG 420
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 421 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 480
Query: 270 QRLLGDM 276
L +M
Sbjct: 481 DTFLMEM 487
Score = 141 (54.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 412 DSKGLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 471
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 472 FKLIGDTPIDTFLMEM 487
Score = 39 (18.8 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 30 SPDLLPPNGISSV-KIP 45
S D+ PP G++ V K+P
Sbjct: 137 SEDIKPPLGLNGVMKVP 153
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFK-ETIG----D 266
+D C++ R R Q R+ + L M AV RQ ER + E+ D
Sbjct: 205 RDNKDCVIDKRQRNRC--QYCRYQKCLAMGMKREAVQEERQRAKERSENEVESTSSANED 262
Query: 267 IPIQRLLGDMYTMEKSYET 285
+P++++L +E ET
Sbjct: 263 MPVEKILEAELAVEPKTET 281
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 263 (97.6 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 340 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 398
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 399 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 458
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 459 EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 518
Query: 270 QRLLGDM 276
L +M
Sbjct: 519 DTFLMEM 525
Score = 137 (53.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 450 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 509
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 510 FKLIGDTPIDTFLMEM 525
Score = 42 (19.8 bits), Expect = 3.5e-24, Sum P(2) = 3.5e-24
Identities = 11/31 (35%), Positives = 12/31 (38%)
Query: 24 PHNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
P P P P G S PP + PP G
Sbjct: 100 PPGPPLPPSTAPSLGGSGAPPPPPMPPPPLG 130
Score = 37 (18.1 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN + PP+ PP
Sbjct: 82 SPDSSSPNPLPQGVPPPSPPGPP 104
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 263 (97.6 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 339 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 397
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 398 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 457
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 458 EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 517
Query: 270 QRLLGDM 276
L +M
Sbjct: 518 DTFLMEM 524
Score = 137 (53.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 449 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 508
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 509 FKLIGDTPIDTFLMEM 524
Score = 40 (19.1 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN + PP+ PP
Sbjct: 81 SPDSSSPNPLPQGAAPPSPPGPP 103
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 263 (97.6 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 339 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 397
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 398 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 457
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 458 EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 517
Query: 270 QRLLGDM 276
L +M
Sbjct: 518 DTFLMEM 524
Score = 137 (53.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 449 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 508
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 509 FKLIGDTPIDTFLMEM 524
Score = 40 (19.1 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN + PP+ PP
Sbjct: 81 SPDSSSPNPLPQGAAPPSPPGPP 103
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 282 (104.3 bits), Expect = 6.3e-24, P = 6.3e-24
Identities = 71/214 (33%), Positives = 113/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 378 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQECNTSLVRACWNELFTL 433
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE ++ DG
Sbjct: 434 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKIDIDG 493
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + +E Q++AQ L DYV+ Y R R+L+ LP+
Sbjct: 494 YEYAYLKAIVLFSPDHPGLNSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPA 553
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + S E LFF IG++PI ++ + ME
Sbjct: 554 LRLMSSSITEELFFTGLIGNVPIDSIIPYILKME 587
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/82 (37%), Positives = 46/82 (56%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E Q++AQ L DYV+ Y R R+L+ LP+LR + S E L
Sbjct: 506 SPDHPGLNSSTQIEKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEEL 565
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++PI ++ + ME
Sbjct: 566 FFTGLIGNVPIDSIIPYILKME 587
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 282 (104.3 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 72/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 389 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 444
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 445 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMARLDIDG 504
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 505 YEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 564
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + S E LFF IG++ I ++ + ME
Sbjct: 565 LRLMSSSITEELFFTGLIGNVSIDSIIPYILKME 598
Score = 141 (54.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + S E L
Sbjct: 517 SPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSSITEEL 576
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 577 FFTGLIGNVSIDSIIPYILKME 598
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 263 (97.6 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 340 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 398
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 399 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 458
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 459 EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 518
Query: 270 QRLLGDM 276
L +M
Sbjct: 519 DTFLMEM 525
Score = 137 (53.3 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 450 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 509
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 510 FKLIGDTPIDTFLMEM 525
Score = 39 (18.8 bits), Expect = 7.3e-24, Sum P(2) = 7.3e-24
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 30 SPDLLPPNGISSVKIPPT---VLYPPS 53
SPD PN +S PP+ + PPS
Sbjct: 82 SPDSSSPNPLSQGAPPPSPPGLPLPPS 108
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 280 (103.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 73/216 (33%), Positives = 112/216 (51%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ+L + + + L++ W ELF L
Sbjct: 414 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPSFQSLGQENSISLVKACWNELFSL 469
Query: 135 HLAQ----WSIPWDLSLLINC---EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ ++ L+ +N ++L D V+ V + I +QE +LS DG
Sbjct: 470 GLAQCCQVMNVETILAAFVNHLHNSMQHDKLSADKVKLVMDHIFKLQEFCNSMVKLSVDG 529
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA+ LF+P+ PGL + +E LQ++A DYV Y R RLLL LP+
Sbjct: 530 YEYAYLKAIALFSPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPA 589
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS 282
LR + + E LFF IG++ I ++ + ME S
Sbjct: 590 LRLLNAAITEELFFAGLIGNVQIDSIIPYILRMETS 625
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E LQ++A DYV Y R RLLL LP+LR + + E L
Sbjct: 542 SPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLLNAAITEEL 601
Query: 342 FFKETIGDIPIQRLLGDMYTMEKS 365
FF IG++ I ++ + ME S
Sbjct: 602 FFAGLIGNVQIDSIIPYILRMETS 625
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 279 (103.3 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 374 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 429
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 430 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 489
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 490 YEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 549
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 550 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 583
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 502 SPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 562 FFTGLIGNVSIDSIIPYILKME 583
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 279 (103.3 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 374 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 429
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 430 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 489
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 490 YEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 549
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 550 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 583
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 502 SPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 562 FFTGLIGNVSIDSIIPYILKME 583
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 279 (103.3 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 374 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 429
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 430 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 489
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 490 HEYAYLKAIVLFSPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 549
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 550 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 583
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 502 SPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 562 FFTGLIGNVSIDSIIPYILKME 583
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 279 (103.3 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 407 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 462
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 463 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 522
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 523 YEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 582
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 583 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 616
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 535 SPDHPGLTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 594
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 595 FFTGLIGNVSIDSIIPYILKME 616
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 279 (103.3 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 73/216 (33%), Positives = 111/216 (51%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ+L + + + L++ W ELF L
Sbjct: 415 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPSFQSLGQENSISLVKACWNELFSL 470
Query: 135 HLAQWS----IPWDLSLLINC---EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S + L+ +N ++L D V+ V + I +QE +L DG
Sbjct: 471 GLAQCSQVMNVETILAAFVNHLQNSMQHDKLSSDKVKLVTDHIFKLQEFCNSMVKLCVDG 530
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA+ LF+P+ PGL + +E LQ++A DYV Y R RLLL LP+
Sbjct: 531 YEYAYLKAIALFSPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPA 590
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS 282
LR + + E LFF IG++ I ++ + ME S
Sbjct: 591 LRLMNAAITEELFFAGLIGNVQIDSIIPYILRMETS 626
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E LQ++A DYV Y R RLLL LP+LR + + E L
Sbjct: 543 SPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLMNAAITEEL 602
Query: 342 FFKETIGDIPIQRLLGDMYTMEKS 365
FF IG++ I ++ + ME S
Sbjct: 603 FFAGLIGNVQIDSIIPYILRMETS 626
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 261 (96.9 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 265 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 323
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 324 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPG 383
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 384 EVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 443
Query: 270 QRLLGDM 276
L +M
Sbjct: 444 DTFLMEM 450
Score = 135 (52.6 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 375 DAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 434
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 435 FKLIGDTPIDTFLMEM 450
Score = 39 (18.8 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 24 PHNPHHSPDLLPPNGISS 41
PH P P +PP + S
Sbjct: 39 PHTPSAPPPPMPPPPLGS 56
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN +S IPP+ PP
Sbjct: 17 SPDSSSPNPLSQ-GIPPSS--PP 36
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 278 (102.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 374 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 429
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 430 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 489
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 490 YEYAYLKAIVLFSPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 549
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 550 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 583
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 502 SPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 562 FFTGLIGNVSIDSIIPYILKME 583
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 278 (102.9 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 71/214 (33%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + L++ W ELF L
Sbjct: 374 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTL 429
Query: 135 HLAQ----WSIPWDLSLLIN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S+ L+ ++N + + ++L D ++ V I +QE +L DG
Sbjct: 430 GLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDG 489
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL +E Q++AQ L DYV+ YS R R+L+ LP+
Sbjct: 490 YEYAYLKAIVLFSPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPA 549
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFF IG++ I ++ + ME
Sbjct: 550 LRLMSSNITEELFFTGLIGNVSIDSIIPYILKME 583
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 30/82 (36%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ YS R R+L+ LP+LR + + E L
Sbjct: 502 SPDHPGLTGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEEL 561
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 562 FFTGLIGNVSIDSIIPYILKME 583
>UNIPROTKB|P48443 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
EMBL:CH471067 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0032526
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0007519 HOVERGEN:HBG005606 EMBL:AL160058 DrugBank:DB00523
DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:U38480 EMBL:CR456705
EMBL:BC012063 IPI:IPI00009736 RefSeq:NP_001243500.1
RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8
ProteinModelPortal:P48443 SMR:P48443 DIP:DIP-56220N IntAct:P48443
MINT:MINT-1378806 STRING:P48443 PhosphoSite:P48443 DMDM:1350913
PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842
GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370
HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443
PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443
BindingDB:P48443 ChEMBL:CHEMBL2004 EvolutionaryTrace:P48443
GenomeRNAi:6258 NextBio:24303 ArrayExpress:P48443 Bgee:P48443
CleanEx:HS_RXRG Genevestigator:P48443 GermOnline:ENSG00000143171
Uniprot:P48443
Length = 463
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
Score = 144 (55.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDTFLMEM 455
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKE---TIG--D 266
+D C++ R R Q R+ + L+M AV RQ + ER + T G D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEAECATSGHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>UNIPROTKB|Q0VC20 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K EMBL:BC120391
IPI:IPI00712482 RefSeq:NP_001068876.1 UniGene:Bt.11333
ProteinModelPortal:Q0VC20 SMR:Q0VC20 STRING:Q0VC20 PRIDE:Q0VC20
Ensembl:ENSBTAT00000022350 GeneID:509500 KEGG:bta:509500 CTD:6258
InParanoid:Q0VC20 KO:K08526 OMA:FMKFPTG NextBio:20868991
Uniprot:Q0VC20
Length = 463
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
Score = 144 (55.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDTFLMEM 455
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKETIG-----D 266
+D C++ R R Q R+ + L+M AV RQ + ER + D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEAECANSGHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>UNIPROTKB|E2RD69 [details] [associations]
symbol:RXRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:AAEX03018391
RefSeq:XP_536146.2 ProteinModelPortal:E2RD69
Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989
NextBio:20854245 Uniprot:E2RD69
Length = 463
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
Score = 144 (55.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDTFLMEM 455
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKETIG-----D 266
+D C++ R R Q R+ + L+M AV RQ + ER + D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEADCANSGHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>UNIPROTKB|Q0GFF6 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:DQ866834 EMBL:AY429474
RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6
SMR:Q0GFF6 STRING:Q0GFF6 Ensembl:ENSSSCT00000006936 GeneID:445465
KEGG:ssc:445465 Uniprot:Q0GFF6
Length = 463
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
Score = 144 (55.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDTFLMEM 455
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKETIG-----D 266
+D C++ R R Q R+ + L+M AV RQ + ER + D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>MGI|MGI:98216 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98216 GO:GO:0005634
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
GO:GO:0032526 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:M84819 EMBL:X66225 EMBL:S62948
EMBL:BC058401 IPI:IPI00124345 PIR:B41727 PIR:S26670
RefSeq:NP_001153203.1 RefSeq:NP_033133.1 UniGene:Mm.3475
ProteinModelPortal:P28705 SMR:P28705 STRING:P28705
PhosphoSite:P28705 PRIDE:P28705 Ensembl:ENSMUST00000015987
Ensembl:ENSMUST00000111384 Ensembl:ENSMUST00000111386 GeneID:20183
KEGG:mmu:20183 UCSC:uc007dla.2 InParanoid:P28705 BindingDB:P28705
ChEMBL:CHEMBL4402 NextBio:297713 Bgee:P28705 CleanEx:MM_RXRG
Genevestigator:P28705 GermOnline:ENSMUSG00000015843 Uniprot:P28705
Length = 463
Score = 274 (101.5 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEM 455
Score = 144 (55.7 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDSFLMEM 455
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKETIG-----D 266
+D C++ R R Q R+ + L+M AV RQ + ER + D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSSHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>RGD|620046 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0007422
"peripheral nervous system development" evidence=IEP] [GO:0007507
"heart development" evidence=IEP] [GO:0007519 "skeletal muscle
tissue development" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620046
GO:GO:0005634 GO:GO:0007507 GO:GO:0030182 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007422 GO:GO:0014070 GO:GO:0032526 GO:GO:0032870
GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HSSP:P19793 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:BC091363 IPI:IPI00363863
RefSeq:NP_113953.1 UniGene:Rn.40816 ProteinModelPortal:Q5BJR8
SMR:Q5BJR8 STRING:Q5BJR8 PhosphoSite:Q5BJR8
Ensembl:ENSRNOT00000006117 GeneID:83574 KEGG:rno:83574
UCSC:RGD:620046 InParanoid:Q5BJR8 BindingDB:Q5BJR8
ChEMBL:CHEMBL4277 NextBio:616077 ArrayExpress:Q5BJR8
Genevestigator:Q5BJR8 Uniprot:Q5BJR8
Length = 463
Score = 273 (101.2 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 57/179 (31%), Positives = 96/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 277 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 336
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL + VE L+++
Sbjct: 337 SAHSAGVGSIFDRVLTELVSKMKDMRMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 397 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
Score = 144 (55.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 380 DAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 439
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 440 FKLIGDTPIDTFLMEM 455
Score = 43 (20.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV---RQSTIERLFFKE---TIG--D 266
+D C++ R R Q R+ + L+M AV RQ + ER + + G D
Sbjct: 176 RDNKDCLIDKRQRNRC--QYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASTGHED 233
Query: 267 IPIQRLLGDMYTMEKSYETPG 287
+P++R+L +E E+ G
Sbjct: 234 MPVERILEAELAVEPKTESYG 254
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 277 (102.6 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 71/215 (33%), Positives = 113/215 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + F L + L++ W ELF+L
Sbjct: 400 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPAFLALGQECNTALVRACWNELFIL 455
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDDV-RVNNE-IKLIQEILARFRQ-------LSPD 185
LAQ + LS ++ + DV ++++E IKL+ E + + ++ L D
Sbjct: 456 GLAQCAQIMSLSTILTAIVNHLQSSIQDVDKLSSERIKLVMEHIWKLQEFCNSMAKLQTD 515
Query: 186 GSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLP 245
E +KA++LF+P+ PGL +E Q++AQ L DYV+ Y + R R+LL LP
Sbjct: 516 AYEYAYLKAIVLFSPDHPGLSSCSQIEKFQEKAQMELQDYVQKTYPDETYRLARILLRLP 575
Query: 246 SLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
+LR + S E LFF IG++PI ++ + ME
Sbjct: 576 ALRLMSSSITEELFFTGLIGNVPIDSIIPYILKME 610
Score = 145 (56.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL +E Q++AQ L DYV+ Y + R R+LL LP+LR + S E L
Sbjct: 529 SPDHPGLSSCSQIEKFQEKAQMELQDYVQKTYPDETYRLARILLRLPALRLMSSSITEEL 588
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++PI ++ + ME
Sbjct: 589 FFTGLIGNVPIDSIIPYILKME 610
Score = 42 (19.8 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 178 RFRQLSPDGSECGCMKAVILFTPET 202
+F SPDGS G V+L +PE+
Sbjct: 79 QFLLASPDGSPAG---KVLLASPES 100
>UNIPROTKB|F1NSP3 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 IPI:IPI00600229 EMBL:AADN02034021 EMBL:AADN02034022
EMBL:AADN02034023 Ensembl:ENSGALT00000005387 OMA:FIKFPAG
Uniprot:F1NSP3
Length = 467
Score = 273 (101.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 281 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 340
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL VE L+++
Sbjct: 341 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREK 400
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 401 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 384 DAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 443
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 444 FKLIGDTPIDTFLMEM 459
>UNIPROTKB|P28701 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 EMBL:X58997 EMBL:S72435 IPI:IPI00584417 IPI:IPI00600229
PIR:A43781 PIR:S46479 RefSeq:NP_990625.1 UniGene:Gga.717
ProteinModelPortal:P28701 SMR:P28701 STRING:P28701 GeneID:396231
KEGG:gga:396231 InParanoid:P28701 NextBio:20816283 Uniprot:P28701
Length = 467
Score = 273 (101.2 bits), Expect = 2.5e-23, P = 2.5e-23
Identities = 57/179 (31%), Positives = 95/179 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L+ DQ++LL+ W EL + + S+ +L+ R
Sbjct: 281 LFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRS 340
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D SE GC++A++LF P+ GL VE L+++
Sbjct: 341 SAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREK 400
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 401 VYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
Score = 143 (55.4 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 384 DAKGLSSPSEVESLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 443
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 444 FKLIGDTPIDTFLMEM 459
>RGD|3200 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048386 "positive regulation of retinoic
acid receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3200 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 EMBL:CH473960 HSSP:P03372 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:L26398 EMBL:BC061822
IPI:IPI00208150 RefSeq:NP_665723.1 UniGene:Rn.79894
ProteinModelPortal:Q8VIJ4 SMR:Q8VIJ4 STRING:Q8VIJ4 PhosphoSite:Q8VIJ4
PRIDE:Q8VIJ4 Ensembl:ENSRNOT00000009578 GeneID:252924 KEGG:rno:252924
UCSC:RGD:3200 InParanoid:Q8VIJ4 NextBio:624089 ArrayExpress:Q8VIJ4
Genevestigator:Q8VIJ4 Uniprot:Q8VIJ4
Length = 590
Score = 276 (102.2 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 72/237 (30%), Positives = 119/237 (50%)
Query: 52 PSGLKXXXXXXXXXXXMFLATHQPPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAP 111
PS ++ +F T P P P L + E+ +RLLF+++ W +
Sbjct: 346 PSCMEREGPLLSDSHVVFRLT-MPSPMPEYLNV----HYIGESASRLLFLSMHWALSIPS 400
Query: 112 FQTLSKRDQLLLLQESWKELFLLHLAQ-W---SIPWDLSLLINC---EKARERLPPDDVR 164
FQ L + + + L++ W ELF L LAQ W ++ L+ +NC ++++ P+ +
Sbjct: 401 FQALGQENSISLVKAYWNELFTLGLAQCWQVMNVATILATFVNCLHNSLQQDKMSPERRK 460
Query: 165 VNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILG 223
+ E I +QE +L DG E +KA++LF+P+ PGL + + +E Q++A
Sbjct: 461 LLMEHIFKLQEFCNSMVKLCIDGHEYAYLKAIVLFSPDHPGLENMELIEKFQEKAYVEFQ 520
Query: 224 DYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
DY+ Y R RLLL LP+LR + + E LFFK IG++ I ++ + ME
Sbjct: 521 DYITRTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNVRIDSVIPHILKME 577
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 496 SPDHPGLENMELIEKFQEKAYVEFQDYITRTYPDDTYRLSRLLLRLPALRLMNATITEEL 555
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG++ I ++ + ME
Sbjct: 556 FFKGLIGNVRIDSVIPHILKME 577
>UNIPROTKB|Q26622 [details] [associations]
symbol:SHR2 "Orphan steroid hormone receptor 2"
species:7668 "Strongylocentrotus purpuratus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0048471 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045177
GO:GO:0030522 GO:GO:0005652 eggNOG:NOG297520 KO:K14031 EMBL:U38281
EMBL:U38528 EMBL:U38529 RefSeq:NP_001116968.1 UniGene:Spu.209
ProteinModelPortal:Q26622 SMR:Q26622 GeneID:373398 KEGG:spu:373398
CTD:373398 Uniprot:Q26622
Length = 583
Score = 274 (101.5 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 73/233 (31%), Positives = 119/233 (51%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R L FQ LS ++Q+ W ELF L
Sbjct: 354 PSPMPQFLNVHYI---C-ESASRLLFLSMHWARSLPAFQVLSADTHTSMVQKCWSELFTL 409
Query: 135 HLAQWSIPWDLSLLINC-------EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ + LS ++ +++L D V+ V I +QE + +L D
Sbjct: 410 GLAQCAQAMALSTILTAIVNHLQTSLQQDKLSADRVKAVMEHIWKLQEFVTTTSKLDVDQ 469
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
+E +K ++LF+P+ PGL + + +E Q+ A L DY Y + RF +LLL LP+
Sbjct: 470 TEFAYLKTIVLFSPDHPGLSNVRQIEKFQEMAISELHDYEAQTYPSKLNRFSKLLLRLPT 529
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS-YETPGL-VDAQPVEML 297
LR + + +E LFF IG++ I ++ + ME + Y + + + A P ++
Sbjct: 530 LRLLSPAIMEELFFAGLIGNVQIDSIIPYILRMETADYNSAQITMSASPGSLI 582
Score = 125 (49.1 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q+ A L DY Y + RF +LLL LP+LR + + +E L
Sbjct: 482 SPDHPGLSNVRQIEKFQEMAISELHDYEAQTYPSKLNRFSKLLLRLPTLRLLSPAIMEEL 541
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 542 FFAGLIGNVQIDSIIPYILRME 563
>UNIPROTKB|F1NW94 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00586813
Ensembl:ENSGALT00000018481 ArrayExpress:F1NW94 Uniprot:F1NW94
Length = 562
Score = 273 (101.2 bits), Expect = 5.0e-23, P = 5.0e-23
Identities = 74/220 (33%), Positives = 112/220 (50%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C ET +RLLF+++ W R + FQ L + + + L++ W ELF L
Sbjct: 340 PSPMPEYLNVHYI---C-ETASRLLFLSMHWARSIPSFQALGQDNSISLVKACWNELFTL 395
Query: 135 HLAQWS----IPWDLSLLINC---EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S + L+ +N +++LP D + V I +QE +L DG
Sbjct: 396 GLAQCSQVMNVATILAAFVNHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDG 455
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + +E Q++A DYV Y R RLLL LP+
Sbjct: 456 YEYAYLKAIVLFSPDHPGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPA 515
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS-YET 285
LR + + E LFF IG++ I ++ + ME + Y T
Sbjct: 516 LRLMSAAITEELFFAGLIGNVQIDSIIPYILRMETADYNT 555
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E Q++A DYV Y R RLLL LP+LR + + E L
Sbjct: 468 SPDHPGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALRLMSAAITEEL 527
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 528 FFAGLIGNVQIDSIIPYILRME 549
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 273 (101.2 bits), Expect = 5.7e-23, P = 5.7e-23
Identities = 67/214 (31%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 368 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 423
Query: 135 HLAQ-W---SIPWDLSLLINCEKA---RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC + ++++ P+ + + I +QE +L DG
Sbjct: 424 GLAQCWQVMNVATILATFVNCLHSSLQQDKMSPERRKSLMEHIFKLQEFCNSMVKLCIDG 483
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 484 HEYAYLKAIVLFSPDHPGLENMELIERFQEKAYVEFQDYITRTYPDDTYRLSRLLLRLPA 543
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG++ I ++ + ME
Sbjct: 544 LRLMNATITEELFFKGLIGNVRIDSVIPHILKME 577
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/119 (30%), Positives = 59/119 (49%)
Query: 251 RQSTIERLFFKETIGDIPIQRLL-GDMYTMEK-----SYETPGLVDAQPVEMLQDQAQCI 304
R+S +E +F + + ++ + G Y K S + PGL + + +E Q++A
Sbjct: 459 RKSLMEHIFKLQEFCNSMVKLCIDGHEYAYLKAIVLFSPDHPGLENMELIERFQEKAYVE 518
Query: 305 LGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 363
DY+ Y R RLLL LP+LR + + E LFFK IG++ I ++ + ME
Sbjct: 519 FQDYITRTYPDDTYRLSRLLLRLPALRLMNATITEELFFKGLIGNVRIDSVIPHILKME 577
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 64/206 (31%), Positives = 105/206 (50%)
Query: 72 THQPPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKEL 131
T P P+ + I +A+K LF V W + + F +L DQ++LL+ W EL
Sbjct: 186 TGAPSPNDPVTNICQAADK-------QLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNEL 238
Query: 132 FLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECG 190
+ + SI +L+ R V +++ E++++ R + D +E G
Sbjct: 239 LIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELG 298
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
C++A+ILF P+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++
Sbjct: 299 CLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSI 358
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
+E LFF + IGD PI L +M
Sbjct: 359 GLKCLEHLFFFKLIGDTPIDTFLMEM 384
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 309 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 368
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 369 FKLIGDTPIDTFLMEM 384
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 268 (99.4 bits), Expect = 6.8e-23, P = 6.8e-23
Identities = 59/187 (31%), Positives = 97/187 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + S+ +L+
Sbjct: 248 CQAADKQL-FTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLA 306
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V + +++ E++++ R + D +E GC++A++LF P+ GL +
Sbjct: 307 TGLHVHRSSAHSAGVGSIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSNPS 366
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 367 EVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 426
Query: 270 QRLLGDM 276
L +M
Sbjct: 427 DTFLMEM 433
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE L+++ L Y + Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 358 DAKGLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFF 417
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 418 FKLIGDTPIDTFLMEM 433
>UNIPROTKB|E1BZA2 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0016605 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 GO:GO:0048386
GeneTree:ENSGT00700000104390 OMA:QNSNEMS EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00681663
Ensembl:ENSGALT00000030638 ArrayExpress:E1BZA2 Uniprot:E1BZA2
Length = 639
Score = 273 (101.2 bits), Expect = 7.0e-23, P = 7.0e-23
Identities = 74/220 (33%), Positives = 112/220 (50%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C ET +RLLF+++ W R + FQ L + + + L++ W ELF L
Sbjct: 417 PSPMPEYLNVHYI---C-ETASRLLFLSMHWARSIPSFQALGQDNSISLVKACWNELFTL 472
Query: 135 HLAQWS----IPWDLSLLINC---EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S + L+ +N +++LP D + V I +QE +L DG
Sbjct: 473 GLAQCSQVMNVATILAAFVNHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDG 532
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + +E Q++A DYV Y R RLLL LP+
Sbjct: 533 YEYAYLKAIVLFSPDHPGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPA 592
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS-YET 285
LR + + E LFF IG++ I ++ + ME + Y T
Sbjct: 593 LRLMSAAITEELFFAGLIGNVQIDSIIPYILRMETADYNT 632
Score = 120 (47.3 bits), Expect = 0.00039, P = 0.00039
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E Q++A DYV Y R RLLL LP+LR + + E L
Sbjct: 545 SPDHPGLENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALRLMSAAITEEL 604
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FF IG++ I ++ + ME
Sbjct: 605 FFAGLIGNVQIDSIIPYILRME 626
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 196 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 254
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 255 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 314
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 315 EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 374
Query: 270 QRLLGDM 276
L +M
Sbjct: 375 DTFLMEM 381
Score = 137 (53.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 306 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 365
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 366 FKLIGDTPIDTFLMEM 381
>UNIPROTKB|F1SQP7 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0048386
GeneTree:ENSGT00700000104390 KO:K08543 OMA:QNSNEMS EMBL:FP236518
RefSeq:XP_003126756.1 Ensembl:ENSSSCT00000000986 GeneID:100516014
KEGG:ssc:100516014 Uniprot:F1SQP7
Length = 605
Score = 271 (100.5 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 68/214 (31%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 383 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 438
Query: 135 HLAQ-W---SIPWDLSLLINCEKA---RERLPPDDVRVNNE-IKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC + ++++ + +V E I +QE +L DG
Sbjct: 439 GLAQCWQVMNVATILATFVNCLHSSLQQDKMSTERRKVLMEHIFKLQEFCNSMVKLCIDG 498
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 499 YEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPA 558
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG++ I ++ + ME
Sbjct: 559 LRLMNATITEELFFKGLIGNVRIDSVIPHILKME 592
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 511 SPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 570
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG++ I ++ + ME
Sbjct: 571 FFKGLIGNVRIDSVIPHILKME 592
>MGI|MGI:98214 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001890 "placenta development"
evidence=IMP] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003677 "DNA binding" evidence=ISO;IDA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IGI] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;IDA] [GO:0004886 "9-cis retinoic acid receptor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0007507 "heart development" evidence=IMP;TAS]
[GO:0007566 "embryo implantation" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=TAS] [GO:0019048 "virus-host interaction"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0031641 "regulation of myelination"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO;IDA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=TAS] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IGI;IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IGI;IMP;TAS]
[GO:0060485 "mesenchyme development" evidence=TAS] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060978 "angiogenesis involved in
coronary vascular morphogenesis" evidence=TAS] [GO:0061032
"visceral serous pericardium development" evidence=TAS]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98214 GO:GO:0019048 GO:GO:0008285
GO:GO:0005654 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0006954 GO:GO:0045944
GO:GO:0051384 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790 GO:GO:0032526
GO:GO:0060978 GO:GO:0003690 GO:GO:0010629 GO:GO:0001893
GO:GO:0033189 GO:GO:0010269 GO:GO:0031490 GO:GO:0033280
GO:GO:0007566 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 Reactome:REACT_27166 HOVERGEN:HBG005606 GO:GO:0061032
GO:GO:0060528 GO:GO:0060485 GeneTree:ENSGT00690000101777
GO:GO:0035357 PDB:1XDK PDBsum:1XDK GO:GO:0055012 GO:GO:0044323
PDB:3A9E PDBsum:3A9E PDB:1DKF PDBsum:1DKF HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 OMA:KHFLPLD EMBL:M84817 EMBL:X66223
IPI:IPI00467109 PIR:S26668 RefSeq:NP_035435.1 UniGene:Mm.24624
ProteinModelPortal:P28700 SMR:P28700 IntAct:P28700
MINT:MINT-2775018 STRING:P28700 PhosphoSite:P28700 PRIDE:P28700
Ensembl:ENSMUST00000077257 Ensembl:ENSMUST00000166775 GeneID:20181
KEGG:mmu:20181 InParanoid:P28700 BindingDB:P28700 ChEMBL:CHEMBL3084
ChiTaRS:RXRA EvolutionaryTrace:P28700 NextBio:297705 Bgee:P28700
CleanEx:MM_RXRA Genevestigator:P28700 GermOnline:ENSMUSG00000015846
GO:GO:0070644 Uniprot:P28700
Length = 467
Score = 267 (99.0 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 274 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 332
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 333 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPA 392
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 393 EVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 452
Query: 270 QRLLGDM 276
L +M
Sbjct: 453 DTFLMEM 459
Score = 142 (55.0 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 384 DSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 443
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 444 FKLIGDTPIDTFLMEM 459
>UNIPROTKB|P51128 [details] [associations]
symbol:rxra "Retinoic acid receptor RXR-alpha" species:8355
"Xenopus laevis" [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11446
PIR:C41977 ProteinModelPortal:P51128 SMR:P51128 Uniprot:P51128
Length = 488
Score = 266 (98.7 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F L DQ++LL+ W EL + + SI +L+
Sbjct: 295 CQAADKQL-FTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLA 353
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A++LF P++ GL +
Sbjct: 354 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPL 413
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 414 EVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 473
Query: 270 QRLLGDM 276
L +M
Sbjct: 474 DTFLMEM 480
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/76 (39%), Positives = 45/76 (59%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
++ GL + VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LFF
Sbjct: 405 DSKGLSNPLEVEALREKVYASLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFF 464
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 465 FKLIGDTPIDTFLMEM 480
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 268 (99.4 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 67/214 (31%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 383 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 438
Query: 135 HLAQ-W---SIPWDLSLLINCEKA---RERLPPDDVRVNNE-IKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC + ++++ + ++ E I +QE +L DG
Sbjct: 439 GLAQCWQVMNVATILATFVNCLHSSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDG 498
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 499 YEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPA 558
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG++ I ++ + ME
Sbjct: 559 LRLMNATITEELFFKGLIGNVRIDSVIPHILKME 592
Score = 129 (50.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 511 SPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 570
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG++ I ++ + ME
Sbjct: 571 FFKGLIGNVRIDSVIPHILKME 592
Score = 39 (18.8 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 231 SRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
SRQ + G++ L P V Q LFF T D+ Q L
Sbjct: 60 SRQDSTPGKVFLTTPDAAGVNQ-----LFF--TTPDLSAQHL 94
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 268 (99.4 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 67/214 (31%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 386 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 441
Query: 135 HLAQ-W---SIPWDLSLLINCEKA---RERLPPDDVRVNNE-IKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC + ++++ + ++ E I +QE +L DG
Sbjct: 442 GLAQCWQVMNVATILATFVNCLHSSLQQDKISAERRKLLMEHIFKLQEFCNSMVKLCIDG 501
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 502 YEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPA 561
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG++ I ++ + ME
Sbjct: 562 LRLMNATITEELFFKGLIGNVRIDSVIPHILKME 595
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 514 SPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 573
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG++ I ++ + ME
Sbjct: 574 FFKGLIGNVRIDSVIPHILKME 595
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 268 (99.4 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 67/214 (31%), Positives = 112/214 (52%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 386 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 441
Query: 135 HLAQ-W---SIPWDLSLLINCEKA---RERLPPDDVRVNNE-IKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC + ++++ + ++ E I +QE +L DG
Sbjct: 442 GLAQCWQVMNVATILATFVNCLHSSLQQDKISAERRKLLMEHIFKLQEFCNSMVKLCIDG 501
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ PGL + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 502 YEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPA 561
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG++ I ++ + ME
Sbjct: 562 LRLMNATITEELFFKGLIGNVRIDSVIPHILKME 595
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 514 SPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 573
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG++ I ++ + ME
Sbjct: 574 FFKGLIGNVRIDSVIPHILKME 595
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 60/191 (31%), Positives = 99/191 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 150 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 208
Query: 151 CEKARERLPPDDVRVN-----NEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
R V + +++ E++++ R + D +E GC++A+ILF P+ GL
Sbjct: 209 TGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGL 268
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
+ VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IG
Sbjct: 269 SNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 328
Query: 266 DIPIQRLLGDM 276
D PI L +M
Sbjct: 329 DTPIDTFLMEM 339
Score = 137 (53.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 264 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 323
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 324 FKLIGDTPIDTFLMEM 339
>ZFIN|ZDB-GENE-041210-198 [details] [associations]
symbol:nr2c1 "nuclear receptor subfamily 2, group
C, member 1" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041210-198 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596
OMA:MEHIWRM EMBL:BX640593 IPI:IPI00494218 UniGene:Dr.42016
SMR:Q5RH32 Ensembl:ENSDART00000066948 Ensembl:ENSDART00000128968
InParanoid:Q5RH32 Uniprot:Q5RH32
Length = 600
Score = 264 (98.0 bits), Expect = 5.7e-22, P = 5.7e-22
Identities = 70/216 (32%), Positives = 110/216 (50%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + FQ L + + L++ W ELF L
Sbjct: 378 PLPMPDFLNLNYI---C-ESASRLLFLSMHWARSIPAFQALGSENGITLMKACWNELFAL 433
Query: 135 HLAQWS----IPWDLSLLINCEKA---RERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ S + L+ +IN + E+L P+ V+ V I +QE ++SPD
Sbjct: 434 GLAQCSHIMNVETILTAIINHLQTSLDEEKLSPERVKQVMEHIWRMQEFCNSMSRMSPDA 493
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KAV+LF+P+ + +E Q++A L DYV Y R +LL+ LP+
Sbjct: 494 YEYAYLKAVVLFSPDHSAVDGTLQIERFQEKAYMELQDYVSKVYPEDTYRLSKLLVRLPA 553
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS 282
LR + + E LFF IG++ I ++ + ME +
Sbjct: 554 LRLMSAAVTEELFFAGLIGNVQIDSIIPYILKMEST 589
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 263 (97.6 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 67/214 (31%), Positives = 110/214 (51%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + E+ +RLLF+++ W + FQ L + + + L++ W ELF L
Sbjct: 381 PSPMPEYLNV----HYIGESASRLLFLSMHWALSIPSFQALGQENSISLVKAYWNELFTL 436
Query: 135 HLAQ-W---SIPWDLSLLINC---EKARERLPPDDVRVNNE-IKLIQEILARFRQLSPDG 186
LAQ W ++ L+ +NC ++++ + ++ E I +QE +L DG
Sbjct: 437 GLAQCWQVMNVATILATFVNCLHNSLQQDKMSTERRKLLMEHIFKLQEFCNSMVKLCIDG 496
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA++LF+P+ P L + + +E Q++A DY+ Y R RLLL LP+
Sbjct: 497 YEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPA 556
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTME 280
LR + + E LFFK IG+I I ++ + ME
Sbjct: 557 LRLMNATITEELFFKGLIGNIRIDSVIPHILKME 590
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + P L + + +E Q++A DY+ Y R RLLL LP+LR + + E L
Sbjct: 509 SPDHPSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLRLPALRLMNATITEEL 568
Query: 342 FFKETIGDIPIQRLLGDMYTME 363
FFK IG+I I ++ + ME
Sbjct: 569 FFKGLIGNIRIDSVIPHILKME 590
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 262 (97.3 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 70/216 (32%), Positives = 109/216 (50%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P P P L + C E+ +RLLF+++ W R + F +L + + + L++ W ELF L
Sbjct: 415 PSPMPEYLNVHYI---C-ESASRLLFLSMHWARSIPSFLSLGQENSISLVKACWNELFSL 470
Query: 135 HLAQ----WSIPWDLSLLINC---EKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDG 186
LAQ ++ L+ +N ++L D V+ V + I +QE + DG
Sbjct: 471 GLAQCCQVMNVETILAAFVNHLHNSMQHDKLSSDKVKLVMDHIFKLQEFCNSMVKRCVDG 530
Query: 187 SECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPS 246
E +KA+ LF+P+ PGL + +E LQ++A DYV Y R RLLL LP+
Sbjct: 531 YEYAYLKAIALFSPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPA 590
Query: 247 LRAVRQSTIERLFFKETIGDIPIQRLLGDMYTMEKS 282
LR + + E LFF IG++ I ++ + ME S
Sbjct: 591 LRLLNAAITEELFFAGLIGNVQIDSIIPYILRMETS 626
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + PGL + +E LQ++A DYV Y R RLLL LP+LR + + E L
Sbjct: 543 SPDHPGLENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLLNAAITEEL 602
Query: 342 FFKETIGDIPIQRLLGDMYTMEKS 365
FF IG++ I ++ + ME S
Sbjct: 603 FFAGLIGNVQIDSIIPYILRMETS 626
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 261 (96.9 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 60/187 (32%), Positives = 98/187 (52%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 327 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 385
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 386 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPG 445
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IGD PI
Sbjct: 446 EVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 505
Query: 270 QRLLGDM 276
L +M
Sbjct: 506 DTFLMEM 512
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 437 DAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 496
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 497 FKLIGDTPIDTFLMEM 512
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 256 (95.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 60/191 (31%), Positives = 99/191 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 339 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 397
Query: 151 CEKARERLPPDDVRVN-----NEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
R V + +++ E++++ R + D +E GC++A+ILF P+ GL
Sbjct: 398 TGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGL 457
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
+ VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IG
Sbjct: 458 SNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 517
Query: 266 DIPIQRLLGDM 276
D PI L +M
Sbjct: 518 DTPIDTFLMEM 528
Score = 137 (53.3 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 453 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 512
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 513 FKLIGDTPIDTFLMEM 528
Score = 39 (18.8 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 30 SPDLLPPNGISSVKIPPT---VLYPPS 53
SPD PN +S PP+ + PPS
Sbjct: 81 SPDSSSPNPLSQGAPPPSPPGLPLPPS 107
>ZFIN|ZDB-GENE-040718-34 [details] [associations]
symbol:rxrgb "retinoid X receptor, gamma b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040718-34 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 InterPro:IPR021780 Pfam:PF11825
EMBL:BX296562 IPI:IPI00972012 Ensembl:ENSDART00000110950
Bgee:F1QDD2 Uniprot:F1QDD2
Length = 458
Score = 259 (96.2 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 57/180 (31%), Positives = 96/180 (53%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
LF V W + + F L DQ++LL+ W EL + + SI +L+ R
Sbjct: 271 LFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSITVKDGILLGTGLHVHRS 330
Query: 159 PPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
V + +++ E++++ + + D +E GC++A++LF P+ GL ++ VE L+++
Sbjct: 331 SAHSAGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNSLEVEALREK 390
Query: 218 AQCILGDYVRGRYSRQP-TRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
L Y + +Y QP RF +LLL LP+LR++ +E LFF + IGD PI L +M
Sbjct: 391 VYASLETYTKQKYPDQPGRRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 450
Score = 134 (52.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQP-TRFGRLLLMLPSLRAVRQSTIERLF 342
+ GL ++ VE L+++ L Y + +Y QP RF +LLL LP+LR++ +E LF
Sbjct: 374 DAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRRFAKLLLRLPALRSIGLKCLEHLF 433
Query: 343 FKETIGDIPIQRLLGDM 359
F + IGD PI L +M
Sbjct: 434 FFKLIGDTPIDTFLMEM 450
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 254 (94.5 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 60/191 (31%), Positives = 99/191 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 325 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 383
Query: 151 CEKARERLPPDDVRVN-----NEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
R V + +++ E++++ R + D +E GC++A+ILF P+ GL
Sbjct: 384 TGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGL 443
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
+ VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IG
Sbjct: 444 SNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 503
Query: 266 DIPIQRLLGDM 276
D PI L +M
Sbjct: 504 DTPIDTFLMEM 514
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 439 DAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 498
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 499 FKLIGDTPIDTFLMEM 514
Score = 39 (18.8 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 24 PHNPHHSPDLLPPNGISS 41
PH P P +PP + S
Sbjct: 99 PHTPSAPPPPMPPPPLGS 116
Score = 38 (18.4 bits), Expect = 9.2e-21, Sum P(2) = 9.2e-21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN +S IPP+ PP
Sbjct: 77 SPDSSSPNPLSQ-GIPPSS--PP 96
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 256 (95.2 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 60/191 (31%), Positives = 99/191 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 217 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 275
Query: 151 CEKARERLPPDDVRVN-----NEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
R V + +++ E++++ R + D +E GC++A+ILF P+ GL
Sbjct: 276 TGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGL 335
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
+ VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF + IG
Sbjct: 336 SNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG 395
Query: 266 DIPIQRLLGDM 276
D PI L +M
Sbjct: 396 DTPIDTFLMEM 406
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 331 DAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFF 390
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 391 FKLIGDTPIDTFLMEM 406
>UNIPROTKB|F1NZ15 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005504 "fatty
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006591 "ornithine
metabolic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0007548 "sex differentiation" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0019216 "regulation
of lipid metabolic process" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0060395 "SMAD protein
signal transduction" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0030308 GO:GO:0046872
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 GeneTree:ENSGT00690000101777
OMA:PAFCDLP EMBL:AADN02019318 IPI:IPI00574089
Ensembl:ENSGALT00000006810 ArrayExpress:F1NZ15 Uniprot:F1NZ15
Length = 455
Score = 253 (94.1 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 65/200 (32%), Positives = 105/200 (52%)
Query: 88 AEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSL 147
A+ C+ +LL + V W + + F L DQ+ LL+ E LL +A+ S+ + L
Sbjct: 176 ADVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSMVFKDVL 234
Query: 148 LINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLV 206
L+ + R P+ V V+ I+++ E++ F++L D +E C+KA+I F P+ GL
Sbjct: 235 LLGNDHIVPRNCPELVEVSRVAIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLS 294
Query: 207 DAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGD 266
D ++ ++ Q Q L DY+ R RFG LLL+LP L+++ IE++ F + G
Sbjct: 295 DPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSITWQMIEQIQFVKLFGM 354
Query: 267 IPIQRLLGDMYTMEKSYETP 286
I LL +M S ETP
Sbjct: 355 AKIDNLLQEMLLGGSSSETP 374
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 250 (93.1 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 64/201 (31%), Positives = 100/201 (49%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F LS DQ++LL+ W EL + + SI +L+
Sbjct: 264 CQAADKQL-FTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASFSHRSITVKDGILLA 322
Query: 151 CEKARERLPPDDVRV----------NNEI-----KLIQEILARFRQLSPDGSECGCMKAV 195
R V N E+ +++ E++++ R + D +E GC++A+
Sbjct: 323 TGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAI 382
Query: 196 ILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTI 255
ILF P+ GL VE+L+++ L Y + RY Q RF +LLL LP+LR++ +
Sbjct: 383 ILFNPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCL 442
Query: 256 ERLFFKETIGDIPIQRLLGDM 276
E LFF + IGD PI L +M
Sbjct: 443 EHLFFFKLIGDTPIDTFLMEM 463
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL VE+L+++ L Y + RY Q RF +LLL LP+LR++ +E LFF
Sbjct: 388 DAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFF 447
Query: 344 KETIGDIPIQRLLGDM 359
+ IGD PI L +M
Sbjct: 448 FKLIGDTPIDTFLMEM 463
>RGD|68353 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005543
"phospholipid binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0008206 "bile acid metabolic process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:68353 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0003690 GO:GO:0045070 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:AB012960 EMBL:AB012961
IPI:IPI00212414 IPI:IPI00212417 RefSeq:NP_068510.1 UniGene:Rn.42941
ProteinModelPortal:Q9QWM1 SMR:Q9QWM1 STRING:Q9QWM1
PhosphoSite:Q9QWM1 Ensembl:ENSRNOT00000000811
Ensembl:ENSRNOT00000000812 GeneID:60349 KEGG:rno:60349
UCSC:RGD:68353 InParanoid:Q9QWM1 NextBio:612007
Genevestigator:Q9QWM1 GermOnline:ENSRNOG00000000653 Uniprot:Q9QWM1
Length = 560
Score = 248 (92.4 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 63/183 (34%), Positives = 96/183 (52%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL-AQWSIPWDLSL-LINCEKA- 154
LF V W R F+ L DQ+ LLQ W EL +L H+ Q + + ++ L+ E
Sbjct: 372 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVD 431
Query: 155 -RERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +V NN + L QE++ R R L D E C+K ++LF+ + L + Q VE
Sbjct: 432 YSSIISNTEVAFNNLLSLAQELVVRLRSLQFDQREFVCLKFLVLFSSDVKNLENFQLVEG 491
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ + + L++K GD+P LL
Sbjct: 492 VQEQVNAALLDYTLCNYPQQTEKFGQLLLRLPEIRAISKQAEDYLYYKHVNGDVPYNNLL 551
Query: 274 GDM 276
+M
Sbjct: 552 IEM 554
Score = 134 (52.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ + + L
Sbjct: 477 SSDVKNLENFQLVEGVQEQVNAALLDYTLCNYPQQTEKFGQLLLRLPEIRAISKQAEDYL 536
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 537 YYKHVNGDVPYNNLLIEM 554
>MGI|MGI:1346834 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005543
"phospholipid binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0008206 "bile acid metabolic process" evidence=IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Reactome:REACT_13641 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1346834 GO:GO:0005829 GO:GO:0005634
GO:GO:0008206 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018 GO:GO:0045070
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 PDB:3F5C PDBsum:3F5C PDB:1ZH7 PDBsum:1ZH7
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:M81385 EMBL:BC137845
IPI:IPI00129665 PIR:S27874 RefSeq:NP_109601.1 UniGene:Mm.16794
PDB:1PK5 PDBsum:1PK5 ProteinModelPortal:P45448 SMR:P45448
STRING:P45448 PhosphoSite:P45448 PRIDE:P45448
Ensembl:ENSMUST00000027649 GeneID:26424 KEGG:mmu:26424
UCSC:uc007cvc.2 InParanoid:P45448 EvolutionaryTrace:P45448
NextBio:304453 Bgee:P45448 CleanEx:MM_NR5A2 Genevestigator:P45448
GermOnline:ENSMUSG00000026398 Uniprot:P45448
Length = 560
Score = 247 (92.0 bits), Expect = 7.0e-19, P = 7.0e-19
Identities = 63/183 (34%), Positives = 96/183 (52%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL-AQWSIPWDLSL-LINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ Q + + ++ L+ E
Sbjct: 372 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVD 431
Query: 156 ER--LPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +V NN + L QE++ R R L D E C+K ++LF+ + L + Q VE
Sbjct: 432 YSTIISHTEVAFNNLLSLAQELVVRLRSLQFDQREFVCLKFLVLFSSDVKNLENLQLVEG 491
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ + + L++K GD+P LL
Sbjct: 492 VQEQVNAALLDYTVCNYPQQTEKFGQLLLRLPEIRAISKQAEDYLYYKHVNGDVPYNNLL 551
Query: 274 GDM 276
+M
Sbjct: 552 IEM 554
Score = 134 (52.2 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ + + L
Sbjct: 477 SSDVKNLENLQLVEGVQEQVNAALLDYTVCNYPQQTEKFGQLLLRLPEIRAISKQAEDYL 536
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 537 YYKHVNGDVPYNNLLIEM 554
>UNIPROTKB|Q1I181 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:CU062400
EMBL:DQ061106 RefSeq:NP_001038036.1 UniGene:Ssc.19208 SMR:Q1I181
STRING:Q1I181 Ensembl:ENSSSCT00000008067 GeneID:733636
KEGG:ssc:733636 Uniprot:Q1I181
Length = 474
Score = 243 (90.6 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 62/205 (30%), Positives = 104/205 (50%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I A+ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 180 KIASIADVCESMKEQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMV 238
Query: 143 WDLSLLINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
+ LL+ + R P+ +N ++++ E++ F++L D +E C+KA+I F P+
Sbjct: 239 FKDVLLLGNDYIIPRHCPELAEMNRVSVRILDELVLPFQELQVDDNEYACLKAIIFFDPD 298
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 299 AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFI 358
Query: 262 ETIGDIPIQRLLGDMYTMEKSYETP 286
+ G I LL +M S + P
Sbjct: 359 KLFGMAKIDNLLQEMLLGGSSSDAP 383
>ZFIN|ZDB-GENE-990415-242 [details] [associations]
symbol:rxrbb "retinoid x receptor, beta b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:U29941 IPI:IPI00480966 PIR:I50516 RefSeq:NP_571313.1
UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486
KEGG:dre:30486 CTD:30486 NextBio:20806878 ArrayExpress:Q90417
Uniprot:Q90417
Length = 422
Score = 235 (87.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 58/201 (28%), Positives = 99/201 (49%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI--------- 141
CQ +L F V W + + F + DQ++LL+ W EL + + SI
Sbjct: 218 CQAADKQL-FTLVEWAKRVPHFSDVPLDDQVILLRAGWNELLIAAFSHRSISVKDEILLA 276
Query: 142 -----PWDLSLLINCEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAV 195
P + + + E +R V +++ E++ + R + D +E GC++A+
Sbjct: 277 TGLHVPKESTHNLGVEAFFDRESSHSAEVGALFDRVLTELVCKMRDMQMDKTELGCLRAI 336
Query: 196 ILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTI 255
+LF P+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +
Sbjct: 337 VLFNPDAKGLTSSSEVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCL 396
Query: 256 ERLFFKETIGDIPIQRLLGDM 276
E LFF + IG+ PI L +M
Sbjct: 397 EHLFFFKLIGNTPIDTFLMEM 417
Score = 135 (52.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + VE+L+++ L Y + +Y Q RF +LLL LP+LR++ +E LFF
Sbjct: 342 DAKGLTSSSEVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHLFF 401
Query: 344 KETIGDIPIQRLLGDM 359
+ IG+ PI L +M
Sbjct: 402 FKLIGNTPIDTFLMEM 417
Score = 39 (18.8 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 6 GPRKPKIHNAHHQDSKLEPHNPHHSPDLLPPNGISSV 42
GP N+ S+L H S D+ PP G+ SV
Sbjct: 43 GPISNSQINSSMSVSRL--HAVSSSDDVKPPFGLKSV 77
>UNIPROTKB|Q7YRQ5 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20153 EMBL:DAAA02036724 EMBL:AY318752 IPI:IPI00691213
RefSeq:NP_001015557.1 UniGene:Bt.107136 SMR:Q7YRQ5 STRING:Q7YRQ5
Ensembl:ENSBTAT00000016078 GeneID:509200 KEGG:bta:509200
InParanoid:Q7YRQ5 NextBio:20868867 Uniprot:Q7YRQ5
Length = 455
Score = 240 (89.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 62/205 (30%), Positives = 104/205 (50%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I A+ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 171 KIASIADVCESMKEQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMV 229
Query: 143 WDLSLLINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
+ LL+ + R P+ ++ ++++ E++ F++L D +E C+KA+I F P+
Sbjct: 230 FKDVLLLGNDYIVPRHCPELAEMSRVSVRILDELVLPFQELQIDDNEYACLKAIIFFDPD 289
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 290 AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFI 349
Query: 262 ETIGDIPIQRLLGDMYTMEKSYETP 286
+ G I LL +M S E P
Sbjct: 350 KLFGMAKIDNLLQEMLLGGSSSEAP 374
Score = 117 (46.2 bits), Expect = 0.00052, P = 0.00052
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 289 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 348
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 349 IKLFGMAKIDNLLQEM 364
>UNIPROTKB|B4E2P3 [details] [associations]
symbol:NR5A2 "cDNA FLJ52395, highly similar to Orphan
nuclear receptor NR5A2" species:9606 "Homo sapiens" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008206
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0042632 GO:GO:0042127 GO:GO:0030522
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 UniGene:Hs.33446 HGNC:HGNC:7984 EMBL:AC096633
EMBL:AK304365 EMBL:AK316513 IPI:IPI01009507 SMR:B4E2P3
STRING:B4E2P3 Ensembl:ENST00000544748 Uniprot:B4E2P3
Length = 469
Score = 238 (88.8 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 61/183 (33%), Positives = 95/183 (51%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQWSIPW-DLSL-LINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + + S+ L+ ++
Sbjct: 281 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVD 340
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 341 YSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEG 400
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 401 VQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLL 460
Query: 274 GDM 276
+M
Sbjct: 461 IEM 463
Score = 137 (53.3 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 386 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 445
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 446 YYKHLNGDVPYNNLLIEM 463
>UNIPROTKB|F1NVB5 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008206
"bile acid metabolic process" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0008206 GO:GO:0005543
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0045070 GeneTree:ENSGT00670000097927
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00679374 OMA:NTFGLMC
EMBL:AADN02033799 EMBL:AADN02033800 EMBL:AADN02033801
EMBL:AADN02033802 EMBL:AADN02033803 Ensembl:ENSGALT00000003418
ArrayExpress:F1NVB5 Uniprot:F1NVB5
Length = 501
Score = 238 (88.8 bits), Expect = 7.8e-18, P = 7.8e-18
Identities = 61/183 (33%), Positives = 93/183 (50%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQWSIPWDLS--LLINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + LL+ ++
Sbjct: 313 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSILLVTGQQVD 372
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 373 YSVIASQAGATLNNLMSHAQELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEG 432
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 433 VQEQVNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPCNNLL 492
Query: 274 GDM 276
+M
Sbjct: 493 IEM 495
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 418 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYL 477
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 478 YYKHLNGDVPCNNLLIEM 495
>ZFIN|ZDB-GENE-990415-79 [details] [associations]
symbol:nr5a2 "nuclear receptor subfamily 5, group A,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS;IDA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-79 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0051216
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 HSSP:P45448 EMBL:AL954148
EMBL:BC163522 EMBL:AY034061 IPI:IPI00511047 UniGene:Dr.6870
SMR:Q90YL6 STRING:Q90YL6 Ensembl:ENSDART00000127424
InParanoid:Q90YL6 Uniprot:Q90YL6
Length = 517
Score = 238 (88.8 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 63/183 (34%), Positives = 94/183 (51%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL-AQWSIPWDLS-LLINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ Q + S LL+ ++
Sbjct: 329 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHVFRQVMHAKEGSILLVTGQQVD 388
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
L +NN + QE++++ R L D E C+K ++LF+ + L + VE
Sbjct: 389 YALIASQAGATLNNLLSHAQELVSKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVES 448
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DYV Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 449 VQEQVNAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLL 508
Query: 274 GDM 276
+M
Sbjct: 509 IEM 511
Score = 136 (52.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + VE +Q+Q L DYV Y +Q +FG+LLL LP +RA+ E L
Sbjct: 434 SLDVKNLENFHLVESVQEQVNAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYL 493
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 494 YYKHLNGDVPCNNLLIEM 511
>UNIPROTKB|F1PXN4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:NTFGLMC EMBL:AAEX03005037 Ensembl:ENSCAFT00000017785
Uniprot:F1PXN4
Length = 519
Score = 238 (88.8 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 61/183 (33%), Positives = 95/183 (51%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQWSIPW-DLSL-LINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + + S+ L+ ++
Sbjct: 331 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVD 390
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 391 YSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEG 450
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 451 VQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLL 510
Query: 274 GDM 276
+M
Sbjct: 511 IEM 513
Score = 137 (53.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 436 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 495
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 496 YYKHLNGDVPYNNLLIEM 513
>UNIPROTKB|O00482 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0009790 "embryo
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0042592
"homeostatic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045070 "positive regulation of viral
genome replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0008206 GO:GO:0005543 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
EMBL:CH471067 GO:GO:0042632 GO:GO:0003705 GO:GO:0042127
GO:GO:0009790 GO:GO:0044212 GO:GO:0006367 GO:GO:0042592
GO:GO:0045070 PDB:3TX7 PDBsum:3TX7 eggNOG:NOG240365 PDB:1YOK
PDB:1ZDU PDB:3PLZ PDB:4DOS PDBsum:1YOK PDBsum:1ZDU PDBsum:3PLZ
PDBsum:4DOS InterPro:IPR016355 PIRSF:PIRSF002530 PDB:1YUC PDB:4DOR
PDBsum:1YUC PDBsum:4DOR CTD:2494 HOGENOM:HOG000063718
HOVERGEN:HBG106677 KO:K08027 OrthoDB:EOG470TH1 EMBL:U80251
EMBL:AF146343 EMBL:AF124247 EMBL:AF190464 EMBL:BC118571
EMBL:BC118652 EMBL:U93553 IPI:IPI00011769 IPI:IPI00217284
IPI:IPI00217285 RefSeq:NP_003813.1 RefSeq:NP_995582.1
UniGene:Hs.33446 PDB:2A66 PDBsum:2A66 ProteinModelPortal:O00482
SMR:O00482 DIP:DIP-37952N IntAct:O00482 MINT:MINT-2997724
STRING:O00482 PhosphoSite:O00482 PRIDE:O00482
Ensembl:ENST00000236914 Ensembl:ENST00000367362 GeneID:2494
KEGG:hsa:2494 UCSC:uc001gvb.3 GeneCards:GC01P199996 HGNC:HGNC:7984
HPA:HPA005455 HPA:HPA017067 MIM:604453 neXtProt:NX_O00482
PharmGKB:PA31765 InParanoid:O00482 OMA:NTFGLMC PhylomeDB:O00482
BindingDB:O00482 ChEMBL:CHEMBL3544 EvolutionaryTrace:O00482
GenomeRNAi:2494 NextBio:9851 ArrayExpress:O00482 Bgee:O00482
CleanEx:HS_NR5A2 Genevestigator:O00482 GermOnline:ENSG00000116833
Uniprot:O00482
Length = 541
Score = 238 (88.8 bits), Expect = 9.6e-18, P = 9.6e-18
Identities = 61/183 (33%), Positives = 95/183 (51%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQWSIPW-DLSL-LINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + + S+ L+ ++
Sbjct: 353 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVD 412
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 413 YSIIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEG 472
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 473 VQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLL 532
Query: 274 GDM 276
+M
Sbjct: 533 IEM 535
Score = 137 (53.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 458 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 517
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 518 YYKHLNGDVPYNNLLIEM 535
>UNIPROTKB|E2R9S0 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:AAEX03013956
RefSeq:XP_852731.1 ProteinModelPortal:E2R9S0
Ensembl:ENSCAFT00000014977 GeneID:485884 KEGG:cfa:485884
NextBio:20859787 Uniprot:E2R9S0
Length = 474
Score = 235 (87.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 61/205 (29%), Positives = 104/205 (50%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I A+ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 180 KIASIADVCESMKEQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMV 238
Query: 143 WDLSLLINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
+ LL+ + R P+ ++ ++++ E++ F++L D +E C+KA+I F P+
Sbjct: 239 FKDVLLLGNDYIVPRHCPELAEMSRVSMRILDELVLPFQELQIDDNEYACLKAIIFFDPD 298
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 299 AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFI 358
Query: 262 ETIGDIPIQRLLGDMYTMEKSYETP 286
+ G I LL +M S + P
Sbjct: 359 KLFGMAKIDNLLQEMLLGGSSSDAP 383
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 298 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 357
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 358 IKLFGMAKIDNLLQEM 373
>ZFIN|ZDB-GENE-030131-1077 [details] [associations]
symbol:hnf4a "hepatocyte nuclear factor 4, alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-1077 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20393 EMBL:CR318614 EMBL:BC056550 IPI:IPI00496171
UniGene:Dr.77049 SMR:Q6PHH5 STRING:Q6PHH5
Ensembl:ENSDART00000028236 Ensembl:ENSDART00000145426
InParanoid:Q6PHH5 Uniprot:Q6PHH5
Length = 463
Score = 233 (87.1 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 62/198 (31%), Positives = 101/198 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLSLLI 149
C+ +LL + V W + + F L DQ+ LL+ E LL A+ S+ + D+ LL
Sbjct: 188 CESMKQQLLVL-VEWAKYIPAFCDLPLDDQVALLRAHAGEHLLLGAAKRSMMYKDILLLG 246
Query: 150 NCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
N P +V RV ++++ E++ F+ L D +E C+KA++ F P+ GL D
Sbjct: 247 NDHIIPRNCPELEVSRV--AVRILDELVLPFQDLQIDDNEYACLKAIVFFDPDAKGLSDP 304
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIP 268
++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F + G
Sbjct: 305 SKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMAK 364
Query: 269 IQRLLGDMYTMEKSYETP 286
I LL +M + E P
Sbjct: 365 IDNLLQEMLLGGSANEAP 382
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 26/76 (34%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 297 DAKGLSDPSKIKRMRYQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 356
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 357 VKLFGMAKIDNLLQEM 372
>UNIPROTKB|E9PSV4 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
IPI:IPI01007598 Ensembl:ENSRNOT00000067429 ArrayExpress:E9PSV4
Uniprot:E9PSV4
Length = 351
Score = 228 (85.3 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 58/187 (31%), Positives = 97/187 (51%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ +LL + V W + + F L DQ+ LL+ E LL + S+ + LL+
Sbjct: 163 CESMKEQLLVL-VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLG 221
Query: 151 CEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
+ R P+ ++ I+++ E++ F++L D +E C+KA+I F P+ GL D
Sbjct: 222 NDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPG 281
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F + G I
Sbjct: 282 KIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKI 341
Query: 270 QRLLGDM 276
LL +M
Sbjct: 342 DNLLQEM 348
Score = 117 (46.2 bits), Expect = 0.00033, P = 0.00033
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 273 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 332
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 333 IKLFGMAKIDNLLQEM 348
>UNIPROTKB|F1MCM4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0042632
GO:GO:0042127 GO:GO:0044212 GO:GO:0045070
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 KO:K08027 OMA:NTFGLMC EMBL:DAAA02043946 EMBL:DAAA02043947
EMBL:DAAA02043948 EMBL:DAAA02043949 EMBL:DAAA02043950
EMBL:DAAA02043951 IPI:IPI01004030 RefSeq:NP_001193745.1
UniGene:Bt.107646 UniGene:Bt.10845 UniGene:Bt.97978
Ensembl:ENSBTAT00000012207 GeneID:541305 KEGG:bta:541305
NextBio:20879130 ArrayExpress:F1MCM4 Uniprot:F1MCM4
Length = 541
Score = 234 (87.4 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 61/183 (33%), Positives = 95/183 (51%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQWSIPW-DLSL-LINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + + S+ L+ ++
Sbjct: 353 LFSIVEWARSSVFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVD 412
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 413 YSVIASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEG 472
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L++K GD+P LL
Sbjct: 473 VQEQVNAALLDYTVCNYPQQTEKFGQLLLRLPEIRALSMQAEEYLYYKHLNGDVPYNNLL 532
Query: 274 GDM 276
+M
Sbjct: 533 IEM 535
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 458 SLDVKNLENFQLVEGVQEQVNAALLDYTVCNYPQQTEKFGQLLLRLPEIRALSMQAEEYL 517
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 518 YYKHLNGDVPYNNLLIEM 535
>UNIPROTKB|O42101 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 InterPro:IPR016355 PIRSF:PIRSF002530 EMBL:AB002403
IPI:IPI00679374 RefSeq:NP_990409.1 UniGene:Gga.572
ProteinModelPortal:O42101 SMR:O42101 STRING:O42101 GeneID:395961
KEGG:gga:395961 CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677
InParanoid:O42101 KO:K08027 OrthoDB:EOG470TH1 NextBio:20816026
Uniprot:O42101
Length = 501
Score = 233 (87.1 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 61/183 (33%), Positives = 92/183 (50%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLAQW--SIPWDLSLLINCEKAR 155
LF V W R F+ L DQ+ LLQ W EL +L H+ + + LL+ ++
Sbjct: 313 LFSIVEWARSSIFFRELKVDDQMKLLQNCWSELLILDHIYRQVVHVKEGSILLVTGQQVD 372
Query: 156 ERLPPDDV--RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ +NN + QE++A+ R L D E C+K ++LF+ + L + Q VE
Sbjct: 373 YSVIASQAGATLNNLMSHAQELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEG 432
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
+Q+Q L DY Y +Q +FG+LLL LP +RA+ E L+ K GD+P LL
Sbjct: 433 VQEQVNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYLYCKHLNGDVPCNNLL 492
Query: 274 GDM 276
+M
Sbjct: 493 IEM 495
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 418 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYL 477
Query: 342 FFKETIGDIPIQRLLGDM 359
+ K GD+P LL +M
Sbjct: 478 YCKHLNGDVPCNNLLIEM 495
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 229 (85.7 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 64/203 (31%), Positives = 104/203 (51%)
Query: 88 AEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLS 146
++ C+ +LL + V W + + F L DQ+ LL+ E LL +A+ S+ + DL
Sbjct: 187 SDVCESMKQQLLVL-VEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVAKRSMSYKDLL 245
Query: 147 LLIN-CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
LL N C R P+ RV+N + + E++ F+ + D +E +KA++ F P+ L
Sbjct: 246 LLGNGCVIHRNCPEPEIGRVSNRV--LDELVLPFQDIQIDDNEYAALKAIVFFDPDAKSL 303
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE+L F + G
Sbjct: 304 RDPSKIKAMRYQVQMSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQLQFIKLFG 363
Query: 266 DIPIQRLLGDMYTMEKSYETPGL 288
I LL +M + E P L
Sbjct: 364 LAKIDNLLQEMLLGGLTTEQPHL 386
>MGI|MGI:109128 [details] [associations]
symbol:Hnf4a "hepatic nuclear factor 4, alpha" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006591 "ornithine metabolic process"
evidence=ISO] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0006637 "acyl-CoA metabolic process" evidence=ISO] [GO:0006805
"xenobiotic metabolic process" evidence=ISO] [GO:0007164
"establishment of tissue polarity" evidence=ISO] [GO:0007548 "sex
differentiation" evidence=IMP] [GO:0007596 "blood coagulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO;IMP] [GO:0010470 "regulation of gastrulation"
evidence=IMP] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0032534 "regulation
of microvillus assembly" evidence=ISO] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045216 "cell-cell
junction organization" evidence=ISO] [GO:0045722 "positive
regulation of gluconeogenesis" evidence=ISO] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=ISO] [GO:0055091 "phospholipid homeostasis" evidence=IMP]
[GO:0060395 "SMAD protein signal transduction" evidence=IDA]
[GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:109128 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0006629 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0044212 Reactome:REACT_127416 GO:GO:0000062 GO:GO:0006637
GO:GO:0016290 GO:GO:2000189 GO:GO:0005504 GO:GO:0070328
GO:GO:0006805 GO:GO:0006591 GO:GO:0043433 GO:GO:0030522
GO:GO:0031018 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 HOVERGEN:HBG005606 EMBL:AL591488 GO:GO:0010470
GO:GO:0033159 CTD:3172 eggNOG:NOG241134 KO:K07292 GO:GO:0007164
GO:GO:0032534 EMBL:D29015 EMBL:AY902317 EMBL:AK143948 EMBL:BC039220
EMBL:EF193393 IPI:IPI00230333 IPI:IPI00321964 PIR:S52074
RefSeq:NP_032287.2 UniGene:Mm.202383 ProteinModelPortal:P49698
SMR:P49698 IntAct:P49698 STRING:P49698 PhosphoSite:P49698
PaxDb:P49698 PRIDE:P49698 Ensembl:ENSMUST00000018094
Ensembl:ENSMUST00000109411 GeneID:15378 KEGG:mmu:15378
UCSC:uc008nta.2 UCSC:uc008ntb.1 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 InParanoid:P49698 OMA:PAFCDLP ChiTaRS:HNF4A
NextBio:288038 Bgee:P49698 CleanEx:MM_HNF4A Genevestigator:P49698
GermOnline:ENSMUSG00000017950 Uniprot:P49698
Length = 474
Score = 229 (85.7 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 59/197 (29%), Positives = 100/197 (50%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ +LL + V W + + F L DQ+ LL+ E LL + S+ + LL+
Sbjct: 188 CESMKEQLLVL-VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLG 246
Query: 151 CEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
+ R P+ ++ I+++ E++ F++L D +E C+KA+I F P+ GL D
Sbjct: 247 NDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPG 306
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F + G I
Sbjct: 307 KIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKI 366
Query: 270 QRLLGDMYTMEKSYETP 286
LL +M + + P
Sbjct: 367 DNLLQEMLLGGSASDAP 383
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 298 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 357
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 358 IKLFGMAKIDNLLQEM 373
>RGD|2810 [details] [associations]
symbol:Hnf4a "hepatocyte nuclear factor 4, alpha" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO;IPI] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006591 "ornithine
metabolic process" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=ISO] [GO:0006637 "acyl-CoA metabolic process"
evidence=IDA] [GO:0006805 "xenobiotic metabolic process"
evidence=ISO] [GO:0007164 "establishment of tissue polarity"
evidence=IDA] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IDA] [GO:0009749 "response to glucose
stimulus" evidence=ISO;IDA] [GO:0010470 "regulation of gastrulation"
evidence=ISO] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in regulation
of gene expression" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0032534 "regulation of microvillus assembly"
evidence=IMP] [GO:0033159 "negative regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045216 "cell-cell junction organization"
evidence=IDA] [GO:0045722 "positive regulation of gluconeogenesis"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IEP] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055091 "phospholipid homeostasis" evidence=ISO] [GO:0060395
"SMAD protein signal transduction" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2810
GO:GO:0005737 GO:GO:0008285 GO:GO:0042803 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629 GO:GO:0045722
GO:GO:0042593 GO:GO:0055091 GO:GO:0050796 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0000062 GO:GO:0006637 GO:GO:0016290
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524 GO:GO:0045216
HOVERGEN:HBG005606 GO:GO:0010470 GO:GO:0033159 CTD:3172
eggNOG:NOG241134 KO:K07292 GO:GO:0007164 GO:GO:0032534
HOGENOM:HOG000260822 EMBL:D10554 EMBL:X57133 EMBL:EF193392
IPI:IPI00207142 IPI:IPI00231412 PIR:A36471 PIR:S23502
RefSeq:NP_071516.2 UniGene:Rn.12238 PDB:1M7W PDBsum:1M7W
ProteinModelPortal:P22449 SMR:P22449 IntAct:P22449 STRING:P22449
PhosphoSite:P22449 GeneID:25735 KEGG:rno:25735 InParanoid:P22449
EvolutionaryTrace:P22449 NextBio:607871 ArrayExpress:P22449
Genevestigator:P22449 GermOnline:ENSRNOG00000008895 Uniprot:P22449
Length = 474
Score = 229 (85.7 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 59/197 (29%), Positives = 100/197 (50%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ +LL + V W + + F L DQ+ LL+ E LL + S+ + LL+
Sbjct: 188 CESMKEQLLVL-VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLG 246
Query: 151 CEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
+ R P+ ++ I+++ E++ F++L D +E C+KA+I F P+ GL D
Sbjct: 247 NDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPG 306
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F + G I
Sbjct: 307 KIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKI 366
Query: 270 QRLLGDMYTMEKSYETP 286
LL +M + + P
Sbjct: 367 DNLLQEMLLGGSASDAP 383
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 298 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 357
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 358 IKLFGMAKIDNLLQEM 373
>UNIPROTKB|G3V750 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4, alpha, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005504 "fatty acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006591 "ornithine metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0009749 "response to glucose
stimulus" evidence=IEA] [GO:0010470 "regulation of gastrulation"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0055091 "phospholipid homeostasis" evidence=IEA] [GO:0060395
"SMAD protein signal transduction" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:CH474005
CTD:3172 KO:K07292 GeneTree:ENSGT00690000101777 RefSeq:NP_071516.2
UniGene:Rn.12238 GeneID:25735 KEGG:rno:25735
Ensembl:ENSRNOT00000011978 Uniprot:G3V750
Length = 474
Score = 229 (85.7 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 59/197 (29%), Positives = 100/197 (50%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ +LL + V W + + F L DQ+ LL+ E LL + S+ + LL+
Sbjct: 188 CESMKEQLLVL-VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLG 246
Query: 151 CEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
+ R P+ ++ I+++ E++ F++L D +E C+KA+I F P+ GL D
Sbjct: 247 NDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPG 306
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F + G I
Sbjct: 307 KIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKI 366
Query: 270 QRLLGDMYTMEKSYETP 286
LL +M + + P
Sbjct: 367 DNLLQEMLLGGSASDAP 383
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 298 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 357
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 358 IKLFGMAKIDNLLQEM 373
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 63/219 (28%), Positives = 107/219 (48%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I + C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 186 KIASIGDVCESMKQQLLVL-VEWAKYIPAFSELPLDDQVALLRAHAGEHLLLGATKRSMV 244
Query: 143 W-DLSLLINCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N ++ RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 245 YKDILLLGNNYVIHRNSSEVEISRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 302
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 303 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 362
Query: 261 KETIGDIPIQRLLGDMYTMEKSYETPGLVDAQPVEMLQD 299
+ G + I LL +M S +T L + QD
Sbjct: 363 VKLFGMVKIDNLLQEMLLGGASNDTSHLHHPMHPHLSQD 401
Score = 116 (45.9 bits), Expect = 0.00068, P = 0.00068
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 303 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 362
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 363 VKLFGMVKIDNLLQEM 378
>UNIPROTKB|H7C3L1 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0003677 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC090954
EMBL:AC090937 HGNC:HGNC:7972 ChiTaRS:NR2C2
ProteinModelPortal:H7C3L1 Ensembl:ENST00000439011 Bgee:H7C3L1
Uniprot:H7C3L1
Length = 222
Score = 205 (77.2 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 51/152 (33%), Positives = 81/152 (53%)
Query: 93 ETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ----WSIPWDLSLL 148
E+ +RLLF+++ W R + FQ L + L++ W ELF L LAQ S+ L+ +
Sbjct: 2 ESASRLLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAI 61
Query: 149 IN-CEKA--RERLPPDDVR-VNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPG 204
+N + + ++L D ++ V I +QE +L DG E +KA++LF+P+ PG
Sbjct: 62 VNHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPG 121
Query: 205 LVDAQPVEMLQDQAQCILGDYVRGRYSRQPTR 236
L +E Q++AQ L DYV+ YS R
Sbjct: 122 LTSTSQIEKFQEKAQMELQDYVQKTYSEDTYR 153
>RGD|1310102 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1310102 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 IPI:IPI00869702
Ensembl:ENSRNOT00000011890 Uniprot:F1M342
Length = 364
Score = 220 (82.5 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 59/196 (30%), Positives = 101/196 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I ++ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 88 KIASISDVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMM 146
Query: 143 W-DLSLLINCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N +V RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 147 YKDILLLGNHYVIHRNSCEVEVSRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 204
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 205 DAKGLSDPGKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 264
Query: 261 KETIGDIPIQRLLGDM 276
+ G + I LL +M
Sbjct: 265 VKLFGMVKIDNLLQEM 280
Score = 116 (45.9 bits), Expect = 0.00046, P = 0.00046
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 205 DAKGLSDPGKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 264
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 265 VKLFGMVKIDNLLQEM 280
>UNIPROTKB|P41235 [details] [associations]
symbol:HNF4A "Hepatocyte nuclear factor 4-alpha"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
[GO:0060398 "regulation of growth hormone receptor signaling
pathway" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0030308 "negative regulation of cell growth" evidence=IMP]
[GO:0007596 "blood coagulation" evidence=IDA] [GO:0005102 "receptor
binding" evidence=IDA] [GO:0005504 "fatty acid binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IDA] [GO:0006591 "ornithine metabolic process"
evidence=IMP] [GO:0006805 "xenobiotic metabolic process"
evidence=IMP] [GO:0055088 "lipid homeostasis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISS] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=ISS] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0009749 "response to glucose
stimulus" evidence=ISS] [GO:0050796 "regulation of insulin
secretion" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0055091 "phospholipid
homeostasis" evidence=ISS] [GO:0070328 "triglyceride homeostasis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 EMBL:CH471077 Reactome:REACT_111045
GO:GO:0008285 GO:GO:0042803 GO:GO:0005654 GO:GO:0030154
GO:GO:0030308 GO:GO:0042493 GO:GO:0046872 GO:GO:0007596
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0005102 GO:GO:0006629
GO:GO:0019216 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
Orphanet:552 Pathway_Interaction_DB:hnf3bpathway GO:GO:0050796
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0000062 GO:GO:0006637 GO:GO:0016290 GO:GO:2000189
GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0031018
GO:GO:0051591 GO:GO:0007548 GO:GO:0006367 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 MIM:606391 HOVERGEN:HBG005606 GO:GO:0010470
GO:GO:0033159 GO:GO:0033613 EMBL:X87870 EMBL:X87871 EMBL:X87872
EMBL:Z49825 EMBL:AY680696 EMBL:AY680697 EMBL:AY680698 EMBL:U72969
EMBL:U72959 EMBL:U72961 EMBL:U72962 EMBL:U72963 EMBL:U72964
EMBL:U72965 EMBL:U72966 EMBL:U72967 EMBL:U72968 EMBL:EF591040
EMBL:AL132772 EMBL:BC137539 EMBL:BC137540 EMBL:X76930
IPI:IPI00013196 IPI:IPI00216080 IPI:IPI00300558 IPI:IPI00412368
IPI:IPI00641248 IPI:IPI00645235 IPI:IPI00847265 PIR:JC4937
PIR:JC4938 PIR:JC6096 RefSeq:NP_000448.3 RefSeq:NP_001025174.1
RefSeq:NP_001025175.1 RefSeq:NP_001245284.1 RefSeq:NP_787110.2
RefSeq:NP_849181.1 UniGene:Hs.116462 PDB:1PZL PDB:3CBB PDB:3FS1
PDBsum:1PZL PDBsum:3CBB PDBsum:3FS1 ProteinModelPortal:P41235
SMR:P41235 DIP:DIP-499N IntAct:P41235 MINT:MINT-269829
STRING:P41235 PhosphoSite:P41235 DMDM:148886624 PaxDb:P41235
PRIDE:P41235 Ensembl:ENST00000316099 Ensembl:ENST00000316673
Ensembl:ENST00000415691 Ensembl:ENST00000443598
Ensembl:ENST00000457232 GeneID:3172 KEGG:hsa:3172 UCSC:uc002xlt.3
UCSC:uc002xlu.3 UCSC:uc002xly.3 UCSC:uc002xma.3 CTD:3172
GeneCards:GC20P042984 HGNC:HGNC:5024 HPA:CAB019417 HPA:HPA004712
MIM:125850 MIM:600281 neXtProt:NX_P41235 Orphanet:263455
PharmGKB:PA29349 eggNOG:NOG241134 KO:K07292 BindingDB:P41235
ChEMBL:CHEMBL5398 EvolutionaryTrace:P41235 GenomeRNAi:3172
NextBio:12578 ArrayExpress:P41235 Bgee:P41235 Genevestigator:P41235
GermOnline:ENSG00000101076 GO:GO:0007164 GO:GO:0060398
GO:GO:0032534 Uniprot:P41235
Length = 474
Score = 223 (83.6 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 59/195 (30%), Positives = 100/195 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I A+ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 180 KIASIADVCESMKEQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMV 238
Query: 143 WDLSLLINCEKARERLPPDDVRVNN-EIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
+ LL+ + R P+ ++ I+++ E++ F++L D +E +KA+I F P+
Sbjct: 239 FKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPD 298
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 299 AKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFI 358
Query: 262 ETIGDIPIQRLLGDM 276
+ G I LL +M
Sbjct: 359 KLFGMAKIDNLLQEM 373
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ L+ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 298 DAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 357
Query: 344 KETIGDIPIQRLLGDM 359
+ G I LL +M
Sbjct: 358 IKLFGMAKIDNLLQEM 373
>MGI|MGI:1353604 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_13641
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1353604 GO:GO:0005829 GO:GO:0045893
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018
HOVERGEN:HBG005606 eggNOG:NOG241134 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 CTD:3174 KO:K08037 OrthoDB:EOG4G4GQH
EMBL:AJ242626 IPI:IPI00322956 RefSeq:NP_038948.1 UniGene:Mm.330897
ProteinModelPortal:Q9WUU6 SMR:Q9WUU6 STRING:Q9WUU6
PhosphoSite:Q9WUU6 PRIDE:Q9WUU6 Ensembl:ENSMUST00000108393
GeneID:30942 KEGG:mmu:30942 InParanoid:Q9WUU6 NextBio:307386
Bgee:Q9WUU6 CleanEx:MM_HNF4G Genevestigator:Q9WUU6
GermOnline:ENSMUSG00000017688 Uniprot:Q9WUU6
Length = 408
Score = 220 (82.5 bits), Expect = 6.7e-16, P = 6.7e-16
Identities = 59/196 (30%), Positives = 101/196 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I ++ C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 132 KIASISDVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMM 190
Query: 143 W-DLSLLINCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N +V RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 191 YKDILLLGNHYVIHRNSCEVEVSRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 248
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 261 KETIGDIPIQRLLGDM 276
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
>UNIPROTKB|F1N2D7 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:DAAA02038880
IPI:IPI00904047 Ensembl:ENSBTAT00000052638 ArrayExpress:F1N2D7
Uniprot:F1N2D7
Length = 408
Score = 219 (82.2 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 59/196 (30%), Positives = 100/196 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I + C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 132 KIASIGDVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMM 190
Query: 143 W-DLSLLINCEKA-RERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N R + RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 191 YKDILLLGNNYVIHRNSCEVEISRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 248
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 261 KETIGDIPIQRLLGDM 276
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
>UNIPROTKB|I3LCV8 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008206 GO:GO:0005543 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
GO:GO:0045070 GeneTree:ENSGT00670000097927 EMBL:FP236742
Ensembl:ENSSSCT00000026077 OMA:DINEYSC Uniprot:I3LCV8
Length = 167
Score = 201 (75.8 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 52/159 (32%), Positives = 84/159 (52%)
Query: 123 LLQESWKELFLL-HLAQWSIPW-DLSL-LINCEKARERLPPDDV--RVNNEIKLIQEILA 177
LLQ W EL +L H+ + + + S+ L+ ++ + +NN + QE++A
Sbjct: 3 LLQNCWSELLILDHIYRQVVHGKEGSIFLVTGQQVDYSIIASQAGTTLNNLMSHAQELVA 62
Query: 178 RFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRF 237
+ R L D E C+K ++LF+ + L + Q VE +Q+Q L DY Y +Q +F
Sbjct: 63 KLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKF 122
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
G+LLL LP +RA+ E L++K GD+P LL +M
Sbjct: 123 GQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEM 161
Score = 137 (53.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + Q VE +Q+Q L DY Y +Q +FG+LLL LP +RA+ E L
Sbjct: 84 SLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYL 143
Query: 342 FFKETIGDIPIQRLLGDM 359
++K GD+P LL +M
Sbjct: 144 YYKHLNGDVPYNNLLIEM 161
>UNIPROTKB|F1MGG2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:DAAA02038880 IPI:IPI00694519 UniGene:Bt.16536
Ensembl:ENSBTAT00000010892 ArrayExpress:F1MGG2 Uniprot:F1MGG2
Length = 425
Score = 219 (82.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 59/196 (30%), Positives = 100/196 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I + C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 149 KIASIGDVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMM 207
Query: 143 W-DLSLLINCEKA-RERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N R + RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 208 YKDILLLGNNYVIHRNSCEVEISRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 265
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 266 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 325
Query: 261 KETIGDIPIQRLLGDM 276
+ G + I LL +M
Sbjct: 326 VKLFGMVKIDNLLQEM 341
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 266 DAKGLSDPVKIKNMRFQVQLSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 325
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 326 VKLFGMVKIDNLLQEM 341
>UNIPROTKB|Q14541 [details] [associations]
symbol:HNF4G "Hepatocyte nuclear factor 4-gamma"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0030522
GO:GO:0031018 GO:GO:0006367 HOVERGEN:HBG005606 eggNOG:NOG241134
HOGENOM:HOG000260822 EMBL:Z49826 EMBL:BX571750 EMBL:AF133504
EMBL:AF133496 EMBL:AF133497 EMBL:AF133498 EMBL:AF133499
EMBL:AF133500 EMBL:AF133501 EMBL:AF133502 EMBL:AF133503
EMBL:AF207953 EMBL:BC105009 EMBL:BC105011 IPI:IPI00291564
IPI:IPI00852837 PIR:JC6095 RefSeq:NP_004124.4 UniGene:Hs.241529
PDB:1LV2 PDBsum:1LV2 ProteinModelPortal:Q14541 SMR:Q14541
STRING:Q14541 PhosphoSite:Q14541 DMDM:160110004 PaxDb:Q14541
PRIDE:Q14541 DNASU:3174 Ensembl:ENST00000354370
Ensembl:ENST00000396423 GeneID:3174 KEGG:hsa:3174 UCSC:uc003yaq.3
CTD:3174 GeneCards:GC08P076370 H-InvDB:HIX0007597 HGNC:HGNC:5026
HPA:HPA005438 MIM:605966 neXtProt:NX_Q14541 PharmGKB:PA29351
InParanoid:Q14541 KO:K08037 OMA:ANYSEVL OrthoDB:EOG4G4GQH
ChEMBL:CHEMBL1961786 ChiTaRS:HNF4G EvolutionaryTrace:Q14541
GenomeRNAi:3174 NextBio:12594 ArrayExpress:Q14541 Bgee:Q14541
CleanEx:HS_HNF4G Genevestigator:Q14541 GermOnline:ENSG00000164749
Uniprot:Q14541
Length = 408
Score = 217 (81.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 59/196 (30%), Positives = 100/196 (51%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
+I + C+ +LL + V W + + F L DQ+ LL+ E LL + S+
Sbjct: 132 KIASIGDVCESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMM 190
Query: 143 W-DLSLLINCEKA-RERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
+ D+ LL N R + RV N + + E++ F+++ D +E C+KA++ F P
Sbjct: 191 YKDILLLGNNYVIHRNSCEVEISRVANRV--LDELVRPFQEIQIDDNEYACLKAIVFFDP 248
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 261 KETIGDIPIQRLLGDM 276
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
Score = 114 (45.2 bits), Expect = 0.00094, P = 0.00093
Identities = 26/76 (34%), Positives = 42/76 (55%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL D ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ F
Sbjct: 249 DAKGLSDPVKIKNMRFQVQIGLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQF 308
Query: 344 KETIGDIPIQRLLGDM 359
+ G + I LL +M
Sbjct: 309 VKLFGMVKIDNLLQEM 324
>ZFIN|ZDB-GENE-040702-6 [details] [associations]
symbol:nr5a1b "nuclear receptor subfamily 5, group A,
member 1b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040702-6 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 EMBL:AL772368
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:FP016184 EMBL:FP085418 EMBL:BC162252
EMBL:BC162260 EMBL:AY212920 IPI:IPI00497101 RefSeq:NP_997999.1
UniGene:Dr.30454 HSSP:P45448 SMR:Q800U8 Ensembl:ENSDART00000028265
GeneID:405759 KEGG:dre:405759 CTD:405759 InParanoid:Q800U8
OMA:YCITANS OrthoDB:EOG4P2Q2C NextBio:20817729 Uniprot:Q800U8
Length = 502
Score = 219 (82.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 60/184 (32%), Positives = 90/184 (48%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW---DLSLLINCEKAR 155
LF V W R F+ L DQ+ LL W EL +L + D LLI ++
Sbjct: 312 LFSIVEWARSCIFFKELKVGDQMKLLHNCWSELLVLDYVARQLHHGKEDSVLLITGQEVE 371
Query: 156 --ERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP-VE 212
L V ++ I+ QE++ R ++L D E C+K +ILF P+ L++ QP VE
Sbjct: 372 LASLLAQAGVTLSGMIQRGQELVQRLQELQLDRRETACLKYLILFNPDVK-LLENQPYVE 430
Query: 213 MLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
+ +Q L +Y Y + P RF ++LL LP LRA+ + L +K G++P L
Sbjct: 431 SVYEQVNAALLEYTLCAYPQFPDRFSQILLRLPELRALSSQAEDYLCYKHLSGEVPCNNL 490
Query: 273 LGDM 276
L +M
Sbjct: 491 LIEM 494
>UNIPROTKB|Q15466 [details] [associations]
symbol:NR0B2 "Nuclear receptor subfamily 0 group B member
2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009749 "response to glucose stimulus"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032024 "positive regulation of insulin secretion"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042975 "peroxisome proliferator activated receptor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046966
"thyroid hormone receptor binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0030521 "androgen receptor signaling pathway" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005737 GO:GO:0003714 GO:GO:0043234 GO:GO:0005654
GO:GO:0003677 GO:GO:0031100 GO:GO:0009749 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0008203 GO:GO:0032024
GO:GO:0003700 GO:GO:0000122 GO:GO:0043433 MIM:601665 PDB:2Z4J
PDBsum:2Z4J GO:GO:0006367 EMBL:AL356390 HOGENOM:HOG000231151
EMBL:L76571 EMBL:AB058644 EMBL:BC030207 IPI:IPI00017483
RefSeq:NP_068804.1 UniGene:Hs.427055 PDB:1YUC PDB:2Q3Y PDB:4DOR
PDBsum:1YUC PDBsum:2Q3Y PDBsum:4DOR ProteinModelPortal:Q15466
SMR:Q15466 DIP:DIP-46313N IntAct:Q15466 STRING:Q15466
PhosphoSite:Q15466 DMDM:9978744 PRIDE:Q15466 DNASU:8431
Ensembl:ENST00000254227 GeneID:8431 KEGG:hsa:8431 UCSC:uc001bnf.3
CTD:8431 GeneCards:GC01M027237 HGNC:HGNC:7961 MIM:604630
neXtProt:NX_Q15466 PharmGKB:PA31747 eggNOG:NOG235713
HOVERGEN:HBG008136 InParanoid:Q15466 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J PhylomeDB:Q15466 ChEMBL:CHEMBL5603
EvolutionaryTrace:Q15466 GenomeRNAi:8431 NextBio:31546
ArrayExpress:Q15466 Bgee:Q15466 CleanEx:HS_NR0B2
Genevestigator:Q15466 GermOnline:ENSG00000131910 Uniprot:Q15466
Length = 257
Score = 195 (73.7 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 65/208 (31%), Positives = 98/208 (47%)
Query: 82 LQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI 141
+Q+ C+E +L V ++R L F L +DQ LLQ W LFLL LAQ ++
Sbjct: 47 VQLCAPHRTCREALD-VLAKTVAFLRNLPSFWQLPPQDQRRLLQGCWGPLFLLGLAQDAV 105
Query: 142 PWDL------SLL--INCEKARE-----RLPPDDVRVNNEIKLIQEILARFRQLSPDGSE 188
+++ S+L I E+ +LP ++ +Q L F L E
Sbjct: 106 TFEVAEAPVPSILKKILLEEPSSSGGSGQLPDRPQPSLAAVQWLQCCLESFWSLELSPKE 165
Query: 189 CGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLR 248
C+K ILF P+ PGL A + LQ +A +L + + R R+LL +L+
Sbjct: 166 YACLKGTILFNPDVPGLQAASHIGHLQQEAHWVLCEVLEPWCPAAQGRLTRVLLTASTLK 225
Query: 249 AVRQSTIERLFFKETIGDIPIQRLLGDM 276
++ S + LFF+ IGD+ I LLGDM
Sbjct: 226 SIPTSLLGDLFFRPIIGDVDIAGLLGDM 253
>ZFIN|ZDB-GENE-030131-4652 [details] [associations]
symbol:nr5a5 "nuclear receptor subfamily 5, group
A, member 5" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-4652 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HSSP:P03372 InterPro:IPR016355 PIRSF:PIRSF002530 HOVERGEN:HBG106677
EMBL:AF327373 IPI:IPI00508517 RefSeq:NP_999944.1 UniGene:Dr.11921
ProteinModelPortal:Q98ST8 SMR:Q98ST8 GeneID:407626 KEGG:dre:407626
CTD:407626 InParanoid:Q98ST8 NextBio:20818501 ArrayExpress:Q98ST8
Uniprot:Q98ST8
Length = 537
Score = 215 (80.7 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 57/183 (31%), Positives = 93/183 (50%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLA-QWSIPWDLSL-LINCEK-- 153
LF V W R F+ L DQ++LLQ W EL +L HL Q + D S+ LI ++
Sbjct: 349 LFGLVEWARNCELFKELKVDDQMVLLQSCWSELLVLDHLCRQVAYGRDGSICLITGQQIE 408
Query: 154 ARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
A L V +++ + Q+++ + R L D E C+K ++LF P+ + + + VE
Sbjct: 409 ASTILSQAGVTLSSLVSRAQDLVTKLRSLQLDREEFVCLKYLVLFNPDVKSVQNRRQVEQ 468
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
Q++ L D+ + +FG+LLL LP +R++ E L+ + +GD P LL
Sbjct: 469 TQERVNKALMDHTMQTHPGHSDKFGQLLLRLPEVRSISLQVEEYLYQRHLLGDFPCNSLL 528
Query: 274 GDM 276
+M
Sbjct: 529 TEM 531
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 212 (79.7 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 57/191 (29%), Positives = 99/191 (51%)
Query: 88 AEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLS 146
++ C+ +LL + V W + + F L DQ+ LL+ E LL A+ S+ + D+
Sbjct: 184 SDVCESMKQQLLVL-VEWAKYIPGFCELPLDDQVALLRAHAGEHLLLGAAKRSMAYKDIL 242
Query: 147 LLINCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGL 205
LL N ++ RV N I + E++ F+++ D +E C+KA++ F P+ GL
Sbjct: 243 LLGNNYIIHRNSTEVEISRVANRI--LDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGL 300
Query: 206 VDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIG 265
+ ++ ++ Q Q L DY+ R RFG LLL+LP+L+++ IE++ + G
Sbjct: 301 SNPVKIKNMRYQVQISLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQLVKLFG 360
Query: 266 DIPIQRLLGDM 276
+ I LL +M
Sbjct: 361 IVKIDSLLQEM 371
>UNIPROTKB|Q7SIF6 [details] [associations]
symbol:Q7SIF6 "Gene regulation protein" species:7102
"Heliothis virescens" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR00545
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 PDB:1R1K PDB:1R20 PDB:2R40 PDBsum:1R1K PDBsum:1R20
PDBsum:2R40 PDB:1G2N PDB:3IXP PDBsum:1G2N PDBsum:3IXP
ProteinModelPortal:Q7SIF6 SMR:Q7SIF6 IntAct:Q7SIF6
EvolutionaryTrace:Q7SIF6 Uniprot:Q7SIF6
Length = 264
Score = 162 (62.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 170 KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGR 229
+++ E+ + R L D +E +KA+IL P+ GL + Q VE+L+++ L +Y R
Sbjct: 145 RVLSELSLKMRTLRVDQAEYVALKAIILLNPDVKGLKNRQEVEVLREKMFLCLDEYCRRS 204
Query: 230 YSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
S + RF LLL LP+LR++ + E LFF + D I + D
Sbjct: 205 RSSEEGRFAALLLRLPALRSISLKSFEHLFFFHLVADTSIAGYIRD 250
Score = 112 (44.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ GL + Q VE+L+++ L +Y R S + RF LLL LP+LR++ + E LFF
Sbjct: 176 DVKGLKNRQEVEVLREKMFLCLDEYCRRSRSSEEGRFAALLLRLPALRSISLKSFEHLFF 235
Query: 344 KETIGDIPIQRLLGD 358
+ D I + D
Sbjct: 236 FHLVADTSIAGYIRD 250
Score = 81 (33.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
CQ ++ + V W R + F L DQ+LL++ SW EL L +A W
Sbjct: 48 CQIGNKQIAALVV-WARDIPHFSQLEMEDQILLIKGSWNELLLFAIA-W 94
>ZFIN|ZDB-GENE-080403-1 [details] [associations]
symbol:nr0b2a "nuclear receptor subfamily 0, group B,
member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
ZFIN:ZDB-GENE-080403-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000231151 eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563
OrthoDB:EOG4FXR8J EMBL:BC058069 IPI:IPI00897501
RefSeq:NP_001243120.1 UniGene:Dr.13394 ProteinModelPortal:Q6PEG7
GeneID:403010 KEGG:dre:403010 CTD:403010 InParanoid:Q6PEG7
ArrayExpress:Q6PEG7 Uniprot:Q6PEG7
Length = 265
Score = 194 (73.4 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 60/197 (30%), Positives = 95/197 (48%)
Query: 88 AEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL-- 145
+E C + +L V +++ L FQ L +DQL LLQ W LF+L LAQ + + +
Sbjct: 66 SETCA-LASDVLVKTVYFMKNLPAFQQLPPKDQLKLLQNCWTPLFILGLAQDRVHFQVDE 124
Query: 146 ----SLLINCE-KARERLPPDDVRVNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFT 199
S+L +E D + ++ ++ + +F L E +K ++F
Sbjct: 125 SAAPSMLKRILLSGQESAGADSEQPTLAGVQTLKSCINKFWSLDLSPKEYAYLKGTVIFN 184
Query: 200 PETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLF 259
P+ P L + VE LQ +AQ L + + Y + RF R+LL +L+++ S I LF
Sbjct: 185 PDVPDLKASLFVEGLQYEAQQALKEVLVPLYPQDGGRFARILLTASTLKSITPSLITELF 244
Query: 260 FKETIGDIPIQRLLGDM 276
F+ IGD I LL DM
Sbjct: 245 FRPVIGDAQILDLLADM 261
>UNIPROTKB|E1BS38 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00820290 Ensembl:ENSGALT00000033724 Uniprot:E1BS38
Length = 456
Score = 210 (79.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLSLLI 149
C+ +LL + V W + + F L DQ+ LL+ E LL +A+ SIP+ D LL
Sbjct: 179 CESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSIPYTDFLLLG 237
Query: 150 NCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
N P ++ RV I + E++ R + D +E C+KA+I F P+ GL +
Sbjct: 238 NDFIIPMHCPELEIARVATRI--LDELVKPLRDIQIDDNEYACLKAIIFFDPDCKGLSEP 295
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIP 268
V+ ++ Q Q L DY+ R RF +LL+LP L+++ IE++ F + G
Sbjct: 296 GKVKNMRFQVQVNLEDYINDRQYDSRGRFSDILLLLPPLQSITWQMIEQVQFVKLFGVAR 355
Query: 269 IQRLLGDMY----TMEKSYET--PGL-VDAQPVEMLQDQAQCIL 305
I LL +M T++ Y++ P L +D P +L ++
Sbjct: 356 IDSLLQEMLLGGTTVDVQYQSGPPSLNLDPLPGHVLPGNMSSVI 399
>UNIPROTKB|F1N848 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 OMA:EIEYIAL EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00593954 Ensembl:ENSGALT00000009154
Ensembl:ENSGALT00000039029 Uniprot:F1N848
Length = 459
Score = 210 (79.0 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 67/224 (29%), Positives = 109/224 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLSLLI 149
C+ +LL + V W + + F L DQ+ LL+ E LL +A+ SIP+ D LL
Sbjct: 189 CESMKQQLLVL-VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSIPYTDFLLLG 247
Query: 150 NCEKARERLPPDDV-RVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
N P ++ RV I + E++ R + D +E C+KA+I F P+ GL +
Sbjct: 248 NDFIIPMHCPELEIARVATRI--LDELVKPLRDIQIDDNEYACLKAIIFFDPDCKGLSEP 305
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIP 268
V+ ++ Q Q L DY+ R RF +LL+LP L+++ IE++ F + G
Sbjct: 306 GKVKNMRFQVQVNLEDYINDRQYDSRGRFSDILLLLPPLQSITWQMIEQVQFVKLFGVAR 365
Query: 269 IQRLLGDMY----TMEKSYET--PGL-VDAQPVEMLQDQAQCIL 305
I LL +M T++ Y++ P L +D P +L ++
Sbjct: 366 IDSLLQEMLLGGTTVDVQYQSGPPSLNLDPLPGHVLPGNMSSVI 409
>UNIPROTKB|F1NCW3 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0003677
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0043433 GeneTree:ENSGT00390000015719 CTD:8431
KO:K08563 OMA:HRTCREA EMBL:AADN02051291 IPI:IPI00585270
RefSeq:NP_001026064.2 UniGene:Gga.7790 ProteinModelPortal:F1NCW3
Ensembl:ENSGALT00000001301 GeneID:768353 KEGG:gga:768353
NextBio:20918610 Uniprot:F1NCW3
Length = 262
Score = 191 (72.3 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 58/195 (29%), Positives = 98/195 (50%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL----- 145
CQ + +L + +++ L F L + DQLLLL W LFLL L Q + +++
Sbjct: 52 CQ-AASDVLVKTISFMKNLPSFHLLPRGDQLLLLDSCWVPLFLLGLVQEMVTFEVMETPA 110
Query: 146 -SLL--INCEKARERLPPDDVR-VNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPE 201
S+L I + +R P+ + + ++ +Q L F L E +K ILF P+
Sbjct: 111 PSMLEKILLDGQSKRQEPEWTQPMLAAVQWLQCSLNTFWSLDLSPKEYAYLKGAILFNPD 170
Query: 202 TPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFK 261
PGL + +E LQ +A+ L + V+ + + RF +LL+ +L+++ + I LFF+
Sbjct: 171 VPGLTASLYIESLQREAERALQEVVQILHPKDQDRFALILLITSTLKSIPPALITDLFFR 230
Query: 262 ETIGDIPIQRLLGDM 276
IG+ I L+ DM
Sbjct: 231 PIIGNADIVELIVDM 245
>RGD|621032 [details] [associations]
symbol:Nr0b2 "nuclear receptor subfamily 0, group B, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0009749 "response
to glucose stimulus" evidence=IMP] [GO:0019904 "protein domain
specific binding" evidence=IEA;ISO] [GO:0031100 "organ
regeneration" evidence=IEP] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0042974 "retinoic acid receptor
binding" evidence=IPI] [GO:0042975 "peroxisome proliferator
activated receptor binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046965 "retinoid X
receptor binding" evidence=IPI] [GO:0046966 "thyroid hormone
receptor binding" evidence=IPI] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 RGD:621032 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0043234 GO:GO:0032403 GO:GO:0003677 GO:GO:0031100
GO:GO:0009749 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0043433 HOGENOM:HOG000231151 GeneTree:ENSGT00390000015719
CTD:8431 eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J EMBL:D86839 EMBL:D86580 EMBL:BC088117
IPI:IPI00209708 RefSeq:NP_476474.1 UniGene:Rn.10712 PDB:1YP0
PDB:1ZGY PDB:1ZH7 PDBsum:1YP0 PDBsum:1ZGY PDBsum:1ZH7
ProteinModelPortal:P97947 DIP:DIP-46314N STRING:P97947
PhosphoSite:P97947 Ensembl:ENSRNOT00000009683 GeneID:117274
KEGG:rno:117274 UCSC:RGD:621032 InParanoid:P97947
EvolutionaryTrace:P97947 NextBio:620203 Genevestigator:P97947
GermOnline:ENSRNOG00000007229 Uniprot:P97947
Length = 260
Score = 189 (71.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 63/199 (31%), Positives = 96/199 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL----- 145
C+E +L V ++R L F L DQ LL+ W LFLL LAQ ++ +++
Sbjct: 59 CREALD-VLGKTVAFLRNLPSFCLLPHEDQRRLLEGCWGPLFLLGLAQDTVTFEVAEAPV 117
Query: 146 -SLL--INCEK----ARERLPPDDVRVN-NEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
S+L I E+ A+ PPD + + ++ +Q L F L E +K IL
Sbjct: 118 PSILKKILLEEPNSGAQGAQPPDPPQPSLAAVQWLQHCLESFWSLELGPKEYAYLKGTIL 177
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
F P+ PGL + + LQ +A L + + Y R R+LLM +L+ + + +
Sbjct: 178 FNPDVPGLHASCHIAHLQQEAHWALCEVLEPWYPASQGRLARILLMASTLKNISCTLLVD 237
Query: 258 LFFKETIGDIPIQRLLGDM 276
LFF+ IGD+ I LL DM
Sbjct: 238 LFFRPVIGDVDITELLEDM 256
>ZFIN|ZDB-GENE-010504-1 [details] [associations]
symbol:nr5a1a "nuclear receptor subfamily 5, group A,
member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030325 "adrenal gland development" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;IDA] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-010504-1 GO:GO:0005634 GO:GO:0030325
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0021854 HSSP:P19793
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:AF198086 IPI:IPI00492563 RefSeq:NP_571869.1
UniGene:Dr.53400 ProteinModelPortal:Q9IAI9 SMR:Q9IAI9 STRING:Q9IAI9
GeneID:83916 KEGG:dre:83916 CTD:83916 InParanoid:Q9IAI9
NextBio:20934198 ArrayExpress:Q9IAI9 Uniprot:Q9IAI9
Length = 454
Score = 201 (75.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 59/182 (32%), Positives = 88/182 (48%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HLA-QWSIPWDLSLLINCEKARE 156
LF V W R F+ L DQ+ LL W EL LL H+ Q D SLL+ + E
Sbjct: 264 LFSIVEWARSCVFFKELKVGDQMRLLHNCWSELLLLDHICRQVHHGRDGSLLLITGQEVE 323
Query: 157 RLPPDDVR--VNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEML 214
D +++ ++ Q++ R + L D E C+K +ILF P L + Q VE +
Sbjct: 324 LSAVLDAGPPLSSMVERGQDLSRRLQLLQVDSREMACLKFLILFNPNVKLLENPQFVESV 383
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 274
Q+Q L +Y Y + RF +L+L LP LR++ + L +K G++P LL
Sbjct: 384 QEQVNGALLEYTLFSYPQCVERFSQLILRLPELRSLSAEAEDFLCYKHLCGEVPCNNLLI 443
Query: 275 DM 276
+M
Sbjct: 444 EM 445
>UNIPROTKB|F1NRP9 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030238
"male sex determination" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0032448 "DNA hairpin binding"
evidence=IEA] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0035258
"steroid hormone receptor binding" evidence=IEA] [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0060008 "Sertoli cell differentiation"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0003714 GO:GO:0008104 GO:GO:0030154
GO:GO:0006950 GO:GO:0006694 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003723
GO:GO:0042788 GO:GO:0000122 GO:GO:0043433 GO:GO:0033144
GO:GO:0007530 GO:GO:0045596 GO:GO:0032448 InterPro:IPR025900
Pfam:PF14046 GeneTree:ENSGT00390000015719 EMBL:AADN02011161
IPI:IPI00597241 ProteinModelPortal:F1NRP9
Ensembl:ENSGALT00000026260 OMA:PCFRELP Uniprot:F1NRP9
Length = 263
Score = 188 (71.2 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 58/198 (29%), Positives = 98/198 (49%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI--------- 141
C+ +A +L +R+V+ + FQ L +QL+L++ W L +L LAQ +
Sbjct: 62 CKAASA-VLVKTLRFVQNVPCFQELPLDEQLVLVRSCWAPLLVLGLAQERVHLETVESAE 120
Query: 142 PWDLSLLINCEKARERLP-PDDVRVNN--EIKLIQEILARFRQLSPDGSECGCMKAVILF 198
P L ++ + E P P + EI+ I+ LA+ L E +K +LF
Sbjct: 121 PSMLQRILTTRRLGEHAPAPGRQHPPSAGEIQAIKGFLAKCWSLDISTKEYAYLKGTVLF 180
Query: 199 TPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 258
P+ PGL Q +E LQ +AQ L ++VR + RF +L ++L L+++ + I L
Sbjct: 181 NPDLPGLQCTQYIEGLQKEAQEALNEHVRLIHRGDQARFAKLNVVLSLLQSINANVIAEL 240
Query: 259 FFKETIGDIPIQRLLGDM 276
FF+ IG + + +L +M
Sbjct: 241 FFRPIIGSVNMDDMLLEM 258
>ZFIN|ZDB-GENE-030131-2730 [details] [associations]
symbol:hnf4b "hepatic nuclear factor 4, beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030131-2730 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 eggNOG:NOG241134 HSSP:P11473
EMBL:BC065657 IPI:IPI00509611 RefSeq:NP_991109.1 UniGene:Dr.6336
ProteinModelPortal:Q6P0E0 SMR:Q6P0E0 GeneID:324010 KEGG:dre:324010
CTD:324010 NextBio:20808536 Uniprot:Q6P0E0
Length = 465
Score = 199 (75.1 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 55/203 (27%), Positives = 103/203 (50%)
Query: 80 GLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQW 139
G +I + C+ +LL + V W + + F LS D++ LL+ E +L +A+
Sbjct: 177 GSKKIAGVGDVCESMKQQLLLL-VEWAKRIPEFCELSVDDRVALLRAHSAEHLILGVARR 235
Query: 140 SIPWDLSLLINCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFT 199
S+P+ +L+ + + +++++E++ ++L+ +E C+K ++ F
Sbjct: 236 SLPYSDIILLGNDFIIPVGGSEQEMSKVAVRILEELVRPLKELNITDTEFVCLKTIVFFA 295
Query: 200 PETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLF 259
P+ PGL AQ V L+ QAQ +L + S Q RFG LLL+L +L++V +E+L
Sbjct: 296 PDCPGLQCAQAVRRLRFQAQVLLDEAT----SEQRGRFGELLLLLTTLQSVAWQMLEQLQ 351
Query: 260 FKETIGDIPIQRLLGDMYTMEKS 282
+G + LL +M E++
Sbjct: 352 LMRLLGRASVDSLLMEMLLGEEA 374
>UNIPROTKB|F6V776 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:EDRHLGS Ensembl:ENSCAFT00000027147
EMBL:AAEX03005862 EMBL:AAEX03005860 EMBL:AAEX03005861
Uniprot:F6V776
Length = 438
Score = 195 (73.7 bits), Expect = 7.6e-13, P = 7.6e-13
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F LS DQ+ LLQ +W E+ +L
Sbjct: 233 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEILIL 291
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 292 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 347
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 348 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPLLRQT 407
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 408 AAKAVQHFYSVKLQGKVPMHKLFLEM 433
>UNIPROTKB|E2QSQ7 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
Ensembl:ENSCAFT00000027147 Uniprot:E2QSQ7
Length = 441
Score = 195 (73.7 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F LS DQ+ LLQ +W E+ +L
Sbjct: 228 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEILIL 286
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 287 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 342
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 343 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPLLRQT 402
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 403 AAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|E7EWD9 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC008050
EMBL:AC016543 HGNC:HGNC:3473 ChiTaRS:ESRRB IPI:IPI00965112
ProteinModelPortal:E7EWD9 SMR:E7EWD9 Ensembl:ENST00000512784
ArrayExpress:E7EWD9 Bgee:E7EWD9 Uniprot:E7EWD9
Length = 508
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F +LS DQ+ LLQ +W E+ +L
Sbjct: 233 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILIL 291
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 292 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 347
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 348 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPLLRQT 407
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 408 AAKAVQHFYSVKLQGKVPMHKLFLEM 433
>UNIPROTKB|O95718 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0001892
"embryonic placenta development" evidence=NAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0005496 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000980 GO:GO:0003713
GO:GO:0008134 GO:GO:0006367 GO:GO:0019827 Orphanet:90636
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 EMBL:AF094517 EMBL:AY451389 EMBL:AY451390
EMBL:AB307714 EMBL:HQ692852 EMBL:AC008050 EMBL:AC016543
EMBL:BC131517 IPI:IPI00032812 RefSeq:NP_004443.3 UniGene:Hs.435845
PDB:1LO1 PDBsum:1LO1 ProteinModelPortal:O95718 SMR:O95718
STRING:O95718 PhosphoSite:O95718 PaxDb:O95718 PRIDE:O95718
DNASU:2103 Ensembl:ENST00000261532 Ensembl:ENST00000380887
Ensembl:ENST00000505752 Ensembl:ENST00000509242
Ensembl:ENST00000556177 GeneID:2103 KEGG:hsa:2103 CTD:2103
GeneCards:GC14P076837 HGNC:HGNC:3473 MIM:602167 MIM:608565
neXtProt:NX_O95718 PharmGKB:PA27889 KO:K08553 OMA:EDRHLGS
OrthoDB:EOG479F71 BindingDB:O95718 ChEMBL:CHEMBL3751 ChiTaRS:ESRRB
EvolutionaryTrace:O95718 GenomeRNAi:2103 NextBio:8507
ArrayExpress:O95718 Bgee:O95718 CleanEx:HS_ESRRB
Genevestigator:O95718 GermOnline:ENSG00000119715 GO:GO:0001834
Uniprot:O95718
Length = 508
Score = 195 (73.7 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/206 (27%), Positives = 102/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F +LS DQ+ LLQ +W E+ +L
Sbjct: 228 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILIL 286
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 287 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 342
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 343 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPLLRQT 402
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 403 AAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|F1N0K9 [details] [associations]
symbol:LOC100852315 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:DAAA02029654 EMBL:DAAA02029655
IPI:IPI00690687 ProteinModelPortal:F1N0K9
Ensembl:ENSBTAT00000016290 Uniprot:F1N0K9
Length = 478
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F LS DQ+ LLQ +W E+ +L
Sbjct: 273 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEILIL 331
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 332 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 387
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 388 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPLLRQT 447
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 448 AAKAVQHFYSIKLQGKVPMHKLFLEM 473
>MGI|MGI:1346832 [details] [associations]
symbol:Esrrb "estrogen related receptor, beta" species:10090
"Mus musculus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IMP] [GO:0001834 "trophectodermal
cell proliferation" evidence=IMP] [GO:0001892 "embryonic placenta
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1346832 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000980 GO:GO:0003713 GO:GO:0001892 GO:GO:0019827
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X89594 EMBL:S82458
EMBL:AK052256 EMBL:AC126685 EMBL:AC132189 EMBL:BC132595
EMBL:BC132597 IPI:IPI00874774 IPI:IPI01026653 PIR:S58087
RefSeq:NP_001152972.1 RefSeq:NP_036064.3 UniGene:Mm.235550
ProteinModelPortal:Q61539 DIP:DIP-46110N IntAct:Q61539
STRING:Q61539 PhosphoSite:Q61539 PRIDE:Q61539
Ensembl:ENSMUST00000021680 Ensembl:ENSMUST00000167891 GeneID:26380
KEGG:mmu:26380 InParanoid:Q61539 NextBio:304293 CleanEx:MM_ESRRB
Genevestigator:Q61539 GermOnline:ENSMUSG00000021255 Uniprot:Q61539
Length = 433
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 47/186 (25%), Positives = 93/186 (50%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ L+F+ + W + + F +L+ DQ+ LLQ +W E+ +L + S+P+D L
Sbjct: 244 CELADRELVFL-INWAKHIPGFPSLTLGDQMSLLQSAWMEILILGIVYRSLPYDDKLAYA 302
Query: 151 CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
+ + V + + + I +++ R+++L + E +KA+ L ++ + + +
Sbjct: 303 EDYIMDEEHSRLVGLLDLYRAILQLVRRYKKLKVEKEEFMILKALALANSDSMYIENLEA 362
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQ 270
V+ LQD L DY + +P R G+LLL LP LR ++ + + G +P+
Sbjct: 363 VQKLQDLLHEALQDYELSQRHEEPRRAGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMH 422
Query: 271 RLLGDM 276
+L +M
Sbjct: 423 KLFLEM 428
>UNIPROTKB|F1S2P9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:CT757460 Ensembl:ENSSSCT00000002655
Uniprot:F1S2P9
Length = 504
Score = 194 (73.4 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/206 (27%), Positives = 101/206 (49%)
Query: 77 PHPGLLQ--ILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL 134
P PG+ + I C + R L + + W + + F LS DQ+ LLQ +W E+ +L
Sbjct: 228 PPPGMPEGDIKALTTLC-DLADRELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEILIL 286
Query: 135 HLAQWSIPWDLSLLINCEKARERLPPDD-VRVNNEIKLIQEILA---RFRQLSPDGSECG 190
+ S+P+D L+ A + + ++ R+ ++L + IL R+++L + E
Sbjct: 287 GIVYRSLPYDDKLVY----AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFV 342
Query: 191 CMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+KA+ L ++ + D + V+ LQD L DY + +P R G+LLL LP LR
Sbjct: 343 TLKALALANSDSMYIEDLEAVQKLQDLLHEALQDYELSQRHEEPRRTGKLLLTLPLLRQT 402
Query: 251 RQSTIERLFFKETIGDIPIQRLLGDM 276
++ + + G +P+ +L +M
Sbjct: 403 AAKAVQHFYSIKLQGKVPMHKLFLEM 428
>FB|FBgn0004914 [details] [associations]
symbol:Hnf4 "Hepatocyte nuclear factor 4" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0007492 "endoderm development"
evidence=NAS] [GO:0008610 "lipid biosynthetic process"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IDA]
[GO:0034440 "lipid oxidation" evidence=IDA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
EMBL:AE014134 GO:GO:0016042 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 EMBL:U70874 PIR:S36218
RefSeq:NP_723414.1 UniGene:Dm.4524 ProteinModelPortal:P49866
SMR:P49866 MINT:MINT-1331960 STRING:P49866 PaxDb:P49866
EnsemblMetazoa:FBtr0079749 GeneID:44544 KEGG:dme:Dmel_CG9310
CTD:44544 FlyBase:FBgn0004914 InParanoid:P49866 KO:K08704
OrthoDB:EOG4Z08MV GenomeRNAi:44544 NextBio:837399 Bgee:P49866
GermOnline:CG9310 GO:GO:0034440 Uniprot:P49866
Length = 666
Score = 195 (73.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 59/193 (30%), Positives = 95/193 (49%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPW-DLSLLI 149
C+ +LL + V W + + F L DQ+ LL+ E LL L++ S+ D+ LL
Sbjct: 238 CESMKQQLLTL-VEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLLLS 296
Query: 150 N-CEKARERLPPDDVRVNNEI-----KLIQEILARFRQLSPDGSECGCMKAVILFTPETP 203
N C R P V N +I ++I E++ + + D +E C+KA++ F P
Sbjct: 297 NNCVITRH-CPDPLVSPNLDISRIGARIIDELVTVMKDVGIDDTEFACIKALVFFDPNAK 355
Query: 204 GLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 263
GL + ++ L+ Q L DY+ R RFG +LL+LP L+++ IE++ F +
Sbjct: 356 GLNEPHRIKSLRHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQFAKI 415
Query: 264 IGDIPIQRLLGDM 276
G I LL +M
Sbjct: 416 FGVAHIDSLLQEM 428
>UNIPROTKB|F1NBB9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0001892
"embryonic placenta development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
OMA:EDRHLGS EMBL:AADN02003482 EMBL:AADN02003483 IPI:IPI00811660
Ensembl:ENSGALT00000016888 Uniprot:F1NBB9
Length = 438
Score = 190 (71.9 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 49/184 (26%), Positives = 94/184 (51%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F LS DQ+ LLQ +W E+ +L + S+P++ L+ A +
Sbjct: 254 RELVVIIGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPYEDKLVY----AED 309
Query: 157 RLPPDD-VRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVE 212
+ ++ R+ ++L I +++ R+++L + E +KA+ L ++ + D V+
Sbjct: 310 YIMDEEHSRLTGLLELYLAILQLVRRYKKLKVEKEEFVTLKALALANSDSMHIEDMDAVQ 369
Query: 213 MLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
LQD L DY + + +P R G+LLL LP LR ++ + + G +P+ +L
Sbjct: 370 KLQDLLHEALQDYELSQRNEEPRRAGKLLLTLPLLRQTAAKAVQHFYSIKLQGKVPMHKL 429
Query: 273 LGDM 276
+M
Sbjct: 430 FLEM 433
>RGD|1359557 [details] [associations]
symbol:Esrrb "estrogen-related receptor beta" species:10116
"Rattus norvegicus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA;ISO]
[GO:0001834 "trophectodermal cell proliferation" evidence=IEA;ISO]
[GO:0001892 "embryonic placenta development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1359557
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OMA:EDRHLGS OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X51417
EMBL:AY383731 IPI:IPI00194043 RefSeq:NP_001008516.2
UniGene:Rn.104984 ProteinModelPortal:P11475 SMR:P11475
STRING:P11475 PhosphoSite:P11475 PRIDE:P11475
Ensembl:ENSRNOT00000013867 GeneID:299210 KEGG:rno:299210
UCSC:RGD:1359557 InParanoid:P11475 NextBio:645036
Genevestigator:P11475 Uniprot:P11475
Length = 433
Score = 189 (71.6 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 47/186 (25%), Positives = 90/186 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C L+F+ + W + + F L+ DQ+ LLQ +W E+ +L + S+P+D L
Sbjct: 244 CDLADRELVFL-ISWAKHIPGFSNLTLGDQMSLLQSAWMEILILGIVYRSLPYDDKLAYA 302
Query: 151 CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
+ + V + + I +++ R+++L + E +KA+ L ++ + + +
Sbjct: 303 EDYIMDEEHSRLVGLLELYRAILQLVRRYKKLKVEKEEFVMLKALALANSDSMYIENLEA 362
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQ 270
V+ LQD L DY + +P R G+LLL LP LR ++ + + G +P+
Sbjct: 363 VQKLQDLLHEALQDYELSQRHEEPRRAGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMH 422
Query: 271 RLLGDM 276
+L +M
Sbjct: 423 KLFLEM 428
>UNIPROTKB|F1SA88 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:CU463901
EMBL:CU929762 ProteinModelPortal:F1SA88 SMR:F1SA88
Ensembl:ENSSSCT00000011830 Uniprot:F1SA88
Length = 396
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 212 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 271
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 272 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 328
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 329 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 388
Query: 274 GDM 276
+M
Sbjct: 389 LEM 391
>UNIPROTKB|J9NWD9 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AAEX03018324 GeneID:478961
KEGG:cfa:478961 RefSeq:XP_003434352.1 ProteinModelPortal:J9NWD9
Ensembl:ENSCAFT00000046515 Uniprot:J9NWD9
Length = 435
Score = 184 (69.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 251 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 310
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 311 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 367
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 368 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 427
Query: 274 GDM 276
+M
Sbjct: 428 LEM 430
>UNIPROTKB|F1NBB5 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107
IPI:IPI00579920 ProteinModelPortal:F1NBB5
Ensembl:ENSGALT00000016889 ArrayExpress:F1NBB5 Uniprot:F1NBB5
Length = 393
Score = 183 (69.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 211 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYAEDYIMD 270
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 271 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 327
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 328 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 387
Query: 274 GDM 276
+M
Sbjct: 388 LEM 390
>UNIPROTKB|E1BC39 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104391 GO:GO:0003708
OMA:RMSSKDR EMBL:DAAA02042485 EMBL:DAAA02042486 EMBL:DAAA02042487
IPI:IPI00685955 Ensembl:ENSBTAT00000061126 Uniprot:E1BC39
Length = 450
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 266 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 325
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 326 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 382
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 383 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 442
Query: 274 GDM 276
+M
Sbjct: 443 LEM 445
>UNIPROTKB|E2R7U1 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 OMA:RMSSKDR EMBL:AAEX03018324
RefSeq:XP_849276.1 ProteinModelPortal:E2R7U1
Ensembl:ENSCAFT00000017132 GeneID:478961 KEGG:cfa:478961
BindingDB:E2R7U1 NextBio:20854219 Uniprot:E2R7U1
Length = 458
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 274 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 333
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 334 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 390
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 391 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 450
Query: 274 GDM 276
+M
Sbjct: 451 LEM 453
>UNIPROTKB|P62508 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0050682 "AF-2 domain binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0045893 GO:GO:0005654 EMBL:CH471100 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367
DrugBank:DB00255 eggNOG:NOG282629 HOVERGEN:HBG108344 EMBL:AF094518
EMBL:AB020639 EMBL:AF058291 EMBL:AY388456 EMBL:AY388457
EMBL:AY388458 EMBL:AY388459 EMBL:AY388460 EMBL:AY388461
EMBL:AK131193 EMBL:AK290945 EMBL:AK291028 EMBL:AK291647
EMBL:CR749497 EMBL:AY528719 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 EMBL:BC008218 EMBL:BC064700
EMBL:AF117255 IPI:IPI00025743 IPI:IPI00427737 IPI:IPI00554597
IPI:IPI00940244 RefSeq:NP_001127757.1 RefSeq:NP_001230434.1
RefSeq:NP_001230435.1 RefSeq:NP_001230436.1 RefSeq:NP_001230438.1
RefSeq:NP_001230439.1 RefSeq:NP_001230440.1 RefSeq:NP_001230441.1
RefSeq:NP_001230442.1 RefSeq:NP_001230443.1 RefSeq:NP_001230444.1
RefSeq:NP_001230447.1 RefSeq:NP_001230448.1 RefSeq:NP_001429.2
RefSeq:NP_996317.1 RefSeq:NP_996318.1 UniGene:Hs.444225
UniGene:Hs.738938 PDB:1KV6 PDB:1TFC PDB:1VJB PDB:2E2R PDB:2EWP
PDB:2GP7 PDB:2GPO PDB:2GPP PDB:2GPU PDB:2GPV PDB:2P7A PDB:2P7G
PDB:2P7Z PDB:2ZAS PDB:2ZBS PDB:2ZKC PDBsum:1KV6 PDBsum:1TFC
PDBsum:1VJB PDBsum:2E2R PDBsum:2EWP PDBsum:2GP7 PDBsum:2GPO
PDBsum:2GPP PDBsum:2GPU PDBsum:2GPV PDBsum:2P7A PDBsum:2P7G
PDBsum:2P7Z PDBsum:2ZAS PDBsum:2ZBS PDBsum:2ZKC
ProteinModelPortal:P62508 SMR:P62508 IntAct:P62508
MINT:MINT-4824700 STRING:P62508 PhosphoSite:P62508 DMDM:50402102
PRIDE:P62508 DNASU:2104 Ensembl:ENST00000359162
Ensembl:ENST00000360012 Ensembl:ENST00000361395
Ensembl:ENST00000361525 Ensembl:ENST00000366938
Ensembl:ENST00000366940 Ensembl:ENST00000391890
Ensembl:ENST00000408911 Ensembl:ENST00000463665
Ensembl:ENST00000487276 Ensembl:ENST00000493603
Ensembl:ENST00000493748 GeneID:2104 KEGG:hsa:2104 UCSC:uc001hkw.2
CTD:2104 GeneCards:GC01M216676 HGNC:HGNC:3474 HPA:HPA044678
MIM:602969 neXtProt:NX_P62508 PharmGKB:PA27891 InParanoid:P62508
KO:K08554 BindingDB:P62508 ChEMBL:CHEMBL4245 ChiTaRS:ESRRG
EvolutionaryTrace:P62508 GenomeRNAi:2104 NextBio:8511
ArrayExpress:P62508 Bgee:P62508 Genevestigator:P62508
GermOnline:ENSG00000196482 GO:GO:0050682 GO:GO:0003708
Uniprot:P62508
Length = 458
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 274 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 333
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 334 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 390
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 391 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 450
Query: 274 GDM 276
+M
Sbjct: 451 LEM 453
>MGI|MGI:1347056 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=NAS] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1347056
GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005516 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AF117254 EMBL:AB093266
EMBL:AK052731 EMBL:BC082324 IPI:IPI00453754 IPI:IPI00468998
RefSeq:NP_001230721.1 RefSeq:NP_036065.1 UniGene:Mm.388156
UniGene:Mm.421613 UniGene:Mm.89989 PDB:1S9P PDB:1S9Q PDBsum:1S9P
PDBsum:1S9Q ProteinModelPortal:P62509 SMR:P62509 IntAct:P62509
STRING:P62509 PhosphoSite:P62509 PRIDE:P62509
Ensembl:ENSMUST00000027906 Ensembl:ENSMUST00000110938
Ensembl:ENSMUST00000110939 GeneID:26381 KEGG:mmu:26381
UCSC:uc007eaa.1 UCSC:uc007eab.1 InParanoid:P62509 OMA:RMSSKDR
BindingDB:P62509 NextBio:304297 Bgee:P62509 CleanEx:MM_ESRRG
Genevestigator:P62509 GermOnline:ENSMUSG00000026610 Uniprot:P62509
Length = 458
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 274 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 333
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 334 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 390
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 391 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 450
Query: 274 GDM 276
+M
Sbjct: 451 LEM 453
>RGD|1303236 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0050682 "AF-2 domain binding"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1303236
GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 DrugBank:DB00255 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71 CTD:2104 KO:K08554
GO:GO:0050682 GO:GO:0003708 OMA:RMSSKDR EMBL:AB126962 EMBL:AB126963
EMBL:AY341057 IPI:IPI00421426 IPI:IPI00454520 RefSeq:NP_976081.1
UniGene:Rn.214491 ProteinModelPortal:P62510 SMR:P62510
STRING:P62510 PhosphoSite:P62510 PRIDE:P62510
Ensembl:ENSRNOT00000003489 GeneID:360896 KEGG:rno:360896
UCSC:RGD:1303236 InParanoid:P62510 BindingDB:P62510 NextBio:674519
Genevestigator:P62510 GermOnline:ENSRNOG00000002593 Uniprot:P62510
Length = 458
Score = 184 (69.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 274 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 333
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 334 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 390
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 391 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 450
Query: 274 GDM 276
+M
Sbjct: 451 LEM 453
>UNIPROTKB|F8W8J3 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:AL445650 EMBL:AL512650 EMBL:AC096635 EMBL:AC096634
EMBL:AL391216 EMBL:AL512626 EMBL:AL513312 EMBL:AL603752
IPI:IPI00554597 RefSeq:NP_001230447.1 UniGene:Hs.444225
UniGene:Hs.738938 DNASU:2104 GeneID:2104 KEGG:hsa:2104 CTD:2104
HGNC:HGNC:3474 KO:K08554 ChiTaRS:ESRRG GenomeRNAi:2104 NextBio:8511
GO:GO:0003708 OMA:RMSSKDR ProteinModelPortal:F8W8J3 SMR:F8W8J3
Ensembl:ENST00000366937 UCSC:uc001hkx.2 ArrayExpress:F8W8J3
Bgee:F8W8J3 Uniprot:F8W8J3
Length = 470
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 286 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYADDYIMD 345
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 346 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 402
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 403 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 462
Query: 274 GDM 276
+M
Sbjct: 463 LEM 465
>UNIPROTKB|Q5UKY7 [details] [associations]
symbol:ESRRG "Nuclear receptor subfamily 3 group B member
3" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005496
"steroid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 CTD:2104 KO:K08554 EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107 EMBL:AY702438
IPI:IPI00601951 RefSeq:NP_001007082.1 UniGene:Gga.11217 SMR:Q5UKY7
STRING:Q5UKY7 Ensembl:ENSGALT00000015707 GeneID:421357
KEGG:gga:421357 InParanoid:Q5UKY7 NextBio:20824134 Uniprot:Q5UKY7
Length = 435
Score = 183 (69.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 45/183 (24%), Positives = 91/183 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ + +
Sbjct: 251 RELVVIIGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDELVYAEDYIMD 310
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 311 E---DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 367
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLL 273
LQD L DY G++ P R G++L+ LP LR ++ + + G +P+ +L
Sbjct: 368 LQDVLHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLF 427
Query: 274 GDM 276
+M
Sbjct: 428 LEM 430
>ZFIN|ZDB-GENE-030821-2 [details] [associations]
symbol:esrrga "estrogen-related receptor gamma a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030821-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CT027582 IPI:IPI00489991
ProteinModelPortal:F1QH45 Ensembl:ENSDART00000126966
ArrayExpress:F1QH45 Bgee:F1QH45 Uniprot:F1QH45
Length = 508
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 46/179 (25%), Positives = 89/179 (49%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F TLS DQ+ LLQ +W E+ +L + S+ ++ L+ E
Sbjct: 324 RELVVNIGWAKHIPGFSTLSLADQMSLLQSAWMEILILRVVYRSLSFE-DKLVYAEDYI- 381
Query: 157 RLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEM 213
+ D ++ + L I +++ +++ + + E +KA+ L ++ + D + V+
Sbjct: 382 -MDEDQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQK 440
Query: 214 LQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
LQD L DY G++ P R G+LL+ LP LR ++ + + G +P+ +L
Sbjct: 441 LQDVLHEALQDYEAGQHVEDPRRAGKLLMTLPLLRQTSTKAVQHFYSIKQDGKVPMHKL 499
>MGI|MGI:1346344 [details] [associations]
symbol:Nr0b2 "nuclear receptor subfamily 0, group B, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0032024 "positive regulation of insulin
secretion" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0042975 "peroxisome proliferator activated
receptor binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046965 "retinoid X receptor
binding" evidence=ISO] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
MGI:MGI:1346344 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0043234 GO:GO:0003677 GO:GO:0031100 GO:GO:0009749
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0032024
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0043433
HOGENOM:HOG000231151 GeneTree:ENSGT00390000015719 CTD:8431
eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J EMBL:L76567 EMBL:AY360323 EMBL:AY360324
EMBL:BC019540 IPI:IPI00123317 RefSeq:NP_035980.1 UniGene:Mm.346759
PDB:1YMT PDBsum:1YMT ProteinModelPortal:Q62227 SMR:Q62227
IntAct:Q62227 STRING:Q62227 PhosphoSite:Q62227 PRIDE:Q62227
Ensembl:ENSMUST00000042706 GeneID:23957 KEGG:mmu:23957
InParanoid:Q62227 EvolutionaryTrace:Q62227 NextBio:303792
Bgee:Q62227 CleanEx:MM_NR0B2 Genevestigator:Q62227
GermOnline:ENSMUSG00000037583 Uniprot:Q62227
Length = 260
Score = 174 (66.3 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 58/199 (29%), Positives = 90/199 (45%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLS---- 146
C+E +L V ++R L F L DQ LL+ W LFLL LAQ ++ ++++
Sbjct: 59 CREALD-VLAKTVAFLRNLPSFCHLPHEDQRRLLECCWGPLFLLGLAQDAVTFEVAEAPV 117
Query: 147 -------LLINCEKARERLPPDDVRVNN--EIKLIQEILARFRQLSPDGSECGCMKAVIL 197
LL + P D + ++ +Q L F L E +K IL
Sbjct: 118 PSILKKILLEEASSGTQGAQPSDRPQPSLAAVQWLQRCLESFWSLELGPKEYAYLKGTIL 177
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
F P+ PGL + + LQ +A L + + Y R R+LLM +L+ + + +
Sbjct: 178 FNPDVPGLRASCHIAHLQQEAHWALCEVLEPWYPASQGRLARILLMASTLKNIPGTLLVD 237
Query: 258 LFFKETIGDIPIQRLLGDM 276
LFF+ +GD+ I LL DM
Sbjct: 238 LFFRPIMGDVDITELLEDM 256
>ZFIN|ZDB-GENE-040616-4 [details] [associations]
symbol:esrrgb "estrogen-related receptor gamma b"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-4 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
EMBL:BX004824 IPI:IPI00502886 Ensembl:ENSDART00000122258
ArrayExpress:F1QRG9 Bgee:F1QRG9 Uniprot:F1QRG9
Length = 444
Score = 180 (68.4 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 48/176 (27%), Positives = 84/176 (47%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F +LS DQ+ LLQ +W E+ +L +A S+P D LL + +
Sbjct: 260 RELVLNISWAKHIPGFSSLSLSDQMSLLQSAWMEILVLRVAFRSLPCDDRLLFADDYIMD 319
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ I +++ R+R +S + E +KA+ L ++ + D + V+ LQD
Sbjct: 320 AEQAKCAGLLELHTAILQLVRRYRCMSLEREEFVTLKAIALANSDSMHIEDVEAVQGLQD 379
Query: 217 QAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L DY +S P R G+L++ LP LR + + G +P+ +L
Sbjct: 380 ALHEALLDYECVHHSEDPRRAGKLIMTLPLLRQTSAKAVRHFCSIKQDGRVPMHKL 435
>FB|FBgn0003964 [details] [associations]
symbol:usp "ultraspiracle" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0008232 "activator ecdysone receptor
complex" evidence=IDA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=IDA;NAS]
[GO:0007552 "metamorphosis" evidence=NAS] [GO:0045596 "negative
regulation of cell differentiation" evidence=TAS] [GO:0005700
"polytene chromosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0035072
"ecdysone-mediated induction of salivary gland cell autophagic cell
death" evidence=NAS] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0040034 "regulation of development, heterochronic"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005500 "juvenile hormone binding" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0030425
"dendrite" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0035075 "response to ecdysone" evidence=IMP]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0042803
GO:GO:0046872 GO:GO:0030425 EMBL:AE014298 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0016322 GO:GO:0007298 GO:GO:0048813
GO:GO:0007517 EMBL:AL031765 GO:GO:0007281 GO:GO:0046982
GO:GO:0040034 GO:GO:0005700 GO:GO:0035072 PDB:1R0O PDB:2HAN
PDBsum:1R0O PDBsum:2HAN GO:GO:0004884 GO:GO:0045596
GeneTree:ENSGT00690000101777 EMBL:X53417 EMBL:X52591 EMBL:AY069393
EMBL:X53379 PIR:A35872 PIR:T13737 RefSeq:NP_476781.1 UniGene:Dm.25
PDB:1HG4 PDBsum:1HG4 ProteinModelPortal:P20153 SMR:P20153
DIP:DIP-645N IntAct:P20153 MINT:MINT-824030 STRING:P20153
PaxDb:P20153 PRIDE:P20153 EnsemblMetazoa:FBtr0070346
EnsemblMetazoa:FBtr0333803 GeneID:31165 KEGG:dme:Dmel_CG4380
CTD:31165 FlyBase:FBgn0003964 InParanoid:P20153 KO:K14030
OMA:MGDSRDS OrthoDB:EOG45HQD3 PhylomeDB:P20153
EvolutionaryTrace:P20153 GenomeRNAi:31165 NextBio:772247
Bgee:P20153 GermOnline:CG4380 GO:GO:0008230 GO:GO:0005500
Uniprot:P20153
Length = 508
Score = 151 (58.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 29/103 (28%), Positives = 56/103 (54%)
Query: 170 KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGR 229
+++ E+ + ++L+ D E C+KA+IL+ P+ G+ +EM +++ L ++ R
Sbjct: 388 RILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYACLDEHCRLE 447
Query: 230 YSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
+ RF +LLL LP+LR++ + LF D P++ L
Sbjct: 448 HPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEEL 490
Score = 72 (30.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI 141
CQ +L F V + R + F + DQ++LL+ +W EL + ++A SI
Sbjct: 282 CQVVNKQL-FQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCSI 331
>ZFIN|ZDB-GENE-040616-2 [details] [associations]
symbol:esrrb "estrogen-related receptor beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040616-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CABZ01058931 EMBL:CABZ01058932
EMBL:CABZ01058933 EMBL:CABZ01073498 EMBL:CABZ01073499
EMBL:CABZ01073500 EMBL:CABZ01113871 IPI:IPI00504271
ProteinModelPortal:F1R2J7 Ensembl:ENSDART00000007600 Bgee:F1R2J7
Uniprot:F1R2J7
Length = 484
Score = 178 (67.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 48/185 (25%), Positives = 95/185 (51%)
Query: 97 RLLFMAVRWVRCL-APFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKAR 155
R L + + W + + A F +LS DQ+ LLQ +W E+ +L + S+P++ L+ +
Sbjct: 298 RELVVIIGWAKHIPAGFSSLSLGDQMSLLQSAWMEILILSIVFRSLPYEDELVYAEDYVM 357
Query: 156 ERLPPDDVRVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILF-TPETPGLVDAQPV 211
+ + R+ + L I +++ ++++L + E +KA+ L + ++ + D + V
Sbjct: 358 DE---EHSRLTGLLDLYLSILQLVRKYKKLKVEKEEFVTLKAIALANSTDSMHIEDVESV 414
Query: 212 EMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQR 271
+ LQD L DY +++ P R G+LL+ LP LR I+ + + G +P+ +
Sbjct: 415 QKLQDALHEALQDYESCQHAEDPRRAGKLLMTLPLLRQTATKAIQHFYSIKMQGKVPMHK 474
Query: 272 LLGDM 276
L +M
Sbjct: 475 LFLEM 479
>UNIPROTKB|G5E5I7 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060008 "Sertoli cell differentiation" evidence=IEA]
[GO:0050682 "AF-2 domain binding" evidence=IEA] [GO:0045596
"negative regulation of cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042788 "polysomal
ribosome" evidence=IEA] [GO:0035258 "steroid hormone receptor
binding" evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=IEA]
[GO:0032448 "DNA hairpin binding" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 CTD:190 KO:K08562
OMA:CCFCGED GeneTree:ENSGT00390000015719 EMBL:DAAA02073850
RefSeq:NP_001192786.1 UniGene:Bt.13026 Ensembl:ENSBTAT00000020641
GeneID:281949 KEGG:bta:281949 NextBio:20805825 Uniprot:G5E5I7
Length = 471
Score = 136 (52.9 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 34/109 (31%), Positives = 56/109 (51%)
Query: 168 EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVR 227
E++ I+ LA+ R L E +K +LF P+ PGL + ++ LQ Q IL ++VR
Sbjct: 358 EVQTIKGFLAKCRSLDITTKEYAYLKGTVLFNPDLPGLQCVKYIQGLQWGTQQILSEHVR 417
Query: 228 GRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+ RF L L LR + +T+ LFF+ IG + + ++ +M
Sbjct: 418 MTHGVYRARFAELNSALFLLRFISANTLAELFFRPIIGTVSMDDMMLEM 466
Score = 86 (35.3 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL + ++ LQ Q IL ++VR + RF L L LR + +T+ LFF
Sbjct: 391 DLPGLQCVKYIQGLQWGTQQILSEHVRMTHGVYRARFAELNSALFLLRFISANTLAELFF 450
Query: 344 KETIGDIPIQRLLGDM 359
+ IG + + ++ +M
Sbjct: 451 RPIIGTVSMDDMMLEM 466
Score = 84 (34.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+LL+ W L LL LAQ
Sbjct: 256 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLLRSCWAPLLLLELAQ 302
Score = 39 (18.8 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 71 ATHQPPPHPGLL 82
A ++PPP P LL
Sbjct: 330 AGNEPPPQPPLL 341
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 77 PHPG--LLQILMSAEKCQET 94
P G L +LM+A++ QET
Sbjct: 74 PRQGSILYNLLMNAKQAQET 93
>UNIPROTKB|H7C3R1 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR008946 Pfam:PF00104
SMART:SM00430 GO:GO:0005634 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC090954
EMBL:AC090937 HGNC:HGNC:7972 ChiTaRS:NR2C2
ProteinModelPortal:H7C3R1 Ensembl:ENST00000413194 Bgee:H7C3R1
Uniprot:H7C3R1
Length = 173
Score = 153 (58.9 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 44/135 (32%), Positives = 70/135 (51%)
Query: 111 PFQTLSKRD-QLLLLQESWKELFLLHLAQ----WSIPWDLSLLIN-CEKA--RERLPPDD 162
PF + ++D L++ W ELF L LAQ S+ L+ ++N + + ++L D
Sbjct: 1 PFY-IPRQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDR 59
Query: 163 VR-VNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCI 221
++ V I +QE +L DG E +KA++LF+P+ PGL +E Q++AQ
Sbjct: 60 IKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQME 119
Query: 222 LGDYVRGRYSRQPTR 236
L DYV+ YS R
Sbjct: 120 LQDYVQKTYSEDTYR 134
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 171 (65.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 243 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 301
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 302 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 361
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTR 236
VE+L+++ L Y + +Y Q R
Sbjct: 362 EVEVLREKVYASLETYCKQKYPEQQGR 388
>UNIPROTKB|E1BML7 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043433 "negative regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043433 GeneTree:ENSGT00390000015719 CTD:8431 KO:K08563
OMA:HRTCREA EMBL:DAAA02006367 IPI:IPI00694275 RefSeq:XP_002685805.1
RefSeq:XP_592675.1 ProteinModelPortal:E1BML7
Ensembl:ENSBTAT00000019772 GeneID:514770 KEGG:bta:514770
NextBio:20871503 Uniprot:E1BML7
Length = 260
Score = 165 (63.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 61/208 (29%), Positives = 96/208 (46%)
Query: 82 LQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI 141
+Q+ C+E +L + ++R L F L D+ LL+ W LFLL LAQ ++
Sbjct: 50 VQLCTPHRTCREALD-VLAKTLAFLRNLPSFCQLPHHDRRQLLRGCWGPLFLLGLAQDTV 108
Query: 142 PWDL------SLL--INCEK----ARERLPPDDVRVN-NEIKLIQEILARFRQLSPDGSE 188
+ + S+L I EK A PD + + E++ +Q L F L E
Sbjct: 109 TFQVAEVPMPSILKKILLEKPSNGAGSSQRPDRPQPSLAEVQWLQCCLESFWSLELGPKE 168
Query: 189 CGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLR 248
+K ILF P+ PGL + + LQ +A L + + +R R+LL +L+
Sbjct: 169 YAYLKGTILFNPDVPGLYASSHIGHLQQEAHQALWEVLEPWCPAGQSRLARVLLTASTLK 228
Query: 249 AVRQSTIERLFFKETIGDIPIQRLLGDM 276
++ S + LF + IGD+ I LL DM
Sbjct: 229 SIPPSLLGDLFLRPVIGDVDIADLLEDM 256
>ZFIN|ZDB-GENE-070130-1 [details] [associations]
symbol:nr0b1 "nuclear receptor subfamily 0, group B,
member 1" species:7955 "Danio rerio" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030104 "water homeostasis"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
ZFIN:ZDB-GENE-070130-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0030104 GeneTree:ENSGT00390000015719 EMBL:CR352256
IPI:IPI00774565 ProteinModelPortal:F1QNF1
Ensembl:ENSDART00000128468 Uniprot:F1QNF1
Length = 292
Score = 167 (63.8 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 53/197 (26%), Positives = 93/197 (47%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
C+ +A +L +++V+ + F+ L DQ L++ W L +L +AQ I ++ S
Sbjct: 94 CKAASA-VLVKTLKFVKNVPCFRELPADDQHTLVRSGWAPLLVLGMAQDRIDFETSETQE 152
Query: 151 CEKARERLPPDDVRVNNE-----IKL--IQEILARFRQ---LSPDGSECGCMKAVILFTP 200
+ L + +N+ + L +Q I R+ L E +K ILF P
Sbjct: 153 PSMLQRILTSGQDKQDNQSHNGGVALTDVQGIKMFLRKCWGLDISTKEYAYLKGAILFNP 212
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ GL ++ LQ +A L +YV+ + RF +L L L LR++ + + LFF
Sbjct: 213 DVAGLQCQHYIQALQSEANQALNEYVKMIHRGDSARFAKLFLALSMLRSINANVVAGLFF 272
Query: 261 KETIGDIPIQRLLGDMY 277
K IG + ++ LL +M+
Sbjct: 273 KPVIGAVNMEELLLEMF 289
>UNIPROTKB|E2R3L9 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060008 "Sertoli cell differentiation"
evidence=IEA] [GO:0050682 "AF-2 domain binding" evidence=IEA]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IEA] [GO:0035258 "steroid
hormone receptor binding" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=IEA] [GO:0032448 "DNA hairpin binding" evidence=IEA]
[GO:0030325 "adrenal gland development" evidence=IEA] [GO:0030238
"male sex determination" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 KO:K08562 OMA:CCFCGED
GeneTree:ENSGT00390000015719 EMBL:AAEX03026238
RefSeq:XP_003640302.1 Ensembl:ENSCAFT00000021662 GeneID:100855508
KEGG:cfa:100855508 Uniprot:E2R3L9
Length = 471
Score = 130 (50.8 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 168 EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVR 227
E++ I+ LA+ L E +K +LF P+ PGL + ++ LQ AQ IL D++R
Sbjct: 358 EVQAIKCFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLHCVKYIQGLQWGAQQILSDHIR 417
Query: 228 GRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+ RF L L LR V I LFF+ IG + + ++ +M
Sbjct: 418 MTHRGYQARFTELNSALFLLRYVNADVIVELFFRPIIGSVSMDDMMLEM 466
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL + ++ LQ AQ IL D++R + RF L L LR V I LFF
Sbjct: 391 DLPGLHCVKYIQGLQWGAQQILSDHIRMTHRGYQARFTELNSALFLLRYVNADVIVELFF 450
Query: 344 KETIGDIPIQRLLGDM 359
+ IG + + ++ +M
Sbjct: 451 RPIIGSVSMDDMMLEM 466
Score = 86 (35.3 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ SW L LL LAQ
Sbjct: 256 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNSWAPLLLLELAQ 302
>UNIPROTKB|F1SKS7 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9823 "Sus scrofa" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0007276 "gamete generation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0007276 GeneTree:ENSGT00670000097927 OMA:HSCKTSV
EMBL:CU633730 Ensembl:ENSSSCT00000006145 Uniprot:F1SKS7
Length = 345
Score = 168 (64.2 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 159 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 215
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 216 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 275
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 276 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 315
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 171 (65.3 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 41/147 (27%), Positives = 72/147 (48%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLIN 150
CQ +L F V W + + F +L DQ++LL+ W EL + + SI +L+
Sbjct: 339 CQAADKQL-FTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLA 397
Query: 151 CEKARERLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQ 209
R V +++ E++++ R + D +E GC++A+ILF P+ GL +
Sbjct: 398 TGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPS 457
Query: 210 PVEMLQDQAQCILGDYVRGRYSRQPTR 236
VE+L+++ L Y + +Y Q R
Sbjct: 458 EVEVLREKVYASLETYCKQKYPEQQGR 484
Score = 40 (19.1 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 30 SPDLLPPNGISSVKIPPTVLYPP 52
SPD PN + PP+ PP
Sbjct: 81 SPDSSSPNPLPQGAAPPSPPGPP 103
>UNIPROTKB|F1NVM8 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007276 "gamete
generation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AADN02026331
EMBL:AADN02026332 IPI:IPI00598740 Ensembl:ENSGALT00000001607
Uniprot:F1NVM8
Length = 435
Score = 169 (64.5 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLH-LAQWS--IPWDLSLLINCEKA 154
LLF + W++ L F LS +D LL +W+EL LL L +S I DL+ +
Sbjct: 249 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLA-----DVT 303
Query: 155 RERLPPDDV--RVNNE-IKLIQEILARFR---QLSPDGSECGCMKAVILFTPETPGLVDA 208
+ P DD R + E +++++ ++ FR QL E CMKA+ + GL +A
Sbjct: 304 SKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNA 363
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + + D+ +Y QP RF L++ LP +R +
Sbjct: 364 SQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYI 405
>UNIPROTKB|F1MXG9 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 EMBL:DAAA02032107 IPI:IPI00711176
Ensembl:ENSBTAT00000052227 Uniprot:F1MXG9
Length = 425
Score = 168 (64.2 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 239 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 295
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 296 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 355
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 356 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 395
>UNIPROTKB|F1PHV1 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:AAEX03006888
EMBL:AAEX03006889 Ensembl:ENSCAFT00000032203 Uniprot:F1PHV1
Length = 437
Score = 168 (64.2 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 251 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 307
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 308 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 367
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 368 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 407
>UNIPROTKB|G3N294 [details] [associations]
symbol:NR6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0007276 "gamete generation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0007276
GeneTree:ENSGT00670000097927 OMA:HSCKTSV EMBL:DAAA02032107
Ensembl:ENSBTAT00000065207 Uniprot:G3N294
Length = 448
Score = 168 (64.2 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 246 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 302
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 303 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 362
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 363 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 402
>ZFIN|ZDB-GENE-991207-19 [details] [associations]
symbol:nr6a1a "nuclear receptor subfamily 6, group
A, member 1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048513 "organ development"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0016477
"cell migration" evidence=ISS] [GO:0022008 "neurogenesis"
evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-991207-19 GO:GO:0005634
GO:GO:0005737 GO:GO:0042803 GO:GO:0016477 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0030917 EMBL:AJ007703 IPI:IPI00507829
RefSeq:NP_571331.2 UniGene:Dr.8104 HSSP:P03372
ProteinModelPortal:Q9PU65 SMR:Q9PU65 STRING:Q9PU65 GeneID:30506
KEGG:dre:30506 CTD:30506 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP NextBio:20806895
ArrayExpress:Q9PU65 Uniprot:Q9PU65
Length = 477
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/176 (27%), Positives = 81/176 (46%)
Query: 83 QILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIP 142
Q+ + A C+ LLF + W++ L F LS D LL +W+EL LL A ++
Sbjct: 261 QVELFALLCR-LADELLFRQISWIKKLPFFCDLSIEDYTRLLSATWQELILL--ACLTV- 316
Query: 143 WDLSLLINCEKARERLPPDDVRVNN------EI--KLIQEILARFRQLSPDGSECGCMKA 194
+ +L + + P D +++ E+ KLI + +F QL E CMKA
Sbjct: 317 YSAQVLGDLANVTHKYTPSDDELHSFSEDGMEVMEKLIY-LFRKFHQLKVSNEEYACMKA 375
Query: 195 VILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+ + GL + +E L + + DY +Y QP RF +++ LP +R +
Sbjct: 376 INFLNQDIRGLTNVTQLEQLNKRYWYVCQDYTEYKYPHQPKRFPEIMMCLPEIRCI 431
>UNIPROTKB|A0P8Z4 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0007275 GO:GO:0005634 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 EMBL:AP009124 CTD:2649 EMBL:AB248749
RefSeq:NP_001090968.1 UniGene:Ssc.51714 ProteinModelPortal:A0P8Z4
SMR:A0P8Z4 STRING:A0P8Z4 GeneID:100038028 KEGG:ssc:100038028
Uniprot:A0P8Z4
Length = 479
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 293 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 349
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 350 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 409
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 410 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 449
>UNIPROTKB|Q15406 [details] [associations]
symbol:NR6A1 "Nuclear receptor subfamily 6 group A member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0007276 "gamete generation" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0042803 GO:GO:0046872
GO:GO:0008283 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0007283 GO:GO:0005667 GO:GO:0000122 GO:GO:0006367
EMBL:AL354928 eggNOG:NOG253308 HOVERGEN:HBG052664 KO:K08561
OrthoDB:EOG4SJ5DP EMBL:S83309 EMBL:U80802 EMBL:U64876 EMBL:AF004291
EMBL:X99975 EMBL:AL158075 EMBL:AL354979 EMBL:BC030600
IPI:IPI00017258 IPI:IPI00220041 IPI:IPI00413606 IPI:IPI00743885
IPI:IPI00848326 RefSeq:NP_001480.3 RefSeq:NP_201591.2
UniGene:Hs.586460 ProteinModelPortal:Q15406 SMR:Q15406
IntAct:Q15406 MINT:MINT-1404458 STRING:Q15406 PhosphoSite:Q15406
DMDM:12643728 PRIDE:Q15406 DNASU:2649 Ensembl:ENST00000344523
Ensembl:ENST00000373584 Ensembl:ENST00000416460
Ensembl:ENST00000487099 GeneID:2649 KEGG:hsa:2649 UCSC:uc004boq.1
UCSC:uc004bor.1 CTD:2649 GeneCards:GC09M127279 HGNC:HGNC:7985
MIM:602778 neXtProt:NX_Q15406 PharmGKB:PA31766 InParanoid:Q15406
OMA:HSCKTSV ChEMBL:CHEMBL1961793 ChiTaRS:NR6A1 GenomeRNAi:2649
NextBio:10454 ArrayExpress:Q15406 Bgee:Q15406 CleanEx:HS_NR6A1
Genevestigator:Q15406 GermOnline:ENSG00000148200 Uniprot:Q15406
Length = 480
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 294 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 350
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 351 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 410
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 411 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 450
>MGI|MGI:1352459 [details] [associations]
symbol:Nr6a1 "nuclear receptor subfamily 6, group A, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352459 GO:GO:0007275
GO:GO:0042803 GO:GO:0030154 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0007276
GeneTree:ENSGT00670000097927 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP CTD:2649 OMA:HSCKTSV
ChiTaRS:NR6A1 EMBL:U14666 EMBL:U09563 EMBL:AF254821 EMBL:AF254575
EMBL:AF254815 EMBL:AF254816 EMBL:AF254817 EMBL:AF254818
EMBL:AF254819 EMBL:AF254820 EMBL:AF390896 EMBL:AF390900
EMBL:AF390897 EMBL:AF390898 EMBL:AF390899 EMBL:AL844842
EMBL:AL935155 IPI:IPI00132245 IPI:IPI00752974 IPI:IPI00753585
PIR:A57053 RefSeq:NP_001153020.1 RefSeq:NP_034394.1
UniGene:Mm.439703 ProteinModelPortal:Q64249 SMR:Q64249
STRING:Q64249 PhosphoSite:Q64249 PRIDE:Q64249 DNASU:14536
Ensembl:ENSMUST00000076275 Ensembl:ENSMUST00000112877
Ensembl:ENSMUST00000142113 Ensembl:ENSMUST00000142130
Ensembl:ENSMUST00000168098 GeneID:14536 KEGG:mmu:14536
UCSC:uc012bus.1 UCSC:uc012buu.1 InParanoid:Q64249 NextBio:286194
Bgee:Q64249 CleanEx:MM_NR6A1 Genevestigator:Q64249
GermOnline:ENSMUSG00000063972 Uniprot:Q64249
Length = 495
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 309 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 365
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 366 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLTSASQ 425
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 426 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 465
>UNIPROTKB|P70033 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8355 "Xenopus laevis" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0030917 "midbrain-hindbrain
boundary development" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0048513 "organ
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917 HOVERGEN:HBG052664
KO:K08561 HSSP:P19793 CTD:2649 EMBL:U58683 EMBL:AY130967
RefSeq:NP_001084102.1 UniGene:Xl.37734 ProteinModelPortal:P70033
SMR:P70033 GeneID:399304 KEGG:xla:399304 Xenbase:XB-GENE-487596
Uniprot:P70033
Length = 435
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 51/160 (31%), Positives = 75/160 (46%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLH-LAQWS--IPWDLSLLIN---- 150
LLF + WV+ L F LS +D LL +W+EL LL + +S I DL+ + +
Sbjct: 249 LLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSITTYSKQIFGDLTDVTSKYSP 308
Query: 151 CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
E R D + V +LI + +F QL E CMKA+ + G+ A
Sbjct: 309 SEDELHRFSEDGMEVME--RLIY-LFRKFSQLKVSNEEYVCMKAINFLNQDIQGISSASQ 365
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
VE L + + D+ RY QP RF L++ LP +R +
Sbjct: 366 VEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYI 405
>UNIPROTKB|E9PSV7 [details] [associations]
symbol:Nr6a1 "Protein Nr6a1" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1564740 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0007276 GeneTree:ENSGT00670000097927
IPI:IPI00464878 Ensembl:ENSRNOT00000018751 Uniprot:E9PSV7
Length = 438
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/160 (28%), Positives = 77/160 (48%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARER 157
LLF + W++ L F LS +D LL +W+EL LL + ++ + + +
Sbjct: 252 LLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILL--SSLTV-YSKQIFGELADVTAK 308
Query: 158 LPPDDV---RVNNE-IKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
P D R ++E +++I+ ++ +F QL E CMKA+ + GL A
Sbjct: 309 YSPSDEELHRFSDEGMEVIERLIYLYHKFHQLKVSNEEYACMKAINFLNQDIRGLSSASQ 368
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
+E L + I D+ +Y+ QP RF L++ LP +R +
Sbjct: 369 LEQLNKRYWYICQDFTEYKYTHQPNRFPDLMMCLPEIRYI 408
>UNIPROTKB|E2QTG2 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0003677
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0043433 Ensembl:ENSCAFT00000019466
Uniprot:E2QTG2
Length = 260
Score = 158 (60.7 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 61/199 (30%), Positives = 95/199 (47%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL----- 145
C+E +L V +++ L F L +DQ LLL+ W LFLL LAQ ++ +++
Sbjct: 59 CREALD-VLARTVVFLKNLPSFCQLPPQDQQLLLRVCWGPLFLLGLAQDTVTFEVAEAPV 117
Query: 146 -SLL--INCEK----ARERLPPDDVRVN-NEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
S+L I E+ A PD + + ++ +Q L F L E +K IL
Sbjct: 118 PSILKKILLEEPSSGAHSGQLPDRPQPSLAAVQWLQCCLESFWSLELGPKEYAYLKETIL 177
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
F P PGL + + LQ++A L + + R R+LL +L+++ S +
Sbjct: 178 FNPGLPGLHASSHIGHLQEEAHHALCEALEPWCPAGQGRLARVLLTASTLKSIPPSLLGD 237
Query: 258 LFFKETIGDIPIQRLLGDM 276
LFF+ +GDI I LL DM
Sbjct: 238 LFFRPIVGDIDIAGLLEDM 256
>UNIPROTKB|F6V4A2 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003677 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00390000015719 CTD:8431
KO:K08563 OMA:HRTCREA EMBL:AAEX03001717 Ensembl:ENSCAFT00000019466
RefSeq:XP_854945.1 GeneID:612125 KEGG:cfa:612125 Uniprot:F6V4A2
Length = 279
Score = 159 (61.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 61/204 (29%), Positives = 97/204 (47%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL----- 145
C+E +L V +++ L F L +DQ LLL+ W LFLL LAQ ++ +++
Sbjct: 59 CREALD-VLARTVVFLKNLPSFCQLPPQDQQLLLRVCWGPLFLLGLAQDTVTFEVAEAPV 117
Query: 146 -SLL--INCEK----ARERLPPDDVRVN-NEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
S+L I E+ A PD + + ++ +Q L F L E +K IL
Sbjct: 118 PSILKKILLEEPSSGAHSGQLPDRPQPSLAAVQWLQCCLESFWSLELGPKEYAYLKETIL 177
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
F P PGL + + LQ++A L + + R R+LL +L+++ S +
Sbjct: 178 FNPGLPGLHASSHIGHLQEEAHHALCEALEPWCPAGQGRLARVLLTASTLKSIPPSLLGD 237
Query: 258 LFFKETIGDIPIQRLLGDMYTMEK 281
LFF+ +GDI I LL DM + +
Sbjct: 238 LFFRPIVGDIDIAGLLEDMLLLSQ 261
>WB|WBGene00006790 [details] [associations]
symbol:unc-55 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0010171 GO:GO:0040011 GO:GO:0030522
OMA:MENIRIF EMBL:Z75542 EMBL:EF601082 RefSeq:NP_001122482.2
UniGene:Cel.28878 ProteinModelPortal:G5ECR9 SMR:G5ECR9
EnsemblMetazoa:F55D12.4a GeneID:192082 KEGG:cel:CELE_F55D12.4
CTD:192082 WormBase:F55D12.4a Uniprot:G5ECR9
Length = 370
Score = 114 (45.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 29/125 (23%), Positives = 63/125 (50%)
Query: 152 EKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPV 211
EK+ E+ P+ V + + Q + + R D E ++AV+LF+ + L + +
Sbjct: 231 EKSEEK--PERVFDEPQFQGFQAKIDKIRDFHLDVVESSSLRAVLLFSCDEEALEEKGKI 288
Query: 212 EMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQR 271
E + ++ + + +Y + +++ R+ ++ L L++ R I RLFF +G P++
Sbjct: 289 EEIVEKLKSAVDEYCK--MNKRSERYHQICECLQLLKSTRNLPISRLFFSRLLGTTPLET 346
Query: 272 LLGDM 276
+L D+
Sbjct: 347 ILSDL 351
Score = 92 (37.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLS 146
E E A+ +F V W R L K DQL+LL+ SW +F+ LAQ + +LS
Sbjct: 148 ESIFEFAAQTIFATVNWAR--TSMSNLVKGDQLILLRHSWTPIFIFALAQSNFALNLS 203
Score = 77 (32.2 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 17/78 (21%), Positives = 40/78 (51%)
Query: 282 SYETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL 341
S + L + +E + ++ + + +Y + +++ R+ ++ L L++ R I RL
Sbjct: 276 SCDEEALEEKGKIEEIVEKLKSAVDEYCK--MNKRSERYHQICECLQLLKSTRNLPISRL 333
Query: 342 FFKETIGDIPIQRLLGDM 359
FF +G P++ +L D+
Sbjct: 334 FFSRLLGTTPLETILSDL 351
>UNIPROTKB|Q66JK1 [details] [associations]
symbol:nr6a1 "Nuclear receptor subfamily 6 group A member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0030917
"midbrain-hindbrain boundary development" evidence=ISS] [GO:0042803
"protein homodimerization activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0016477
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
GeneTree:ENSGT00670000097927 HSSP:P03372 eggNOG:NOG253308
HOGENOM:HOG000113847 HOVERGEN:HBG052664 KO:K08561 OrthoDB:EOG4SJ5DP
CTD:2649 OMA:HSCKTSV EMBL:AL630347 EMBL:CR760283 EMBL:BC080883
RefSeq:NP_001008005.1 UniGene:Str.11424 ProteinModelPortal:Q66JK1
SMR:Q66JK1 STRING:Q66JK1 Ensembl:ENSXETT00000018759 GeneID:493367
KEGG:xtr:493367 Xenbase:XB-GENE-487592 InParanoid:Q66JK1
Bgee:Q66JK1 Uniprot:Q66JK1
Length = 435
Score = 165 (63.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 51/160 (31%), Positives = 74/160 (46%)
Query: 98 LLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLH-LAQWS--IPWDLSLLIN---- 150
LLF + WV+ L F LS +D LL +W+EL LL L +S I DL+ + +
Sbjct: 249 LLFRQITWVKKLPFFCDLSIKDYTCLLSTTWQELILLSSLTTYSKQIFGDLADVTSKYSP 308
Query: 151 CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQP 210
E R D + V +LI + +F QL E CMKA+ + G+
Sbjct: 309 SEDELHRFSEDGMEVME--RLIY-LFRKFSQLKVSNEEYVCMKAINFLNQDIQGISSVSQ 365
Query: 211 VEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAV 250
VE L + + D+ RY QP RF L++ LP +R +
Sbjct: 366 VEQLNKRYWYVCQDFTEYRYPHQPNRFPDLMMCLPEVRYI 405
Score = 37 (18.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 11/41 (26%), Positives = 13/41 (31%)
Query: 35 PPNGISSVKIPPTVLYPPSGLKXXXXXXXXXXXMFLATHQP 75
P NG+S P V P S +L T P
Sbjct: 135 PGNGVSESNQPSPVSTPSSSRSMELNGFGSLRDQYLGTPGP 175
>UNIPROTKB|F1STR7 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043433 "negative regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043433 GeneTree:ENSGT00390000015719 KO:K08563 OMA:HRTCREA
EMBL:FP015947 RefSeq:XP_003127768.1 UniGene:Ssc.33438
ProteinModelPortal:F1STR7 Ensembl:ENSSSCT00000003959
GeneID:100526226 KEGG:ssc:100526226 ArrayExpress:F1STR7
Uniprot:F1STR7
Length = 260
Score = 156 (60.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 59/199 (29%), Positives = 93/199 (46%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL----- 145
CQE +L + ++R L F L +DQ LL+ W LFLL LAQ + +++
Sbjct: 59 CQEAL-NVLAKTLAFLRNLPSFCQLPPQDQRQLLRGCWGPLFLLGLAQDIVTFEVAEVPV 117
Query: 146 -SLL--INCEK----ARERLPPDDVRVN-NEIKLIQEILARFRQLSPDGSECGCMKAVIL 197
S+L I E+ A P D + + ++ +Q L L E +K IL
Sbjct: 118 PSILKKILLEEPSSGAGSGQPLDRPQPSLAAVQWLQCCLESLWSLELGPKEYAYLKGTIL 177
Query: 198 FTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIER 257
F P+ PGL + + LQ +A L + + +R R+LL +L+++ + +
Sbjct: 178 FNPDVPGLYASSHIGHLQHEAHQALWEVLEPWCPAGQSRLARVLLAASTLKSIPPTLLGD 237
Query: 258 LFFKETIGDIPIQRLLGDM 276
LFF+ IGD+ I LL DM
Sbjct: 238 LFFRPVIGDVDIVGLLEDM 256
>FB|FBgn0003651 [details] [associations]
symbol:svp "seven up" species:7227 "Drosophila melanogaster"
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0007503 "fat body development" evidence=TAS] [GO:0061331
"epithelial cell proliferation involved in Malpighian tubule
morphogenesis" evidence=IMP] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048749
"compound eye development" evidence=NAS] [GO:0004872 "receptor
activity" evidence=NAS;TAS] [GO:0001752 "compound eye photoreceptor
fate commitment" evidence=TAS] [GO:0007465 "R7 cell fate
commitment" evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=TAS] [GO:0007462 "R1/R6 cell fate commitment"
evidence=TAS] [GO:0007510 "cardioblast cell fate determination"
evidence=IGI;IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007507
"heart development" evidence=NAS;TAS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=NAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0042331 "phototaxis"
evidence=IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0046530
"photoreceptor cell differentiation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0007601 UniGene:Dm.20676 GeneID:41491
KEGG:dme:Dmel_CG11502 CTD:41491 FlyBase:FBgn0003651
GeneTree:ENSGT00670000097509 KO:K14032 GenomeRNAi:41491
NextBio:824138 GermOnline:CG11502 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 GO:GO:0007510
GO:GO:0061331 GO:GO:0007503 GO:GO:0007270 GO:GO:0042331
GO:GO:0007462 GO:GO:0007464 GO:GO:0007465 GO:GO:0007419
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:M28864
PIR:B32693 RefSeq:NP_731681.1 ProteinModelPortal:P16376 SMR:P16376
STRING:P16376 EnsemblMetazoa:FBtr0082563 InParanoid:P16376
PhylomeDB:P16376 Bgee:P16376 Uniprot:P16376
Length = 746
Score = 169 (64.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 46/143 (32%), Positives = 73/143 (51%)
Query: 85 LMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWD 144
+M + E ARLLF AV W + + F L DQ+ LL+ W ELF+L+ +Q S+P
Sbjct: 335 IMGIDNICELAARLLFSAVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLH 394
Query: 145 LSLLINCEKARERLPPDD--VRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPET 202
++ L+ D V + I++ QE + + + L D +E C+KA++LFT T
Sbjct: 395 VAPLLAAAGLHASPMAADRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFT--T 452
Query: 203 PGLVDA--QPVEMLQDQAQCILG 223
L+D + V L + +LG
Sbjct: 453 GKLLDILYKDVPALLTKVSALLG 475
Score = 38 (18.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 26 NPHHSPDLLP---PNG---ISSVKIPPT 47
NP H D+LP +G ++S+K PT
Sbjct: 140 NPGHGSDMLPLIKGHGQDMLTSIKGQPT 167
>ZFIN|ZDB-GENE-990415-68 [details] [associations]
symbol:esrra "estrogen-related receptor alpha"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-68
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0042074 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OMA:PLPFPGS GeneTree:ENSGT00700000104391 HSSP:P20393 EMBL:BX465841
EMBL:AY556395 IPI:IPI00482428 RefSeq:NP_998120.1 UniGene:Dr.30382
SMR:Q6Q6F6 Ensembl:ENSDART00000100658 GeneID:405891 KEGG:dre:405891
InParanoid:Q6Q6F6 NextBio:20817852 Uniprot:Q6Q6F6
Length = 436
Score = 160 (61.4 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 53/194 (27%), Positives = 94/194 (48%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + + W + + F +LS DQ+ +LQ W E+ +L +A S+ + ++ A +
Sbjct: 249 RELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAYRSLGCEDEVVF----AED 304
Query: 157 RLPPDDV-RVNNEIKL---IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVE 212
+ +++ RV +L I ++ RFR L D E +KA+ L ++ + D + V+
Sbjct: 305 FVLDEEMSRVAGLTELNAAISQLARRFRALQLDREEFVMLKAIALTNSDSVYIEDMEAVQ 364
Query: 213 MLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L+D L + R P R GRLLL LP LR + + +T G +P+ +L
Sbjct: 365 KLRDLLHQALLELEVQRRPDDPQRAGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPMHKL 424
Query: 273 LGDMYTMEKSYETP 286
+M +E ++P
Sbjct: 425 FLEM--LEAMMDSP 436
>UNIPROTKB|P79386 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9823 "Sus scrofa" [GO:0016020 "membrane" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
[GO:0032448 "DNA hairpin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0042788
"polysomal ribosome" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008406 "gonad
development" evidence=ISS] [GO:0006694 "steroid biosynthetic
process" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0035258 "steroid hormone receptor
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0008104 "protein localization" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0019904 GO:GO:0003714 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0006950 GO:GO:0016020 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0008584 GO:GO:0000122
GO:GO:0043433 GO:GO:0033144 GO:GO:0060008 GO:GO:0030238
GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 CTD:190 eggNOG:NOG238310
HOGENOM:HOG000231151 KO:K08562 OrthoDB:EOG48D0V9 EMBL:U82466
EMBL:AF035816 EMBL:AF019044 RefSeq:NP_999552.1 UniGene:Ssc.14500
ProteinModelPortal:P79386 STRING:P79386 GeneID:397680
KEGG:ssc:397680 Uniprot:P79386
Length = 471
Score = 125 (49.1 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 168 EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVR 227
E++ I+ LA+ L E +K +LF P+ PGL + ++ LQ Q IL +++R
Sbjct: 358 EVQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLQCVKYIQGLQWGTQQILSEHIR 417
Query: 228 GRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+ RF L L LR + + + LFF+ IG + + ++ +M
Sbjct: 418 MTHRGYQARFAELNSALFLLRFINANVLAELFFRPIIGTVSMDDMMLEM 466
Score = 82 (33.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL + ++ LQ Q IL +++R + RF L L LR + + + LFF
Sbjct: 391 DLPGLQCVKYIQGLQWGTQQILSEHIRMTHRGYQARFAELNSALFLLRFINANVLAELFF 450
Query: 344 KETIGDIPIQRLLGDM 359
+ IG + + ++ +M
Sbjct: 451 RPIIGTVSMDDMMLEM 466
Score = 79 (32.9 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRSCWAPLLMLELAQ 301
>UNIPROTKB|F1SPV3 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9823 "Sus scrofa" [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0035258 "steroid hormone receptor binding" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0033144
"negative regulation of intracellular steroid hormone receptor
signaling pathway" evidence=IEA] [GO:0032448 "DNA hairpin binding"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030238 "male sex determination" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 OMA:CCFCGED
GeneTree:ENSGT00390000015719 EMBL:CU481468
ProteinModelPortal:F1SPV3 Ensembl:ENSSSCT00000013344 Uniprot:F1SPV3
Length = 472
Score = 125 (49.1 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 168 EIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVR 227
E++ I+ LA+ L E +K +LF P+ PGL + ++ LQ Q IL +++R
Sbjct: 359 EVQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLQCVKYIQGLQWGTQQILSEHIR 418
Query: 228 GRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+ RF L L LR + + + LFF+ IG + + ++ +M
Sbjct: 419 MTHRGYQARFAELNSALFLLRFINANVLAELFFRPIIGTVSMDDMMLEM 467
Score = 82 (33.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL + ++ LQ Q IL +++R + RF L L LR + + + LFF
Sbjct: 392 DLPGLQCVKYIQGLQWGTQQILSEHIRMTHRGYQARFAELNSALFLLRFINANVLAELFF 451
Query: 344 KETIGDIPIQRLLGDM 359
+ IG + + ++ +M
Sbjct: 452 RPIIGTVSMDDMMLEM 467
Score = 79 (32.9 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 256 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRSCWAPLLMLELAQ 302
>UNIPROTKB|Q6QMY5 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AY533243 RefSeq:NP_001002936.1 UniGene:Cfa.3916
HSSP:P11474 ProteinModelPortal:Q6QMY5 SMR:Q6QMY5 STRING:Q6QMY5
GeneID:403169 KEGG:cfa:403169 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 InParanoid:Q6QMY5 KO:K08552
OrthoDB:EOG48KRBN NextBio:20816913 Uniprot:Q6QMY5
Length = 422
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 233 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 292
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ ++ +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 293 EEGARAAGLGELGAVLLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 352
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 353 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 412
Query: 273 LGDM 276
+M
Sbjct: 413 FLEM 416
>MGI|MGI:1346831 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030278 "regulation of ossification" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346831
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 CTD:2101 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN OMA:PLPFPGS
EMBL:U85259 EMBL:AK156371 EMBL:BC138586 EMBL:BC171958
IPI:IPI00762735 RefSeq:NP_031979.2 UniGene:Mm.386776
ProteinModelPortal:O08580 SMR:O08580 IntAct:O08580 STRING:O08580
PhosphoSite:O08580 PRIDE:O08580 Ensembl:ENSMUST00000025906
GeneID:26379 KEGG:mmu:26379 GeneTree:ENSGT00700000104391
InParanoid:B2RRU9 ChEMBL:CHEMBL1914280 NextBio:304289 Bgee:O08580
CleanEx:MM_ESRRA Genevestigator:O08580
GermOnline:ENSMUSG00000024955 Uniprot:O08580
Length = 422
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 233 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 292
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 293 EEGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 352
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 353 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 412
Query: 273 LGDM 276
+M
Sbjct: 413 FLEM 416
>RGD|1583866 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030278 "regulation of ossification"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:1583866 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 HSSP:P11474 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN
OMA:PLPFPGS GeneTree:ENSGT00700000104391 EMBL:AY280663
EMBL:BC104701 IPI:IPI00371457 RefSeq:NP_001008511.2
UniGene:Rn.130171 ProteinModelPortal:Q5QJV7 SMR:Q5QJV7
STRING:Q5QJV7 PhosphoSite:Q5QJV7 PRIDE:Q5QJV7
Ensembl:ENSRNOT00000028697 GeneID:293701 KEGG:rno:293701
UCSC:RGD:1583866 InParanoid:Q5QJV7 NextBio:636801
Genevestigator:Q5QJV7 Uniprot:Q5QJV7
Length = 422
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 233 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 292
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 293 EEGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 352
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 353 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 412
Query: 273 LGDM 276
+M
Sbjct: 413 FLEM 416
>UNIPROTKB|F1MBX3 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 CTD:2101 KO:K08552 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:DAAA02063533 IPI:IPI00695134
RefSeq:NP_001178302.1 UniGene:Bt.15797 PRIDE:F1MBX3
Ensembl:ENSBTAT00000036417 GeneID:507834 KEGG:bta:507834
NextBio:20868240 Uniprot:F1MBX3
Length = 422
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 233 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 292
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 293 EEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 352
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 353 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 412
Query: 273 LGDM 276
+M
Sbjct: 413 FLEM 416
>UNIPROTKB|F1RQP2 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:FP312658
Ensembl:ENSSSCT00000014241 Uniprot:F1RQP2
Length = 422
Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 233 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 292
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 293 EEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 352
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 353 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 412
Query: 273 LGDM 276
+M
Sbjct: 413 FLEM 416
>UNIPROTKB|P11474 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IEA]
[GO:0045670 "regulation of osteoclast differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042127
GO:GO:0051216 GO:GO:0045670 GO:GO:0006367 GO:GO:0045667 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OrthoDB:EOG48KRBN EMBL:X51416 EMBL:L38487 EMBL:AP001453
IPI:IPI00005717 IPI:IPI00792208 PIR:A29345 RefSeq:NP_004442.3
UniGene:Hs.110849 PDB:1XB7 PDB:2PJL PDB:3D24 PDB:3K6P PDBsum:1XB7
PDBsum:2PJL PDBsum:3D24 PDBsum:3K6P ProteinModelPortal:P11474
SMR:P11474 DIP:DIP-35053N IntAct:P11474 MINT:MINT-215609
STRING:P11474 PhosphoSite:P11474 DMDM:215274146 PaxDb:P11474
PRIDE:P11474 DNASU:2101 Ensembl:ENST00000000442
Ensembl:ENST00000405666 Ensembl:ENST00000406310 GeneID:2101
KEGG:hsa:2101 UCSC:uc001nzq.1 UCSC:uc001nzr.1 GeneCards:GC11P064073
HGNC:HGNC:3471 MIM:601998 neXtProt:NX_P11474 PharmGKB:PA27887
OMA:PLPFPGS BindingDB:P11474 ChEMBL:CHEMBL3429
EvolutionaryTrace:P11474 GenomeRNAi:2101 NextBio:8503
ArrayExpress:P11474 Bgee:P11474 CleanEx:HS_ESRRA
Genevestigator:P11474 GermOnline:ENSG00000173153 Uniprot:P11474
Length = 423
Score = 155 (59.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 234 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 293
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 294 EEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 353
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 354 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 413
Query: 273 LGDM 276
+M
Sbjct: 414 FLEM 417
>ZFIN|ZDB-GENE-040616-3 [details] [associations]
symbol:esrrd "estrogen-related receptor delta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-3 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104391 EMBL:CABZ01076181
EMBL:CABZ01076182 IPI:IPI00898096 Ensembl:ENSDART00000125432
Bgee:F1Q8K8 Uniprot:F1Q8K8
Length = 431
Score = 154 (59.3 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 52/197 (26%), Positives = 89/197 (45%)
Query: 82 LQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSI 141
L+ LM+ C LL M + W + + F LS DQ+ LLQ W E LL++A W
Sbjct: 235 LKTLMTL--CDLLNRELLVM-IGWAKHIPGFCALSLLDQMALLQSGWMETLLLNVA-WRS 290
Query: 142 PWDLSLLINCEKAR-ERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP 200
L E R +++ ++ + R++Q+S E +KA+ L
Sbjct: 291 QALAEELQFAENLRLNESQSQAAGLHDLYTALRHLTCRYQQMSLKQEEFIILKAMALANS 350
Query: 201 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 260
+ + A+ V+ QD L ++ ++ + R GR+L+ LP LR ++ R F
Sbjct: 351 DAENVEGAEAVQCFQDALHEALQEFEISQHPSEAHRAGRMLMTLPLLRQTANRSV-RCFR 409
Query: 261 K-ETIGDIPIQRLLGDM 276
+ T G +P+ +L +M
Sbjct: 410 RLHTDGHVPMHKLFLEM 426
>UNIPROTKB|Q9BG94 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9483 "Callithrix jacchus" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 EMBL:AF322895 ProteinModelPortal:Q9BG94
HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258 InterPro:IPR025900
Pfam:PF14046 Uniprot:Q9BG94
Length = 470
Score = 119 (46.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 159 PPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
PP + R ++++ I+ L++ L+ E +K +LF P+ PGL + ++ LQ
Sbjct: 345 PPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGLQCVKYIQGLQ 404
Query: 216 DQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
Q IL +++R + RF L L LR + + I LFF+ IG + + ++ +
Sbjct: 405 WGTQQILSEHIRMTHRGHHDRFIELNSALFLLRFINANVIAELFFRPIIGTVSMDDMMLE 464
Query: 276 M 276
M
Sbjct: 465 M 465
Score = 80 (33.2 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 22/76 (28%), Positives = 38/76 (50%)
Query: 284 ETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFF 343
+ PGL + ++ LQ Q IL +++R + RF L L LR + + I LFF
Sbjct: 390 DVPGLQCVKYIQGLQWGTQQILSEHIRMTHRGHHDRFIELNSALFLLRFINANVIAELFF 449
Query: 344 KETIGDIPIQRLLGDM 359
+ IG + + ++ +M
Sbjct: 450 RPIIGTVSMDDMMLEM 465
Score = 79 (32.9 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNCWAPLLMLELAQ 301
>FB|FBgn0261239 [details] [associations]
symbol:Hr39 "Hormone receptor-like in 39" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003712 "transcription cofactor activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0016321 "female meiosis
chromosome segregation" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0035072 "ecdysone-mediated induction of salivary gland cell
autophagic cell death" evidence=IMP] [GO:0035211 "spermathecum
morphogenesis" evidence=IMP] [GO:0060968 "regulation of gene
silencing" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014134 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0000978 GO:GO:0006919 GO:GO:0016321
GO:GO:0035072 GO:GO:0060968 EMBL:L06423 EMBL:L07551 EMBL:L07549
EMBL:L07550 EMBL:AY069676 PIR:S33708 PIR:S33709 RefSeq:NP_476932.1
RefSeq:NP_476933.1 RefSeq:NP_599123.1 RefSeq:NP_724322.1
UniGene:Dm.4837 ProteinModelPortal:Q05192 SMR:Q05192 IntAct:Q05192
MINT:MINT-807520 STRING:Q05192 EnsemblMetazoa:FBtr0081479
EnsemblMetazoa:FBtr0081480 EnsemblMetazoa:FBtr0081481 GeneID:35398
KEGG:dme:Dmel_CG8676 CTD:35398 FlyBase:FBgn0261239 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InParanoid:Q05192 KO:K08705
OMA:YTLAHYP OrthoDB:EOG4P8D09 PhylomeDB:Q05192 GenomeRNAi:35398
NextBio:793317 Bgee:Q05192 GermOnline:CG8676 GO:GO:0035211
Uniprot:Q05192
Length = 808
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 55/181 (30%), Positives = 78/181 (43%)
Query: 88 AEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSL 147
A C RL + V+W + L F+ +S DQ+ LL SW EL L SI D
Sbjct: 618 AHLCNVADHRL-YKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSI--DTPG 674
Query: 148 LINCEKARERLPPDDVRVNNEIKLIQEILA---RFRQLSPDGSECGCMKAVILFTPETPG 204
I + R ++ + N I+ +L R+L D E MK ++L +T
Sbjct: 675 EIKMSQGR-KITLSQAKSNGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTE 733
Query: 205 LVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETI 264
L +A V Q++A L Y Y P++FG LLL +P L+ Q E L K
Sbjct: 734 LQEAVKVRECQEKALQSLQAYTLAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKTRD 793
Query: 265 G 265
G
Sbjct: 794 G 794
>UNIPROTKB|F1PFF7 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:AAEX03011644
Ensembl:ENSCAFT00000022969 Uniprot:F1PFF7
Length = 613
Score = 155 (59.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 46/184 (25%), Positives = 84/184 (45%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R + + + W + + F +LS DQ+ +LQ W E+ +L +AQ S+P L + +
Sbjct: 424 REIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLD 483
Query: 157 RLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQD 216
+ + +++ R + L + E +KA+ L ++ + DA+ VE L++
Sbjct: 484 EEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE 543
Query: 217 QAQCILGDYVRGRYS----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRL 272
L +Y GR + R GRLLL LP LR + + + G +P+ +L
Sbjct: 544 ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKL 603
Query: 273 LGDM 276
+M
Sbjct: 604 FLEM 607
>UNIPROTKB|P51843 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0045596 "negative regulation of
cell differentiation" evidence=IEA] [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0021854 "hypothalamus development" evidence=NAS]
[GO:0021983 "pituitary gland development" evidence=NAS] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0008584 "male
gonad development" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0050682
"AF-2 domain binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=IDA] [GO:0035258 "steroid hormone receptor binding"
evidence=IPI] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA;NAS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0042788 "polysomal ribosome" evidence=IDA] [GO:0032448 "DNA
hairpin binding" evidence=IDA] [GO:0006694 "steroid biosynthetic
process" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
[GO:0030325 "adrenal gland development" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0030522
"intracellular receptor mediated signaling pathway"
evidence=NAS;IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0008104 GO:GO:0006950
GO:GO:0016020 GO:GO:0006694 GO:GO:0030325 GO:GO:0033327
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0043434 GO:GO:0007283 GO:GO:0003723
GO:GO:0042788 GO:GO:0008584 GO:GO:0000122 GO:GO:0003690
GO:GO:0043433 DrugBank:DB00755 GO:GO:0021983
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367 DrugBank:DB01234
GO:GO:0021854 GO:GO:0033144 GO:GO:0060008 Orphanet:242
GO:GO:0030238 GO:GO:0045596 Orphanet:251510 HOVERGEN:HBG005453
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 EMBL:S74720
EMBL:U31929 EMBL:BC011564 IPI:IPI00020943 IPI:IPI00646717
PIR:S50854 RefSeq:NP_000466.2 UniGene:Hs.268490
ProteinModelPortal:P51843 SMR:P51843 IntAct:P51843
MINT:MINT-2855705 STRING:P51843 PhosphoSite:P51843 DMDM:20532385
PaxDb:P51843 PRIDE:P51843 DNASU:190 Ensembl:ENST00000378970
Ensembl:ENST00000453287 GeneID:190 KEGG:hsa:190 UCSC:uc004dcf.4
CTD:190 GeneCards:GC0XM030322 HGNC:HGNC:7960 MIM:300018 MIM:300200
MIM:300473 neXtProt:NX_P51843 Orphanet:95702 PharmGKB:PA31746
eggNOG:NOG238310 HOGENOM:HOG000231151 InParanoid:P51843 KO:K08562
OMA:CCFCGED OrthoDB:EOG48D0V9 PhylomeDB:P51843 ChEMBL:CHEMBL1795094
GenomeRNAi:190 NextBio:776 ArrayExpress:P51843 Bgee:P51843
CleanEx:HS_NR0B1 Genevestigator:P51843 GermOnline:ENSG00000169297
Uniprot:P51843
Length = 470
Score = 116 (45.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 159 PPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
PP + R ++++ I+ L++ L+ E +K +LF P+ PGL + ++ LQ
Sbjct: 345 PPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGLQCVKYIQGLQ 404
Query: 216 DQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
Q IL ++ R + RF L L LR + + I LFF+ IG + + ++ +
Sbjct: 405 WGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRPIIGTVSMDDMMLE 464
Query: 276 M 276
M
Sbjct: 465 M 465
Score = 80 (33.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNCWASLLMLELAQ 301
>UNIPROTKB|Q9BG93 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9544 "Macaca mulatta" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 OrthoDB:EOG48D0V9 EMBL:AF322896
UniGene:Mmu.3542 ProteinModelPortal:Q9BG93 STRING:Q9BG93
InParanoid:Q9BG93 Uniprot:Q9BG93
Length = 470
Score = 116 (45.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 159 PPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
PP + R ++++ I+ L++ L+ E +K +LF P+ PGL + ++ LQ
Sbjct: 345 PPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGLQCVKYIQGLQ 404
Query: 216 DQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
Q IL ++ R + RF L L LR + + I LFF+ IG + + ++ +
Sbjct: 405 WGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRPIIGTVSMDDMMLE 464
Query: 276 M 276
M
Sbjct: 465 M 465
Score = 80 (33.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNCWASLLMLELAQ 301
>UNIPROTKB|Q9BG97 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9598 "Pan troglodytes" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 OrthoDB:EOG48D0V9 EMBL:AF322892
UniGene:Ptr.6300 ProteinModelPortal:Q9BG97 STRING:Q9BG97
InParanoid:Q9BG97 Uniprot:Q9BG97
Length = 470
Score = 116 (45.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 33/121 (27%), Positives = 59/121 (48%)
Query: 159 PPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
PP + R ++++ I+ L++ L+ E +K +LF P+ PGL + ++ LQ
Sbjct: 345 PPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDVPGLQCVKYIQGLQ 404
Query: 216 DQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
Q IL ++ R + RF L L LR + + I LFF+ IG + + ++ +
Sbjct: 405 WGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRPIIGTVSMDDMMLE 464
Query: 276 M 276
M
Sbjct: 465 M 465
Score = 80 (33.2 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNCWASLLMLELAQ 301
>UNIPROTKB|H0YGT3 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:AP001453 HGNC:HGNC:3471 Ensembl:ENST00000545035 Uniprot:H0YGT3
Length = 198
Score = 138 (53.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/169 (26%), Positives = 77/169 (45%)
Query: 112 FQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVRVNNEIKL 171
F +LS DQ+ +LQ W E+ +L +AQ S+P L + + +
Sbjct: 30 FSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAA 89
Query: 172 IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYS 231
+ +++ R + L + E +KA+ L ++ + DA+ VE L++ L +Y GR
Sbjct: 90 LLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREALHEALLEYEAGRAG 149
Query: 232 ----RQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+ R GRLLL LP LR + + + G +P+ +L +M
Sbjct: 150 PGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEM 198
>MGI|MGI:1346833 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member
1" species:10090 "Mus musculus" [GO:0001553 "luteinization"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IGI;IMP] [GO:0009888 "tissue development"
evidence=IMP] [GO:0010259 "multicellular organismal aging"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0022414 "reproductive process" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IGI] [GO:0030325 "adrenal gland
development" evidence=IGI;IMP] [GO:0042445 "hormone metabolic
process" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO;IMP] [GO:2000195 "negative
regulation of female gonad development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346833 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0005543 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0008584 GO:GO:0003690
GO:GO:0042445 GO:GO:0051457 GO:GO:0010259 GO:GO:0001553
GO:GO:2000020 GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
PDB:1YMT PDBsum:1YMT PDB:1YP0 PDBsum:1YP0 HOVERGEN:HBG106677
EMBL:AL844842 PDB:3F7D PDBsum:3F7D CTD:2516 KO:K08560 OMA:PFGLMCK
OrthoDB:EOG4FJ891 EMBL:D10584 EMBL:S65878 EMBL:S65875 EMBL:S65919
EMBL:S65876 EMBL:S65877 EMBL:AF511594 EMBL:AK134378 EMBL:AK144376
EMBL:BC110476 EMBL:BC110477 IPI:IPI00107985 IPI:IPI00330060
PIR:A40716 PIR:A42128 RefSeq:NP_620639.1 UniGene:Mm.31387 PDB:2FF0
PDBsum:2FF0 ProteinModelPortal:P33242 SMR:P33242 STRING:P33242
PhosphoSite:P33242 PRIDE:P33242 Ensembl:ENSMUST00000028084
Ensembl:ENSMUST00000112883 GeneID:26423 KEGG:mmu:26423
InParanoid:Q812G5 ChEMBL:CHEMBL1764943 EvolutionaryTrace:P33242
NextBio:304449 Bgee:P33242 CleanEx:MM_NR5A1 Genevestigator:P33242
GermOnline:ENSMUSG00000026751 Uniprot:P33242
Length = 462
Score = 152 (58.6 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 51/179 (28%), Positives = 81/179 (45%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL +L H+ Q+ + L+ E +
Sbjct: 278 VDWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVELSTV 337
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 338 AVQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEK 397
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 398 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 456
Score = 39 (18.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 24 PHNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
P P PD + P + + + V PPSG
Sbjct: 129 PPPPPPPPDYMLPPSLHAPEPKALVSGPPSG 159
>RGD|68350 [details] [associations]
symbol:Nr5a1 "nuclear receptor subfamily 5, group A, member 1"
species:10116 "Rattus norvegicus" [GO:0001553 "luteinization"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005543 "phospholipid binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA;ISO] [GO:0008585
"female gonad development" evidence=IEP] [GO:0009888 "tissue
development" evidence=IEA;ISO] [GO:0010259 "multicellular organismal
aging" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IEA;ISO] [GO:0022414 "reproductive process" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IEA;ISO] [GO:0030325
"adrenal gland development" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=NAS]
[GO:0042445 "hormone metabolic process" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051457
"maintenance of protein location in nucleus" evidence=IEA;ISO]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA;ISO] [GO:2000195 "negative regulation of female gonad
development" evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:68350 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325 GO:GO:0008585
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003690 GO:GO:0051457 GO:GO:0001553
GO:GO:0009888 GO:GO:2000195 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 EMBL:D42156 IPI:IPI00199452 PIR:A56120
RefSeq:NP_001178028.1 UniGene:Rn.229378 ProteinModelPortal:P50569
SMR:P50569 STRING:P50569 PhosphoSite:P50569 PRIDE:P50569
Ensembl:ENSRNOT00000017651 GeneID:83826 KEGG:rno:83826
UCSC:RGD:68350 InParanoid:P50569 NextBio:616450 ArrayExpress:P50569
Genevestigator:P50569 GermOnline:ENSRNOG00000012682 Uniprot:P50569
Length = 462
Score = 152 (58.6 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 51/179 (28%), Positives = 81/179 (45%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL +L H+ Q+ + L+ E +
Sbjct: 278 VDWARRCMVFKELEVADQMTLLQNCWSELLVLDHIYRQVQYGKEDSILLVTGQEVELSTV 337
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 338 AVQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEK 397
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 398 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 456
Score = 39 (18.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 24 PHNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
P P PD + P + + + V PPSG
Sbjct: 129 PPPPPPPPDYMLPPSLHAPEPKALVSGPPSG 159
>ZFIN|ZDB-GENE-080403-9 [details] [associations]
symbol:nr0b2b "nuclear receptor subfamily 0, group B,
member 2b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR008946 Pfam:PF00104
SMART:SM00430 ZFIN:ZDB-GENE-080403-9 GO:GO:0005634 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00390000015719 EMBL:CU905504 IPI:IPI00501722
ProteinModelPortal:F1R2J5 Ensembl:ENSDART00000011128 Uniprot:F1R2J5
Length = 241
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 48/189 (25%), Positives = 92/189 (48%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDL------SLLIN 150
++L ++ +++ Q LS ++L LLQ+ W LF+L LAQ +I +++ S+L N
Sbjct: 46 QVLTKSIHFMQSSLSHQNLSSSERLCLLQKRWVPLFILGLAQENISFEVMDFPVGSILRN 105
Query: 151 CEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTP--ETPGLVDA 208
+ ++ P D ++ ++ L + L E C+K ILF+ ++PGL +
Sbjct: 106 ILLSGQQKPDDCPLTLAKVNKLKMFLDKVWSLQLSLKEYACLKGAILFSQVLDSPGLKSS 165
Query: 209 QPVEMLQDQAQCILGDYVRGRY-SRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDI 267
+ LQ++ L + R S + +L +L+ +S + LFF+ +G +
Sbjct: 166 LVIAGLQEEFAHDLHMLILSRQRSEEHWTIMDVLFTACTLQMEARSMVTELFFRPIMGKM 225
Query: 268 PIQRLLGDM 276
IQ LL ++
Sbjct: 226 DIQELLNEI 234
>MGI|MGI:1352460 [details] [associations]
symbol:Nr0b1 "nuclear receptor subfamily 0, group B, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO;IGI] [GO:0003723 "RNA binding" evidence=ISO;IDA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007530 "sex
determination" evidence=IGI] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008406 "gonad development" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO;IMP] [GO:0016020
"membrane" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IGI] [GO:0030238 "male sex determination"
evidence=IGI;IMP] [GO:0030325 "adrenal gland development"
evidence=ISO;IGI] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0032448 "DNA hairpin binding"
evidence=ISO] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=ISO]
[GO:0033327 "Leydig cell differentiation" evidence=IMP] [GO:0035258
"steroid hormone receptor binding" evidence=ISO] [GO:0042788
"polysomal ribosome" evidence=ISO;IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0050682 "AF-2
domain binding" evidence=ISO] [GO:0060008 "Sertoli cell
differentiation" evidence=IMP] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 MGI:MGI:1352460 GO:GO:0005634 GO:GO:0003714
GO:GO:0008104 GO:GO:0006950 GO:GO:0006694 GO:GO:0030325
GO:GO:0033327 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0043434 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0003690
GO:GO:0043433 GO:GO:0033144 GO:GO:0060008 GO:GO:0030238
GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448 InterPro:IPR025900
Pfam:PF14046 CTD:190 eggNOG:NOG238310 HOGENOM:HOG000231151
KO:K08562 OrthoDB:EOG48D0V9 EMBL:S83180 EMBL:S83178 EMBL:U41568
IPI:IPI00117060 PIR:JC5199 RefSeq:NP_031456.1 UniGene:Mm.5180
PDB:3F5C PDBsum:3F5C ProteinModelPortal:Q61066 SMR:Q61066
DIP:DIP-29929N IntAct:Q61066 STRING:Q61066 PhosphoSite:Q61066
PRIDE:Q61066 DNASU:11614 Ensembl:ENSMUST00000026036 GeneID:11614
KEGG:mmu:11614 GeneTree:ENSGT00390000015719 InParanoid:Q61066
EvolutionaryTrace:Q61066 NextBio:279166 Bgee:Q61066
CleanEx:MM_NR0B1 Genevestigator:Q61066
GermOnline:ENSMUSG00000025056 Uniprot:Q61066
Length = 472
Score = 113 (44.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 169 IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRG 228
++ I+ + L+ D E +K +LF P+ PGL + +E LQ + Q IL +++R
Sbjct: 360 VQAIKSFFFKCWSLNIDTKEYAYLKGTVLFNPDLPGLQCVKYIEGLQWRTQQILTEHIRM 419
Query: 229 RYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
R L L LR + + LFF+ IG + + ++ +M
Sbjct: 420 MQREYQIRSAELNSALFLLRFINSDVVTELFFRPIIGAVSMDDMMLEM 467
Score = 81 (33.6 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 79 PGLLQILMSAEK---CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLH 135
PG+ +++ + C+ +A LL +R+V+ L FQ L QL+L++ W L +L
Sbjct: 242 PGVQRLITLKDPQVVCEAASAGLL-KTLRFVKYLPCFQILPLDQQLVLVRSCWAPLLMLE 300
Query: 136 LAQWSIPWDLSLLINCEKARERL 158
LAQ + +++ + +E L
Sbjct: 301 LAQDHLHFEMMEIPETNTTQEML 323
>UNIPROTKB|Q5T6F7 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:AL137846 HOGENOM:HOG000063718 HOVERGEN:HBG106677 EMBL:AL354979
UniGene:Hs.495108 HGNC:HGNC:7983 SMR:Q5T6F7 Ensembl:ENST00000373587
Uniprot:Q5T6F7
Length = 245
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL + H+ Q + L+ E +
Sbjct: 61 VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTV 120
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 121 ATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEK 180
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 181 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 239
>RGD|62028 [details] [associations]
symbol:Nr0b1 "nuclear receptor subfamily 0, group B, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IMP] [GO:0003677 "DNA binding"
evidence=ISO;ISS;TAS] [GO:0003690 "double-stranded DNA binding"
evidence=IMP] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0003723 "RNA binding" evidence=IEA;ISO;ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA;ISO;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISO;ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006694 "steroid biosynthetic
process" evidence=IEA;ISO;ISS] [GO:0006950 "response to stress"
evidence=IEA;ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO;IEP] [GO:0007530 "sex determination" evidence=ISO]
[GO:0008104 "protein localization" evidence=IEA;ISO] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008406 "gonad
development" evidence=ISO;ISS] [GO:0008584 "male gonad development"
evidence=ISO] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0016020 "membrane" evidence=IEA;ISO] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030238 "male sex determination"
evidence=IEA;ISO] [GO:0030325 "adrenal gland development"
evidence=IEA;ISO;ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO;ISS] [GO:0032448 "DNA hairpin
binding" evidence=IEA;ISO;ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=IEA;ISO] [GO:0033327 "Leydig cell differentiation"
evidence=IEA;ISO] [GO:0035258 "steroid hormone receptor binding"
evidence=IEA;ISO] [GO:0042788 "polysomal ribosome"
evidence=IEA;ISO;ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO;IMP] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;ISS;IMP] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0050682 "AF-2
domain binding" evidence=IEA;ISO] [GO:0050810 "regulation of steroid
biosynthetic process" evidence=TAS] [GO:0060008 "Sertoli cell
differentiation" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 RGD:62028 GO:GO:0005634 GO:GO:0003714 GO:GO:0008104
GO:GO:0006950 GO:GO:0008406 GO:GO:0006694 GO:GO:0030325
GO:GO:0033327 GO:GO:0050810 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0007283 GO:GO:0003723 GO:GO:0042788 GO:GO:0000122
GO:GO:0003690 GO:GO:0043433 GO:GO:0033144 GO:GO:0060008
GO:GO:0030238 GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448
InterPro:IPR025900 Pfam:PF14046 CTD:190 eggNOG:NOG238310
HOGENOM:HOG000231151 KO:K08562 OrthoDB:EOG48D0V9 EMBL:X99470
IPI:IPI00189565 RefSeq:NP_445769.1 UniGene:Rn.10596
ProteinModelPortal:P70503 STRING:P70503 PhosphoSite:P70503
PRIDE:P70503 GeneID:58850 KEGG:rno:58850 InParanoid:P70503
NextBio:611427 Genevestigator:P70503 GermOnline:ENSRNOG00000003765
Uniprot:P70503
Length = 472
Score = 113 (44.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 169 IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRG 228
++ I+ + L+ D E +K +LF P+ PGL + +E LQ + Q IL +++R
Sbjct: 360 VQAIKSFFFKCWSLNIDTKEYAYLKGTVLFNPDLPGLQCVKYIESLQWRTQQILTEHIRL 419
Query: 229 RYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
R L L LR + + LFF+ IG + + ++ +M
Sbjct: 420 MQREYQIRSAELNSALFLLRFINTDVVTELFFRPIIGAVSMDDMMLEM 467
Score = 78 (32.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 257 CEAASAGLL-KTLRFVKYLPCFQILPLDQQLVLVRSCWAPLLMLELAQ 303
>UNIPROTKB|P70503 [details] [associations]
symbol:Nr0b1 "Nuclear receptor subfamily 0 group B member
1" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 RGD:62028 GO:GO:0005634 GO:GO:0003714 GO:GO:0008104
GO:GO:0006950 GO:GO:0008406 GO:GO:0006694 GO:GO:0030325
GO:GO:0033327 GO:GO:0050810 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0007283 GO:GO:0003723 GO:GO:0042788 GO:GO:0000122
GO:GO:0003690 GO:GO:0043433 GO:GO:0033144 GO:GO:0060008
GO:GO:0030238 GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448
InterPro:IPR025900 Pfam:PF14046 CTD:190 eggNOG:NOG238310
HOGENOM:HOG000231151 KO:K08562 OrthoDB:EOG48D0V9 EMBL:X99470
IPI:IPI00189565 RefSeq:NP_445769.1 UniGene:Rn.10596
ProteinModelPortal:P70503 STRING:P70503 PhosphoSite:P70503
PRIDE:P70503 GeneID:58850 KEGG:rno:58850 InParanoid:P70503
NextBio:611427 Genevestigator:P70503 GermOnline:ENSRNOG00000003765
Uniprot:P70503
Length = 472
Score = 113 (44.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 29/108 (26%), Positives = 51/108 (47%)
Query: 169 IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRG 228
++ I+ + L+ D E +K +LF P+ PGL + +E LQ + Q IL +++R
Sbjct: 360 VQAIKSFFFKCWSLNIDTKEYAYLKGTVLFNPDLPGLQCVKYIESLQWRTQQILTEHIRL 419
Query: 229 RYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
R L L LR + + LFF+ IG + + ++ +M
Sbjct: 420 MQREYQIRSAELNSALFLLRFINTDVVTELFFRPIIGAVSMDDMMLEM 467
Score = 78 (32.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 257 CEAASAGLL-KTLRFVKYLPCFQILPLDQQLVLVRSCWAPLLMLELAQ 303
>FB|FBgn0001078 [details] [associations]
symbol:ftz-f1 "ftz transcription factor 1" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0003677 "DNA binding" evidence=NAS;IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0007365 "periodic partitioning" evidence=IMP] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0035071 "salivary gland
cell autophagic cell death" evidence=NAS] [GO:0035075 "response to
ecdysone" evidence=TAS] [GO:0009725 "response to hormone stimulus"
evidence=TAS] [GO:0008219 "cell death" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0007552 "metamorphosis" evidence=IMP;TAS] [GO:0003712
"transcription cofactor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0002165 "instar larval or
pupal development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0042048 "olfactory behavior"
evidence=IMP] [GO:0035074 "pupation" evidence=IMP] [GO:0007480
"imaginal disc-derived leg morphogenesis" evidence=IMP] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0035626 "juvenile hormone mediated signaling
pathway" evidence=IMP] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 EMBL:AE014296
GO:GO:0046872 GO:GO:0008219 GO:GO:0004879 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001077 GO:GO:0042048 GO:GO:0040034 GO:GO:0000976
GO:GO:0007480 GO:GO:0035074 GO:GO:0035626 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 KO:K08705 EMBL:M63711 EMBL:M98397
EMBL:BT058016 EMBL:AY051845 PIR:A47303 PIR:T13733
RefSeq:NP_001246824.1 RefSeq:NP_524143.2 RefSeq:NP_730359.1
UniGene:Dm.995 PDB:2XHS PDBsum:2XHS ProteinModelPortal:P33244
SMR:P33244 IntAct:P33244 MINT:MINT-156933 STRING:P33244
PaxDb:P33244 EnsemblMetazoa:FBtr0075086 GeneID:40045
KEGG:dme:Dmel_CG4059 CTD:40045 FlyBase:FBgn0001078
InParanoid:P33244 OMA:SKHCAGS OrthoDB:EOG4QZ61Z PhylomeDB:P33244
GenomeRNAi:40045 NextBio:816714 Bgee:P33244 GermOnline:CG4059
GO:GO:0007365 GO:GO:0035075 Uniprot:P33244
Length = 1027
Score = 155 (59.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 51/182 (28%), Positives = 77/182 (42%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLL----HLAQWSIPWDLSLLINCEKA 154
LF V W R F+ L DQ+ LLQ SW ++ +L H +P + L N +
Sbjct: 841 LFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQL--NNGQV 898
Query: 155 RERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEML 214
+ + V E+ + + L D + CMK +IL P G+V+ + V
Sbjct: 899 FNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPSVRGIVNRKTVSEG 958
Query: 215 QDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLG 274
D Q L DY Y +F L+ +LP + A+ + L+ K G P Q LL
Sbjct: 959 HDNVQAALLDYTLTCYPSVNDKFRGLVNILPEIHAMAVRGEDHLYTKHCAGSAPTQTLLM 1018
Query: 275 DM 276
+M
Sbjct: 1019 EM 1020
Score = 41 (19.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 1 VQHERGPRKPKIHNAHHQDSKLEPHNPHHSPDLLPPNGISSVKIP 45
+QH+ ++ H Q L PH HH +L SS +P
Sbjct: 28 LQHQH--QQQHSHQQQQQQQLLMPH--HHKDQMLAAG--SSPMLP 66
Score = 38 (18.4 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 13 HNAHHQDSKLEPHNPHHSPDLLPPN 37
H+ HQ + H LL P+
Sbjct: 26 HHLQHQHQQQHSHQQQQQQQLLMPH 50
>UNIPROTKB|Q9YHZ7 [details] [associations]
symbol:esr1 "Estrogen receptor" species:7998 "Ictalurus
punctatus" [GO:0030284 "estrogen receptor activity" evidence=IDA]
[GO:0042562 "hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042562
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 GO:GO:0030284
EMBL:AF253505 EMBL:AF061275 EMBL:AF253506 RefSeq:NP_001187003.1
UniGene:Ipu.11209 ProteinModelPortal:Q9YHZ7 SMR:Q9YHZ7
GeneID:100304474 CTD:246870 Uniprot:Q9YHZ7
Length = 617
Score = 144 (55.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 54/193 (27%), Positives = 88/193 (45%)
Query: 97 RLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARE 156
R L + W + + FQ LS DQ+ LL+ SW E+ ++ L SI L+ + +
Sbjct: 357 RELVHMIAWAKKVPGFQDLSLHDQVQLLESSWLEILMIGLIWRSIYTPGKLIFAQDLILD 416
Query: 157 RLPPDDVRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
+ + V EI ++ +ARFR L E C+KA+IL + PVE L+
Sbjct: 417 KSEGECVEGMAEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSS-PVEPLR 475
Query: 216 D--QAQCILGD-------YVR--G-RYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKET 263
D QC++ + Y+ G Q R +LLL+L +R + +E L+ +
Sbjct: 476 DGFMVQCMMDNITDALIYYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYSMKC 535
Query: 264 IGDIPIQRLLGDM 276
+P+ LL +M
Sbjct: 536 KNKVPLYDLLLEM 548
Score = 47 (21.6 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 18 QDSKLEP-HNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
Q+ L+P N SP + P SS ++ P + +PP+G
Sbjct: 83 QEENLQPLPNGSSSPPVFVP---SSPQLSPFLGHPPAG 117
>UNIPROTKB|F1PHU7 [details] [associations]
symbol:NR5A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000195 "negative regulation of female gonad
development" evidence=IEA] [GO:2000020 "positive regulation of male
gonad development" evidence=IEA] [GO:0051457 "maintenance of
protein location in nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0042445 "hormone metabolic process" evidence=IEA]
[GO:0030325 "adrenal gland development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001553
"luteinization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0030154 GO:GO:0030325 GO:GO:0005543 GO:GO:0003677
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0003705 GO:GO:0008584 GO:GO:0051457
GO:GO:0001553 GO:GO:0009888 GO:GO:2000195
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:PFGLMCK EMBL:AAEX03006890 Ensembl:ENSCAFT00000032206
Uniprot:F1PHU7
Length = 384
Score = 147 (56.8 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL + H+ Q + L+ E +
Sbjct: 200 VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQIQHGKDGSILLVTGQEVEMSTV 259
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 260 AAQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEK 319
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 320 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 378
Score = 37 (18.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 24 PHNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
P P PD + P G+ + + PP+G
Sbjct: 52 PPPPPPPPDYMLPPGLHAPEPKGLASGPPAG 82
>WB|WBGene00003659 [details] [associations]
symbol:nhr-69 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
L + + W + L F L++ DQ LL+ + +L +A SI + I C L
Sbjct: 153 LVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI-CLANDTLL 211
Query: 159 PPDDVRVNNEI-----KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVE- 212
P + +I ++I EI+ R+L+ D E +KA++ F P + D PVE
Sbjct: 212 PKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFFNPVVREINDQSPVEN 271
Query: 213 ----MLQD-QAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDI 267
L+ Q +C R G+LLL+LPSL+A+ Q +E + G +
Sbjct: 272 ARYAFLRSLQRRCTDKALENMEDESMDCRSGKLLLLLPSLQAIAQQLVEDVQLARLFGLV 331
Query: 268 PIQRLLGDMYTMEKSYETPGLVD---AQPV 294
+ L+ ++ + P ++ A PV
Sbjct: 332 NVDSLMEELILNDMKPSDPQILQTSLASPV 361
>UNIPROTKB|P91829 [details] [associations]
symbol:nhr-69 "Nuclear hormone receptor family member
nhr-69" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 EMBL:Z83240
KO:K07295 EMBL:AY204178 PIR:T25211 RefSeq:NP_492615.2
UniGene:Cel.18404 ProteinModelPortal:P91829 SMR:P91829
DIP:DIP-24463N IntAct:P91829 MINT:MINT-117310 STRING:P91829
PaxDb:P91829 EnsemblMetazoa:T23H4.2 GeneID:172840
KEGG:cel:CELE_T23H4.2 UCSC:T23H4.2.1 CTD:172840 WormBase:T23H4.2
InParanoid:P91829 OMA:LEMEEAN NextBio:877225 Uniprot:P91829
Length = 373
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 99 LFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERL 158
L + + W + L F L++ DQ LL+ + +L +A SI + I C L
Sbjct: 153 LVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTI-CLANDTLL 211
Query: 159 PPDDVRVNNEI-----KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVE- 212
P + +I ++I EI+ R+L+ D E +KA++ F P + D PVE
Sbjct: 212 PKEHATQVGDINCVVGRIIDEIVNPMRRLNMDLIEYVALKAILFFNPVVREINDQSPVEN 271
Query: 213 ----MLQD-QAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDI 267
L+ Q +C R G+LLL+LPSL+A+ Q +E + G +
Sbjct: 272 ARYAFLRSLQRRCTDKALENMEDESMDCRSGKLLLLLPSLQAIAQQLVEDVQLARLFGLV 331
Query: 268 PIQRLLGDMYTMEKSYETPGLVD---AQPV 294
+ L+ ++ + P ++ A PV
Sbjct: 332 NVDSLMEELILNDMKPSDPQILQTSLASPV 361
>UNIPROTKB|Q04752 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=ISS;IMP] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003707 "steroid hormone receptor activity" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:2000195 "negative regulation of female gonad development"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:0051457 "maintenance of protein
location in nucleus" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0010259 "multicellular organismal aging"
evidence=IEA] [GO:0009888 "tissue development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001553 "luteinization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0030325
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0008584
GO:GO:0051457 GO:GO:0001553 GO:GO:0009888 GO:GO:2000195
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 HOGENOM:HOG000063718 HOVERGEN:HBG106677
EMBL:D13569 EMBL:S45997 IPI:IPI00707901 PIR:A46077
RefSeq:NP_776828.1 UniGene:Bt.7422 ProteinModelPortal:Q04752
SMR:Q04752 IntAct:Q04752 STRING:Q04752 Ensembl:ENSBTAT00000011869
GeneID:281948 KEGG:bta:281948 CTD:2516 InParanoid:Q04752 KO:K08560
OMA:PFGLMCK OrthoDB:EOG4FJ891 NextBio:20805824 Uniprot:Q04752
Length = 461
Score = 146 (56.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL + H+ Q + L+ E +
Sbjct: 277 VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQIQHGKEGSILLVTGQEVELTTV 336
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 337 AAQAGSLLHSLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKEAQEK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 397 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 455
Score = 40 (19.1 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 24 PHNPHHSPDLLPPNGISSVKIPPTVLYPPSG 54
P P PD + P+G+ + + PP+G
Sbjct: 129 PPPPPPPPDYMLPHGLHASEPKGLASGPPAG 159
>UNIPROTKB|E1C6K9 [details] [associations]
symbol:NR4A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001975 "response to amphetamine"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0021986 "habenula development"
evidence=IEA] [GO:0031668 "cellular response to extracellular
stimulus" evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0042053 "regulation of dopamine metabolic
process" evidence=IEA] [GO:0042416 "dopamine biosynthetic process"
evidence=IEA] [GO:0042551 "neuron maturation" evidence=IEA]
[GO:0043085 "positive regulation of catalytic activity"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0033554 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944
GO:GO:0001975 GO:GO:0043524 GO:GO:0042416 GO:GO:0042053
GO:GO:0016265 GO:GO:0030522 GO:GO:0043576 KO:K08558
GeneTree:ENSGT00640000091364 CTD:4929 OMA:MWEDPGS EMBL:AADN02017061
IPI:IPI00579183 RefSeq:XP_422166.2 Ensembl:ENSGALT00000020478
GeneID:424320 KEGG:gga:424320 NextBio:20826667 Uniprot:E1C6K9
Length = 598
Score = 140 (54.3 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 105 WVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVR 164
W + F L K DQ LL + ++ ELF+L LA S P + L+ RL VR
Sbjct: 420 WAEKIPGFTDLPKTDQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRL--QCVR 477
Query: 165 VNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILG 223
E I I E + + ++ D S C+ A+ + T E GL + + VE LQ++ L
Sbjct: 478 GFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLK 536
Query: 224 DYV---RGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
D+V G +R P +LL LP LR + ++R+F+ + +P ++ ++
Sbjct: 537 DHVTFNNGGLNR-PNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLF 592
Score = 50 (22.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 17 HQDSKLEPHNPHHSPDLLPPNGISSVKIPPTVLYP 51
H EP PHH D P S ++ P + +P
Sbjct: 199 HVPMNAEPAGPHHGVDGQPFAVPSPIRKQPAMAFP 233
>WB|WBGene00003639 [details] [associations]
symbol:nhr-49 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0019915
"lipid storage" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0019216 "regulation of lipid metabolic process"
evidence=IMP] [GO:0019217 "regulation of fatty acid metabolic
process" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0002119 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 GO:GO:0003700 GO:GO:0019217
GO:GO:0006351 GO:GO:0019915 GeneTree:ENSGT00690000101777 KO:K08704
EMBL:Z83235 EMBL:AF273792 EMBL:AF273793 EMBL:AF273794 EMBL:AF273795
EMBL:AF332206 PIR:T23554 RefSeq:NP_492612.1 RefSeq:NP_492613.1
RefSeq:NP_871798.1 RefSeq:NP_871799.1 ProteinModelPortal:O45666
SMR:O45666 DIP:DIP-24928N IntAct:O45666 MINT:MINT-1048977
STRING:O45666 PaxDb:O45666 PRIDE:O45666 EnsemblMetazoa:K10C3.6c.1
EnsemblMetazoa:K10C3.6c.2 GeneID:172839 KEGG:cel:CELE_K10C3.6
UCSC:K10C3.6c.1 CTD:172839 WormBase:K10C3.6a WormBase:K10C3.6b
WormBase:K10C3.6c WormBase:K10C3.6d eggNOG:NOG309154
InParanoid:O45666 OMA:MEVANYC NextBio:877215 Uniprot:O45666
Length = 501
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/211 (25%), Positives = 99/211 (46%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQE-SWKELFL 133
PP P ++ ++ + TT LL M V W + + PF LS D+++LL+ + + L L
Sbjct: 213 PPNRPCTTEVDLN--EISRTT--LLLM-VEWAKTINPFMDLSMEDKIILLKNYAPQHLIL 267
Query: 134 LHLAQWSIPWDLSLLINCEKARERLPPDD----VRVNNEI-KLIQEILARFRQLSPDGSE 188
+ + + L N R+ + + +N +++ EI+ RQL E
Sbjct: 268 MPAFRSPDTTRVCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 327
Query: 189 CGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGD---YVRGRYSRQ-PTRFGRLLLML 244
C+KA+ PE GL ++ + M++D +L ++ + PTR+G +LL+
Sbjct: 328 FVCLKALAFLHPEAKGLSNSSQI-MIRDARNRVLKALYAFILDQMPDDAPTRYGNILLLA 386
Query: 245 PSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
P+L+A+ Q IE + + G + LL +
Sbjct: 387 PALKALTQLLIENMTLTKFFGLAEVDSLLSE 417
>UNIPROTKB|O45666 [details] [associations]
symbol:nhr-49 "Nuclear hormone receptor family member
nhr-49" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0040010 GO:GO:0002119 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040011 GO:GO:0040017
GO:GO:0000003 GO:GO:0003700 GO:GO:0019217 GO:GO:0006351
GO:GO:0019915 GeneTree:ENSGT00690000101777 KO:K08704 EMBL:Z83235
EMBL:AF273792 EMBL:AF273793 EMBL:AF273794 EMBL:AF273795
EMBL:AF332206 PIR:T23554 RefSeq:NP_492612.1 RefSeq:NP_492613.1
RefSeq:NP_871798.1 RefSeq:NP_871799.1 ProteinModelPortal:O45666
SMR:O45666 DIP:DIP-24928N IntAct:O45666 MINT:MINT-1048977
STRING:O45666 PaxDb:O45666 PRIDE:O45666 EnsemblMetazoa:K10C3.6c.1
EnsemblMetazoa:K10C3.6c.2 GeneID:172839 KEGG:cel:CELE_K10C3.6
UCSC:K10C3.6c.1 CTD:172839 WormBase:K10C3.6a WormBase:K10C3.6b
WormBase:K10C3.6c WormBase:K10C3.6d eggNOG:NOG309154
InParanoid:O45666 OMA:MEVANYC NextBio:877215 Uniprot:O45666
Length = 501
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 54/211 (25%), Positives = 99/211 (46%)
Query: 75 PPPHPGLLQILMSAEKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQE-SWKELFL 133
PP P ++ ++ + TT LL M V W + + PF LS D+++LL+ + + L L
Sbjct: 213 PPNRPCTTEVDLN--EISRTT--LLLM-VEWAKTINPFMDLSMEDKIILLKNYAPQHLIL 267
Query: 134 LHLAQWSIPWDLSLLINCEKARERLPPDD----VRVNNEI-KLIQEILARFRQLSPDGSE 188
+ + + L N R+ + + +N +++ EI+ RQL E
Sbjct: 268 MPAFRSPDTTRVCLFNNTYMTRDNNTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQE 327
Query: 189 CGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGD---YVRGRYSRQ-PTRFGRLLLML 244
C+KA+ PE GL ++ + M++D +L ++ + PTR+G +LL+
Sbjct: 328 FVCLKALAFLHPEAKGLSNSSQI-MIRDARNRVLKALYAFILDQMPDDAPTRYGNILLLA 386
Query: 245 PSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
P+L+A+ Q IE + + G + LL +
Sbjct: 387 PALKALTQLLIENMTLTKFFGLAEVDSLLSE 417
>UNIPROTKB|P79387 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0008289
eggNOG:NOG240365 EMBL:AP009124 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 CTD:2516 KO:K08560
OrthoDB:EOG4FJ891 EMBL:U84399 RefSeq:NP_999344.1 UniGene:Ssc.82462
UniGene:Ssc.82473 ProteinModelPortal:P79387 SMR:P79387
STRING:P79387 GeneID:397368 KEGG:ssc:397368 Uniprot:P79387
Length = 461
Score = 143 (55.4 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL + H+ Q + L+ E +
Sbjct: 277 VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQIQHGKEGSILLVTGQEVELTTV 336
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 337 AAQAGSLLHGLVLRAQELVLQLHALQLDRQEFVCLKFLILFSLDVKFLNNHSLVKDAQEK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 397 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 455
>UNIPROTKB|Q9BG96 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9600 "Pongo pygmaeus" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 EMBL:AF322893 ProteinModelPortal:Q9BG96
STRING:Q9BG96 InParanoid:Q9BG96 Uniprot:Q9BG96
Length = 470
Score = 107 (42.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 32/121 (26%), Positives = 58/121 (47%)
Query: 159 PPDDVRV---NNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQ 215
PP + R ++++ I+ L++ L+ E +K +LF + PGL + ++ LQ
Sbjct: 345 PPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNRDVPGLQCVKYIQGLQ 404
Query: 216 DQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGD 275
Q IL ++ R + RF L L LR + + I LFF+ IG + + ++ +
Sbjct: 405 WGTQQILSEHTRMTHQGPHDRFIELNSALFLLRFINANVIAELFFRPIIGTVSMDDMMLE 464
Query: 276 M 276
M
Sbjct: 465 M 465
Score = 80 (33.2 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 91 CQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQ 138
C+ +A LL +R+V+ L FQ L QL+L++ W L +L LAQ
Sbjct: 255 CEAASAGLL-KTLRFVKYLPCFQVLPLDQQLVLVRNCWASLLMLELAQ 301
>ZFIN|ZDB-GENE-020806-5 [details] [associations]
symbol:esr1 "estrogen receptor 1" species:7955 "Danio
rerio" [GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009410 "response to xenobiotic stimulus"
evidence=IDA] [GO:0032355 "response to estradiol stimulus"
evidence=IDA] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0048920 "posterior lateral line neuromast
primordium migration" evidence=IGI;IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 Pfam:PF02159
PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-020806-5 GO:GO:0005634 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0009410 HOVERGEN:HBG108344 HOGENOM:HOG000233468 GO:GO:0030284
GO:GO:0048920 EMBL:EU079275 IPI:IPI00911410 UniGene:Dr.79999
STRING:B4XRZ3 ArrayExpress:B4XRZ3 Uniprot:B4XRZ3
Length = 621
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 55/200 (27%), Positives = 91/200 (45%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDD 162
+ W + + FQ LS DQ+ LL+ SW E+ ++ L SI L+ + +R +
Sbjct: 378 IAWAKKVPGFQDLSLHDQVQLLESSWLEVLMIGLIWRSIHSPGKLIFAQDLILDRSEGEC 437
Query: 163 VRVNNEI-KLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ--AQ 219
V EI ++ +ARFR L E C+KA+IL + PVE L D Q
Sbjct: 438 VEGMAEIFDMLLATVARFRSLKLKLEEFVCLKAIILINSGAFSFCSS-PVEPLMDNFMVQ 496
Query: 220 CILGD------YVRGRYSR----QPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPI 269
C+L + Y + Q R +LLL+L +R + +E L+ + +P+
Sbjct: 497 CMLDNITDALIYCISKSGASLQLQSRRQAQLLLLLSHIRHMSNKGMEHLYRMKCKNRVPL 556
Query: 270 QRLLGDMYTMEKSYETPGLV 289
LL +M ++ +++ G V
Sbjct: 557 YDLLLEMLDAQR-FQSSGKV 575
>UNIPROTKB|Q13285 [details] [associations]
symbol:NR5A1 "Steroidogenic factor 1" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001553 "luteinization" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0009888 "tissue development" evidence=IEA] [GO:0010259
"multicellular organismal aging" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0042445 "hormone metabolic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IEA] [GO:2000195 "negative regulation of female
gonad development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0050810 "regulation of steroid biosynthetic
process" evidence=TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0007267 "cell-cell
signaling" evidence=TAS] [GO:0007538 "primary sex determination"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005654 GO:GO:0030154 GO:GO:0030325
GO:GO:0050810 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH471090
GO:GO:0045944 GO:GO:0007267 GO:GO:0003682 GO:GO:0003705
GO:GO:0008584 GO:GO:0003713 GO:GO:0003690 GO:GO:0006367
GO:GO:0051457 Orphanet:243 Orphanet:619 GO:GO:0001553 Orphanet:242
GO:GO:2000020 GO:GO:0007538 Orphanet:168558 GO:GO:0009888
GO:GO:2000195 eggNOG:NOG240365 Orphanet:251510 EMBL:AL137846
PDB:1ZDT PDBsum:1ZDT InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 EMBL:AL354979
CleanEx:HS_SF1 CTD:2516 KO:K08560 OMA:PFGLMCK OrthoDB:EOG4FJ891
EMBL:U76388 EMBL:D88155 EMBL:BC032501 EMBL:U32592 IPI:IPI00012446
PIR:JC4972 RefSeq:NP_004950.2 UniGene:Hs.495108 PDB:1YOW
PDBsum:1YOW ProteinModelPortal:Q13285 SMR:Q13285 IntAct:Q13285
MINT:MINT-215481 STRING:Q13285 PhosphoSite:Q13285 DMDM:3121738
PRIDE:Q13285 DNASU:2516 Ensembl:ENST00000373588 GeneID:2516
KEGG:hsa:2516 UCSC:uc004boo.1 GeneCards:GC09M127243 HGNC:HGNC:7983
MIM:184757 MIM:612964 MIM:612965 MIM:613957 neXtProt:NX_Q13285
PharmGKB:PA31764 InParanoid:Q13285 PhylomeDB:Q13285
BindingDB:Q13285 ChEMBL:CHEMBL4666 EvolutionaryTrace:Q13285
GenomeRNAi:2516 NextBio:9909 ArrayExpress:Q13285 Bgee:Q13285
CleanEx:HS_NR5A1 Genevestigator:Q13285 GermOnline:ENSG00000136931
Uniprot:Q13285
Length = 461
Score = 142 (55.0 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 50/179 (27%), Positives = 79/179 (44%)
Query: 103 VRWVRCLAPFQTLSKRDQLLLLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERL 158
V W R F+ L DQ+ LLQ W EL + H+ Q + L+ E +
Sbjct: 277 VDWARRCMVFKELEVADQMTLLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTV 336
Query: 159 PPDDVRVNNEIKL-IQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQ 217
+ + + L QE++ + L D E C+K +ILF+ + L + V+ Q++
Sbjct: 337 ATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILFSLDLKFLNNHILVKDAQEK 396
Query: 218 AQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
A L DY Y +F +LLL L +RA+ E L+ K ++P LL +M
Sbjct: 397 ANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEM 455
>ZFIN|ZDB-GENE-990415-184 [details] [associations]
symbol:nr4a2a "nuclear receptor subfamily 4, group
A, member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0021953 "central nervous system
neuron differentiation" evidence=IGI] [GO:0021884 "forebrain neuron
development" evidence=IMP] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003073
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-990415-184 GO:GO:0005634 GO:GO:0046872 GO:GO:0071542
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GO:GO:0021884 GeneTree:ENSGT00640000091364 EMBL:CU179638
IPI:IPI00932496 ProteinModelPortal:F1RER4
Ensembl:ENSDART00000109954 Bgee:F1RER4 Uniprot:F1RER4
Length = 635
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/177 (30%), Positives = 84/177 (47%)
Query: 105 WVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKA-RERLPPDDV 163
W + F L K DQ LL + ++ ELF+L LA S P + S LI C RL V
Sbjct: 457 WAEKIPGFTDLPKPDQDLLFESAFLELFVLRLAYRSNPME-SKLIFCNGVVLHRL--QCV 513
Query: 164 RVNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCIL 222
R E I I E + + ++ D S C+ A+ + T E GL + + VE LQ++ L
Sbjct: 514 RGFGEWIDSIVEFSSNLQNMNLDISAFSCIAALAMVT-ERHGLKEPKRVEDLQNKIVNCL 572
Query: 223 GDYV--RGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
D V G +P +LL LP LR + ++R+F+ + +P ++ ++
Sbjct: 573 KDQVTFNGGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLF 629
>UNIPROTKB|E1BXV1 [details] [associations]
symbol:NR5A1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0005543
GO:GO:0003677 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0051457
GO:GO:2000195 GeneTree:ENSGT00670000097927 EMBL:AADN02026333
EMBL:AADN02026334 EMBL:AADN02026335 EMBL:AADN02026336
EMBL:AADN02026337 IPI:IPI00570723 Ensembl:ENSGALT00000001616
Uniprot:E1BXV1
Length = 167
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/159 (26%), Positives = 69/159 (43%)
Query: 123 LLQESWKELFLL-HL---AQWSIPWDLSLLINCEKARERLPPDDVRVNNEIKL-IQEILA 177
LLQ W EL + H+ Q + L+ E + + + + L QE++
Sbjct: 3 LLQNCWSELLVFDHVYRQLQHGKEHSVLLVTGQEVDLSAVAAQAGSILHSLVLRAQELVL 62
Query: 178 RFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILGDYVRGRYSRQPTRF 237
L D E C+K +ILF+ + L + + Q++A L +Y Y +F
Sbjct: 63 HLHSLQVDRQEFVCLKFLILFSLDVKYLENHALAKDAQEKANAALLEYTVCHYPHCTDKF 122
Query: 238 GRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDM 276
+LLL L +RA+ E L+ K G++P LL +M
Sbjct: 123 RQLLLRLTEVRALSMQAEEYLYHKHLSGEVPCNNLLIEM 161
>ZFIN|ZDB-GENE-980526-284 [details] [associations]
symbol:raraa "retinoic acid receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;IDA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0021575 "hindbrain
morphogenesis" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-284 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526
GO:GO:0021575 HOVERGEN:HBG005606 GO:GO:0003708 EMBL:S74155
EMBL:L03398 EMBL:BC092692 IPI:IPI00505878 PIR:I51256
RefSeq:NP_571481.2 UniGene:Dr.193 HSSP:P10276
ProteinModelPortal:Q90271 SMR:Q90271 STRING:Q90271
Ensembl:ENSDART00000079336 GeneID:30680 KEGG:dre:30680 CTD:30680
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
InParanoid:Q90271 KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7
NextBio:20807033 ArrayExpress:Q90271 Bgee:Q90271 Uniprot:Q90271
Length = 444
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/203 (23%), Positives = 87/203 (42%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
+K E + + + V + + L F TL+ DQ+ LL+ + ++ +L + P ++
Sbjct: 213 DKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMT 272
Query: 149 INCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
+ R + L+ + L D +E G + A+ L + L A
Sbjct: 273 FSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQA 332
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLF-FKETI-GD 266
V++LQ+ L YVR R +P F ++L+ + LR++ ER+ K I G
Sbjct: 333 DKVDVLQEPLLEALKIYVRNRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGS 392
Query: 267 IP--IQRLLGDMYTMEKSYETPG 287
+P IQ +L + +E S G
Sbjct: 393 MPPLIQEMLENSEGLESSSGAQG 415
>ZFIN|ZDB-GENE-990415-250 [details] [associations]
symbol:rorca "RAR-related orphan receptor C a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-250 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:CR450766 IPI:IPI00844980
ProteinModelPortal:F1QGI9 Ensembl:ENSDART00000100484 Bgee:F1QGI9
Uniprot:F1QGI9
Length = 480
Score = 139 (54.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/174 (21%), Positives = 84/174 (48%)
Query: 89 EKCQETTARLLFMAVRWVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLL 148
++C + V + + ++ F LS+ DQ++LL+ ++ L+ + + P + +LL
Sbjct: 278 QQCAVQLTNAIQYVVEFAKRISGFMDLSQNDQIILLKAGCLDVLLIRMCRAYNPINNTLL 337
Query: 149 INCEKARERLPPDDVRVNNEIKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDA 208
+ + A +L V ++ + + E+ +L E A +L +P+ P L DA
Sbjct: 338 FDGKFASPQLFKALVGCDDLVSAVFEMAKTLSRLQLSEEEMALFTATVLLSPDRPWLTDA 397
Query: 209 QPVEMLQDQAQCILGDYVRGRYSRQPTRFGRLLLMLPSLRAVRQSTIERL-FFK 261
Q V+ LQ++ L Y+ + + +++ LP ++++ I++L FF+
Sbjct: 398 QKVQKLQEKVYVALQHYLH-KSGVHEEKLAKMVSKLPMMKSICNLHIDKLEFFR 450
>UNIPROTKB|Q6NXU0 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4, group A, member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001975 "response
to amphetamine" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0010035 "response to inorganic substance"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0017085
"response to insecticide" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021986 "habenula development" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0042053 "regulation
of dopamine metabolic process" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042551 "neuron maturation"
evidence=IEA] [GO:0043085 "positive regulation of catalytic
activity" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0043085 GO:GO:0001764 GO:GO:0033554
GO:GO:0046872 GO:GO:0071542 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001666 GO:GO:0045944 GO:GO:0008344
GO:GO:0001975 GO:GO:0043524 GO:GO:0009791 GO:GO:0010035
GO:GO:0042416 GO:GO:0021952 GO:GO:0042053 GO:GO:0016265
GO:GO:0030522 GO:GO:0043576 GO:GO:0017085 GO:GO:0042551
GO:GO:0021986 HOGENOM:HOG000230925 HOVERGEN:HBG052663 EMBL:AC074099
UniGene:Hs.563344 HGNC:HGNC:7981 ChiTaRS:NR4A2 HSSP:P20393
EMBL:BC066890 EMBL:AK291456 IPI:IPI00927645 SMR:Q6NXU0
STRING:Q6NXU0 Ensembl:ENST00000426264 Uniprot:Q6NXU0
Length = 535
Score = 140 (54.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 105 WVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVR 164
W + F L K DQ LL + ++ ELF+L LA S P + L+ RL VR
Sbjct: 357 WAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRL--QCVR 414
Query: 165 VNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILG 223
E I I E + + ++ D S C+ A+ + T E GL + + VE LQ++ L
Sbjct: 415 GFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLK 473
Query: 224 DYV---RGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
D+V G +R P +LL LP LR + ++R+F+ + +P ++ ++
Sbjct: 474 DHVTFNNGGLNR-PNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLF 529
Score = 40 (19.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 11 KIHNAHHQDSKLEPHNPHHSPDLLPPNGISSVK--IPPTVLYP 51
K+ + + + H P S +++P +G K PPT P
Sbjct: 28 KVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPPTPTTP 70
>UNIPROTKB|Q08E53 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9913 "Bos taurus" [GO:0071542 "dopaminergic neuron
differentiation" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043085
"positive regulation of catalytic activity" evidence=IEA]
[GO:0042551 "neuron maturation" evidence=IEA] [GO:0042416 "dopamine
biosynthetic process" evidence=IEA] [GO:0042053 "regulation of
dopamine metabolic process" evidence=IEA] [GO:0033554 "cellular
response to stress" evidence=IEA] [GO:0031668 "cellular response to
extracellular stimulus" evidence=IEA] [GO:0021986 "habenula
development" evidence=IEA] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=IEA] [GO:0016265 "death"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003073 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0043085 GO:GO:0001764 GO:GO:0033554 GO:GO:0046872
GO:GO:0071542 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0001666 GO:GO:0045944 GO:GO:0008344 GO:GO:0001975
GO:GO:0043524 GO:GO:0006351 GO:GO:0009791 GO:GO:0042416
GO:GO:0021952 GO:GO:0042053 GO:GO:0016265 GO:GO:0030522
GO:GO:0043576 GO:GO:0042551 eggNOG:NOG245120 KO:K08558
GeneTree:ENSGT00640000091364 GO:GO:0021986 HOGENOM:HOG000230925
HOVERGEN:HBG052663 EMBL:BC123415 IPI:IPI00708375
RefSeq:NP_001069676.1 UniGene:Bt.25332 ProteinModelPortal:Q08E53
SMR:Q08E53 STRING:Q08E53 Ensembl:ENSBTAT00000004758 GeneID:540245
KEGG:bta:540245 CTD:4929 InParanoid:Q08E53 OMA:MWEDPGS
OrthoDB:EOG40CHGK NextBio:20878513 Uniprot:Q08E53
Length = 598
Score = 140 (54.3 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 52/177 (29%), Positives = 84/177 (47%)
Query: 105 WVRCLAPFQTLSKRDQLLLLQESWKELFLLHLAQWSIPWDLSLLINCEKARERLPPDDVR 164
W + F L K DQ LL + ++ ELF+L LA S P + L+ RL VR
Sbjct: 420 WAEKIPGFTDLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRL--QCVR 477
Query: 165 VNNE-IKLIQEILARFRQLSPDGSECGCMKAVILFTPETPGLVDAQPVEMLQDQAQCILG 223
E I I E + + ++ D S C+ A+ + T E GL + + VE LQ++ L
Sbjct: 478 GFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVT-ERHGLKEPKRVEELQNKIVNCLK 536
Query: 224 DYV---RGRYSRQPTRFGRLLLMLPSLRAVRQSTIERLFFKETIGDIPIQRLLGDMY 277
D+V G +R P +LL LP LR + ++R+F+ + +P ++ ++
Sbjct: 537 DHVTFNNGGLNR-PNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLF 592
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 11 KIHNAHHQDSKLEPHNPHHSPDLLPPNGISSVK--IPPTVLYP 51
K+ + + + H P S +++P +G K PPT P
Sbjct: 91 KVEDIQMHNYQQHSHLPPQSEEMMPHSGSVYYKPSSPPTPTTP 133
WARNING: HSPs involving 87 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 367 356 0.00080 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 337
No. of states in DFA: 613 (65 KB)
Total size of DFA: 241 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.90u 0.07s 30.97t Elapsed: 00:00:17
Total cpu time: 30.96u 0.07s 31.03t Elapsed: 00:00:17
Start: Thu Aug 15 13:09:42 2013 End: Thu Aug 15 13:09:59 2013
WARNINGS ISSUED: 2