Query psy6613
Match_columns 510
No_of_seqs 259 out of 1612
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 22:36:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6613.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6613hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dey_A Voltage-dependent L-typ 100.0 4.2E-60 1.4E-64 484.9 21.2 293 11-306 1-333 (337)
2 3tvt_A Disks large 1 tumor sup 100.0 1.7E-53 5.9E-58 429.5 16.5 240 45-307 3-287 (292)
3 4dey_A Voltage-dependent L-typ 100.0 9E-48 3.1E-52 393.8 10.8 169 338-507 1-233 (337)
4 1kjw_A Postsynaptic density pr 100.0 1.9E-45 6.6E-50 370.6 18.3 241 47-307 1-292 (295)
5 3shw_A Tight junction protein 100.0 2.1E-45 7.1E-50 391.5 16.1 275 14-307 43-383 (468)
6 3kfv_A Tight junction protein 100.0 7.3E-44 2.5E-48 361.9 18.7 244 45-307 2-300 (308)
7 3tsz_A Tight junction protein 100.0 1.2E-44 4.2E-49 377.7 13.0 274 14-306 51-390 (391)
8 2xkx_A Disks large homolog 4; 100.0 2.2E-43 7.4E-48 392.3 23.3 277 15-307 353-718 (721)
9 1ex7_A Guanylate kinase; subst 100.0 3.2E-33 1.1E-37 264.9 14.1 139 151-291 7-182 (186)
10 3ney_A 55 kDa erythrocyte memb 99.9 1.4E-27 4.6E-32 228.5 12.5 145 144-304 16-197 (197)
11 3a00_A Guanylate kinase, GMP k 99.9 6.9E-25 2.3E-29 203.1 9.4 142 148-291 2-182 (186)
12 3tau_A Guanylate kinase, GMP k 99.9 2.9E-23 9.9E-28 196.0 10.5 144 146-293 7-188 (208)
13 1kgd_A CASK, peripheral plasma 99.9 3.3E-23 1.1E-27 191.2 10.0 139 144-293 2-178 (180)
14 1s96_A Guanylate kinase, GMP k 99.9 5.1E-21 1.8E-25 184.4 15.5 143 147-293 16-197 (219)
15 2qor_A Guanylate kinase; phosp 99.8 1.5E-20 5E-25 176.2 14.3 146 147-294 12-197 (204)
16 1lvg_A Guanylate kinase, GMP k 99.8 7.4E-20 2.5E-24 171.9 14.6 142 151-294 10-188 (198)
17 3tr0_A Guanylate kinase, GMP k 99.7 9.1E-18 3.1E-22 154.9 14.0 142 147-293 7-186 (205)
18 3lnc_A Guanylate kinase, GMP k 99.7 2.4E-17 8.1E-22 156.9 8.2 142 147-293 27-208 (231)
19 2d46_A Calcium channel, voltag 99.7 1.4E-17 4.9E-22 129.1 2.8 43 329-371 17-60 (61)
20 1z6g_A Guanylate kinase; struc 99.6 1.3E-14 4.4E-19 138.3 16.6 145 147-293 23-207 (218)
21 2j41_A Guanylate kinase; GMP, 99.5 6E-14 2E-18 129.2 11.7 143 147-294 6-187 (207)
22 2d46_A Calcium channel, voltag 99.4 9.6E-14 3.3E-18 107.8 3.0 44 2-45 17-61 (61)
23 2ege_A Uncharacterized protein 99.3 2.7E-12 9.2E-17 103.9 7.0 62 45-109 5-67 (75)
24 2csi_A RIM-BP2, RIM binding pr 99.2 7.5E-12 2.6E-16 101.4 6.6 62 46-110 6-68 (76)
25 2lx7_A GAS-7, growth arrest-sp 99.2 5.3E-12 1.8E-16 99.3 5.2 52 49-108 5-56 (60)
26 2lj0_A Sorbin and SH3 domain-c 99.2 1.4E-11 4.7E-16 98.2 6.7 56 46-109 5-60 (65)
27 1tg0_A BBC1 protein, myosin ta 99.2 2E-11 7E-16 96.5 6.8 58 45-109 5-64 (68)
28 2ed1_A 130 kDa phosphatidylino 99.2 1.9E-11 6.6E-16 98.8 6.1 60 43-109 6-65 (76)
29 1gvn_B Zeta; postsegregational 99.2 2.2E-11 7.7E-16 121.2 6.5 146 151-304 39-235 (287)
30 2g6f_X RHO guanine nucleotide 99.1 5.5E-11 1.9E-15 91.4 6.4 54 46-109 3-56 (59)
31 1b07_A Protein (proto-oncogene 99.1 5.3E-11 1.8E-15 93.9 5.9 53 48-109 4-56 (65)
32 1wyx_A CRK-associated substrat 99.1 6.9E-11 2.4E-15 93.6 6.4 54 46-109 2-58 (69)
33 1uti_A GRB2-related adaptor pr 99.1 7.1E-11 2.4E-15 90.3 6.1 51 49-109 3-53 (58)
34 1uj0_A Signal transducing adap 99.1 9E-11 3.1E-15 91.2 6.4 54 46-109 4-57 (62)
35 2gnc_A SLIT-ROBO RHO GTPase-ac 99.1 7.4E-11 2.5E-15 91.1 5.8 53 46-108 5-57 (60)
36 2l0a_A STAM-1, signal transduc 99.1 5.1E-11 1.8E-15 96.4 5.1 61 39-109 9-69 (72)
37 1cka_A C-CRK N-terminal SH3 do 99.1 7.7E-11 2.6E-15 89.8 5.7 52 49-109 3-54 (57)
38 2i0n_A Class VII unconventiona 99.1 8.4E-11 2.9E-15 96.2 6.3 58 43-110 6-64 (80)
39 3ulr_B SRC substrate cortactin 99.1 7.4E-11 2.5E-15 91.9 5.7 56 44-109 6-61 (65)
40 2ak5_A RHO guanine nucleotide 99.1 9.5E-11 3.3E-15 91.3 6.3 54 46-109 5-58 (64)
41 2drm_A Acanthamoeba myosin IB; 99.1 1.1E-10 3.9E-15 89.1 6.6 53 47-109 3-55 (58)
42 1zx6_A YPR154WP; SH3 domain, p 99.1 1E-10 3.4E-15 89.6 6.3 51 49-109 4-54 (58)
43 1w70_A Neutrophil cytosol fact 99.1 9.1E-11 3.1E-15 90.6 6.1 53 47-109 4-56 (60)
44 1sem_A SEM-5; SRC-homology 3 ( 99.1 9.5E-11 3.2E-15 89.5 6.1 52 48-109 3-54 (58)
45 2b86_A Cytoplasmic protein NCK 99.1 9.8E-11 3.3E-15 93.4 6.3 55 46-110 3-57 (67)
46 1k4u_S Phagocyte NADPH oxidase 99.1 1E-10 3.4E-15 90.8 6.2 54 46-109 4-57 (62)
47 1jo8_A ABP1P, actin binding pr 99.1 9.1E-11 3.1E-15 89.9 5.7 53 49-109 2-54 (58)
48 2nwm_A Vinexin; cell adhesion; 99.1 1.2E-10 4.2E-15 91.9 6.5 51 49-109 3-53 (65)
49 1zlm_A Osteoclast stimulating 99.1 1.1E-10 3.9E-15 89.3 6.1 53 48-110 4-56 (58)
50 2bz8_A SH3-domain kinase bindi 99.1 9.1E-11 3.1E-15 89.9 5.5 52 48-109 2-53 (58)
51 2vwf_A Growth factor receptor- 99.1 1.2E-10 4.3E-15 88.8 6.1 52 48-109 3-54 (58)
52 2bzy_A CRK-like protein, CRKL 99.1 1.1E-10 3.8E-15 92.1 6.0 52 48-109 2-55 (67)
53 2dmo_A Neutrophil cytosol fact 99.1 1.7E-10 5.7E-15 91.4 7.0 54 46-109 6-59 (68)
54 2d8j_A FYN-related kinase; SH3 99.1 1.4E-10 4.8E-15 93.4 6.6 59 45-110 5-69 (77)
55 2ew3_A SH3-containing GRB2-lik 99.1 1.3E-10 4.3E-15 92.7 6.2 53 48-110 4-56 (68)
56 2xmf_A Myosin 1E SH3; motor pr 99.1 1.4E-10 4.9E-15 89.3 6.2 53 47-109 5-57 (60)
57 2o9s_A Ponsin; SH3 domain, sig 99.1 1.5E-10 5.2E-15 91.1 6.4 57 45-109 4-60 (67)
58 1x2q_A Signal transducing adap 99.1 1.9E-10 6.7E-15 95.5 7.2 56 46-111 16-71 (88)
59 3h0h_A Proto-oncogene tyrosine 99.1 1.7E-10 5.9E-15 92.0 6.5 57 45-109 13-69 (73)
60 2j6f_A CD2-associated protein; 99.1 1.4E-10 4.7E-15 90.1 5.7 52 48-109 2-54 (62)
61 2dl7_A KIAA0769 protein; SH3 d 99.1 2.2E-10 7.6E-15 91.7 7.0 56 44-109 5-63 (73)
62 2eyx_A V-CRK sarcoma virus CT1 99.1 1.3E-10 4.5E-15 91.9 5.5 54 48-109 7-60 (67)
63 1ue9_A Intersectin 2; beta bar 99.1 2.2E-10 7.6E-15 93.2 7.0 57 47-110 7-65 (80)
64 4glm_A Dynamin-binding protein 99.1 1.8E-10 6.1E-15 91.4 6.2 55 45-109 11-65 (72)
65 2fpe_A C-JUN-amino-terminal ki 99.1 1.7E-10 5.9E-15 89.5 5.9 53 49-109 5-57 (62)
66 2kgt_A Tyrosine-protein kinase 99.1 1.5E-10 5.2E-15 92.2 5.6 56 46-109 9-67 (72)
67 1x2k_A OSTF1, osteoclast stimu 99.1 2E-10 7E-15 90.8 6.1 55 45-109 5-59 (68)
68 2jte_A CD2-associated protein; 99.1 2.6E-10 8.7E-15 88.9 6.6 54 46-109 5-60 (64)
69 2ydl_A SH3 domain-containing k 99.0 2.1E-10 7E-15 91.8 6.1 52 49-110 4-57 (69)
70 3u23_A CD2-associated protein; 99.0 1.8E-10 6.1E-15 89.5 5.6 54 46-109 6-59 (65)
71 2djq_A SH3 domain containing r 99.0 2.7E-10 9.3E-15 89.9 6.7 54 46-109 6-59 (68)
72 2ke9_A Caskin-2; SH3 domain, A 99.0 2.1E-10 7E-15 95.1 6.2 58 45-109 16-77 (83)
73 2fei_A CD2-associated protein; 99.0 8.6E-11 2.9E-15 92.9 3.7 52 49-110 3-54 (65)
74 2j05_A RAS GTPase-activating p 99.0 2.7E-10 9.4E-15 89.2 6.6 54 48-109 6-60 (65)
75 2dbk_A CRK-like protein; struc 99.0 2.6E-10 8.9E-15 94.9 6.8 55 46-110 15-71 (88)
76 1oot_A Hypothetical 40.4 kDa p 99.0 2.5E-10 8.5E-15 87.9 6.1 52 48-109 4-57 (60)
77 2egc_A SH3 and PX domain-conta 99.0 3.1E-10 1E-14 91.7 6.9 56 47-110 10-66 (75)
78 2ebp_A SAM and SH3 domain-cont 99.0 3E-10 1E-14 91.6 6.8 54 46-109 8-63 (73)
79 1csk_A C-SRC SH3 domain; phosp 99.0 2.3E-10 7.8E-15 91.1 6.0 57 46-111 10-67 (71)
80 2dlp_A KIAA1783 protein; SH3 d 99.0 1.5E-10 5E-15 95.7 5.0 57 44-110 5-63 (85)
81 2oaw_A Spectrin alpha chain, b 99.0 1.7E-10 5.9E-15 89.7 5.2 54 49-109 3-61 (65)
82 2csq_A RIM-BP2, RIM binding pr 99.0 1.4E-10 4.7E-15 98.3 5.0 62 47-111 17-80 (97)
83 2dl4_A Protein STAC; SH3 domai 99.0 2.3E-10 7.8E-15 90.6 5.9 53 47-109 7-59 (68)
84 1wie_A RIM binding protein 2; 99.0 1.9E-10 6.5E-15 97.4 5.8 63 46-111 16-79 (96)
85 2kym_A BUD emergence protein 1 99.0 2.1E-10 7.1E-15 101.3 6.3 57 47-110 3-59 (120)
86 4e6r_A Cytoplasmic protein NCK 99.0 3.3E-10 1.1E-14 86.2 6.5 53 48-110 2-54 (58)
87 2dl8_A SLIT-ROBO RHO GTPase-ac 99.0 2.7E-10 9.4E-15 91.1 6.4 54 46-109 8-61 (72)
88 1znw_A Guanylate kinase, GMP k 99.0 3.2E-09 1.1E-13 99.4 14.7 140 146-290 19-198 (207)
89 3c0c_A Endophilin-A2; endocyto 99.0 2.8E-10 9.7E-15 91.2 6.5 53 47-109 13-65 (73)
90 2iim_A Proto-oncogene tyrosine 99.0 3.2E-10 1.1E-14 87.9 6.5 54 47-109 6-59 (62)
91 2cre_A HEF-like protein; SH3 d 99.0 2.4E-10 8E-15 90.7 5.7 55 45-109 5-62 (71)
92 2yuo_A CIP85, RUN and TBC1 dom 99.0 3.5E-10 1.2E-14 91.7 6.8 56 45-110 5-60 (78)
93 1u5s_A Cytoplasmic protein NCK 99.0 2.8E-10 9.6E-15 90.4 6.1 56 45-109 4-61 (71)
94 1yn8_A NBP2, NAP1-binding prot 99.0 2.4E-10 8.4E-15 87.3 5.5 53 49-109 3-55 (59)
95 3ngp_A Spectrin alpha chain, b 99.0 3.2E-10 1.1E-14 87.4 6.2 52 48-109 7-58 (62)
96 4esr_A Jouberin; AHI-1, AHI1, 99.0 2.8E-10 9.6E-15 89.9 6.0 57 47-112 6-62 (69)
97 2ysq_A RHO guanine nucleotide 99.0 3.5E-10 1.2E-14 92.5 6.5 56 45-110 8-63 (81)
98 2vkn_A Protein SSU81; membrane 99.0 2.9E-10 1E-14 90.3 5.9 56 46-109 4-59 (70)
99 2eqi_A Phospholipase C, gamma 99.0 2.3E-10 8E-15 90.5 5.2 55 46-109 6-60 (69)
100 1y0m_A 1-phosphatidylinositol- 99.0 3.1E-10 1E-14 87.8 5.7 52 48-109 4-56 (61)
101 2v1q_A SLA1, cytoskeleton asse 99.0 4.2E-10 1.4E-14 86.3 6.4 54 48-109 3-57 (60)
102 2ecz_A Sorbin and SH3 domain-c 99.0 2.3E-10 7.9E-15 90.7 5.1 56 46-109 6-61 (70)
103 2lcs_A NAP1-binding protein 2; 99.0 3.3E-10 1.1E-14 91.4 6.1 56 47-110 5-60 (73)
104 2jt4_A Cytoskeleton assembly c 99.0 5.1E-10 1.7E-14 88.8 7.1 55 47-109 6-61 (71)
105 2rqv_A BUD emergence protein 1 99.0 9.4E-11 3.2E-15 102.2 3.0 59 46-111 4-62 (108)
106 1zuy_A Myosin-5 isoform; SH3 d 99.0 4.5E-10 1.5E-14 85.6 6.4 53 49-109 2-55 (58)
107 1i07_A Epidermal growth factor 99.0 2.2E-10 7.6E-15 88.3 4.8 51 49-109 3-53 (60)
108 1gl5_A Tyrosine-protein kinase 99.0 2.7E-10 9.1E-15 89.8 5.3 54 49-111 4-57 (67)
109 2epd_A RHO GTPase-activating p 99.0 2.8E-10 9.7E-15 92.1 5.4 55 46-110 9-63 (76)
110 1neg_A Spectrin alpha chain, b 99.0 3.5E-10 1.2E-14 93.9 6.0 56 45-110 15-70 (83)
111 1ruw_A Myosin-3 isoform, MYO3; 99.0 4.6E-10 1.6E-14 88.8 6.5 54 49-110 4-58 (69)
112 2k9g_A SH3 domain-containing k 99.0 5.5E-10 1.9E-14 89.3 6.9 54 46-109 8-63 (73)
113 2pqh_A Spectrin alpha chain, b 99.0 4.1E-10 1.4E-14 92.0 6.2 53 49-111 4-56 (80)
114 2cud_A SRC-like-adapter; SH3 d 99.0 3.8E-10 1.3E-14 92.2 6.0 55 47-110 17-71 (79)
115 2d8h_A SH3YL1 protein; SH3 dom 99.0 2.7E-10 9.3E-15 92.8 5.1 58 43-110 13-72 (80)
116 2dl3_A Sorbin and SH3 domain-c 99.0 4.8E-10 1.7E-14 88.3 6.3 53 47-109 7-59 (68)
117 1ujy_A RHO guanine nucleotide 99.0 3.3E-10 1.1E-14 91.4 5.5 55 46-110 9-63 (76)
118 2a28_A BZZ1 protein; SH3 domai 99.0 4.3E-10 1.5E-14 84.9 5.7 50 49-108 2-52 (54)
119 2ct3_A Vinexin; SH3 domian, st 99.0 7.1E-10 2.4E-14 87.7 7.2 56 46-109 6-61 (70)
120 3thk_A Spectrin alpha chain, b 99.0 4.7E-10 1.6E-14 89.4 6.2 53 48-110 6-58 (73)
121 3cqt_A P59-FYN, proto-oncogene 99.0 3.7E-10 1.3E-14 92.5 5.7 56 48-111 6-61 (79)
122 1nm7_A Peroxisomal membrane pr 99.0 3.7E-10 1.3E-14 90.9 5.5 55 47-109 7-66 (69)
123 2fpf_A C-JUN-amino-terminal ki 99.0 4.3E-10 1.5E-14 89.6 5.8 53 49-109 8-60 (71)
124 2ed0_A ABL interactor 2; coile 99.0 6E-10 2E-14 90.6 6.7 54 46-109 16-69 (78)
125 2yuq_A Tyrosine-protein kinase 99.0 3.9E-10 1.3E-14 93.1 5.7 58 45-111 17-74 (85)
126 4f14_A Nebulette; SH3 domain, 99.0 4.8E-10 1.6E-14 86.8 5.8 54 48-109 7-60 (64)
127 2dbm_A SH3-containing GRB2-lik 99.0 3.7E-10 1.2E-14 90.5 5.2 54 47-110 7-60 (73)
128 2ekh_A SH3 and PX domain-conta 99.0 6.6E-10 2.3E-14 90.8 6.8 55 47-111 8-62 (80)
129 2dil_A Proline-serine-threonin 99.0 5.3E-10 1.8E-14 88.5 5.9 54 46-109 7-60 (69)
130 1zuu_A BZZ1 protein; SH3 domai 99.0 3.8E-10 1.3E-14 86.1 4.9 52 49-108 3-55 (58)
131 1z9q_A Neutrophil cytosol fact 99.0 2E-10 6.9E-15 94.7 3.6 54 46-109 17-70 (79)
132 2kxc_A Brain-specific angiogen 99.0 5E-10 1.7E-14 88.1 5.7 55 47-109 6-62 (67)
133 1w1f_A Tyrosine-protein kinase 99.0 8.2E-10 2.8E-14 86.1 6.8 54 47-109 7-60 (65)
134 3rnj_A Brain-specific angiogen 99.0 6.6E-10 2.3E-14 87.4 6.3 56 47-109 7-63 (67)
135 2gqi_A RAS GTPase-activating p 99.0 2.6E-10 9E-15 91.0 4.0 55 47-109 7-62 (71)
136 2m0y_A Dedicator of cytokinesi 99.0 4.6E-10 1.6E-14 89.7 5.4 55 47-109 11-65 (74)
137 1ugv_A KIAA0621, olygophrenin- 99.0 2.2E-10 7.6E-15 91.7 3.5 54 46-109 9-63 (72)
138 1x2p_A Protein arginine N-meth 99.0 5.4E-10 1.8E-14 88.2 5.7 53 47-109 7-59 (68)
139 1x69_A Cortactin isoform A; SH 99.0 5.5E-10 1.9E-14 90.9 5.9 54 46-109 16-69 (79)
140 1uff_A Intersectin 2; beta bar 99.0 4.2E-10 1.4E-14 94.5 5.3 55 47-111 5-61 (93)
141 1wx6_A Cytoplasmic protein NCK 99.0 6.7E-10 2.3E-14 92.5 6.5 59 44-111 14-74 (91)
142 2jw4_A Cytoplasmic protein NCK 99.0 6.1E-10 2.1E-14 89.2 5.9 54 47-110 7-60 (72)
143 2dl5_A KIAA0769 protein; SH3 d 99.0 6.8E-10 2.3E-14 90.2 6.3 56 46-110 12-68 (78)
144 1wxt_A Hypothetical protein FL 99.0 8.1E-10 2.8E-14 87.4 6.4 54 47-110 7-60 (68)
145 2da9_A SH3-domain kinase bindi 99.0 7.6E-10 2.6E-14 87.8 6.2 53 47-109 7-61 (70)
146 2x3w_D Syndapin I, protein kin 99.0 5.3E-10 1.8E-14 85.9 5.0 53 48-109 4-57 (60)
147 1x43_A Endophilin B1, SH3 doma 99.0 7.4E-10 2.5E-14 90.5 6.2 54 46-109 16-71 (81)
148 2dm1_A Protein VAV-2; RHO fami 99.0 5.5E-10 1.9E-14 89.6 5.3 55 46-110 6-62 (73)
149 3eg3_A Proto-oncogene tyrosine 99.0 8E-10 2.7E-14 85.4 6.0 52 48-109 6-58 (63)
150 1s1n_A Nephrocystin 1; beta ba 99.0 6.1E-10 2.1E-14 87.7 5.4 56 45-109 8-63 (68)
151 2cub_A Cytoplasmic protein NCK 99.0 8.2E-10 2.8E-14 92.0 6.4 56 46-111 16-71 (88)
152 1j3t_A Intersectin 2; beta bar 99.0 7.3E-10 2.5E-14 89.1 5.8 54 46-110 9-62 (74)
153 1gbq_A GRB2; complex (signal t 98.9 5.1E-10 1.8E-14 90.1 4.9 53 47-109 9-62 (74)
154 2enm_A Sorting nexin-9; SH3-li 98.9 9.5E-10 3.2E-14 88.8 6.4 56 46-110 8-65 (77)
155 4ag1_C Fynomer; hydrolase-de n 98.9 8.2E-10 2.8E-14 91.4 6.1 57 47-111 6-62 (84)
156 2o2o_A SH3-domain kinase-bindi 98.9 3.6E-10 1.2E-14 95.5 3.9 58 43-110 14-71 (92)
157 2yun_A Nostrin; nitric oxide s 98.9 1.1E-09 3.7E-14 89.0 6.5 54 47-110 7-60 (79)
158 1uhf_A Intersectin 2; beta bar 98.9 4.7E-10 1.6E-14 89.2 4.2 53 46-109 7-59 (69)
159 2k2m_A EPS8-like protein 1; al 98.9 8.2E-10 2.8E-14 87.5 5.6 54 47-110 8-61 (68)
160 1spk_A RSGI RUH-010, riken cDN 98.9 7.2E-10 2.5E-14 88.4 5.3 55 47-109 7-63 (72)
161 2rf0_A Mitogen-activated prote 98.9 8.5E-10 2.9E-14 92.7 6.0 54 47-109 29-87 (89)
162 2ct4_A CDC42-interacting prote 98.9 1.3E-09 4.3E-14 86.5 6.5 57 45-110 5-62 (70)
163 2cuc_A SH3 domain containing r 98.9 7.5E-10 2.6E-14 87.6 5.2 55 47-109 7-61 (70)
164 1uhc_A KIAA1010 protein; beta 98.9 6.5E-10 2.2E-14 90.4 4.9 54 47-110 13-70 (79)
165 2kxd_A 11-MER peptide, SH3 dom 98.9 4.8E-10 1.6E-14 89.9 4.0 51 49-110 2-52 (73)
166 2dnu_A RUH-061, SH3 multiple d 98.9 8E-10 2.7E-14 87.8 5.3 55 46-110 7-61 (71)
167 1x6g_A Megakaryocyte-associate 98.9 1.3E-09 4.4E-14 89.4 6.6 56 48-111 18-74 (81)
168 2yup_A Vinexin; sorbin and SH3 98.9 6E-10 2E-14 92.9 4.6 57 47-111 17-73 (90)
169 2v1r_A Peroxisomal membrane pr 98.9 8E-10 2.7E-14 89.7 5.3 56 46-109 13-73 (80)
170 2jxb_A T-cell surface glycopro 98.9 4.5E-10 1.5E-14 93.1 3.8 54 47-110 31-84 (86)
171 1wi7_A SH3-domain kinase bindi 98.9 3E-10 1E-14 89.7 2.3 52 48-109 8-59 (68)
172 1aww_A ATK, AMGX1, BPK, bruton 98.9 3.4E-10 1.2E-14 89.1 2.6 56 46-110 7-62 (67)
173 1jqq_A PEX13P, peroxisomal mem 98.9 1.3E-09 4.5E-14 91.0 6.2 57 46-110 13-74 (92)
174 1x6b_A RHO guanine exchange fa 98.9 1.5E-09 5E-14 88.4 6.2 55 46-109 16-70 (79)
175 2ega_A SH3 and PX domain-conta 98.9 8.2E-10 2.8E-14 87.6 4.6 54 47-110 8-61 (70)
176 2rqr_A CED-12 homolog, engulfm 98.9 1.4E-09 4.8E-14 95.9 6.3 55 47-109 59-113 (119)
177 2yt6_A Adult MALE urinary blad 98.9 1.9E-09 6.7E-14 92.3 6.9 57 47-111 27-83 (109)
178 1i1j_A Melanoma derived growth 98.9 1.7E-09 5.8E-14 94.2 6.6 58 47-111 22-87 (108)
179 1awj_A ITK; transferase, regul 98.9 6.9E-11 2.4E-15 95.8 -2.4 55 47-110 20-74 (77)
180 3reb_B Tyrosine-protein kinase 98.9 2E-09 6.9E-14 89.5 6.2 55 48-111 4-58 (90)
181 1wxb_A Epidermal growth factor 98.9 1.2E-09 4E-14 86.5 4.5 54 47-110 7-60 (68)
182 2oi3_A Tyrosine-protein kinase 98.9 2.9E-09 1E-13 87.5 7.0 54 47-109 25-78 (86)
183 1bb9_A Amphiphysin 2; transfer 98.9 9.5E-10 3.3E-14 96.6 3.8 57 46-109 43-111 (115)
184 1udl_A Intersectin 2, KIAA1256 98.9 1E-09 3.6E-14 92.8 3.9 56 44-109 31-86 (98)
185 3qwx_X Cell death abnormality 98.9 1.9E-09 6.6E-14 99.6 5.7 58 43-109 114-171 (174)
186 1k1z_A VAV; SH3, proto-oncogen 98.8 3.6E-09 1.2E-13 85.7 5.5 60 45-109 13-73 (78)
187 2e5k_A Suppressor of T-cell re 98.8 4.6E-09 1.6E-13 88.1 6.0 56 47-110 16-75 (94)
188 3i5r_A Phosphatidylinositol 3- 98.8 2.8E-09 9.7E-14 87.4 4.2 55 47-109 5-74 (83)
189 1wxu_A Peroxisomal biogenesis 98.8 2.7E-09 9.3E-14 89.4 4.1 56 46-110 16-75 (93)
190 1mv3_A MYC box dependent inter 98.8 2.9E-09 9.9E-14 103.2 4.7 57 46-109 141-209 (213)
191 2kbt_A Chimera of proto-oncoge 98.8 6.1E-09 2.1E-13 94.5 6.3 55 47-111 5-60 (142)
192 1hsq_A Phospholipase C-gamma ( 98.8 4.4E-10 1.5E-14 89.6 -1.3 54 47-110 6-60 (71)
193 4d8k_A Tyrosine-protein kinase 98.7 9E-09 3.1E-13 95.2 6.2 56 47-111 12-67 (175)
194 3o5z_A Phosphatidylinositol 3- 98.7 1.2E-08 4.2E-13 85.3 5.5 56 46-109 10-80 (90)
195 1gri_A Growth factor bound pro 98.7 1.5E-08 5.1E-13 96.0 5.8 54 46-109 157-210 (217)
196 3lw7_A Adenylate kinase relate 98.7 8.8E-08 3E-12 84.2 10.3 139 151-294 7-177 (179)
197 1gcq_C VAV proto-oncogene; SH3 98.7 3.4E-08 1.2E-12 78.1 6.7 59 49-109 6-65 (70)
198 1g2b_A Spectrin alpha chain; c 98.7 2E-08 6.8E-13 78.0 5.3 41 47-94 21-61 (62)
199 3jv3_A Intersectin-1; SH3 doma 98.6 2.4E-08 8.1E-13 97.7 6.3 53 48-110 3-55 (283)
200 3a98_A DOCK2, dedicator of cyt 98.6 1.8E-08 6.1E-13 94.8 4.9 56 47-110 17-72 (184)
201 1u3o_A Huntingtin-associated p 98.6 4.5E-08 1.5E-12 81.7 5.0 57 45-109 16-75 (82)
202 3qwy_A Cell death abnormality 98.6 4.6E-08 1.6E-12 98.3 5.7 62 40-110 140-201 (308)
203 1ng2_A Neutrophil cytosolic fa 98.5 6.6E-08 2.3E-12 91.2 5.8 55 46-110 10-64 (193)
204 1ng2_A Neutrophil cytosolic fa 98.5 8.1E-08 2.8E-12 90.6 6.1 54 47-110 81-134 (193)
205 2dvj_A V-CRK sarcoma virus CT1 98.5 1.6E-08 5.4E-13 97.9 1.3 56 47-111 136-191 (230)
206 2pz1_A RHO guanine nucleotide 98.5 9.1E-08 3.1E-12 100.6 6.8 55 46-110 29-83 (466)
207 2h8h_A Proto-oncogene tyrosine 98.5 8E-08 2.7E-12 102.5 5.8 56 48-111 86-141 (535)
208 1fmk_A C-SRC, P60-SRC, tyrosin 98.5 1.3E-07 4.3E-12 98.5 5.9 55 49-111 4-58 (452)
209 2dyb_A Neutrophil cytosol fact 98.5 1.4E-07 4.8E-12 96.2 6.1 53 48-110 175-227 (341)
210 1k9a_A Carboxyl-terminal SRC k 98.4 1.8E-07 6.1E-12 97.3 6.2 57 46-111 10-67 (450)
211 2eyz_A V-CRK sarcoma virus CT1 98.4 1.8E-07 6.2E-12 94.0 6.0 56 47-111 134-189 (304)
212 3kb2_A SPBC2 prophage-derived 98.4 1.7E-06 6E-11 76.6 11.7 135 151-292 7-165 (173)
213 1tuc_A Alpha-spectrin; capping 98.4 3.2E-07 1.1E-11 71.5 5.0 39 69-110 4-42 (63)
214 1gri_A Growth factor bound pro 98.4 2.3E-07 8E-12 87.7 4.6 51 49-109 2-53 (217)
215 1qcf_A Haematopoetic cell kina 98.3 4.2E-07 1.4E-11 94.4 6.6 56 46-110 7-62 (454)
216 1opk_A P150, C-ABL, proto-onco 98.3 4.3E-07 1.5E-11 95.8 5.8 53 48-110 44-97 (495)
217 2lqn_A CRK-like protein; SH2, 97.6 7.9E-08 2.7E-12 96.6 0.0 56 47-111 125-180 (303)
218 2eyz_A V-CRK sarcoma virus CT1 98.3 2.3E-07 7.9E-12 93.2 3.3 54 47-110 237-292 (304)
219 3dl0_A Adenylate kinase; phosp 98.3 8E-07 2.7E-11 82.8 6.8 139 151-292 6-213 (216)
220 2lqn_A CRK-like protein; SH2, 97.6 8.7E-08 3E-12 96.3 0.0 57 47-111 237-293 (303)
221 3t61_A Gluconokinase; PSI-biol 98.3 5.8E-06 2E-10 76.3 12.2 141 151-294 24-180 (202)
222 4eun_A Thermoresistant glucoki 98.3 6.8E-06 2.3E-10 76.2 12.6 140 146-291 28-191 (200)
223 2z0h_A DTMP kinase, thymidylat 98.3 8.6E-07 2.9E-11 80.6 6.1 138 151-293 6-191 (197)
224 4eaq_A DTMP kinase, thymidylat 98.3 3.3E-06 1.1E-10 81.1 10.2 145 146-295 25-226 (229)
225 2de0_X Alpha-(1,6)-fucosyltran 98.2 8.6E-07 2.9E-11 96.0 6.4 56 48-111 443-498 (526)
226 1qhx_A CPT, protein (chloramph 98.2 7.5E-06 2.5E-10 73.5 11.5 131 151-289 9-174 (178)
227 3tlx_A Adenylate kinase 2; str 98.2 1.7E-06 5.8E-11 83.4 7.5 138 151-291 35-241 (243)
228 1ri9_A FYN-binding protein; SH 98.2 4.7E-07 1.6E-11 78.3 3.0 53 49-110 41-95 (102)
229 2jmc_A Spectrin alpha chain, b 98.2 7.9E-07 2.7E-11 72.0 3.2 40 69-111 6-45 (77)
230 2v54_A DTMP kinase, thymidylat 98.1 4.7E-05 1.6E-09 69.5 14.3 141 151-297 10-194 (204)
231 3haj_A Human pacsin2 F-BAR; pa 98.1 4.2E-07 1.4E-11 96.9 0.0 55 47-110 428-483 (486)
232 1nks_A Adenylate kinase; therm 98.1 1.6E-05 5.4E-10 71.5 10.4 139 151-291 7-193 (194)
233 3fb4_A Adenylate kinase; psych 98.1 2.9E-06 1E-10 78.8 5.6 139 151-292 6-213 (216)
234 1v1c_A Obscurin; muscle, sarco 98.1 5.5E-06 1.9E-10 67.3 6.2 56 50-110 8-66 (71)
235 1nn5_A Similar to deoxythymidy 98.1 1.8E-05 6.3E-10 72.7 10.5 141 151-297 15-204 (215)
236 2c95_A Adenylate kinase 1; tra 98.0 2E-05 6.7E-10 71.5 9.7 139 151-294 15-194 (196)
237 2f6r_A COA synthase, bifunctio 97.9 6.9E-05 2.3E-09 74.0 12.8 94 200-298 178-273 (281)
238 2gtj_A FYN-binding protein; SH 97.9 9.1E-06 3.1E-10 69.6 5.1 54 46-109 27-82 (96)
239 1ly1_A Polynucleotide kinase; 97.9 1.5E-05 5E-10 71.1 6.5 131 151-288 8-167 (181)
240 3qwy_A Cell death abnormality 97.9 1.5E-06 5.1E-11 87.3 0.0 57 47-111 247-303 (308)
241 1kht_A Adenylate kinase; phosp 97.9 3.2E-05 1.1E-09 69.5 8.7 91 201-291 83-191 (192)
242 3trf_A Shikimate kinase, SK; a 97.9 1.2E-05 4.3E-10 72.6 5.9 139 151-293 11-174 (185)
243 1knq_A Gluconate kinase; ALFA/ 97.9 0.0002 6.9E-09 64.1 13.7 136 151-291 14-171 (175)
244 1qf9_A UMP/CMP kinase, protein 97.9 5.5E-05 1.9E-09 67.9 9.8 139 151-292 12-190 (194)
245 3vaa_A Shikimate kinase, SK; s 97.9 7E-05 2.4E-09 69.2 10.6 140 151-295 31-197 (199)
246 3iij_A Coilin-interacting nucl 97.8 0.0001 3.4E-09 66.6 11.1 91 151-248 17-120 (180)
247 2bwj_A Adenylate kinase 5; pho 97.8 6.1E-05 2.1E-09 68.4 9.4 141 151-294 18-197 (199)
248 2cdn_A Adenylate kinase; phosp 97.8 0.00023 7.8E-09 65.5 13.1 144 144-291 17-199 (201)
249 3pvl_A Myosin VIIA isoform 1; 97.8 2.2E-05 7.5E-10 87.0 6.3 65 32-108 563-634 (655)
250 3lv8_A DTMP kinase, thymidylat 97.8 7.3E-05 2.5E-09 72.8 9.1 147 146-296 26-231 (236)
251 2plr_A DTMP kinase, probable t 97.7 0.00033 1.1E-08 63.9 12.7 139 151-296 10-210 (213)
252 4edh_A DTMP kinase, thymidylat 97.7 0.00012 4.1E-09 69.9 10.0 146 147-296 6-209 (213)
253 2jaq_A Deoxyguanosine kinase; 97.7 0.0002 6.9E-09 64.9 10.9 67 226-293 127-200 (205)
254 3a8t_A Adenylate isopentenyltr 97.7 6.8E-05 2.3E-09 77.2 8.6 93 151-245 46-194 (339)
255 3zvl_A Bifunctional polynucleo 97.7 3.3E-05 1.1E-09 80.5 6.1 121 147-276 258-393 (416)
256 3ehr_A Osteoclast-stimulating 97.7 4.8E-05 1.7E-09 70.1 6.5 56 47-112 14-69 (222)
257 1y63_A LMAJ004144AAA protein; 97.7 0.00038 1.3E-08 63.6 12.3 136 151-294 16-175 (184)
258 1ukz_A Uridylate kinase; trans 97.6 0.00037 1.3E-08 63.9 11.6 138 151-293 21-201 (203)
259 2rhm_A Putative kinase; P-loop 97.6 8.2E-05 2.8E-09 67.2 6.9 92 151-246 11-126 (193)
260 2pbr_A DTMP kinase, thymidylat 97.5 0.0024 8.1E-08 57.3 15.1 95 195-292 76-190 (195)
261 3v9p_A DTMP kinase, thymidylat 97.5 4.5E-05 1.5E-09 73.9 3.9 144 146-292 24-225 (227)
262 2wwf_A Thymidilate kinase, put 97.5 7.5E-05 2.5E-09 68.6 4.9 136 151-293 16-199 (212)
263 3pe0_A Plectin; cytoskeleton, 97.5 6.7E-05 2.3E-09 75.0 4.8 51 47-109 198-248 (283)
264 1jjv_A Dephospho-COA kinase; P 97.4 0.0014 4.8E-08 60.2 11.8 91 201-296 104-199 (206)
265 1ycs_B 53BP2, P53BP2; ankyrin 97.4 0.00016 5.6E-09 67.8 5.4 54 47-110 170-226 (239)
266 2ze6_A Isopentenyl transferase 97.4 0.00017 5.8E-09 70.0 5.7 94 151-246 7-139 (253)
267 1zak_A Adenylate kinase; ATP:A 97.3 0.0014 4.7E-08 61.3 11.5 141 151-295 11-212 (222)
268 2vli_A Antibiotic resistance p 97.3 0.0012 4E-08 59.1 10.5 133 151-291 11-169 (183)
269 1vht_A Dephospho-COA kinase; s 97.3 0.0022 7.5E-08 59.6 12.7 91 201-296 106-197 (218)
270 4tmk_A Protein (thymidylate ki 97.3 0.0013 4.6E-08 62.7 11.3 145 147-296 3-209 (213)
271 1uf9_A TT1252 protein; P-loop, 97.3 0.00092 3.1E-08 60.7 9.6 85 202-292 106-192 (203)
272 3umf_A Adenylate kinase; rossm 97.2 0.00056 1.9E-08 65.8 7.8 144 147-293 29-213 (217)
273 1zd8_A GTP:AMP phosphotransfer 97.2 0.00058 2E-08 64.2 7.5 92 151-245 13-128 (227)
274 1rz3_A Hypothetical protein rb 97.2 0.00059 2E-08 63.3 6.8 71 201-279 124-201 (201)
275 2if2_A Dephospho-COA kinase; a 97.1 0.0018 6.3E-08 59.2 9.8 83 203-292 106-190 (204)
276 3cm0_A Adenylate kinase; ATP-b 97.1 0.00091 3.1E-08 60.2 7.3 136 151-291 10-184 (186)
277 3sr0_A Adenylate kinase; phosp 97.0 0.0015 5.2E-08 62.0 7.9 139 151-292 6-203 (206)
278 2dyb_A Neutrophil cytosol fact 96.9 1.2E-05 4E-10 82.0 -8.4 52 51-107 270-325 (341)
279 3a4m_A L-seryl-tRNA(SEC) kinas 96.8 0.0036 1.2E-07 60.6 9.0 134 151-288 10-168 (260)
280 2xb4_A Adenylate kinase; ATP-b 96.8 0.002 7E-08 60.7 7.0 90 151-246 6-127 (223)
281 4hlc_A DTMP kinase, thymidylat 96.8 0.014 4.6E-07 55.2 12.6 141 151-295 8-202 (205)
282 3asz_A Uridine kinase; cytidin 96.7 0.015 5.1E-07 53.4 12.1 73 223-296 124-206 (211)
283 1ug1_A KIAA1010 protein; struc 96.7 0.0023 7.8E-08 54.3 5.9 59 41-110 12-74 (92)
284 4e22_A Cytidylate kinase; P-lo 96.7 0.012 4E-07 56.8 11.8 91 199-293 142-244 (252)
285 3exa_A TRNA delta(2)-isopenten 96.7 0.0011 3.7E-08 67.9 4.5 59 151-209 9-99 (322)
286 1ltq_A Polynucleotide kinase; 96.7 0.0046 1.6E-07 60.1 8.9 109 151-261 8-144 (301)
287 3hjn_A DTMP kinase, thymidylat 96.6 0.0029 9.8E-08 59.4 6.3 138 151-292 6-190 (197)
288 3r6n_A Desmoplakin; spectrin r 96.6 0.0013 4.3E-08 70.1 4.1 51 47-109 283-333 (450)
289 1q3t_A Cytidylate kinase; nucl 96.5 0.058 2E-06 50.9 15.2 89 199-292 132-233 (236)
290 2h92_A Cytidylate kinase; ross 96.5 0.028 9.7E-07 51.8 12.8 88 198-291 114-215 (219)
291 3foz_A TRNA delta(2)-isopenten 96.5 0.0019 6.3E-08 66.0 5.0 59 151-209 16-106 (316)
292 2iyv_A Shikimate kinase, SK; t 96.5 0.0013 4.6E-08 59.2 3.4 130 151-290 8-165 (184)
293 2bdt_A BH3686; alpha-beta prot 96.5 0.003 1E-07 57.2 5.4 96 151-248 8-125 (189)
294 1tev_A UMP-CMP kinase; ploop, 96.5 0.0063 2.1E-07 54.4 7.5 89 201-292 85-193 (196)
295 1e6c_A Shikimate kinase; phosp 96.4 0.0023 7.9E-08 56.7 4.2 65 225-291 95-168 (173)
296 1zp6_A Hypothetical protein AT 96.4 0.013 4.3E-07 52.8 9.2 142 147-292 9-174 (191)
297 3ake_A Cytidylate kinase; CMP 96.4 0.058 2E-06 48.9 13.7 84 203-291 119-206 (208)
298 2p5t_B PEZT; postsegregational 96.4 0.01 3.4E-07 57.1 8.8 94 151-245 38-157 (253)
299 1gtv_A TMK, thymidylate kinase 96.3 0.00042 1.4E-08 63.7 -1.1 135 151-288 6-208 (214)
300 3fdi_A Uncharacterized protein 96.3 0.031 1.1E-06 52.3 11.8 97 192-292 87-197 (201)
301 4i1u_A Dephospho-COA kinase; s 96.3 0.028 9.7E-07 53.9 11.6 86 202-296 112-204 (210)
302 3eph_A TRNA isopentenyltransfe 96.3 0.0023 8E-08 67.4 4.1 58 151-208 8-97 (409)
303 2qt1_A Nicotinamide riboside k 96.3 0.051 1.7E-06 49.8 12.8 17 151-167 27-43 (207)
304 1cke_A CK, MSSA, protein (cyti 96.3 0.026 9E-07 52.1 10.8 90 201-295 122-224 (227)
305 1e4v_A Adenylate kinase; trans 96.2 0.013 4.5E-07 54.3 8.6 92 151-245 6-123 (214)
306 3ld9_A DTMP kinase, thymidylat 96.2 0.0037 1.3E-07 60.4 5.0 147 146-296 20-218 (223)
307 2pt5_A Shikimate kinase, SK; a 96.2 0.0019 6.6E-08 57.0 2.4 61 225-291 94-161 (168)
308 3tvt_A Disks large 1 tumor sup 96.1 0.0018 6.1E-08 65.1 2.2 64 372-436 42-120 (292)
309 1uj2_A Uridine-cytidine kinase 96.1 0.03 1E-06 53.5 10.5 17 151-167 28-44 (252)
310 1aky_A Adenylate kinase; ATP:A 95.9 0.03 1E-06 52.0 9.5 92 151-245 10-132 (220)
311 1ak2_A Adenylate kinase isoenz 95.9 0.11 3.7E-06 48.9 13.2 17 151-167 22-38 (233)
312 3nwj_A ATSK2; P loop, shikimat 95.9 0.031 1E-06 54.6 9.6 138 151-297 54-240 (250)
313 3tmk_A Thymidylate kinase; pho 95.7 0.046 1.6E-06 52.3 10.0 148 147-297 5-206 (216)
314 3be4_A Adenylate kinase; malar 95.6 0.03 1E-06 52.2 8.2 94 151-246 11-133 (217)
315 1via_A Shikimate kinase; struc 95.5 0.0089 3E-07 53.5 3.9 131 151-291 10-164 (175)
316 1m7g_A Adenylylsulfate kinase; 95.4 0.018 6.1E-07 53.4 5.6 133 151-292 31-201 (211)
317 2grj_A Dephospho-COA kinase; T 95.3 0.087 3E-06 49.2 10.1 76 202-294 111-187 (192)
318 2yvu_A Probable adenylyl-sulfa 95.3 0.054 1.8E-06 48.8 8.4 139 151-293 19-183 (186)
319 2gks_A Bifunctional SAT/APS ki 95.2 0.0051 1.7E-07 66.6 1.6 139 151-292 378-539 (546)
320 1zuh_A Shikimate kinase; alpha 95.2 0.073 2.5E-06 47.0 8.7 133 151-290 13-166 (168)
321 3hdt_A Putative kinase; struct 95.1 0.18 6.1E-06 48.3 11.9 95 193-292 107-217 (223)
322 2xkx_A Disks large homolog 4; 95.1 0.0095 3.2E-07 66.4 3.3 44 402-451 513-561 (721)
323 3uie_A Adenylyl-sulfate kinase 94.8 0.099 3.4E-06 47.9 8.8 138 147-293 25-194 (200)
324 3d3q_A TRNA delta(2)-isopenten 94.8 0.047 1.6E-06 56.0 7.3 57 151-207 13-101 (340)
325 3crm_A TRNA delta(2)-isopenten 94.5 0.036 1.2E-06 56.5 5.6 59 151-209 11-101 (323)
326 1kjw_A Postsynaptic density pr 94.3 0.017 5.9E-07 57.8 2.5 44 402-451 87-135 (295)
327 2pez_A Bifunctional 3'-phospho 94.3 0.078 2.7E-06 47.4 6.7 64 226-292 107-174 (179)
328 2jeo_A Uridine-cytidine kinase 94.3 1 3.5E-05 42.5 14.8 92 202-297 134-235 (245)
329 4gp7_A Metallophosphoesterase; 94.2 0.12 4.2E-06 46.5 7.9 133 151-284 15-163 (171)
330 2vp4_A Deoxynucleoside kinase; 93.7 0.067 2.3E-06 50.4 5.3 69 226-295 149-226 (230)
331 3gmt_A Adenylate kinase; ssgci 93.3 0.13 4.4E-06 50.1 6.6 94 150-246 13-132 (230)
332 2axn_A 6-phosphofructo-2-kinas 93.3 0.21 7.1E-06 53.7 8.9 45 200-246 117-169 (520)
333 1p5z_B DCK, deoxycytidine kina 93.0 0.19 6.4E-06 48.1 7.2 70 226-296 177-261 (263)
334 1x6v_B Bifunctional 3'-phospho 92.8 0.21 7.2E-06 55.2 8.1 142 147-292 52-221 (630)
335 3r20_A Cytidylate kinase; stru 92.6 0.64 2.2E-05 45.0 10.4 92 197-292 123-226 (233)
336 3pvs_A Replication-associated 91.0 0.3 1E-05 51.4 6.6 24 150-173 55-79 (447)
337 3pfi_A Holliday junction ATP-d 90.7 0.83 2.8E-05 44.7 9.1 25 149-173 59-84 (338)
338 3pqc_A Probable GTP-binding pr 89.9 0.26 8.8E-06 43.4 4.2 36 147-182 24-60 (195)
339 2gj8_A MNME, tRNA modification 89.9 0.21 7.1E-06 44.3 3.6 32 151-183 10-42 (172)
340 3h4m_A Proteasome-activating n 89.7 0.29 1E-05 46.7 4.7 19 149-167 55-73 (285)
341 2dyk_A GTP-binding protein; GT 89.4 0.18 6E-06 43.0 2.6 35 148-182 3-38 (161)
342 3c8u_A Fructokinase; YP_612366 89.0 0.19 6.7E-06 46.3 2.8 21 147-167 22-44 (208)
343 2qz4_A Paraplegin; AAA+, SPG7, 87.7 0.61 2.1E-05 43.6 5.3 18 150-167 44-61 (262)
344 1kag_A SKI, shikimate kinase I 87.6 0.26 9E-06 43.3 2.6 62 226-291 99-170 (173)
345 1mky_A Probable GTP-binding pr 87.4 0.25 8.4E-06 51.4 2.7 36 148-183 182-218 (439)
346 1svi_A GTP-binding protein YSX 87.4 0.28 9.7E-06 43.4 2.7 21 147-167 24-45 (195)
347 3q72_A GTP-binding protein RAD 87.3 0.24 8.3E-06 42.5 2.1 20 148-167 4-24 (166)
348 2erx_A GTP-binding protein DI- 87.2 0.23 7.9E-06 42.5 1.9 20 148-167 5-25 (172)
349 1lv7_A FTSH; alpha/beta domain 86.7 0.69 2.4E-05 43.6 5.1 19 149-167 49-67 (257)
350 3tif_A Uncharacterized ABC tra 86.3 0.4 1.4E-05 45.9 3.2 21 147-167 31-53 (235)
351 2ehv_A Hypothetical protein PH 86.2 0.37 1.3E-05 44.6 2.9 20 147-166 30-51 (251)
352 3tsz_A Tight junction protein 86.2 0.34 1.2E-05 50.2 2.9 38 403-446 215-257 (391)
353 1ye8_A Protein THEP1, hypothet 86.1 0.32 1.1E-05 44.6 2.4 18 150-167 5-22 (178)
354 2pcj_A ABC transporter, lipopr 85.9 0.47 1.6E-05 45.0 3.5 21 147-167 30-52 (224)
355 1bif_A 6-phosphofructo-2-kinas 85.7 4.9 0.00017 41.9 11.5 45 200-245 121-172 (469)
356 2yv5_A YJEQ protein; hydrolase 85.7 0.51 1.8E-05 46.7 3.8 21 147-167 165-187 (302)
357 3b9p_A CG5977-PA, isoform A; A 85.7 0.84 2.9E-05 43.8 5.2 19 149-167 58-76 (297)
358 4b4t_K 26S protease regulatory 85.6 0.53 1.8E-05 49.6 4.0 65 146-211 207-273 (428)
359 3lxx_A GTPase IMAP family memb 85.6 0.44 1.5E-05 44.6 3.1 20 148-167 31-51 (239)
360 2zej_A Dardarin, leucine-rich 85.5 0.35 1.2E-05 43.0 2.3 20 148-167 4-24 (184)
361 1htw_A HI0065; nucleotide-bind 85.5 0.39 1.3E-05 43.4 2.6 19 151-169 39-58 (158)
362 4b4t_J 26S protease regulatory 85.5 0.65 2.2E-05 48.7 4.6 68 144-211 181-249 (405)
363 1xwi_A SKD1 protein; VPS4B, AA 85.4 0.78 2.7E-05 45.6 5.0 24 144-167 44-67 (322)
364 2ged_A SR-beta, signal recogni 85.3 0.49 1.7E-05 41.9 3.1 20 148-167 50-70 (193)
365 1t9h_A YLOQ, probable GTPase E 85.2 0.24 8.1E-06 49.9 1.1 21 147-167 173-195 (307)
366 4a74_A DNA repair and recombin 85.1 0.43 1.5E-05 43.6 2.7 17 151-167 31-47 (231)
367 2f9l_A RAB11B, member RAS onco 85.0 0.38 1.3E-05 43.3 2.3 17 151-167 11-27 (199)
368 1m8p_A Sulfate adenylyltransfe 85.0 0.91 3.1E-05 49.4 5.6 133 151-292 402-565 (573)
369 3sop_A Neuronal-specific septi 84.9 0.4 1.4E-05 46.9 2.6 18 150-167 7-24 (270)
370 1oix_A RAS-related protein RAB 84.8 0.43 1.5E-05 43.0 2.5 17 151-167 35-51 (191)
371 4dhe_A Probable GTP-binding pr 84.7 0.36 1.2E-05 43.9 2.0 37 147-183 30-68 (223)
372 2wji_A Ferrous iron transport 84.6 0.43 1.5E-05 41.6 2.4 17 151-167 9-25 (165)
373 2rcn_A Probable GTPase ENGC; Y 84.6 0.57 2E-05 48.2 3.6 21 147-167 215-237 (358)
374 4g1u_C Hemin import ATP-bindin 84.6 0.56 1.9E-05 45.8 3.4 21 147-167 37-59 (266)
375 3q85_A GTP-binding protein REM 84.6 0.47 1.6E-05 40.8 2.6 20 148-167 4-24 (169)
376 1b0u_A Histidine permease; ABC 84.5 0.54 1.8E-05 45.8 3.2 21 147-167 32-54 (262)
377 1wf3_A GTP-binding protein; GT 84.3 0.51 1.7E-05 46.8 3.0 32 151-183 13-45 (301)
378 2fn4_A P23, RAS-related protei 84.1 0.58 2E-05 40.4 3.0 20 148-167 11-31 (181)
379 2bbw_A Adenylate kinase 4, AK4 84.0 0.54 1.8E-05 44.4 2.9 17 151-167 33-49 (246)
380 1g6h_A High-affinity branched- 84.0 0.58 2E-05 45.2 3.2 21 147-167 33-55 (257)
381 4dzz_A Plasmid partitioning pr 84.0 4.4 0.00015 36.2 8.9 42 151-221 8-50 (206)
382 1hqc_A RUVB; extended AAA-ATPa 83.9 2.6 8.9E-05 40.6 7.8 19 149-167 42-60 (324)
383 3eie_A Vacuolar protein sortin 83.8 0.54 1.9E-05 46.4 3.0 21 147-167 53-73 (322)
384 2nzj_A GTP-binding protein REM 83.8 0.5 1.7E-05 40.7 2.4 20 148-167 6-26 (175)
385 2wjg_A FEOB, ferrous iron tran 83.7 0.49 1.7E-05 41.6 2.4 32 151-183 13-44 (188)
386 1z2a_A RAS-related protein RAB 83.7 0.49 1.7E-05 40.3 2.3 20 148-167 7-27 (168)
387 1ky3_A GTP-binding protein YPT 83.7 0.68 2.3E-05 40.0 3.3 20 148-167 10-30 (182)
388 1pui_A ENGB, probable GTP-bind 83.6 0.31 1.1E-05 43.9 1.0 17 151-167 32-48 (210)
389 2pze_A Cystic fibrosis transme 83.5 0.64 2.2E-05 44.2 3.2 21 147-167 34-56 (229)
390 2ce2_X GTPase HRAS; signaling 83.5 0.55 1.9E-05 39.6 2.5 19 149-167 6-25 (166)
391 4b4t_L 26S protease subunit RP 83.5 0.75 2.6E-05 48.6 4.0 66 145-211 215-282 (437)
392 4dsu_A GTPase KRAS, isoform 2B 83.4 0.64 2.2E-05 40.5 3.0 20 148-167 6-26 (189)
393 2ff7_A Alpha-hemolysin translo 83.3 0.65 2.2E-05 44.8 3.2 17 151-167 41-57 (247)
394 3aez_A Pantothenate kinase; tr 83.3 0.53 1.8E-05 47.1 2.7 22 146-167 89-112 (312)
395 3ec2_A DNA replication protein 83.3 0.5 1.7E-05 42.2 2.2 17 151-167 44-60 (180)
396 1ji0_A ABC transporter; ATP bi 83.2 0.66 2.3E-05 44.4 3.2 21 147-167 32-54 (240)
397 1kao_A RAP2A; GTP-binding prot 83.2 0.54 1.8E-05 39.8 2.4 17 151-167 9-25 (167)
398 3gfo_A Cobalt import ATP-bindi 83.1 0.82 2.8E-05 45.1 3.9 21 147-167 34-56 (275)
399 2olj_A Amino acid ABC transpor 83.0 0.67 2.3E-05 45.3 3.2 21 147-167 50-72 (263)
400 1nij_A Hypothetical protein YJ 83.0 0.85 2.9E-05 45.3 4.0 17 151-167 10-26 (318)
401 2cbz_A Multidrug resistance-as 82.9 0.59 2E-05 44.7 2.8 17 151-167 37-53 (237)
402 3vfd_A Spastin; ATPase, microt 82.8 1.3 4.4E-05 44.9 5.4 19 149-167 152-170 (389)
403 3lxw_A GTPase IMAP family memb 82.8 0.64 2.2E-05 44.4 2.9 20 148-167 23-43 (247)
404 2qi9_C Vitamin B12 import ATP- 82.8 0.77 2.6E-05 44.5 3.5 17 151-167 32-48 (249)
405 1u8z_A RAS-related protein RAL 82.5 0.59 2E-05 39.6 2.3 20 148-167 6-26 (168)
406 3t5g_A GTP-binding protein RHE 82.5 0.76 2.6E-05 40.1 3.1 20 148-167 8-28 (181)
407 3cnl_A YLQF, putative uncharac 82.5 0.69 2.4E-05 45.1 3.1 35 148-183 101-137 (262)
408 2d2e_A SUFC protein; ABC-ATPas 82.5 0.65 2.2E-05 44.7 2.9 21 147-167 29-51 (250)
409 1g16_A RAS-related protein SEC 82.4 0.63 2.2E-05 39.7 2.5 20 148-167 5-25 (170)
410 3llu_A RAS-related GTP-binding 82.4 0.7 2.4E-05 41.5 2.9 20 148-167 22-42 (196)
411 1sgw_A Putative ABC transporte 82.4 0.71 2.4E-05 43.8 3.1 18 150-167 40-57 (214)
412 3fvq_A Fe(3+) IONS import ATP- 82.4 0.77 2.6E-05 47.3 3.5 21 147-167 30-52 (359)
413 2ixe_A Antigen peptide transpo 82.3 0.74 2.5E-05 45.1 3.2 17 151-167 51-67 (271)
414 1ek0_A Protein (GTP-binding pr 82.3 0.61 2.1E-05 39.7 2.3 17 151-167 9-25 (170)
415 2gf0_A GTP-binding protein DI- 82.3 0.5 1.7E-05 41.8 1.8 20 148-167 10-30 (199)
416 1ega_A Protein (GTP-binding pr 82.2 0.61 2.1E-05 46.0 2.6 31 151-183 14-46 (301)
417 1vpl_A ABC transporter, ATP-bi 82.2 0.76 2.6E-05 44.7 3.2 21 147-167 41-63 (256)
418 2x8a_A Nuclear valosin-contain 82.1 1.8 6.1E-05 42.1 5.9 22 146-167 45-66 (274)
419 1c1y_A RAS-related protein RAP 82.1 0.62 2.1E-05 39.6 2.3 17 151-167 9-25 (167)
420 2cxx_A Probable GTP-binding pr 82.0 0.69 2.4E-05 40.5 2.6 20 148-167 3-23 (190)
421 2onk_A Molybdate/tungstate ABC 81.9 0.69 2.4E-05 44.5 2.8 17 151-167 30-46 (240)
422 3tw8_B RAS-related protein RAB 81.9 0.61 2.1E-05 40.3 2.2 20 148-167 11-31 (181)
423 2qu8_A Putative nucleolar GTP- 81.9 0.56 1.9E-05 43.3 2.1 34 148-183 31-66 (228)
424 1sq5_A Pantothenate kinase; P- 81.9 0.75 2.6E-05 45.5 3.1 22 146-167 79-102 (308)
425 2ghi_A Transport protein; mult 81.8 0.69 2.4E-05 44.9 2.8 17 151-167 52-68 (260)
426 1z08_A RAS-related protein RAB 81.8 0.67 2.3E-05 39.7 2.4 17 151-167 12-28 (170)
427 2nq2_C Hypothetical ABC transp 81.7 0.82 2.8E-05 44.3 3.3 21 147-167 31-53 (253)
428 2zan_A Vacuolar protein sortin 81.7 1.7 5.7E-05 45.3 5.8 62 149-210 171-234 (444)
429 2zu0_C Probable ATP-dependent 81.7 0.72 2.5E-05 45.0 2.9 17 151-167 52-68 (267)
430 3clv_A RAB5 protein, putative; 81.6 0.66 2.2E-05 40.6 2.4 20 148-167 9-29 (208)
431 1puj_A YLQF, conserved hypothe 81.6 0.77 2.6E-05 45.2 3.1 33 151-183 126-158 (282)
432 1wms_A RAB-9, RAB9, RAS-relate 81.6 0.66 2.3E-05 40.1 2.4 17 151-167 13-29 (177)
433 1mv5_A LMRA, multidrug resista 81.6 0.76 2.6E-05 44.0 2.9 17 151-167 34-50 (243)
434 3iev_A GTP-binding protein ERA 81.6 0.63 2.2E-05 46.0 2.5 37 147-183 11-48 (308)
435 2y8e_A RAB-protein 6, GH09086P 81.6 0.71 2.4E-05 39.8 2.5 20 148-167 16-36 (179)
436 2i3b_A HCR-ntpase, human cance 81.5 0.71 2.4E-05 42.8 2.6 17 151-167 7-23 (189)
437 1z0j_A RAB-22, RAS-related pro 81.4 0.68 2.3E-05 39.5 2.4 17 151-167 12-28 (170)
438 2ihy_A ABC transporter, ATP-bi 81.4 0.83 2.8E-05 45.0 3.2 17 151-167 53-69 (279)
439 1jbk_A CLPB protein; beta barr 81.4 0.7 2.4E-05 39.9 2.4 18 150-167 48-65 (195)
440 1r8s_A ADP-ribosylation factor 81.3 0.69 2.4E-05 39.4 2.3 17 151-167 6-22 (164)
441 1np6_A Molybdopterin-guanine d 81.3 0.7 2.4E-05 42.5 2.5 17 151-167 12-28 (174)
442 2qp9_X Vacuolar protein sortin 81.3 0.69 2.4E-05 46.7 2.7 24 144-167 83-106 (355)
443 3dz8_A RAS-related protein RAB 81.3 1.1 3.9E-05 39.7 3.8 20 148-167 25-45 (191)
444 1m7b_A RND3/RHOE small GTP-bin 81.3 0.81 2.8E-05 40.4 2.8 20 148-167 9-29 (184)
445 1u0l_A Probable GTPase ENGC; p 81.2 0.9 3.1E-05 44.8 3.4 17 151-167 175-191 (301)
446 3cf0_A Transitional endoplasmi 81.2 1 3.5E-05 44.0 3.9 19 149-167 53-71 (301)
447 3bc1_A RAS-related protein RAB 81.0 0.71 2.4E-05 40.2 2.3 20 148-167 13-33 (195)
448 2gza_A Type IV secretion syste 80.9 1.2 4.1E-05 45.2 4.3 17 151-167 181-197 (361)
449 1rj9_A FTSY, signal recognitio 80.9 0.83 2.8E-05 45.6 3.0 22 146-167 101-124 (304)
450 2yz2_A Putative ABC transporte 80.9 0.9 3.1E-05 44.2 3.2 17 151-167 39-55 (266)
451 1r2q_A RAS-related protein RAB 80.8 0.74 2.5E-05 39.2 2.3 17 151-167 12-28 (170)
452 2xtp_A GTPase IMAP family memb 80.8 0.98 3.4E-05 42.6 3.4 20 148-167 24-44 (260)
453 4b4t_M 26S protease regulatory 80.8 0.8 2.7E-05 48.4 3.0 22 146-167 216-237 (434)
454 3ihw_A Centg3; RAS, centaurin, 80.5 0.76 2.6E-05 41.1 2.4 20 148-167 22-42 (184)
455 3b85_A Phosphate starvation-in 80.4 0.68 2.3E-05 43.6 2.1 31 434-466 135-165 (208)
456 2eyu_A Twitching motility prot 80.4 0.76 2.6E-05 44.7 2.5 17 151-167 31-47 (261)
457 1moz_A ARL1, ADP-ribosylation 80.4 0.67 2.3E-05 40.4 2.0 20 148-167 20-40 (183)
458 2lkc_A Translation initiation 80.3 0.96 3.3E-05 39.1 3.0 20 148-167 10-30 (178)
459 2cjw_A GTP-binding protein GEM 80.3 0.69 2.4E-05 41.7 2.1 20 148-167 8-28 (192)
460 1odf_A YGR205W, hypothetical 3 80.3 0.81 2.8E-05 45.3 2.7 17 151-167 37-53 (290)
461 1f6b_A SAR1; gtpases, N-termin 80.3 0.86 2.9E-05 41.2 2.7 20 148-167 27-47 (198)
462 3tui_C Methionine import ATP-b 80.3 0.95 3.3E-05 46.8 3.3 21 147-167 54-76 (366)
463 2hxs_A RAB-26, RAS-related pro 80.3 0.81 2.8E-05 39.6 2.4 17 151-167 12-28 (178)
464 3c5c_A RAS-like protein 12; GD 80.2 0.94 3.2E-05 40.4 2.9 20 148-167 23-43 (187)
465 2v9p_A Replication protein E1; 79.9 0.91 3.1E-05 45.7 3.0 17 151-167 132-148 (305)
466 1nrj_B SR-beta, signal recogni 79.9 0.71 2.4E-05 41.9 2.0 20 148-167 14-34 (218)
467 2yyz_A Sugar ABC transporter, 79.9 1 3.4E-05 46.3 3.3 21 147-167 29-51 (359)
468 2qnr_A Septin-2, protein NEDD5 79.9 0.83 2.8E-05 45.2 2.7 18 150-167 23-40 (301)
469 1l8q_A Chromosomal replication 79.8 1.4 4.9E-05 43.0 4.3 18 150-167 42-59 (324)
470 1upt_A ARL1, ADP-ribosylation 79.8 0.83 2.8E-05 39.1 2.3 20 148-167 9-29 (171)
471 2a9k_A RAS-related protein RAL 79.8 0.83 2.8E-05 39.6 2.3 20 148-167 20-40 (187)
472 1z47_A CYSA, putative ABC-tran 79.8 1 3.5E-05 46.3 3.3 21 147-167 41-63 (355)
473 2bme_A RAB4A, RAS-related prot 79.7 0.88 3E-05 39.7 2.5 20 148-167 12-32 (186)
474 2it1_A 362AA long hypothetical 79.7 1 3.5E-05 46.3 3.3 21 147-167 29-51 (362)
475 1fzq_A ADP-ribosylation factor 79.6 0.82 2.8E-05 40.6 2.3 20 148-167 18-38 (181)
476 3rlf_A Maltose/maltodextrin im 79.6 1 3.5E-05 46.7 3.3 21 147-167 29-51 (381)
477 1g29_1 MALK, maltose transport 79.5 1 3.6E-05 46.3 3.3 21 147-167 29-51 (372)
478 2iwr_A Centaurin gamma 1; ANK 79.4 0.79 2.7E-05 39.8 2.1 20 148-167 9-29 (178)
479 1z0f_A RAB14, member RAS oncog 79.4 0.87 3E-05 39.2 2.3 20 148-167 17-37 (179)
480 2p65_A Hypothetical protein PF 79.3 0.79 2.7E-05 39.8 2.1 18 150-167 48-65 (187)
481 1v43_A Sugar-binding transport 79.3 1.1 3.7E-05 46.3 3.3 21 147-167 37-59 (372)
482 2efe_B Small GTP-binding prote 79.2 0.9 3.1E-05 39.4 2.4 20 148-167 14-34 (181)
483 3kkq_A RAS-related protein M-R 79.2 0.88 3E-05 39.7 2.3 17 151-167 24-40 (183)
484 2oil_A CATX-8, RAS-related pro 79.2 0.86 2.9E-05 40.4 2.3 20 148-167 27-47 (193)
485 2q3h_A RAS homolog gene family 79.1 1.1 3.6E-05 40.1 2.9 20 148-167 22-42 (201)
486 3con_A GTPase NRAS; structural 79.1 0.89 3E-05 40.1 2.3 20 148-167 23-43 (190)
487 2bbs_A Cystic fibrosis transme 79.0 1 3.4E-05 44.8 2.9 21 147-167 64-86 (290)
488 3ice_A Transcription terminati 78.9 3 0.0001 44.1 6.6 72 149-220 178-278 (422)
489 2g6b_A RAS-related protein RAB 78.9 0.91 3.1E-05 39.3 2.3 20 148-167 12-32 (180)
490 1mh1_A RAC1; GTP-binding, GTPa 78.9 0.91 3.1E-05 39.4 2.3 20 148-167 7-27 (186)
491 3nh6_A ATP-binding cassette SU 78.9 0.77 2.6E-05 46.1 2.1 17 151-167 86-102 (306)
492 3tkl_A RAS-related protein RAB 78.9 0.91 3.1E-05 40.0 2.3 20 148-167 18-38 (196)
493 2w0m_A SSO2452; RECA, SSPF, un 78.9 1.1 3.7E-05 40.6 2.9 17 151-167 29-45 (235)
494 3tqc_A Pantothenate kinase; bi 78.7 1 3.4E-05 45.7 2.8 17 151-167 98-114 (321)
495 2g3y_A GTP-binding protein GEM 78.7 1.3 4.3E-05 41.5 3.4 20 148-167 39-59 (211)
496 1sxj_A Activator 1 95 kDa subu 78.6 5.7 0.0002 42.0 8.8 17 151-167 83-99 (516)
497 3gd7_A Fusion complex of cysti 78.6 1 3.6E-05 46.7 3.0 21 147-167 47-69 (390)
498 3b9q_A Chloroplast SRP recepto 78.5 0.96 3.3E-05 45.0 2.7 21 147-167 100-122 (302)
499 2bov_A RAla, RAS-related prote 78.5 0.95 3.2E-05 40.2 2.3 20 148-167 16-36 (206)
500 1zbd_A Rabphilin-3A; G protein 78.3 0.98 3.3E-05 40.3 2.4 20 148-167 10-30 (203)
No 1
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=100.00 E-value=4.2e-60 Score=484.93 Aligned_cols=293 Identities=56% Similarity=0.867 Sum_probs=223.4
Q ss_pred CcCC-CCccchhhhHHHhHHHHHHHHHHHhhhccCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCc
Q psy6613 11 SQPS-SDLSLDEEKETLRREKERQALSQLEKARAKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNW 89 (510)
Q Consensus 11 ~~~~-~d~~~~~~~~~~~~~~~~~a~~~L~~a~~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~W 89 (510)
|||| ||+|+|+|.|++|+|+|++|+.||++|+.|++.+||||+|||+|..|+++||++++|+|++||||+|+++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~W 80 (337)
T 4dey_A 1 SRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDW 80 (337)
T ss_dssp ----------CTTGGGHHHHHHHHHHHHHHHTSSSCCCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSE
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHHhhhhccCCCccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCe
Confidence 6899 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEccCCCceeeecChhHHHHHHHHhhhcc-CCCcccccC--C-CCCCCC-CCCCCCCCCCCeE-EecCcCChHH---
Q psy6613 90 WIGRLVKEGSECGFIPSPVKLENLRLQQTQAR-NPKLYSSKT--S-STSNLG-ALSSDAPSPGMII-ITRVTADISL--- 160 (510)
Q Consensus 90 Wqar~v~~~~~~GlIPS~~~~Errr~~~~~kk-~~~l~~sk~--~-s~~~~~-~~~~d~Ps~~RpI-~GPsGvGKsT--- 160 (510)
|+||+++++|..|||||+.++|+++..+.++. +..+..++. . ...+.. .-+..+|+.+-+| +||++.|-.+
T Consensus 81 Wqar~~~~~g~~GlIPS~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~Ye~vp~~RPvvlvGP~~~g~~~td~ 160 (337)
T 4dey_A 81 WIGRLVKEGCEIGFIPSPVKLENMRLQHEQRAKEFKLHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYEVTDM 160 (337)
T ss_dssp EEEEESSTTCCCEEEECHHHHHHHHHHHHHHCC-------------------CCSEEEECSSCCEEEECSSCTTSHHHHH
T ss_pred EEEEECCCCCCccEecCHHHHHHHHHhhhhccccCCCCcccccccccccCCCCCCccccCCCCceEEECCccccchhHHH
Confidence 99999987788999999999999988765421 111100000 0 001100 0112236554444 9999999874
Q ss_pred HHHHHhc-CCCCceeeecCCCchh-------------------hhhhh--------cccHHHHHHHHHcCCeEEEEeccC
Q psy6613 161 AKRSLMS-NPSKRAIMERSNSRSS-------------------VLTEV--------QTEIERVYELASTLQLVVLDCDTI 212 (510)
Q Consensus 161 L~~rLL~-~P~~F~~sVshTTR~p-------------------Fe~~I--------~TslesI~~vi~sGKi~ILDID~q 212 (510)
+.+.|+. .+.+|...|++| |.+ |+..+ ++.+++|.++.++|++||||||+|
T Consensus 161 m~~~l~d~l~~~F~~~i~~t-R~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~~~ev~seVe~i~~v~~~Gk~vILDIDvQ 239 (337)
T 4dey_A 161 MQKALFDFLKHRFEGRISIT-RVTADISLAKRSVLNNPSKHAIIERSNTRSSLAEVQSEIERIFELARTLQLVVLDADTI 239 (337)
T ss_dssp HHHHHHHHHHHHTTTSEEEE-EECSCGGGC-------------------CCCHHHHHHHHHHHHHHTTTCCEEEEEETTC
T ss_pred HHHHHHHhhHHhcCCccceE-eecchhhhcchhhhhcccchhhhcccccccchHHHHhHHHHHHHHHhCCCEEEEEeCcH
Confidence 4556766 667777777665 333 33222 268888999999999999999999
Q ss_pred -CchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCCCHHHHHHHHHHH
Q psy6613 213 -NHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDENQLEDACEHIAEY 290 (510)
Q Consensus 213 -g~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvNDdLd~A~~eL~~i 290 (510)
| ++.++. .++|++|||+|||+++|++||++||++..+.+.++|+.++++.+++.+.|||||+||||+.||++|.+|
T Consensus 240 nG--a~qlk~~~~~~i~IFI~PPS~eeLe~RL~~RGt~~~~rl~~al~~ae~E~~~~~~~FDyvIVNDdLe~A~~~L~~i 317 (337)
T 4dey_A 240 NH--PAQLSKTSLAPIVVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDACEHLADY 317 (337)
T ss_dssp CS--GGGTTTSSCCCEEEEECCSCHHHHHHHHHTTCHHHHTTHHHHHHHHHHHHHSCGGGCSEEECCSSHHHHHHHHHHH
T ss_pred HH--HHHHHhcCCCCEEEEEECcCHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhCcccCCEEEECCCHHHHHHHHHHH
Confidence 9 666666 789999999999999999999999986666666666555555566789999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCC
Q psy6613 291 LEAYWRATHPPAAPPQ 306 (510)
Q Consensus 291 leai~~a~h~p~~~p~ 306 (510)
|++||++.|+|...|+
T Consensus 318 I~~~~~~~h~~~~~~~ 333 (337)
T 4dey_A 318 LEAYWKATHPPSSNLP 333 (337)
T ss_dssp HHHHHHHHSCCC----
T ss_pred HHHHHhccCCCCCCCC
Confidence 9999999999988876
No 2
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=100.00 E-value=1.7e-53 Score=429.51 Aligned_cols=240 Identities=19% Similarity=0.292 Sum_probs=182.3
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCC---ceeeecChhHHHHHHHHhhhcc
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGS---ECGFIPSPVKLENLRLQQTQAR 121 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~---~~GlIPS~~~~Errr~~~~~kk 121 (510)
..+|||||||||+|..|+.+||+ ||+|++||||||++++|++||||+++++++ .+|||||+.++|++...+....
T Consensus 3 ~~s~yvRa~fdY~~~~D~~~P~~--gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~~~~~~~ 80 (292)
T 3tvt_A 3 KRSLYVRALFDYDPNRDDGLPSR--GLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSV 80 (292)
T ss_dssp --CCEEEECSCBCC-----------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHHHHHHHHHC-----
T ss_pred CceEEEEEeccCCCCCCCCCCCC--cCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChHHHHHHHHHhhccc
Confidence 35899999999999999999998 799999999999999999999999986554 5899999999998854322110
Q ss_pred C--C--CcccccCCCCCCCCCCCCCCCCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------
Q psy6613 122 N--P--KLYSSKTSSTSNLGALSSDAPSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----------- 183 (510)
Q Consensus 122 ~--~--~l~~sk~~s~~~~~~~~~d~Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----------- 183 (510)
+ . ..|+.. ....|+++||| +|| ||+||+++|++ +|+.|.++||||||+|
T Consensus 81 ~~~~~~~~YE~V----------~~~~~~~~RpvVl~Gp---~K~tl~~~Ll~~~p~~f~~sVs~TTR~pR~gE~dG~dY~ 147 (292)
T 3tvt_A 81 KSEENVLSYEAV----------QRLSINYTRPVIILGP---LKDRINDDLISEYPDKFGSCVPHTTRPKREYEVDGRDYH 147 (292)
T ss_dssp -----CCCEEEE----------EEEECSSCCCEEEEST---THHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBTTTBE
T ss_pred cccccccchheE----------EeccCCCCCeEEEeCC---CHHHHHHHHHHhChhhccccccCCccCCcCCccCCcccc
Confidence 0 0 001110 01126778876 888 49999999999 9999999999999988
Q ss_pred -------hhhhhc----------------ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHH
Q psy6613 184 -------VLTEVQ----------------TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQ 239 (510)
Q Consensus 184 -------Fe~~I~----------------TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~ 239 (510)
|++++. |++++|++++++|++||||||++| ++.++. .++|++|||+|||+++|+
T Consensus 148 Fv~s~e~fe~~i~~~~flE~a~~~gn~YGT~~~~V~~~~~~gk~viLdid~qg--~~~lk~~~~~pi~IFI~PpS~e~L~ 225 (292)
T 3tvt_A 148 FVSSREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNA--IKRLQVAQLYPVAVFIKPKSVDSVM 225 (292)
T ss_dssp ECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHHTCEEEECCCTHH--HHHHHHTTCCCEEEEECCSCHHHHH
T ss_pred ccCCHHHHHHHHhcCceEEEEEEccceeEEehHHHHHHHHcCCcEEEeccchh--hhhcccccccceEEEEECCCHHHHH
Confidence 444432 999999999999999999999999 777776 899999999999999999
Q ss_pred HHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy6613 240 RLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDENQLEDACEHIAEYLEAYWRATHPPAAPPQP 307 (510)
Q Consensus 240 ~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvNDdLd~A~~eL~~ileai~~a~h~p~~~p~~ 307 (510)
+|+++|++++.+.+..|+ .++++.++|+||+||+||||++||++|++ .|.....+++|+|+.
T Consensus 226 ~r~~~r~~e~~~~~~~r~---~k~e~e~~~~fD~vIvNddle~a~~~l~~---iI~~e~~~~~WVP~~ 287 (292)
T 3tvt_A 226 EMNRRMTEEQAKKTYERA---IKMEQEFGEYFTGVVQGDTIEEIYSKVKS---MIWSQSGPTIWVPSK 287 (292)
T ss_dssp HTCTTSCTTHHHHHHHHH---HHHHHHHTTTCSEEECCSSHHHHHHHHHH---HHHHHTCSEEEEEC-
T ss_pred HHHhCCCchhHHHHHHHH---HHHHHhhhhhCCEEEECcCHHHHHHHHHH---HHHHhhCCCeEecCc
Confidence 999999887665555444 44566667999999999999999999993 445568999999985
No 3
>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A
Probab=100.00 E-value=9e-48 Score=393.83 Aligned_cols=169 Identities=69% Similarity=0.988 Sum_probs=109.7
Q ss_pred CCCC-CCCChhHhHHHHHHHHHHHHHHHHHHhccC-----------------------------------------CCCC
Q psy6613 338 SQPS-SDLSLDEEKETLRREKERQALSQLEKARVT-----------------------------------------DDNE 375 (510)
Q Consensus 338 s~ps-~~~s~~~~~~~~~~~~e~~a~~~l~~a~~~-----------------------------------------~~~~ 375 (510)
+||| ||+|+|||+|++|||+|+||+.|||+|+++ |++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~k~~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~W 80 (337)
T 4dey_A 1 SRPSDSDVSLEEDREAVRREAERQAQAQLEKAKTKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDW 80 (337)
T ss_dssp ----------CTTGGGHHHHHHHHHHHHHHHTSSSCCCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSE
T ss_pred CCCCccccchhhHHHHHHHHHHHHHHHhhhhccCCCccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCe
Confidence 5899 999999999999999999999999999995 2357
Q ss_pred CCccccC--C-CCccCCC-------------------ChhhhhhhcccccCCCCCccccCCCcceEEeCCCCCCchhHHH
Q psy6613 376 SIGNSRA--G-KNTLTTP-------------------TTKEKKKIFFKKQETTTPYDVVPSMRPVVLVGPSLKGYEVTDM 433 (510)
Q Consensus 376 ~~~~~~~--~-~~~~~~~-------------------~~~~~~~~~~~~~~~~~~y~~~p~~rp~~~~gp~~~~~~~~~~ 433 (510)
|.|+... | .+.+++| +++.|+|+||+|+++++||+|||+|||||||||+++|||||||
T Consensus 81 Wqar~~~~~g~~GlIPS~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~Ye~vp~~RPvvlvGP~~~g~~~td~ 160 (337)
T 4dey_A 81 WIGRLVKEGCEIGFIPSPVKLENMRLQHEQRAKEFKLHSKEKRMPFFKKTEHTPPYDVVPSMRPVVLVGPSLKGYEVTDM 160 (337)
T ss_dssp EEEEESSTTCCCEEEECHHHHHHHHHHHHHHCC-------------------CCSEEEECSSCCEEEECSSCTTSHHHHH
T ss_pred EEEEECCCCCCccEecCHHHHHHHHHhhhhccccCCCCcccccccccccCCCCCCccccCCCCceEEECCccccchhHHH
Confidence 8775421 1 1111111 2456788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCcEEEEEEecchhhHHhhccCCccccccccccCCCcchhHHHHHHHHHHHHHhhcccccc
Q psy6613 434 MQKALFDFLKHRFEGRIIITRVTADISLAKRSLMSNPSKRAIMERSNSRSSVLTEVQTEIERVYELASTLQVYY 507 (510)
Q Consensus 434 m~~al~~~l~~~f~~~i~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~i~~~~~~~~l~~ 507 (510)
|||||||||+|||+|+|.||||++||++|||+.++|+.|+++||+++.+++ +.||++|||||++++++-+.|+
T Consensus 161 m~~~l~d~l~~~F~~~i~~tR~~~d~~~~~r~~~~~~~~~~~~e~~~~~~~-~~ev~seVe~i~~v~~~Gk~vI 233 (337)
T 4dey_A 161 MQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTRSS-LAEVQSEIERIFELARTLQLVV 233 (337)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEECSCGGGC-------------------CCC-HHHHHHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHhhHHhcCCccceEeecchhhhcchhhhhcccchhhhcccccccc-hHHHHhHHHHHHHHHhCCCEEE
Confidence 999999999999999999999999999999999999999999999998877 8999999999999998766553
No 4
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=100.00 E-value=1.9e-45 Score=370.57 Aligned_cols=241 Identities=22% Similarity=0.309 Sum_probs=194.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCC---CceeeecChhHHHHHHHHhhhccCC
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEG---SECGFIPSPVKLENLRLQQTQARNP 123 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~---~~~GlIPS~~~~Errr~~~~~kk~~ 123 (510)
+|||||+|||++..|+.+| +.+|+|++||||+|+++.|++||+|++++++ +..|+|||+.++|++...+.. .
T Consensus 1 s~~vrAlydy~~~~~~~~p--~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~~~~~~~~---~ 75 (295)
T 1kjw_A 1 GFYIRALFDYDKTKDCGFL--SQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRLK---A 75 (295)
T ss_dssp CEEEEESSCBCHHHHHCCC--SSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHHHHHTSCC----
T ss_pred CEEEEEeeccCCCCCCCCC--CcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHHHHHhhhc---c
Confidence 4899999999999998888 6789999999999999999999999998654 378999999999987654221 1
Q ss_pred CcccccCCCCCCCCCCCCCC----------CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-------
Q psy6613 124 KLYSSKTSSTSNLGALSSDA----------PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS------- 183 (510)
Q Consensus 124 ~l~~sk~~s~~~~~~~~~d~----------Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p------- 183 (510)
..+.+++ +.......+ |.++||| +|| ||+||+++|++ +|+.|.++||||||+|
T Consensus 76 ~~~~~~~----~~~~~~~~~~~Ye~V~~~~~~~~r~ivl~GP---gK~tl~~~L~~~~~~~~~~~vs~TTR~~R~gE~~G 148 (295)
T 1kjw_A 76 KDWGSSS----GSQGREDSVLSYETVTQMEVHYARPIIILGP---TKDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDG 148 (295)
T ss_dssp --CCSCC----SSCCCCCCCCCEEEEEEEECCSCCCEEEEST---THHHHHHHHHHHCTTTEECCCCEECSCCCTTCCBT
T ss_pred cccCccc----ccccccCCCCCcceeeeecCCCCCEEEEECC---CHHHHHHHHHhhCccceeeeeeecccCCCCccccC
Confidence 1122211 111111111 4567776 898 79999999999 9989999999999987
Q ss_pred -----------hhhhhc----------------ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCH
Q psy6613 184 -----------VLTEVQ----------------TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSP 235 (510)
Q Consensus 184 -----------Fe~~I~----------------TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~ 235 (510)
|++++. |+++.|++++++|++||||+|++| ++.++. .+.|++|||+|||+
T Consensus 149 ~dY~Fv~s~eef~~~i~~g~flE~~~~~g~~YGt~~~~V~~~~~~G~~vildid~~g--~~~l~~~~~~pi~IfI~pps~ 226 (295)
T 1kjw_A 149 RDYHFVSSREKMEKDIQAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANA--VRRLQAAHLHPIAIFIRPRSL 226 (295)
T ss_dssp TTBEECSCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHHHHHHTTCEEEECCCTTH--HHHHHHTTCCCEEEEECCSSH
T ss_pred ceeEecCCHHHHHHHHHCCCcEEEEEEcCcEeeeeHHHHHHHHhcCCeEEEEeCHHH--HHHHHhcccCCeEEEEECCCH
Confidence 444432 999999999999999999999999 777765 78899999999999
Q ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy6613 236 KVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDENQLEDACEHIAEYLEAYWRATHPPAAPPQP 307 (510)
Q Consensus 236 e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvNDdLd~A~~eL~~ileai~~a~h~p~~~p~~ 307 (510)
++|++ |++||++ +++.+||+.+.+++..+.+.||+||+|||+++|+++|.++| ....++|+|+|.+
T Consensus 227 ~~L~~-L~~R~t~--~~i~~rl~~a~~~e~~~~~~fd~vivNd~le~a~~~l~~ii---~~~~~~~~Wvp~~ 292 (295)
T 1kjw_A 227 ENVLE-INKRITE--EQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVI---EDLSGPYIWVPAR 292 (295)
T ss_dssp HHHHH-HCTTSCH--HHHHHHHHHHHHHHHHHGGGCSEEECCSSHHHHHHHHHHHH---HHHSCSEEEEECS
T ss_pred HHHHH-HHhcCCH--HHHHHHHHHHHHHHHhccccCeEEEECcCHHHHHHHHHHHH---HhccCCCEEeeCC
Confidence 99999 8888865 56778886665566666789999999999999999999554 4568999999985
No 5
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=100.00 E-value=2.1e-45 Score=391.50 Aligned_cols=275 Identities=15% Similarity=0.175 Sum_probs=206.6
Q ss_pred CCCccchhhhHHHhHHHHHHHHHHHhhh--c--------------------cCCCeeEEEEeeccCCCCCCCCCCCCccc
Q psy6613 14 SSDLSLDEEKETLRREKERQALSQLEKA--R--------------------AKNVAFAVRTNVKYDGSIDDDSPVHGYAV 71 (510)
Q Consensus 14 ~~d~~~~~~~~~~~~~~~~~a~~~L~~a--~--------------------~k~~~~~VRAlfdY~~~~D~~iPc~e~~L 71 (510)
.+|++++-|+..+++.+..++...|... . .....|||||+|||++..+ .+|
T Consensus 43 ~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~~~~~~~~~~~g~s~yVralfdy~~~~~-------~~L 115 (468)
T 3shw_A 43 EGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESP-------YGL 115 (468)
T ss_dssp TTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHHHHHHHTCCCCEEEEECSCBCCSST-------TBC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCccchhhhccccccccccccccCcCCCCC-------CCc
Confidence 3899999999998876666666666551 1 2356899999999999763 479
Q ss_pred cccCCceEEEEee---cCCCceEEEEccCCC---ceeeecChhHHHHHHHHhhhc-c-----CCCc------ccccCC--
Q psy6613 72 SFDIHEFLHIKEK---YDSNWWIGRLVKEGS---ECGFIPSPVKLENLRLQQTQA-R-----NPKL------YSSKTS-- 131 (510)
Q Consensus 72 sF~~GDiL~V~~~---~d~~WWqar~v~~~~---~~GlIPS~~~~Errr~~~~~k-k-----~~~l------~~sk~~-- 131 (510)
+|++||||||+++ .|.+||+|++++.++ +.|+|||+.++|++...+... + +..+ ..+++.
T Consensus 116 sF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e~~~~~~~~~~~~~~~~~~~f~~~~~~r~~kk~~~ 195 (468)
T 3shw_A 116 SFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLR 195 (468)
T ss_dssp CBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHHHHHHHHHC--------------------------
T ss_pred eEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHHHHHHHhhhhhccccccccchhhhccccccccccc
Confidence 9999999999999 678999999987755 689999999999985432210 0 0000 001100
Q ss_pred -C--CCCCCCCCCCC----------CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhhhhhc------
Q psy6613 132 -S--TSNLGALSSDA----------PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTEVQ------ 189 (510)
Q Consensus 132 -s--~~~~~~~~~d~----------Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~I~------ 189 (510)
+ ..+..++..++ |+++||| +||||+| |+++|++ +|+.|.. +||| |...++.
T Consensus 196 ~~~~~~~~~~~~~~~~~YEeV~~~~~~~~r~iVlsGPsG~G---l~~~Ll~~~p~~f~s---~~TR-pR~gE~dG~~Y~F 268 (468)
T 3shw_A 196 KSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPIADV---AREKLAREEPDIYQI---AKSE-PRDAGTDQRSSGI 268 (468)
T ss_dssp -----------CCCCCSEEEEEEECCSSCCCEEEESTTHHH---HHHHHHHHCTTTEEE---CCCB-C----------CB
T ss_pred cchhhcccccccccCCCcceeEcccCCCCCEEEEECCCHHH---HHHHHHHhCCCceee---ecCC-CCCcccccccCCc
Confidence 0 01111222222 5678876 9999999 9999999 9998876 3689 6344332
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCC
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQ 268 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~ 268 (510)
|++++|++++++||+||||||+|| ++.++. .++|++|||+|||+++|+++++.+++++++.+.++++++.+||+.|+
T Consensus 269 Ts~~~V~~vl~~Gk~~iLdId~qg--~~~l~~~~~~p~~IFI~PPS~e~L~~~~~rl~~~see~~~r~~~~a~~~e~~~~ 346 (468)
T 3shw_A 269 IRLHTIKQIIDQDKHALLDVTPNA--VDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNH 346 (468)
T ss_dssp CCHHHHHHHHTTTCEEEECCCHHH--HHHHHHTTCCCEEEEEECSCHHHHHHHHHHHCTTCCCCHHHHHHHHHHHHHHHG
T ss_pred ccHHHHHHHHHCCCeEEEEeCHHH--HHHHHhcCCCCEEEEEeCcCHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999 888887 88999999999999999987666666666655555588888998889
Q ss_pred CCccEEEeCCCH-HHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy6613 269 EMFDVILDENQL-EDACEHIAEYLEAYWRATHPPAAPPQP 307 (510)
Q Consensus 269 ~~FD~VIvNDdL-d~A~~eL~~ileai~~a~h~p~~~p~~ 307 (510)
|+|||||+|||+ +.||++|+++ |.....+|+|+|..
T Consensus 347 ~~fD~vIvNddl~d~a~~~L~~i---i~~~~~~~~WvP~~ 383 (468)
T 3shw_A 347 HLFTTTINLNSMNDGWYGALKEA---IQQQQNQLVWVSEG 383 (468)
T ss_dssp GGCSEEEECBTTBCHHHHHHHHH---HHHHHTSCEEEEC-
T ss_pred ccCCEEEECCCcHHHHHHHHHHH---HHHhcCCCEEeCCc
Confidence 999999999999 5999999944 44567899999993
No 6
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-44 Score=361.93 Aligned_cols=244 Identities=16% Similarity=0.220 Sum_probs=179.0
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCC---------ceEEEEccCCC---ceeeecChhHHHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSN---------WWIGRLVKEGS---ECGFIPSPVKLEN 112 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~---------WWqar~v~~~~---~~GlIPS~~~~Er 112 (510)
+.+|||||||||++..+ .+|+|++||||||+++.+++ ||+|++++.++ ..|+|||+.++|+
T Consensus 2 gdsfyVRalfdy~~~~~-------~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~aeq 74 (308)
T 3kfv_A 2 GDSFYIRTHFELEPSPP-------SGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAEQ 74 (308)
T ss_dssp -CCEEEEECSCBCCCSS-------SBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHHH
T ss_pred CccEEEEEecCcCCCCc-------ccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHHH
Confidence 46899999999999754 47999999999999998776 99999987654 7899999999998
Q ss_pred HHHHhh-hcc-------------CCCccc-------ccCCCCCCCCCCC------CCC----------CCCCCeE--Eec
Q psy6613 113 LRLQQT-QAR-------------NPKLYS-------SKTSSTSNLGALS------SDA----------PSPGMII--ITR 153 (510)
Q Consensus 113 rr~~~~-~kk-------------~~~l~~-------sk~~s~~~~~~~~------~d~----------Ps~~RpI--~GP 153 (510)
+...+. +.. +..++. .|... .+...+. .++ |++.||| +||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~r~~f~~~~~~r~~~k~~~-~~~~~d~~~~~~~~~~~~YE~V~~~~~~~~RPvVl~GP 153 (308)
T 3kfv_A 75 LASLEAAQRAVGVGPGSSAGSNARAEFWRLRGLRRGAKKTT-QRSREDLSALTRQGRYPPYERVVLREASFKRPVVILGP 153 (308)
T ss_dssp HHHHHHHHCC------------------------------------CCCHHHHHHHTCCSEEEEEEEECSSCCCEEEEST
T ss_pred HHHHHHhhhhcccccccccccccccchhhhccccccccccc-cccccccccccccCCCcCchheeccccCCCCeEEEeCc
Confidence 833211 100 001111 11100 0000110 011 5677877 899
Q ss_pred CcCChHHHHHHHhc-CCCCceeeecCCCchhhhhhhcccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEe
Q psy6613 154 VTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTEVQTEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLK 231 (510)
Q Consensus 154 sGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~I~TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIk 231 (510)
+|++|+++|++ +|++|+++||. +|.- ...-.+++++|++++++|++||||||+|| ++.++. .++|++|||+
T Consensus 154 ---~k~~l~~~L~~~~P~~F~~~v~~-~r~i-~~~~fis~~~V~~vl~~Gk~~ILDId~QG--a~~lk~~~~~pi~IFI~ 226 (308)
T 3kfv_A 154 ---VADIAMQKLTAEMPDQFEIAETV-SRTD-SPSKIIKLDTVRVIAEKDKHALLDVTPSA--IERLNYVQYYPIVVFFI 226 (308)
T ss_dssp ---THHHHHHHHHHHCTTTEEECCCC----------CCCHHHHHHHHHTTCEEEECCCHHH--HHHHHHTTCCCEEEEEE
T ss_pred ---cHHHHHHHHHHhCcccccccccc-cccc-cCCCeecHHHHHHHHHCCCcEEEEECHHH--HHHHHhcCCCCEEEEEe
Confidence 69999999999 99999999994 4431 11112799999999999999999999999 888876 8899999999
Q ss_pred CCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCCCCccEEE-eCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy6613 232 ISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQEMFDVIL-DENQLEDACEHIAEYLEAYWRATHPPAAPPQP 307 (510)
Q Consensus 232 PPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~~~FD~VI-vNDdLd~A~~eL~~ileai~~a~h~p~~~p~~ 307 (510)
|||+++|++|+..+++++++ +.+|| +++.+||..|+++||||| +|||+|.||++|+++| ...++.|+|+|..
T Consensus 227 PPS~eeL~~rr~R~~~esee-~~~r~~~aa~eiE~~~~~~FD~vI~VNDdle~A~~~L~~iI---~~~~~epqWvp~~ 300 (308)
T 3kfv_A 227 PESRPALKALRQWLAPASRR-STRRLYAQAQKLRKHSSHLFTATIPLNGTSDTWYQELKAII---REQQTRPIWTAED 300 (308)
T ss_dssp ESCHHHHHHHHHHHSTTCCC-CHHHHHHHHHHHHHHHGGGCSEEEEECSSSTHHHHHHHHHH---HHHTTSEEEEEC-
T ss_pred CCCHHHHHHHHhcCCCCCHH-HHHHHHHHHHHHHHhhhccCcEEEEcCCCHHHHHHHHHHHH---HHhcCCCeEeehh
Confidence 99999999975444555555 44566 878889988889999999 9999999999999444 5579999999984
No 7
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=100.00 E-value=1.2e-44 Score=377.66 Aligned_cols=274 Identities=15% Similarity=0.186 Sum_probs=204.9
Q ss_pred CCCccchhhhHHHhHHHHHHHHHHHhh--hc--------------------cCCCeeEEEEeeccCCCCCCCCCCCCccc
Q psy6613 14 SSDLSLDEEKETLRREKERQALSQLEK--AR--------------------AKNVAFAVRTNVKYDGSIDDDSPVHGYAV 71 (510)
Q Consensus 14 ~~d~~~~~~~~~~~~~~~~~a~~~L~~--a~--------------------~k~~~~~VRAlfdY~~~~D~~iPc~e~~L 71 (510)
.+|++++-|+..++..+..++...|.. +. .....|||||+|||++.++ .+|
T Consensus 51 ~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~~~~~~~~~~~~~~~vral~dy~~~~~-------~~L 123 (391)
T 3tsz_A 51 EGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDVYRRIVESDVGDSFYIRTHFEYEKESP-------YGL 123 (391)
T ss_dssp TTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHHHGGGTSSCCSCCEEEEECSCBCCSST-------TBC
T ss_pred CCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcccccccccccccccccccccccCCCCC-------Ccc
Confidence 389999999999987666777777764 11 1346899999999999644 379
Q ss_pred cccCCceEEEEee---cCCCceEEEEccCCC---ceeeecChhHHHHHHHHhhhc-c-----CCC------cccccCC--
Q psy6613 72 SFDIHEFLHIKEK---YDSNWWIGRLVKEGS---ECGFIPSPVKLENLRLQQTQA-R-----NPK------LYSSKTS-- 131 (510)
Q Consensus 72 sF~~GDiL~V~~~---~d~~WWqar~v~~~~---~~GlIPS~~~~Errr~~~~~k-k-----~~~------l~~sk~~-- 131 (510)
+|++||||+|+++ .|.+||+|++++.++ +.|+|||+.++|++...+... + +.. +..++..
T Consensus 124 sf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 203 (391)
T 3tsz_A 124 SFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQLASVQYTLPKTAGGDRADFWRFRGLRSSKRNLR 203 (391)
T ss_dssp CBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHHHHSSCCC--------------------------
T ss_pred eEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 9999999999999 688999999987643 589999999999985432110 0 000 0001100
Q ss_pred -CCC--CCCCCCCCC----------CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhhhhhc------
Q psy6613 132 -STS--NLGALSSDA----------PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTEVQ------ 189 (510)
Q Consensus 132 -s~~--~~~~~~~d~----------Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~I~------ 189 (510)
+.. +..++..++ |+++||| +|||| +||+++|++ +|+.|.. |||+|...++.
T Consensus 204 k~~~~~~~~~~~~~~~~YE~V~~~~~~~~r~iVlsGPsg---~tl~~~L~~~~p~~~~~----~tr~pR~gE~dG~~Y~F 276 (391)
T 3tsz_A 204 KSREDLSAQPVQTKFPAYERVVLREAGFLRPVTIFGPIA---DVAREKLAREEPDIYQI----AKSEPRDAGTDQRSSGI 276 (391)
T ss_dssp -------------CCCSEEEEEEEECSSCCCEEEESTTH---HHHHHHHHHHCTTTEEE----CCCCCCCSSSCCC--CC
T ss_pred ccccccccccccccCCCcceEECcCCCCCCEEEEECCCH---HHHHHHHHhhCcccccc----ccCCCCCcccCCccCCc
Confidence 000 111111222 5677876 99998 899999999 9998875 57777333322
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCC
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQ 268 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~ 268 (510)
+++++|++++++|++||||||+|| ++.++. .++|++|||+|||+++|++|++.+++++++.+.++++++.+||+.|+
T Consensus 277 v~~~~V~~~~~~Gk~~iLdId~qg--~~~l~~~~~~p~~IFI~PPS~~~L~~~~~r~~~~s~e~~~~~~~~a~~~e~~~~ 354 (391)
T 3tsz_A 277 IRLHTIKQIIDQDKHALLDVTPNA--VDRLNYAQWYPIVVFLNPDSKQGVKTMRMRLCPESRKSARKLYERSHKLRKNNH 354 (391)
T ss_dssp CCHHHHHHHHTTTCEEEECCCHHH--HHHHHHTTCCCEEEEEECCCHHHHHHHHHHHCSSCCCCHHHHHHHHHHHHHHHG
T ss_pred CcHHHHHHHHHcCCEEEEEeCHHH--HHHHHhCCCCCEEEEEeCcCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999 888887 88999999999999999997554455555555545588889998888
Q ss_pred CCccEEEeCCCHH-HHHHHHHHHHHHHHHhcCCCCCCCC
Q psy6613 269 EMFDVILDENQLE-DACEHIAEYLEAYWRATHPPAAPPQ 306 (510)
Q Consensus 269 ~~FD~VIvNDdLd-~A~~eL~~ileai~~a~h~p~~~p~ 306 (510)
|+|||||+|||++ .||++|+++| ...+++|+|+|.
T Consensus 355 ~~fd~vivNd~l~~~a~~~l~~ii---~~~~~~~~Wvp~ 390 (391)
T 3tsz_A 355 HLFTTTINLNSMNDGWYGALKEAI---QQQQNQLVWVSE 390 (391)
T ss_dssp GGCSEEEECCTTCCHHHHHHHHHH---HHHHHSEEEEEC
T ss_pred ccCcEEEECCCcHHHHHHHHHHHH---HHhcCCCeeccC
Confidence 9999999999998 7999999444 556789999984
No 8
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-43 Score=392.33 Aligned_cols=277 Identities=22% Similarity=0.294 Sum_probs=217.2
Q ss_pred CCccchhhhHHHhHHHHHHHHHHHhhhc------------------------------------------cCCCeeEEEE
Q psy6613 15 SDLSLDEEKETLRREKERQALSQLEKAR------------------------------------------AKNVAFAVRT 52 (510)
Q Consensus 15 ~d~~~~~~~~~~~~~~~~~a~~~L~~a~------------------------------------------~k~~~~~VRA 52 (510)
+|++++-|+..+++.+-.++...|..+. .....|||||
T Consensus 353 GD~Il~VNg~~v~~~~~~e~~~~l~~~~~~v~L~v~r~~~~~~~~~~~~~~~~~~~~~~s~~~g~~~~~~~~~~~~~vrA 432 (721)
T 2xkx_A 353 GDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPEEYSRFEAKIHDLREQLMNSSLGSGTASLRSNPKRGFYIRA 432 (721)
T ss_pred CCEEEEECCEECCCCCHHHHHHHHHhcCCeEEEEEEeCchhhhhhhhhhhhhhhhcccccccCCccccccccccceeEEE
Confidence 7999999998887655455555554321 0125699999
Q ss_pred eeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCC---CceeeecChhHHHHHHHHhhhccCCCccccc
Q psy6613 53 NVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEG---SECGFIPSPVKLENLRLQQTQARNPKLYSSK 129 (510)
Q Consensus 53 lfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~---~~~GlIPS~~~~Errr~~~~~kk~~~l~~sk 129 (510)
+|||++..|+++|+ .+|+|++||||+|+++.|++||+|++++.+ +..|+|||+.++|++...+. +...+.++
T Consensus 433 l~dy~~~~d~~~p~--~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~~~~~~~---~~~~~~~~ 507 (721)
T 2xkx_A 433 LFDYDKTKDCGFLS--QALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVERREWSRL---KAKDWGSS 507 (721)
T ss_pred eeccCcCCCCCCcc--ccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHHHHhhhc---ccccccCc
Confidence 99999999999994 579999999999999999999999998654 36799999999998744321 11112222
Q ss_pred CCCCCCCCCC--CCC----CCCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------
Q psy6613 130 TSSTSNLGAL--SSD----APSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----------------- 183 (510)
Q Consensus 130 ~~s~~~~~~~--~~d----~Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----------------- 183 (510)
+......... ++. .|.++|+| +||+ |+||+++|++ +|+.|.++|+||||+|
T Consensus 508 ~~~~~~~~~~~~Ye~V~~~~~~~~r~vvl~GP~---K~tl~~~L~~~~~~~~~~~vs~TTR~~r~gE~~G~dY~Fv~s~~ 584 (721)
T 2xkx_A 508 SGSQGREDSVLSYETVTQMEVHYARPIIILGPT---KDRANDDLLSEFPDKFGSCVPHTTRPKREYEIDGRDYHFVSSRE 584 (721)
T ss_pred chhhcccccCCCceeeecccCCCCCEEEEECCC---HHHHHHHHHHhCccceeecccccccCCCCCccCCceeEEecCHH
Confidence 1110000000 111 14577877 8994 9999999999 8989999999999987
Q ss_pred -hhhhhc----------------ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhc
Q psy6613 184 -VLTEVQ----------------TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 184 -Fe~~I~----------------TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~R 245 (510)
|+++++ |++++|++++++|++||||+|++| ++.++. .++|++|||+|||+++|++ |+.|
T Consensus 585 ~f~~~i~~~~flE~~~~~g~~YGt~~~~v~~~~~~g~~~ildi~~~~--~~~l~~~~~~p~~ifi~pps~~~L~~-l~~R 661 (721)
T 2xkx_A 585 KMEKDIRAHKFIEAGQYNSHLYGTSVQSVREVAEQGKHCILDVSANA--VRRLQAAHLHPIAIFIRPRSLENVLE-INKR 661 (721)
T ss_pred HHHHHHhcCCceEEEEECCccceeeHHHHHHHHHCCCcEEEeCCHHH--HHHHHhcccCCEEEEEeCCcHHHHHH-Hhcc
Confidence 344432 999999999999999999999998 777776 7889999999999999999 8889
Q ss_pred CCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q psy6613 246 GKSQTRHLNVQMVAAEKLAQCPQEMFDVILDENQLEDACEHIAEYLEAYWRATHPPAAPPQP 307 (510)
Q Consensus 246 gt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvNDdLd~A~~eL~~ileai~~a~h~p~~~p~~ 307 (510)
+++ +++.+||+++.++|..+.++||+||+||||++||++|.++| ....++++|+|..
T Consensus 662 ~t~--~~~~~rl~~a~~~e~~~~~~fd~vi~Nd~l~~a~~~l~~~i---~~~~~~~~Wvp~~ 718 (721)
T 2xkx_A 662 ITE--EQARKAFDRATKLEQEFTECFSAIVEGDSFEEIYHKVKRVI---EDLSGPYIWVPAR 718 (721)
T ss_pred CCH--HHHHHHHHHHHHHHHhccccCcEEEECcCHHHHHHHHHHHH---HhccCCcEEeecc
Confidence 865 56788887777778888899999999999999999999554 4578999999985
No 9
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=100.00 E-value=3.2e-33 Score=264.86 Aligned_cols=139 Identities=16% Similarity=0.289 Sum_probs=128.2
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc----------------ccHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ----------------TEIERVY 196 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~----------------TslesI~ 196 (510)
+|||||||+||+++|++ +|+.|.++||||||+| |++++. |+++.|.
T Consensus 7 ~GPSG~GK~Tl~~~L~~~~~~~~~~svs~TTR~pR~gE~~G~dY~Fvs~~eF~~~i~~g~flE~~~~~g~~YGt~~~~v~ 86 (186)
T 1ex7_A 7 SGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVK 86 (186)
T ss_dssp ECCTTSSHHHHHHHHHHHCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEEHHHHH
T ss_pred ECCCCCCHHHHHHHHHHhCCCCeEEEEEEeccCCCCCCcCCceeEeecHHHHHHHHHcCCEEEEEEEcCceeeeecceee
Confidence 99999999999999999 9999999999999998 555442 9999999
Q ss_pred HHHHcCCeEEEEeccCCchhHhhhc--CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCCCCccE
Q psy6613 197 ELASTLQLVVLDCDTINHPSQLAKT--NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQEMFDV 273 (510)
Q Consensus 197 ~vi~sGKi~ILDID~qg~~lq~lks--~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~~~FD~ 273 (510)
+++++|++||||+|++| ++.++. .+.+++|||.|||+++|++||+.||+++.+.+.+|| .+..+|+..+.+.||+
T Consensus 87 ~~l~~g~~vil~id~~g--~~~~k~~~~~~~~~Ifi~pps~e~L~~RL~~Rg~e~~e~i~~Rl~~a~~e~~~~~~~~fD~ 164 (186)
T 1ex7_A 87 QVSKSGKTCILDIDMQG--VKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAETGAHDK 164 (186)
T ss_dssp HHHHHTSEEEEECCHHH--HHHHHTCGGGCCEEEEEECSCHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTTTCSSE
T ss_pred ehhhCCCEEEecCCHHH--HHHHHHhcccCceEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhhccccCCcE
Confidence 99999999999999999 777776 568999999999999999999999999999999999 7778898877789999
Q ss_pred EEeCCCHHHHHHHHHHHH
Q psy6613 274 ILDENQLEDACEHIAEYL 291 (510)
Q Consensus 274 VIvNDdLd~A~~eL~~il 291 (510)
||+||||+.|+++|.+||
T Consensus 165 vIvNddle~a~~~l~~iI 182 (186)
T 1ex7_A 165 VIVNDDLDKAYKELKDFI 182 (186)
T ss_dssp EEECSSHHHHHHHHHHHH
T ss_pred EEECcCHHHHHHHHHHHH
Confidence 999999999999999555
No 10
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=99.95 E-value=1.4e-27 Score=228.47 Aligned_cols=145 Identities=21% Similarity=0.287 Sum_probs=116.9
Q ss_pred CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc--------------
Q psy6613 144 PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ-------------- 189 (510)
Q Consensus 144 Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~-------------- 189 (510)
|..+++| +||||+|||||++.|+. +|+.|.++++||||+| |.+++.
T Consensus 16 ~~~g~~ivl~GPSGaGKsTL~~~L~~~~~~~~~~~vs~TTR~p~~gE~~G~~y~fvs~~~f~~~i~~~~fle~~~~~~n~ 95 (197)
T 3ney_A 16 FQGRKTLVLIGASGVGRSHIKNALLSQNPEKFVYPVPYTTRPPRKSEEDGKEYHFISTEEMTRNISANEFLEFGSYQGNM 95 (197)
T ss_dssp CCSCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCCCTTCCTTSSCEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCCCEEEEECcCCCCHHHHHHHHHhhCCccEEeeecccccCCcCCeeccccceeccHHHhhhhhhhhhhhhhhhhhcee
Confidence 4467776 99999999999999999 8888999999999988 333321
Q ss_pred --ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhc
Q psy6613 190 --TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQC 266 (510)
Q Consensus 190 --TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~ 266 (510)
|+.+.|++++++|++||||+|++| ++.++. .++|++|||.|||++ ++++..+.+.+|+ ++++..
T Consensus 96 YGt~~~~v~~~l~~G~~vildid~qg--~~~~~~~~~~~~~Ifi~Pps~~--------~~~e~~~~i~~r~---~~~~~~ 162 (197)
T 3ney_A 96 FGTKFETVHQIHKQNKIAILDIEPQT--LKIVRTAELSPFIVFIAPTDQG--------TQTEALQQLQKDS---EAIRSQ 162 (197)
T ss_dssp EEEEHHHHHHHHHTTCEEEEECCGGG--HHHHCSTTTCEEEEEEEECCBS--------SCCHHHHHHHHHH---HHHHHH
T ss_pred cccchhhHHHHHhcCCeEEEEECHHH--HHHHHhcCCCceEEEEeCCCcc--------ccchHHHHHHHHH---HHHHHh
Confidence 889999999999999999999999 888876 689999999999974 3443334444444 344444
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHHHHHHhcCCCCCC
Q psy6613 267 PQEMFDVILDENQLEDACEHIAEYLEAYWRATHPPAAP 304 (510)
Q Consensus 267 ~~~~FD~VIvNDdLd~A~~eL~~ileai~~a~h~p~~~ 304 (510)
+.+.|||||+|||||.|+++|.. .+..+++.|+|+
T Consensus 163 ~~~~fd~vivNd~l~~a~~~l~~---ii~~~~~~pqWv 197 (197)
T 3ney_A 163 YAHYFDLSLVNNGVDETLKKLQE---AFDQACSSPQWV 197 (197)
T ss_dssp HGGGCSEEEEESCHHHHHHHHHH---HHHHCCCCCC--
T ss_pred hccCCCEEEECCCHHHHHHHHHH---HHHHccCCCCCC
Confidence 56899999999999999999994 446789999996
No 11
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=99.91 E-value=6.9e-25 Score=203.13 Aligned_cols=142 Identities=16% Similarity=0.282 Sum_probs=96.3
Q ss_pred CeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc----------------cc
Q psy6613 148 MII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ----------------TE 191 (510)
Q Consensus 148 RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~----------------Ts 191 (510)
+++ +||+|+|||||.+.|+. .|..|+++++||||+| |..++. ++
T Consensus 2 ~ii~l~GpsGaGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~yg~~ 81 (186)
T 3a00_A 2 RPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGST 81 (186)
T ss_dssp CCEEEESSSSSSHHHHHHHHHHHCGGGEECCCEEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred CEEEEECCCCCCHHHHHHHHHhhCCccceEEeeccccCCCCCccCCeeeeecCHHHHHHHHhhcceeeEEEEeceeccCc
Confidence 444 99999999999999998 8878999999999987 222211 78
Q ss_pred HHHHHHHHHcCCeEEEEeccCCchhHhhhc--CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCC
Q psy6613 192 IERVYELASTLQLVVLDCDTINHPSQLAKT--NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQ 268 (510)
Q Consensus 192 lesI~~vi~sGKi~ILDID~qg~~lq~lks--~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~ 268 (510)
.+.|.++++.|++||||+|++| ++.++. .+.+++|||.||+.++|++||+.||+++++.+.+|| .+..+++..+.
T Consensus 82 ~~~i~~~l~~g~~~il~~~~~g--~~~l~~~~~~~~~~i~i~~p~~~~l~~Rl~~Rg~~~~~~i~~rl~~~~~~~~~~~~ 159 (186)
T 3a00_A 82 VASVKQVSKSGKTCILDIDMQG--VKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAET 159 (186)
T ss_dssp HHHHHHHHHTTCEEEEECCHHH--HHHHHTCGGGCCEEEEEECSCC---------------------------------C
T ss_pred HHHHHHHHHcCCeEEEEEcHHH--HHHHHHhcCCCeEEEEEECcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 8999999999999999999999 777766 678999999999999999999999999889999999 66677776667
Q ss_pred CCccEEEeCCCHHHHHHHHHHHH
Q psy6613 269 EMFDVILDENQLEDACEHIAEYL 291 (510)
Q Consensus 269 ~~FD~VIvNDdLd~A~~eL~~il 291 (510)
+.||+||+||+++.|+.+|.++|
T Consensus 160 ~~~d~vi~nd~~~~a~~~l~~~i 182 (186)
T 3a00_A 160 GAHDKVIVNDDLDKAYKELKDFI 182 (186)
T ss_dssp CCCSEEEECSSHHHHHHHHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHH
Confidence 89999999999999999999655
No 12
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=99.89 E-value=2.9e-23 Score=196.01 Aligned_cols=144 Identities=13% Similarity=0.174 Sum_probs=117.0
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc----------------
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ---------------- 189 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~---------------- 189 (510)
.+++| +||+|+|||||.+.|.. +|..|..+++||||+| |..++.
T Consensus 7 ~g~~i~l~GpsGsGKsTl~~~L~~~~~~~~~~~~~~~tr~~~~~e~~g~~y~~~~~~~f~~~~~~~~~le~~~~~~~~yg 86 (208)
T 3tau_A 7 RGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYG 86 (208)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHSTTCCCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCcEEEEECcCCCCHHHHHHHHHhhCCCcEEEEEecccccCcCcccCCceeEEecHHHHHHHHhcCcEEEEEEEccccCC
Confidence 35555 99999999999999998 7767999999999987 222211
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcC
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCP 267 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~ 267 (510)
|+.+.|.++++.|++||||+|++| ...++. ...+++|||.|||.++|++|+..||+++.+.+.+|| .+..+++..
T Consensus 87 ~~~~~i~~~l~~g~~vild~~~~g--~~~~~~~~~~~~~i~i~~ps~~~l~~Rl~~R~~~~~e~i~~Rl~~~~~e~~~~- 163 (208)
T 3tau_A 87 TPLEYVEEKLAAGVDIFLEIEVQG--AMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM- 163 (208)
T ss_dssp EEHHHHHHHHHTTCCEEEECCHHH--HHHHHHHCTTSEEEEEECTTTTTSSCC-------CCHHHHHHHHHHHHHHHHG-
T ss_pred CcHHHHHHHHHcCCeEEEEeeHHH--HHHHHHhCCCeEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh-
Confidence 788999999999999999999999 666665 778999999999999999999999998889999999 555566554
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 268 QEMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 268 ~~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
+.||+||+||++++++.+|..+|.+
T Consensus 164 -~~~d~vivN~~~~~~~~~l~~~i~~ 188 (208)
T 3tau_A 164 -ASYDYAVVNDVVANAVQKIKGIVET 188 (208)
T ss_dssp -GGSSEEEECSSHHHHHHHHHHHHHH
T ss_pred -ccCCEEEECcCHHHHHHHHHHHHHH
Confidence 7899999999999999999977754
No 13
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=99.88 E-value=3.3e-23 Score=191.20 Aligned_cols=139 Identities=14% Similarity=0.283 Sum_probs=115.1
Q ss_pred CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc--------------
Q psy6613 144 PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ-------------- 189 (510)
Q Consensus 144 Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~-------------- 189 (510)
|..++++ +||||+|||||.+.|+. +|..|..+|+||||+| |...+.
T Consensus 2 ~~~g~~i~i~GpsGsGKSTL~~~L~~~~~~~~~~~i~~ttr~~~~ge~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~n~ 81 (180)
T 1kgd_A 2 SHMRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRPPKKDEENGKNYYFVSHDQMMQDISNNEYLEYGSHEDAM 81 (180)
T ss_dssp -CCCCEEEEECCTTSSHHHHHHHHHHHCTTTEECCCCEECSCC---CCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHhhCCccEEEeeeccCCCCCccccCCCeeEEeCHHHHHHHHHcCCceEEEEEcCcc
Confidence 4556766 99999999999999998 7767889999999986 222211
Q ss_pred --ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHh
Q psy6613 190 --TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQ 265 (510)
Q Consensus 190 --TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq 265 (510)
++.+.|.++++.|++||||+|++| +..++. .+.+++|||.||++++|++| ++.+ +|| .+..+++.
T Consensus 82 yg~~~~~i~~~l~~g~~vil~id~~g--~~~~~~~~~~~~~ifi~~p~~~~l~~R--------~~~i-~r~~~~~~~~~~ 150 (180)
T 1kgd_A 82 YGTKLETIRKIHEQGLIAILDVEPQA--LKVLRTAEFAPFVVFIAAPTITPGLNE--------DESL-QRLQKESDILQR 150 (180)
T ss_dssp EEEEHHHHHHHHHTTCEEEEECCGGG--HHHHSSTTTCEEEEEEECCSCCTTSCC--------SHHH-HHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHCCCeEEEEECHHH--HHHHHHhCCCcEEEEEECCCHHHHHhh--------HHHH-HHHHHHHHHHHH
Confidence 677889999999999999999999 777776 56789999999999998876 3455 788 76678865
Q ss_pred cCCCCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 266 CPQEMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 266 ~~~~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
.+.+.||++|+||+++.|+++|.++|..
T Consensus 151 ~~~~~~d~~i~n~~~~~~~~~l~~~i~~ 178 (180)
T 1kgd_A 151 TYAHYFDLTIINNEIDETIRHLEEAVEL 178 (180)
T ss_dssp HHGGGCSEEEECSSHHHHHHHHHHHHHH
T ss_pred hhhCCCcEEEECcCHHHHHHHHHHHHHH
Confidence 5668999999999999999999987764
No 14
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=99.85 E-value=5.1e-21 Score=184.41 Aligned_cols=143 Identities=17% Similarity=0.224 Sum_probs=120.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCC-CceeeecCCCchh-----------------hhhhh---------------c-
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPS-KRAIMERSNSRSS-----------------VLTEV---------------Q- 189 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~-~F~~sVshTTR~p-----------------Fe~~I---------------~- 189 (510)
|+++ +||||+|||||.+.|+. .|. .+..+|++|||++ |...+ +
T Consensus 16 G~ii~l~GpsGsGKSTLlk~L~g~~~p~~~~g~v~~ttr~~~~~e~~gi~y~fq~~~~f~~~~~~~~f~E~~~~~~~~yg 95 (219)
T 1s96_A 16 GTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYG 95 (219)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSCTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CcEEEEECCCCCCHHHHHHHHhccCCCCceEEEEEecCCCCCcccccCceEEECCHHHHHHHHhcCHHHHHHHHHhccCC
Confidence 4554 99999999999999998 663 6888999999976 22111 0
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcC
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCP 267 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~ 267 (510)
|+.+.|.++++.|++||||+|+++ .+.++. ....++|||.||++++|++|+..||+++.+++.+|+ .+..+++.
T Consensus 96 ~~~~~v~~~l~~G~illLDLD~~~--~~~i~~~l~~~~tI~i~th~~~~l~~Rl~~rG~~~~e~i~~rl~~a~~e~~~-- 171 (219)
T 1s96_A 96 TSREAIEQVLATGVDVFLDIDWQG--AQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSH-- 171 (219)
T ss_dssp EEHHHHHHHHTTTCEEEEECCHHH--HHHHHHHCTTCEEEEEECSSHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHTT--
T ss_pred CCHHHHHHHHhcCCeEEEEECHHH--HHHHHHHccCCEEEEEECCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhh--
Confidence 778899999999999999999999 666665 346899999999999999999999999999999999 66667654
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 268 QEMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 268 ~~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
.+.||++|+|||+++|+.+|..+|.+
T Consensus 172 ~~~~d~~i~Nd~l~~a~~~l~~ii~~ 197 (219)
T 1s96_A 172 YAEYDYLIVNDDFDTALTDLKTIIRA 197 (219)
T ss_dssp GGGSSEEEECSSHHHHHHHHHHHHHH
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHHH
Confidence 47899999999999999999977754
No 15
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=99.84 E-value=1.5e-20 Score=176.16 Aligned_cols=146 Identities=12% Similarity=0.148 Sum_probs=119.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhhc----------------c
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEVQ----------------T 190 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I~----------------T 190 (510)
+++| +||||+||||+.+.|.+ .|..|.++++||||++ |..++. +
T Consensus 12 ~~~i~l~G~sGsGKsTl~~~L~~~~~~~~~~~~~~ttR~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (204)
T 2qor_A 12 IPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGT 91 (204)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHHHCTTTEEECCEEECSCCCTTCCBTTTEEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhCccceeeeeeecCCCCCCCCCCCcceeeCCHHHHHHHHHcCCCEEeHHhCCCeecC
Confidence 4444 99999999999999998 7655999999999987 222110 6
Q ss_pred cHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CC--CceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhc
Q psy6613 191 EIERVYELASTLQLVVLDCDTINHPSQLAKT-NL--SPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQC 266 (510)
Q Consensus 191 slesI~~vi~sGKi~ILDID~qg~~lq~lks-~l--~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~ 266 (510)
+.+.|.+++++|+.||+|++++| ...++. .. .+++|||.|+|.++|.+|++.|+.++.+.+.+|| .+..++...
T Consensus 92 ~~~~i~~~l~~g~~vi~d~~~~~--~~~l~~~~~~~~~~~i~l~~~s~e~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~~ 169 (204)
T 2qor_A 92 LKSEYDLAVGEGKICLFEMNING--VKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTREMDEA 169 (204)
T ss_dssp EHHHHHHHHHTTCEEEEECCHHH--HHHHHHCSSCSCCEEEEEECSCHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCeEEEEECHHH--HHHHHHhcCCCCeEEEEEcCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 77899999999999999999988 666665 33 5799999999999999999999988888888889 554566521
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHHHH
Q psy6613 267 PQEMFDVILDENQLEDACEHIAEYLEAY 294 (510)
Q Consensus 267 ~~~~FD~VIvNDdLd~A~~eL~~ileai 294 (510)
+...||++|+|+++++++++|.++|...
T Consensus 170 ~~~~~d~vi~n~~~e~~~~~i~~~i~~~ 197 (204)
T 2qor_A 170 DKVGFNYFIVNDDLARTYAELREYLLGS 197 (204)
T ss_dssp HHHTCSEEEECSSHHHHHHHHHHHHHHH
T ss_pred hhccCcEEEECcCHHHHHHHHHHHHHHH
Confidence 3468999999999999999999777653
No 16
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=99.82 E-value=7.4e-20 Score=171.94 Aligned_cols=142 Identities=18% Similarity=0.275 Sum_probs=122.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhh---------------c-ccHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEV---------------Q-TEIERVY 196 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I---------------~-TslesI~ 196 (510)
+||+|+|||||.+.|+. +|..|+++++||||+| |...+ + ++.+.|.
T Consensus 10 vGpsGaGKSTLl~~L~~~~~~~~~~~v~~ttr~~~~g~~~g~~~~~~~~~~~~~~i~~~~~l~~~~~~~n~~g~~~~~i~ 89 (198)
T 1lvg_A 10 SGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVR 89 (198)
T ss_dssp ECCTTSSHHHHHHHHHHHHTTTEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEEEHHHHH
T ss_pred ECCCCCCHHHHHHHHHhhCchhceeeeeeeccCCCCcccCCceEEEccHHHHHHHHHcCCCEeeeeecCccCCCCHHHHH
Confidence 99999999999999998 7888999999999987 21211 0 6788999
Q ss_pred HHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhc-CCCCccE
Q psy6613 197 ELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQC-PQEMFDV 273 (510)
Q Consensus 197 ~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~-~~~~FD~ 273 (510)
++++.|+.|++|++++| ...++. .+.|.+|||.||++..|.+++..+++++++.+.++| .+..++... +.+.||+
T Consensus 90 ~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~l~~p~~~ilde~~~~~d~~~e~~i~~~l~~~~~~~~~a~~~~~~D~ 167 (198)
T 1lvg_A 90 AVQAMNRICVLDVDLQG--VRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDL 167 (198)
T ss_dssp HHHHTTCEEEEECCHHH--HHHHTTSSCCCEEEEEECSCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHTTGGGSTTTCSE
T ss_pred HHHHcCCcEEEECCHHH--HHHHHhcCCCcEEEEEeCCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhccCCceE
Confidence 99999999999999988 666555 678999999999999999999999999999999999 666666543 4478999
Q ss_pred EEeCCCHHHHHHHHHHHHHHH
Q psy6613 274 ILDENQLEDACEHIAEYLEAY 294 (510)
Q Consensus 274 VIvNDdLd~A~~eL~~ileai 294 (510)
||+|++++.|+++|.++|.+.
T Consensus 168 iivnd~le~a~~~l~~ii~~~ 188 (198)
T 1lvg_A 168 VIINDDLDKAYATLKQALSEE 188 (198)
T ss_dssp EEECSSHHHHHHHHHHHTHHH
T ss_pred EEECCCHHHHHHHHHHHHHHH
Confidence 999999999999999888654
No 17
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=99.75 E-value=9.1e-18 Score=154.95 Aligned_cols=142 Identities=16% Similarity=0.199 Sum_probs=115.9
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhh-----------c-----c
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEV-----------Q-----T 190 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I-----------~-----T 190 (510)
|.++ +||+|+|||||.+.|.. .| .+.+...++||.+ |.... + +
T Consensus 7 g~ii~l~Gp~GsGKSTl~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (205)
T 3tr0_A 7 ANLFIISAPSGAGKTSLVRALVKALA-EIKISISHTTRPKRPGDQEGVDYFFIDETRFQAMVKEGAFLEHATIYERHYGT 85 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSS-SEEECCCEECSCCCTTCCBTTTBEECCHHHHHHHHHHTCEEEEEEETTEEEEE
T ss_pred CcEEEEECcCCCCHHHHHHHHHhhCC-CeEEeceeccCCCchhHhcCceEEeccHHHHHHHHhcCcEEeeeeeecccccc
Confidence 4555 99999999999999988 77 6777788888765 11111 0 5
Q ss_pred cHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCC
Q psy6613 191 EIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQ 268 (510)
Q Consensus 191 slesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~ 268 (510)
..+.|.++++.|++||+|+++++ +..++. ...+.+||+.||+.++|.+|+..|+.++.+.+.+|| .+..+++. .
T Consensus 86 ~~~~i~~~l~~g~~vi~d~~~~~--~~~~~~~~~~~~~v~~~~~~~e~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~--~ 161 (205)
T 3tr0_A 86 EKDWVLRQLKAGRDVLLEIDWQG--ARQIRELFPPALSIFILPPSIEALRERLIKRRQDDTAIIEQRLALAREEMAH--Y 161 (205)
T ss_dssp EHHHHHHHHHTTCEEEEECCHHH--HHHHHHHCTTCEEEEEECSCHHHHHHHHHTCTTSCSSTHHHHHHHHHHHHTT--G
T ss_pred hHHHHHHHHHcCCeEEEEECHHH--HHHHHHhCCCcEEEEEECcCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc--c
Confidence 66789999999999999999988 666655 678899999999999999999999988888888999 55444443 3
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 269 EMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 269 ~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
+.||+||+|+++++++++|..+|.+
T Consensus 162 ~~~d~vi~n~~~~~~~~~l~~~i~~ 186 (205)
T 3tr0_A 162 KEFDYLVVNDNFDQAVQNLIHIISA 186 (205)
T ss_dssp GGCSEEEECSSHHHHHHHHHHHHHH
T ss_pred cCCCEEEECCCHHHHHHHHHHHHHH
Confidence 7899999999999999999977654
No 18
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=99.69 E-value=2.4e-17 Score=156.89 Aligned_cols=142 Identities=13% Similarity=0.163 Sum_probs=97.5
Q ss_pred CCeE--EecCcCChHHHHHHHh-c-CCCCceeeecCCCchh-----------------hhhhh-----------c-----
Q psy6613 147 GMII--ITRVTADISLAKRSLM-S-NPSKRAIMERSNSRSS-----------------VLTEV-----------Q----- 189 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL-~-~P~~F~~sVshTTR~p-----------------Fe~~I-----------~----- 189 (510)
|.++ +||+|+|||||.+.|. . .| .+...+++|||++ |...+ .
T Consensus 27 G~ii~l~Gp~GsGKSTl~~~L~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (231)
T 3lnc_A 27 GVILVLSSPSGCGKTTVANKLLEKQKN-NIVKSVSVTTRAARKGEKEGKDYYFVDREEFLRLCSNGEIIEHAEVFGNFYG 105 (231)
T ss_dssp CCEEEEECSCC----CHHHHHHC-----CEEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhcCCC-CcccccccCCCCCCccccCCCeEEEecHHHhhhhhhcCceehhhhhccccCC
Confidence 4555 9999999999999999 7 65 4788899999887 11110 0
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhcCC--CceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhc
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKTNL--SPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQC 266 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks~l--~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~ 266 (510)
++.+.|.++++.|+.||+|+++++ ...++..+ .+++|||.||+.++|.+|+..|+..+.+.+.++| .+..+++.
T Consensus 106 ~~~~~i~~~~~~~~~vild~~~~g--~~~~~~~~~~~~~~v~v~~~~~~~l~~Rl~~R~~~~~~~i~~rl~~~~~~~~~- 182 (231)
T 3lnc_A 106 VPRKNLEDNVDKGVSTLLVIDWQG--AFKFMEMMREHVVSIFIMPPSMEELRRRLCGRRADDSEVVEARLKGAAFEISH- 182 (231)
T ss_dssp EECTTHHHHHHHTCEEEEECCHHH--HHHHHHHSGGGEEEEEEECSCHHHHHHC--------------CHHHHHHHHTT-
T ss_pred CCHHHHHHHHHcCCeEEEEcCHHH--HHHHHHhcCCCeEEEEEECCcHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhh-
Confidence 456778999999999999999988 66666644 5789999999999999999999888888888888 55555554
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 267 PQEMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 267 ~~~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
...||+||+|+++++++++|..+|..
T Consensus 183 -~~~~d~vI~n~~~e~~~~~l~~~i~~ 208 (231)
T 3lnc_A 183 -CEAYDYVIVNEDIEETADRISNILRA 208 (231)
T ss_dssp -GGGSSEEEECSSHHHHHHHHHHHHHH
T ss_pred -hcCCeEEEECcCHHHHHHHHHHHHHH
Confidence 37899999999999999999977754
No 19
>2d46_A Calcium channel, voltage-dependent, beta 4 subunit isoform A; Ca2+ channel, BETA4A subunit, nuclear magnetic resonance, alternative spliving; NMR {Homo sapiens}
Probab=99.67 E-value=1.4e-17 Score=129.13 Aligned_cols=43 Identities=51% Similarity=0.744 Sum_probs=41.8
Q ss_pred CCCCcccCCCCCC-CCCChhHhHHHHHHHHHHHHHHHHHHhccC
Q psy6613 329 SMGSAESNFSQPS-SDLSLDEEKETLRREKERQALSQLEKARVT 371 (510)
Q Consensus 329 ~~~s~~s~~s~ps-~~~s~~~~~~~~~~~~e~~a~~~l~~a~~~ 371 (510)
.+||||||++||| ||+|||||||++|||+||||++||||||+|
T Consensus 17 ~~gSadS~~srpSdSD~SldEdrE~~RrE~ErqA~~QLekAk~K 60 (61)
T 2d46_A 17 EAGSADSYTSRPSDSDVSLEEDREAIRQEREQQAAIQLERAKSK 60 (61)
T ss_dssp CCCSSEECCSSSCCCEECGGGCCTTTHHHHHHHHHHHHHHHTCC
T ss_pred ccccccccCCCCCccccchhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 4899999999999 999999999999999999999999999997
No 20
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=99.61 E-value=1.3e-14 Score=138.30 Aligned_cols=145 Identities=11% Similarity=0.121 Sum_probs=116.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhhh---------------c-c
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTEV---------------Q-T 190 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~I---------------~-T 190 (510)
|.++ +||+|+|||||.+.|.. .|..+.+.+++|||++ |...+ + +
T Consensus 23 G~~~~lvGpsGsGKSTLl~~L~g~~pG~i~~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~ 102 (218)
T 1z6g_A 23 IYPLVICGPSGVGKGTLIKKLLNEFPNYFYFSVSCTTRKKREKEKEGVDYYFIDKTIFEDKLKNEDFLEYDNYANNFYGT 102 (218)
T ss_dssp CCCEEEECSTTSSHHHHHHHHHHHSTTTEEECCCEECSCCCSSCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHhhCCCcEEEeecccCCCCCcccccCCeEEECCHHHHHHhhhccchhhhhhcccccCCC
Confidence 4444 99999999999999988 7756666788888753 22211 0 5
Q ss_pred cHHHHHHHHHcCCeEEEEeccCCchhHhhhcCC---CceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhc
Q psy6613 191 EIERVYELASTLQLVVLDCDTINHPSQLAKTNL---SPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQC 266 (510)
Q Consensus 191 slesI~~vi~sGKi~ILDID~qg~~lq~lks~l---~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~ 266 (510)
+...+.++++.++.|++|+++.| .+..+..+ .|..|||.+|++..|.+++..++.++.+.+.++| .+..++...
T Consensus 103 ~~~~i~~~l~~~~~~il~~~lsg--gq~qR~~i~~~~~~~~ll~~~~~~~Lde~~~~~d~~~~~~i~~~l~~~~~~~~~~ 180 (218)
T 1z6g_A 103 LKSEYDKAKEQNKICLFEMNING--VKQLKKSTHIKNALYIFIKPPSTDVLLSRLLTRNTENQEQIQKRMEQLNIELHEA 180 (218)
T ss_dssp EHHHHHHHHHTTCEEEEEECHHH--HHHHTTCSSCCSCEEEEEECSCHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCcEEEEecHHH--HHHHHHHhcCCCcEEEEEeCcCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh
Confidence 56789999999999999999998 77777644 6799999999999999999999999999999998 555554422
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHHH
Q psy6613 267 PQEMFDVILDENQLEDACEHIAEYLEA 293 (510)
Q Consensus 267 ~~~~FD~VIvNDdLd~A~~eL~~ilea 293 (510)
....||+||+|+|+++|+..+..+|..
T Consensus 181 h~~~~d~iiv~~~~~ea~~~~~~ii~~ 207 (218)
T 1z6g_A 181 NLLNFNLSIINDDLTLTYQQLKNYLLN 207 (218)
T ss_dssp TTSCCSEEEECSSHHHHHHHHHHHHHH
T ss_pred cccCCCEEEECCCHHHHHHHHHHHHHH
Confidence 246899999999999999999977654
No 21
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=99.51 E-value=6e-14 Score=129.24 Aligned_cols=143 Identities=13% Similarity=0.191 Sum_probs=88.4
Q ss_pred CCeE--EecCcCChHHHHHHHhc-C-CCCceeeecCCCchh-----------------hhhhh-----------c-----
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-N-PSKRAIMERSNSRSS-----------------VLTEV-----------Q----- 189 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~-P~~F~~sVshTTR~p-----------------Fe~~I-----------~----- 189 (510)
+.+| +||+|+||||+.+.|.. . | .+.+.+.+++|.+ |...+ .
T Consensus 6 g~~i~l~G~~GsGKSTl~~~L~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 84 (207)
T 2j41_A 6 GLLIVLSGPSGVGKGTVRKRIFEDPST-SYKYSISMTTRQMREGEVDGVDYFFKTRDAFEALIKDDQFIEYAEYVGNYYG 84 (207)
T ss_dssp CCEEEEECSTTSCHHHHHHHHHHCTTC-CEECCCCEECSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEETTEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHhhCC-CeEEecccccCCCCCCccCCCceEEcCHHHHHHHHHcCCeEEEEeECCeecC
Confidence 3444 99999999999999988 5 5 4565677777754 11110 0
Q ss_pred ccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcC
Q psy6613 190 TEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCP 267 (510)
Q Consensus 190 TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~ 267 (510)
+..+.+..+++.|+.||+|++..+ ...++. ..++++||+.||+.+++.+|+..|+..+.+.+.+++ ....+++.
T Consensus 85 ~~~~~i~~~l~~g~~vv~d~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~Rl~~R~~~~~~~~~~rl~~~~~~~~~-- 160 (207)
T 2j41_A 85 TPVQYVKDTMDEGHDVFLEIEVEG--AKQVRKKFPDALFIFLAPPSLEHLRERLVGRGTESDEKIQSRINEARKEVEM-- 160 (207)
T ss_dssp EEHHHHHHHHHTTCEEEEECCGGG--HHHHHHHCTTSEEEEEECCC---------------------------CGGGG--
T ss_pred CCHHHHHHHHHcCCeEEEEECHHH--HHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhc--
Confidence 346788889999999999999887 555555 447899999999999999999999876666677777 33333333
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHHHH
Q psy6613 268 QEMFDVILDENQLEDACEHIAEYLEAY 294 (510)
Q Consensus 268 ~~~FD~VIvNDdLd~A~~eL~~ileai 294 (510)
...+|++|+|++++++++++.+++...
T Consensus 161 ~~~~d~vI~n~~~e~~~~~i~~~l~~~ 187 (207)
T 2j41_A 161 MNLYDYVVVNDEVELAKNRIQCIVEAE 187 (207)
T ss_dssp GGGCSEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHHHh
Confidence 257899999999999999999777654
No 22
>2d46_A Calcium channel, voltage-dependent, beta 4 subunit isoform A; Ca2+ channel, BETA4A subunit, nuclear magnetic resonance, alternative spliving; NMR {Homo sapiens}
Probab=99.39 E-value=9.6e-14 Score=107.80 Aligned_cols=44 Identities=52% Similarity=0.750 Sum_probs=42.3
Q ss_pred cccCCCCCCCcCC-CCccchhhhHHHhHHHHHHHHHHHhhhccCC
Q psy6613 2 VVGSAESNFSQPS-SDLSLDEEKETLRREKERQALSQLEKARAKN 45 (510)
Q Consensus 2 ~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~~~~a~~~L~~a~~k~ 45 (510)
.+||||||+|||| +|+|||+|+|++|+|+|+||+.||++|+.||
T Consensus 17 ~~gSadS~~srpSdSD~SldEdrE~~RrE~ErqA~~QLekAk~KP 61 (61)
T 2d46_A 17 EAGSADSYTSRPSDSDVSLEEDREAIRQEREQQAAIQLERAKSKP 61 (61)
T ss_dssp CCCSSEECCSSSCCCEECGGGCCTTTHHHHHHHHHHHHHHHTCCC
T ss_pred ccccccccCCCCCccccchhhhhHHHHHHHHHHHHHHHHHhhcCC
Confidence 3699999999999 9999999999999999999999999999987
No 23
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.31 E-value=2.7e-12 Score=103.89 Aligned_cols=62 Identities=13% Similarity=0.233 Sum_probs=55.4
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEe-ecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKE-KYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~-~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....++||+|||++..++..||.+.+|+|++||+|+|++ +.+++||+|+. +++.|+||++..
T Consensus 5 ~~~~~~~Alydy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~fP~~yv 67 (75)
T 2ege_A 5 SSGKIMIAALDYDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGEL---GGHRGLVPAHLL 67 (75)
T ss_dssp CCSEEEEESSCBCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEES---SSCEEEEETTTE
T ss_pred CCCcEEEECCCCCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEE---CCcEEEEChHHe
Confidence 345679999999999998999999999999999999997 58899999997 578999999865
No 24
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=7.5e-12 Score=101.37 Aligned_cols=62 Identities=15% Similarity=0.224 Sum_probs=55.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC-CceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS-NWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~-~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||++..++..||.+.+|+|++||+|+|+++.|+ +||.|+. +++.|+||+...+
T Consensus 6 ~~~~~~Al~dy~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~~P~~yv~ 68 (76)
T 2csi_A 6 SGRRMVALYDYDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGEL---NGQKGLVPSNFLE 68 (76)
T ss_dssp CSEEEECSSCCCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEE---TTEEEEEEGGGCC
T ss_pred CccEEEEcccCCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEE---CCcEEEEehHHEE
Confidence 355799999999999999999999999999999999999775 7999997 5799999998754
No 25
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=99.24 E-value=5.3e-12 Score=99.28 Aligned_cols=52 Identities=23% Similarity=0.514 Sum_probs=45.5
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChh
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPV 108 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~ 108 (510)
.+||+|||.++.+++ .|+|++||+|.|+++.|++||.|++ .+|+.|+||++.
T Consensus 5 ~~rAlydy~~~~~~e------~Ls~~~Gd~i~v~~~~~~~Ww~g~~--~~G~~G~fP~ny 56 (60)
T 2lx7_A 5 RCRTLYPFSGERHGQ------GLRFAAGELITLLQVPDGGWWEGEK--EDGLRGWFPASY 56 (60)
T ss_dssp EEEESCCCCSCCCSS------CCCCCTTCEEEBSCCCTTSCEEEEC--TTSCEEEECGGG
T ss_pred EEEECcccCCCCCCC------CccCCCCCEEEEeEecCCCeEEEEe--CCCCEEEEcHHH
Confidence 689999999987642 4999999999999999999999986 347899999975
No 26
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=99.22 E-value=1.4e-11 Score=98.15 Aligned_cols=56 Identities=20% Similarity=0.380 Sum_probs=48.9
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+.+||+|||.+..++ +|+|++||+|.|+++.|++||.|++.. +|+.|+||++..
T Consensus 5 ~~~~~~Alydy~a~~~~-------ELs~~~Gd~i~v~~~~~~gWw~g~~~~-~g~~G~~P~nyV 60 (65)
T 2lj0_A 5 DLFSYQALYSYIPQNDD-------ELELRDGDIVDVMEKCDDGWFVGTSRR-TKQFGTFPGNYV 60 (65)
T ss_dssp SSCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEETTSE
T ss_pred cCEEEEEceeECCCCcC-------CcCCCCCCEEEEeEeCCCCEEEEEECC-CCCEEEEehhHe
Confidence 45678999999999875 599999999999999999999999854 478999999754
No 27
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=99.20 E-value=2e-11 Score=96.54 Aligned_cols=58 Identities=19% Similarity=0.458 Sum_probs=49.4
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCC--ceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGS--ECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~--~~GlIPS~~~ 109 (510)
+..+++||+|||.+..++ +|+|++||+|+|+++.+++||.|++.++++ +.|+||++..
T Consensus 5 ~~~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv 64 (68)
T 1tg0_A 5 EVPFKVVAQFPYKSDYED-------DLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFV 64 (68)
T ss_dssp CSSEEEEESSCBCCSCTT-------BCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGE
T ss_pred CCCEEEEECeeECcCCcC-------CCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHE
Confidence 356789999999998765 599999999999999999999999865432 7999998754
No 28
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=99.19 E-value=1.9e-11 Score=98.84 Aligned_cols=60 Identities=23% Similarity=0.420 Sum_probs=51.2
Q ss_pred cCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 43 AKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 43 ~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++.+..++.|+||+...
T Consensus 6 ~~~~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv 65 (76)
T 2ed1_A 6 SGNKVRRVKTIYDCQADNDD-------ELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFV 65 (76)
T ss_dssp SSCCCEEEEESSCCCCSSSS-------BCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGE
T ss_pred CCCCCeEEEECccCCCCCcC-------CcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHe
Confidence 34556789999999998765 5999999999999999999999998654468999999765
No 29
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=99.16 E-value=2.2e-11 Score=121.18 Aligned_cols=146 Identities=10% Similarity=0.001 Sum_probs=99.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecC-CCchh---hhhh----------hc-----c-cHHHHHHHHHcCCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERS-NSRSS---VLTE----------VQ-----T-EIERVYELASTLQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVsh-TTR~p---Fe~~----------I~-----T-slesI~~vi~sGKi~ILDI 209 (510)
+||+|+||||+.++|.+ .+. ...+|++ ++|.+ |... +. + ....|.+.++.|+.||||+
T Consensus 39 ~G~sGsGKSTla~~L~~~~~~-~~~~Is~D~~R~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~v~~~l~~g~~vIld~ 117 (287)
T 1gvn_B 39 GGQPGSGKTSLRSAIFEETQG-NVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEG 117 (287)
T ss_dssp ECCTTSCTHHHHHHHHHHTTT-CCEEECTHHHHTTSTTHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred ECCCCCCHHHHHHHHHHHhCC-CeEEEechHhHHhchhhHHHHHHccchhhhhhhHHHHHHHHHHHHHHHhcCCeEEEEC
Confidence 99999999999999998 653 4456666 77654 3211 11 3 4466788889999999999
Q ss_pred ccCCchh---Hhh---hc-CCC-ceEEEEeCCCHHHH--HHHHH---------hcCCC--cHHHHHHHH-HHHHHHHhcC
Q psy6613 210 DTINHPS---QLA---KT-NLS-PCIVYLKISSPKVL--QRLIK---------SRGKS--QTRHLNVQM-VAAEKLAQCP 267 (510)
Q Consensus 210 D~qg~~l---q~l---ks-~l~-PivIFIkPPS~e~L--~~rLr---------~Rgt~--~~e~i~kRL-~aa~eLEq~~ 267 (510)
+.++ +. +.+ +. .+. .+++|+.||+...| .+|+. .|+++ ..+.+.+|| .+..+|+..
T Consensus 118 ~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~p~~~~~l~~~~Rl~~R~~~g~l~~R~~~~e~~~~i~~rl~~a~~el~~~- 195 (287)
T 1gvn_B 118 TGRT-TDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKT- 195 (287)
T ss_dssp CCCC-SHHHHHHHHHHHTTTCEEEEEEECCCHHHHHHHHHHHHHHHHHHCTTTCCCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCCC-HHHHHHHHHHHHhCCCcEEEEEEECCHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHcC-
Confidence 9988 22 222 22 222 25677788887765 67753 35553 346677888 777888766
Q ss_pred CCCccEEEeCCCH--------HHHHHHHHHHHHHHHHhcCCCCCC
Q psy6613 268 QEMFDVILDENQL--------EDACEHIAEYLEAYWRATHPPAAP 304 (510)
Q Consensus 268 ~~~FD~VIvNDdL--------d~A~~eL~~ileai~~a~h~p~~~ 304 (510)
+.||+|++||+. +.+..++. +++.+++...|.
T Consensus 196 -~~~d~v~v~d~~g~~ly~~~~~~~~~~~----~ii~~e~~r~~~ 235 (287)
T 1gvn_B 196 -GLFSDIRLYNREGVKLYSSLETPSISPK----ETLEKELNRKVS 235 (287)
T ss_dssp -TCCSCEEEECTTCCEEEETTTCTTSCHH----HHHHHHHSCCCC
T ss_pred -CCCCeEEEEeCCCCEeeccCCCCCcCHH----HHHHHHHcCCCC
Confidence 789999999985 67777776 455555555554
No 30
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=99.14 E-value=5.5e-11 Score=91.41 Aligned_cols=54 Identities=22% Similarity=0.566 Sum_probs=47.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ +++.|+||+...
T Consensus 3 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 56 (59)
T 2g6f_X 3 LGSVVRAKFNFQQTNED-------ELSFSKGDVIHVTRVEEGGWWEGTH---NGRTGWFPSNYV 56 (59)
T ss_dssp CCCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGE
T ss_pred CCcEEEECceeCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHE
Confidence 44579999999998764 6999999999999999999999997 578999998754
No 31
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=99.13 E-value=5.3e-11 Score=93.94 Aligned_cols=53 Identities=25% Similarity=0.552 Sum_probs=46.8
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++||+|||.+..++ +|+|++||+|.|+++.+++||.|+.. +++.|+||++..
T Consensus 4 ~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv 56 (65)
T 1b07_A 4 EYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYV 56 (65)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEECT--TSCEEEEEGGGE
T ss_pred eEEEECCcCCCCCCC-------ccCCcCCCEEEEEEecCCCeEEEEEC--CCCEEEEChHHE
Confidence 478999999998775 59999999999999999999999964 478999999764
No 32
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=99.12 E-value=6.9e-11 Score=93.58 Aligned_cols=54 Identities=17% Similarity=0.348 Sum_probs=47.4
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec---CCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY---DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~---d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++||+|||.+..++ +|+|++||+|+|+++. +++||.|+. +|+.|+||+...
T Consensus 2 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv 58 (69)
T 1wyx_A 2 LNVLAKALYDNVAESPD-------ELSFRKGDIMTVLEQDTQGLDGWWLCSL---HGRQGIVPGNRL 58 (69)
T ss_dssp CEEEEEESSCBCCSSTT-------BCCBCTTCEEEEEETTGGGCTTEEEEEE---TTEEEEEEGGGE
T ss_pred CCEEEEECccCCcCCCC-------ccCCcCCCEEEEeECCCCCCCCcEEEEE---CCcEEEechhhE
Confidence 45789999999998765 6999999999999997 799999996 578999998764
No 33
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=99.12 E-value=7.1e-11 Score=90.34 Aligned_cols=51 Identities=22% Similarity=0.543 Sum_probs=45.8
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|+.|+||++..
T Consensus 3 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 53 (58)
T 1uti_A 3 WARALYDFEALEED-------ELGFRSGEVVEVLDSSNPSWWTGRL---HNKLGLFPANYV 53 (58)
T ss_dssp EEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGE
T ss_pred EEEECccCCCCCcC-------CCCCCCCCEEEEEEECCCCEEEEEE---CCeEEEeeHHHe
Confidence 68999999998764 6999999999999999999999998 478999998754
No 34
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=99.11 E-value=9e-11 Score=91.19 Aligned_cols=54 Identities=26% Similarity=0.547 Sum_probs=47.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+++|+|||.+..++ +|+|++||+|.|+++.+++||.|++ .+..|+||+...
T Consensus 4 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 57 (62)
T 1uj0_A 4 MARRVRALYDFEAVEDN-------ELTFKHGELITVLDDSDANWWQGEN---HRGTGLFPSNFV 57 (62)
T ss_dssp CCEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGE
T ss_pred CCeEEEECccCCCCCcC-------CcCCCCCCEEEEEEeCCCCEEEEEE---CCCEEEechhHE
Confidence 35579999999998765 5999999999999999999999998 367999998764
No 35
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=99.11 E-value=7.4e-11 Score=91.11 Aligned_cols=53 Identities=21% Similarity=0.387 Sum_probs=46.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChh
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPV 108 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~ 108 (510)
...+++|+|||.+..++ +|+|++||+|.|+++.+++||.|++ +++.|+||+..
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~y 57 (60)
T 2gnc_A 5 SPEFAIAKFDYVGRSAR-------ELSFKKGASLLLYHRASEDWWEGRH---NGIDGLVPHQY 57 (60)
T ss_dssp -CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEEEGGG
T ss_pred CCEEEEECCCCCcCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCeEEEEeHhh
Confidence 35679999999998765 5999999999999998899999998 47999999875
No 36
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=99.11 E-value=5.1e-11 Score=96.43 Aligned_cols=61 Identities=23% Similarity=0.497 Sum_probs=50.6
Q ss_pred hhhccCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 39 EKARAKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 39 ~~a~~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
++.-..+...++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ .++.|+||+...
T Consensus 9 ~~~~~~~~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~Vl~~~~~gWw~g~~---~g~~G~fP~~yV 69 (72)
T 2l0a_A 9 SHMNHQHEARKVRAIYDFEAAEDN-------ELTFKAGEIITVLDDSDPNWWKGET---HQGIGLFPSNFV 69 (72)
T ss_dssp CCCCSCCCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEC---SSCEEECTTCCE
T ss_pred cccCCCCCCeEEEECCccCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCCEEEechhhC
Confidence 343345566789999999998765 5999999999999999999999997 357999998753
No 37
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=99.11 E-value=7.7e-11 Score=89.84 Aligned_cols=52 Identities=25% Similarity=0.587 Sum_probs=45.9
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
++||+|||.+..++ +|+|++||+|.|+++.+++||.|+.. +|+.|+||++..
T Consensus 3 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv 54 (57)
T 1cka_A 3 YVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYV 54 (57)
T ss_dssp EEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEECT--TSCEEEEEGGGE
T ss_pred EEEECCcCCCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEeC--CCCEEEEeHHHE
Confidence 68999999998765 59999999999999999999999964 478999999754
No 38
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=99.11 E-value=8.4e-11 Score=96.18 Aligned_cols=58 Identities=22% Similarity=0.345 Sum_probs=49.5
Q ss_pred cCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCC-ceEEEEccCCCceeeecChhHH
Q psy6613 43 AKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSN-WWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 43 ~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~-WWqar~v~~~~~~GlIPS~~~~ 110 (510)
......++||+|||.+..++ +|+|++||+|+|+++.+++ ||.|+. +|+.|+||+....
T Consensus 6 ~~~~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~gWw~g~~---~g~~G~fP~~yv~ 64 (80)
T 2i0n_A 6 SPEFAKYARALKDYNVSDTS-------LLPFKRNDIITITFKDQENKWFMGQL---NGKEGSFPVDHVE 64 (80)
T ss_dssp CCCCCCEEEESSCBCCCSSS-------SCCBCSSEEEEEEEESSSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CCCCCeEEEECCCCCcCCCC-------CcCCCCCCEEEEEEecCCCCEEEEEE---CCcEEEechHHEE
Confidence 34456789999999998765 5999999999999998888 999996 5789999998754
No 39
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=99.11 E-value=7.4e-11 Score=91.95 Aligned_cols=56 Identities=23% Similarity=0.490 Sum_probs=48.3
Q ss_pred CCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 44 KNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 44 k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.....+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +++.|+||+...
T Consensus 6 ~~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 61 (65)
T 3ulr_B 6 SDLGITAIALYDYQAAGDD-------EISFDPDDIITNIEMIDDGWWRGVC---KGRYGLFPANYV 61 (65)
T ss_dssp SSCCSCEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGE
T ss_pred CCCceEEEEEeeECCCCcC-------EeeEecCCEEEEEEecCCCEEEEEE---CCcEEEEehHHe
Confidence 3445679999999998765 5999999999999999999999996 578999998754
No 40
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=99.10 E-value=9.5e-11 Score=91.34 Aligned_cols=54 Identities=22% Similarity=0.574 Sum_probs=47.4
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+...
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 58 (64)
T 2ak5_A 5 SQLVVRAKFNFQQTNED-------ELSFSKGDVIHVTRVEEGGWWEGTH---NGRTGWFPSNYV 58 (64)
T ss_dssp CCCEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGE
T ss_pred CCEEEEEccccCCcCcC-------cccCCCCCEEEEeEecCCCEEEEEE---CCCEEEEehHHe
Confidence 35679999999998764 6999999999999999999999997 578999998764
No 41
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=99.10 E-value=1.1e-10 Score=89.08 Aligned_cols=53 Identities=23% Similarity=0.573 Sum_probs=47.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|+|+++.+++||.+++ +++.|+||+...
T Consensus 3 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 55 (58)
T 2drm_A 3 GIQVKALYDYDAQTGD-------ELTFKEGDTIIVHQKDPAGWWEGEL---NGKRGWVPANYV 55 (58)
T ss_dssp CEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGE
T ss_pred CcEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHE
Confidence 4579999999998765 5999999999999999999999998 579999998754
No 42
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=99.10 E-value=1e-10 Score=89.63 Aligned_cols=51 Identities=18% Similarity=0.383 Sum_probs=45.8
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +++.|+||++..
T Consensus 4 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 54 (58)
T 1zx6_A 4 YVEALYQFDPQQDG-------DLGLKPGDKVQLLEKLSPEWYKGSC---NGRTGIFPANYV 54 (58)
T ss_dssp EEEECSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGE
T ss_pred EEEECceECCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCcEEEeeHHHE
Confidence 68999999998765 6999999999999999999999997 578999998754
No 43
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=99.10 E-value=9.1e-11 Score=90.61 Aligned_cols=53 Identities=11% Similarity=0.365 Sum_probs=46.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|+.|+||++..
T Consensus 4 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 56 (60)
T 1w70_A 4 HMRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFV 56 (60)
T ss_dssp SCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGE
T ss_pred CcEEEECccCCcCCCC-------CccCCCCCEEEEEEeCCCCeEEEEE---CCCEEEechHHE
Confidence 3468999999998765 5999999999999999999999997 478999998753
No 44
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=99.10 E-value=9.5e-11 Score=89.50 Aligned_cols=52 Identities=23% Similarity=0.489 Sum_probs=46.1
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+++|+|||.+..++ +|+|++||+|.|+++.+++||.|++ +|+.|+||+...
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 54 (58)
T 1sem_A 3 KFVQALFDFNPQESG-------ELAFKRGDVITLINKDDPNWWEGQL---NNRRGIFPSNYV 54 (58)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEEE---TTEEEEEEGGGE
T ss_pred eEEEECcCCCCCCCC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCcEEEechHHe
Confidence 368999999998764 6999999999999999999999998 479999998754
No 45
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=99.10 E-value=9.8e-11 Score=93.44 Aligned_cols=55 Identities=20% Similarity=0.397 Sum_probs=47.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ +|+|++||+|.|+++ +++||.|+.. +|+.|+||++...
T Consensus 3 ~~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~-~~~Ww~~~~~--~g~~G~~Psnyv~ 57 (67)
T 2b86_A 3 EEVIVIAKWDYTAQQDQ-------ELDIKKNERLWLLDD-SKTWWRVRNA--ANRTGYVPSNYVE 57 (67)
T ss_dssp CCEEEEESSCBCCSSTT-------SCCBCTTCEEEEEEC-SSSSCEEECT--TSCEEECCCCSEE
T ss_pred CCeEEEEeeeECCCCCC-------ccccCCCCEEEEEec-CCCeEEEEeC--CCCEEEeChHHEe
Confidence 35689999999998775 599999999999999 4799999975 4789999998653
No 46
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.10 E-value=1e-10 Score=90.79 Aligned_cols=54 Identities=15% Similarity=0.346 Sum_probs=47.1
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+++|+|||.+..++ +|+|++||+|+|+++.+++||.|+. +|+.|+||+...
T Consensus 4 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 57 (62)
T 1k4u_S 4 KGSQVEALFSYEATQPE-------DLEFQEGDIILVLSKVNEEWLEGES---KGKVGIFPKVFV 57 (62)
T ss_dssp CCEEEECCSCBCCCSSS-------BCCBCSSCEEEEEEESSSSCEEEEC---SSCEEEECGGGC
T ss_pred CCeEEEECCCCCcCCCC-------CccCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEeHHHE
Confidence 34579999999998765 5999999999999999999999995 578999998764
No 47
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=99.09 E-value=9.1e-11 Score=89.88 Aligned_cols=53 Identities=26% Similarity=0.505 Sum_probs=46.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+||+|||.+..++ +|+|++||+|+|+++.+++||.|+... .|+.|+||+...
T Consensus 2 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 54 (58)
T 1jo8_A 2 WATAEYDYDAAEDN-------ELTFVENDKIINIEFVDDDWWLGELEK-DGSKGLFPSNYV 54 (58)
T ss_dssp CEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEETT-TCCEEEEEGGGE
T ss_pred EEEECceECCCCCC-------CcccCCCCEEEEEEecCCCcEEEEECC-CCCEEEechHHe
Confidence 47899999998765 599999999999999999999999853 378999998753
No 48
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=99.09 E-value=1.2e-10 Score=91.95 Aligned_cols=51 Identities=18% Similarity=0.393 Sum_probs=45.8
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
++||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|+.|+||++..
T Consensus 3 ~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv 53 (65)
T 2nwm_A 3 AARLKFDFQAQSPK-------ELTLQKGDIVYIHKEVDKNWLEGEH---HGRLGIFPANYV 53 (65)
T ss_dssp EEEECSCBCCCSTT-------BCCBCTTCEEEEEECCTTTCEEEEE---TTEEEEECGGGE
T ss_pred EEEEeeeECCCCcC-------ccCCcCCCEEEEEEecCCCEEEEEE---CCcEEEEehhhE
Confidence 58999999998765 5999999999999999999999996 579999999765
No 49
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=99.09 E-value=1.1e-10 Score=89.32 Aligned_cols=53 Identities=25% Similarity=0.493 Sum_probs=46.7
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||++...
T Consensus 4 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 56 (58)
T 1zlm_A 4 KVFRALYTFEPRTPD-------ELYFEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYVA 56 (58)
T ss_dssp EEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred EEEEECccCCCCCCC-------CccCCCCCEEEEEEeCCCCEEEEEE---CCCEEEEehHHEE
Confidence 468999999998764 6999999999999999999999997 5789999998643
No 50
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=99.09 E-value=9.1e-11 Score=89.86 Aligned_cols=52 Identities=21% Similarity=0.525 Sum_probs=45.9
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+.++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|+.|+||+...
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 53 (58)
T 2bz8_A 2 VEAIVEFDYQAQHDD-------ELTISVGEIITNIRKEDGGWWEGQI---NGRRGLFPDNFV 53 (58)
T ss_dssp CCEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTTEEEEEE---TTEEEEEEGGGE
T ss_pred EEEEECcccCCCCcC-------EeeECCCCEEEEEEeCCCCEEEEEE---CCeEEEEehHHe
Confidence 358899999998765 6999999999999999999999997 579999998764
No 51
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=99.09 E-value=1.2e-10 Score=88.83 Aligned_cols=52 Identities=25% Similarity=0.570 Sum_probs=46.2
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+...
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 54 (58)
T 2vwf_A 3 TYVQALFDFDPQEDG-------ELGFRRGDFIHVMDNSDPNWWKGAC---HGQTGMFPRNYV 54 (58)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGE
T ss_pred eEEEECceECCCCcC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCcEEEEchHHe
Confidence 368999999998765 6999999999999999999999998 578999998754
No 52
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=99.09 E-value=1.1e-10 Score=92.15 Aligned_cols=52 Identities=12% Similarity=0.217 Sum_probs=45.6
Q ss_pred eEEEEeeccCCC--CCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGS--IDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~--~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++||+|||.+. .++ +|+|++||+|.|+++.+++||.|+. +|+.|+||+...
T Consensus 2 ~~~~al~dy~~~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv 55 (67)
T 2bzy_A 2 VFAKAIQKRVPCAYDKT-------ALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHV 55 (67)
T ss_dssp EEEEECSCBCSEEECTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGE
T ss_pred cEEEEeeeECCCCCCCC-------ccccCCCCEEEEEEecCCCeEEEEe---CCcEEEEehHHe
Confidence 478999999997 543 6999999999999999999999976 578999999864
No 53
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.7e-10 Score=91.40 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=47.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..-++||+|||.+..++ +|+|++||+|+|+++.+++||.++. +++.|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 2dmo_A 6 SGEAHRVLFGFVPETKE-------ELQVMPGNIVFVLKKGNDNWATVMF---NGQKGLVPCNYL 59 (68)
T ss_dssp CSEEEEECSSCCCCSSS-------SCCCCTTCEEEECEECSSSCEEEEE---TTEEEEECSTTE
T ss_pred CCCEEEECcCCCcCCcC-------CCCCCCCCEEEEEEeCCCCEEEEEe---CCCEEEeehHHe
Confidence 34579999999998765 5999999999999999999999976 578999998764
No 54
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.08 E-value=1.4e-10 Score=93.41 Aligned_cols=59 Identities=19% Similarity=0.424 Sum_probs=49.3
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCce------eeecChhHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSEC------GFIPSPVKL 110 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~------GlIPS~~~~ 110 (510)
+...+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++..+.+.. |+||+....
T Consensus 5 ~~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~ 69 (77)
T 2d8j_A 5 SSGQYFVALFDYQARTAE-------DLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVA 69 (77)
T ss_dssp SCCEEEEESSCBCCSSSS-------BCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEE
T ss_pred CCCCEEEEccCCCCCCCC-------ccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHee
Confidence 345589999999998765 59999999999999999999999996432566 999997653
No 55
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=99.08 E-value=1.3e-10 Score=92.69 Aligned_cols=53 Identities=19% Similarity=0.418 Sum_probs=47.0
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.++||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|+.|+||+....
T Consensus 4 ~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 56 (68)
T 2ew3_A 4 PCCRGLYDFEPENQG-------ELGFKEGDIITLTNQIDENWYEGMI---HGESGFFPINYVE 56 (68)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEEESSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CEEEEeeeECCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEeeHHHEE
Confidence 368999999998765 5999999999999999999999997 5799999998654
No 56
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=99.08 E-value=1.4e-10 Score=89.34 Aligned_cols=53 Identities=26% Similarity=0.564 Sum_probs=46.7
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+...
T Consensus 5 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 57 (60)
T 2xmf_A 5 SPQCKALYAYDAQDTD-------ELSFNANDIIDIIKEDPSGWWTGRL---RGKQGLFPNNYV 57 (60)
T ss_dssp SCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGE
T ss_pred CcEEEECccCCcCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCEEEEEcHHHE
Confidence 3468999999998764 5999999999999999999999998 578999998753
No 57
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=99.08 E-value=1.5e-10 Score=91.10 Aligned_cols=57 Identities=21% Similarity=0.376 Sum_probs=48.5
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
|....+||+|||.+..++ +|+|++||+|.|+++.+++||.|++.+ .++.|+||+...
T Consensus 4 p~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 60 (67)
T 2o9s_A 4 PFTGEAIAKFNFNGDTQV-------EMSFRKGERITLLRQVDENWYEGRIPG-TSRQGIFPITYV 60 (67)
T ss_dssp TTSEEEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEECTT-SSCEEEEEGGGE
T ss_pred CCCEEEEECccCCcCCcC-------ccCCCCCCEEEEEEecCCCEEEEEECC-CCCEEEEChHHe
Confidence 345679999999998765 599999999999999999999999854 258999998754
No 58
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=95.51 Aligned_cols=56 Identities=27% Similarity=0.509 Sum_probs=48.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ .+..|+||+.....
T Consensus 16 ~~~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 71 (88)
T 1x2q_A 16 VARKVRALYDFEAVEDN-------ELTFKHGEIIIVLDDSDANWWKGEN---HRGIGLFPSNFVTT 71 (88)
T ss_dssp CCEEEEESSCCCCCSSS-------CCCCCSSCEEEEEECSCSSSEEEEE---TTEEEEECGGGEES
T ss_pred CCeEEEEcccCCCCCcC-------ccCCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEehHHEEE
Confidence 45689999999998775 5999999999999999999999998 36799999987643
No 59
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=99.07 E-value=1.7e-10 Score=91.97 Aligned_cols=57 Identities=25% Similarity=0.453 Sum_probs=48.6
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++.. +++.|+||+...
T Consensus 13 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 69 (73)
T 3h0h_A 13 TGVTLFVALYDYEAITED-------DLSFHKGEKFQILNSSEGDWWEARSLT-TGETGYIPSNYV 69 (73)
T ss_dssp STTCEEEESSCBCCSSTT-------BCCBCTTCEEEEEECSSSSEEEEEETT-TCCEEEEEGGGE
T ss_pred CCCEEEEECccCCCCCCC-------cceEeCCCEEEEEEecCCCeEEEEECC-CCCEEEEEHHHe
Confidence 334578899999998765 699999999999999999999999863 468999998764
No 60
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=99.07 E-value=1.4e-10 Score=90.15 Aligned_cols=52 Identities=21% Similarity=0.428 Sum_probs=45.7
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+.+||+|||.+..++ +|+|++||+|.|+++ .+++||.|+. +|+.|+||+...
T Consensus 2 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv 54 (62)
T 2j6f_A 2 VDYIVEYDYDAVHDD-------ELTIRVGEIIRNVKKLQEEGWLEGEL---NGRRGMFPDNFV 54 (62)
T ss_dssp CCEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSTTEEEEEE---TTEEEEEEGGGE
T ss_pred EEEEECccCCcCCcC-------CcCCcCCCEEEEEEecCCCCEEEEEE---CCcEEEechHHE
Confidence 348999999998765 599999999999999 8899999996 579999998764
No 61
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=2.2e-10 Score=91.74 Aligned_cols=56 Identities=27% Similarity=0.497 Sum_probs=47.8
Q ss_pred CCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee---cCCCceEEEEccCCCceeeecChhH
Q psy6613 44 KNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK---YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 44 k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~---~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+...++||+|||.+..++ +|+|++||+|+|+++ .+++||.|+. +++.|+||+...
T Consensus 5 ~~~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv 63 (73)
T 2dl7_A 5 SSGVCFVKALYDYEGQTDD-------ELSFPEGAIIRILNKENQDDDGFWEGEF---NGRIGVFPSVLV 63 (73)
T ss_dssp CCCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCCSSSSSCEEEEE---TTEEEEECSSSE
T ss_pred CCCCEEEEECccCCcCCCC-------cCCCCCCCEEEEEECCCCCCCCcEEEEE---CCCEEEEChHHE
Confidence 3456689999999998765 599999999999998 4889999996 578999998764
No 62
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=99.06 E-value=1.3e-10 Score=91.87 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=45.5
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++||+|||.+..++ ..+|+|++||+|+|+++.+++||.|+. +|+.|+||+...
T Consensus 7 ~~~~alydy~~~~~~-----~~eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv 60 (67)
T 2eyx_A 7 IYARVIQKRVPNAYD-----KTALALEVGELVKVTKINVSGQWEGEC---NGKRGHFPFTHV 60 (67)
T ss_dssp CBEEECCCBCCCTTC-----SSBCCBCSSEEEEEEEECTTSEEEEEE---TTEEEEEEGGGB
T ss_pred EEEEEeEEECCCCCC-----CCccccCCCCEEEEEEecCCCEEEEEE---CCCEEEEehHhE
Confidence 468999999998221 237999999999999999999999977 579999998764
No 63
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.06 E-value=2.2e-10 Score=93.16 Aligned_cols=57 Identities=23% Similarity=0.423 Sum_probs=48.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCC--CceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEG--SECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~--~~~GlIPS~~~~ 110 (510)
..++||+|||.+..++ +|+|++||+|+|+++.+++||.|++..++ ++.|+||+....
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~ 65 (80)
T 1ue9_A 7 GEIAQVTSAYVASGSE-------QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVK 65 (80)
T ss_dssp CEEEEECSCCCCCSTT-------BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEE
T ss_pred CeEEEECcccCCCCCC-------CCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeE
Confidence 4578999999998765 59999999999999999999999997443 589999998653
No 64
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=99.06 E-value=1.8e-10 Score=91.39 Aligned_cols=55 Identities=13% Similarity=0.282 Sum_probs=46.9
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 11 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 65 (72)
T 4glm_A 11 GALTYGVALYRFQALEPN-------ELDFEVGDKIRILATLEDGWLEGSL---KGRTGIFPYRFV 65 (72)
T ss_dssp --CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSTTEEEEEE---TTEEEEEEGGGE
T ss_pred CCCeEEEECccCCCCCCC-------cCCCCCCCEEEEEEccCCCEEEEEE---CCcEEEEChHHe
Confidence 345679999999998765 5999999999999999999999996 578999998764
No 65
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=99.06 E-value=1.7e-10 Score=89.47 Aligned_cols=53 Identities=11% Similarity=0.302 Sum_probs=46.4
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
++||+|||.+..++ +|+|++||+|.|+++.+++||.|++.. +++.|+||+...
T Consensus 5 ~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~fP~~yv 57 (62)
T 2fpe_A 5 THRAIFRFVPRHED-------ELELEVDDPLLVELQAEDYWYEAYNMR-TGARGVFPAYYA 57 (62)
T ss_dssp CEEECSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEEGGGE
T ss_pred EEEECccCCccCcC-------cCcCCCCCEEEEEEecCCCEEEEEECC-CCCEEEechHHE
Confidence 57899999998765 599999999999999999999999754 478999998764
No 66
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=99.05 E-value=1.5e-10 Score=92.20 Aligned_cols=56 Identities=18% Similarity=0.498 Sum_probs=47.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCce---eeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSEC---GFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~---GlIPS~~~ 109 (510)
...+++|+|||.+..++ +|+|++||+|+| ++.+++||.|++..++|+. |+||++..
T Consensus 9 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv 67 (72)
T 2kgt_A 9 LGPKYVGLWDFKSRTDE-------ELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYL 67 (72)
T ss_dssp CCCEEECCTTCBCSSTT-------SCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTS
T ss_pred CCcEEEEcccCCCCCcC-------CcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHE
Confidence 34579999999998765 599999999999 9889999999986544678 99999764
No 67
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=2e-10 Score=90.76 Aligned_cols=55 Identities=24% Similarity=0.485 Sum_probs=47.8
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 5 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 1x2k_A 5 SSGKVFRALYTFEPRTPD-------ELYFEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYV 59 (68)
T ss_dssp CCSEEEEESSCCCCCSTT-------BCCCCSSCEEEEEECSCSSEEEEES---SSCEEEEETTTE
T ss_pred CCcEEEEECceECCCCCC-------cccCCCCCEEEEEEcCCCCEEEEEE---CCcEEEEehHHe
Confidence 345579999999998764 6999999999999999999999996 578999998764
No 68
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=99.05 E-value=2.6e-10 Score=88.90 Aligned_cols=54 Identities=28% Similarity=0.578 Sum_probs=46.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++. +++||.|+. +|+.|+||+...
T Consensus 5 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv 60 (64)
T 2jte_A 5 AKEYCRTLFPYTGTNED-------ELTFREGEIIHLISKETGEAGWWKGEL---NGKEGVFPDNFA 60 (64)
T ss_dssp SSEEEEESSCBCCSSSS-------BCCBCTTCEEEEEESCSSSTTEEEEEE---TTEEEEEEGGGE
T ss_pred CCEEEEECccCCccCCC-------ccCCCCCCEEEEEECCCCCCCEEEEEE---CCeEEEEeHHHE
Confidence 34578999999998765 6999999999999985 789999997 579999998753
No 69
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=99.05 E-value=2.1e-10 Score=91.77 Aligned_cols=52 Identities=21% Similarity=0.475 Sum_probs=46.0
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
++||+|||.+..++ +|+|++||+|.|+++. +++||.|+. +|+.|+||+....
T Consensus 4 ~~~Alydy~a~~~~-------eLs~~~Gd~i~vl~~~~~~~gWw~g~~---~g~~G~~P~~yV~ 57 (69)
T 2ydl_A 4 YCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFVK 57 (69)
T ss_dssp EEEESSCBCCCSTT-------BCCBCTTCEEEEEESCCSSTTEEEEEE---TTEEEEEEGGGEE
T ss_pred EEEEcccCCCCCCC-------ccccCCCCEEEEEEcCCCCCCEEEEEE---CCcEEEecHHHEE
Confidence 68999999998765 5999999999999996 899999997 5799999998653
No 70
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=99.05 E-value=1.8e-10 Score=89.48 Aligned_cols=54 Identities=20% Similarity=0.510 Sum_probs=46.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +++.|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 59 (65)
T 3u23_A 6 KKRQCKVLFEYIPQNED-------ELELKVGDIIDINEEVEEGWWSGTL---NNKLGLFPSNFV 59 (65)
T ss_dssp --CEEEECSCBCCSSTT-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEEEGGGE
T ss_pred CCeEEEEeeeeCCCCcC-------CcCCCCCCEEEEEEecCCCEEEEEE---CCCEEEeehHHE
Confidence 34579999999998764 5999999999999999999999996 578999998754
No 71
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=99.05 E-value=2.7e-10 Score=89.90 Aligned_cols=54 Identities=17% Similarity=0.460 Sum_probs=47.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 2djq_A 6 SGPRAKALCNYRGKNPG-------DLKFNKGDVILLRRQLDENWYQGEI---NGVSGIFPASSV 59 (68)
T ss_dssp SCCEEEECSCCCSCCTT-------CCCCCTTCEEEEEECCCSSEEEEEE---TTEEEEEESSSE
T ss_pred CceEEEECCCCCCCCcC-------CccCCCCCEEEEEEecCCCEEEEEE---CCcEEEeehHHE
Confidence 34579999999998765 5999999999999999999999996 578999998764
No 72
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=99.04 E-value=2.1e-10 Score=95.12 Aligned_cols=58 Identities=14% Similarity=0.310 Sum_probs=47.2
Q ss_pred CCeeEEEEeecc-CCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccC---CCceeeecChhH
Q psy6613 45 NVAFAVRTNVKY-DGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKE---GSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY-~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~---~~~~GlIPS~~~ 109 (510)
....++||+||| .+..++ +|+|++||+|.|+++.+++||.|++.+. .++.|+||+...
T Consensus 16 ~~~~~~~Alydy~~a~~~~-------eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV 77 (83)
T 2ke9_A 16 RGSLKVRALKDFWNLHDPT-------ALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIV 77 (83)
T ss_dssp -CCEEEEESSCBCCCSCTT-------BCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGE
T ss_pred CCCeEEEEccccCCCCCCC-------cccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHE
Confidence 345689999999 666654 6999999999999999999999997531 258999998754
No 73
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=99.04 E-value=8.6e-11 Score=92.95 Aligned_cols=52 Identities=21% Similarity=0.550 Sum_probs=46.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ +|+.|+||+....
T Consensus 3 ~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~ 54 (65)
T 2fei_A 3 QCKVLFEYIPQNED-------ELELKVGDIIDINEEVEEGWWSGTL---NNKLGLFPSNFVK 54 (65)
T ss_dssp EEECSSCCCCCSTT-------BCCCCTTCEEECCCCSSSSEEEEES---SSCEEEEETTTSC
T ss_pred EEEECccCCcCCcC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEecHHHEE
Confidence 68999999998765 5999999999999999999999985 5789999997653
No 74
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=99.04 E-value=2.7e-10 Score=89.24 Aligned_cols=54 Identities=19% Similarity=0.310 Sum_probs=46.3
Q ss_pred eEEEEeeccCC-CCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDG-SIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~-~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+||+|||.+ ..++ +|+|++||+|.|++..+++||.|++.. +++.|+||++..
T Consensus 6 ~~~~alydy~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv 60 (65)
T 2j05_A 6 RRVRAILPYTKVPDTD-------EISFLKGDMFIVHNELEDGWMWVTNLR-TDEQGLIVEDLV 60 (65)
T ss_dssp CEEEESSCBCCCTTSS-------BCCBCTTCEEEEEEECTTSEEEEEETT-TCCEEEEEGGGE
T ss_pred cEEEEccccCCCCCCC-------cCcCCCCCEEEEeEecCCCEEEEEECC-CCCEEEEEhHHe
Confidence 46899999999 6654 699999999999999999999999653 478999999764
No 75
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=2.6e-10 Score=94.85 Aligned_cols=55 Identities=11% Similarity=0.174 Sum_probs=46.7
Q ss_pred CeeEEEEeeccCCC--CCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGS--IDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~--~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+. .++ +|+|++||+|+|+++.+++||.|++ +++.|+||+....
T Consensus 15 ~~~~~~alydy~~~a~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~fP~~yv~ 71 (88)
T 2dbk_A 15 GPVFAKAIQKRVPCAYDKT-------ALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHVK 71 (88)
T ss_dssp CCEEEEECSCBCCCTTCSS-------BCCBCTTCEEEEEEECTTSCEEEEC---SSCEEEECTTTEE
T ss_pred CCEEEEEcccccCCCCCCC-------cccCCCCCEEEEEEecCCCEEEEEe---CCCEEEEehHHeE
Confidence 34579999999965 543 6999999999999999999999976 4789999998753
No 76
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=99.04 E-value=2.5e-10 Score=87.88 Aligned_cols=52 Identities=19% Similarity=0.459 Sum_probs=45.4
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++||+|||.+..++ +|+|++||+|+|+++. +++||.|++ +++.|+||+...
T Consensus 4 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv 57 (60)
T 1oot_A 4 PKAVALYSFAGEESG-------DLPFRKGDVITILKKSDSQNDWWTGRV---NGREGIFPANYV 57 (60)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSCTTSEEEEEE---TTEEEEEEGGGE
T ss_pred cEEEECccCCcCCcC-------EeeEcCCCEEEEEEeCCCCCCeEEEEE---CCEEEEEeHHHE
Confidence 468999999998764 6999999999999986 789999998 579999998753
No 77
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=3.1e-10 Score=91.74 Aligned_cols=56 Identities=16% Similarity=0.373 Sum_probs=47.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCC-CceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEG-SECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~-~~~GlIPS~~~~ 110 (510)
..++||+|||.+. ++ +|+|++||+|+|+++.+++||.+++...+ ++.|+||+...+
T Consensus 10 ~~~~~alydy~~~-~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~ 66 (75)
T 2egc_A 10 KDVYVSIADYEGD-EE-------TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLE 66 (75)
T ss_dssp CEEEEECSCBCCC-SS-------SCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEE
T ss_pred CeEEEECCCcCCC-CC-------cCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCE
Confidence 4568999999997 53 59999999999999999999999997543 589999998754
No 78
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=99.04 E-value=3e-10 Score=91.59 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=46.0
Q ss_pred CeeEEEEeeccCCC--CCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGS--IDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~--~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+. .+ .+|+|++||+|.|+++.+++||.|+. +++.|+||+...
T Consensus 8 ~~~~~~alydy~~~~~~~-------~eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv 63 (73)
T 2ebp_A 8 FCGRARVHTDFTPSPYDT-------DSLKLKKGDIIDIISKPPMGTWMGLL---NNKVGTFKFIYV 63 (73)
T ss_dssp CSEEEEECSCBCCCTTCC-------SBCCBCSSCEEEEEECCSSSCEEEEC---SSCEEEECSTTE
T ss_pred cceEEEEeeccCCCCCCC-------CccCCCCCCEEEEEEeCCCCeEEEEE---CCCEEEEeHHHE
Confidence 44579999999985 43 36999999999999999999999986 478999999764
No 79
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=99.04 E-value=2.3e-10 Score=91.07 Aligned_cols=57 Identities=18% Similarity=0.327 Sum_probs=47.9
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEe-ecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKE-KYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~-~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
....++|+|||.+..++ +|+|++||+|+|++ ..+++||.|++. +|+.|+||++...+
T Consensus 10 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 67 (71)
T 1csk_A 10 SGTECIAKYNFHGTAEQ-------DLPFCKGDVLTIVAVTKDPNWYKAKNK--VGREGIIPANYVQK 67 (71)
T ss_dssp -CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSTTEEEEECT--TSCEEEEETTSEEC
T ss_pred CCCEEEEceeECcCCCC-------cCCCCCCCEEEEeECCCCCCCEEEEeC--CCCEEEEehHHeEE
Confidence 34579999999998765 59999999999999 788999999953 57899999986543
No 80
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=1.5e-10 Score=95.67 Aligned_cols=57 Identities=16% Similarity=0.265 Sum_probs=49.0
Q ss_pred CCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee--cCCCceEEEEccCCCceeeecChhHH
Q psy6613 44 KNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK--YDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 44 k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~--~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
+....++||+|||.+..++ +|+|++||+|+|+++ .+++||.|++ ++..|+||+....
T Consensus 5 ~~~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~fP~~yv~ 63 (85)
T 2dlp_A 5 SSGSGYVIALRSYITDNCS-------LLSFHRGDLIKLLPVATLEPGWQFGSA---GGRSGLFPADIVQ 63 (85)
T ss_dssp SSCCCEEEESSCBCCSSSS-------BCCBCTTCEEEECCCSCCCTTEEEEES---SSCEEEEETTSEE
T ss_pred CcCCEEEEECCCCCccCcC-------CccCcCCCEEEEEEccCCCCCeEEEEE---CCEEEEechHHeE
Confidence 3456789999999998765 699999999999998 8999999987 4789999998754
No 81
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=99.04 E-value=1.7e-10 Score=89.71 Aligned_cols=54 Identities=19% Similarity=0.411 Sum_probs=46.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccC--C---CceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKE--G---SECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~--~---~~~GlIPS~~~ 109 (510)
+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+...+ + +..|+||+...
T Consensus 3 ~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv 61 (65)
T 2oaw_A 3 LVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 61 (65)
T ss_dssp EEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGE
T ss_pred EEEEcccCCccCCC-------CCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHe
Confidence 68999999998764 6999999999999999999999998521 1 68999998754
No 82
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.04 E-value=1.4e-10 Score=98.35 Aligned_cols=62 Identities=16% Similarity=0.222 Sum_probs=50.3
Q ss_pred eeEEEEeeccCCCCCCCCCC-CCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPV-HGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc-~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||++..++..|| .+.+|+|++||+|+|+++ .+++||+|++ +++.|+||+....+
T Consensus 17 ~~~~~Alydy~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 80 (97)
T 2csq_A 17 ARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGET---CARLGLIPCNMVSE 80 (97)
T ss_dssp CEEEECSSCBCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEE---TTEEEEEETTTSEE
T ss_pred ceEEEEccccCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEE---CCcEEEEehHHeEE
Confidence 45789999999986554444 466899999999999976 4466999998 47999999987643
No 83
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=2.3e-10 Score=90.60 Aligned_cols=53 Identities=15% Similarity=0.431 Sum_probs=46.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 2dl4_A 7 GNTYVALYKFVPQENE-------DLEMRPGDIITLLEDSNEDWWKGKI---QDRIGFFPANFV 59 (68)
T ss_dssp CCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCCSSEEEEEC---SSCEEEEETTTE
T ss_pred CCEEEEeeeECCCCcC-------CcCCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEehHHe
Confidence 3468999999998764 6999999999999999999999995 568999998764
No 84
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.04 E-value=1.9e-10 Score=97.37 Aligned_cols=63 Identities=11% Similarity=0.173 Sum_probs=51.6
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEE-eecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIK-EKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~-~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
...++||+|||++..+ -.++.+.+|+|++||+|+|+ ++.+++||+|+.. +++.|+||+....+
T Consensus 16 ~~~~~~Alydy~~~~~-~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~--~g~~G~~Psnyv~~ 79 (96)
T 1wie_A 16 KVHLCVARYSYNPFDG-PNENPEAELPLTAGKYLYVYGDMDEDGFYEGELL--DGQRGLVPSNFVDF 79 (96)
T ss_dssp CEEEEEESSCCCGGGS-SCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEET--TCCBCBCCTTSEEC
T ss_pred CCcEEEECCccCCCcc-cCCCCCCeeeECCCCEEEEeEecCCCCEEEEEEC--CCCEEEEchHHEEE
Confidence 4567999999999862 23445678999999999999 7889999999973 47899999987643
No 85
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}
Probab=99.04 E-value=2.1e-10 Score=101.28 Aligned_cols=57 Identities=21% Similarity=0.354 Sum_probs=50.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.++++|+|||.+..++ +|+|++||+|.|+++.+++||.|+..+..|+.|+||++...
T Consensus 3 ~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~ 59 (120)
T 2kym_A 3 PLFAVTLYEFKAERDD-------ELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVR 59 (120)
T ss_dssp CCEEEECSCBCCCSTT-------CCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEE
T ss_pred CEEEEEcccCCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEE
Confidence 4689999999998875 59999999999999999999999986556789999988764
No 86
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=99.04 E-value=3.3e-10 Score=86.21 Aligned_cols=53 Identities=21% Similarity=0.427 Sum_probs=46.1
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
+.+||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +++.|+||+...+
T Consensus 2 ~~a~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv~ 54 (58)
T 4e6r_A 2 IPAFVXFAYVAERED-------ELSLVXGSRVTVMEXCSDGWWRGSY---NGQIGWFPSNYVL 54 (58)
T ss_dssp EEEEECSCBCCCSTT-------BCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred EEEEECccCCCCCCC-------EeeEeCCCEEEEeEcCCCCEEEEEE---CCcEEEEehHHEE
Confidence 468999999998765 5999999999999999999999965 5789999987653
No 87
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.7e-10 Score=91.10 Aligned_cols=54 Identities=22% Similarity=0.428 Sum_probs=47.6
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+...
T Consensus 8 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 61 (72)
T 2dl8_A 8 EPIEAIAKFDYVGRTAR-------ELSFKKGASLLLYQRASDDWWEGRH---NGIDGLIPHQYI 61 (72)
T ss_dssp SCEEEEESSCBCCSSSS-------BCCBCTTCEEEEEEEEETTEEEEEE---TTEEEEECSSSE
T ss_pred CCEEEEECccCCcCCCC-------EeccCCCCEEEEEeecCCCEEEEEE---CCEEEEEchHHe
Confidence 45689999999998764 5999999999999999999999998 579999998764
No 88
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=99.03 E-value=3.2e-09 Score=99.42 Aligned_cols=140 Identities=21% Similarity=0.224 Sum_probs=104.9
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------------hhhh-----h------------
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------------VLTE-----V------------ 188 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------------Fe~~-----I------------ 188 (510)
.|.++ +||+|+|||||.+.|.. .+ .+.+.+.+++|++ |... +
T Consensus 19 ~Gei~~l~GpnGsGKSTLl~~l~gl~~-~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~l~~~~~~~~n~~~ 97 (207)
T 1znw_A 19 VGRVVVLSGPSAVGKSTVVRCLRERIP-NLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLIDQGELLEWAEIHGGLHR 97 (207)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHST-TCEECCCEESSCCCTTCCBTTTBEECCHHHHHHHHHTTCEEEEEEEGGGTEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhhCC-ceEEcccccccCCcccccCCCeeEecCHHHHHHHHhcCCceeehhhcCchhh
Confidence 35555 99999999999999887 66 3445567777654 1100 0
Q ss_pred -cccHHHHHHHHHcCCeEEEEeccCCchhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHh
Q psy6613 189 -QTEIERVYELASTLQLVVLDCDTINHPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQ 265 (510)
Q Consensus 189 -~TslesI~~vi~sGKi~ILDID~qg~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq 265 (510)
.++.+.+++.+.++..|+++++..| +..++. ....+.+|+..|+...|.++...++.+.......++ +.-.++.+
T Consensus 98 ~g~~~~~~~~~~~~~~~~~~~l~~~g--l~~~~~~~~~~lS~l~~~p~~~~LDep~~~l~~~~d~~~~~~l~~~l~~l~~ 175 (207)
T 1znw_A 98 SGTLAQPVRAAAATGVPVLIEVDLAG--ARAIKKTMPEAVTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELAA 175 (207)
T ss_dssp EEEEHHHHHHHHHHTCCEEEECCHHH--HHHHHHHCTTSEEEEEECSCHHHHHHHHHTTSCSCHHHHHHHHHHHHHHHHG
T ss_pred cCCcHHHHHHHHHcCCeEEEEeCHHH--HHHHHHhcCCcEEEEEECCCHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhh
Confidence 0345678888899999999988877 554444 567788999999999999999998877666677777 65566654
Q ss_pred cCCCCccEEEeCCCHHHHHHHHHHH
Q psy6613 266 CPQEMFDVILDENQLEDACEHIAEY 290 (510)
Q Consensus 266 ~~~~~FD~VIvNDdLd~A~~eL~~i 290 (510)
. +.++++++++|++.++.....+
T Consensus 176 ~--~g~tvi~vtHdl~~~~~~~d~i 198 (207)
T 1znw_A 176 Q--GDFDKVVVNRRLESACAELVSL 198 (207)
T ss_dssp G--GGSSEEEECSSHHHHHHHHHHH
T ss_pred h--ccCcEEEECCCHHHHHHHHHHH
Confidence 3 4689999999999998777633
No 89
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=99.03 E-value=2.8e-10 Score=91.25 Aligned_cols=53 Identities=19% Similarity=0.463 Sum_probs=46.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ +|+.|+||++..
T Consensus 13 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 65 (73)
T 3c0c_A 13 QPSCKALYDFEPENDG-------ELGFREGDLITLTNQIDENWYEGML---HGQSGFFPLSYV 65 (73)
T ss_dssp SCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGE
T ss_pred CeEEEECccCCCCCCC-------CccCcCCCEEEEEEecCCCEEEEEE---CCCEEEeChHHE
Confidence 4578999999998765 5999999999999999999999997 579999998754
No 90
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=99.03 E-value=3.2e-10 Score=87.92 Aligned_cols=54 Identities=28% Similarity=0.443 Sum_probs=45.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|.|+++.+ +||.|++.. +|+.|+||+...
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~-~Ww~g~~~~-~g~~G~~P~~yv 59 (62)
T 2iim_A 6 DNLVIALHSYEPSHDG-------DLGFEKGEQLRILEQSG-EWWKAQSLT-TGQEGFIPFNFV 59 (62)
T ss_dssp TCEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCS-SEEEEEETT-TCCEEEEEGGGE
T ss_pred CcEEEEcccCCCCCCC-------CcCCCCCCEEEEEEcCC-CEEEEEECC-CCCEEEEEHHHE
Confidence 4579999999998764 69999999999999964 999999753 478999998764
No 91
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=2.4e-10 Score=90.73 Aligned_cols=55 Identities=20% Similarity=0.340 Sum_probs=47.3
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec---CCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY---DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~---d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...++||+|||.+..++ +|+|++||+|+|+++. +++||.|+. +++.|+||+...
T Consensus 5 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv 62 (71)
T 2cre_A 5 SSGLLARALYDNCPDCSD-------ELAFSRGDILTILEQHVPESEGWWKCLL---HGRQGLAPANRL 62 (71)
T ss_dssp CCCEEEEESSCCCCSSSS-------BCCCCSSCCEEEEESCCTTSTTEEEEES---SSCCEEEETTTE
T ss_pred CCcEEEEECcccCcCCCC-------CCCCCCCCEEEEeEcCCCCCCCcEEEEE---CCCEEEEehHHE
Confidence 345689999999998764 5999999999999997 899999994 578999998754
No 92
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.03 E-value=3.5e-10 Score=91.71 Aligned_cols=56 Identities=18% Similarity=0.425 Sum_probs=48.6
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
....++||+|||.+..++ +|+|++||+|.|+++.+++||.++. ++..|+||+....
T Consensus 5 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 60 (78)
T 2yuo_A 5 SSGRRAKALLDFERHDDD-------ELGFRKNDIITIISQKDEHCWVGEL---NGLRGWFPAKFVE 60 (78)
T ss_dssp CCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CCceEEEECccCCCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCCEEEEehHHEE
Confidence 345679999999998765 5999999999999999999999996 4789999998764
No 93
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=99.03 E-value=2.8e-10 Score=90.41 Aligned_cols=56 Identities=21% Similarity=0.488 Sum_probs=48.0
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee--cCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK--YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~--~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...+++|+|||.+..++ +|+|++||+|.|+++ .+++||.|+.. +|+.|+||+...
T Consensus 4 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv 61 (71)
T 1u5s_A 4 RVLHVVQTLYPFSSVTEE-------ELNFEKGETMEVIEKPENDPEWWKCKNA--RGQVGLVPKNYV 61 (71)
T ss_dssp CSSSEEEESSCCCCCSSS-------BCCCCSSCCEEEEECCCTTTCEEEEEET--TTEEEEEETTSE
T ss_pred CccEEEEEcccCCCCCCC-------cccCCCCCEEEEEECCCCCCCCEEEEeC--CCCEEEEeHHHE
Confidence 445679999999998765 599999999999999 78999999864 479999999764
No 94
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=99.03 E-value=2.4e-10 Score=87.35 Aligned_cols=53 Identities=15% Similarity=0.330 Sum_probs=46.1
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+||+|||.+..++ +|+|++||+|.|+++.+++||.|+..+ +++.|+||+...
T Consensus 3 ~~~al~d~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv 55 (59)
T 1yn8_A 3 RAVALYDFEPENDN-------ELRLAEGDIVFISYKHGQGWLVAENES-GSKTGLVPEEFV 55 (59)
T ss_dssp EEEECSCBCCCSTT-------BCCBCTTCEEEEEEEEETTEEEEECTT-SSCEEEEEGGGE
T ss_pred EEEECccCCCCCCC-------CcCCCCCCEEEEEEcCCCCeEEEEECC-CCCEEEEehHHe
Confidence 58999999998764 599999999999999999999999853 368999998753
No 95
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=99.03 E-value=3.2e-10 Score=87.39 Aligned_cols=52 Identities=15% Similarity=0.355 Sum_probs=45.9
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+++|+|||.+..++ +|+|++||+|.|+++.+++||.++. +|+.|+||+...
T Consensus 7 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~---~g~~G~~P~~yv 58 (62)
T 3ngp_A 7 ELVLVLYDYQEKSPR-------ELTVKKGDILTLLNSTNKDWWKIEV---NGRQGFVPAAYL 58 (62)
T ss_dssp CEEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGE
T ss_pred EEEEECcCCCCCCCC-------CccCCCCCEEEEeEecCCCeEEEEE---CCEEEEEEHHHE
Confidence 368999999998764 5999999999999999999999996 578999998754
No 96
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=99.02 E-value=2.8e-10 Score=89.93 Aligned_cols=57 Identities=18% Similarity=0.406 Sum_probs=48.7
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLEN 112 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~Er 112 (510)
.-+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. .+|+.|+||+....+.
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~--~~g~~G~~P~~yv~~~ 62 (69)
T 4esr_A 6 APTVVALYDYTANRSD-------ELTIHRGDIIRVFFKDNEDWWYGSI--GKGQEGYFPANHVASE 62 (69)
T ss_dssp CCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEE--ETTEEEEEEGGGEEEH
T ss_pred cCEEEECccCCCCCcC-------cCCCCCCCEEEEEEecCCCeEEEEe--CCCCEEEEchHHeEEC
Confidence 3468999999998764 5999999999999999999999987 2478999999876543
No 97
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=3.5e-10 Score=92.49 Aligned_cols=56 Identities=13% Similarity=0.402 Sum_probs=48.6
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
....++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ +++.|+||+....
T Consensus 8 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 63 (81)
T 2ysq_A 8 DSIVSAEAVWDHVTMANR-------ELAFKAGDVIKVLDASNKDWWWGQI---DDEEGWFPASFVR 63 (81)
T ss_dssp CCCEEEEESSCCCCSSSS-------SCCCCTTCEEEEEECCSSSEEEEEC---SSCEEEEEGGGEE
T ss_pred CCceEEEEeeeECCCCCC-------cCCCCCCCEEEEEEEcCcCEEEEEE---CCCEEEechHHEE
Confidence 346689999999998765 5999999999999999999999997 3789999987754
No 98
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=99.02 E-value=2.9e-10 Score=90.32 Aligned_cols=56 Identities=30% Similarity=0.669 Sum_probs=47.1
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+.+||+|+|.+..++ ..+|+|++||+|+|++. +++||.|+.. +|+.|+||++..
T Consensus 4 ~~~~~~alydy~~~~~~-----~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv 59 (70)
T 2vkn_A 4 FIYKAKALYPYDADDDD-----AYEISFEQNEILQVSDI-EGRWWKARRA--NGETGIIPSNYV 59 (70)
T ss_dssp CEEEEEESSCBCCCSSS-----TTBCCBCTTCEEEEECT-TSSEEEEECT--TSCEEEEEGGGE
T ss_pred cCEEEEECccCCCCCCC-----CCcccCCCCCEEEEEEc-CCCeEEEEEC--CCCEEEEehHHE
Confidence 46789999999998653 13699999999999987 7899999875 578999999764
No 99
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.02 E-value=2.3e-10 Score=90.52 Aligned_cols=55 Identities=20% Similarity=0.342 Sum_probs=46.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++. ++..|+||+...
T Consensus 6 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~~~~G~~P~~yv 60 (69)
T 2eqi_A 6 SGRTVKALYDYKAKRSD-------ELTFCRGALIHNVSKEPGGWWKGDYG--TRIQQYFPSNYV 60 (69)
T ss_dssp CCCEEEESSCBCCCSSS-------CCCBCTTCEEESCCCCSSSCEEEEET--TEEEEEECGGGE
T ss_pred CCcEEEECeeECCCCcC-------ccCCCCCCEEEEEEcCCCCeEEEEEC--CCCEEEEchHHc
Confidence 35679999999998765 59999999999999999999999973 345599999764
No 100
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=99.02 E-value=3.1e-10 Score=87.76 Aligned_cols=52 Identities=27% Similarity=0.520 Sum_probs=44.5
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCce-eeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSEC-GFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~-GlIPS~~~ 109 (510)
.++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ .+.. |+||+...
T Consensus 4 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~gG~~P~~yv 56 (61)
T 1y0m_A 4 SAVKALFDYKAQRED-------ELTFTKSAIIQNVEKQDGGWWRGDY---GGKKQLWFPSNYV 56 (61)
T ss_dssp CCEEESSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEEGGGE
T ss_pred CEEEECcCCCcCCCC-------CcCCcCCCEEEEEEecCCCEEEEEE---CCeEEEEEChHHc
Confidence 468999999998765 6999999999999999999999998 3455 49998754
No 101
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=99.01 E-value=4.2e-10 Score=86.30 Aligned_cols=54 Identities=15% Similarity=0.381 Sum_probs=46.3
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+++|+|||.+..++ +|+|++||+|.|+++ .+++||.++... +++.|+||++..
T Consensus 3 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 57 (60)
T 2v1q_A 3 ERGIVQYDFMAESQD-------ELTIKSGDKVYILDDKKSKDWWMCQLVD-SGKSGLVPAQFI 57 (60)
T ss_dssp CEEEECSCBCCCSTT-------BCCBCTTCEEEEEESSSCSSEEEEEETT-TCCEEEEEGGGE
T ss_pred cEEEEeeeECCCCCC-------CccCCCCCEEEEEeCCCCCCCEEEEECC-CCCEEEEEHHHE
Confidence 368999999998765 599999999999998 589999999853 468999998753
No 102
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=99.01 E-value=2.3e-10 Score=90.67 Aligned_cols=56 Identities=21% Similarity=0.387 Sum_probs=48.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....++|+|||.+..++ +|+|++||+|+|+++.+++||.+++.+. ++.|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~-g~~G~~P~~yv 61 (70)
T 2ecz_A 6 SGGEAIAKFNFNGDTQV-------EMSFRKGERITLLRQVDENWYEGRIPGT-SRQGIFPITYV 61 (70)
T ss_dssp CCBCEEESSCCCCCSTT-------BCCCCTTCBCEEEEEEETTEEEEEETTT-TEEEEECTTTE
T ss_pred CCCEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCeEEEEECCC-CCEEEEchHHE
Confidence 34568999999998765 5999999999999998999999999542 58999998764
No 103
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=99.01 E-value=3.3e-10 Score=91.40 Aligned_cols=56 Identities=14% Similarity=0.283 Sum_probs=48.2
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+||+|||.+..++ +|+|++||+|.|+++.+++||.|++.+ +|+.|+||++...
T Consensus 5 ~~~~~Alydy~a~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~~~-~g~~G~~P~~yv~ 60 (73)
T 2lcs_A 5 NQRAVALYDFEPENDN-------ELRLAEGDIVFISYKHGQGWLVAENES-GSKTGLVPEEFVS 60 (73)
T ss_dssp CEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEETTTEEEEECTT-SSCEEEEESTTEE
T ss_pred CCEEEECccCCCCCCC-------ccCCcCCCEEEEEEEcCCCEEEEEECC-CCCEEEeeHHHEE
Confidence 3578999999998765 599999999999999999999999853 3689999998754
No 104
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=99.01 E-value=5.1e-10 Score=88.77 Aligned_cols=55 Identities=15% Similarity=0.375 Sum_probs=47.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|+|+++. +++||.|++.. +++.|+||+...
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 61 (71)
T 2jt4_A 6 KKRGIVQYDFMAESQD-------ELTIKSGDKVYILDDKKSKDWWMCQLVD-SGKSGLVPAQFI 61 (71)
T ss_dssp CEEEEECSCBCCSSTT-------BCCBCTTCEEEEEESSSCSSEEEEEETT-TCCEEEEEGGGE
T ss_pred CCEEEEcccCCCCCCC-------cccCCCCCEEEEEECCCCCCCEEEEECC-CCCeEEechHHe
Confidence 4579999999998765 5999999999999987 89999999854 468999998765
No 105
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A
Probab=99.01 E-value=9.4e-11 Score=102.22 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=49.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++++|+|||.+..++ +|+|++||+|.|+++.|++||+|++.+..+..|+||++....
T Consensus 4 ~~~~~~Alydy~a~~~~-------ELsf~~Gd~i~vl~~~~~~Ww~g~~~g~~g~~G~fPsnYV~~ 62 (108)
T 2rqv_A 4 GSLYAIVLYDFKAEKAD-------ELTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSI 62 (108)
T ss_dssp SCCCEEESSCCCCCSSS-------BCCCCSSEEECCCCEETTTEEEECCSSSSCCCEEEESTTCBC
T ss_pred CCeEEEECCCcCCCCCC-------cCCcCCCCEEEEeEecCCCEEEEEECCccCCeeEeecceEEE
Confidence 34679999999999875 599999999999999999999999854335669999987643
No 106
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=99.01 E-value=4.5e-10 Score=85.58 Aligned_cols=53 Identities=17% Similarity=0.438 Sum_probs=45.2
Q ss_pred EEEEeecc-CCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKY-DGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY-~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++|+||| .+..++ +|+|++||+|.|+++.+++||.|++.. .++.|+||++..
T Consensus 2 ~~~al~d~~~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv 55 (58)
T 1zuy_A 2 MFEAAYDFPGSGSPS-------ELPLKKGDVIYITREEPSGWSLGKLLD-GSKEGWVPTAYM 55 (58)
T ss_dssp EEEESSCBCCCSCTT-------BCCBCTTCEEEEEEECTTSEEEEEESS-CSCEEEEEGGGE
T ss_pred EEEEecccCCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEecHHHE
Confidence 47899999 676553 699999999999999999999999863 378999998764
No 107
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=99.01 E-value=2.2e-10 Score=88.27 Aligned_cols=51 Identities=18% Similarity=0.449 Sum_probs=45.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+++|+|||.+..++ +|+|++||+|.|+++ +++||.++.. +|..|+||++..
T Consensus 3 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~~--~g~~G~~P~~yv 53 (60)
T 1i07_A 3 YAKSKYDFVARNSS-------ELSVMKDDVLEILDD-RRQWWKVRNA--SGDSGFVPNNIL 53 (60)
T ss_dssp EEEESSCBCCSSTT-------BCCBCTTCEEEECGG-GCCEEEEECT--TSCEEEEEGGGE
T ss_pred EEEECccCCCCCCC-------cccCCCCCEEEEEEc-CCCeEEEEEC--CCCEEEEEHHHe
Confidence 68999999998765 599999999999999 9999999975 478999999764
No 108
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=99.01 E-value=2.7e-10 Score=89.83 Aligned_cols=54 Identities=22% Similarity=0.319 Sum_probs=46.9
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+.. +++.|+||+....+
T Consensus 4 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 57 (67)
T 1gl5_A 4 IVVAMYDFQATEAH-------DLRLERGQEYIILEKNDLHWWRARDK--YGSEGYIPSNYVTG 57 (67)
T ss_dssp CEEECSCBCCSSSS-------BCCBCTTCEEEEEECSSSSEEEEECS--SSCEEEEETTSEES
T ss_pred EEEECccCCCCCCC-------eecCCcCCEEEEEEccCCCcEEEEEC--CCCEEEEEhHhEEE
Confidence 58999999998765 59999999999999999999999964 47899999986543
No 109
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.01 E-value=2.8e-10 Score=92.06 Aligned_cols=55 Identities=24% Similarity=0.468 Sum_probs=48.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+....
T Consensus 9 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 63 (76)
T 2epd_A 9 GVVEAVACFAYTGRTAQ-------ELSFRRGDVLRLHERASSDWWRGEH---NGMRGLIPHKYIT 63 (76)
T ss_dssp CCEEEEESSCEECSSTT-------BCEECTTCEEEEEEEEETTEEEEEE---TTEEEEEESSSEE
T ss_pred CCEEEEECcCCCCCCCC-------ccCCCCCCEEEEEEeCCCCEEEEEE---CCcEEEEehHHEE
Confidence 34679999999998764 5999999999999999999999998 5789999997653
No 110
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=99.00 E-value=3.5e-10 Score=93.92 Aligned_cols=56 Identities=16% Similarity=0.330 Sum_probs=47.6
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
+...+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|..|+||+....
T Consensus 15 ~~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~Vl~~~~~gWw~g~~---~g~~G~~P~~yv~ 70 (83)
T 1neg_A 15 TGKELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVK 70 (83)
T ss_dssp --CCEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CCceEEEEccccCCCCCC-------ccccCCCCEEEEEEecCCCEEEEEE---CCeEEEEEHHHEE
Confidence 345679999999998765 5999999999999999999999965 5789999998754
No 111
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=99.00 E-value=4.6e-10 Score=88.82 Aligned_cols=54 Identities=13% Similarity=0.351 Sum_probs=46.0
Q ss_pred EEEEeeccC-CCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 49 AVRTNVKYD-GSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 49 ~VRAlfdY~-~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.++|+|||+ +..++ +|+|++||+|.|+++.+++||.|++..+ |+.|+||+....
T Consensus 4 ~~~alydy~~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~~-g~~G~~P~~yv~ 58 (69)
T 1ruw_A 4 KFEAAYDFPGSGSSS-------ELPLKKGDIVFISRDEPSGWSLAKLLDG-SKEGWVPTAYMT 58 (69)
T ss_dssp EEEESSCBCCCSCTT-------BCCBCTTCEEEEEEECTTSEEEEEETTS-SCEEEEEGGGEE
T ss_pred EEEEccccCCCCCCC-------cccCCCCCEEEEEEecCCCeEEEEECCC-CCEEEEehHHeE
Confidence 478999996 76554 6999999999999999999999998532 789999998753
No 112
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=99.00 E-value=5.5e-10 Score=89.30 Aligned_cols=54 Identities=20% Similarity=0.434 Sum_probs=46.9
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|.|+++. +++||.|+. +|+.|+||+...
T Consensus 8 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv 63 (73)
T 2k9g_A 8 SKDYCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFV 63 (73)
T ss_dssp SCEEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSTTEEEEEE---TTEEEEEEGGGE
T ss_pred CccEEEECccCCCCCCC-------eeeECCCCEEEEEECCCCCCCEEEEEE---CCeEEEEchHHE
Confidence 35579999999998765 5999999999999985 899999997 579999998764
No 113
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=99.00 E-value=4.1e-10 Score=91.99 Aligned_cols=53 Identities=17% Similarity=0.401 Sum_probs=47.0
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ +++.|+||+....+
T Consensus 4 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 56 (80)
T 2pqh_A 4 LVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 56 (80)
T ss_dssp EEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEEE
T ss_pred EEEECccCCCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEehHHeEE
Confidence 68999999998765 6999999999999999999999998 46899999987643
No 114
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=3.8e-10 Score=92.20 Aligned_cols=55 Identities=15% Similarity=0.196 Sum_probs=46.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|+|++ .+++||.+++.. +++.|+||+....
T Consensus 17 ~~~~~Alydy~a~~~~-------eLs~~~Gd~i~v~~-~~~~Ww~~~~~~-~g~~G~~P~~yv~ 71 (79)
T 2cud_A 17 SDFLAVLSDYPSPDIS-------PPIFRRGEKLRVIS-DEGGWWKAISLS-TGRESYIPGICVA 71 (79)
T ss_dssp CCEEEESSCSSCTTTS-------CCSSCTTCEEEEEE-EETTEEEEEETT-TCCEEEEEGGGEE
T ss_pred CeEEEEccCCCCCCCC-------cCCCCCCCEEEEEe-cCCCeEEEEECC-CCCEEEeeHHHeE
Confidence 3479999999998775 59999999999999 578999999864 3689999998653
No 115
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=2.7e-10 Score=92.78 Aligned_cols=58 Identities=21% Similarity=0.471 Sum_probs=49.2
Q ss_pred cCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC--CCceEEEEccCCCceeeecChhHH
Q psy6613 43 AKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD--SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 43 ~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d--~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+...++||+|||.+..++ +|+|++||+|.|+++.+ ++||.|++ +++.|+||+....
T Consensus 13 ~~~~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 72 (80)
T 2d8h_A 13 NLNQPIEVTALYSFEGQQPG-------DLNFQAGDRITVISKTDSHFDWWEGKL---RGQTGIFPANYVT 72 (80)
T ss_dssp CCSSCEEEECSSCEECSSTT-------BCEECTTCEEEEEECCSCSSSEEEEEE---TTEEEEEEGGGCC
T ss_pred CCCCCEEEEECccCCcCCCC-------eeeEcCCCEEEEeECcCCCCCeEEEEE---CCEEEEEchhHeE
Confidence 34456789999999998765 59999999999999975 89999998 4799999987653
No 116
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=99.00 E-value=4.8e-10 Score=88.32 Aligned_cols=53 Identities=15% Similarity=0.360 Sum_probs=46.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|.|+++.+++||.++. +++.|+||+...
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 59 (68)
T 2dl3_A 7 GRPARAKFDFKAQTLK-------ELPLQKGDIVYIYKQIDQNWYEGEH---HGRVGIFPRTYI 59 (68)
T ss_dssp SEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSTTEEEEEC---SSCEEEEETTTE
T ss_pred CcEEEECccCCCCCcC-------CccCCCCCEEEEeEecCCCEEEEEE---CCCEEEEchHHE
Confidence 4579999999998765 5999999999999999999999995 578999998764
No 117
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=99.00 E-value=3.3e-10 Score=91.39 Aligned_cols=55 Identities=18% Similarity=0.449 Sum_probs=48.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+....
T Consensus 9 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 63 (76)
T 1ujy_A 9 HQLIVKARFNFKQTNED-------ELSVCKGDIIYVTRVEEGGWWEGTL---NGRTGWFPSNYVR 63 (76)
T ss_dssp CCEEEECCSCBCCSSTT-------SCCBCSSCCEEESSCCSSSCEEEEE---TTEEEEECTTTSE
T ss_pred CCEEEEECccCCcCCCC-------cccCCCCCEEEEEEecCCCEEEEEE---CCCEEEechHHEE
Confidence 45689999999998765 5999999999999999999999997 5789999988654
No 118
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=99.00 E-value=4.3e-10 Score=84.90 Aligned_cols=50 Identities=24% Similarity=0.422 Sum_probs=44.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-CCceEEEEccCCCceeeecChh
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-SNWWIGRLVKEGSECGFIPSPV 108 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-~~WWqar~v~~~~~~GlIPS~~ 108 (510)
.++|+|||.+..++ +|+|++||+|.|+++.+ ++||.|+. +++.|+||+..
T Consensus 2 ~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~---~g~~G~~P~~y 52 (54)
T 2a28_A 2 AMEAIYAYEAQGDD-------EISIDPGDIITVIRGDDGSGWTYGEC---DGLKGLFPTSY 52 (54)
T ss_dssp EEEBCSCBCCCSTT-------BCCBCTTCEEEEEECCCSSSEEEEEE---TTEEEEEEGGG
T ss_pred EEEECccCCcCCCC-------CccCCCCCEEEEEEecCCCCEEEEEE---CCeEEEeeHHH
Confidence 37899999998765 59999999999999986 79999998 57899999875
No 119
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=7.1e-10 Score=87.71 Aligned_cols=56 Identities=14% Similarity=0.331 Sum_probs=48.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+..++ +|+|++||+|+|+++.+++||.+++.. .++.|+||+...
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~~P~~yv 61 (70)
T 2ct3_A 6 SGTPYRAMYQYRPQNED-------ELELREGDRVDVMQQCDDGWFVGVSRR-TQKFGTFPGNYV 61 (70)
T ss_dssp CCEEEEESSCBCCSSTT-------BCCBCTTEEEEEEEECSSSCEEEEESS-SCCEEEECTTTE
T ss_pred CCcEEEECccCCcCCcC-------CccCCCCCEEEEEEECCCCEEEEEECC-CCCEEEechHHe
Confidence 35679999999998765 599999999999999999999999853 368999998764
No 120
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=98.99 E-value=4.7e-10 Score=89.44 Aligned_cols=53 Identities=17% Similarity=0.369 Sum_probs=46.5
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+++|+|||.+..++ +|+|++||+|.|+++.+++||.++. +++.|+||+....
T Consensus 6 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 58 (73)
T 3thk_A 6 ELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVK 58 (73)
T ss_dssp CEEEECSCBCCCSTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred EEEEECcCCCcCCCC-------ccCCCCCCEEEEEECCCCCeEEEEE---CCcEEEEehHHeE
Confidence 368999999998765 5999999999999999999999996 4689999988754
No 121
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=98.99 E-value=3.7e-10 Score=92.46 Aligned_cols=56 Identities=25% Similarity=0.478 Sum_probs=48.4
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
.++||+|||.+..++ +|+|++||+|.|+++.+++||.|++.. +|+.|+||+.....
T Consensus 6 ~~~~Alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 61 (79)
T 3cqt_A 6 TLFEALYDYEARTED-------DLSFHKGEKFQILNSSEGDWWEARSLT-TGETGYIPSIYLAP 61 (79)
T ss_dssp CCEEESSCBCCCSTT-------BCCBCTTCEEEEEECTTSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred cEEEECccCCCCCcC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEeehHHeEE
Confidence 468999999998764 699999999999999999999999864 46899999987643
No 122
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.99 E-value=3.7e-10 Score=90.89 Aligned_cols=55 Identities=22% Similarity=0.369 Sum_probs=45.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-----CCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-----SNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-----~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++.||+|+|.++.+++ +|+|++||+|.|+++.+ ++||.|++. +|+.|+||++..
T Consensus 7 ~~~~~aly~y~a~~~~d------ELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~--~G~~G~~PsnyV 66 (69)
T 1nm7_A 7 HHFARALYDFVPENPEM------EVALKKGDLMAILSKKDPLGRDSDWWKVRTK--NGNIGYIPYNYI 66 (69)
T ss_dssp --CEEECSCCCCSSTTS------CCCCCTTCEEEECCSSSSSCCSSSCEEEEET--TTEEEEECGGGE
T ss_pred eeEEEEEecccCCCCCC------ccCCCCCCEEEEEecCCCCCCCCCeeEEEeC--CCCEEEecHHHE
Confidence 46799999999987652 59999999999999976 499999984 478999999864
No 123
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=98.99 E-value=4.3e-10 Score=89.58 Aligned_cols=53 Identities=11% Similarity=0.302 Sum_probs=46.7
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
++||+|+|.+..++ +|+|++||+|.|+++.+++||.|++.. +++.|+||+...
T Consensus 8 ~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~gW~~g~~~~-~g~~G~fP~~yv 60 (71)
T 2fpf_A 8 THRAIFRFVPRHED-------ELELEVDDPLLVELQAEDYWYEAYNMR-TGARGVFPAYYA 60 (71)
T ss_dssp CEEECSCBCCSSTT-------BCCBCTTCEEEEEEECTTSEEEEEETT-TTEEEEEEGGGE
T ss_pred EEEECeeECccCCC-------cccCcCCcEEEEeEecCCCEEEEEECC-CCCEEEeehHHE
Confidence 58999999998765 599999999999999999999999754 478999998765
No 124
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=6e-10 Score=90.57 Aligned_cols=54 Identities=20% Similarity=0.364 Sum_probs=47.1
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~gWw~g~~---~g~~G~~P~~yv 69 (78)
T 2ed0_A 16 YLEKVVAIYDYTKDKED-------ELSFQEGAIIYVIKKNDDGWYEGVM---NGVTGLFPGNYV 69 (78)
T ss_dssp CSEEEEECSCBCCSSTT-------BCCBCSSCEEEEEEECSSSEEEEEE---TTEEEEEETTSE
T ss_pred cCEEEEECccCCccCcC-------cccccCCCEEEEEEeCCCCEEEEEE---CCcEEEeChHHE
Confidence 34579999999998764 6999999999999999999999996 578999998764
No 125
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=3.9e-10 Score=93.10 Aligned_cols=58 Identities=16% Similarity=0.272 Sum_probs=49.4
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
+...+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+.. +|+.|+||+....+
T Consensus 17 ~~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~~--~g~~G~~P~~yv~~ 74 (85)
T 2yuq_A 17 PEETVVIALYDYQTNDPQ-------ELALRRNEEYCLLDSSEIHWWRVQDR--NGHEGYVPSSYLVE 74 (85)
T ss_dssp SSSCEEEESSCCCCSCSS-------BCCCCBTEEEEEEECCSSSEEEEECS--SSCEEEEETTTCEE
T ss_pred CCCeEEEECcCCCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEEC--CCCEEEEehHHeEE
Confidence 344679999999998765 59999999999999999999999863 47899999987643
No 126
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=98.99 E-value=4.8e-10 Score=86.78 Aligned_cols=54 Identities=20% Similarity=0.404 Sum_probs=46.6
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+||+|||.+..++ +|+|++||+|.|+++.+++||.|++.. +++.|+||+...
T Consensus 7 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~~P~~yv 60 (64)
T 4f14_A 7 RTYRAMYDYSAQDED-------EVSFRDGDYIVNVQPIDDGWMYGTVQR-TGRTGMLPANYI 60 (64)
T ss_dssp -CEEESSCBCCCSTT-------BCCBCTTCEEEEEEECSSSEEEEEETT-TTEEEEEEGGGE
T ss_pred EEEEECeeeCCcCCC-------cCCCCCCCEEEEEEeCCCCeEEEEECC-CCCEEEEeHHHe
Confidence 458999999998765 599999999999999999999999863 468999998754
No 127
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=98.98 E-value=3.7e-10 Score=90.48 Aligned_cols=54 Identities=19% Similarity=0.423 Sum_probs=47.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++ +++.|+||+....
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 60 (73)
T 2dbm_A 7 GPCCRALYDFEPENEG-------ELGFKEGDIITLTNQIDENWYEGML---HGHSGFFPINYVE 60 (73)
T ss_dssp CCEEEESSCBCCCSTT-------CCCBCTTCEEECCBCSSSSEEEEEE---TTEEEEEESSSEE
T ss_pred CCEEEEccccCCCCCC-------CccCCCCCEEEEEEecCCCEEEEEE---CCCEEEechHHEE
Confidence 3478999999998765 5999999999999999999999997 5789999987653
No 128
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=6.6e-10 Score=90.82 Aligned_cols=55 Identities=29% Similarity=0.436 Sum_probs=48.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
...+||+|||.+..++ +|+|++||+|.|+++.+++||.+++ +++.|+||+....+
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~~ 62 (80)
T 2ekh_A 8 ATSYMTCSAYQKVQDS-------EISFPAGVEVQVLEKQESGWWYVRF---GELEGWAPSHYLVL 62 (80)
T ss_dssp CEEEEECSCBCCSSTT-------SCCBCTTCEEEEEEECTTSEEEEEE---TTEEEEEETTTEEC
T ss_pred CCEEEECCCCCCCCCC-------ccCcCCCCEEEEEEeCCCCeEEEEE---CCCEEEEEhHHeEE
Confidence 4568899999998775 5999999999999999999999997 47899999987653
No 129
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=98.98 E-value=5.3e-10 Score=88.48 Aligned_cols=54 Identities=19% Similarity=0.380 Sum_probs=47.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..-++||+|||.+..++ +|+|++||+|+|+++.+++||.+++ +++.|+||+...
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 60 (69)
T 2dil_A 7 GAQEYRALYDYTAQNPD-------ELDLSAGDILEVILEGEDGWWTVER---NGQRGFVPGSYL 60 (69)
T ss_dssp CCCEEECCSCBCCSSSS-------SCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGC
T ss_pred CCcEEEECccCCccCcC-------ccCCCCCCEEEEEECCCCCEEEEEE---CCCEEEEehHHe
Confidence 34478999999998765 5999999999999999999999998 478999998765
No 130
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.98 E-value=3.8e-10 Score=86.12 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=45.1
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-CCceEEEEccCCCceeeecChh
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-SNWWIGRLVKEGSECGFIPSPV 108 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-~~WWqar~v~~~~~~GlIPS~~ 108 (510)
.+||+|||.+..++ +|+|++||+|.|+++.+ ++||.+++.. +++.|+||++.
T Consensus 3 ~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~~~-~g~~G~~P~~y 55 (58)
T 1zuu_A 3 ENKVLYAYVQKDDD-------EITITPGDKISLVARDTGSGWTKINNDT-TGETGLVPTTY 55 (58)
T ss_dssp CCEECSCBCCCSTT-------BCCBCTTCCEEEEECCSSSSEEEEEETT-TTEEEEEEGGG
T ss_pred EEEEeeeECCcCCC-------cccCCCCCEEEEeEcCCCCCCEEEEECC-CCCEEEEEHHH
Confidence 47899999998765 69999999999999987 7999999853 46899999875
No 131
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=94.66 Aligned_cols=54 Identities=13% Similarity=0.346 Sum_probs=47.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|..|+||+...
T Consensus 17 ~~~~~~Alydy~a~~~~-------eLsf~~Gd~I~Vl~~~~~gWw~g~~---~g~~G~fP~nyV 70 (79)
T 1z9q_A 17 AAPRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFV 70 (79)
T ss_dssp SCCCEEESSCCCCSSTT-------BCCCCTTCCBCCCEESSSSEEEEEE---TTEEEEEEGGGE
T ss_pred CceEEEEcCccCCCCCC-------cccccCCCEEEEeEecCCCEEEEEE---CCeEEEecHHHE
Confidence 45579999999998765 5999999999999999999999997 478999998764
No 132
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=98.98 E-value=5e-10 Score=88.13 Aligned_cols=55 Identities=18% Similarity=0.242 Sum_probs=45.9
Q ss_pred eeEEEEeeccCC-CCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDG-SIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~-~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+ ..++ +|+|++||+|.|+++ .+++||.|++.+ .+..|+||+...
T Consensus 6 ~~~~~al~dy~a~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 62 (67)
T 2kxc_A 6 KQKVKTIFPHTAGSNKT-------LLSFAQGDVITLLIPEEKDGWLYGEHDV-SKARGWFPSSYT 62 (67)
T ss_dssp CCEEEESSCBCCSSCSS-------BCCBCTTCEEEESSSSCBTTEEEEEESS-SCCEEEEEGGGE
T ss_pred CEEEEEeecCCCCCCCC-------CCcCCCCCEEEEeECCCCCCcEEEEECC-CCCEEEEehHHe
Confidence 457899999995 5543 699999999999996 889999999853 368999998754
No 133
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=98.98 E-value=8.2e-10 Score=86.13 Aligned_cols=54 Identities=30% Similarity=0.469 Sum_probs=46.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|+|+++. ++||.|++.. ++..|+||+...
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~g~~~~-~g~~G~~P~~yv 60 (65)
T 1w1f_A 7 GDIVVALYPYDGIHPD-------DLSFKKGEKMKVLEEH-GEWWKAKSLL-TKKEGFIPSNYV 60 (65)
T ss_dssp CEEEEESSCBCCCSSS-------CCCBCTTCEEEEEEEC-SSEEEEEETT-TCCEEEEETTTE
T ss_pred CCEEEEceeECCcCCC-------cCCCCCCCEEEEEEcC-CCEEEEEECC-CCCEEEEEhhHE
Confidence 4579999999998765 5999999999999998 9999999864 468999998764
No 134
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=98.98 E-value=6.6e-10 Score=87.42 Aligned_cols=56 Identities=14% Similarity=0.245 Sum_probs=46.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++. .|+|++||+|.|+.. .+++||.|++.. +++.|+||++..
T Consensus 7 ~~~~~al~dy~~~~~~e------~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~-~g~~G~fP~~yv 63 (67)
T 3rnj_A 7 RMRVKAIFSHAAGDNST------LLSFKEGDLITLLVPEARDGWHYGESEK-TKMRGWFPFSYT 63 (67)
T ss_dssp CCEEEESSCBCCCSCTT------BCCBCTTCEEEECSSSCBTTEEEEEETT-TCCEEEEEGGGE
T ss_pred CeEEEEccccCCCCCCC------CccCCCCCEEEEeeccCCCCCEEEEECC-CCCEEEEEHHHe
Confidence 44799999999877542 499999999999965 688999999753 478999998753
No 135
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=2.6e-10 Score=90.96 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=46.7
Q ss_pred eeEEEEeeccCC-CCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDG-SIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~-~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+||+|||.+ ..++ +|+|++||+|.|+++.+++||.|++.. +++.|+||++..
T Consensus 7 ~~~~~Alydy~~~~~~~-------eLsf~~Gd~i~v~~~~~~~W~~g~~~~-~g~~G~~P~~yv 62 (71)
T 2gqi_A 7 GRRVRAILPYTKVPDTD-------EISFLKGDMFIVHNELEDGWMWVTNLR-TDEQGLIVEDLV 62 (71)
T ss_dssp CCCEEESSCCCCCTTSS-------CCCCCTTCBCCCCEECSSSCEEEECTT-TCCEEEECTTSE
T ss_pred CCEEEECcccCCCCCCC-------CCCCCCCCEEEEEEecCCCEEEEEECC-CCCEEEeeHHHE
Confidence 346899999999 6654 599999999999999999999999643 478999999764
No 136
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=98.97 E-value=4.6e-10 Score=89.71 Aligned_cols=55 Identities=25% Similarity=0.425 Sum_probs=47.4
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|.|+++. ++||.|++...+|+.|+||+...
T Consensus 11 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv 65 (74)
T 2m0y_A 11 EKYGVAFYNYDARGAD-------ELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYI 65 (74)
T ss_dssp CSCEEECSEECCCSSS-------BCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGE
T ss_pred CeEEEEceeeCCCCcC-------cccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHE
Confidence 4478999999998765 5999999999999995 78999999765679999998764
No 137
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.97 E-value=2.2e-10 Score=91.75 Aligned_cols=54 Identities=17% Similarity=0.269 Sum_probs=46.1
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEe-ecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKE-KYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~-~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|++ ..+++||.|+. +++.|+||+...
T Consensus 9 ~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv 63 (72)
T 1ugv_A 9 PFRKAKALYACKAEHDS-------ELSFTAGTVFDNVHPSQEPGWLEGTL---NGKTGLIPENYV 63 (72)
T ss_dssp SCCCEEESSCBCCCSSS-------BCCBCTTCEEBSCCBCSSTTEEEEES---SSCEEEEEGGGE
T ss_pred CccEEEEccccCCcCCC-------EeCCcCCCEEEEEEecCCCCeEEEEE---CCcEEEecHHHE
Confidence 34579999999998765 59999999999998 47889999985 578999998764
No 138
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=5.4e-10 Score=88.17 Aligned_cols=53 Identities=23% Similarity=0.451 Sum_probs=46.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++|+|||.+..++ +|+|++||+|.|+++.+++||.+++ +++.|+||+...
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 1x2p_A 7 GEEFVAIADYAATDET-------QLSFLRGEKILILRQTTADWWWGER---AGCCGYIPANHV 59 (68)
T ss_dssp CCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEC---TTCCEEEESSSE
T ss_pred CCEEEECceECCCCcC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCeEEEEehHHe
Confidence 3468999999998765 5999999999999999999999996 478999998764
No 139
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=5.5e-10 Score=90.85 Aligned_cols=54 Identities=24% Similarity=0.497 Sum_probs=47.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 69 (79)
T 1x69_A 16 LGITAVALYDYQAAGDD-------EISFDPDDIITNIEMIDDGWWRGVC---KGRYGLFPANYV 69 (79)
T ss_dssp CCCCEEESSCCCCSSSS-------BCCCCTTCEEEEEEECSSSEEEEEE---TTEEEEEETTSE
T ss_pred CCeEEEECccCCCCCCC-------CcCcCCCCEEEEeEecCCCeEEEEE---CCcEEEechHHE
Confidence 34579999999998764 5999999999999999999999996 579999998754
No 140
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.97 E-value=4.2e-10 Score=94.50 Aligned_cols=55 Identities=18% Similarity=0.440 Sum_probs=47.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||++..++ +|+|++||+|+|+++. +++||.|+. +|+.|+||+...+.
T Consensus 5 ~~~~~Alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 61 (93)
T 1uff_A 5 SSGYRALYPFEARNHD-------EMSFNSGDIIQVDEKTVGEPGWLYGSF---QGNFGWFPCNYVEK 61 (93)
T ss_dssp CCCEEESSCBCCCSSS-------CCCBCTTCEEEECSSCCCSSSEEEEEE---TTEEEEEETTTEEE
T ss_pred CEEEEECccCCCCCCC-------CcCCCCCCEEEEeEccCCCCCEEEEEE---CCCEEEechHHeEE
Confidence 4468999999998775 5999999999999986 789999996 47899999987644
No 141
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=98.97 E-value=6.7e-10 Score=92.55 Aligned_cols=59 Identities=20% Similarity=0.463 Sum_probs=49.6
Q ss_pred CCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee--cCCCceEEEEccCCCceeeecChhHHH
Q psy6613 44 KNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK--YDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 44 k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~--~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
.+...++||+|||.+..++ +|+|++||+|+|+++ .+.+||.|++. +++.|+||+.....
T Consensus 14 ~~~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 74 (91)
T 1wx6_A 14 SRVLHVVQTLYPFSSVTEE-------ELNFEKGETMEVIEKPENDPEWWKCKNA--RGQVGLVPKNYVVV 74 (91)
T ss_dssp CCCCEEEEESSCCCCSSSS-------BCCCCTTCEEEEEECCSSCTTEEEEECT--TCCEEEEEGGGEEE
T ss_pred CCccEEEEEeecCCcCCCC-------cccCCCCCEEEEEECCCCCCCcEEEEeC--CCCEEEEchHHEEE
Confidence 3456689999999998765 599999999999999 68899999863 47899999987643
No 142
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=98.97 E-value=6.1e-10 Score=89.21 Aligned_cols=54 Identities=20% Similarity=0.398 Sum_probs=46.4
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|.|+++ +++||.|+.. +++.|+||+....
T Consensus 7 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv~ 60 (72)
T 2jw4_A 7 EVVVVAKFDYVAQQEQ-------ELDIKKNERLWLLDD-SKSWWRVRNS--MNKTGFVPSNYVE 60 (72)
T ss_dssp CEEEECSSCCCCSSTT-------SCCCCTTCEEEEEEC-SSSSEEEECT--TSCEEEECTTSCE
T ss_pred CeEEEECcCCCcCCCC-------cccCCCCCEEEEEEC-CCCEEEEEEC--CCCEEEEEhhHEE
Confidence 4579999999998765 599999999999998 6799999975 4789999998653
No 143
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.97 E-value=6.8e-10 Score=90.22 Aligned_cols=56 Identities=21% Similarity=0.400 Sum_probs=48.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-CCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+..++ +|+|++||+|+|+++.+ ++||.+++. .++.|+||+....
T Consensus 12 ~~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~~--~g~~G~~P~~yv~ 68 (78)
T 2dl5_A 12 YPLTCKVVYSYKASQPD-------ELTIEEHEVLEVIEDGDMEDWVKARNK--VGQVGYVPEKYLQ 68 (78)
T ss_dssp SSEEEEECSCBCCCSTT-------BCCBCSSEEEEEEECCSSSSEEEEECT--TCCEEEEETTTSC
T ss_pred CCcEEEEceeECCCCCC-------CCCCCCCCEEEEEeccCCCCcEEEEeC--CCCEEEEEhHHEE
Confidence 45679999999998765 59999999999999975 899999984 3789999997653
No 144
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=98.96 E-value=8.1e-10 Score=87.42 Aligned_cols=54 Identities=17% Similarity=0.428 Sum_probs=46.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++||+|||.+..++ +|+|++||+|+|+++ +++||.++. .+++.|+||+....
T Consensus 7 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~--~~g~~G~~P~~yv~ 60 (68)
T 1wxt_A 7 GLKMQVLYEFEARNPR-------ELTVVQGEKLEVLDH-SKRWWLVKN--EAGRSGYIPSNILE 60 (68)
T ss_dssp CEEEEESSCBCCCSSS-------BCCBCTTCEEEEEEC-SSSEEEEEC--TTSCEEEEEGGGEE
T ss_pred CeEEEECceECCCCcC-------cCCCCCCCEEEEEEc-CCCEEEEEE--CCCCEEEEEhHHcE
Confidence 4579999999998765 699999999999999 489999996 25789999987653
No 145
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.96 E-value=7.6e-10 Score=87.79 Aligned_cols=53 Identities=21% Similarity=0.454 Sum_probs=46.1
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|+|+++. +++||.|+. +++.|+||+...
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~W~~g~~---~g~~G~~P~~yv 61 (70)
T 2da9_A 7 GDYCKVIFPYEAQNDD-------ELTIKEGDIVTLINKDCIDVGWWEGEL---NGRRGVFPDNFV 61 (70)
T ss_dssp SEEEEECSCCCCSSTT-------BCCCCTTEEEEEEECCCSSTTEEEEEC---SSCEEEEEGGGE
T ss_pred CcEEEECcCCCCCCcC-------EeeEcCCCEEEEEECCCCCCCeEEEEE---CCcEEEechHHe
Confidence 4578999999998765 6999999999999985 899999996 578999998764
No 146
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=98.96 E-value=5.3e-10 Score=85.89 Aligned_cols=53 Identities=30% Similarity=0.469 Sum_probs=44.7
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-CCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-SNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+||+|||.+..++ +|+|++||+|.|+++.+ ++||.++.. .++.|+||+...
T Consensus 4 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~g~~~--~g~~G~~P~~yv 57 (60)
T 2x3w_D 4 VRVRALYDYDGQEQD-------ELSFKAGDELTKLGEEDEQGWCRGRLD--SGQLGLYPANYV 57 (60)
T ss_dssp CEEEECSCBCCSSSS-------BCCBCTTCEEEECSCCCSSSEEEEECS--SCCEEEEEGGGE
T ss_pred CEEEECcccCccCCC-------cccCCCCCEEEEEEccCCCCceEEEeC--CCCEEEecHHHE
Confidence 468999999998764 69999999999999854 599999863 478999998754
No 147
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.96 E-value=7.4e-10 Score=90.51 Aligned_cols=54 Identities=22% Similarity=0.361 Sum_probs=46.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee--cCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK--YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~--~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+..++ +|+|++||+|+|+++ .+++||.|+. +++.|+||+...
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv 71 (81)
T 1x43_A 16 NNRKARVLYDYDAANST-------ELSLLADEVITVFSVVGMDSDWLMGER---GNQKGKVPITYL 71 (81)
T ss_dssp CCEEEEESSCCCCSSTT-------BCCCCTTCEEEEECCTTCCTTEEEEEE---TTEEEEEEGGGE
T ss_pred CCeEEEEcccCCCCCCC-------cCCCCCCCEEEEEEcCCCCCCcEEEEE---CCCEEEEehHHE
Confidence 45679999999998775 599999999999999 4689999986 578999998764
No 148
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=5.5e-10 Score=89.55 Aligned_cols=55 Identities=16% Similarity=0.337 Sum_probs=46.7
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+..++ +|+|++||+|+|+++. |++||.++. +++.|+||+....
T Consensus 6 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 62 (73)
T 2dm1_A 6 SGGTAVARYNFAARDMR-------ELSLREGDVVRIYSRIGGDQGWWKGET---NGRIGWFPSTYVE 62 (73)
T ss_dssp SSSEEEESSCBCCCSTT-------BCCBCTTCEEECCBSSSSSSSCEEEEE---TTEEEEECSSSEE
T ss_pred CCCEEEECccCCcCCCC-------cCCCCCCCEEEEEEecCCCCCeEEEEE---CCeEEEeehHHEE
Confidence 34579999999998764 5999999999999987 559999997 5799999997654
No 149
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=98.96 E-value=8e-10 Score=85.38 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=44.4
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+++|+|||.+..++ +|+|++||+|.|+++ .+++||.++. +++.|+||+...
T Consensus 6 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~~~~---~g~~G~~P~~yv 58 (63)
T 3eg3_A 6 NLFVALYDFVASGDN-------TLSITKGEKLRVLGYNHNGEWCEAQT---KNGQGWVPSAYI 58 (63)
T ss_dssp TEEEESSCBCCCSSS-------BCCBCTTCEEEEEEECTTSSEEEEEE---TTEEEEEEGGGE
T ss_pred EEEEEcceECCCCCC-------ccCCCCCCEEEEEEeCCCCCeEEEEE---CCCeEEEehHHe
Confidence 368999999998765 599999999999995 5677999998 468899998764
No 150
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=98.96 E-value=6.1e-10 Score=87.74 Aligned_cols=56 Identities=18% Similarity=0.330 Sum_probs=47.3
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+....++|+|||.+..++ +|+|++||+|.|+++.+++||.|++. +++.|+||+...
T Consensus 8 ~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv 63 (68)
T 1s1n_A 8 STGEEYIAVGDFTAQQVG-------DLTFKKGEILLVIEKKPDGWWIAKDA--KGNEGLVPRTYL 63 (68)
T ss_dssp -CCEEEEECSCBCCSSSS-------CCCBCSSEEEEECSCCSSSEEEEECS--SSCEEEEESTTE
T ss_pred CCCCEEEEcccCCCCCCC-------cCCCCCCCEEEEEEcCCCCeEEEEEC--CCCEEEEehHHe
Confidence 334568899999998765 59999999999999999999999963 478999998754
No 151
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.95 E-value=8.2e-10 Score=91.96 Aligned_cols=56 Identities=21% Similarity=0.434 Sum_probs=49.1
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..+.++|+|||.+..++ +|+|++||+|+|+++.+++||.+++ +++.|+||+....+
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~~P~~yv~~ 71 (88)
T 2cub_A 16 LNMPAYVKFNYMAERED-------ELSLIKGTKVIVMEKCSDGWWRGSY---NGQVGWFPSNYVTE 71 (88)
T ss_dssp CCEEEEESSCCCCCSTT-------BCCCCTTEEEEEEEECTTSEEEEEE---TTEEEEEEGGGEEE
T ss_pred CCCEEEEccccCCCCCC-------CcCCCCCCEEEEEEccCCCeEEEEE---CCcEEEEehHHEEE
Confidence 35679999999998765 5999999999999999999999998 57899999987643
No 152
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.95 E-value=7.3e-10 Score=89.05 Aligned_cols=54 Identities=19% Similarity=0.540 Sum_probs=46.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+..++ +|+|++||+|+|+++ +++||.|++ +++.|+||+....
T Consensus 9 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~---~g~~G~~P~~yv~ 62 (74)
T 1j3t_A 9 ENLKAQALCSWTAKKDN-------HLNFSKHDIITVLEQ-QENWWFGEV---HGGRGWFPKSYVK 62 (74)
T ss_dssp CCCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEE-CSSEEEEES---TTCCCEEEGGGEE
T ss_pred CCeEEEECCCCCCCCCC-------ccCCCCCCEEEEEec-CCCEEEEEE---CCcEEEEchHHeE
Confidence 45689999999998765 599999999999999 478999996 4789999987653
No 153
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=98.95 E-value=5.1e-10 Score=90.08 Aligned_cols=53 Identities=25% Similarity=0.527 Sum_probs=45.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+||+|||.+..++ +|+|++||+|.|+++. |.+||.|+. +++.|+||+...
T Consensus 9 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~Ww~g~~---~g~~G~~P~~yv 62 (74)
T 1gbq_A 9 SMEAIAKYDFKATADD-------ELSFKRGDILKVLNEECDQNWYKAEL---NGKDGFIPKNYI 62 (74)
T ss_dssp -CEEEESSCBCCSSTT-------BCCBCTTCEEECCBCSSCSSEEEEEE---TTEEEEEEGGGE
T ss_pred CeEEEECccCCCCCCC-------eeeEcCCCEEEEeEecCCCCEEEEEE---CCCEEEEehHhE
Confidence 4579999999998765 5999999999999987 679999996 578999999864
No 154
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.95 E-value=9.5e-10 Score=88.80 Aligned_cols=56 Identities=14% Similarity=0.288 Sum_probs=47.6
Q ss_pred CeeEEEEeeccCCC-CCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGS-IDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~-~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
+..++||+|||.+. .++ +|+|++||+|+|+++. +++||.|++. +++.|+||+....
T Consensus 8 ~~~~~~al~dy~~~~~~~-------eLs~~~Gd~i~v~~~~~~~gW~~g~~~--~g~~G~~P~~yv~ 65 (77)
T 2enm_A 8 MATKARVMYDFAAEPGNN-------ELTVTEGEIITVTNPNVGGGWLEGKNN--KGEQGLVPTDYVE 65 (77)
T ss_dssp SCEEEEESSCCCCCTTSS-------BCCCCTTCEEEEEESCCSSSEEEEECT--TCCEEEEETTTEE
T ss_pred CCcEEEECccCCCCCCCC-------eecCCCCCEEEEeEccCCCCeEEEEEC--CCCEEEeehHHeE
Confidence 45789999999998 543 6999999999999985 8999999964 4789999987653
No 155
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=98.95 E-value=8.2e-10 Score=91.39 Aligned_cols=57 Identities=25% Similarity=0.356 Sum_probs=48.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..+++|+|||.+..++ +|+|.+||+|.|+++.+++||.|++.. +|+.|+||++...+
T Consensus 6 ~~~~~Alydy~a~~~~-------eLsf~~Gd~i~vl~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 62 (84)
T 4ag1_C 6 VTLFVALYDYNATRWT-------DLSFHKGEKFQILEFGPGDWWEARSLT-TGETGYIPSNYVAP 62 (84)
T ss_dssp CCEEEESSCBCCSBTT-------BCCBCTTCEEEEEECCSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CEEEEEcccCCCCCCC-------cccccCCCEEEEEEecCCCeEEEEECC-CCCEEEEehHHeEE
Confidence 3478999999998764 599999999999999999999999863 46899999887643
No 156
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=98.94 E-value=3.6e-10 Score=95.55 Aligned_cols=58 Identities=17% Similarity=0.420 Sum_probs=49.8
Q ss_pred cCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 43 AKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 43 ~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+....++||+|||.+..++ +|+|++||+|.|+++.+++||.|++ +|+.|+||+....
T Consensus 14 ~~~~~~~~~Alydy~a~~~~-------eLsf~~Gd~i~V~~~~~~gWw~g~~---~g~~G~fPsnyV~ 71 (92)
T 2o2o_A 14 GERRRRRCQVAFSYLPQNDD-------ELELKVGDIIEVVGEVEEGWWEGVL---NGKTGMFPSNFIK 71 (92)
T ss_dssp SSCSSCEEEECSCBCCCSSS-------CCCBCSSCEEECCCGGGSSCBCCEE---TTEECCBCSSSEE
T ss_pred CCCCCeEEEEccccCCCCCc-------cccccCCCEEEEeEecCCCEEEEEE---CCeEEEeehHHEE
Confidence 44455689999999998765 5999999999999999999999997 5799999997653
No 157
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=1.1e-09 Score=89.03 Aligned_cols=54 Identities=20% Similarity=0.488 Sum_probs=47.4
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|+|+++.+++||.++. +++.|+||+....
T Consensus 7 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 60 (79)
T 2yun_A 7 GRLCKALYSFQARQDD-------ELNLEKGDIVIIHEKKEEGWWFGSL---NGKKGHFPAAYVE 60 (79)
T ss_dssp SEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSCEEEES---SSCEEEECSTTEE
T ss_pred CCEEEECccCCcCCCC-------CcCCCCCCEEEEEEcCCCCEEEEEE---CCCEEEEEhHHeE
Confidence 4579999999998765 5999999999999999999999995 5789999998764
No 158
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.94 E-value=4.7e-10 Score=89.16 Aligned_cols=53 Identities=23% Similarity=0.441 Sum_probs=45.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+..++ +|+|++||+|+|+++ |++||.|+. +++.|+||+...
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~---~g~~G~~P~~yv 59 (69)
T 1uhf_A 7 GGEEYIALYPYSSVEPG-------DLTFTEGEEILVTQK-DGEWWTGSI---GDRSGIFPSNYV 59 (69)
T ss_dssp CSEEEECSSCBCCSSSS-------BCCBCTTCEEEECEE-ETTEEEECS---TTCCEEECGGGC
T ss_pred CCCEEEEeeeECCCCcC-------ccCCCCCCEEEEEEe-CCCEEEEEe---CCcEEEEchHHe
Confidence 34568999999998765 599999999999999 889999985 578999999765
No 159
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=98.94 E-value=8.2e-10 Score=87.49 Aligned_cols=54 Identities=17% Similarity=0.338 Sum_probs=46.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|.|+++. ++||.++.. +++.|+||++...
T Consensus 8 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~~~~~--~g~~G~~P~~yv~ 61 (68)
T 2k2m_A 8 LKWVLCNYDFQARNSS-------ELSVKQRDVLEVLDDS-RKWWKVRDP--AGQEGYVPYNILT 61 (68)
T ss_dssp CCEEEESSCBCCCSSS-------BCCBCTTCEEEEEECS-SSEEEEECT--TSCCEEEEGGGEE
T ss_pred CEEEEECccCCCCCCC-------cccCCCCCEEEEEEcC-CCeEEEEeC--CCCEEEEEhhhEE
Confidence 4579999999998765 5999999999999985 899999874 4789999998653
No 160
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=98.94 E-value=7.2e-10 Score=88.39 Aligned_cols=55 Identities=18% Similarity=0.249 Sum_probs=46.1
Q ss_pred eeEEEEeeccCC-CCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDG-SIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~-~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+ ..++ +|+|++||+|+|+++ .+++||.|++.+ .+..|+||+...
T Consensus 7 ~~~~~al~dy~a~~~~~-------eLs~~~Gd~i~v~~~~~~~gWw~g~~~~-~g~~G~fP~~yv 63 (72)
T 1spk_A 7 GQKVKTIFPHTAGNNKT-------LLSFAQGDVLTLLIPEEKDGWLYGEHDT-TKARGWFPSSYT 63 (72)
T ss_dssp SCEEECSSCBCCSSCSS-------BCCBCTTCEEEECCSSCBTTEEEEEETT-TCCEEEEEGGGC
T ss_pred ceEEEEeeeeCCCCCCC-------CCcCCCCCEEEEeEccCCCCcEEEEECC-CCCEEEEehHHe
Confidence 457999999995 5543 699999999999998 889999999853 368999998764
No 161
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.94 E-value=8.5e-10 Score=92.69 Aligned_cols=54 Identities=19% Similarity=0.433 Sum_probs=46.7
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-----CCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-----DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-----d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..++||+|||.+..++ +|+|++||+|.|+++. +++||.|++. +|+.|+||+...
T Consensus 29 ~~~~~Alydy~a~~~~-------ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~--~g~~G~fP~nyV 87 (89)
T 2rf0_A 29 GPVWTAVFDYEAAGDE-------ELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP--SGRVGVFPSNYV 87 (89)
T ss_dssp CCEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCHHHHSSTTEEEEECT--TCCEEEEEGGGE
T ss_pred CcEEEECCccCCCCCC-------ccccCCCCEEEEEeccCCcccCCCEEEEEEC--CCCEEEEcHHHC
Confidence 4478999999998775 5999999999999995 8999999985 478999998753
No 162
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=86.53 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=47.0
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC-CceEEEEccCCCceeeecChhHH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS-NWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~-~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
|...++||+|||.+..++ +|+|++||+|.|++..+. +||.+++. .++.|+||+...+
T Consensus 5 p~~~~~~alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~gW~~~~~~--~g~~G~~P~~yv~ 62 (70)
T 2ct4_A 5 SSGGHCVAIYHFEGSSEG-------TISMAEGEDLSLMEEDKGDGWTRVRRK--EGGEGYVPTSYLR 62 (70)
T ss_dssp CSSCEEEESSCBCCCSTT-------CCCBCTTCEEEEEECCSSSCEEEEECS--SSCEEEEEGGGEE
T ss_pred CcCCEEEEcccCCCCCCC-------cCCCCCCCEEEEEeccCCCCeEEEEeC--CCCEEEEEhHHeE
Confidence 344579999999998765 599999999999998764 59999974 4789999998653
No 163
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=98.93 E-value=7.5e-10 Score=87.55 Aligned_cols=55 Identities=16% Similarity=0.260 Sum_probs=47.2
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|+|+++.+++||.|++.. +++.|+||+...
T Consensus 7 ~~~~~al~~y~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv 61 (70)
T 2cuc_A 7 GNMFVALHTYSAHRPE-------ELDLQKGEGIRVLGKYQDGWLKGLSLL-TGRTGIFPSDYV 61 (70)
T ss_dssp SCCEECCSCBCCCSTT-------BCCBCTTCEEEEEEEEETTEEEEEETT-TCCEEEEEGGGC
T ss_pred CcEEEECeeECcCCCC-------cCCCCCCCEEEEEEecCCCeEEEEECC-CCCEEEEchHHe
Confidence 3468999999998765 599999999999999999999999653 468999998764
No 164
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.93 E-value=6.5e-10 Score=90.43 Aligned_cols=54 Identities=19% Similarity=0.381 Sum_probs=46.2
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC----CCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD----SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d----~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++||+|||.+..++ +|+|++||+|+|+++.| ++||.++. +++.|+||+....
T Consensus 13 ~~~~~Alydy~~~~~~-------eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 70 (79)
T 1uhc_A 13 NQVYFAVYTFKARNPN-------ELSVSANQKLKILEFKDVTGNTEWWLAEV---NGKKGYVPSNYIR 70 (79)
T ss_dssp SCCEEESSCBCCCSSS-------BCCBCTTCEEEEEESCCTTSCTTEEEEES---SSCEEEEEGGGEE
T ss_pred CeEEEECccCCCCCCC-------ccCCCCCCEEEEEECCCCCCCCCeEEEEe---CCCEEEEchHHeE
Confidence 3468999999998765 59999999999999876 89999984 5789999998653
No 165
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=98.93 E-value=4.8e-10 Score=89.90 Aligned_cols=51 Identities=16% Similarity=0.384 Sum_probs=44.0
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+||+|||.+ .++ +|+|++||+|.|+++.+++||.|+. +|+.|+||++...
T Consensus 2 ~a~alydy~~-~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 52 (73)
T 2kxd_A 2 GAPPLPPYSA-GGR-------EVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVK 52 (73)
T ss_dssp CCCCCCSSCC-CSC-------CCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEeeeeCC-CCC-------EeeEcCCCEEEEEEecCCCEEEEEE---CCCEEEEehHHeE
Confidence 3689999997 433 5999999999999999999999985 5789999998764
No 166
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.93 E-value=8e-10 Score=87.78 Aligned_cols=55 Identities=18% Similarity=0.295 Sum_probs=47.7
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..-.++|+|||.+..++ +|+|++||+|.|+++.+++||.+++. ++.|+||+....
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~---g~~G~~P~~yv~ 61 (71)
T 2dnu_A 7 GEEKYVTVQPYTSQSKD-------EIGFEKGVTVEVIRKNLEGWWYIRYL---GKEGWAPASYLK 61 (71)
T ss_dssp CSEEEECSSCBCCSSTT-------BCCBCTTCEEEECCCCSSSEEEEEET---TEEEEEEGGGCE
T ss_pred CCCEEEECCccCCCCCC-------CCcCCCCCEEEEeECCCCCeEEEEEC---CcEEEEEHHHeE
Confidence 34568999999998765 59999999999999999999999984 789999988754
No 167
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=89.44 Aligned_cols=56 Identities=13% Similarity=0.212 Sum_probs=47.0
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC-CceEEEEccCCCceeeecChhHHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS-NWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~-~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++|+|||.+..++ +|+|++||+|+|+++.++ +||.|++.. .++.|+||++..++
T Consensus 18 ~~~~Alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 74 (81)
T 1x6g_A 18 TQCITKCEHTRPKPG-------ELAFRKGDVVTILEACENKSWYRVKHHT-SGQEGLLAAGALRE 74 (81)
T ss_dssp CEEEESSCBSSCCTT-------CCCBCTTCEEEEEECCCSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CEEEECCCCCcCCCC-------CCCCCCCCEEEEEeccCCCCeEEEEeCC-CCCEEEEehHHEEE
Confidence 468899999998775 499999999999998766 999999742 46899999987643
No 168
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.93 E-value=6e-10 Score=92.93 Aligned_cols=57 Identities=19% Similarity=0.383 Sum_probs=48.5
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
...++|+|||.+..++ +|+|++||+|+|+++.+++||.|++.. .++.|+||+.....
T Consensus 17 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~fP~~yv~~ 73 (90)
T 2yup_A 17 YGEAVAQYTFKGDLEV-------ELSFRKGEHICLIRKVNENWYEGRITG-TGRQGIFPASYVQV 73 (90)
T ss_dssp SEEEEECSCCCCCSSS-------BCCCCTTCEEEESSCCCSSEEEEECTT-TCCEEEEEGGGEEE
T ss_pred ceEEEEeecCCcCCcC-------cCCCCCCCEEEEEEEcCCCeEEEEECC-CCCEEEEehHHeEE
Confidence 4568999999998765 599999999999999999999999853 26899999987643
No 169
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=98.93 E-value=8e-10 Score=89.72 Aligned_cols=56 Identities=20% Similarity=0.334 Sum_probs=47.4
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC-----CceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS-----NWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~-----~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...+++|+|||.+..++ .+|+|++||+|+|+++.+. +||.|++. +|+.|+||+...
T Consensus 13 ~~~~~~alydy~~~~~~------~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~--~g~~G~~P~~yv 73 (80)
T 2v1r_A 13 KLEFARALYDFVPENPE------MEVALKKGDLMAILSKKDPLGRDSDWWKVRTK--NGNIGYIPYNYI 73 (80)
T ss_dssp GCEEEEESSCBCCSSTT------TBCCBCTTCEEEEEEEECTTSCEEEEEEEECT--TSCEEEEEGGGE
T ss_pred cCEEEEECccCCCCCCC------CEecCCCCCEEEEEECCCCCCCCCCcEEEEeC--CCCeEEEEHHHe
Confidence 34679999999998764 1599999999999999876 99999973 578999999764
No 170
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=98.92 E-value=4.5e-10 Score=93.14 Aligned_cols=54 Identities=20% Similarity=0.416 Sum_probs=46.4
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|.|+++ +++||.|+.. +|+.|+||+....
T Consensus 31 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~--~g~~G~~P~~yv~ 84 (86)
T 2jxb_A 31 EVIVIAKWDYTAQQDQ-------ELDIKKNERLWLLDD-SKTWWRVRNA--ANRTGYVPSNYVE 84 (86)
T ss_dssp CEEEEESSCCCCCSSS-------BCCCCTTEEEEEEEC-CSSEEEEECT--TSCEEEEEGGGBC
T ss_pred ceEEEECccCCCCCCC-------EeccCCCCEEEEEec-CCCeEEEEEC--CCCEEEeehHHEE
Confidence 3579999999998765 599999999999998 6799999964 4789999998653
No 171
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=98.92 E-value=3e-10 Score=89.65 Aligned_cols=52 Identities=19% Similarity=0.486 Sum_probs=45.7
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++||+|||.+..++ +|+|++||+|+|+++.+++||.|+. +++.|+||+...
T Consensus 8 ~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 59 (68)
T 1wi7_A 8 RRCQVAFSYLPQNDD-------ELELKVGDIIEVVGEVEEGWWEGVL---NGKTGMFPSNFI 59 (68)
T ss_dssp CCEEESSCBCCSSTT-------BCCBCTTCEECCCEEEETTEEEECS---TTCCEEEETTSE
T ss_pred CEEEECccCCcCCCC-------CccCcCCCEEEEEEcCCCCeEEEEE---CCcEEEEchHHE
Confidence 468999999998765 6999999999999998999999985 578999998754
No 172
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=98.92 E-value=3.4e-10 Score=89.08 Aligned_cols=56 Identities=20% Similarity=0.243 Sum_probs=47.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ +|+|++||+|.|+++.+++||.++.. +++.|+||+....
T Consensus 7 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~ 62 (67)
T 1aww_A 7 ELKKVVALYDYMPMNAN-------DLQLRKGDEYFILEESNLPWWRARDK--NGQEGYIPSNYVT 62 (67)
T ss_dssp CCCEEEBSSCCCCSSSS-------SCCCCSSCEEECCCCCSSSEECCBCT--TSCBCCEETTTBC
T ss_pred CCeEEEECccCCCCCCC-------CccCCCCCEEEEEEccCCCcEEEEEC--CCCEEEEchHhEE
Confidence 34578999999998765 59999999999999999999999864 4789999998653
No 173
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A
Probab=98.91 E-value=1.3e-09 Score=90.96 Aligned_cols=57 Identities=19% Similarity=0.328 Sum_probs=48.2
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC-----CceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS-----NWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~-----~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ .+|+|++||+|.|+++.+. +||.|++ .+|+.|+||+....
T Consensus 13 ~~~~~~alydy~~~~~~------~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~--~~g~~G~~P~~yv~ 74 (92)
T 1jqq_A 13 KLEFARALYDFVPENPE------MEVALKKGDLMAILSKKDPLGRDSDWWKVRT--KNGNIGYIPYNYIE 74 (92)
T ss_dssp TCEEEEESSBBCCSSTT------TBCCBCTTCEEEEEEEECTTSCEEEEEEEEE--TTSCEEEEEGGGEE
T ss_pred cCEEEEECccCCCCCCC------CCcCCCCCCEEEEEECCCCCCCCCCCeEEEe--CCCCEEEEehHHeE
Confidence 45679999999998764 1599999999999999876 9999998 35789999998754
No 174
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1.5e-09 Score=88.44 Aligned_cols=55 Identities=15% Similarity=0.344 Sum_probs=47.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+..++ +|+|++||+|+|+++ +++||.|++.. +++.|+||+...
T Consensus 16 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~-~~gW~~g~~~~-~g~~G~fP~~yv 70 (79)
T 1x6b_A 16 DLPQVEITKAFFAKQAD-------EVTLQQADVVLVLQQ-EDGWLYGERLR-DGETGWFPEDFA 70 (79)
T ss_dssp SCCEEEESSCCCCCSSS-------BCCCCTTEEEEEEEE-ETTEEEEEETT-TCCEEEECGGGC
T ss_pred CCCEEEECeeECCCCcC-------CcCCCCCCEEEEEEe-CCCEEEEEECC-CCCEEEEchHHE
Confidence 34579999999998764 599999999999999 99999999853 468999998764
No 175
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=8.2e-10 Score=87.59 Aligned_cols=54 Identities=20% Similarity=0.380 Sum_probs=46.7
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.-.+||+|||.+..++ +|+|++||+|+|+++.+++||.+++ .++.|+||+....
T Consensus 8 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 61 (70)
T 2ega_A 8 LEQYVVVSNYKKQENS-------ELSLQAGEVVDVIEKNESGWWFVST---SEEQGWVPATYLE 61 (70)
T ss_dssp CBCEECCSCCCCCSSS-------SCCCCTTCBCEEEEECTTSEEEEEC---SSCEEEEEGGGCE
T ss_pred CcEEEECceECCCCCC-------cccCCCCCEEEEEEccCCCeEEEEE---CCCEEEEehHHcE
Confidence 4458999999998765 5999999999999999999999986 4689999987653
No 176
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=98.90 E-value=1.4e-09 Score=95.92 Aligned_cols=55 Identities=22% Similarity=0.375 Sum_probs=47.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||++..++ +|+|++||+|+|+++. ++||.|++..++|+.|+||+...
T Consensus 59 ~~~~~Alydy~a~~~~-------eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV 113 (119)
T 2rqr_A 59 ERHGVAIYNFQGSGAP-------QLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFI 113 (119)
T ss_dssp CEEEEBCSCBCCCSTT-------BCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGB
T ss_pred ceEEEEccccCCCCCC-------cccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHE
Confidence 4679999999998775 5999999999999986 59999999764679999999764
No 177
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=98.90 E-value=1.9e-09 Score=92.33 Aligned_cols=57 Identities=21% Similarity=0.461 Sum_probs=49.2
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +|+|++||+|+|+++.+++||.|++.. +++.|+||+....+
T Consensus 27 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~~~-~g~~G~~P~~yv~~ 83 (109)
T 2yt6_A 27 VTIFVALYDYEARTTE-------DLSFKKGERFQIINNTEGDWWEARSIA-TGKSGYIPSNYVVP 83 (109)
T ss_dssp CCEEEESSCCCCSSTT-------SCCCCTTCEEEEEECSCTTCEEEEESS-SCCEEEECTTTEEE
T ss_pred CEEEEECccCCCCCCC-------ccCCCCCCEEEEEEccCCCcEEEEECC-CCCEEEechHHcEE
Confidence 4679999999998765 599999999999999999999999853 46899999987643
No 178
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=98.90 E-value=1.7e-09 Score=94.19 Aligned_cols=58 Identities=14% Similarity=0.201 Sum_probs=47.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-c--CCCceEEEEccC-----CCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-Y--DSNWWIGRLVKE-----GSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~--d~~WWqar~v~~-----~~~~GlIPS~~~~E 111 (510)
...++|+|||.+..++ +|+|++||+|.|+++ . +++||.|+..++ .|+.|+||++...+
T Consensus 22 ~~~~~Alydy~a~~~~-------ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~ 87 (108)
T 1i1j_A 22 ISMAVALQDYMAPDCR-------FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRE 87 (108)
T ss_dssp SEEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEE
T ss_pred eeEEEECCccCCCCCC-------ccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEE
Confidence 4569999999999765 699999999999998 2 335999998532 26899999987643
No 179
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=98.89 E-value=6.9e-11 Score=95.78 Aligned_cols=55 Identities=15% Similarity=0.268 Sum_probs=47.5
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. .+|+.|+||++...
T Consensus 20 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~~~~--~~g~~G~~P~~yv~ 74 (77)
T 1awj_A 20 ETLVIALYDYQTNDPQ-------ELALRCDEEYYLLDSSEIHWWRVQD--KNGHEGYAPSSYLV 74 (77)
T ss_dssp SSCCCCCCCBCCCCTT-------SCCBCSSSCCSCCCTTSSSBCCCCC--SSSCCCCCBSTTCC
T ss_pred ceEEEECccCCCCCcC-------CcCCCCCCEEEEEEecCCCCEEEEE--CCCCEEEEehHHEE
Confidence 3568999999998775 5999999999999999999999986 35789999998654
No 180
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=98.88 E-value=2e-09 Score=89.47 Aligned_cols=55 Identities=24% Similarity=0.414 Sum_probs=46.6
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
.+++|+|||.+..++ +|+|++||+|.|++. +++||.|+... +|+.|+||+....+
T Consensus 4 ~~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~g~~~~-~g~~G~~P~~yv~~ 58 (90)
T 3reb_B 4 IIVVALYDYVSWSPD-------DLSFQKGDQMVVLEE-SGEWWKARSLA-TRKEGYIPSNYVAR 58 (90)
T ss_dssp CEEEESSCBCCSSTT-------BCCBCTTCEEEEEEC-SSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred EEEEECCccCcCCcC-------cCCCCCCCEEEEEEe-CCCEEEEEECC-CCCEEEEehhheEE
Confidence 468999999998765 599999999999998 57899999854 46899999887643
No 181
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=1.2e-09 Score=86.49 Aligned_cols=54 Identities=19% Similarity=0.330 Sum_probs=45.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++||+|||.+..++ +|+|++||+|+|+++. ++||.++.. +++.|+||+....
T Consensus 7 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~~~~~--~g~~G~~P~~yv~ 60 (68)
T 1wxb_A 7 GKYVKILYDFTARNAN-------ELSVLKDEVLEVLEDG-RQWWKLRSR--SGQAGYVPCNILG 60 (68)
T ss_dssp CCCEECSSCBCCSSSS-------BCCBCTTCEEEEEECS-SSEEEEECT--TSCEEEEETTTCC
T ss_pred CEEEEECccCCCCCCC-------ccCCCCCCEEEEEEcC-CCEEEEEEC--CCCEEEEEHHHeE
Confidence 3468999999998765 6999999999999984 899999973 4789999997653
No 182
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=98.88 E-value=2.9e-09 Score=87.50 Aligned_cols=54 Identities=22% Similarity=0.446 Sum_probs=46.7
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
..+++|+|||.+..++ +|+|++||+|.|+++. ++||.|++.. +++.|+||+...
T Consensus 25 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~-~~Ww~g~~~~-~g~~G~~P~~yv 78 (86)
T 2oi3_A 25 DIIVVALYDYEAIHHE-------DLSFQKGDQMVVLEES-GEWWKARSLA-TRKEGYIPSNYV 78 (86)
T ss_dssp SEEEEESSCCCCSSSS-------CCCCCTTCEEEEEEES-SSEEEEEETT-TCCEEEEEGGGE
T ss_pred CcEEEECccCCCCCCC-------cCcCCCCCEEEEEEcC-CCeEEEEECC-CCCEEEEehHHc
Confidence 4579999999998765 5999999999999998 5999999864 468999998764
No 183
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=98.86 E-value=9.5e-10 Score=96.60 Aligned_cols=57 Identities=16% Similarity=0.352 Sum_probs=48.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEe-----ecCCCceEEEEccC-------CCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKE-----KYDSNWWIGRLVKE-------GSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~-----~~d~~WWqar~v~~-------~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|.|++ ..+++||.|++.++ +++.|+||+...
T Consensus 43 ~~~~~~Alydy~a~~~d-------ELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV 111 (115)
T 1bb9_A 43 FMFKVQAQHDYTATDTD-------ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFT 111 (115)
T ss_dssp CCEEEEESSCBCCSSTT-------BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGE
T ss_pred cceEEEECCccCCCCCC-------ccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHE
Confidence 45679999999998775 59999999999999 78899999998632 257999998754
No 184
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.86 E-value=1e-09 Score=92.83 Aligned_cols=56 Identities=23% Similarity=0.500 Sum_probs=48.3
Q ss_pred CCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 44 KNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 44 k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+...+++|+|||.+..++ +|+|++||+|+|+++.+++||.++. +++.|+||+...
T Consensus 31 ~~~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv 86 (98)
T 1udl_A 31 FHPVCQVIAMYDYAANNED-------ELSFSKGQLINVMNKDDPDWWQGEI---NGVTGLFPSNYV 86 (98)
T ss_dssp CCCSEEEEESSCCCCSSTT-------SCCCCTTCEEEECBCCSSSEEBCBS---SSCBCCEETTSE
T ss_pred CCCceEEEECCCCCCCCCC-------ccCCcCCCEEEEEEecCCCEEEEEE---CCcEEEEehHHe
Confidence 3446789999999998765 5999999999999999999999984 578999998765
No 185
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=98.85 E-value=1.9e-09 Score=99.62 Aligned_cols=58 Identities=24% Similarity=0.449 Sum_probs=50.0
Q ss_pred cCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 43 AKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 43 ~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+|...+++|+|||.+..++ +|+|++||+|.|+++.|++||+|+.. +|+.|+||++..
T Consensus 114 ~~p~~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~nyv 171 (174)
T 3qwx_X 114 KKPIIEVVVGTFKFTGERET-------DLPFEQGERLEILSKTNQDWWEARNA--LGTTGLVPANYV 171 (174)
T ss_dssp CCCCSEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEECT--TCCEEEEEGGGE
T ss_pred ccccccEEEEecCcccCCCC-------ccccccCCEEEEEEccCCCeEEEEEC--CCCEEEEChHHE
Confidence 45566789999999999765 69999999999999999999999962 578999999764
No 186
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=98.82 E-value=3.6e-09 Score=85.71 Aligned_cols=60 Identities=15% Similarity=0.291 Sum_probs=45.6
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+...+++|+|+|.+.... + +.+|+|++||+|+|+++. +++||.|++.. +|+.|+||++..
T Consensus 13 p~~~~~~a~~~~~~~~~~---~-~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~-~g~~G~fP~nyV 73 (78)
T 1k1z_A 13 PKMEVFQEYYGIPPPPGA---F-GGFLRLNPGDIVELTKAEAEHNWWEGRNTA-TNEVGWFPCNRV 73 (78)
T ss_dssp CCEEECSCBSSCSCCSSS---S-CCCCCBCTTCEEEEEECCSSCSCEEEEETT-TTEEEEECSTTE
T ss_pred ccEEEEEECCCCCCCCCC---C-CCccCCCCCCEEEEEEcCCCCCeEEEEECC-CCCEEEEehHHe
Confidence 445567777777775311 0 246999999999999995 89999999753 478999999764
No 187
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.81 E-value=4.6e-09 Score=88.10 Aligned_cols=56 Identities=14% Similarity=0.271 Sum_probs=47.2
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee--cC--CCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK--YD--SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~--~d--~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++||+|||.+..++ +|+|++||+|+|+++ .+ ++||.|++.. +++.|+||+....
T Consensus 16 ~~~~~Alydy~~~~~~-------eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~-~g~~G~fP~~yv~ 75 (94)
T 2e5k_A 16 HETLQVIYPYTPQNDD-------ELELVPGDFIFMSPMEQTSTSEGWIYGTSLT-TGCSGLLPENYIT 75 (94)
T ss_dssp CEEEEECSCBCCSSSS-------BCCBCTTCEEEECGGGCCSTTTTEEEEEESS-SCCEEEEEGGGEE
T ss_pred CeEEEECCcCCCCCCC-------CcCCCCCCEEEEEECcCCCCCCCcEEEEECC-CCCEEEechHHeE
Confidence 4579999999998765 599999999999998 45 8999999643 4789999998754
No 188
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=98.79 E-value=2.8e-09 Score=87.40 Aligned_cols=55 Identities=15% Similarity=0.324 Sum_probs=45.4
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee---------------cCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK---------------YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~---------------~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.+.+||+|||.+..++ +|+|++||+|.|+++ .+++||.|++.. +|+.|+||+...
T Consensus 5 ~~~~~Alydy~~~~~~-------eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~-~g~~G~fP~~yV 74 (83)
T 3i5r_A 5 GYQYRALYDYKKEREE-------DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNET-TGERGDFPGTYV 74 (83)
T ss_dssp EEEEEECSCBCCCSTT-------BCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETT-TTEEEEEEGGGE
T ss_pred CcEEEEccccCCCCCC-------ccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCC-CCCEEEEehHHE
Confidence 5679999999998765 599999999999964 345899999853 378999998764
No 189
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=98.79 E-value=2.7e-09 Score=89.43 Aligned_cols=56 Identities=21% Similarity=0.414 Sum_probs=46.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC----CCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD----SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d----~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++||+|||.+..++ +|+|++||+|+|+++.+ .+||.|+.. +++.|+||+....
T Consensus 16 ~~~~~~alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~--~~~~G~~P~~yv~ 75 (93)
T 1wxu_A 16 DHVVARAEYDFVAVSDE-------EISFRAGDMLNLALKEQQPKVRGWLLASLD--GQTTGLIPANYVK 75 (93)
T ss_dssp CBBCEEESSCBCCSSSS-------BCCBCSSCBCEECCTTTSCSCSSCEEEESS--SSSCEEECSTTEE
T ss_pred CCEEEEECccCCCCCCC-------ccCcCCCCEEEEEECCCCCCCCCcEEEEeC--CcCEEEEehHHEE
Confidence 35679999999998775 59999999999999987 699999752 3359999998764
No 190
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.79 E-value=2.9e-09 Score=103.16 Aligned_cols=57 Identities=16% Similarity=0.352 Sum_probs=48.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEe-----ecCCCceEEEEccC-------CCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKE-----KYDSNWWIGRLVKE-------GSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~-----~~d~~WWqar~v~~-------~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|++ ..+++||.|++..+ +|+.||||+...
T Consensus 141 ~~~~~rALYdY~a~~~d-------ELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYV 209 (213)
T 1mv3_A 141 FMFKVQAQHDYTATDTD-------ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFT 209 (213)
T ss_dssp CCEEEEESSCBCCCSTT-------CCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTE
T ss_pred cceEEEECCCcCCCCCC-------cCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHe
Confidence 34679999999999876 59999999999999 78899999998532 368999999764
No 191
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=98.78 E-value=6.1e-09 Score=94.55 Aligned_cols=55 Identities=18% Similarity=0.349 Sum_probs=47.5
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +|+|++||+|.|+++ .+++||.|+. +|+.|+||+.....
T Consensus 5 ~~~~~Alydy~a~~~~-------ELsf~~Gd~i~Vl~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 60 (142)
T 2kbt_A 5 FGTAKARYDFCARDRS-------ELSLKEGDIIKILNKKGQQGWWRGEI---YGRIGWFPSNYVEE 60 (142)
T ss_dssp CCEEEESSCCCCSSSS-------BCCCCTTCEEEEEECCCSSSEEEEEE---TTEEEEEETTSEEE
T ss_pred CeEEEECCccCCCCCC-------cCCCCCCCEEEEEEecCCCCeEEEEE---CCeeEEechHHEEE
Confidence 3478999999998765 599999999999998 4899999997 57899999987643
No 192
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=98.77 E-value=4.4e-10 Score=89.57 Aligned_cols=54 Identities=24% Similarity=0.479 Sum_probs=45.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCcee-eecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECG-FIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~G-lIPS~~~~ 110 (510)
..+++|+|||.+..++ +|+|++||+|.|+++.+++||.|++ ++..| +||+....
T Consensus 6 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~gG~~P~~yv~ 60 (71)
T 1hsq_A 6 KCAVKALFDYKAQRED-------ELTFIKSAIIQNVEKQEGGWWRGDY---GGKKQLWFPSNYVE 60 (71)
T ss_dssp SSCCCCSSCCCCSSSS-------SCCCCTTCCCBSCCCBTTTEECCBC---SSSCSCCEETTTCC
T ss_pred CeEEEECCCCCcCCCC-------ccCCCCCCEEEEEEecCCCEEEEEE---CCeEEeEEChHHcE
Confidence 3468999999998775 5999999999999999999999987 34554 99998654
No 193
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*
Probab=98.74 E-value=9e-09 Score=95.19 Aligned_cols=56 Identities=27% Similarity=0.443 Sum_probs=47.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..+++|+|||.+..++ +|+|++||+|+|++. |++||+|+... +|+.|+||++...+
T Consensus 12 ~~~~~alydy~~~~~~-------eLs~~~Gd~i~v~~~-~~~Ww~~~~~~-~g~~G~vP~~yv~~ 67 (175)
T 4d8k_A 12 DNLVIALHSYEPSHDG-------DLGFEKGEQLRILEQ-SGEWWKAQSLT-TGQEGFIPFNFVAK 67 (175)
T ss_dssp -CEEEESSCBCCCSSS-------BCCBCTTCEEEEEEC-CSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred CcEEEEccCcCCcCCc-------ccccccCCEEEEEcc-CCCEEEEEECC-CCceeeeccccccc
Confidence 3479999999998875 599999999999999 78999999864 46899999987654
No 194
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=98.71 E-value=1.2e-08 Score=85.34 Aligned_cols=56 Identities=13% Similarity=0.179 Sum_probs=45.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee---------------cCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK---------------YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~---------------~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
....+||+|||.+..++ +|+|++||+|.|++. .+.+||.|++.. .++.|+||+...
T Consensus 10 ~~~~~~Alydy~a~~~~-------ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~-~g~~G~fP~nyV 80 (90)
T 3o5z_A 10 EGFQYRALYPFRRERPE-------DLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNER-TRQRGDFPGTYV 80 (90)
T ss_dssp SEEEEEECSCBCCCSTT-------BCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETT-TCCEEEEEGGGE
T ss_pred CCcEEEEeeeECCCCCC-------ccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCC-CCCEEEeehHHE
Confidence 45679999999998765 599999999999943 233899999753 378999998764
No 195
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=98.68 E-value=1.5e-08 Score=95.98 Aligned_cols=54 Identities=24% Similarity=0.542 Sum_probs=47.9
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...++||+|||.+..++ +|+|++||+|+|+++.|++||.|+. +|+.|+||+...
T Consensus 157 ~~~~~~al~~y~~~~~~-------eL~~~~Gd~i~v~~~~~~~W~~g~~---~g~~G~~P~~yv 210 (217)
T 1gri_A 157 QPTYVQALFDFDPQEDG-------ELGFRRGDFIHVMDNSDPNWWKGAC---HGQTGMFPRNYV 210 (217)
T ss_dssp CCCEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEC---SSCEEEEEGGGE
T ss_pred CceEEEecCCccCCCCC-------cCCCCCCCEEEEEEeCCCCeEEEEE---CCeEEEEeHHHe
Confidence 45689999999998765 6999999999999999999999997 578999999764
No 196
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=98.67 E-value=8.8e-08 Score=84.24 Aligned_cols=139 Identities=16% Similarity=0.055 Sum_probs=82.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhh-------------hhhc------ccHHHHHHHH--HcCCeEEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVL-------------TEVQ------TEIERVYELA--STLQLVVLD 208 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe-------------~~I~------TslesI~~vi--~sGKi~ILD 208 (510)
+||+|+||||+.+.| + .. ...+......|.... ..+. .-.+.+.+.+ ..++.+|+|
T Consensus 7 ~G~~GsGKsT~a~~L-~~~g-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~d 84 (179)
T 3lw7_A 7 TGMPGSGKSEFAKLL-KERG-AKVIVMSDVVRKRYSIEAKPGERLMDFAKRLREIYGDGVVARLCVEELGTSNHDLVVFD 84 (179)
T ss_dssp ECCTTSCHHHHHHHH-HHTT-CEEEEHHHHHHHHHHHHC---CCHHHHHHHHHHHHCTTHHHHHHHHHHCSCCCSCEEEE
T ss_pred ECCCCCCHHHHHHHH-HHCC-CcEEEHhHHHHHHHHhcCCChhHHHHHHHHHHhhCCHHHHHHHHHHHHHhcCCCeEEEe
Confidence 899999999999999 6 32 122222222222110 0000 1223344555 678999999
Q ss_pred eccCCchh--Hhhhc-CCCce-EEEEeCCCHHHHHHHHHhcCC----CcHHHHHHHH-HHHHHHHhcCCCCccEEEeCC-
Q psy6613 209 CDTINHPS--QLAKT-NLSPC-IVYLKISSPKVLQRLIKSRGK----SQTRHLNVQM-VAAEKLAQCPQEMFDVILDEN- 278 (510)
Q Consensus 209 ID~qg~~l--q~lks-~l~Pi-vIFIkPPS~e~L~~rLr~Rgt----~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvND- 278 (510)
-- .. +. +.++. .-.|. +||+.. +.+++.+|+..|+. .+.+.+..++ .....-...+....|++|.|+
T Consensus 85 g~-~~-~~~~~~l~~~~~~~~~~i~l~~-~~~~~~~R~~~R~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ad~vId~~~ 161 (179)
T 3lw7_A 85 GV-RS-LAEVEEFKRLLGDSVYIVAVHS-PPKIRYKRMIERLRSDDSKEISELIRRDREELKLGIGEVIAMADYIITNDS 161 (179)
T ss_dssp CC-CC-HHHHHHHHHHHCSCEEEEEEEC-CHHHHHHHHHTCC----CCCHHHHHHHHHHHHHHTHHHHHHTCSEEEECCS
T ss_pred CC-CC-HHHHHHHHHHhCCCcEEEEEEC-CHHHHHHHHHhccCCCCcchHHHHHHHHHhhhccChHhHHHhCCEEEECCC
Confidence 64 33 12 22333 22454 555554 57999999998876 4456666666 222211111225679999988
Q ss_pred CHHHHHHHHHHHHHHH
Q psy6613 279 QLEDACEHIAEYLEAY 294 (510)
Q Consensus 279 dLd~A~~eL~~ileai 294 (510)
+++++++++.+++..+
T Consensus 162 ~~~~~~~~i~~~l~~~ 177 (179)
T 3lw7_A 162 NYEEFKRRCEEVTDRV 177 (179)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 8999999999887765
No 197
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=98.67 E-value=3.4e-08 Score=78.08 Aligned_cols=59 Identities=19% Similarity=0.395 Sum_probs=43.6
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
.++|++.|+...+.. .....+|+|++||+|+|+++ .+++||.|++.. +++.|+||+...
T Consensus 6 ~~~~~~~y~~~~~~~-~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~-~g~~G~fP~~yv 65 (70)
T 1gcq_C 6 KMEVFQEYYGIPPPP-GAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTA-TNEVGWFPCNRV 65 (70)
T ss_dssp EEEECSCBSSSSCCG-GGCSCBCCBCTTCEEEEEECCTTCSEEEEEETT-TTEEEEEEGGGE
T ss_pred cceEEEEEEecCCCC-CCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCC-CCCEeEeehHHe
Confidence 355666666655431 11123799999999999999 689999998753 478999999764
No 198
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=98.67 E-value=2e-08 Score=77.96 Aligned_cols=41 Identities=15% Similarity=0.313 Sum_probs=37.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEE
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRL 94 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~ 94 (510)
..+++|+|||++..++ +|+|++||+|.|+++.|++||.|++
T Consensus 21 ~~~~~alydy~a~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~ 61 (62)
T 1g2b_A 21 KELVLALYDYQEKSPR-------EVTMKKGDILTLLNSTNKDWWKVEV 61 (62)
T ss_dssp SCEEEECSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred ceEEEEeeeECCCCCC-------ccCCCCCCEEEEEEecCCCEEEEEe
Confidence 4579999999998765 5999999999999999999999986
No 199
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=98.65 E-value=2.4e-08 Score=97.67 Aligned_cols=53 Identities=25% Similarity=0.540 Sum_probs=47.0
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++|+|||.+..++ +|+|++||+++|+++.|++||.|+. +|..|+||+....
T Consensus 3 ~~~~a~~~~~~~~~~-------el~~~~gd~i~v~~~~~~~w~~~~~---~g~~G~~P~~~v~ 55 (283)
T 3jv3_A 3 CQVIGMYDYTAQNDD-------ELAFSKGQIINVLNKEDPDWWKGEV---SGQVGLFPSNYVK 55 (283)
T ss_dssp EEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSTTEEEEEE---TTEEEEEEGGGEE
T ss_pred eEEEEccccCCCCCC-------cCCCCCCCEEEEEecCCCCEEEEEE---CCCCCcCCCcccc
Confidence 468999999998765 6999999999999999999999986 5789999988664
No 200
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=98.63 E-value=1.8e-08 Score=94.83 Aligned_cols=56 Identities=21% Similarity=0.345 Sum_probs=47.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|+|.+..++ +|+|++||+++|+++.++ ||.|+++..+|..|+||++...
T Consensus 17 ~~~~~Alydf~~~~~~-------eLs~~~Gd~i~v~~~~~~-W~~g~~~~~~g~~G~fP~nyV~ 72 (184)
T 3a98_A 17 ERHGVAIYNFQGSGAP-------QLSLQIGDVVRIQETCGD-WYRGYLIKHKMLQGIFPKSFIH 72 (184)
T ss_dssp CCEEEESSCBCCSSTT-------BCCBCTTCEEEEEEEETT-EEEEEETTEEEEEEEEEGGGEE
T ss_pred ceEEEEeeeeCCCCCC-------CCCcCCCCEEEEEecCCC-EEEEEEecCCCceEEECcceEE
Confidence 4579999999998764 699999999999999775 9999987656789999997654
No 201
>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}
Probab=98.57 E-value=4.5e-08 Score=81.70 Aligned_cols=57 Identities=12% Similarity=0.300 Sum_probs=46.2
Q ss_pred CCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec--CCCceEEEEccC-CCceeeecChhH
Q psy6613 45 NVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY--DSNWWIGRLVKE-GSECGFIPSPVK 109 (510)
Q Consensus 45 ~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~--d~~WWqar~v~~-~~~~GlIPS~~~ 109 (510)
+... +.|+|||.+..+. +|+|++||+++|++.. +++||.+|.... .++.||||+..+
T Consensus 16 ~~e~-~valydF~Ar~~~-------ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl 75 (82)
T 1u3o_A 16 GCEL-TVVLQDFSAAHSS-------ELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL 75 (82)
T ss_dssp CCEE-EECSSCBCCCSTT-------CCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred CceE-EEEEeeecCCCCC-------eeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence 3444 6799999999775 5999999999999976 589999998542 237899999875
No 202
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=98.56 E-value=4.6e-08 Score=98.31 Aligned_cols=62 Identities=24% Similarity=0.412 Sum_probs=52.6
Q ss_pred hhccCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 40 KARAKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 40 ~a~~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+..++...+++|+|||++..++ +|+|++||+|.|+++.|++||.|++. +|+.|+||+...+
T Consensus 140 ~P~~~p~~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~ 201 (308)
T 3qwy_A 140 AAYKKPIIEVVVGTFKFTGERET-------DLPFEQGERLEILSKTNQDWWEARNA--LGTTGLVPANYVQ 201 (308)
T ss_dssp EECCCCCCEEEEESSCBCCSSTT-------BCCBCTTCEEEEEECCSSSEEEEECT--TSCEEEEEGGGEE
T ss_pred cccccccceeEEEeceEcCCCCC-------cCcCCCCCEEEEEEcCCCCeEEEEeC--CCCeeEecccccc
Confidence 33345566789999999998775 59999999999999999999999973 5689999998876
No 203
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=98.54 E-value=6.6e-08 Score=91.15 Aligned_cols=55 Identities=18% Similarity=0.489 Sum_probs=47.7
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++||+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|..|+||+....
T Consensus 10 ~~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~ 64 (193)
T 1ng2_A 10 ILQTYRAIADYEKTSGS-------EMALSTGDVVEVVEKSESGWWFCQM---KAKRGWIPASFLE 64 (193)
T ss_dssp CCEEEECSSCBCCSSTT-------CCCBCTTCEEEEEECCTTSCCEEEE---CCCCCCCCGGGCC
T ss_pred cCcEEEEcCCcCCCCCC-------cCCCCCCCEEEEEEecCCCeEEEEE---CCeeeEechheEE
Confidence 34568999999998765 5999999999999999999999995 5789999987764
No 204
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Probab=98.53 E-value=8.1e-08 Score=90.56 Aligned_cols=54 Identities=22% Similarity=0.289 Sum_probs=47.5
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...++|+|||++..++ +|+|.+||+|.|+++.+++||.|+. +|..|+||+....
T Consensus 81 ~~~~~al~dy~a~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~---~g~~G~~P~~yv~ 134 (193)
T 1ng2_A 81 GEPYVAIKAYTAVEGD-------EVSLLEGEAVEVIHKLLDGWWVIRK---DDVTGYFPSMYLQ 134 (193)
T ss_dssp CEEEEESSCBCCCSTT-------BCCBCTTCEEEEEECCTTSEEEEEE---TTEEEEEEGGGEE
T ss_pred ceeeeeccccCCCCCC-------cccccCCCEEEEEEecCCCeEEEEE---CCCEEEEehHHeE
Confidence 3568899999998775 5999999999999999999999996 5789999998764
No 205
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A
Probab=98.53 E-value=1.6e-08 Score=97.89 Aligned_cols=56 Identities=25% Similarity=0.527 Sum_probs=48.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +|+|++||+|.|+++.|++||.|+.. +|+.|+||++..++
T Consensus 136 ~~~~~al~dy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 191 (230)
T 2dvj_A 136 AEYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVEK 191 (230)
T ss_dssp CCCCBCCSCCCCSSSS-------SCCCCSSCBCCCCBCSCSSEEEEECT--TSCEEEEEGGGSCC
T ss_pred ceeEEEeeeecCCCCC-------CccCcCCCEEEEEEccCCCcEEEEeC--CCCEEEEehHHeEE
Confidence 3468999999998775 59999999999999999999999953 57899999988765
No 206
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=98.52 E-value=9.1e-08 Score=100.59 Aligned_cols=55 Identities=15% Similarity=0.376 Sum_probs=48.5
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ +|+|++||+|.|+++.+++||.|+. +|..|+||+....
T Consensus 29 ~~~~~~al~~~~~~~~~-------eL~~~~gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 83 (466)
T 2pz1_A 29 SVVCAEALWDHVTMDDQ-------ELGFKAGDVIEVMDATNREWWWGRV---ADGEGWFPASFVR 83 (466)
T ss_dssp CCEEEEESSCBCCCCTT-------BCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred CccEEEEccccCCCCCC-------cCCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEehhHee
Confidence 35689999999998775 5999999999999999999999997 4789999998754
No 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=98.49 E-value=8e-08 Score=102.49 Aligned_cols=56 Identities=21% Similarity=0.475 Sum_probs=49.1
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
.+++|+|||++..++ +|+|++||+|+|+++.|++||+|+... +|+.|+||++..++
T Consensus 86 ~~~~alyd~~~~~~~-------el~~~~gd~i~v~~~~~~~ww~~~~~~-~g~~G~~P~~yv~~ 141 (535)
T 2h8h_A 86 TTFVALYDYESRTET-------DLSFKKGERLQIVNNTEGDWWLAHSLS-TGQTGYIPSNYVAP 141 (535)
T ss_dssp -CEEESSCBCCCSSS-------BCCBCTTCEEEEEECSSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred cEEEEccccCCcCCC-------cCCcCCCCEEEEEEecCCCceEEEECC-CCcceEecchhhcc
Confidence 458999999999875 599999999999999999999999864 47899999998865
No 208
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=98.45 E-value=1.3e-07 Score=98.47 Aligned_cols=55 Identities=22% Similarity=0.497 Sum_probs=48.6
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
+++|+|||.+..++ +|+|++||++.|+++.|++||.|+... +|+.|+||++...+
T Consensus 4 ~~~al~~~~~~~~~-------el~~~~gd~~~v~~~~~~~ww~~~~~~-~g~~G~~P~~yv~~ 58 (452)
T 1fmk_A 4 TFVALYDYESRTET-------DLSFKKGERLQIVNNTEGDWWLAHSLS-TGQTGYIPSNYVAP 58 (452)
T ss_dssp EEEESSCBCCCSSS-------BCCBCTTCEEEESCCCSSSEEEEEETT-TCCEEEEEGGGEEE
T ss_pred EEEECCccCCCCCC-------CCCccCCCEEEEeccCCCCceEEEEcC-CCcccccCcccccc
Confidence 58899999998876 599999999999999999999999864 47899999987754
No 209
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=98.45 E-value=1.4e-07 Score=96.24 Aligned_cols=53 Identities=11% Similarity=0.323 Sum_probs=47.3
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..++|+|||++..++ +|+|++||+|.|+++.|++||.|+. +|+.|+||++...
T Consensus 175 ~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 227 (341)
T 2dyb_A 175 PRAEALFDFTGNSKL-------ELNFKAGDVIFLLSRINKDWLEGTV---RGATGIFPLSFVK 227 (341)
T ss_dssp CEEEESSCBCCSSSS-------BCCBCTTCEEEEEEECSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred cEEEEEEeeCCCCCC-------cCCccCCCEEEEEEecCCCEEEEEE---CCcEEEechHHeE
Confidence 469999999998875 5999999999999999999999996 5789999998764
No 210
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=98.43 E-value=1.8e-07 Score=97.27 Aligned_cols=57 Identities=18% Similarity=0.317 Sum_probs=48.8
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEee-cCCCceEEEEccCCCceeeecChhHHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEK-YDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~-~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
...+++|+|||++..++ +|+|++||++.|+++ .|++||.|+.. .|..|+||++...+
T Consensus 10 ~~~~~~aly~~~~~~~~-------el~~~~gd~i~v~~~~~~~~ww~~~~~--~g~~G~~P~~yv~~ 67 (450)
T 1k9a_A 10 SGTECIAKYNFHGTAEQ-------DLPFCKGDVLTIVAVTKDPNWYKAKNK--VGREGIIPANYVQK 67 (450)
T ss_dssp TTCEEEESSCBCCSSSS-------BCCBCTTCEEEEEEECSSTTEEEEECT--TCCEEEEEGGGEEE
T ss_pred CCCEEEECCCcCccCCC-------cCCCCCCCEEEEeeccCCCCceEEEEC--CCceeeechhcccc
Confidence 34578999999999875 599999999999998 68899999973 47899999997654
No 211
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=98.43 E-value=1.8e-07 Score=94.01 Aligned_cols=56 Identities=25% Similarity=0.527 Sum_probs=48.8
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +|+|++||+|.|+++.|++||.|+.. +|+.|+||+....+
T Consensus 134 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~g~~~--~g~~G~~P~~yv~~ 189 (304)
T 2eyz_A 134 AEYVRALFDFNGNDEE-------DLPFKKGDILRIRDKPEEQWWNAEDS--EGKRGMIPVPYVEK 189 (304)
T ss_dssp CCEEEECSCCCCSCSS-------SCCCCTTCEEEEEECCSSSEEEEECT--TSCEEEEESTTEEE
T ss_pred ceeEEEEeeecCCCCC-------cCcccCCCEEEEEEecCCCcEEEEeC--CCceeccchhcccc
Confidence 4579999999998875 59999999999999999999999953 57899999987654
No 212
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=98.42 E-value=1.7e-06 Score=76.56 Aligned_cols=135 Identities=10% Similarity=0.024 Sum_probs=75.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhhhhhc--ccHHHHHHHHHcCCeEEEEeccCCch------------
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTEVQ--TEIERVYELASTLQLVVLDCDTINHP------------ 215 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~I~--TslesI~~vi~sGKi~ILDID~qg~~------------ 215 (510)
+||+|+||||+.+.|.+ ..-.| +..- .|..... ..+-.....+..|..+|+|-...+..
T Consensus 7 ~G~~GsGKsT~~~~L~~~l~~~~---i~~d---~~~~~~~~~~~~~~~~~~l~~~~~vi~dr~~~~~~v~~~~~~~~~~~ 80 (173)
T 3kb2_A 7 EGPDCCFKSTVAAKLSKELKYPI---IKGS---SFELAKSGNEKLFEHFNKLADEDNVIIDRFVYSNLVYAKKFKDYSIL 80 (173)
T ss_dssp ECSSSSSHHHHHHHHHHHHCCCE---EECC---CHHHHTTCHHHHHHHHHHHTTCCSEEEESCHHHHHHHTTTBTTCCCC
T ss_pred ECCCCCCHHHHHHHHHHHhCCee---ecCc---ccccchhHHHHHHHHHHHHHhCCCeEEeeeecchHHHHHHHHHhhHh
Confidence 89999999999999886 33111 1110 1111111 11112233567799999994332200
Q ss_pred ----hHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcH-HHHHHHH-HHHHHHHhcCCCCccEEEeCC--CHHHHHHH
Q psy6613 216 ----SQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQT-RHLNVQM-VAAEKLAQCPQEMFDVILDEN--QLEDACEH 286 (510)
Q Consensus 216 ----lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~-e~i~kRL-~aa~eLEq~~~~~FD~VIvND--dLd~A~~e 286 (510)
...++. ...|.+|+....+.+++.+|+..|+.... .+...++ +.-+++...|. .-+++|.++ ++++++++
T Consensus 81 ~~~~~~~l~~~~~~~~~~i~l~~~~e~~~~R~~~r~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~id~~~~~~~ev~~~ 159 (173)
T 3kb2_A 81 TERQLRFIEDKIKAKAKVVYLHADPSVIKKRLRVRGDEYIEGKDIDSILELYREVMSNAG-LHTYSWDTGQWSSDEIAKD 159 (173)
T ss_dssp CHHHHHHHHHHHTTTEEEEEEECCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHHHTCS-SCEEEEETTTSCHHHHHHH
T ss_pred hHHHHHHHhccCCCCCEEEEEeCCHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHhhcC-CCEEEEECCCCCHHHHHHH
Confidence 111111 12344444444678999999988654332 2344555 44455555554 456777765 78988888
Q ss_pred HHHHHH
Q psy6613 287 IAEYLE 292 (510)
Q Consensus 287 L~~ile 292 (510)
+...+.
T Consensus 160 I~~~~~ 165 (173)
T 3kb2_A 160 IIFLVE 165 (173)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 884443
No 213
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=98.37 E-value=3.2e-07 Score=71.54 Aligned_cols=39 Identities=18% Similarity=0.499 Sum_probs=34.8
Q ss_pred ccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 69 YAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 69 ~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+|+|++||+|.|+++.+++||.|+. +|+.|+||++...
T Consensus 4 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~ 42 (63)
T 1tuc_A 4 REVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVK 42 (63)
T ss_dssp CCCCBCTTCEEEEEECCSSSEEEEEE---TTEEEEEEGGGEE
T ss_pred cccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEeHHHEE
Confidence 47999999999999999999999985 5789999998764
No 214
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=98.36 E-value=2.3e-07 Score=87.74 Aligned_cols=51 Identities=25% Similarity=0.529 Sum_probs=40.2
Q ss_pred EEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhH
Q psy6613 49 AVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 49 ~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
-++|+|||.+..++ +|+|++||+|.|++.. +++||.|+. +|+.|+||++..
T Consensus 2 ~~~al~~~~~~~~~-------eLs~~~Gd~i~v~~~~~~~~W~~~~~---~g~~G~~P~~yv 53 (217)
T 1gri_A 2 EAIAKYDFKATADD-------ELSFKRGDILKVLNEECDQNWYKAEL---NGKDGFIPKNYI 53 (217)
T ss_dssp EEEECSCBCCCSSS-------CCCBCTTCEEEC------CCEEEEES---SSCEEEEEGGGE
T ss_pred EEEEeeccCCcCCC-------cCCCCCCCEEEEEeccCCCCeEeecc---CCccceECCccc
Confidence 47899999998875 5999999999999986 679999985 578999998765
No 215
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=98.34 E-value=4.2e-07 Score=94.42 Aligned_cols=56 Identities=21% Similarity=0.454 Sum_probs=47.3
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+++|+|||.+..++ +|+|++||+|.|+++ +++||.|+... +|+.|+||++...
T Consensus 7 ~~~~~~al~~~~~~~~~-------el~~~~gd~~~v~~~-~~~W~~~~~~~-~g~~G~~P~~yv~ 62 (454)
T 1qcf_A 7 IRIIVVALYDYEAIHHE-------DLSFQKGDQMVVLEE-SGEWWKARSLA-TRKEGYIPSNYVA 62 (454)
T ss_dssp CCCEEEESSCBCCCSTT-------BCCBCTTCEEEEEEC-CTTEEEEEETT-TCCEEEEEGGGEE
T ss_pred CCeEEEECcccCCcCCC-------cCcccCCCEEEEEec-CCCCeEEEECC-CCceEEecchhcc
Confidence 34578999999999875 599999999999998 57899999743 4689999998764
No 216
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.31 E-value=4.3e-07 Score=95.83 Aligned_cols=53 Identities=17% Similarity=0.196 Sum_probs=45.8
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeec-CCCceEEEEccCCCceeeecChhHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKY-DSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~-d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.+++|+|||.+..++ +|+|++||+++|++.. +++||.|+. .++.|+||++...
T Consensus 44 ~~~~alyd~~~~~~~-------els~~~gd~~~v~~~~~~~~w~~~~~---~~~~G~~P~~yv~ 97 (495)
T 1opk_A 44 NLFVALYDFVASGDN-------TLSITKGEKLRVLGYNHNGEWCEAQT---KNGQGWVPSNYIT 97 (495)
T ss_dssp CEEEESSCBCCCSTT-------BCCBCTTCEEEEEEECTTSSEEEEEC---SSCEEEEEGGGEE
T ss_pred cEEEEeCCcCCCCCC-------CCCccCCCEEEEeecCCCCCceeeee---cCCcceecccccc
Confidence 468899999998875 5999999999999986 889999997 3567999998763
No 217
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=97.64 E-value=7.9e-08 Score=96.58 Aligned_cols=56 Identities=30% Similarity=0.488 Sum_probs=49.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +|+|++||+|.|+++.|++||.|++. +|..|+||++...+
T Consensus 125 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~v~~~~~~~Ww~~~~~--~g~~G~~P~~yv~~ 180 (303)
T 2lqn_A 125 LEYVRTLYDFPGNDAE-------DLPFKKGEILVIIEKPEEQWWSARNK--DGRVGMIPVPYVEK 180 (303)
Confidence 4579999999998775 59999999999999999999999964 57899999988765
No 218
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=98.30 E-value=2.3e-07 Score=93.24 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=45.9
Q ss_pred eeEEEEeeccCCC--CCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGS--IDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~--~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
..+++|+|||.|. .+ .+|+|++||+|.|+++.+++||.|+. +|+.|+||+....
T Consensus 237 ~~~~~al~d~~~~a~~~-------~eL~~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~ 292 (304)
T 2eyz_A 237 PIYARVIQKRVPNAYDK-------TALALEVGELVKVTKINVSGQWEGEC---NGKRGHFPFTHVR 292 (304)
T ss_dssp CCCSCCSSCBCCCTTCS-------SCCCBCTTSCCEEEEECTTSCEEEEE---TTEEEECCCTTSC
T ss_pred CEEEEEeeeecCCCCCC-------CeecccCCCEEEEEEecCCCeEEEEE---CCceEEechHHEE
Confidence 3578999999954 43 36999999999999999999999997 4799999987653
No 219
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=98.30 E-value=8e-07 Score=82.82 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=83.1
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchhhh----------hhhc--------ccHHHHHHHHHc---CCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSSVL----------TEVQ--------TEIERVYELAST---LQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~pFe----------~~I~--------TslesI~~vi~s---GKi~ILDI 209 (510)
+||+|+||||+.++|.+......+....+.|..+. +.+. .-...+.+.+.. |+.+|||-
T Consensus 6 ~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ildg 85 (216)
T 3dl0_A 6 MGLPGAGKGTQGERIVEKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDG 85 (216)
T ss_dssp ECSTTSSHHHHHHHHHHHSSCCEEEHHHHHHHHHHTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHTSGGGTTCEEEES
T ss_pred ECCCCCCHHHHHHHHHHHhCCcEEeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcccccCCEEEeC
Confidence 89999999999999987223445555566665311 1111 112334444433 88999997
Q ss_pred ccCCchhHh---hhc-----CCCc-eEEEEeCCCHHHHHHHHHhc---------------------------------CC
Q psy6613 210 DTINHPSQL---AKT-----NLSP-CIVYLKISSPKVLQRLIKSR---------------------------------GK 247 (510)
Q Consensus 210 D~qg~~lq~---lks-----~l~P-ivIFIkPPS~e~L~~rLr~R---------------------------------gt 247 (510)
-+.. ... +.. ...| .+||+..|. +++.+|+..| ..
T Consensus 86 ~p~~--~~~~~~~~~~~~~~~~~~d~vi~l~~~~-e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~r~~ 162 (216)
T 3dl0_A 86 FPRT--VAQAEALEEILEEMGKPIDYVINIQVDK-DVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRAD 162 (216)
T ss_dssp CCCS--HHHHHHHHHHHHHTTCCCSEEEEEECCG-GGHHHHHHTEEEETTTCCEEETTTBCCSSTTBCTTTCCBEECCTT
T ss_pred CCCC--HHHHHHHHHHHHHcCCCCCEEEEEECCH-HHHHHHHHCCCcCCccCCccccccCCCcccCccccccccccCCCC
Confidence 6544 221 221 2335 567776654 8888888887 55
Q ss_pred CcHHHHHHHH-HHHHHH---HhcCCC-CccEEEe-CCCHHHHHHHHHHHHH
Q psy6613 248 SQTRHLNVQM-VAAEKL---AQCPQE-MFDVILD-ENQLEDACEHIAEYLE 292 (510)
Q Consensus 248 ~~~e~i~kRL-~aa~eL---Eq~~~~-~FD~VIv-NDdLd~A~~eL~~ile 292 (510)
++.+.+.+|| ...++. ...|.. ...++|. +.++++.++++.++|+
T Consensus 163 d~~e~i~~rl~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~v~~~i~~~l~ 213 (216)
T 3dl0_A 163 DNEETVTKRLEVNMKQTAPLLDFYDEKGYLVNVNGQQDIQDVYADLKVLLG 213 (216)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEECCCCHHHHHHHHHHHHH
Confidence 6678888888 333322 222211 1234554 4679999999986664
No 220
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*
Probab=97.63 E-value=8.7e-08 Score=96.27 Aligned_cols=57 Identities=12% Similarity=0.180 Sum_probs=47.9
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.++.++ +.+|+|++||+|.|+++.+++||.|+. +|+.|+||+...+.
T Consensus 237 ~~~~~alydy~~~~~~-----~~eLs~~~Gd~i~v~~~~~~gWw~g~~---~g~~G~fP~~yv~~ 293 (303)
T 2lqn_A 237 PVFAKAIQKRVPCAYD-----KTALALEVGDIVKVTRMNINGQWEGEV---NGRKGLFPFTHVKI 293 (303)
Confidence 4579999999865532 137999999999999999999999987 57899999987654
No 221
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=98.29 E-value=5.8e-06 Score=76.29 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=78.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh---------hhh-hhcccHHHHHHHHHcCCeEEEEeccCCc-hhHh
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS---------VLT-EVQTEIERVYELASTLQLVVLDCDTINH-PSQL 218 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p---------Fe~-~I~TslesI~~vi~sGKi~ILDID~qg~-~lq~ 218 (510)
+|++|+||||+.+.|.. ....+--......... |.. .....+..+.+.+..|..+|+|...... ....
T Consensus 24 ~G~~GsGKSTla~~L~~~lg~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~vivd~~~~~~~~~~~ 103 (202)
T 3t61_A 24 MGVSGSGKSSVGEAIAEACGYPFIEGDALHPPENIRKMSEGIPLTDDDRWPWLAAIGERLASREPVVVSCSALKRSYRDK 103 (202)
T ss_dssp ECSTTSCHHHHHHHHHHHHTCCEEEGGGGCCHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTSSSCCEEECCCCSHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHhCCEEEeCCcCcchhhHHHHhcCCCCCchhhHHHHHHHHHHHhcCCCEEEECCCCCHHHHHH
Confidence 99999999999999876 3211111111111100 000 0013455667777899999999765330 0122
Q ss_pred hhc-CCCc-eEEEEeCCCHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHhcCCCCccEEEeC-CCHHHHHHHHHHHHHHH
Q psy6613 219 AKT-NLSP-CIVYLKISSPKVLQRLIKSRGKS-QTRHLNVQMVAAEKLAQCPQEMFDVILDE-NQLEDACEHIAEYLEAY 294 (510)
Q Consensus 219 lks-~l~P-ivIFIkPPS~e~L~~rLr~Rgt~-~~e~i~kRL~aa~eLEq~~~~~FD~VIvN-DdLd~A~~eL~~ileai 294 (510)
++. ...| .+||+.+ +.+++.+|+..|+.. ...+...+. ....+..+...-|++|.+ .+++++++++.++|...
T Consensus 104 l~~~~~~~~~vi~l~~-~~e~~~~Rl~~R~~~~~~~~~~~~~--~~~~~~~~~~~~~~~Id~~~~~~e~~~~I~~~l~~~ 180 (202)
T 3t61_A 104 LRESAPGGLAFVFLHG-SESVLAERMHHRTGHFMPSSLLQTQ--LETLEDPRGEVRTVAVDVAQPLAEIVREALAGLARL 180 (202)
T ss_dssp HHHTSTTCCEEEEEEC-CHHHHHHHHHHHHSSCCCHHHHHHH--HHHCCCCTTSTTEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEEEEEeC-CHHHHHHHHHHhhccCCCHHHHHHH--HHhcCCCCCCCCeEEEeCCCCHHHHHHHHHHHHHHh
Confidence 222 2233 4566665 589999999887543 222222222 111222233345667754 67999999998887643
No 222
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=98.28 E-value=6.8e-06 Score=76.16 Aligned_cols=140 Identities=10% Similarity=0.087 Sum_probs=77.1
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh----------hhh-hhc---ccH-HHHHHHHHcCCeEEE
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----------VLT-EVQ---TEI-ERVYELASTLQLVVL 207 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----------Fe~-~I~---Tsl-esI~~vi~sGKi~IL 207 (510)
.+.+| +||+|+||||+.+.|.. .. ...+.--...+.. |.. ... +.+ ..+...+..|..+|+
T Consensus 28 ~g~~i~l~G~~GsGKSTl~~~L~~~~g-~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~vii 106 (200)
T 4eun_A 28 PTRHVVVMGVSGSGKTTIAHGVADETG-LEFAEADAFHSPENIATMQRGIPLTDEDRWPWLRSLAEWMDARADAGVSTII 106 (200)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHC-CEEEEGGGGSCHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHhhC-CeEEcccccccHHHHHHHhcCCCCCCcccccHHHHHHHHHHHHHhcCCCEEE
Confidence 34555 99999999999998876 32 1111110011110 100 000 122 223445578999999
Q ss_pred EeccCCchhHh---hhcCC-CceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCCCCccEEEeCC-CHH
Q psy6613 208 DCDTINHPSQL---AKTNL-SPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQEMFDVILDEN-QLE 281 (510)
Q Consensus 208 DID~qg~~lq~---lks~l-~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvND-dLd 281 (510)
|+.... ... ++... ...+||+.+| .+++.+|+..|+..... ...+ ..-.+.+..|....|++|.|+ +++
T Consensus 107 d~~~~~--~~~~~~l~~~~~~~~vv~l~~~-~e~l~~Rl~~R~~~~~~--~~~l~~~~~~~~~~~~~~~~~~Id~~~~~~ 181 (200)
T 4eun_A 107 TCSALK--RTYRDVLREGPPSVDFLHLDGP-AEVIKGRMSKREGHFMP--ASLLQSQLATLEALEPDESGIVLDLRQPPE 181 (200)
T ss_dssp EECCCC--HHHHHHHTTSSSCCEEEEEECC-HHHHHHHHTTCSCCSSC--GGGHHHHHHHCCCCCTTSCEEEEETTSCHH
T ss_pred Echhhh--HHHHHHHHHhCCceEEEEEeCC-HHHHHHHHHhcccCCCC--HHHHHHHHHHhCCCCCCCCeEEEECCCCHH
Confidence 986544 222 22211 3467788865 89999999888653321 1112 111222334555578988764 688
Q ss_pred HHHHHHHHHH
Q psy6613 282 DACEHIAEYL 291 (510)
Q Consensus 282 ~A~~eL~~il 291 (510)
++++++.++|
T Consensus 182 e~~~~I~~~l 191 (200)
T 4eun_A 182 QLIERALTWL 191 (200)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777444
No 223
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=98.27 E-value=8.6e-07 Score=80.58 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=71.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------hhhhh-----c-------------ccHHHHHHHHHcCC
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------VLTEV-----Q-------------TEIERVYELASTLQ 203 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------Fe~~I-----~-------------TslesI~~vi~sGK 203 (510)
.|++|+||||+.++|.+ ... .++.+- +||.| +.+.+ . ..++.|...+.+|+
T Consensus 6 ~G~~GsGKsT~~~~L~~~l~~-~g~~v~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~~l~~g~ 83 (197)
T 2z0h_A 6 EGIDGSGKSTQIQLLAQYLEK-RGKKVI-LKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTEIKQYLSEGY 83 (197)
T ss_dssp ECSTTSSHHHHHHHHHHHHHH-CCC-EE-EEESSCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHTTC----C
T ss_pred ECCCCCCHHHHHHHHHHHHHH-CCCeEE-EeeCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 89999999999999887 311 122221 33333 00000 0 11122555677899
Q ss_pred eEEEEec------cCCch-------hHhhhc----CCCce-EEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHH
Q psy6613 204 LVVLDCD------TINHP-------SQLAKT----NLSPC-IVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLA 264 (510)
Q Consensus 204 i~ILDID------~qg~~-------lq~lks----~l~Pi-vIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLE 264 (510)
.||+|-- .+|.+ +..+.. ...|- +||+.. +.+++.+|+..|+....++..+++ .+-.++.
T Consensus 84 ~vi~dr~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~-~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~ 162 (197)
T 2z0h_A 84 AVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDV-DVETALKRKGELNRFEKREFLERVREGYLVLA 162 (197)
T ss_dssp EEEEESCHHHHHHHTTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEEC-CHHHHHHHC---CCCCCHHHHHHHHHHHHHHH
T ss_pred EEEECCChhHHHHHHHhccCCCHHHHHHHHHHhcCCCCCCEEEEEeC-CHHHHHHHHhccCcccHHHHHHHHHHHHHHHH
Confidence 9999921 22200 111111 22454 455544 578899998888655445666777 4445666
Q ss_pred hcCCCCccE-EEe-CCCHHHHHHHHHHHHHH
Q psy6613 265 QCPQEMFDV-ILD-ENQLEDACEHIAEYLEA 293 (510)
Q Consensus 265 q~~~~~FD~-VIv-NDdLd~A~~eL~~ilea 293 (510)
..++ .++ +|. |.++++.++++.++++.
T Consensus 163 ~~~~--~~~~~Id~~~~~e~~~~~i~~~l~~ 191 (197)
T 2z0h_A 163 REHP--ERIVVLDGKRSIEEIHRDVVREVKR 191 (197)
T ss_dssp HHCT--TTEEEEETTSCHHHHHHHHHHHTTC
T ss_pred HhCC--CCEEEEeCCCCHHHHHHHHHHHHHH
Confidence 5543 234 344 35688888888866543
No 224
>4eaq_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, MTBI, transferase; HET: ATM; 1.85A {Staphylococcus aureus subsp} PDB: 4dwj_A* 4f4i_A
Probab=98.26 E-value=3.3e-06 Score=81.09 Aligned_cols=145 Identities=12% Similarity=0.119 Sum_probs=80.8
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------hhhhhc--------------------ccHHH
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------VLTEVQ--------------------TEIER 194 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------Fe~~I~--------------------Tsles 194 (510)
.+.+| .||+|+||||+.++|.+ ....+. + .+||.| +.+.+. .-.+.
T Consensus 25 ~g~~i~i~G~~GsGKsT~~~~l~~~l~~~~~--~-~~~~~p~~~~~g~~i~~~~~~~~~~~~~~~~ll~~a~r~~~~~~~ 101 (229)
T 4eaq_A 25 MSAFITFEGPEGSGKTTVINEVYHRLVKDYD--V-IMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLK 101 (229)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHHHHTTTSC--E-EEECTTTTCHHHHHHHHHTTC---CCHHHHHHHHHHHHHHHCCCC
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHHhcCCC--c-eeecCCCCCchHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555 89999999999999988 332222 2 123333 111110 00112
Q ss_pred HHHHHHcCCeEEEE----------eccCCch---hHhhhc----CCCce-EEEEeCCCHHHHHHHHHhcCCC------cH
Q psy6613 195 VYELASTLQLVVLD----------CDTINHP---SQLAKT----NLSPC-IVYLKISSPKVLQRLIKSRGKS------QT 250 (510)
Q Consensus 195 I~~vi~sGKi~ILD----------ID~qg~~---lq~lks----~l~Pi-vIFIkPPS~e~L~~rLr~Rgt~------~~ 250 (510)
|...+++|++||+| .-+.+.. +..+.. .+.|- +||+..| .+++.+|+..|+.. ..
T Consensus 102 i~~~l~~g~~Vi~DRy~~s~~ayqg~~r~~~~~~~~~l~~~~~~~~~pd~vi~L~~~-~e~~~~R~~~R~~~~dr~e~~~ 180 (229)
T 4eaq_A 102 VIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVS-AEVGRERIIKNSRDQNRLDQED 180 (229)
T ss_dssp CHHHHHTTCEEEEECCHHHHCCCCCCCSCSCHHHHHHHHHHHHTTCCCSEEEEEECC-HHHHHHHHHHC-----CCCHHH
T ss_pred HHHHHHCCCEEEECCchhHHHHHHHhhcCCCHHHHHHHHHHHhcCCCCCEEEEEeCC-HHHHHHHHHhcCCCccchhhhh
Confidence 34566799999999 3222200 112221 34554 4555554 68999999888532 12
Q ss_pred HHHHHHH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHH
Q psy6613 251 RHLNVQM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYW 295 (510)
Q Consensus 251 e~i~kRL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~ 295 (510)
.+..+|+ +.-.++...++..| .+|. +.++++.++++.++|+.++
T Consensus 181 ~~~~~rv~~~y~~l~~~~~~~~-~vIDa~~s~eev~~~I~~~l~~~l 226 (229)
T 4eaq_A 181 LKFHEKVIEGYQEIIHNESQRF-KSVNADQPLENVVEDTYQTIIKYL 226 (229)
T ss_dssp HHHHHHHHHHHHHHTTTCTTTE-EEEETTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCE-EEEeCCCCHHHHHHHHHHHHHHHh
Confidence 3455666 44455655544322 2333 4779999999998887654
No 225
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Probab=98.24 E-value=8.6e-07 Score=96.00 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=48.7
Q ss_pred eEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 48 FAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 48 ~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..+||+|||.++.++ +|+|++||+|.|+++.+++||.|+... +|+.|+||+....+
T Consensus 443 ~~~~aly~y~a~~~d-------ELs~~~GD~i~v~~~~~~gW~~G~~~~-~g~~G~fPsnyV~~ 498 (526)
T 2de0_X 443 HNQIAIYAHQPRTAD-------EIPMEPGDIIGVAGNHWDGYSKGVNRK-LGRTGLYPSYKVRE 498 (526)
T ss_dssp CEEEECSCBCCSSTT-------BCCBCTTCEEEEEEECSSSEEEEEETT-TTEEEEEEGGGEEE
T ss_pred cceEEeecCCCCCCC-------cCCcCCCCEEEEccccCCCeeEEEeCC-CCCEEEECchheeE
Confidence 458999999999876 599999999999999999999999754 47899999987643
No 226
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=98.24 E-value=7.5e-06 Score=73.47 Aligned_cols=131 Identities=16% Similarity=0.022 Sum_probs=76.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCcee-eecC--CCchhh-h-----------------hhh----cccHHHHHHHHHcCCe
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAI-MERS--NSRSSV-L-----------------TEV----QTEIERVYELASTLQL 204 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~-sVsh--TTR~pF-e-----------------~~I----~TslesI~~vi~sGKi 204 (510)
+|++|+||||+.+.|.+ .+..|.. .+.. .++++. . ..+ ..-.+.+..+++.|..
T Consensus 9 ~G~~GsGKST~a~~La~~l~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 88 (178)
T 1qhx_A 9 NGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVAMARAGAR 88 (178)
T ss_dssp ECCTTSSHHHHHHHHHHHSSSCEEEEEHHHHHHHSCGGGGTSTTSEEECTTSCEEECHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred ECCCCCCHHHHHHHHHHhcCCCeEEeccchHhhhcchhhccchhhccccCCCccccchhHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999999999988 5433321 1110 122220 0 000 0223456777889999
Q ss_pred EEEEecc-CCchh--Hhhhc--CCCc-eEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcC-CCCccEEEeC
Q psy6613 205 VVLDCDT-INHPS--QLAKT--NLSP-CIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCP-QEMFDVILDE 277 (510)
Q Consensus 205 ~ILDID~-qg~~l--q~lks--~l~P-ivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~-~~~FD~VIvN 277 (510)
||+|+.. ++ +. ...+. .-.+ ++||+.+ +.+++.+|++.|+....... . ..++..+ ...+|++|.+
T Consensus 89 vi~~~~~~~~-~~~~~~~~~~~~~~~~~~v~l~~-~~e~l~~R~~~r~~~~~~~~----~--~~~~~~~~~~~~d~~idt 160 (178)
T 1qhx_A 89 IIIDDVFLGG-AAAQERWRSFVGDLDVLWVGVRC-DGAVAEGRETARGDRVAGMA----A--KQAYVVHEGVEYDVEVDT 160 (178)
T ss_dssp EEEEECCTTT-HHHHHHHHHHHTTCCEEEEEEEC-CHHHHHHHHHHTSSSCTTHH----H--HHTTGGGTTCCCSEEEET
T ss_pred EEEEeccccC-hHHHHHHHHHhcCCcEEEEEEEC-CHHHHHHHHHhhCCcccchh----h--hhchhhccCCCCcEEEEC
Confidence 9999976 33 11 12222 2234 5677765 69999999998875432211 1 1122211 1348999986
Q ss_pred C--CHHHHHHHHHH
Q psy6613 278 N--QLEDACEHIAE 289 (510)
Q Consensus 278 D--dLd~A~~eL~~ 289 (510)
+ +.+++++++.+
T Consensus 161 ~~~~~~~~~~~I~~ 174 (178)
T 1qhx_A 161 THKESIECAWAIAA 174 (178)
T ss_dssp TSSCHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHH
Confidence 5 56777777763
No 227
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=98.23 E-value=1.7e-06 Score=83.43 Aligned_cols=138 Identities=14% Similarity=0.087 Sum_probs=81.9
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchh----------hhhhhc----cc----HHHHHHHHHc---CCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS----------VLTEVQ----TE----IERVYELAST---LQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p----------Fe~~I~----Ts----lesI~~vi~s---GKi~ILDI 209 (510)
+||+|+||||+.++|.+......+++.+++|.. +.+.+. .+ ...+...+.. ++.+|||.
T Consensus 35 ~G~~GsGKsT~a~~L~~~~g~~~is~~~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ildg 114 (243)
T 3tlx_A 35 LGAPGSGKGTQSLNLKKSHCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSLVDEKLKTPQCKKGFILDG 114 (243)
T ss_dssp ECCTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHTTSSSHHHHHHHHHHHTTCCCCHHHHHHHHHHHTTSGGGSSEEEEES
T ss_pred ECCCCCCHHHHHHHHHHHhCCeEEecHHHHHHHHhccchHHHHHHHHHhcCCCCcHHHHHHHHHHHHhcccccCCEEecC
Confidence 999999999999999872234556666666653 111111 11 2233444433 88899999
Q ss_pred ccCCchhHhhhc--------CCCc-eEEEEeCCCHHHHHHHHHhcCC---------------------------------
Q psy6613 210 DTINHPSQLAKT--------NLSP-CIVYLKISSPKVLQRLIKSRGK--------------------------------- 247 (510)
Q Consensus 210 D~qg~~lq~lks--------~l~P-ivIFIkPPS~e~L~~rLr~Rgt--------------------------------- 247 (510)
.+.+ ....+. ...| .+||+..| .+++.+|+.+|+.
T Consensus 115 ~p~~--~~q~~~l~~~l~~~~~~~d~vi~l~~p-~e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~r~d 191 (243)
T 3tlx_A 115 YPRN--VKQAEDLNKLLQKNQTKLDGVFYFNVP-DEVLVNRISGRLIHKPSGRIYHKIFNPPKVPFRDDVTNEPLIQRED 191 (243)
T ss_dssp CCCS--HHHHHHHHHHHHHTTCCCCEEEEEECC-HHHHHHHHHTEEEETTTTEEEETTTBCCSSTTBCTTTCCBCBCCGG
T ss_pred CCCc--HHHHHHHHHHHHHcCCCCceEEEEeCC-HHHHHHHHHcCCCCcccCcccccccCCCcccCccccccccccCCCC
Confidence 8887 433221 1334 44444444 4899999988752
Q ss_pred CcHHHHHHHH-HHHHHH---HhcCCCCccEEEe--CCCHHHHHHHHHHHH
Q psy6613 248 SQTRHLNVQM-VAAEKL---AQCPQEMFDVILD--ENQLEDACEHIAEYL 291 (510)
Q Consensus 248 ~~~e~i~kRL-~aa~eL---Eq~~~~~FD~VIv--NDdLd~A~~eL~~il 291 (510)
++.+.+.+|| ...++. ...|...--++.+ +.+.++.++++.++|
T Consensus 192 d~~e~i~~Rl~~~~~~~~~l~~~y~~~~~~~~id~~~~~~~v~~~i~~~l 241 (243)
T 3tlx_A 192 DNEDVLKKRLTVFKSETSPLISYYKNKNLLINLDATQPANDLEKKISQHI 241 (243)
T ss_dssp GSHHHHHHHHHHHHHHTTHHHHHHHHTTCEEEEETTSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHHHHHHH
Confidence 4567888888 433332 2222111012333 357999999888655
No 228
>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=98.22 E-value=4.7e-07 Score=78.27 Aligned_cols=53 Identities=11% Similarity=0.079 Sum_probs=42.3
Q ss_pred EEEEeecc--CCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHH
Q psy6613 49 AVRTNVKY--DGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 49 ~VRAlfdY--~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.++|++++ ..... ..|+|++|++|.|+++.+++||.+|+ ..|..|+||.+.++
T Consensus 41 ~~~a~~~f~~~k~g~-------~DLpfkkGE~LeVI~~~e~~wwLcRN--s~GkyGyVP~~yl~ 95 (102)
T 1ri9_A 41 STKVTTSITSKKWGT-------RDLQVKPGESLEVIQTTDDTKVLCRN--EEGKYGYVLRSYLA 95 (102)
T ss_dssp CCBCCTTSCSSCCCT-------TBCCCCTTCBCEEEEESSSSEEEEEE--TTTEEEEEEGGGSC
T ss_pred EEEEeeccccccCCc-------ccCCcCCCCEEEEEEeCCCCEEEEEC--CCCCCCceeHHHhc
Confidence 46677776 22222 35889999999999999999999999 46899999998764
No 229
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=98.17 E-value=7.9e-07 Score=71.95 Aligned_cols=40 Identities=18% Similarity=0.497 Sum_probs=35.4
Q ss_pred ccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 69 YAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 69 ~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
.+|+|++||+|.|+++.+++||.|+. +|+.|+||++....
T Consensus 6 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~---~g~~G~~P~~yv~~ 45 (77)
T 2jmc_A 6 REVTMKKGDILTLLNSTNKDWWKVEV---NDRQGFVPAAYVKK 45 (77)
T ss_dssp CCCCCCTTCEEECCCCCCSSCCCEEE---TTEEECCCGGGEEE
T ss_pred CccCCCCCCEEEEEEecCCCEEEEEE---CCcEEEEEeeEEEE
Confidence 47999999999999999999999986 57899999987643
No 230
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=98.11 E-value=4.7e-05 Score=69.53 Aligned_cols=141 Identities=11% Similarity=0.029 Sum_probs=79.2
Q ss_pred EecCcCChHHHHHHHhcCCCCc-eeeecCCCchh---------hhh--hh-------------cccHHHHHHHHHcCCeE
Q psy6613 151 ITRVTADISLAKRSLMSNPSKR-AIMERSNSRSS---------VLT--EV-------------QTEIERVYELASTLQLV 205 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F-~~sVshTTR~p---------Fe~--~I-------------~TslesI~~vi~sGKi~ 205 (510)
+|++|+||||+.+.|.+....+ .+.+.+.+|.. |.. .+ .+.++.|...+.+|+.|
T Consensus 10 ~G~~GsGKsT~~~~L~~~l~g~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~l~~~~r~~~~~~i~~~l~~~~~v 89 (204)
T 2v54_A 10 EGLDKSGKTTQCMNIMESIPANTIKYLNFPQRSTVTGKMIDDYLTRKKTYNDHIVNLLFCANRWEFASFIQEQLEQGITL 89 (204)
T ss_dssp ECCTTSSHHHHHHHHHHTSCGGGEEEEESSCTTSHHHHHHHHHHTSSCCCCHHHHHHHHHHHHHTTHHHHHHHHHTTCEE
T ss_pred EcCCCCCHHHHHHHHHHHHCCCceEEEecCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
Confidence 8999999999999998832223 34455555422 110 00 02234566677899999
Q ss_pred EEEeccC---------Cch---hHhhhcC-CCc-eEEEEeCCCHHHHHHHHHhcCCCcHH--HHHHHH-HHHHHHHhcCC
Q psy6613 206 VLDCDTI---------NHP---SQLAKTN-LSP-CIVYLKISSPKVLQRLIKSRGKSQTR--HLNVQM-VAAEKLAQCPQ 268 (510)
Q Consensus 206 ILDID~q---------g~~---lq~lks~-l~P-ivIFIkPPS~e~L~~rLr~Rgt~~~e--~i~kRL-~aa~eLEq~~~ 268 (510)
|+|--+. |.. +..+... ..| .+||+..|. +++.+ .|+.+..+ +..+|+ .+-.++...+
T Consensus 90 i~Dr~~~s~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~l~~~~-e~~~~---~R~~d~~e~~~~~~rl~~~y~~~~~~~- 164 (204)
T 2v54_A 90 IVDRYAFSGVAYAAAKGASMTLSKSYESGLPKPDLVIFLESGS-KEINR---NVGEEIYEDVTFQQKVLQEYKKMIEEG- 164 (204)
T ss_dssp EEESCHHHHHHHHHHTTCCHHHHHHHHTTSBCCSEEEEECCCH-HHHTT---CCSSSTTCCSHHHHHHHHHHHHHHTTC-
T ss_pred EEECchhhHHHHHHccCCCHHHHHHHhcCCCCCCEEEEEeCCH-HHHHh---hcCcccccHHHHHHHHHHHHHHHHHhC-
Confidence 9993221 100 1222221 223 567777664 44444 45433222 566677 3344444433
Q ss_pred CCccEEEeC--CCHHHHHHHHHHHHHHHHHh
Q psy6613 269 EMFDVILDE--NQLEDACEHIAEYLEAYWRA 297 (510)
Q Consensus 269 ~~FD~VIvN--DdLd~A~~eL~~ileai~~a 297 (510)
..++++++ .++++.++++.++|..++..
T Consensus 165 -~~~~~~Id~~~~~~~v~~~i~~~l~~~l~~ 194 (204)
T 2v54_A 165 -DIHWQIISSEFEEDVKKELIKNIVIEAIHT 194 (204)
T ss_dssp -SSCEEEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -CCcEEEEECCCCHHHHHHHHHHHHHHHHhh
Confidence 23544443 46999999999888877653
No 231
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=98.09 E-value=4.2e-07 Score=96.95 Aligned_cols=55 Identities=29% Similarity=0.458 Sum_probs=0.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC-CCceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD-SNWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d-~~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
...+||+|||.+..++ +|+|.+||+|.|++..+ ++||.|+.. .|..|+||+....
T Consensus 428 ~~~~~alydy~~~~~~-------eLsf~~Gd~i~vl~~~~~~~Ww~g~~~--~g~~G~~P~nyv~ 483 (486)
T 3haj_A 428 EVRVRALYDYEGQEHD-------ELSFKAGDELTKMEDEDEQGWCKGRLD--NGQVGLYPANYVE 483 (486)
T ss_dssp -----------------------------------------------------------------
T ss_pred CeEEEEccccCCCCCC-------cCccCCCCEEEEEEecCCCCeeEEEeC--CCCEEEEeHHHce
Confidence 4579999999999875 59999999999999874 599999973 3789999998764
No 232
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=98.09 E-value=1.6e-05 Score=71.49 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=72.8
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCC----------chhhh---h---hh-----c----ccHHHHHHHH--HcC
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNS----------RSSVL---T---EV-----Q----TEIERVYELA--STL 202 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTT----------R~pFe---~---~I-----~----TslesI~~vi--~sG 202 (510)
+|++|+||||+.+.|.+ ... .++.+.|+. |..+. . .+ . ...+.|...+ ..|
T Consensus 7 ~G~~GsGKsT~~~~L~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~ 85 (194)
T 1nks_A 7 TGIPGVGKSTVLAKVKEILDN-QGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEARAGGE 85 (194)
T ss_dssp EECTTSCHHHHHHHHHHHHHT-TTCCEEEEEHHHHHHHHHHTTTSCSSHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred ECCCCCCHHHHHHHHHHHHHh-cCceEEEEECChHHHHHHHhcccccchhhhhcCCHHHHHHHHHHHHHHHHHHhhccCC
Confidence 89999999999999987 331 122223331 11100 0 00 0 0112244555 789
Q ss_pred CeEEEEe----ccC-C----chhHhhhcCCCceEEEEeCCCHHHHHHHHHh--cCC-C--cHHHH--HHHH-HHHHHHHh
Q psy6613 203 QLVVLDC----DTI-N----HPSQLAKTNLSPCIVYLKISSPKVLQRLIKS--RGK-S--QTRHL--NVQM-VAAEKLAQ 265 (510)
Q Consensus 203 Ki~ILDI----D~q-g----~~lq~lks~l~PivIFIkPPS~e~L~~rLr~--Rgt-~--~~e~i--~kRL-~aa~eLEq 265 (510)
+.||+|- ..+ + .....++....-.+||+..|.-..+++|+.. |+. + ..+.+ ..++ ..-.++..
T Consensus 86 ~~vi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~~~~~~~~rr~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (194)
T 1nks_A 86 GYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASA 165 (194)
T ss_dssp SEEEEEECSEEEETTEEEESSCHHHHHHHCCSEEEEEECCHHHHHHHHHHCTTTCCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCchhhccccccccCCCHHHHHhcCCCEEEEEeCCHHHHHHHHHhhcccCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 9999995 333 1 0012333211246778877765566677777 765 2 23332 2334 32233332
Q ss_pred cCCCCccEEEe-CCC--HHHHHHHHHHHH
Q psy6613 266 CPQEMFDVILD-ENQ--LEDACEHIAEYL 291 (510)
Q Consensus 266 ~~~~~FD~VIv-NDd--Ld~A~~eL~~il 291 (510)
.|. ..+++++ |++ ++++++++.++|
T Consensus 166 ~~~-~~~~~~I~d~~~~~e~v~~~I~~~l 193 (194)
T 1nks_A 166 VLA-GSTVKVIVNVEGDPSIAANEIIRSM 193 (194)
T ss_dssp HHH-TCEEEEEECCSSCHHHHHHHHHHHH
T ss_pred Hhc-CCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 221 2355666 665 888888887554
No 233
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=98.08 E-value=2.9e-06 Score=78.80 Aligned_cols=139 Identities=12% Similarity=0.066 Sum_probs=81.0
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchhh--------------hhhhc----ccHHHHHHHHHc---CCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSSV--------------LTEVQ----TEIERVYELAST---LQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~pF--------------e~~I~----TslesI~~vi~s---GKi~ILDI 209 (510)
+||+|+||||+.+.|.+......+....+.|..+ ..... .-...+.+.+.. |+.+|+|-
T Consensus 6 ~G~~GsGKsT~a~~L~~~~~~~~i~~d~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ildg 85 (216)
T 3fb4_A 6 MGLPGAGKGTQAEQIIEKYEIPHISTGDMFRAAIKNGTELGLKAKSFMDQGNLVPDEVTIGIVHERLSKDDCQKGFLLDG 85 (216)
T ss_dssp ECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHHTTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHTSGGGTTCEEEES
T ss_pred ECCCCCCHHHHHHHHHHHhCCcEeeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcccCCCcEEEeC
Confidence 8999999999999997721234444545555531 11101 112334444433 88999997
Q ss_pred ccCCchhHh---hhc-----CCCc-eEEEEeCCCHHHHHHHHHhc---------------------------------CC
Q psy6613 210 DTINHPSQL---AKT-----NLSP-CIVYLKISSPKVLQRLIKSR---------------------------------GK 247 (510)
Q Consensus 210 D~qg~~lq~---lks-----~l~P-ivIFIkPPS~e~L~~rLr~R---------------------------------gt 247 (510)
-+.. ... +.. ...| .+||+..| .+++.+|+..| ..
T Consensus 86 ~p~~--~~~~~~l~~~~~~~~~~~d~vi~l~~~-~e~~~~Rl~~R~~~~~~g~~y~~~~~pp~~~~~~~~~~~~l~~r~~ 162 (216)
T 3fb4_A 86 FPRT--VAQADALDSLLTDLGKKLDYVLNIKVE-QEELMKRLTGRWICKTCGATYHTIFNPPAVEGICDKDGGELYQRID 162 (216)
T ss_dssp CCCS--HHHHHHHHHHHHHTTCCCSEEEEEECC-HHHHHHHHHSEEEETTTCCEEETTTBCCSSTTBCTTTCCBEECCGG
T ss_pred CCCC--HHHHHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHcCCCCCccCCccccccCCCCcccccccccCccccCCC
Confidence 6544 222 221 2235 56777665 58889999887 34
Q ss_pred CcHHHHHHHH-HHHHHH---HhcCC-CCccEEEe-CCCHHHHHHHHHHHHH
Q psy6613 248 SQTRHLNVQM-VAAEKL---AQCPQ-EMFDVILD-ENQLEDACEHIAEYLE 292 (510)
Q Consensus 248 ~~~e~i~kRL-~aa~eL---Eq~~~-~~FD~VIv-NDdLd~A~~eL~~ile 292 (510)
++.+.+.+|| ...++. ...|. ....++|. +.++++.++++.++|.
T Consensus 163 d~~e~i~~rl~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~v~~~i~~~l~ 213 (216)
T 3fb4_A 163 DKPETVKNRLDVNMKQTQPLLDFYSQKGVLKDIDGQQDIKKVFVDINDLLG 213 (216)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhHHHHHHHHHcCCcEEEEECCCCHHHHHHHHHHHHH
Confidence 5567788888 333322 22221 11235555 3578999998886664
No 234
>1v1c_A Obscurin; muscle, sarcomere, adapter, myogenesis, SH3-domain; NMR {Homo sapiens}
Probab=98.07 E-value=5.5e-06 Score=67.26 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=44.5
Q ss_pred EEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEcc---CCCceeeecChhHH
Q psy6613 50 VRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVK---EGSECGFIPSPVKL 110 (510)
Q Consensus 50 VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~---~~~~~GlIPS~~~~ 110 (510)
.||..||.|...+ ..+|+|+.||+++|+++.+++||..|... ..++.|++|+..+.
T Consensus 8 Y~v~aDy~p~~~~-----~~ei~lk~Gd~VeVl~k~~~gwW~vr~~~~~~~~~~eGWVPa~yLe 66 (71)
T 1v1c_A 8 YVVTADYLPLGAE-----QDAITLREGQYVEVLDAAHPLRWLVRTKPTKSSPSRQGWVSPAYLD 66 (71)
T ss_dssp EEESSCBCCCSCC-----TTBCCBCTTCEEEEEEEEETTEEEEEECCCTTCCCCEEEECGGGEE
T ss_pred EEEEecccccCCC-----cceeeecCCCEEEEEEcCCCCEEEEEecCCCCCCCccceecHHHhh
Confidence 5699999653211 13799999999999999999999999963 23689999998764
No 235
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=98.07 E-value=1.8e-05 Score=72.71 Aligned_cols=141 Identities=13% Similarity=0.065 Sum_probs=75.0
Q ss_pred EecCcCChHHHHHHHhc-CCC-CceeeecCCCchh-------------hhh--hhc-------------ccHHHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPS-KRAIMERSNSRSS-------------VLT--EVQ-------------TEIERVYELAS 200 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~-~F~~sVshTTR~p-------------Fe~--~I~-------------TslesI~~vi~ 200 (510)
.|++|+||||+.+.|.+ ... .+... .+|.| |.. .+. ..++.|...+.
T Consensus 15 ~G~~GsGKsT~~~~L~~~l~~~~~~v~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~~l~ 91 (215)
T 1nn5_A 15 EGVDRAGKSTQSRKLVEALCAAGHRAE---LLRFPERSTEIGKLLSSYLQKKSDVEDHSVHLLFSANRWEQVPLIKEKLS 91 (215)
T ss_dssp EESTTSSHHHHHHHHHHHHHHTTCCEE---EEESSCTTSHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHcCCcEE---EeeCCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999886 221 12211 11211 110 000 11235677778
Q ss_pred cCCeEEEEecc---------C-CchhHhh---hcC--CCceEEEEeCCCHHHHHHHHHhcC-CCcHHHHHHHH-HHHHHH
Q psy6613 201 TLQLVVLDCDT---------I-NHPSQLA---KTN--LSPCIVYLKISSPKVLQRLIKSRG-KSQTRHLNVQM-VAAEKL 263 (510)
Q Consensus 201 sGKi~ILDID~---------q-g~~lq~l---ks~--l~PivIFIkPPS~e~L~~rLr~Rg-t~~~e~i~kRL-~aa~eL 263 (510)
+|+.||+|-.. + +.....+ ... ..-++||+..| .+++.+|+..+. .....+...++ .+-.++
T Consensus 92 ~~~~vi~dr~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~d~vi~l~~~-~e~~~~Rl~r~~~~~~~~~~~~~~~~~~~~~ 170 (215)
T 1nn5_A 92 QGVTLVVDRYAFSGVAFTGAKENFSLDWCKQPDVGLPKPDLVLFLQLQ-LADAAKRGAFGHERYENGAFQERALRCFHQL 170 (215)
T ss_dssp TTCEEEEESCHHHHHHHHHTSTTCCHHHHHGGGTTSBCCSEEEEEECC-HHHHHHC-----CTTCSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCcccHHHHHhhcCCCCHHHHHHHHhCCCCCCEEEEEeCC-HHHHHHHhccCccccchHHHHHHHHHHHHHH
Confidence 99999999321 0 1001222 221 12367777765 677888875431 11123445555 333444
Q ss_pred HhcCCCCcc-EEEe-CCCHHHHHHHHHHHHHHHHHh
Q psy6613 264 AQCPQEMFD-VILD-ENQLEDACEHIAEYLEAYWRA 297 (510)
Q Consensus 264 Eq~~~~~FD-~VIv-NDdLd~A~~eL~~ileai~~a 297 (510)
...+ ..+ ++|. |.++++.++++.++++.++..
T Consensus 171 ~~~~--~~~~~~Id~~~~~e~~~~~i~~~l~~~l~~ 204 (215)
T 1nn5_A 171 MKDT--TLNWKMVDASKSIEAVHEDIRVLSEDAIAT 204 (215)
T ss_dssp TTCT--TSCEEEEETTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHhC--CCCEEEEECCCCHHHHHHHHHHHHHHHHhh
Confidence 4333 234 4444 357999999999888877654
No 236
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=98.02 E-value=2e-05 Score=71.48 Aligned_cols=139 Identities=9% Similarity=0.107 Sum_probs=76.5
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCch------h----hhhhh-----------c-ccHHHHHHHHHcCCeEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRS------S----VLTEV-----------Q-TEIERVYELASTLQLVVL 207 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~------p----Fe~~I-----------~-TslesI~~vi~sGKi~IL 207 (510)
+|++|+||||+.+.|.+ ... ..+......|. + +.+.+ . .-.+.|...+..|+.+|+
T Consensus 15 ~G~~GsGKsT~~~~La~~l~~-~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~vi~ 93 (196)
T 2c95_A 15 VGGPGSGKGTQCEKIVQKYGY-THLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLI 93 (196)
T ss_dssp EECTTSSHHHHHHHHHHHHCC-EEEEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTTCSCEEE
T ss_pred ECCCCCCHHHHHHHHHHHhCC-eEEcHHHHHHHHHHcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHHHhccccCCcEEE
Confidence 99999999999999876 321 11211111221 1 00000 0 122344455568999999
Q ss_pred EeccCCchhHhhh---c-CCCc-eEEEEeCCCHHHHHHHHHhcCC------CcHHHHHHHH-HHHHHHH---hcCCCCcc
Q psy6613 208 DCDTINHPSQLAK---T-NLSP-CIVYLKISSPKVLQRLIKSRGK------SQTRHLNVQM-VAAEKLA---QCPQEMFD 272 (510)
Q Consensus 208 DID~qg~~lq~lk---s-~l~P-ivIFIkPPS~e~L~~rLr~Rgt------~~~e~i~kRL-~aa~eLE---q~~~~~FD 272 (510)
|..+.+ ...++ . ...| ++||+.. +.+++.+|+..|+. +..+.+.+|+ ....+.+ ..|.. .|
T Consensus 94 d~~~~~--~~~~~~~~~~~~~~~~vi~l~~-~~e~~~~R~~~R~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~-~~ 169 (196)
T 2c95_A 94 DGYPRE--VQQGEEFERRIGQPTLLLYVDA-GPETMTQRLLKRGETSGRVDDNEETIKKRLETYYKATEPVIAFYEK-RG 169 (196)
T ss_dssp ESCCCS--HHHHHHHHHHTCCCSEEEEEEC-CHHHHHHHHHHHHTSSSCGGGSHHHHHHHHHHHHHHTHHHHHHHHH-HT
T ss_pred eCCCCC--HHHHHHHHHhcCCCCEEEEEEC-CHHHHHHHHHccCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHh-cC
Confidence 986665 33322 2 2234 5566655 67888888877753 2345556666 2222111 11211 23
Q ss_pred --EEEeC-CCHHHHHHHHHHHHHHH
Q psy6613 273 --VILDE-NQLEDACEHIAEYLEAY 294 (510)
Q Consensus 273 --~VIvN-DdLd~A~~eL~~ileai 294 (510)
++|.| .+++++++++..+++.+
T Consensus 170 ~~~~Id~~~~~e~v~~~i~~~l~~~ 194 (196)
T 2c95_A 170 IVRKVNAEGSVDSVFSQVCTHLDAL 194 (196)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHh
Confidence 34544 57899999998777543
No 237
>2f6r_A COA synthase, bifunctional coenzyme A synthase; 18044849, bifunctional coenzyme A synthase (COA synthase), S genomics; HET: ACO UNL; 1.70A {Mus musculus}
Probab=97.95 E-value=6.9e-05 Score=73.96 Aligned_cols=94 Identities=12% Similarity=0.029 Sum_probs=58.2
Q ss_pred HcC-CeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCC
Q psy6613 200 STL-QLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDEN 278 (510)
Q Consensus 200 ~sG-Ki~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvND 278 (510)
..| .+||+|...-. -..+. .+..++|||..| .+++.+|+..|+..+.+++..++......+..+ ...|+||.|+
T Consensus 178 ~~~~~~vIveg~~l~--~~~~~-~~~d~vI~l~a~-~ev~~~Rl~~R~g~s~e~~~~ri~~q~~~~~~~-~~AD~vIdn~ 252 (281)
T 2f6r_A 178 AKGKTLCVIDAAMLL--EAGWQ-SMVHEVWTVVIP-ETEAVRRIVERDGLSEAAAQSRLQSQMSGQQLV-EQSNVVLSTL 252 (281)
T ss_dssp HTTCCEEEEECTTTT--TTTGG-GGCSEEEEEECC-HHHHHHHHHHHHCCCHHHHHHHHHTSCCHHHHH-HTCSEEEECS
T ss_pred ccCCCEEEEEechhh--ccchH-HhCCEEEEEcCC-HHHHHHHHHHcCCCCHHHHHHHHHHcCChHhhH-hhCCEEEECC
Confidence 344 68999976432 11111 223578999887 677777777664344566666662211111111 2469999987
Q ss_pred -CHHHHHHHHHHHHHHHHHhc
Q psy6613 279 -QLEDACEHIAEYLEAYWRAT 298 (510)
Q Consensus 279 -dLd~A~~eL~~ileai~~a~ 298 (510)
+++++++++..++..+....
T Consensus 253 ~s~eel~~~I~~~l~~l~~~~ 273 (281)
T 2f6r_A 253 WESHVTQSQVEKAWNLLQKRL 273 (281)
T ss_dssp SCHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 79999999998888776443
No 238
>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A
Probab=97.92 E-value=9.1e-06 Score=69.61 Aligned_cols=54 Identities=22% Similarity=0.394 Sum_probs=43.0
Q ss_pred CeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecC--CCceEEEEccCCCceeeecChhH
Q psy6613 46 VAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYD--SNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 46 ~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d--~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
+.-.++|+++..+..+ .|+|++|++|+|+.+.+ ++||.+|+ ..|..|+||.+..
T Consensus 27 vl~~a~a~~~~k~g~~--------dLp~~~GE~LeII~~~e~p~g~Wl~RN--~~G~~GyVp~~~v 82 (96)
T 2gtj_A 27 VIHLAKACCDVKGGKN--------ELSFKQGEQIEIIRITDNPEGKWLGRT--ARGSYGYIKTTAV 82 (96)
T ss_dssp CCEEEEESSCEECTTS--------CCEECTTCCEEEEECTTCSSSCCEEEC--TTCCBCCCCGGGE
T ss_pred eEEEEEEeecCCCCcc--------cCCcCCCCEEEEEEccCCCCCeEEEEC--CCCCCCccchhhE
Confidence 4446899998444332 48899999999999976 56999998 4679999998874
No 239
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=97.91 E-value=1.5e-05 Score=71.09 Aligned_cols=131 Identities=12% Similarity=0.072 Sum_probs=66.5
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhh---------------hhhc-ccHHHHHHHH---HcCCeEEEEec
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVL---------------TEVQ-TEIERVYELA---STLQLVVLDCD 210 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe---------------~~I~-TslesI~~vi---~sGKi~ILDID 210 (510)
+||+|+||||+.+.|.+ ... +.+.-..+.|.... ..+. ...+.+...+ ..|+.+|+|..
T Consensus 8 ~G~~GsGKST~a~~L~~~~~~-~~~i~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~vi~d~~ 86 (181)
T 1ly1_A 8 IGCPGSGKSTWAREFIAKNPG-FYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVIISDT 86 (181)
T ss_dssp ECCTTSSHHHHHHHHHHHSTT-EEEECHHHHHHHHTTSCCGGGCCCCHHHHHHHHHHHHHHHHHHHTSCSSCCEEEECSC
T ss_pred ecCCCCCHHHHHHHHHhhcCC-cEEecHHHHHHHhhCCCccchhhhchhhhhHHHHHHHHHHHHHHhhccCCCeEEEeCC
Confidence 89999999999999987 443 22221222222210 0011 2335567777 88999999987
Q ss_pred cCCch-hHhhh----c-CCCceEEEEeCCCHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHhcCCCCccEEEeCCCH-H
Q psy6613 211 TINHP-SQLAK----T-NLSPCIVYLKISSPKVLQRLIKSRG--KSQTRHLNVQMVAAEKLAQCPQEMFDVILDENQL-E 281 (510)
Q Consensus 211 ~qg~~-lq~lk----s-~l~PivIFIkPPS~e~L~~rLr~Rg--t~~~e~i~kRL~aa~eLEq~~~~~FD~VIvNDdL-d 281 (510)
..+.. .+.++ . ....++||+. .+.+++.+|+..|+ ..+.+.+.+++..-++.. .+|..++|+++ +
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~~~i~l~-~~~~~~~~R~~~R~~~~~~~~~i~~~~~~~~~~~-----~~~~~~id~~~~~ 160 (181)
T 1ly1_A 87 NLNPERRLAWETFAKEYGWKVEHKVFD-VPWTELVKRNSKRGTKAVPIDVLRSMYKSMREYL-----GLPVYNGTPGKPK 160 (181)
T ss_dssp CCSHHHHHHHHHHHHHHTCEEEEEECC-CCHHHHHHHHTTCGGGCCCHHHHHHHHHHHHHHH-----TCCCC--------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEe-CCHHHHHHHHhccccCCCCHHHHHHHHHHhhccC-----CCCccccCCCCCc
Confidence 75510 11122 1 2333678887 47899999998887 333444444444444332 23322256666 4
Q ss_pred HHHHHHH
Q psy6613 282 DACEHIA 288 (510)
Q Consensus 282 ~A~~eL~ 288 (510)
..+..+.
T Consensus 161 ~v~~~i~ 167 (181)
T 1ly1_A 161 AVIFDVD 167 (181)
T ss_dssp -------
T ss_pred eeeehhh
Confidence 4444444
No 240
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}
Probab=97.90 E-value=1.5e-06 Score=87.29 Aligned_cols=57 Identities=9% Similarity=0.081 Sum_probs=0.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLE 111 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~E 111 (510)
..++||+|||.+..++ +.+|+|++||+|.|+++.+++||.|+. +|+.|+||+...+.
T Consensus 247 ~~~a~alyd~~~~~~~-----~~ELs~~~Gd~i~v~~~~~~~ww~g~~---~g~~G~fP~~yv~~ 303 (308)
T 3qwy_A 247 PAKAKVTFDRVPNAYD-----PTQLRVKKGQTVLVTQKMSNGMYKAEL---DGQIGSVPHTYLRF 303 (308)
T ss_dssp -----------------------------------------------------------------
T ss_pred ccccccccccccccCC-----cccceeCCCCEEEEEEEcCCCcEEEEE---CCeeEEechHHeEE
Confidence 4578999999765432 237999999999999998899999887 57899999987654
No 241
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=97.90 E-value=3.2e-05 Score=69.54 Aligned_cols=91 Identities=14% Similarity=0.170 Sum_probs=47.6
Q ss_pred cCCeEEEEeccC-----Cc----hhHhhhcCCCceEEEEeCCCHHHHHHHHHh--cCC--CcHHHHHHHHHHH---HHHH
Q psy6613 201 TLQLVVLDCDTI-----NH----PSQLAKTNLSPCIVYLKISSPKVLQRLIKS--RGK--SQTRHLNVQMVAA---EKLA 264 (510)
Q Consensus 201 sGKi~ILDID~q-----g~----~lq~lks~l~PivIFIkPPS~e~L~~rLr~--Rgt--~~~e~i~kRL~aa---~eLE 264 (510)
.+..||+|.... +. +...++.....++|||.+|.-..+++|+.. |+. ...+.+..+.... .+..
T Consensus 83 ~~~~viid~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~rRl~~~~R~r~~~~~~~~~~~~~~~~~~~~~~ 162 (192)
T 1kht_A 83 KESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSY 162 (192)
T ss_dssp TTSCEEEECCSEEEETTEEEESSCHHHHHHHCCSEEEEEECCHHHHHHHHHTSSSCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEccceeccccccccccCcHHHHhccCCCEEEEEeCCHHHHHHHHhhhcccCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 566888886431 10 003333311246888888754444458866 543 3333333232111 1111
Q ss_pred hcCCCCccEEEeCCC--HHHHHHHHHHHH
Q psy6613 265 QCPQEMFDVILDENQ--LEDACEHIAEYL 291 (510)
Q Consensus 265 q~~~~~FD~VIvNDd--Ld~A~~eL~~il 291 (510)
..|....+++|.|.+ ++++++++.++|
T Consensus 163 ~~~~~~~~~~i~~~~~~~e~~~~~i~~~i 191 (192)
T 1kht_A 163 GVLTGATVKIVQNRNGLLDQAVEELTNVL 191 (192)
T ss_dssp HHHHCCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 122234456667888 999999988654
No 242
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=97.89 E-value=1.2e-05 Score=72.59 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=70.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeec------CCC-chhhhhh---hc--ccHHHHHHHHHcCCeEEEEecc---CC-
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMER------SNS-RSSVLTE---VQ--TEIERVYELASTLQLVVLDCDT---IN- 213 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVs------hTT-R~pFe~~---I~--TslesI~~vi~sGKi~ILDID~---qg- 213 (510)
+||+|+||||+.+.|.+ ..-.|.-.-. ..+ ...|+.. .. ...+.+..+... ..+|+.+.. ..
T Consensus 11 ~G~~GsGKst~a~~La~~l~~~~i~~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~vi~~gg~~~~~~ 89 (185)
T 3trf_A 11 IGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKL-DNIILATGGGVVLDE 89 (185)
T ss_dssp ECSTTSSHHHHHHHHHHHHCCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHS-SSCEEECCTTGGGSH
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEChHHHHHHcCCChhhHHHHhCHHHHHHHHHHHHHHHHhc-CCcEEecCCceecCH
Confidence 99999999999999876 2211211100 000 0001110 00 122334554444 445555531 11
Q ss_pred chhHhhhcCCCceEEEEeCCCHHHHHHHH--Hh---cCCCcHHHHHHHH-HHHHHHHhcCCCCccEEEeCCC--HHHHHH
Q psy6613 214 HPSQLAKTNLSPCIVYLKISSPKVLQRLI--KS---RGKSQTRHLNVQM-VAAEKLAQCPQEMFDVILDENQ--LEDACE 285 (510)
Q Consensus 214 ~~lq~lks~l~PivIFIkPPS~e~L~~rL--r~---Rgt~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvNDd--Ld~A~~ 285 (510)
...+.++. ..++||+.+| .+++.+|+ +. |+.........++ ..-.+-+..|...+|++|.+++ ++++++
T Consensus 90 ~~~~~l~~--~~~vi~L~~~-~e~l~~Rl~~~~~~~rp~~~~~~~~~~l~~~~~~r~~~y~~~ad~~Idt~~~~~~e~~~ 166 (185)
T 3trf_A 90 KNRQQISE--TGVVIYLTAS-IDTQLKRIGQKGEMRRPLFIKNNSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLAT 166 (185)
T ss_dssp HHHHHHHH--HEEEEEEECC-HHHHHHHHHCCTTCSSCCCCCHHHHHHHHHHHHHHHHHHHHHCSEEEECTTCCHHHHHH
T ss_pred HHHHHHHh--CCcEEEEECC-HHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCCEEEECCCCCHHHHHH
Confidence 00122222 2377888775 88999999 33 3333333223333 1111111222245799999876 899988
Q ss_pred HHHHHHHH
Q psy6613 286 HIAEYLEA 293 (510)
Q Consensus 286 eL~~ilea 293 (510)
++.+++..
T Consensus 167 ~I~~~l~~ 174 (185)
T 3trf_A 167 QILVDIKQ 174 (185)
T ss_dssp HHHHHSCC
T ss_pred HHHHHHHH
Confidence 88866543
No 243
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=97.88 E-value=0.0002 Score=64.14 Aligned_cols=136 Identities=15% Similarity=0.199 Sum_probs=72.4
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCC-Cch------h----hhh-hh---cccHH-HHHHHHHcCCeEEEEeccCC
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSN-SRS------S----VLT-EV---QTEIE-RVYELASTLQLVVLDCDTIN 213 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshT-TR~------p----Fe~-~I---~Tsle-sI~~vi~sGKi~ILDID~qg 213 (510)
+||+|+||||+.+.|.. .. +.+.-... .+. . +.. .. .+.++ .+..++..|..+|+|...-.
T Consensus 14 ~G~~GsGKSTl~~~l~~~~g--~~~i~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 91 (175)
T 1knq_A 14 MGVSGSGKSAVASEVAHQLH--AAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALNDAAFAMQRTNKVSLIVCSALK 91 (175)
T ss_dssp ECSTTSCHHHHHHHHHHHHT--CEEEEGGGGCCHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHCSEEEEECCCCS
T ss_pred EcCCCCCHHHHHHHHHHhhC--cEEEeCccccchHHHHHhhcCcCCCccccccHHHHHHHHHHHHHhcCCcEEEEeCchH
Confidence 99999999999998865 21 11111111 010 0 000 00 02222 23445567999999975322
Q ss_pred -chhHhhhcCC-CceEEEEeCCCHHHHHHHHHhcCCCcH-HHHHHHHHHHHHHHhc-CCCCccEEEeCC-CHHHHHHHHH
Q psy6613 214 -HPSQLAKTNL-SPCIVYLKISSPKVLQRLIKSRGKSQT-RHLNVQMVAAEKLAQC-PQEMFDVILDEN-QLEDACEHIA 288 (510)
Q Consensus 214 -~~lq~lks~l-~PivIFIkPPS~e~L~~rLr~Rgt~~~-e~i~kRL~aa~eLEq~-~~~~FD~VIvND-dLd~A~~eL~ 288 (510)
...+.++... ..++||+.. +.+++.+|+..|+.... ..... .....++.. |....|++|.|+ ++++..+++.
T Consensus 92 ~~~~~~l~~~~~~~~vv~l~~-~~e~~~~R~~~R~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Id~~~~~~~~~~~i~ 168 (175)
T 1knq_A 92 KHYRDLLREGNPNLSFIYLKG-DFDVIESRLKARKGHFFKTQMLV--TQFETLQEPGADETDVLVVDIDQPLEGVVASTI 168 (175)
T ss_dssp HHHHHHHHTTCTTEEEEEEEC-CHHHHHHHHHTSTTCCCCHHHHH--HHHHHCCCCCTTCTTEEEEECSSCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEEEC-CHHHHHHHHHhccCCCCchHHHH--HHHHhhhCcccCCCCeEEEeCCCCHHHHHHHHH
Confidence 0123333322 337888886 57899999988864321 11111 111122222 344568888775 5777777777
Q ss_pred HHH
Q psy6613 289 EYL 291 (510)
Q Consensus 289 ~il 291 (510)
+++
T Consensus 169 ~~l 171 (175)
T 1knq_A 169 EVI 171 (175)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 244
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=97.87 E-value=5.5e-05 Score=67.88 Aligned_cols=139 Identities=7% Similarity=0.100 Sum_probs=73.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------------hhhhhc----ccHHHHHHHHH--cCCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------------VLTEVQ----TEIERVYELAS--TLQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------------Fe~~I~----TslesI~~vi~--sGKi~ILDI 209 (510)
+|++|+||||+.+.|.+ .. ...+......|.. |..... .....+.+.+. .|+.+|+|-
T Consensus 12 ~G~~GsGKsT~~~~L~~~l~-~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~l~~~i~~~~~~~vi~d~ 90 (194)
T 1qf9_A 12 LGGPGSGKGTQCANIVRDFG-WVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDANQGKNFLVDG 90 (194)
T ss_dssp EESTTSSHHHHHHHHHHHHC-CEEEEHHHHHHHHHHTTCTTHHHHHHHHHTTCCCCHHHHHHHHHHHHHTSTTCCEEEET
T ss_pred ECCCCCCHHHHHHHHHHHhC-CeEeeHHHHHHHHHhcCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHhcCCCCEEEeC
Confidence 89999999999999876 33 2222221122211 110000 11233344443 688999997
Q ss_pred ccCCch-hHhh----hcCCCc-eEEEEeCCCHHHHHHHHHhcCC------CcHHHHHHHHHH-HH---HHHhcCCCCcc-
Q psy6613 210 DTINHP-SQLA----KTNLSP-CIVYLKISSPKVLQRLIKSRGK------SQTRHLNVQMVA-AE---KLAQCPQEMFD- 272 (510)
Q Consensus 210 D~qg~~-lq~l----ks~l~P-ivIFIkPPS~e~L~~rLr~Rgt------~~~e~i~kRL~a-a~---eLEq~~~~~FD- 272 (510)
.+.... .+.+ +....| ++|||. .+.+++.+|+..|+. +..+.+.+|+.. .. .+...| ..+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~vi~l~-~~~e~~~~R~~~R~~~~~r~~~~~~~~~~ri~~~~~~~~~~~~~~-~~~~~ 168 (194)
T 1qf9_A 91 FPRNEENNNSWEENMKDFVDTKFVLFFD-CPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHY-NKFDK 168 (194)
T ss_dssp CCCSHHHHHHHHHHHTTTCEEEEEEEEE-CCHHHHHHHHHHHHTTSCCTTCSHHHHHHHHHHHHHTHHHHHHHH-HHTTC
T ss_pred cCCCHHHHHHHHHHHhccCCCCEEEEEE-CCHHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhHHHHHHHH-HhCCC
Confidence 655400 1122 112234 345555 568888888877643 224566677732 21 111122 1245
Q ss_pred -EEEeC-CCHHHHHHHHHHHHH
Q psy6613 273 -VILDE-NQLEDACEHIAEYLE 292 (510)
Q Consensus 273 -~VIvN-DdLd~A~~eL~~ile 292 (510)
++|.| .++++.++++.++++
T Consensus 169 ~~~id~~~~~~~~~~~i~~~l~ 190 (194)
T 1qf9_A 169 VKIIPANRDVNEVYNDVENLFK 190 (194)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHH
Confidence 55655 478888888886664
No 245
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=7e-05 Score=69.23 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=74.5
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecC-CCc------hhhhhh----hc-ccHHHHHHHHHcCCeEEEEeccCC----
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERS-NSR------SSVLTE----VQ-TEIERVYELASTLQLVVLDCDTIN---- 213 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVsh-TTR------~pFe~~----I~-TslesI~~vi~sGKi~ILDID~qg---- 213 (510)
+||+|+||||+.+.|.+ ..-.|.-.-.. ..+ ..|... .. ...+.+..+ ..+..+|+++..-.
T Consensus 31 ~G~~GsGKsTl~~~La~~l~~~~i~~d~~~~~~~g~~i~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~vi~~ggg~~~~~ 109 (199)
T 3vaa_A 31 TGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTERGEAGFRELERNMLHEV-AEFENVVISTGGGAPCFY 109 (199)
T ss_dssp ECCTTSCHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH-TTCSSEEEECCTTGGGST
T ss_pred EcCCCCCHHHHHHHHHHHcCCCEEcchHHHHHHhCCcHHHHHHhcChHHHHHHHHHHHHHH-hhcCCcEEECCCcEEccH
Confidence 99999999999999886 32112110000 000 001110 00 122233333 35677788853211
Q ss_pred chhHhhhcCCCceEEEEeCCCHHHHHHHHH-hc---C---CCcHHHHHHHH-HHHHHHHhcCCCCccEEEeCCC--HHHH
Q psy6613 214 HPSQLAKTNLSPCIVYLKISSPKVLQRLIK-SR---G---KSQTRHLNVQM-VAAEKLAQCPQEMFDVILDENQ--LEDA 283 (510)
Q Consensus 214 ~~lq~lks~l~PivIFIkPPS~e~L~~rLr-~R---g---t~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvNDd--Ld~A 283 (510)
...+.++. ..++||+.. +.+++.+|+. .+ . ....+++..++ ..-.+.+..|.. .|++|.+++ .+++
T Consensus 110 ~~~~~l~~--~~~vi~L~~-~~e~l~~Rl~~~~~~Rp~~~~~~~~~~~~~i~~~~~~r~~~y~~-ad~~Idt~~~s~ee~ 185 (199)
T 3vaa_A 110 DNMEFMNR--TGKTVFLNV-HPDVLFRRLRIAKQQRPILQGKEDDELMDFIIQALEKRAPFYTQ-AQYIFNADELEDRWQ 185 (199)
T ss_dssp THHHHHHH--HSEEEEEEC-CHHHHHHHHHHTGGGCGGGTTCCHHHHHHHHHHHHHHHHHHHTT-SSEEEECCCCSSHHH
T ss_pred HHHHHHHc--CCEEEEEEC-CHHHHHHHHhcCCCCCCCcCCCChhhHHHHHHHHHHHHHHHHhh-CCEEEECCCCCHHHH
Confidence 00112221 346777765 5788888887 33 1 22333444444 222223333444 899998875 8999
Q ss_pred HHHHHHHHHHHH
Q psy6613 284 CEHIAEYLEAYW 295 (510)
Q Consensus 284 ~~eL~~ileai~ 295 (510)
++++.++|+.++
T Consensus 186 ~~~I~~~l~~~l 197 (199)
T 3vaa_A 186 IESSVQRLQELL 197 (199)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999998887664
No 246
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=97.85 E-value=0.0001 Score=66.56 Aligned_cols=91 Identities=12% Similarity=0.106 Sum_probs=51.2
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--h-------hhhhc---ccHHHHHHHHHcCCeEEEEeccCCchhH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--V-------LTEVQ---TEIERVYELASTLQLVVLDCDTINHPSQ 217 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--F-------e~~I~---TslesI~~vi~sGKi~ILDID~qg~~lq 217 (510)
+|++|+||||+.+.|.+ ..- ..+......+.. | ...+. .-++.+..++..|..+| |.. + ..
T Consensus 17 ~G~~GsGKst~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vv-~~~--~--~~ 90 (180)
T 3iij_A 17 TGTPGVGKTTLGKELASKSGL-KYINVGDLAREEQLYDGYDEEYDCPILDEDRVVDELDNQMREGGVIV-DYH--G--CD 90 (180)
T ss_dssp ECSTTSSHHHHHHHHHHHHCC-EEEEHHHHHHHHTCEEEEETTTTEEEECHHHHHHHHHHHHHHCCEEE-ECS--C--CT
T ss_pred EeCCCCCHHHHHHHHHHHhCC-eEEEHHHHHhhcchhhhhhhhhcCccCChHHHHHHHHHHHhcCCEEE-Eec--h--hh
Confidence 99999999999998876 221 111111111111 0 00000 13455666777886653 433 3 23
Q ss_pred hhhcCCCceEEEEeCCCHHHHHHHHHhcCCC
Q psy6613 218 LAKTNLSPCIVYLKISSPKVLQRLIKSRGKS 248 (510)
Q Consensus 218 ~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~ 248 (510)
.+......++||+.+ +.+++.+|+..|+..
T Consensus 91 ~~~~~~~~~vi~L~~-~~e~l~~R~~~r~~~ 120 (180)
T 3iij_A 91 FFPERWFHIVFVLRT-DTNVLYERLETRGYN 120 (180)
T ss_dssp TSCGGGCSEEEEEEC-CHHHHHHHHHHTTCC
T ss_pred hcchhcCCEEEEEEC-CHHHHHHHHHHcCCC
Confidence 333322346666655 689999999998754
No 247
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=97.83 E-value=6.1e-05 Score=68.37 Aligned_cols=141 Identities=8% Similarity=-0.007 Sum_probs=74.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCch-h-------------hhh-------hhc-ccHHHHHHHHHcCCeEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRS-S-------------VLT-------EVQ-TEIERVYELASTLQLVVL 207 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~-p-------------Fe~-------~I~-TslesI~~vi~sGKi~IL 207 (510)
+|++|+||||+.+.|.+ .. ...+......|. + |.. .+. .-.+.|...+..|..+|+
T Consensus 18 ~G~~GsGKsT~a~~L~~~l~-~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~vi~ 96 (199)
T 2bwj_A 18 IGGPGSGKGTQCEKLVEKYG-FTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLI 96 (199)
T ss_dssp EECTTSSHHHHHHHHHHHHT-CEEEEHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTSCSCEEE
T ss_pred ECCCCCCHHHHHHHHHHHhC-CeEEcHHHHHHHHHHhCCHHHHHHHHHHHcCCcCCHHHHHHHHHHHHhcccccCccEEE
Confidence 99999999999999887 32 111111111111 0 100 000 111223333447899999
Q ss_pred EeccCCc-hhHhhhcC--CCceEEEEeCCCHHHHHHHHHhcCCC------cHHHHHHHH-HHHHHHH---hcCCCCcc--
Q psy6613 208 DCDTINH-PSQLAKTN--LSPCIVYLKISSPKVLQRLIKSRGKS------QTRHLNVQM-VAAEKLA---QCPQEMFD-- 272 (510)
Q Consensus 208 DID~qg~-~lq~lks~--l~PivIFIkPPS~e~L~~rLr~Rgt~------~~e~i~kRL-~aa~eLE---q~~~~~FD-- 272 (510)
|--+... ....+... ..-++|||..| .+++.+|+..|+.. ..+.+.+|+ ..-.+.+ ..|. ..+
T Consensus 97 dg~~~~~~~~~~l~~~~~~~~~~i~l~~~-~~~~~~R~~~R~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~ 174 (199)
T 2bwj_A 97 DGYPREVKQGEEFGRRIGDPQLVICMDCS-ADTMTNRLLQMSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYE-TKTQL 174 (199)
T ss_dssp ETCCSSHHHHHHHHHHTCCCSEEEEEECC-HHHHHHHHHHTCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHSEE
T ss_pred eCCCCCHHHHHHHHHhcCCCCEEEEEECC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-hcCCE
Confidence 9544330 01122222 23378888874 78888999888652 123455555 2222221 1121 123
Q ss_pred EEEeC-CCHHHHHHHHHHHHHHH
Q psy6613 273 VILDE-NQLEDACEHIAEYLEAY 294 (510)
Q Consensus 273 ~VIvN-DdLd~A~~eL~~ileai 294 (510)
++|.| .+++++++++.++++.+
T Consensus 175 ~~id~~~~~e~v~~~i~~~l~~~ 197 (199)
T 2bwj_A 175 HKINAEGTPEDVFLQLCTAIDSI 197 (199)
T ss_dssp EEEETTSCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHHHh
Confidence 44443 36899999998777543
No 248
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=97.82 E-value=0.00023 Score=65.46 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=77.8
Q ss_pred CCCCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh----------hhhhhc----ccH----HHHHHHH---
Q psy6613 144 PSPGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----------VLTEVQ----TEI----ERVYELA--- 199 (510)
Q Consensus 144 Ps~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----------Fe~~I~----Tsl----esI~~vi--- 199 (510)
+..+.+| +|++|+||||+.+.|.+ ... ..+......|.. +.+.+. ... ..+.+.+
T Consensus 17 ~~~~~~I~l~G~~GsGKST~a~~La~~l~~-~~i~~d~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~~~ 95 (201)
T 2cdn_A 17 RGSHMRVLLLGPPGAGKGTQAVKLAEKLGI-PQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNP 95 (201)
T ss_dssp CCSCCEEEEECCTTSSHHHHHHHHHHHHTC-CEEEHHHHHHHHHHTTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSG
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHhCC-cEEehhHHHHHHHHcCChHHHHHHHHHHcCCcccHHHHHHHHHHHHhcc
Confidence 3344444 89999999999999887 321 122222222321 000000 111 2222222
Q ss_pred HcCCeEEEEeccCCchh------Hhhhc-CCCc-eEEEEeCCCHHHHHHHHHhcCC--CcHHHHHHHHHHHH-H---HHh
Q psy6613 200 STLQLVVLDCDTINHPS------QLAKT-NLSP-CIVYLKISSPKVLQRLIKSRGK--SQTRHLNVQMVAAE-K---LAQ 265 (510)
Q Consensus 200 ~sGKi~ILDID~qg~~l------q~lks-~l~P-ivIFIkPPS~e~L~~rLr~Rgt--~~~e~i~kRL~aa~-e---LEq 265 (510)
..|..+|+|..+.+ .. +.++. ...| ++||+..| .+++.+|+..|+. +..+.+.+|+..-. + +..
T Consensus 96 ~~~~~vIldg~~~~-~~~~~~l~~~l~~~~~~~~~vi~l~~~-~e~~~~Rl~~R~r~~~~~e~~~~r~~~~~~~~~~~~~ 173 (201)
T 2cdn_A 96 DAANGFILDGYPRS-VEQAKALHEMLERRGTDIDAVLEFRVS-EEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLE 173 (201)
T ss_dssp GGTTCEEEESCCCS-HHHHHHHHHHHHHTTCCCCEEEEEECC-HHHHHHHHHHHCCTTCSHHHHHHHHHHHHHHTTTHHH
T ss_pred cCCCeEEEECCCCC-HHHHHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhHHHHH
Confidence 24778999976654 11 12222 2334 67777764 6788888887753 34555666663222 2 223
Q ss_pred cCCCCccEEEeCC-CHHHHHHHHHHHH
Q psy6613 266 CPQEMFDVILDEN-QLEDACEHIAEYL 291 (510)
Q Consensus 266 ~~~~~FD~VIvND-dLd~A~~eL~~il 291 (510)
.| ...+++|.|+ ++++.++++.++|
T Consensus 174 ~~-~~~~~~Id~~~~~eev~~~I~~~l 199 (201)
T 2cdn_A 174 YY-RDQLKTVDAVGTMDEVFARALRAL 199 (201)
T ss_dssp HT-TTTEEEEECCSCHHHHHHHHHHHT
T ss_pred Hh-cCcEEEEeCCCCHHHHHHHHHHHH
Confidence 33 3457777664 6888888887544
No 249
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=97.76 E-value=2.2e-05 Score=87.01 Aligned_cols=65 Identities=17% Similarity=0.166 Sum_probs=48.5
Q ss_pred HHHHHHHhhhccCCCeeEEEEeeccCCC--CCCCCCCCCccccccCCceEEEEee-----cCCCceEEEEccCCCceeee
Q psy6613 32 RQALSQLEKARAKNVAFAVRTNVKYDGS--IDDDSPVHGYAVSFDIHEFLHIKEK-----YDSNWWIGRLVKEGSECGFI 104 (510)
Q Consensus 32 ~~a~~~L~~a~~k~~~~~VRAlfdY~~~--~D~~iPc~e~~LsF~~GDiL~V~~~-----~d~~WWqar~v~~~~~~GlI 104 (510)
......|.+ .+.|++|+|||... +| ...|+|++||+|.+++. .+++||.|++.. +|+.|+|
T Consensus 563 ~~yi~~Lk~-----rs~~~~Al~d~~~~~~~~------~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~-~g~~G~f 630 (655)
T 3pvl_A 563 VTFLEGLRK-----RSKYVVALQDNPNPAGEE------SGFLSFAKGDLIILDHDTGEQVMNSGWANGINER-TKQRGDF 630 (655)
T ss_dssp HHHHHHHHH-----HCCEEEESSCCCC-----------CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETT-TCCEEEE
T ss_pred HHHHHHHhh-----cchhhhHHhhcccCCCCC------CCcccccCCCEEEEccccCcccCCCCeEEEEeCC-CCceEEe
Confidence 344455544 36799999999832 22 24699999999999998 578999999743 5799999
Q ss_pred cChh
Q psy6613 105 PSPV 108 (510)
Q Consensus 105 PS~~ 108 (510)
|+..
T Consensus 631 P~~~ 634 (655)
T 3pvl_A 631 PTDC 634 (655)
T ss_dssp EGGG
T ss_pred Ehhh
Confidence 9764
No 250
>3lv8_A DTMP kinase, thymidylate kinase; structural genomics, in diseases, center for structural genomics of infectious DISE ATP-binding; HET: ADP TMP TYD; 1.80A {Vibrio cholerae o1 biovar eltor} PDB: 3n2i_A*
Probab=97.75 E-value=7.3e-05 Score=72.83 Aligned_cols=147 Identities=18% Similarity=0.166 Sum_probs=84.1
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------hhhh---------hc-------------cc-
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------VLTE---------VQ-------------TE- 191 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------Fe~~---------I~-------------Ts- 191 (510)
.+.+| .|++|+||||+.+.|.+ .. ..++.+..+||.| +.+. +. ..
T Consensus 26 ~~~~i~~eG~~GsGKsT~~~~l~~~l~-~~~~~~~~~~rep~~t~~g~~ir~~l~~~~~~~~~~~~~e~lLf~A~R~~~~ 104 (236)
T 3lv8_A 26 NAKFIVIEGLEGAGKSTAIQVVVETLQ-QNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQDITELLLVYAARVQLV 104 (236)
T ss_dssp CCCEEEEEESTTSCHHHHHHHHHHHHH-HTTCCCEEEEESSCSSHHHHHHHHHHHSCCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHH-hcCCCeeeeecCCCCCHHHHHHHHHHhhCCCcccCCHHHHHHHHHHHHHHHH
Confidence 45555 89999999999999877 22 1223323456655 1111 10 11
Q ss_pred HHHHHHHHHcCCeEEEE------eccCCch----hHh---hhc----CCCc-eEEEEeCCCHHHHHHHHHhcCC-Cc---
Q psy6613 192 IERVYELASTLQLVVLD------CDTINHP----SQL---AKT----NLSP-CIVYLKISSPKVLQRLIKSRGK-SQ--- 249 (510)
Q Consensus 192 lesI~~vi~sGKi~ILD------ID~qg~~----lq~---lks----~l~P-ivIFIkPPS~e~L~~rLr~Rgt-~~--- 249 (510)
.+.|...+++|++||+| +-.|+.. .+. +.. .+.| .+||+..| .+++.+|+..|+. +.
T Consensus 105 ~~~I~paL~~g~~VI~DRy~~S~~AYq~~~rgl~~~~i~~l~~~~~~~~~PDlvi~Ldv~-~e~~~~Ri~~R~~~dr~E~ 183 (236)
T 3lv8_A 105 ENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTALGDFKPDLTLYLDID-PKLGLERARGRGELDRIEK 183 (236)
T ss_dssp HHTHHHHHHTTCEEEEESCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECC-HHHHHHC-----CCCTTTT
T ss_pred HHHHHHHHHcCCEEEEeeecchHHhhhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCC-HHHHHHHHHhcCCcchhhh
Confidence 23466677899999999 4444410 111 111 2455 45666655 6889999888863 11
Q ss_pred -HHHHHHHH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHHH
Q psy6613 250 -TRHLNVQM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 250 -~e~i~kRL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~~ 296 (510)
..+...|+ ++-.++...++. ..+|. +.++++..+++.++|+.++.
T Consensus 184 ~~~~~~~rv~~~y~~la~~~~~--~~vIDa~~sieeV~~~I~~~l~~~l~ 231 (236)
T 3lv8_A 184 MDISFFERARERYLELANSDDS--VVMIDAAQSIEQVTADIRRALQDWLS 231 (236)
T ss_dssp SCHHHHHHHHHHHHHHHHHCTT--EEEEETTSCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHCCC--EEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 13556667 444566665544 34443 47799999999988877653
No 251
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=97.74 E-value=0.00033 Score=63.89 Aligned_cols=139 Identities=13% Similarity=0.098 Sum_probs=74.9
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------hhhh-----hc--------------ccHHHHHHHHHcC
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------VLTE-----VQ--------------TEIERVYELASTL 202 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------Fe~~-----I~--------------TslesI~~vi~sG 202 (510)
.|++|+||||+.+.|.+ ......+ + .++.| +... .. .-.+.|...+..|
T Consensus 10 ~G~~GsGKsT~~~~L~~~l~~~g~~-~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~i~~~l~~g 86 (213)
T 2plr_A 10 EGIDGSGKSSQATLLKDWIELKRDV-Y--LTEWNSSDWIHDIIKEAKKKDLLTPLTFSLIHATDFSDRYERYILPMLKSG 86 (213)
T ss_dssp ECCTTSSHHHHHHHHHHHHTTTSCE-E--EEETTCCCHHHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTHHHHHHTT
T ss_pred EcCCCCCHHHHHHHHHHHHhhcCCE-E--EecCCcHHHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 89999999999999987 3321111 1 11221 1110 00 0012234556789
Q ss_pred CeEEEEeccCCch------------hHhhhc-CCCc-eEEEEeCCCHHHHHHHHH-hcCC-Cc-------------H---
Q psy6613 203 QLVVLDCDTINHP------------SQLAKT-NLSP-CIVYLKISSPKVLQRLIK-SRGK-SQ-------------T--- 250 (510)
Q Consensus 203 Ki~ILDID~qg~~------------lq~lks-~l~P-ivIFIkPPS~e~L~~rLr-~Rgt-~~-------------~--- 250 (510)
+.||+|-.+..+. +..+.. ...| ++||+..| .+++.+|+. .|+. +. .
T Consensus 87 ~~vi~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vi~l~~~-~e~~~~Rl~~~R~~~~~~~~g~~~~~~~d~~e~~ 165 (213)
T 2plr_A 87 FIVISDRYIYTAYARDSVRGVDIDWVKKLYSFAIKPDITFYIRVS-PDIALERIKKSKRKIKPQEAGADIFPGLSPEEGF 165 (213)
T ss_dssp CEEEEESCHHHHHHHHHTTTCCHHHHHHHTTTSCCCSEEEEEECC-HHHHHHHHHHTTCCCCTTTTTTTTCTTSCHHHHH
T ss_pred CEEEEeCcHhHHHHHHHhhCCCHHHHHHHHhcCCCCCEEEEEeCC-HHHHHHHHhcccccccccccccccccccchhhhH
Confidence 9999997542200 111222 1123 56777764 688888888 7763 11 1
Q ss_pred HHHHHHH-HHHHHHHhcCCCCccEEEeC-CCHHHHHHHHHHHHHHHHH
Q psy6613 251 RHLNVQM-VAAEKLAQCPQEMFDVILDE-NQLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 251 e~i~kRL-~aa~eLEq~~~~~FD~VIvN-DdLd~A~~eL~~ileai~~ 296 (510)
+...+++ ..-.++... .-+++|.+ .++++.++++.++|..++.
T Consensus 166 ~~~~~r~~~~~~~~~~~---~~~~~Id~~~~~e~v~~~I~~~l~~~~~ 210 (213)
T 2plr_A 166 LKYQGLITEVYDKLVKD---ENFIVIDGTKTPKEIQIQIRKFVGELID 210 (213)
T ss_dssp HHHHHHHHHHHHHHTTT---TTCEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh---CCEEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 2334444 222233222 23466654 3688889999888776554
No 252
>4edh_A DTMP kinase, thymidylate kinase; structural genomics, PSI-biology; HET: TMP ADP; 1.32A {Pseudomonas aeruginosa PAO1} PDB: 4e5u_A* 4esh_A* 4gmd_A* 3uwk_A* 3uwo_A* 3uxm_A*
Probab=97.73 E-value=0.00012 Score=69.88 Aligned_cols=146 Identities=15% Similarity=0.141 Sum_probs=83.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------hhh-----hhc-------------cc-HH
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------VLT-----EVQ-------------TE-IE 193 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------Fe~-----~I~-------------Ts-le 193 (510)
+.+| .|++|+||||+.+.|.+ .. ..++.+ .+||.| +.. .+. .. .+
T Consensus 6 g~~i~~eG~~gsGKsT~~~~l~~~l~-~~~~~v-~~~~~p~~~~~g~~i~~~l~~~~~~~~~~~~~~llf~a~R~~~~~~ 83 (213)
T 4edh_A 6 GLFVTLEGPEGAGKSTNRDYLAERLR-ERGIEV-QLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAG 83 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHH-TTTCCE-EEEESSCSSHHHHHHHHHHHSCCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHHHH-HcCCCc-ccccCCCCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4444 89999999999999877 22 122223 245555 110 010 11 23
Q ss_pred HHHHHHHcCCeEEEEe------ccCC----chhHhh---hc----CCCce-EEEEeCCCHHHHHHHHHhcCC-Cc----H
Q psy6613 194 RVYELASTLQLVVLDC------DTIN----HPSQLA---KT----NLSPC-IVYLKISSPKVLQRLIKSRGK-SQ----T 250 (510)
Q Consensus 194 sI~~vi~sGKi~ILDI------D~qg----~~lq~l---ks----~l~Pi-vIFIkPPS~e~L~~rLr~Rgt-~~----~ 250 (510)
.|...+++|++||+|= -.|+ ...+.+ .. .+.|- +||+.. +.+++.+|+..|+. +. .
T Consensus 84 ~i~p~l~~g~~Vi~DRy~~S~~ayq~~~~g~~~~~~~~l~~~~~~~~~PDlvi~Ld~-~~e~~~~Ri~~R~~~dr~E~~~ 162 (213)
T 4edh_A 84 VIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDL-PVEIGLARAAARGRLDRFEQED 162 (213)
T ss_dssp THHHHHHTTCEEEEESCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEEC-CHHHHHHHHCCCSSCCTTTTSC
T ss_pred HHHHHHHCCCEEEECccHhHHHHHhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeC-CHHHHHHHHHhcCCcCcccccH
Confidence 3566678999999993 2232 001211 11 24564 555555 48999999988863 21 1
Q ss_pred HHHHHHH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHHH
Q psy6613 251 RHLNVQM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 251 e~i~kRL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~~ 296 (510)
.+..+++ +.-.++...++.. -++|. +.++++..+++.++|+.++.
T Consensus 163 ~~~~~rv~~~y~~l~~~~~~~-~~vIDa~~s~eeV~~~I~~~l~~~l~ 209 (213)
T 4edh_A 163 RRFFEAVRQTYLQRAAQAPER-YQVLDAGLPLAEVQAGLDRLLPNLLE 209 (213)
T ss_dssp HHHHHHHHHHHHHHHHHCTTT-EEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 3455566 4445565555432 23443 46799999998888776653
No 253
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=97.71 E-value=0.0002 Score=64.88 Aligned_cols=67 Identities=21% Similarity=0.297 Sum_probs=40.9
Q ss_pred eEEEEeCCCHHHHHHHHHhcCCCcHH----HHHHHH-HHHHHHHhcCC-CCccEEEeCC-CHHHHHHHHHHHHHH
Q psy6613 226 CIVYLKISSPKVLQRLIKSRGKSQTR----HLNVQM-VAAEKLAQCPQ-EMFDVILDEN-QLEDACEHIAEYLEA 293 (510)
Q Consensus 226 ivIFIkPPS~e~L~~rLr~Rgt~~~e----~i~kRL-~aa~eLEq~~~-~~FD~VIvND-dLd~A~~eL~~ilea 293 (510)
++||+..| .+++.+|+..|+..... +...++ ..-.++...|. ..-|++|.++ ++++.++++.+++..
T Consensus 127 ~vi~L~~~-~e~~~~Rl~~R~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Id~~~~~~~v~~~I~~~l~~ 200 (205)
T 2jaq_A 127 IVIYLRVS-TKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFYKQNVYDFPFFVVDAELDVKTQIELIMNKLNS 200 (205)
T ss_dssp EEEEEECC-HHHHHHHHHHHTCHHHHHSCHHHHHHHHHHHHHHHHHHTTTSCEEEEETTSCHHHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHHHcCChhhhcCcHHHHHHHHHHHHHHHHHccccCcEEEEECCCCHHHHHHHHHHHHHH
Confidence 67888886 77888888777643221 334455 33333333332 3457888765 688888888866654
No 254
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=97.71 E-value=6.8e-05 Score=77.15 Aligned_cols=93 Identities=16% Similarity=0.054 Sum_probs=60.4
Q ss_pred EecCcCChHHHHHHHhc-CCC--------CceeeecCCCchh-----------------h-hhhhc------ccHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPS--------KRAIMERSNSRSS-----------------V-LTEVQ------TEIERVYE 197 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~--------~F~~sVshTTR~p-----------------F-e~~I~------TslesI~~ 197 (510)
+||+|+|||||...|.+ .+. .+...++.||++| + .+.+. ...+.|.+
T Consensus 46 ~GPTgsGKTtLa~~LA~~l~~eiIs~Ds~qvYr~mdIgTakp~~eE~~gvphhlidi~~~~~e~~s~~~F~~~a~~~i~~ 125 (339)
T 3a8t_A 46 MGATGTGKSRLSIDLAAHFPLEVINSDKMQVYKGLDITTNKISVPDRGGVPHHLLGEVDPARGELTPADFRSLAGKAVSE 125 (339)
T ss_dssp ECSTTSSHHHHHHHHHTTSCEEEEECCSSTTBSSCTTTTTCCCSGGGTTCCEESSSCBCGGGCCCCHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHCCCcEEcccccccccceeeecCCCCHHHHcCCCEeeccccCcccCccCHHHHHHHHHHHHHH
Confidence 99999999999999998 442 2344567899987 1 11110 34566788
Q ss_pred HHHcCCeEEEE-------------------eccCCchhH---hhhc-CCCceEEEEeCCCHHHHHHHHHhc
Q psy6613 198 LASTLQLVVLD-------------------CDTINHPSQ---LAKT-NLSPCIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 198 vi~sGKi~ILD-------------------ID~qg~~lq---~lks-~l~PivIFIkPPS~e~L~~rLr~R 245 (510)
+...|+++|+- +|+++ +. .+.. .....+||..+|+.++|.+|+..|
T Consensus 126 i~~~g~~pIlvGGtglYi~all~g~~~p~~~d~~~--a~~~~~~~~~~~~~~~~i~L~~~re~L~~RI~~R 194 (339)
T 3a8t_A 126 ITGRRKLPVLVGGSNSFIHALLVDRFDSSGPGVFE--EGSHSVVSSELRYDCCFLWVDVSVKVLTDYLAKR 194 (339)
T ss_dssp HHHTTCEEEEECCCHHHHHHHHBSSCCTTCC---------------CBSSEEEEEEEECCHHHHHHHHHHH
T ss_pred HHhcCCeEEEEcCHHHHHHHHHhCCCCCcccChhh--hcccCccccccccCeEEEEEeCCHHHHHHHHHhh
Confidence 88999999995 33333 21 0111 113456677777899999999876
No 255
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=97.70 E-value=3.3e-05 Score=80.49 Aligned_cols=121 Identities=13% Similarity=0.009 Sum_probs=71.3
Q ss_pred CCeE--EecCcCChHHHHHHHhcCCCCceeeecCCCchhhhhhhcccHHHHHHHHHcCCeEEEEeccCCc-----hhHhh
Q psy6613 147 GMII--ITRVTADISLAKRSLMSNPSKRAIMERSNSRSSVLTEVQTEIERVYELASTLQLVVLDCDTINH-----PSQLA 219 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~pFe~~I~TslesI~~vi~sGKi~ILDID~qg~-----~lq~l 219 (510)
+++| +|++|+||||+.++|.+.-. +.+ ++ ...+ ....+..+.+...+..|+.||+|...-.. ..+++
T Consensus 258 ~~lIil~G~pGSGKSTla~~L~~~~~-~~~-i~---~D~~-~~~~~~~~~~~~~l~~g~~vIiD~~~~~~~~r~~~~~~~ 331 (416)
T 3zvl_A 258 PEVVVAVGFPGAGKSTFIQEHLVSAG-YVH-VN---RDTL-GSWQRCVSSCQAALRQGKRVVIDNTNPDVPSRARYIQCA 331 (416)
T ss_dssp CCEEEEESCTTSSHHHHHHHHTGGGT-CEE-CC---GGGS-CSHHHHHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhcC-cEE-Ec---cchH-HHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHHH
Confidence 4444 99999999999999987211 111 11 1111 11124556778888999999999764330 01122
Q ss_pred hc-CCCceEEEEeCCCHHHHHHHHHhcCC------CcHHHHHHHH-HHHHHHHhcCCCCccEEEe
Q psy6613 220 KT-NLSPCIVYLKISSPKVLQRLIKSRGK------SQTRHLNVQM-VAAEKLAQCPQEMFDVILD 276 (510)
Q Consensus 220 ks-~l~PivIFIkPPS~e~L~~rLr~Rgt------~~~e~i~kRL-~aa~eLEq~~~~~FD~VIv 276 (510)
+. ....++||+ .++.+++.+|+..|+. ...+.+..++ .+-++... ...||+|+.
T Consensus 332 ~~~~~~~~~v~l-~~~~e~l~~R~~~R~~~~~~~~~~~~~~~~~~~~~~e~P~~--~E~fd~v~~ 393 (416)
T 3zvl_A 332 KDAGVPCRCFNF-CATIEQARHNNRFREMTDPSHAPVSDMVMFSYRKQFEPPTL--AEGFLEILE 393 (416)
T ss_dssp HHHTCCEEEEEE-CCCHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHCCCCCG--GGTCSEEEE
T ss_pred HHcCCeEEEEEE-eCCHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHhcCCCCc--ccCCcEEEE
Confidence 22 333344555 7789999999987753 3344555555 32222222 367999884
No 256
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=97.69 E-value=4.8e-05 Score=70.06 Aligned_cols=56 Identities=23% Similarity=0.457 Sum_probs=48.3
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhHHHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVKLEN 112 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~~Er 112 (510)
.-+++|+|+|++..+. +|+|+.||++.|.+..+.+||.+.. .+..|++|+....++
T Consensus 14 ~~~~~al~d~~~~~~~-------el~~~~Gd~~~v~~~~~~~w~~~~~---~g~~gl~p~~~v~~~ 69 (222)
T 3ehr_A 14 VKVFRALYTFEPRTPD-------ELYIEEGDIIYITDMSDTNWWKGTS---KGRTGLIPSNYVAEQ 69 (222)
T ss_dssp CEEEEESSCCCCSSTT-------BCCCCTTCEEEEEECCSSSEEEEEE---TTEEEEEEHHHHHHH
T ss_pred ceEEEEeCCcCCCCCC-------cccccCCCEEEEeccccchhHhccc---CCcceeechhhcccc
Confidence 4468999999999875 5999999999999999999999987 468999998766553
No 257
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=97.68 E-value=0.00038 Score=63.60 Aligned_cols=136 Identities=15% Similarity=0.124 Sum_probs=72.7
Q ss_pred EecCcCChHHHHHHHhcC-CCCceeeecCCCchh---------hhhhhc------ccHHHHHHHHHcCCeEEEEeccCCc
Q psy6613 151 ITRVTADISLAKRSLMSN-PSKRAIMERSNSRSS---------VLTEVQ------TEIERVYELASTLQLVVLDCDTINH 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~-P~~F~~sVshTTR~p---------Fe~~I~------TslesI~~vi~sGKi~ILDID~qg~ 214 (510)
+|++|+||||+.+.|.+. .....+......|.. |+..+. .-++.+..++..+..+|+|.+ +
T Consensus 16 ~G~~GsGKSTv~~~La~~l~g~~~id~d~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~l~~~~~~~g~~vi~~~--~- 92 (184)
T 1y63_A 16 TGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRLLDFMEPIMVSRGNHVVDYH--S- 92 (184)
T ss_dssp ECSTTSSHHHHHHHHHHHSTTEEEEEHHHHHHHTTCSCC------CCCCCHHHHHHHHHHHHHHHTSSSEEEEECS--C-
T ss_pred ECCCCCCHHHHHHHHHHhcCCCEEeeHHHHHHHhhhhhhHHHHhhhcccCCCCHHHHHHHHHHHHhccCCEEEeCc--h-
Confidence 999999999999988763 332222222222321 111111 113455566633445677755 3
Q ss_pred hhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HH-----HHHHHhcCCCCccEEEe-C-CCHHHHHHH
Q psy6613 215 PSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VA-----AEKLAQCPQEMFDVILD-E-NQLEDACEH 286 (510)
Q Consensus 215 ~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~a-----a~eLEq~~~~~FD~VIv-N-DdLd~A~~e 286 (510)
...++......+||+.+ +.+++.+|+..|+... .....++ .+ ..+-...|. -|+||. | .++++...+
T Consensus 93 -~~~~~~~~~~~vi~l~~-~~e~~~~Rl~~R~~~~-~~~~~~~~~q~~~~l~~~~~~~y~--~~~vi~~n~~~~~~~~~~ 167 (184)
T 1y63_A 93 -SELFPERWFHMVVVLHT-STEVLFERLTKRQYSE-AKRAENMEAEIQCICEEEARDAYE--DDIVLVRENDTLEQMAAT 167 (184)
T ss_dssp -CTTSCGGGCSEEEEEEC-CHHHHHHHHHHTTCCH-HHHHHHHHHHHTTHHHHHHHHHSC--GGGEEEEECSSHHHHHHH
T ss_pred -HhhhhhccCCEEEEEEC-CHHHHHHHHHhCCCCh-hhhHhhHHHHHHHHHHHHHHHHhc--cCcEEECCCCCHHHHHHH
Confidence 33343322235666665 5889999999886442 2222333 11 112122333 276775 5 578888777
Q ss_pred HHHHHHHH
Q psy6613 287 IAEYLEAY 294 (510)
Q Consensus 287 L~~ileai 294 (510)
+.++++.+
T Consensus 168 v~~i~~~l 175 (184)
T 1y63_A 168 VEEIRERV 175 (184)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666554
No 258
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=97.64 E-value=0.00037 Score=63.90 Aligned_cols=138 Identities=8% Similarity=0.090 Sum_probs=74.7
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh---------------hh-------hhhc-ccHHHHHHHHHcC-CeE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS---------------VL-------TEVQ-TEIERVYELASTL-QLV 205 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p---------------Fe-------~~I~-TslesI~~vi~sG-Ki~ 205 (510)
+|++|+||||+.++|.+ .. ...+......|.- +. +.++ .-.+.|...+..| ..+
T Consensus 21 ~G~~GsGKsT~~~~L~~~~g-~~~i~~d~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~l~~~i~~~l~~g~~~~ 99 (203)
T 1ukz_A 21 LGGPGAGKGTQCEKLVKDYS-FVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKF 99 (203)
T ss_dssp ECSTTSSHHHHHHHHHHHSS-CEEEEHHHHHHHHHHSTTCSCHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ECCCCCCHHHHHHHHHHHcC-ceEEeHHHHHHHHHhccCCHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHhhhccCCCeE
Confidence 89999999999999987 43 2222211111110 00 0001 2234455667777 578
Q ss_pred EEEeccCCchhH---hhhcCC--CceEEEEeCCCHHHHHHHHHhcC------CCcHHHHHHHHHHH----HHHHhcCCCC
Q psy6613 206 VLDCDTINHPSQ---LAKTNL--SPCIVYLKISSPKVLQRLIKSRG------KSQTRHLNVQMVAA----EKLAQCPQEM 270 (510)
Q Consensus 206 ILDID~qg~~lq---~lks~l--~PivIFIkPPS~e~L~~rLr~Rg------t~~~e~i~kRL~aa----~eLEq~~~~~ 270 (510)
|+|.-+.+ .. .++..+ .-++|||.+| .+++.+|+..|+ .+..+.+.+|+..- ..+...| ..
T Consensus 100 i~dg~~~~--~~~~~~~~~~~~~~~~~i~l~~~-~e~~~~Rl~~R~~~~~~~~~~~e~~~~r~~~~~~~~~~~~~~~-~~ 175 (203)
T 1ukz_A 100 LIDGFPRK--MDQAISFERDIVESKFILFFDCP-EDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYF-ET 175 (203)
T ss_dssp EEETCCCS--HHHHHHHHHHTCCCSEEEEEECC-HHHHHHHHHHHHHHHCCTTCSHHHHHHHHHHHHHTTHHHHHHH-HT
T ss_pred EEeCCCCC--HHHHHHHHHhcCCCCEEEEEECC-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHhhHHHHHHH-Hh
Confidence 88866554 32 233222 2367888876 467777776553 23455666665211 1121111 12
Q ss_pred ccEE--Ee-CCCHHHHHHHHHHHHHH
Q psy6613 271 FDVI--LD-ENQLEDACEHIAEYLEA 293 (510)
Q Consensus 271 FD~V--Iv-NDdLd~A~~eL~~ilea 293 (510)
.|.+ |. +.++++.++++.++|+.
T Consensus 176 ~~~vi~id~~~~~e~v~~~i~~~l~~ 201 (203)
T 1ukz_A 176 KSKVVRVRCDRSVEDVYKDVQDAIRD 201 (203)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHHHHH
T ss_pred cCcEEEEECCCCHHHHHHHHHHHHhc
Confidence 3443 33 45799999999876653
No 259
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=97.63 E-value=8.2e-05 Score=67.18 Aligned_cols=92 Identities=11% Similarity=0.023 Sum_probs=53.4
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhhhhh-----------h-----cccHHHHHHHHHcCCeEEEEeccCC
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTE-----------V-----QTEIERVYELASTLQLVVLDCDTIN 213 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~-----------I-----~TslesI~~vi~sGKi~ILDID~qg 213 (510)
+|++|+||||+.+.|.+ ....| +. ...-|..+... + ..-.+.+..+++.|..+|+|.....
T Consensus 11 ~G~~GsGKST~~~~L~~~l~~~~-i~-~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~vi~d~~~~~ 88 (193)
T 2rhm_A 11 TGHPATGKTTLSQALATGLRLPL-LS-KDAFKEVMFDGLGWSDREWSRRVGATAIMMLYHTAATILQSGQSLIMESNFRV 88 (193)
T ss_dssp EESTTSSHHHHHHHHHHHHTCCE-EE-HHHHHHHHHHHHCCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCCH
T ss_pred ECCCCCCHHHHHHHHHHHcCCeE-ec-HHHHHHHHHHhcCccchHHHHHhhHHHHHHHHHHHHHHHhCCCeEEEecCCCC
Confidence 89999999999999876 32111 11 11111111110 0 0122345667789999999988721
Q ss_pred chh---Hh--hhc-CCCc-eEEEEeCCCHHHHHHHHHhcC
Q psy6613 214 HPS---QL--AKT-NLSP-CIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 214 ~~l---q~--lks-~l~P-ivIFIkPPS~e~L~~rLr~Rg 246 (510)
.. .. +.. ...| ++||+. .+.+++.+|+..|+
T Consensus 89 -~~~~~~~~~l~~~~~~~~~~v~l~-~~~e~~~~R~~~R~ 126 (193)
T 2rhm_A 89 -DLDTERMQNLHTIAPFTPIQIRCV-ASGDVLVERILSRI 126 (193)
T ss_dssp -HHHHHHHHHHHHHSCCEEEEEEEE-CCHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhcCCeEEEEEEe-CCHHHHHHHHHHhc
Confidence 10 12 233 3445 456665 46899999987775
No 260
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=97.53 E-value=0.0024 Score=57.29 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=54.3
Q ss_pred HHHHHHcCCeEEEEecc----------CCchhHhh-------hcCCC-ceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHH
Q psy6613 195 VYELASTLQLVVLDCDT----------INHPSQLA-------KTNLS-PCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQ 256 (510)
Q Consensus 195 I~~vi~sGKi~ILDID~----------qg~~lq~l-------ks~l~-PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kR 256 (510)
|...+.+|..+|+|--. .+.....+ +..+. -.+||+..| .+++.+|+.+|+....++..++
T Consensus 76 i~~~l~~~~~vi~dr~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~l~~~-~e~~~~Rl~~r~~~~~~~~~~~ 154 (195)
T 2pbr_A 76 IIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIP-VDIALRRLKEKNRFENKEFLEK 154 (195)
T ss_dssp HHHHHHTTCEEEEESCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECC-HHHHHHHHHTTTCCCCHHHHHH
T ss_pred HHHHHhCCCEEEECcchhHHHHHccccCCCCHHHHHHHHHHhhcCCCCCEEEEEeCC-HHHHHHHhhccCccchHHHHHH
Confidence 34557899999999311 11001111 11223 367777765 5777778777665445556666
Q ss_pred H-HHHHHHHhcCCCCccEEEeCC-CHHHHHHHHHHHHH
Q psy6613 257 M-VAAEKLAQCPQEMFDVILDEN-QLEDACEHIAEYLE 292 (510)
Q Consensus 257 L-~aa~eLEq~~~~~FD~VIvND-dLd~A~~eL~~ile 292 (510)
+ ..-.++...+ + -+++|.|+ ++++.++++.+++.
T Consensus 155 ~~~~~~~~~~~~-~-~~~~Id~~~~~~~~~~~i~~~l~ 190 (195)
T 2pbr_A 155 VRKGFLELAKEE-E-NVVVIDASGEEEEVFKEILRALS 190 (195)
T ss_dssp HHHHHHHHHHHS-T-TEEEEETTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC-C-CEEEEECCCCHHHHHHHHHHHHH
Confidence 6 3334443332 1 22777765 68888888886654
No 261
>3v9p_A DTMP kinase, thymidylate kinase; ssgcid, STRU genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia thailandensis}
Probab=97.53 E-value=4.5e-05 Score=73.90 Aligned_cols=144 Identities=13% Similarity=0.061 Sum_probs=77.8
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCc---eeeecCCCchh----h----hhhh-------------c------ccH
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKR---AIMERSNSRSS----V----LTEV-------------Q------TEI 192 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F---~~sVshTTR~p----F----e~~I-------------~------Tsl 192 (510)
.+..| .||+|+||||+.++|.+ ....| ++.| .+||.| + .+.+ . .-.
T Consensus 24 ~g~~I~~eG~~GsGKsT~~~~l~~~l~~~~~~~g~~v-~~~rep~~t~~g~~ir~~l~~~~~~~~~~~llf~a~R~~~~~ 102 (227)
T 3v9p_A 24 RGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHV-VVTREPGGTRLGETLREILLNQPMDLETEALLMFAGRREHLA 102 (227)
T ss_dssp CCCEEEEECCC---CHHHHHHHHHHHHHHHGGGTCCE-EEEESSSSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHhhccccceee-eeecCCCCChHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 35554 89999999999999887 43221 3333 356665 1 0000 0 122
Q ss_pred HHHHHHHHcCCeEEEEec------cCC----chhHhh---hc----CCCc-eEEEEeCCCHHHHHHHHHhcCC----Cc-
Q psy6613 193 ERVYELASTLQLVVLDCD------TIN----HPSQLA---KT----NLSP-CIVYLKISSPKVLQRLIKSRGK----SQ- 249 (510)
Q Consensus 193 esI~~vi~sGKi~ILDID------~qg----~~lq~l---ks----~l~P-ivIFIkPPS~e~L~~rLr~Rgt----~~- 249 (510)
+.|...+++|++||+|=- .|+ ...+.+ .. .+.| .+||+..| .+++.+|+..|+. +.
T Consensus 103 ~~i~p~l~~g~~VI~DRy~~S~~ayq~~~~gl~~~~~~~l~~~~~~~~~PDl~I~Ldv~-~e~~~~Ri~~R~~~dr~E~~ 181 (227)
T 3v9p_A 103 LVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDKLEALERWVQGGFQPDLTVLFDVP-PQIASARRGAVRMPDKFESE 181 (227)
T ss_dssp HTHHHHHHTTCEEEEECCHHHHHHHHTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEECC-SSCGGGTTTCCCCC---CCH
T ss_pred HHHHHHHHcCCEEEEeccHhHHHHHhhhccCCCHHHHHHHHHHHhcCCCCCEEEEEeCC-HHHHHHHHHhccCccchhhh
Confidence 346667789999999921 111 001222 11 2455 45666555 5778888887752 11
Q ss_pred HHHHHHHH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHH
Q psy6613 250 TRHLNVQM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLE 292 (510)
Q Consensus 250 ~e~i~kRL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ile 292 (510)
..+..+++ +.-.++...++..| .+|. +.++++..+++.++|+
T Consensus 182 ~~ef~~rv~~~Y~~la~~~~~~~-~vIDa~~s~eeV~~~I~~~l~ 225 (227)
T 3v9p_A 182 SDAFFARTRAEYLRRAQEAPHRF-VIVDSSEPIAQIRKQLEGVLA 225 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTTE-EEEETTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCE-EEEeCCCCHHHHHHHHHHHHH
Confidence 12444555 44445655554322 3343 5678888888886654
No 262
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=97.51 E-value=7.5e-05 Score=68.61 Aligned_cols=136 Identities=11% Similarity=0.077 Sum_probs=71.5
Q ss_pred EecCcCChHHHHHHHhc-CCC-CceeeecCCCchh-------------hhh----------hhc-----ccHHHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPS-KRAIMERSNSRSS-------------VLT----------EVQ-----TEIERVYELAS 200 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~-~F~~sVshTTR~p-------------Fe~----------~I~-----TslesI~~vi~ 200 (510)
.|++|+||||+.+.|.+ ... .+.. .++|.+ |.. .+. ..++.|...+.
T Consensus 16 ~G~~GsGKST~~~~L~~~l~~~~~~~---~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 92 (212)
T 2wwf_A 16 EGLDRSGKSTQSKLLVEYLKNNNVEV---KHLYFPNRETGIGQIISKYLKMENSMSNETIHLLFSANRWEHMNEIKSLLL 92 (212)
T ss_dssp EESTTSSHHHHHHHHHHHHHHTTCCE---EEEESSCTTSHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHHcCCcE---EEEecCCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999876 211 1211 122221 100 000 12234666778
Q ss_pred cCCeEEEEeccCCc-h---------hHhhh---cC--CCceEEEEeCCCHHHHHHHHHhc-CCCcHHHHHHHHHHH-HHH
Q psy6613 201 TLQLVVLDCDTINH-P---------SQLAK---TN--LSPCIVYLKISSPKVLQRLIKSR-GKSQTRHLNVQMVAA-EKL 263 (510)
Q Consensus 201 sGKi~ILDID~qg~-~---------lq~lk---s~--l~PivIFIkPPS~e~L~~rLr~R-gt~~~e~i~kRL~aa-~eL 263 (510)
.|..||+|-.+.+. + ...+. .. ..-.+||+..|. +++.+|+..+ +....++...++... .++
T Consensus 93 ~~~~vi~D~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~d~vi~l~~~~-e~~~~Rl~~r~~r~~~~~~~~~~~~~~~~~ 171 (212)
T 2wwf_A 93 KGIWVVCDRYAYSGVAYSSGALNLNKTWCMNPDQGLIKPDVVFYLNVPP-NYAQNRSDYGEEIYEKVETQKKIYETYKHF 171 (212)
T ss_dssp HTCEEEEECCHHHHHHHHHHHSCCCHHHHHGGGTTSBCCSEEEEEECCT-TGGGGSTTTTSSTTCSHHHHHHHHHHGGGG
T ss_pred CCCEEEEecchhhHHHHHHhccCCCHHHHHHHhhCCCCCCEEEEEeCCH-HHHHHhhccCcccccHHHHHHHHHHHHHHH
Confidence 89999999544210 0 11111 21 123577777654 5666676543 112224455555222 222
Q ss_pred HhcCCCCccEEEeCC-CHHHHHHHHHHHHHH
Q psy6613 264 AQCPQEMFDVILDEN-QLEDACEHIAEYLEA 293 (510)
Q Consensus 264 Eq~~~~~FD~VIvND-dLd~A~~eL~~ilea 293 (510)
.. ..-+++|.|+ ++++.++++.++++.
T Consensus 172 ~~---~~~~~~Id~~~~~~~~~~~i~~~l~~ 199 (212)
T 2wwf_A 172 AH---EDYWINIDATRKIEDIHNDIVKEVTK 199 (212)
T ss_dssp TT---CTTEEEEECSSCHHHHHHHHHHHHTT
T ss_pred hc---cCCEEEEECCCCHHHHHHHHHHHHHH
Confidence 21 2346666654 688888888866543
No 263
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=97.50 E-value=6.7e-05 Score=74.96 Aligned_cols=51 Identities=10% Similarity=0.097 Sum_probs=42.5
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...|+|+|||.+. +++|++||++.+++..+++||.++. .+|..|+|||..+
T Consensus 198 ~~~v~al~dy~~~----------e~~~~kge~~~l~~~s~~~wW~v~~--~~G~~g~vPs~~~ 248 (283)
T 3pe0_A 198 RLPLLAVCDYKQV----------EVTVHKGDECQLVGPAQPSHWKVLS--SSGSEAAVPSVCF 248 (283)
T ss_dssp CEEEEECSCEECS----------SCEECTTCEEEEEEECSTTEEEEEC--C---EEEEEGGGE
T ss_pred CceEEeecCccCC----------cccccCCCEEEEeeCCCCCceEEEc--CCCCEeeccceEE
Confidence 4789999999874 4899999999999999999999997 3568899998765
No 264
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=97.38 E-value=0.0014 Score=60.23 Aligned_cols=91 Identities=12% Similarity=0.156 Sum_probs=51.2
Q ss_pred cCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCC-C
Q psy6613 201 TLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDEN-Q 279 (510)
Q Consensus 201 sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvND-d 279 (510)
.|..+|+|+..-. -..+. .+.-.+|||..| .+++.+|+..|+..+.+++..++......+..+ ...|+||.|+ +
T Consensus 104 ~~~~vv~~~~~l~--e~~~~-~~~d~vi~l~~~-~e~~~~Rl~~R~~~~~e~~~~r~~~q~~~~~~~-~~ad~vIdn~~~ 178 (206)
T 1jjv_A 104 TAPYTLFVVPLLI--ENKLT-ALCDRILVVDVS-PQTQLARSAQRDNNNFEQIQRIMNSQVSQQERL-KWADDVINNDAE 178 (206)
T ss_dssp CSSEEEEECTTTT--TTTCG-GGCSEEEEEECC-HHHHHHHHC-----CHHHHHHHHHHSCCHHHHH-HHCSEEEECCSC
T ss_pred CCCEEEEEechhh--hcCcH-hhCCEEEEEECC-HHHHHHHHHHcCCCCHHHHHHHHHhcCChHHHH-HhCCEEEECCCC
Confidence 4678898875422 11011 223578888875 677778887774445566666664211111111 1458999886 5
Q ss_pred HH----HHHHHHHHHHHHHHH
Q psy6613 280 LE----DACEHIAEYLEAYWR 296 (510)
Q Consensus 280 Ld----~A~~eL~~ileai~~ 296 (510)
++ +.++++..++..+..
T Consensus 179 ~~~~~~~~~~~i~~~~~~~~~ 199 (206)
T 1jjv_A 179 LAQNLPHLQQKVLELHQFYLQ 199 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHH
Confidence 88 777777777766543
No 265
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=97.36 E-value=0.00016 Score=67.82 Aligned_cols=54 Identities=20% Similarity=0.449 Sum_probs=46.0
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCC---ceEEEEccCCCceeeecChhHH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSN---WWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~---WWqar~v~~~~~~GlIPS~~~~ 110 (510)
.-.++|+|+|.+..+. .|+|+.||++.|+.+.+.+ ||.++. .++.|++|+....
T Consensus 170 ~~~~~al~d~~~~~~~-------eLa~~~G~~i~vl~~~~~~~~~Ww~~~~---~~~~G~~P~~yv~ 226 (239)
T 1ycs_B 170 KGVIYALWDYEPQNDD-------ELPMKEGDCMTIIHREDEDEIEWWWARL---NDKEGYVPRNLLG 226 (239)
T ss_dssp GGEEEESSCBCCSSTT-------BCCBCSSCEEEECCCCTTSCSSEEEEEE---TTEEEEEEGGGEE
T ss_pred cceEEEEeccCCCCCC-------cccccCCCEEEEEEecCCCCCCEEEEEE---CCcEEEeehHHee
Confidence 3468899999999865 5999999999999998776 999997 4689999998754
No 266
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=97.36 E-value=0.00017 Score=69.96 Aligned_cols=94 Identities=11% Similarity=0.045 Sum_probs=58.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCceee--------ecCCCchhhh-----------------h-hhc------ccHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIM--------ERSNSRSSVL-----------------T-EVQ------TEIERVYE 197 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~s--------VshTTR~pFe-----------------~-~I~------TslesI~~ 197 (510)
+||+|+|||||.+.|.. ....+... .+.+|+.+-. + .+. .....+ +
T Consensus 7 ~G~~GSGKSTla~~La~~~~~~~i~~D~~~~~~~~~~~t~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~i-~ 85 (253)
T 2ze6_A 7 YGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLIFEV-D 85 (253)
T ss_dssp ECCTTSSHHHHHHHHHHHHCCCEEECCSGGGCGGGTTTTTCCCGGGGTTCCEECSCCCCGGGCSCCHHHHHHHHHHHH-H
T ss_pred ECCCCcCHHHHHHHHHhcCCCeEEeccHHhccCCCccccCCCCHHHHhCCCeEEEeeeccccccccHHHHHHHHHHHH-H
Confidence 99999999999999976 22222111 1345554300 0 110 344455 6
Q ss_pred HHHcCCeEEEEeccCCchhHh-hhc-----CCCceEEEEeCCCHHHHHHHHHhcC
Q psy6613 198 LASTLQLVVLDCDTINHPSQL-AKT-----NLSPCIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 198 vi~sGKi~ILDID~qg~~lq~-lks-----~l~PivIFIkPPS~e~L~~rLr~Rg 246 (510)
++..|+.+|++..... ..+. ++. .+...+||+.+|..+++.+|++.|+
T Consensus 86 ~~~~g~~vIl~gg~~~-~~~~~~~~~~~~~~~~~~~i~l~~~~~e~l~~Rl~~R~ 139 (253)
T 2ze6_A 86 WRKSEEGLILEGGSIS-LLNCMAKSPFWRSGFQWHVKRLRLGDSDAFLTRAKQRV 139 (253)
T ss_dssp TTTTSSEEEEEECCHH-HHHHHHHCTTTTSSCEEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHhCCCCeEEeccHHH-HHHHHHhcccccccCceEEEEecchhHHHHHHHHHHHH
Confidence 6689999999976421 1111 111 1345789999999899999998774
No 267
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=97.35 E-value=0.0014 Score=61.28 Aligned_cols=141 Identities=12% Similarity=0.085 Sum_probs=73.4
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh------hhhhh--------cccHHH----HHHHH----HcCCeEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS------VLTEV--------QTEIER----VYELA----STLQLVVL 207 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p------Fe~~I--------~Tsles----I~~vi----~sGKi~IL 207 (510)
+||+|+||||+.+.|.+ .. ...+.+.+++|.. .-..+ ..+.+. +.+-+ ..+..+|+
T Consensus 11 ~G~~GsGKsT~~~~La~~l~-~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vi 89 (222)
T 1zak_A 11 SGAPASGKGTQCELIKTKYQ-LAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVPDEIVVNMVKERLRQPDAQENGWLL 89 (222)
T ss_dssp EESTTSSHHHHHHHHHHHHC-CEECCHHHHHHHHHHHTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHSHHHHHTCEEE
T ss_pred ECCCCCCHHHHHHHHHHHhC-CceecHHHHHHHHHHcCCchhHHHHHHHHcCCcCCHHHHHHHHHHHHhhccccCCcEEE
Confidence 89999999999999987 33 2233333344431 00001 011111 11111 12344566
Q ss_pred EeccCCch--hHhhhc-CCCc-eEEEEeCCCHHHHHHHHHhcC-----------------------------CCcHHHHH
Q psy6613 208 DCDTINHP--SQLAKT-NLSP-CIVYLKISSPKVLQRLIKSRG-----------------------------KSQTRHLN 254 (510)
Q Consensus 208 DID~qg~~--lq~lks-~l~P-ivIFIkPPS~e~L~~rLr~Rg-----------------------------t~~~e~i~ 254 (510)
|--+.+ . +..+.. ...| ++||+..| .+++.+|+..|+ .+..+.+.
T Consensus 90 dg~~~~-~~~~~~l~~~~~~~~~vi~L~~~-~~~~~~R~~~r~~~~~~g~~~~~~~~pp~~~~~~~~l~~r~~d~~~~i~ 167 (222)
T 1zak_A 90 DGYPRS-YSQAMALETLEIRPDTFILLDVP-DELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQRFDDTEEKVK 167 (222)
T ss_dssp ESCCCS-HHHHHHHHTTTCCCSEEEEEECC-HHHHHHHHTTEEECTTTCCEEESSSSCCCSSGGGGGCBCCTTCCTTHHH
T ss_pred ECCCCC-HHHHHHHHHcCCCCCEEEEEECC-HHHHHHHHHcCCcccccCCccccccCCCcccccccccccCCCCCHHHHH
Confidence 754443 1 122332 2333 56666664 677777775542 23346677
Q ss_pred HHH-HHHHH---HHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHH
Q psy6613 255 VQM-VAAEK---LAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYW 295 (510)
Q Consensus 255 kRL-~aa~e---LEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~ 295 (510)
+|+ ....+ +...|.+ ..++|. +.++++.++++.++|..++
T Consensus 168 ~Rl~~~~~~~~~l~~~y~~-~~~~Id~~~~~~ev~~~I~~~l~~~l 212 (222)
T 1zak_A 168 LRLETYYQNIESLLSTYEN-IIVKVQGDATVDAVFAKIDELLGSIL 212 (222)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CEEEEECSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh-cEEEEECCCCHHHHHHHHHHHHHhhc
Confidence 777 33333 3334433 234443 3568999999998887654
No 268
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=97.34 E-value=0.0012 Score=59.15 Aligned_cols=133 Identities=11% Similarity=0.050 Sum_probs=66.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecC----CCchhhh---hhh-------cccHHHHHHHHHc-CCeEEEEeccCCc
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERS----NSRSSVL---TEV-------QTEIERVYELAST-LQLVVLDCDTINH 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVsh----TTR~pFe---~~I-------~TslesI~~vi~s-GKi~ILDID~qg~ 214 (510)
.|++|+||||+.+.|.+ ....|.. .+. .-|.-|. ..+ ..-.+.+..++.. |..+|+|......
T Consensus 11 ~G~~GsGKST~a~~La~~l~~~~i~-d~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~l~~~g~~vi~d~~~~~~ 89 (183)
T 2vli_A 11 NGPFGVGKTHTAHTLHERLPGSFVF-EPEEMGQALRKLTPGFSGDPQEHPMWIPLMLDALQYASREAAGPLIVPVSISDT 89 (183)
T ss_dssp ECCC----CHHHHHHHHHSTTCEEC-CTHHHHHHHHHTSTTCCSCGGGSTTHHHHHHHHHHHHHHHCSSCEEEEECCCCH
T ss_pred ECCCCCCHHHHHHHHHHhcCCCEEE-chhhhHHHHHHhCccccchhhhhHHHHHHHHHHHHHHHHhCCCcEEEeeeccCH
Confidence 89999999999999876 3322220 100 0000011 000 0113456666766 8899999655320
Q ss_pred -----hhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCC-cHHHHHHHH-HHHHHHHhcCCCCccEEEeCC--CHHHHH
Q psy6613 215 -----PSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKS-QTRHLNVQM-VAAEKLAQCPQEMFDVILDEN--QLEDAC 284 (510)
Q Consensus 215 -----~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~-~~e~i~kRL-~aa~eLEq~~~~~FD~VIvND--dLd~A~ 284 (510)
..+.++. .....+||+.. +.+++.+|+..|+.. -..+...++ ..-..+ . ++.+|.++ ++++++
T Consensus 90 ~~~~~~~~~l~~~~~~~~~i~l~~-~~e~~~~R~~~R~~r~~~~~~~~~~~~~~~~~-----~-~~~~Id~~~~~~~~~~ 162 (183)
T 2vli_A 90 ARHRRLMSGLKDRGLSVHHFTLIA-PLNVVLERLRRDGQPQVNVGTVEDRLNELRGE-----Q-FQTHIDTAGLGTQQVA 162 (183)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEC-CHHHHHHHHHTC----CCHHHHHHHHHHHTSG-----G-GCSEEECTTCCHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEEEeC-CHHHHHHHHHhccccchhHHHHHHHHHhhccc-----c-cceEeeCCCCCHHHHH
Confidence 0123333 33445688887 488899999887531 112222222 211112 1 33377765 688888
Q ss_pred HHHHHHH
Q psy6613 285 EHIAEYL 291 (510)
Q Consensus 285 ~eL~~il 291 (510)
+++.+++
T Consensus 163 ~~I~~~l 169 (183)
T 2vli_A 163 EQIAAQV 169 (183)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887554
No 269
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=97.34 E-value=0.0022 Score=59.57 Aligned_cols=91 Identities=13% Similarity=0.180 Sum_probs=55.7
Q ss_pred cCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCC-C
Q psy6613 201 TLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDEN-Q 279 (510)
Q Consensus 201 sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvND-d 279 (510)
.|..+|+|...-- -.. +. ...-++|||.. +.+++.+|+..|+..+.+++..++......+. +...+|++|.|+ +
T Consensus 106 ~~~~vi~~~~~l~-~~~-~~-~~~d~vi~l~~-~~e~~~~Rl~~R~~~~~~~~~~~~~~~~~~~~-~~~~ad~vId~~~~ 180 (218)
T 1vht_A 106 TSPYVLWVVPLLV-ENS-LY-KKANRVLVVDV-SPETQLKRTMQRDDVTREHVEQILAAQATREA-RLAVADDVIDNNGA 180 (218)
T ss_dssp CSSEEEEECTTTT-TTT-GG-GGCSEEEEEEC-CHHHHHHHHHHHHTCCHHHHHHHHHHSCCHHH-HHHHCSEEEECSSC
T ss_pred CCCEEEEEeeeee-ccC-cc-ccCCEEEEEEC-CHHHHHHHHHHcCCCCHHHHHHHHHhcCChHH-HHHhCCEEEECCCC
Confidence 4667777775321 011 11 12337899986 57888888887754445555555532111111 113468999887 7
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6613 280 LEDACEHIAEYLEAYWR 296 (510)
Q Consensus 280 Ld~A~~eL~~ileai~~ 296 (510)
+++.++++.++++.+..
T Consensus 181 ~~~~~~~I~~~l~~~~~ 197 (218)
T 1vht_A 181 PDAIASDVARLHAHYLQ 197 (218)
T ss_dssp TTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999988887765
No 270
>4tmk_A Protein (thymidylate kinase); ATP:DTMP phosphotransferase, transferase; HET: T5A; 1.98A {Escherichia coli} SCOP: c.37.1.1 PDB: 5tmp_A*
Probab=97.32 E-value=0.0013 Score=62.74 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=82.3
Q ss_pred CCeE--EecCcCChHHHHHHHhc-C-CCCceeeecCCCchh-----------hhh--------hhc-------------c
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-N-PSKRAIMERSNSRSS-----------VLT--------EVQ-------------T 190 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~-P~~F~~sVshTTR~p-----------Fe~--------~I~-------------T 190 (510)
|++| .|+.|+||||+.+.|.+ . ...+. .+ .+||.| +.. .+. .
T Consensus 3 g~~i~~eG~~gsGKsT~~~~l~~~l~~~~~~-~v-~~~rep~~t~~g~~ir~~l~~~~~~~~~~~~~~~e~lL~~A~R~~ 80 (213)
T 4tmk_A 3 SKYIVIEGLEGAGKTTARNVVVETLEQLGIR-DM-VFTREPGGTQLAEKLRSLLLDIKSVGDEVITDKAEVLMFYAARVQ 80 (213)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHHHTTCC-CE-EEEESSCSSHHHHHHHHHHHSTTTTTTCCCCHHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCC-cc-eeeeCCCCCHHHHHHHHHHhcccccccccCChHHHHHHHHHHHHH
Confidence 4444 79999999999998876 2 22221 22 345554 111 111 2
Q ss_pred cH-HHHHHHHHcCCeEEEEec------cCC----chhHhh---hc----CCCc-eEEEEeCCCHHHHHHHHHhcCCC-c-
Q psy6613 191 EI-ERVYELASTLQLVVLDCD------TIN----HPSQLA---KT----NLSP-CIVYLKISSPKVLQRLIKSRGKS-Q- 249 (510)
Q Consensus 191 sl-esI~~vi~sGKi~ILDID------~qg----~~lq~l---ks----~l~P-ivIFIkPPS~e~L~~rLr~Rgt~-~- 249 (510)
.+ +.|...+++|++||.|=- .|| .....+ .. .+.| ++||+.. +.++..+|+..||.. .
T Consensus 81 ~~~~~i~paL~~g~~VI~DRy~~S~~AYq~~~~g~~~~~~~~l~~~~~~~~~PDl~i~Ldv-~~e~~~~Ri~~R~~~dr~ 159 (213)
T 4tmk_A 81 LVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDV-TPEVGLKRARARGELDRI 159 (213)
T ss_dssp HHHHTHHHHHHTTCEEEEECCHHHHHHHTTTTTCCCHHHHHHHHHHHHTTCCCSEEEEEEC-CHHHHHHHHHHHSSCCTT
T ss_pred HHHHHHHHHHHCCCEEEEcCcHhHHHHHcccccCCCHHHHHHHHHHhccCCCCCEEEEEeC-CHHHHHHHHHhcCCccch
Confidence 22 236667899999999932 122 001222 21 2455 4556555 478888888887641 1
Q ss_pred ---HHHHHHHH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHHH
Q psy6613 250 ---TRHLNVQM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 250 ---~e~i~kRL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~~ 296 (510)
..+..+++ +.-.++...+ ..| .+|. +.++++.++++.++|+.++.
T Consensus 160 E~~~~~f~~rv~~~y~~la~~~-~~~-~vIDa~~s~eeV~~~I~~~l~~~l~ 209 (213)
T 4tmk_A 160 EQESFDFFNRTRARYLELAAQD-KSI-HTIDATQPLEAVMDAIRTTVTHWVK 209 (213)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTC-TTE-EEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHC-CcE-EEECCCCCHHHHHHHHHHHHHHHHH
Confidence 13445566 4444554433 222 3333 46799999999988877653
No 271
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=97.31 E-value=0.00092 Score=60.70 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=48.7
Q ss_pred CCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHH-HHHHHhcCCCCccEEEeCC-C
Q psy6613 202 LQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVA-AEKLAQCPQEMFDVILDEN-Q 279 (510)
Q Consensus 202 GKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~a-a~eLEq~~~~~FD~VIvND-d 279 (510)
|..||+|...-- ...+. ...-++|||..| .+++.+|+..|+..+.++...++.. ....+. ...+|++|.|+ +
T Consensus 106 ~~~vi~d~~~l~--~~~~~-~~~d~~i~l~~~-~e~~~~R~~~R~~~~~~~~~~~i~~~~~~~~~--~~~ad~vId~~~~ 179 (203)
T 1uf9_A 106 APLVFLEIPLLF--EKGWE-GRLHGTLLVAAP-LEERVRRVMARSGLSREEVLARERAQMPEEEK--RKRATWVLENTGS 179 (203)
T ss_dssp CSEEEEECTTTT--TTTCG-GGSSEEEEECCC-HHHHHHHHHTTTCCTTHHHHHHHTTSCCHHHH--HHHCSEEECCSSH
T ss_pred CCEEEEEeccee--ccCch-hhCCEEEEEECC-HHHHHHHHHHcCCCCHHHHHHHHHHCCChhHH--HHhCCEEEECCCC
Confidence 688888864321 00011 123478999864 7888888887754444555555521 111111 13468888877 4
Q ss_pred HHHHHHHHHHHHH
Q psy6613 280 LEDACEHIAEYLE 292 (510)
Q Consensus 280 Ld~A~~eL~~ile 292 (510)
+++.++++.+++.
T Consensus 180 ~~~~~~~i~~~~~ 192 (203)
T 1uf9_A 180 LEDLERALKAVLA 192 (203)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777775543
No 272
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=97.25 E-value=0.00056 Score=65.84 Aligned_cols=144 Identities=9% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCeE--EecCcCChHHHHHHHhcCCCCceeeecCCCch------hh----hhhhc--------ccH----HHHHHHHHcC
Q psy6613 147 GMII--ITRVTADISLAKRSLMSNPSKRAIMERSNSRS------SV----LTEVQ--------TEI----ERVYELASTL 202 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~------pF----e~~I~--------Tsl----esI~~vi~sG 202 (510)
.++| +||+|+||+|..++|.++..-..++.-.--|. +. .+.+. .-. +.+.+....+
T Consensus 29 ~kiI~llGpPGsGKgTqa~~L~~~~g~~hIstGdllR~~i~~~t~lg~~~~~~~~~G~lVpde~~~~lv~~~l~~~~~~~ 108 (217)
T 3umf_A 29 AKVIFVLGGPGSGKGTQCEKLVQKFHFNHLSSGDLLRAEVQSGSPKGKELKAMMERGELVPLEVVLALLKEAMIKLVDKN 108 (217)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHCCEEECHHHHHHHHHTTCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTTC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHCCceEcHHHHHHHHHHcCCchHHHHHHHHhcCCCCCHHHHHHHHHHHHhhccccc
Confidence 3554 89999999999999987211111111000011 10 00010 111 2333334456
Q ss_pred CeEEEEeccCCchhHhhh---c-CCCc-eEEEEeCCCHHHHHHHHHhcCC------CcHHHHHHHHH----HHHHHHhcC
Q psy6613 203 QLVVLDCDTINHPSQLAK---T-NLSP-CIVYLKISSPKVLQRLIKSRGK------SQTRHLNVQMV----AAEKLAQCP 267 (510)
Q Consensus 203 Ki~ILDID~qg~~lq~lk---s-~l~P-ivIFIkPPS~e~L~~rLr~Rgt------~~~e~i~kRL~----aa~eLEq~~ 267 (510)
+..|||-=|.. ..... . ...+ .+||+..| .+++.+|+.+|+. ++.+.+.+||+ ...-+...|
T Consensus 109 ~g~ilDGfPRt--~~Qa~~l~~~~~~~~~vi~l~v~-~e~~~~Rl~~R~~~~~R~DD~~e~i~~Rl~~Y~~~t~pl~~~Y 185 (217)
T 3umf_A 109 CHFLIDGYPRE--LDQGIKFEKEVCPCLCVINFDVS-EEVMRKRLLKRAETSNRVDDNEETIVKRFRTFNELTKPVIEHY 185 (217)
T ss_dssp SEEEEETBCSS--HHHHHHHHHHTCCCSEEEEEECC-HHHHHHHHSCC------CHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred cCcccccCCCc--HHHHHHHHHhCCccCEEEeccCC-HHHHHHHHhcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999988766 33332 2 2233 56777765 6788888877643 23466778872 222243334
Q ss_pred CCCccEEEe--CCCHHHHHHHHHHHHHH
Q psy6613 268 QEMFDVILD--ENQLEDACEHIAEYLEA 293 (510)
Q Consensus 268 ~~~FD~VIv--NDdLd~A~~eL~~ilea 293 (510)
...--++.+ +.+.++.++++..+|+.
T Consensus 186 ~~~~~l~~Idg~~~~eeV~~~I~~~l~k 213 (217)
T 3umf_A 186 KQQNKVITIDASGTVDAIFDKVNHELQK 213 (217)
T ss_dssp HTTTCEEEEETTSCHHHHHHHHHHHHHT
T ss_pred HhcCCEEEEECCCCHHHHHHHHHHHHHH
Confidence 333334444 35789999999876653
No 273
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=97.23 E-value=0.00058 Score=64.20 Aligned_cols=92 Identities=9% Similarity=0.001 Sum_probs=49.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhh------hhhh--------ccc----HHHHHHHHH--cCCeEEEEe
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSV------LTEV--------QTE----IERVYELAS--TLQLVVLDC 209 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pF------e~~I--------~Ts----lesI~~vi~--sGKi~ILDI 209 (510)
+|++|+||||+.+.|.+ .. ...+......|... -..+ ... ...+.+.+. .+..+|+|.
T Consensus 13 ~G~~GsGKsT~a~~La~~l~-~~~i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vid~ 91 (227)
T 1zd8_A 13 MGAPGSGKGTVSSRITTHFE-LKHLSSGDLLRDNMLRGTEIGVLAKAFIDQGKLIPDDVMTRLALHELKNLTQYSWLLDG 91 (227)
T ss_dssp EECTTSSHHHHHHHHHHHSS-SEEEEHHHHHHHHHHHTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHTCTTSCEEEES
T ss_pred ECCCCCCHHHHHHHHHHHcC-CeEEechHHHHHhhhcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHHhcccCCCEEEeC
Confidence 99999999999999986 32 22222222222210 0000 011 122333344 377889998
Q ss_pred ccCCchhHh--hhc-CCCceEEEEeCCCHHHHHHHHHhc
Q psy6613 210 DTINHPSQL--AKT-NLSPCIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 210 D~qg~~lq~--lks-~l~PivIFIkPPS~e~L~~rLr~R 245 (510)
-+.. +.+. +.. ....++||+.. +.+++.+|+..|
T Consensus 92 ~~~~-~~~~~~l~~~~~~~~vi~L~~-~~~~~~~R~~~R 128 (227)
T 1zd8_A 92 FPRT-LPQAEALDRAYQIDTVINLNV-PFEVIKQRLTAR 128 (227)
T ss_dssp CCCS-HHHHHHHHTTSCCCEEEEEEC-CHHHHHHHHTCE
T ss_pred CCCC-HHHHHHHHHhcCCCEEEEEEC-CHHHHHHHHHcC
Confidence 6643 3222 222 12336788877 467777777655
No 274
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=97.17 E-value=0.00059 Score=63.30 Aligned_cols=71 Identities=13% Similarity=0.142 Sum_probs=29.1
Q ss_pred cCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHH-----HH-hcCCCCccE
Q psy6613 201 TLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEK-----LA-QCPQEMFDV 273 (510)
Q Consensus 201 sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~e-----LE-q~~~~~FD~ 273 (510)
.+.+||+|...-. ...+. .+..++|||.+|. ++..+|+..|+ ++...++ ..-.. ++ ......+|+
T Consensus 124 ~~~~vIveg~~l~--~~~~~-~~~d~~i~v~~~~-~~~~~R~~~R~----~~~~~~~~~~~~~~~~~y~~~~~~~~~AD~ 195 (201)
T 1rz3_A 124 DSDMIMIEGVFLQ--RKEWR-PFFDFVVYLDCPR-EIRFARENDQV----KQNIQKFINRYWKAEDYYLETEEPIKRADV 195 (201)
T ss_dssp TCSEEEEEETTTT--STTTG-GGCSEEEEECCC-------------------CHHHHHHHHHHHHHHHHHHHCHHHHCSE
T ss_pred CCcEEEEechhhc--cHHHH-hhcCEEEEEeCCH-HHHHHHHhcCC----HHHHHHHHhheeHHHHHHhCCCCcHhhCcE
Confidence 4678888876533 11111 2345899999986 55556666676 3333444 11111 11 111256899
Q ss_pred EEeCCC
Q psy6613 274 ILDENQ 279 (510)
Q Consensus 274 VIvNDd 279 (510)
||.|+.
T Consensus 196 vI~N~~ 201 (201)
T 1rz3_A 196 VFDMTS 201 (201)
T ss_dssp EEC---
T ss_pred EecCCC
Confidence 999873
No 275
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=97.14 E-value=0.0018 Score=59.23 Aligned_cols=83 Identities=11% Similarity=0.165 Sum_probs=50.3
Q ss_pred CeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHhcCCCCccEEEeCC-CH
Q psy6613 203 QLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQCPQEMFDVILDEN-QL 280 (510)
Q Consensus 203 Ki~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvND-dL 280 (510)
..+|+|...-. -..+. .+..++|||..| .+++.+|+..||. +.+++..++ ......+. ....|+||.|+ ++
T Consensus 106 ~~vive~~~l~--~~~~~-~~~~~~i~l~~~-~e~~~~Rl~~R~~-~~~~~~~~~~~~~~~~~~--~~~ad~vId~~~~~ 178 (204)
T 2if2_A 106 TLFILEASLLV--EKGTY-KNYDKLIVVYAP-YEVCKERAIKRGM-SEEDFERRWKKQMPIEEK--VKYADYVIDNSGSI 178 (204)
T ss_dssp CCEEEECSCST--TTTCG-GGSSEEEEECCC-HHHHHHHHHHTCC-CHHHHHHHHTTSCCHHHH--GGGCSEECCCSSCH
T ss_pred CEEEEEccccc--cCCch-hhCCEEEEEECC-HHHHHHHHHHcCC-CHHHHHHHHHhCCChhHH--HhcCCEEEECCCCH
Confidence 78888875322 01111 223478888875 7888888888864 345555666 22111111 13458888876 78
Q ss_pred HHHHHHHHHHHH
Q psy6613 281 EDACEHIAEYLE 292 (510)
Q Consensus 281 d~A~~eL~~ile 292 (510)
++.++++.++++
T Consensus 179 ~~~~~~i~~~l~ 190 (204)
T 2if2_A 179 EETYKQVKKVYE 190 (204)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888886654
No 276
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=97.11 E-value=0.00091 Score=60.16 Aligned_cols=136 Identities=15% Similarity=0.093 Sum_probs=69.8
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------------hhhhhccc----HHHHHHHHHcCCeEEEEecc
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------------VLTEVQTE----IERVYELASTLQLVVLDCDT 211 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------------Fe~~I~Ts----lesI~~vi~sGKi~ILDID~ 211 (510)
+|++|+||||+.+.|.+ .. ...+......|.. |....... ...+.+.+..| +|+|-.+
T Consensus 10 ~G~~GsGKST~~~~La~~l~-~~~i~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~l~~~--~i~dg~~ 86 (186)
T 3cm0_A 10 LGPPGAGKGTQASRLAQELG-FKKLSTGDILRDHVARGTPLGERVRPIMERGDLVPDDLILELIREELAER--VIFDGFP 86 (186)
T ss_dssp ECCTTSCHHHHHHHHHHHHT-CEEECHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSE--EEEESCC
T ss_pred ECCCCCCHHHHHHHHHHHhC-CeEecHHHHHHHHHHcCChHHHHHHHHHHcCCcCCHHHHHHHHHHHhcCC--EEEeCCC
Confidence 89999999999999876 22 1111111112211 11100011 22344444444 8888666
Q ss_pred CCchhH------hhhc-CCCc-eEEEEeCCCHHHHHHHHHhcC------CCcHHHHHHHH-HHHHH---HHhcCCC-Ccc
Q psy6613 212 INHPSQ------LAKT-NLSP-CIVYLKISSPKVLQRLIKSRG------KSQTRHLNVQM-VAAEK---LAQCPQE-MFD 272 (510)
Q Consensus 212 qg~~lq------~lks-~l~P-ivIFIkPPS~e~L~~rLr~Rg------t~~~e~i~kRL-~aa~e---LEq~~~~-~FD 272 (510)
.+ ..+ .+.. .+.| ++||+..| .+++.+|+..|+ ..+.+.+.+|+ ....+ +...|.. ..+
T Consensus 87 ~~-~~~~~~l~~~l~~~~~~~~~vi~l~~~-~e~~~~R~~~R~~~~~r~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~~ 164 (186)
T 3cm0_A 87 RT-LAQAEALDRLLSETGTRLLGVVLVEVP-EEELVRRILRRAELEGRSDDNEETVRRRLEVYREKTEPLVGYYEARGVL 164 (186)
T ss_dssp CS-HHHHHHHHHHHHHTTEEEEEEEEEECC-HHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred CC-HHHHHHHHHHHHhcCCCCCEEEEEeCC-HHHHHHHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcE
Confidence 55 111 1222 2234 56777765 788888887663 23455566666 22211 2222211 125
Q ss_pred EEEeC-CCHHHHHHHHHHHH
Q psy6613 273 VILDE-NQLEDACEHIAEYL 291 (510)
Q Consensus 273 ~VIvN-DdLd~A~~eL~~il 291 (510)
++|.| .++++.++++.+++
T Consensus 165 ~~id~~~~~~~v~~~i~~~l 184 (186)
T 3cm0_A 165 KRVDGLGTPDEVYARIRAAL 184 (186)
T ss_dssp EEEECCSCHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHh
Confidence 66665 47888888887544
No 277
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=96.99 E-value=0.0015 Score=61.99 Aligned_cols=139 Identities=12% Similarity=0.101 Sum_probs=78.5
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchh----------hhhhhc--------ccHHHHHHHHHcCCeEEEEeccC
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS----------VLTEVQ--------TEIERVYELASTLQLVVLDCDTI 212 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p----------Fe~~I~--------TslesI~~vi~sGKi~ILDID~q 212 (510)
+||+|+||+|..++|.++..-..++.-.--|.- ....+. .-++-|.+.+.+...+|||-=|.
T Consensus 6 ~GpPGsGKgTqa~~La~~~g~~~istGdllR~~i~~~t~lg~~~~~~~~~G~lvpd~iv~~lv~~~l~~~~~~ilDGfPR 85 (206)
T 3sr0_A 6 LGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHGNVIFDGFPR 85 (206)
T ss_dssp ECSTTSSHHHHHHHHHHHHCCEEEEHHHHHHHHHHHTCHHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSCEEEESCCC
T ss_pred ECCCCCCHHHHHHHHHHHHCCeEEcHHHHHHHHHHhcChhhhhHHHHHhcCCcCCHHHHHHHHHHhhccCCceEecCCch
Confidence 899999999999999872211111110001211 000000 23344555556667799998776
Q ss_pred CchhHhhh-------c-CCCc-eEEEEeCCCHHHHHHHHHhcC--------------------------CCcHHHHHHHH
Q psy6613 213 NHPSQLAK-------T-NLSP-CIVYLKISSPKVLQRLIKSRG--------------------------KSQTRHLNVQM 257 (510)
Q Consensus 213 g~~lq~lk-------s-~l~P-ivIFIkPPS~e~L~~rLr~Rg--------------------------t~~~e~i~kRL 257 (510)
. ..... . .+.+ .+|++..| .++|.+|+.+|. .++.+.+.+||
T Consensus 86 t--~~Qa~~l~~~l~~~~~~~~~vi~l~v~-~e~l~~Rl~~R~~~~~~g~~y~~~~~pp~~g~~l~~r~DD~~e~i~~Rl 162 (206)
T 3sr0_A 86 T--VKQAEALDEMLEKKGLKVDHVLLFEVP-DEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKRL 162 (206)
T ss_dssp S--HHHHHHHHHHHHHTTCCCCEEEEEECC-HHHHHHHHHTEEECTTTCCEEETTTBCCCTTCCCBCCGGGSHHHHHHHH
T ss_pred h--HHHHHHHHhhHHHhccccceeeecCCC-HHHHHHHHhCCccccCCCceeeeeccCCCCCceecccCCCCHHHHHHHH
Confidence 5 33222 1 3344 56777775 577777887662 23457788888
Q ss_pred -HH---HHHHHhcCCCCccEEEe--CCCHHHHHHHHHHHHH
Q psy6613 258 -VA---AEKLAQCPQEMFDVILD--ENQLEDACEHIAEYLE 292 (510)
Q Consensus 258 -~a---a~eLEq~~~~~FD~VIv--NDdLd~A~~eL~~ile 292 (510)
.- ..-+...|....-++.+ +.+.++.++++.++|+
T Consensus 163 ~~Y~~~t~pl~~~Y~~~~~l~~Idg~~~~~eV~~~I~~~l~ 203 (206)
T 3sr0_A 163 EVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIG 203 (206)
T ss_dssp HHHHHHTTHHHHHHHTTTCEEEEETTSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEECCCCHHHHHHHHHHHHc
Confidence 22 22344444444444444 4578999999886653
No 278
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=96.86 E-value=1.2e-05 Score=82.02 Aligned_cols=52 Identities=8% Similarity=0.102 Sum_probs=42.6
Q ss_pred EEeeccCCCC--CCCCCCCCccccc--cCCceEEEEeecCCCceEEEEccCCCceeeecCh
Q psy6613 51 RTNVKYDGSI--DDDSPVHGYAVSF--DIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSP 107 (510)
Q Consensus 51 RAlfdY~~~~--D~~iPc~e~~LsF--~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~ 107 (510)
+|+|+|.+.. +. +.+|+| ..||+|.|+++.|++||.|+..+..|+.|+||+.
T Consensus 270 ~a~yd~~~~~~~~~-----e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~ 325 (341)
T 2dyb_A 270 KDLLELTRREFQRE-----DIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWK 325 (341)
T ss_dssp HHHHHHHHHHHTCS-----CEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSC
T ss_pred hhhhhhhhhhcCCC-----cccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecce
Confidence 5788888743 22 346878 8999999999999999999986667789999985
No 279
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=96.81 E-value=0.0036 Score=60.56 Aligned_cols=134 Identities=15% Similarity=0.103 Sum_probs=70.1
Q ss_pred EecCcCChHHHHHHHhcC-C-CCceee-ec-CCCchh---hh----hhhc-ccHHHHHHHHHcCCeEEEEeccCCc-hhH
Q psy6613 151 ITRVTADISLAKRSLMSN-P-SKRAIM-ER-SNSRSS---VL----TEVQ-TEIERVYELASTLQLVVLDCDTINH-PSQ 217 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~-P-~~F~~s-Vs-hTTR~p---Fe----~~I~-TslesI~~vi~sGKi~ILDID~qg~-~lq 217 (510)
+|++|+||||+.+.|.+. . ..+.+. +. ..-|.. |. ..+. .....|...++. ..+|+|.-.-.. ...
T Consensus 10 ~G~pGSGKSTla~~La~~L~~~g~~~i~~~~D~~~~~l~~~~~~~e~~~~~~~~~~i~~~l~~-~~vIiD~~~~~~~~~~ 88 (260)
T 3a4m_A 10 TGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKN-YWVIVDDTNYYNSMRR 88 (260)
T ss_dssp ECCTTSSHHHHHHHHHHHHHHTTCCEEEECTHHHHTTSSSCCGGGHHHHHHHHHHHHHHHHTT-SEEEECSCCCSHHHHH
T ss_pred EcCCCCCHHHHHHHHHHHHHhCCCEEEEECchHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhC-CEEEEeCCcccHHHHH
Confidence 899999999999988762 1 122222 11 000100 10 1111 233556677766 889999643220 011
Q ss_pred hhhc----CCC-ceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh---cCC-CCccEEEeCC---CHHHHHH
Q psy6613 218 LAKT----NLS-PCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQ---CPQ-EMFDVILDEN---QLEDACE 285 (510)
Q Consensus 218 ~lks----~l~-PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq---~~~-~~FD~VIvND---dLd~A~~ 285 (510)
.+.. ... -++||+.. +.+++.+|+..|+....++...++.. ..+. .|. ...+++|.++ ++++.++
T Consensus 89 ~l~~~a~~~~~~~~vi~l~~-~~e~~~~R~~~R~~~~~~~~l~~~~~--~~e~~~~~~~~~~~~~~Id~~~~~~~~ei~~ 165 (260)
T 3a4m_A 89 DLINIAKKYNKNYAIIYLKA-SLDVLIRRNIERGEKIPNEVIKKMYE--KFDEPGKKYKWDEPFLIIDTTKDIDFNEIAK 165 (260)
T ss_dssp HHHHHHHHTTCEEEEEEEEC-CHHHHHHHHHHTTCSSCHHHHHHHHH--HCCCTTSSCGGGCCSEEEETTSCCCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEeC-CHHHHHHHHHhCCCCCCHHHHHHHHH--HhcCccccCCCCCCEEEEeCCCCCCHHHHHH
Confidence 1221 223 35677774 58999999988875433343444411 1111 111 2357888765 4666666
Q ss_pred HHH
Q psy6613 286 HIA 288 (510)
Q Consensus 286 eL~ 288 (510)
+|.
T Consensus 166 ~I~ 168 (260)
T 3a4m_A 166 KLI 168 (260)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 280
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=96.80 E-value=0.002 Score=60.69 Aligned_cols=90 Identities=14% Similarity=0.045 Sum_probs=53.0
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCC----chh------hhhhhc------------ccHHHHHHHHHc--CCeE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNS----RSS------VLTEVQ------------TEIERVYELAST--LQLV 205 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTT----R~p------Fe~~I~------------TslesI~~vi~s--GKi~ 205 (510)
+||+|+||||+.+.|.+ .. +.. + +| |.+ .-..+. .-.+.|...+.+ |+.+
T Consensus 6 ~G~~GsGKsT~a~~La~~lg--~~~-i--~~dd~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~g~~v 80 (223)
T 2xb4_A 6 FGPNGSGKGTQGNLVKDKYS--LAH-I--ESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGW 80 (223)
T ss_dssp ECCTTSCHHHHHHHHHHHHT--CEE-E--EHHHHHHHHTTTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHCTTCE
T ss_pred ECCCCCCHHHHHHHHHHHhC--CeE-E--chHHHHHHHHHcCCHHHHHHHHHHHcCCcCcHHHHHHHHHHHHhcccCCeE
Confidence 89999999999999887 32 111 1 22 332 111110 122346666677 9999
Q ss_pred EEEeccCCc-hhHhhh----c-CCCc-eEEEEeCCCHHHHHHHHHhcC
Q psy6613 206 VLDCDTINH-PSQLAK----T-NLSP-CIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 206 ILDID~qg~-~lq~lk----s-~l~P-ivIFIkPPS~e~L~~rLr~Rg 246 (510)
|+|..+.+. .++.+. . ...| ++||+..| .+++.+|+..|+
T Consensus 81 IlDg~~~~~~~~~~l~~~~~~~~~~~d~vi~l~~~-~e~~~~Rl~~R~ 127 (223)
T 2xb4_A 81 LLDGFPRNTVQAQKLFEALQEKGMKINFVIEILLP-REVAKNRIMGRR 127 (223)
T ss_dssp EEESCCCSHHHHHHHHHHHHHTTCCCCEEEEEECC-HHHHHHHHHTBC
T ss_pred EEeCCcCCHHHHHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHccc
Confidence 999766540 012221 1 3445 45666654 688889988876
No 281
>4hlc_A DTMP kinase, thymidylate kinase; TMK, MRSA, pipiridine, transfera transferase inhibitor complex; HET: T05; 1.55A {Staphylococcus aureus subsp} PDB: 2cck_A 4gfd_A* 4gsy_A* 4hdc_A* 4hej_A* 2ccj_A* 4hld_A* 2ccg_A*
Probab=96.78 E-value=0.014 Score=55.23 Aligned_cols=141 Identities=13% Similarity=0.135 Sum_probs=73.8
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh----hhhhh------------------c-----c-cHHHHHHHHHc
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----VLTEV------------------Q-----T-EIERVYELAST 201 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----Fe~~I------------------~-----T-slesI~~vi~s 201 (510)
=|+-|+||||+++.|.+ ....+.. ..||.| +-+.+ . - -.+.|...+++
T Consensus 8 EG~dGsGKsTq~~~L~~~L~~~~~v---~~~~eP~~t~~g~~ir~~l~~~~~~~~~~~~lLf~a~R~~~~~~~i~p~l~~ 84 (205)
T 4hlc_A 8 EGPEGSGKTTVINEVYHRLVKDYDV---IMTREPGGVPTGEEIRKIVLEGNDMDIRTEAMLFAASRREHLVLKVIPALKE 84 (205)
T ss_dssp ECCTTSCHHHHHHHHHHHHTTTSCE---EEEESSTTCHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHTHHHHHHT
T ss_pred ECCCCCcHHHHHHHHHHHHHCCCCE---EEeeCCCCChHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 59999999999888776 2222221 124444 00000 0 1 12335667899
Q ss_pred CCeEEEEecc------CC----chhHhhh---c----CCCc-eEEEEeCCCHHHHHHHHHhcCCCcH------HHHHHHH
Q psy6613 202 LQLVVLDCDT------IN----HPSQLAK---T----NLSP-CIVYLKISSPKVLQRLIKSRGKSQT------RHLNVQM 257 (510)
Q Consensus 202 GKi~ILDID~------qg----~~lq~lk---s----~l~P-ivIFIkPPS~e~L~~rLr~Rgt~~~------e~i~kRL 257 (510)
|++||.|=-. || .....++ . .+.| ++||+.. +.++..+|+..|+...+ .+..+++
T Consensus 85 g~~Vi~DRy~~S~~ayq~~~~~~~~~~~~~l~~~~~~~~~PDl~i~Ld~-~~e~~~~Ri~~r~~~~dr~e~~~~~f~~~v 163 (205)
T 4hlc_A 85 GKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNV-SAEVGRERIIKNSRDQNRLDQEDLKFHEKV 163 (205)
T ss_dssp TCEEEEECCHHHHHHHTTTTTSSCHHHHHHHHHHHHTTCCCSEEEEEEC-CHHHHHHHHHC-------CCHHHHHHHHHH
T ss_pred CCEEEecCcccchHHHHhccccchHHHHHHHHHHHhcCCCCCEEeeeCC-CHHHHHHHHHhcCCcccchhccCHHHHHHH
Confidence 9999999432 22 0111121 1 3456 4566655 47788888877664321 1234455
Q ss_pred -HHHHHHHhcCCCCccEEEeCCCHHHHHHHHHHHHHHHH
Q psy6613 258 -VAAEKLAQCPQEMFDVILDENQLEDACEHIAEYLEAYW 295 (510)
Q Consensus 258 -~aa~eLEq~~~~~FD~VIvNDdLd~A~~eL~~ileai~ 295 (510)
++=.++...++..|-.|=-|.++|+..+++.+.|..++
T Consensus 164 ~~~Y~~l~~~~~~~~~~IDa~~~~e~V~~~i~~~i~~~L 202 (205)
T 4hlc_A 164 IEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIKYL 202 (205)
T ss_dssp HHHHHHHHHSCCTTEEEEETTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 33345655554443222124578888888876665543
No 282
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=96.73 E-value=0.015 Score=53.41 Aligned_cols=73 Identities=21% Similarity=0.188 Sum_probs=41.9
Q ss_pred CCceEEEEeCCCHHHHHHHHHh----cCCCcHHHHHHHH-HHHHHH----HhcCCCCccEEEeCCC-HHHHHHHHHHHHH
Q psy6613 223 LSPCIVYLKISSPKVLQRLIKS----RGKSQTRHLNVQM-VAAEKL----AQCPQEMFDVILDENQ-LEDACEHIAEYLE 292 (510)
Q Consensus 223 l~PivIFIkPPS~e~L~~rLr~----Rgt~~~e~i~kRL-~aa~eL----Eq~~~~~FD~VIvNDd-Ld~A~~eL~~ile 292 (510)
+.-.+||+-++....+.++++. +|.. ...+..++ ...... ...+....|+||.|++ ...+++.|...|.
T Consensus 124 ~~d~~i~ld~~~~~~~~r~l~r~~~~~g~t-~~~~~~~~~~~~~~~~~~~~~~~~~~aD~ii~~~~~~~~~~~~~~~~i~ 202 (211)
T 3asz_A 124 LMDLKVFVDADADERFIRRLKRDVLERGRS-LEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEMLAAKAL 202 (211)
T ss_dssp TCSEEEEEECCHHHHHHHHHHHHHHHSCCC-HHHHHHHHHHTHHHHHHHTTGGGGGGCSEEEESTTSCHHHHHHHHHHHT
T ss_pred hcCEEEEEeCCHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHhhhhhHHHhcccchhcCeEEEeCCCcchHHHHHHHHHHH
Confidence 4457899999988878777653 3543 22233333 211111 1122356799999875 4566666665555
Q ss_pred HHHH
Q psy6613 293 AYWR 296 (510)
Q Consensus 293 ai~~ 296 (510)
.++.
T Consensus 203 ~~~~ 206 (211)
T 3asz_A 203 ARLA 206 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5553
No 283
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=96.71 E-value=0.0023 Score=54.34 Aligned_cols=59 Identities=20% Similarity=0.271 Sum_probs=41.1
Q ss_pred hccCCCeeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCC----CceEEEEccCCCceeeecChhHH
Q psy6613 41 ARAKNVAFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDS----NWWIGRLVKEGSECGFIPSPVKL 110 (510)
Q Consensus 41 a~~k~~~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~----~WWqar~v~~~~~~GlIPS~~~~ 110 (510)
++..+..+|. +..+|.+ +++.+|++++||++-|+.+.|+ .||-.+. ++..||+|+..+.
T Consensus 12 ~~y~~~~LY~-~t~~~~~-------tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdt---gg~~GyvPs~yLe 74 (92)
T 1ug1_A 12 ARYPPEKLFQ-AERNFNA-------AQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN---GVTKGFVYSSFLK 74 (92)
T ss_dssp HHSCGGGEEE-ESSCCCC-------CSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC---SSSEEEEEGGGEE
T ss_pred hhCCchheEE-eccCcCC-------CCceeeeecCCCEEEEEecCCCCCCCcceEEEC---CCcEEeeEhhhce
Confidence 4455555544 5555555 3456799999999999999765 3443332 6899999998763
No 284
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=96.71 E-value=0.012 Score=56.75 Aligned_cols=91 Identities=14% Similarity=0.155 Sum_probs=48.1
Q ss_pred HHcCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHH---h-cCCCcHHHHHHHH-HHHH-HHHh---cCCC
Q psy6613 199 ASTLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIK---S-RGKSQTRHLNVQM-VAAE-KLAQ---CPQE 269 (510)
Q Consensus 199 i~sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr---~-Rgt~~~e~i~kRL-~aa~-eLEq---~~~~ 269 (510)
+..+..||+|-.-.+ .-++. -..+.|||..|.-..++++.+ . +...+.+++..+| ..-. +... -+..
T Consensus 142 ~a~~~~~V~~gr~~~--~~v~~--~~~~~ifl~A~~e~r~~R~~~~l~~~~~~~~~~~~~~~i~~rd~~~~~r~~~pl~~ 217 (252)
T 4e22_A 142 FREAPGLIADGRDMG--TIVFP--DAPVKIFLDASSQERAHRRMLQLQERGFNVNFERLLAEIQERDNRDRNRSVAPLVP 217 (252)
T ss_dssp TCCSSCEEEEESSCC--CCCST--TCSEEEEEECCHHHHHHHHHHHHHHHTCCCCHHHHHHHHC------------CCCC
T ss_pred HhhCCCEEEEeceec--eeecC--CCCEEEEEECCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhhhccccchhc
Confidence 344667888765444 11111 136889999975555555443 1 3334455666666 2111 1111 1112
Q ss_pred Ccc-EEEeCC--CHHHHHHHHHHHHHH
Q psy6613 270 MFD-VILDEN--QLEDACEHIAEYLEA 293 (510)
Q Consensus 270 ~FD-~VIvND--dLd~A~~eL~~ilea 293 (510)
.-| ++|.|+ +++++++++.+++..
T Consensus 218 ~~d~~~Idts~~~~eev~~~I~~~i~~ 244 (252)
T 4e22_A 218 AADALVLDSTSMSIEQVIEQALAYAQR 244 (252)
T ss_dssp CTTEEEEECSSSCHHHHHHHHHHHHHH
T ss_pred cCCeEEEECcCCCHHHHHHHHHHHHHH
Confidence 335 777777 589999988866654
No 285
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=96.70 E-value=0.0011 Score=67.87 Aligned_cols=59 Identities=7% Similarity=-0.092 Sum_probs=44.7
Q ss_pred EecCcCChHHHHHHHhc-CCC--------CceeeecCCCchhhh-----------------hhhc------ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPS--------KRAIMERSNSRSSVL-----------------TEVQ------TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~--------~F~~sVshTTR~pFe-----------------~~I~------TslesI~~v 198 (510)
+||+|+|||+|...|.+ .+. .+...++.||++|-. +.+. .....|.++
T Consensus 9 ~GptgsGKt~la~~La~~~~~~iis~Ds~QvYr~~~igTakp~~~E~~gvphhlid~~~~~e~~s~~~F~~~a~~~i~~i 88 (322)
T 3exa_A 9 VGPTAVGKTKTSVMLAKRLNGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLATPLITEI 88 (322)
T ss_dssp ECCTTSCHHHHHHHHHHTTTEEEEECCGGGGBTTCCTTTTCCCHHHHTTCCEESSSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ECCCcCCHHHHHHHHHHhCccceeecCcccceeeeeecCCCCCHHHHcCCCEEEeccCChhhhccHHHHHHHHHHHHHHH
Confidence 89999999999999988 553 134467889998811 1111 567889999
Q ss_pred HHcCCeEEEEe
Q psy6613 199 ASTLQLVVLDC 209 (510)
Q Consensus 199 i~sGKi~ILDI 209 (510)
.+.|+++||--
T Consensus 89 ~~~gk~pIlVG 99 (322)
T 3exa_A 89 HERGRLPFLVG 99 (322)
T ss_dssp HHTTCEEEEES
T ss_pred HhCCCcEEEEc
Confidence 99999999843
No 286
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=96.69 E-value=0.0046 Score=60.15 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=62.8
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh-----------h----hhhhc-ccHHHHHHHH---HcCCeEEEEec
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS-----------V----LTEVQ-TEIERVYELA---STLQLVVLDCD 210 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p-----------F----e~~I~-TslesI~~vi---~sGKi~ILDID 210 (510)
+|++|+||||+.++|.+ .+. +.+.-....|.. + +..+. .-.+.+...+ ..|+.+|+|..
T Consensus 8 ~G~~GsGKST~a~~L~~~~~~-~~~i~~D~~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~vi~d~~ 86 (301)
T 1ltq_A 8 IGCPGSGKSTWAREFIAKNPG-FYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQFDTAKSILYGGDSVKGVIISDT 86 (301)
T ss_dssp ECCTTSSHHHHHHHHHHHSTT-EEEECHHHHHHHHTTSCCCC---CCHHHHHHHHHHHHHHHHHHTTSCTTCCEEEECSC
T ss_pred ECCCCCCHHHHHHHHHHhCCC-cEEecccHHHHHhccCCcccccccchhhhhHHHHHHHHHHHHHHhhccCCCEEEEeCC
Confidence 89999999999999987 432 322211111111 0 11111 1234566677 88999999987
Q ss_pred cCCch-hHhhh----c-CCCceEEEEeCCCHHHHHHHHHhcCC--CcHHHHHHHHHHHH
Q psy6613 211 TINHP-SQLAK----T-NLSPCIVYLKISSPKVLQRLIKSRGK--SQTRHLNVQMVAAE 261 (510)
Q Consensus 211 ~qg~~-lq~lk----s-~l~PivIFIkPPS~e~L~~rLr~Rgt--~~~e~i~kRL~aa~ 261 (510)
..... .+.++ . ....++||+.+ +.+++.+|+..|+. .+.+.+.+++..-+
T Consensus 87 ~~~~~~~~~l~~~~~~~~~~~~~i~l~~-~~e~~~~R~~~R~~~~~~~e~i~~~~~~~~ 144 (301)
T 1ltq_A 87 NLNPERRLAWETFAKEYGWKVEHKVFDV-PWTELVKRNSKRGTKAVPIDVLRSMYKSMR 144 (301)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECCC-CHHHHHHHHHHCGGGCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEC-CHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 64410 11122 1 12236788876 78999999988863 33445555554333
No 287
>3hjn_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynth nucleotide-binding, transferase, structural genomics; HET: ADP TYD; 2.10A {Thermotoga maritima}
Probab=96.58 E-value=0.0029 Score=59.36 Aligned_cols=138 Identities=13% Similarity=0.076 Sum_probs=73.6
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchh----hh----------------------hhhcccHHHHHHHHHcCCe
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS----VL----------------------TEVQTEIERVYELASTLQL 204 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p----Fe----------------------~~I~TslesI~~vi~sGKi 204 (510)
=|+-|+||||..+.|.++-..-+..+ .+||.| +- +......+.|...+++|++
T Consensus 6 EG~DGsGKsTq~~~L~~~L~~~g~~v-~~treP~~t~~~~~ir~~l~~~~~~~~~~~ll~~a~r~~~~~~I~~~L~~g~~ 84 (197)
T 3hjn_A 6 EGIDGSGKSTQIQLLAQYLEKRGKKV-ILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTEIKQYLSEGYA 84 (197)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHTTCCE-EEEESSCSSHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCcE-EEEECCCCCcHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 49999999998887765110111112 134444 00 0001344668888899999
Q ss_pred EEEEeccCCc----------hhHhhh---c----CCCce-EEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HHHHHHHh
Q psy6613 205 VVLDCDTINH----------PSQLAK---T----NLSPC-IVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VAAEKLAQ 265 (510)
Q Consensus 205 ~ILDID~qg~----------~lq~lk---s----~l~Pi-vIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~aa~eLEq 265 (510)
||.|=-..++ ....+. . .+.|- +||+.. +.++..+|...++.....+..+++ ++=.++..
T Consensus 85 Vi~DRy~~S~~ayq~~~~~~~~~~i~~l~~~~~~~~~PDl~i~Ld~-~~e~~~~R~~~~dr~e~~ef~~rv~~~y~~la~ 163 (197)
T 3hjn_A 85 VLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDV-DVETALKRKGELNRFEKREFLERVREGYLVLAR 163 (197)
T ss_dssp EEEESCHHHHHHHHTTTTCSCHHHHHHHHHHHHTTCCCSEEEEEEC-CHHHHHHHC---CTTCCHHHHHHHHHHHHHHHH
T ss_pred EEecccchHHHHHHHhccCCCHHHHHHHHhhhhcCCCCCceeecCc-ChHHHHHhCcCcCccccHHHHHHHHHHHHHHHH
Confidence 9999432110 011111 1 34564 455554 467766676555443334566666 44456666
Q ss_pred cCCCCccEEEeC--CCHHHHHHHHHHHHH
Q psy6613 266 CPQEMFDVILDE--NQLEDACEHIAEYLE 292 (510)
Q Consensus 266 ~~~~~FD~VIvN--DdLd~A~~eL~~ile 292 (510)
.++.. +++++ .++++..+++.+.|+
T Consensus 164 ~~~~~--~~~IDa~~~~eeV~~~I~~~i~ 190 (197)
T 3hjn_A 164 EHPER--IVVLDGKRSIEEIHRDVVREVK 190 (197)
T ss_dssp HCTTT--EEEEETTSCHHHHHHHHHHHHS
T ss_pred hCCCC--EEEEcCCCCHHHHHHHHHHHHH
Confidence 55443 34443 467777777775554
No 288
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=96.56 E-value=0.0013 Score=70.07 Aligned_cols=51 Identities=14% Similarity=0.136 Sum_probs=43.6
Q ss_pred eeEEEEeeccCCCCCCCCCCCCccccccCCceEEEEeecCCCceEEEEccCCCceeeecChhH
Q psy6613 47 AFAVRTNVKYDGSIDDDSPVHGYAVSFDIHEFLHIKEKYDSNWWIGRLVKEGSECGFIPSPVK 109 (510)
Q Consensus 47 ~~~VRAlfdY~~~~D~~iPc~e~~LsF~~GDiL~V~~~~d~~WWqar~v~~~~~~GlIPS~~~ 109 (510)
...|+|+|||.+. ++++++||++.+++..+++||..+. .+|..|++|+-.+
T Consensus 283 ~~~V~alcdy~~~----------e~~i~kge~~~L~~ns~~~~W~V~~--~~G~~~~vPavcf 333 (450)
T 3r6n_A 283 PIILRALCDYKQD----------QKIVHKGDECILKDNNERSKWYVTG--PGGVDMLVPSVGL 333 (450)
T ss_dssp CCEEEESSCEEET----------TEEECTTCEEEEEECSSSSEEEEEC--SSSCCEEEEGGGE
T ss_pred CceEEEeccccCC----------eeeEecCCEEEEecCCCCCceEEec--CCCCeeccceeEE
Confidence 5789999999963 5899999999999999999999775 4678899997544
No 289
>1q3t_A Cytidylate kinase; nucleotide monophosphate kinase, CMP kinase, transferase; NMR {Streptococcus pneumoniae} SCOP: c.37.1.1
Probab=96.54 E-value=0.058 Score=50.90 Aligned_cols=89 Identities=19% Similarity=0.243 Sum_probs=49.9
Q ss_pred HHcCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHH---HhcC-CCcHHHHHHHHHHHHHHHh------cCC
Q psy6613 199 ASTLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLI---KSRG-KSQTRHLNVQMVAAEKLAQ------CPQ 268 (510)
Q Consensus 199 i~sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rL---r~Rg-t~~~e~i~kRL~aa~eLEq------~~~ 268 (510)
+..|..||+|.-.-+ ..++.. .-++|||..|.-..+++++ ..|+ ..+.+++..++..-+.... .|.
T Consensus 132 ~~~~~~~v~~g~~~~--~~~l~~--~d~vi~L~a~~e~~~~R~~~~~~~R~~~~~~e~~~~~i~~R~~~~~~~~~~p~~~ 207 (236)
T 1q3t_A 132 IAQQGGIVMDGRDIG--TVVLPQ--AELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHRETSPLKQ 207 (236)
T ss_dssp HHTTSCEEEECSSCS--SSSGGG--CSEEEEEECCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCSSSCCSC
T ss_pred hcccCCEEEECCcch--hhhccC--CCEEEEEECCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhhhhhcccccccc
Confidence 456778888754332 112221 2478999986444444432 4666 3345556666632222111 221
Q ss_pred CCcc-EEEeCC--CHHHHHHHHHHHHH
Q psy6613 269 EMFD-VILDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 269 ~~FD-~VIvND--dLd~A~~eL~~ile 292 (510)
.-| ++|.|+ +++++++++.++++
T Consensus 208 -~~d~~vId~~~~s~eev~~~I~~~l~ 233 (236)
T 1q3t_A 208 -AEDAVYLDTTGLNIQEVVEKIKAEAE 233 (236)
T ss_dssp -CTTCEEEECSSCCHHHHHHHHHHHHH
T ss_pred -cCCEEEEcCCCCCHHHHHHHHHHHHH
Confidence 124 888876 68999999886664
No 290
>2h92_A Cytidylate kinase; rossmann fold, transferase; HET: C5P PG4; 2.30A {Staphylococcus aureus}
Probab=96.54 E-value=0.028 Score=51.80 Aligned_cols=88 Identities=18% Similarity=0.200 Sum_probs=49.9
Q ss_pred HHHcCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHH----HhcCCC-cHHHHHHHHHHHH--HHH----hc
Q psy6613 198 LASTLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLI----KSRGKS-QTRHLNVQMVAAE--KLA----QC 266 (510)
Q Consensus 198 vi~sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rL----r~Rgt~-~~e~i~kRL~aa~--eLE----q~ 266 (510)
.+..|..||+|..-.+ ..+++ ...++|||..| .+++.+|+ ..||.. +.+++..++.+.. ... ..
T Consensus 114 ~~~~~~~~vi~g~~~~--~~~~~--~~~~vi~l~a~-~e~~~~R~~~~~~~r~~~~~~e~~~~~~~~r~~~d~~r~~~~~ 188 (219)
T 2h92_A 114 ELAAEKGIVMDGRDIG--TVVLP--DADLKVYMIAS-VEERAERRYKDNQLRGIESNFEDLKRDIEARDQYDMNREISPL 188 (219)
T ss_dssp HHHTTCCEEEEESSCC--CCCCT--TCSEEEEEECC-HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHCSSSCS
T ss_pred HhccCCcEEEEcCCcc--ceecC--CCCEEEEEECC-HHHHHHHHHHHHHhcCcccCHHHHHHHHHHHHHhhhhhhcccc
Confidence 3456778999874222 11222 23578888875 55555554 256642 4556666663222 111 22
Q ss_pred CCCCcc-EEEeCC--CHHHHHHHHHHHH
Q psy6613 267 PQEMFD-VILDEN--QLEDACEHIAEYL 291 (510)
Q Consensus 267 ~~~~FD-~VIvND--dLd~A~~eL~~il 291 (510)
|.. .| ++|.|+ +++++++++.+++
T Consensus 189 ~~~-~d~~~Id~~~~~~ee~~~~I~~~l 215 (219)
T 2h92_A 189 RKA-DDAVTLDTTGKSIEEVTDEILAMV 215 (219)
T ss_dssp CCC-TTCEEEECTTCCHHHHHHHHHHHH
T ss_pred ccC-CCeEEEECCCCCHHHHHHHHHHHH
Confidence 322 45 888876 6999998888555
No 291
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=96.54 E-value=0.0019 Score=65.98 Aligned_cols=59 Identities=7% Similarity=-0.016 Sum_probs=44.5
Q ss_pred EecCcCChHHHHHHHhc-CCC--------CceeeecCCCchhhhhh-----------------hc------ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPS--------KRAIMERSNSRSSVLTE-----------------VQ------TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~--------~F~~sVshTTR~pFe~~-----------------I~------TslesI~~v 198 (510)
+||+|+|||+|...|.+ .+. .+...+++||++|-.++ +. .....|.++
T Consensus 16 ~GptgsGKt~la~~La~~~~~~iis~Ds~qvY~~~~igTakp~~~E~~~v~hhlid~~~~~e~~s~~~f~~~a~~~i~~i 95 (316)
T 3foz_A 16 MGPTASGKTALAIELRKILPVELISVDSALIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADI 95 (316)
T ss_dssp ECCTTSCHHHHHHHHHHHSCEEEEECCTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ECCCccCHHHHHHHHHHhCCCcEEecccccccccccccCCCCCHHHHcCCCEEEeccCCccccccHHHHHHHHHHHHHHH
Confidence 89999999999999987 553 23445688999981111 11 566789999
Q ss_pred HHcCCeEEEEe
Q psy6613 199 ASTLQLVVLDC 209 (510)
Q Consensus 199 i~sGKi~ILDI 209 (510)
.+.|+++||--
T Consensus 96 ~~~g~~pilVG 106 (316)
T 3foz_A 96 TAAGRIPLLVG 106 (316)
T ss_dssp HHTTCEEEEEE
T ss_pred HhCCCcEEEEc
Confidence 99999999865
No 292
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=96.52 E-value=0.0013 Score=59.20 Aligned_cols=130 Identities=15% Similarity=0.025 Sum_probs=64.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCch-------h-hhhh---hc--ccHHHHHHHHHcCCeEEEEeccCCch-
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRS-------S-VLTE---VQ--TEIERVYELASTLQLVVLDCDTINHP- 215 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~-------p-Fe~~---I~--TslesI~~vi~sGKi~ILDID~qg~~- 215 (510)
+|++|+||||+.+.|.+ ..-.|. ..-.--+. . |... +. .....+.+++.... +|++... +.+
T Consensus 8 ~G~~GsGKsT~a~~La~~lg~~~i-d~D~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~vi~~g~-~~v~ 84 (184)
T 2iyv_A 8 VGLPGSGKSTIGRRLAKALGVGLL-DTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHD-GVLSLGG-GAVT 84 (184)
T ss_dssp ECSTTSSHHHHHHHHHHHHTCCEE-EHHHHHHHHHSSCHHHHHHHHCHHHHHHHHHHHHHHHHHHCC-SEEECCT-TGGG
T ss_pred ECCCCCCHHHHHHHHHHHcCCCEE-eCchHHHHHcCCCHHHHHHHhChHHHHHHHHHHHHHHHhcCC-eEEecCC-cEEc
Confidence 99999999999998876 221111 10000000 0 1100 00 12234555555444 4444321 101
Q ss_pred ----hHhhhcCCCceEEEEeCCCHHHHHHHHHhcCC---Cc---HHHHHHHH-HHHHHHHhcCCCCccEEEeCC--CHHH
Q psy6613 216 ----SQLAKTNLSPCIVYLKISSPKVLQRLIKSRGK---SQ---TRHLNVQM-VAAEKLAQCPQEMFDVILDEN--QLED 282 (510)
Q Consensus 216 ----lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt---~~---~e~i~kRL-~aa~eLEq~~~~~FD~VIvND--dLd~ 282 (510)
.+.++ .-.+|||.. +.+++.+|+..|+. .. ..+....+ ...... |....|++|.|+ ++++
T Consensus 85 ~~~~~~~l~---~~~vV~L~~-~~e~~~~Rl~~r~~r~~~~~~~~~~~i~~~~~~r~~~---~~~~~~~~Idt~~~s~ee 157 (184)
T 2iyv_A 85 SPGVRAALA---GHTVVYLEI-SAAEGVRRTGGNTVRPLLAGPDRAEKYRALMAKRAPL---YRRVATMRVDTNRRNPGA 157 (184)
T ss_dssp SHHHHHHHT---TSCEEEEEC-CHHHHHHHTTCCCCCSSTTSCCHHHHHHHHHHHHHHH---HHHHCSEEEECSSSCHHH
T ss_pred CHHHHHHHc---CCeEEEEeC-CHHHHHHHHhCCCCCCCccCCCHHHHHHHHHHHHHHH---HhccCCEEEECCCCCHHH
Confidence 11222 347888887 57888888876642 11 11222222 211221 223468999876 5888
Q ss_pred HHHHHHHH
Q psy6613 283 ACEHIAEY 290 (510)
Q Consensus 283 A~~eL~~i 290 (510)
+++++.++
T Consensus 158 ~~~~I~~~ 165 (184)
T 2iyv_A 158 VVRHILSR 165 (184)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 88887733
No 293
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=96.45 E-value=0.003 Score=57.20 Aligned_cols=96 Identities=13% Similarity=-0.046 Sum_probs=50.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCceee---ecCCCchh-hhhhhc-----ccHH----HHHHHHHcCCeEEEEeccCCchh
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIM---ERSNSRSS-VLTEVQ-----TEIE----RVYELASTLQLVVLDCDTINHPS 216 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~s---VshTTR~p-Fe~~I~-----Tsle----sI~~vi~sGKi~ILDID~qg~~l 216 (510)
+||+|+||||+.+.|.. ......+. +....+.. +.+... +-.+ .+......|..+|+|. +.+ +.
T Consensus 8 ~G~~GaGKSTl~~~L~~~~~g~~~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ild~-~~~-~~ 85 (189)
T 2bdt_A 8 TGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDLTVNFLLAQNDVVLDY-IAF-PD 85 (189)
T ss_dssp ECSTTSSHHHHHHHHHHHSSSEEEEEHHHHHTTCCTTCCCGGGCHHHHHHHHHHHHHHHHHHHHTTCEEEEES-CCC-HH
T ss_pred ECCCCCcHHHHHHHHhcccCCeEEEcccchhhhhccccccCccchhHHHHHHHHHHHHHHHHHhcCCcEEEee-ccC-HH
Confidence 89999999999999976 33211111 00000000 000000 1111 2333456788999997 323 11
Q ss_pred H------hhhc-CCC-ceEEEEeCCCHHHHHHHHHhcCCC
Q psy6613 217 Q------LAKT-NLS-PCIVYLKISSPKVLQRLIKSRGKS 248 (510)
Q Consensus 217 q------~lks-~l~-PivIFIkPPS~e~L~~rLr~Rgt~ 248 (510)
. .+++ ... .+.+++..++.++|.+|++.|+.+
T Consensus 86 ~~~~~~~~~~s~g~~~~~~~i~L~~~~e~l~~R~~~r~~d 125 (189)
T 2bdt_A 86 EAEALAQTVQAKVDDVEIRFIILWTNREELLRRDALRKKD 125 (189)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEEEECCHHHHHHHTTTSCC-
T ss_pred HHHHHHHHHHhcccCCCeEEEEEeCCHHHHHHHHHhcccc
Confidence 1 1111 111 444455668999999999888654
No 294
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=96.45 E-value=0.0063 Score=54.40 Aligned_cols=89 Identities=13% Similarity=0.219 Sum_probs=46.5
Q ss_pred cCCeEEEEeccCCchhHh---h-hc---CCCc-eEEEEeCCCHHHHHHHHHhcCC------CcHHHHHHHHHHH----HH
Q psy6613 201 TLQLVVLDCDTINHPSQL---A-KT---NLSP-CIVYLKISSPKVLQRLIKSRGK------SQTRHLNVQMVAA----EK 262 (510)
Q Consensus 201 sGKi~ILDID~qg~~lq~---l-ks---~l~P-ivIFIkPPS~e~L~~rLr~Rgt------~~~e~i~kRL~aa----~e 262 (510)
.|..+|+|--+-. ... + +. ...| ++||+.. +.+++.+|+..|+. .+.+.+.+++..- ..
T Consensus 85 ~~~~vi~dg~~~~--~~~~~~~~~~~~~~~~~~~~i~l~~-~~e~~~~R~~~R~~~~~r~~~~~~~~~~~~~~~~~~~~~ 161 (196)
T 1tev_A 85 QKNKFLIDGFPRN--QDNLQGWNKTMDGKADVSFVLFFDC-NNEICIERCLERGKSSGRSDDNRESLEKRIQTYLQSTKP 161 (196)
T ss_dssp TCCEEEEESCCCS--HHHHHHHHHHHTTTCEEEEEEEEEC-CHHHHHHHHHHHHHTSSCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCCCC--HHHHHHHHHHhcccCCCCEEEEEEC-CHHHHHHHHHcccccCCCCCCCHHHHHHHHHHHHHhHHH
Confidence 5889999965544 221 1 11 1223 5788876 46777777765531 2344455555211 11
Q ss_pred HHhcCCCCccE-EEeCC-CHHHHHHHHHHHHH
Q psy6613 263 LAQCPQEMFDV-ILDEN-QLEDACEHIAEYLE 292 (510)
Q Consensus 263 LEq~~~~~FD~-VIvND-dLd~A~~eL~~ile 292 (510)
+...|...-++ +|.++ ++++.++++.++|.
T Consensus 162 ~~~~y~~~~~~~~id~~~~~~~v~~~i~~~l~ 193 (196)
T 1tev_A 162 IIDLYEEMGKVKKIDASKSVDEVFDEVVQIFD 193 (196)
T ss_dssp HHHHHHHTTCEEEEETTSCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEECCCCHHHHHHHHHHHHH
Confidence 11122112244 55443 57888888886554
No 295
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=96.40 E-value=0.0023 Score=56.66 Aligned_cols=65 Identities=11% Similarity=0.088 Sum_probs=38.0
Q ss_pred ceEEEEeCCCHHHHHHHHH--hc-C---CCcHHHHHHHH-HHHHHHHhcCCCCccEEEeCC--CHHHHHHHHHHHH
Q psy6613 225 PCIVYLKISSPKVLQRLIK--SR-G---KSQTRHLNVQM-VAAEKLAQCPQEMFDVILDEN--QLEDACEHIAEYL 291 (510)
Q Consensus 225 PivIFIkPPS~e~L~~rLr--~R-g---t~~~e~i~kRL-~aa~eLEq~~~~~FD~VIvND--dLd~A~~eL~~il 291 (510)
-++|||..| .+++.+|+. .| + ....+....++ ..-.+.+..|.. .|++|.|+ +++++++++..++
T Consensus 95 ~~~i~l~~~-~e~~~~R~~~~~r~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Id~~~~~~~~~~~~i~~~l 168 (173)
T 1e6c_A 95 GTVVYLFAP-AEELALRLQASLQAHQRPTLTGRPIAEEMEAVLREREALYQD-VAHYVVDATQPPAAIVCELMQTM 168 (173)
T ss_dssp SEEEEEECC-HHHHHHHHHHHHCSCCCCCTTHHHHHHHHHHHHHHHHHHHHH-HCSEEEETTSCHHHHHHHHHHHT
T ss_pred CeEEEEECC-HHHHHHHHhhccCCCCCCcCCCCCHHHHHHHHHHHHHHHHHh-CcEEEECCCCCHHHHHHHHHHHh
Confidence 378888875 677778887 66 2 12223334445 222222222223 68899876 6888888887444
No 296
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=96.39 E-value=0.013 Score=52.78 Aligned_cols=142 Identities=12% Similarity=0.027 Sum_probs=69.0
Q ss_pred CCeE--EecCcCChHHHHHHHhcCCCCceeeec---------CCCchhh--hhhh-c-ccHHHH----HHHHHcCCeEEE
Q psy6613 147 GMII--ITRVTADISLAKRSLMSNPSKRAIMER---------SNSRSSV--LTEV-Q-TEIERV----YELASTLQLVVL 207 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~~P~~F~~sVs---------hTTR~pF--e~~I-~-TslesI----~~vi~sGKi~IL 207 (510)
+.++ +||+|+||||+.+.|...+..=.+.+. ..+...+ +... . +-.+.+ ......|..+++
T Consensus 9 g~~i~l~G~~GsGKSTl~~~La~~~~~g~i~i~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~ 88 (191)
T 1zp6_A 9 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIMQIAADVAGRYAKEGYFVIL 88 (191)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHHHHTCCSSCCCTTSSSHHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CeEEEEECCCCCCHHHHHHHHHhccCCCeEEEcccchhhhhhcccccCCccchhhhhHHHHHHHHHHHHHHhccCCeEEE
Confidence 4444 999999999999988874321111111 0000110 0000 0 111222 122456777888
Q ss_pred EeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcH--HHHHHHHHHHHHHHhcCCCCc-cEEEe--CCCHHH
Q psy6613 208 DCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQT--RHLNVQMVAAEKLAQCPQEMF-DVILD--ENQLED 282 (510)
Q Consensus 208 DID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~--e~i~kRL~aa~eLEq~~~~~F-D~VIv--NDdLd~ 282 (510)
|.-.....+..++..-.++.++....+.+++..|+..|+.... ..... ...+.+...+ .| +++|. |.++++
T Consensus 89 ~~~~~~~~l~~~~~~~~~~~~ls~~~~~~v~~~R~~~r~~~~lld~~~~~--~~~~~~~~l~--~~~~~~i~t~~~~~~~ 164 (191)
T 1zp6_A 89 DGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCLDRGGDSLSDPLVVA--DLHSQFADLG--AFEHHVLPVSGKDTDQ 164 (191)
T ss_dssp CSCCCTTTTHHHHTTCSCEEEEEEECCHHHHHHHHHTTCTTSCCCHHHHH--HHHHHTTCCG--GGGGGEEECTTCCTTT
T ss_pred eccCcHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHhcCCCccCCHHHHH--HHHHHHhccC--cccccEEECCCCCHHH
Confidence 7522210022222112244455666788999999887754321 11111 1122233322 23 34554 357888
Q ss_pred HHHHHHHHHH
Q psy6613 283 ACEHIAEYLE 292 (510)
Q Consensus 283 A~~eL~~ile 292 (510)
+++++.+++.
T Consensus 165 ~~~~i~~~l~ 174 (191)
T 1zp6_A 165 ALQSAINALQ 174 (191)
T ss_dssp TTTTTHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888886654
No 297
>3ake_A Cytidylate kinase; CMP kinase, CMP complex, open conformation, nucleotide metab transferase; HET: C5P; 1.50A {Thermus thermophilus} PDB: 3akc_A* 3akd_A*
Probab=96.39 E-value=0.058 Score=48.85 Aligned_cols=84 Identities=12% Similarity=0.145 Sum_probs=47.4
Q ss_pred CeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcC-CCCcc-EEEeCC--
Q psy6613 203 QLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCP-QEMFD-VILDEN-- 278 (510)
Q Consensus 203 Ki~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~-~~~FD-~VIvND-- 278 (510)
..||+|...-. ..+. ...-++|||..| .+++.+|+..|...+.+++..++..-......+ ...-| ++|.|+
T Consensus 119 ~~~vi~g~~~~---~~~~-~~~d~~i~l~a~-~e~~~~R~~~r~~~~~~~~~~~~~~R~~~~~~~~~~~ad~~~Id~~~~ 193 (208)
T 3ake_A 119 PPFVAEGRDMG---TAVF-PEAAHKFYLTAS-PEVRAWRRARERPQAYEEVLRDLLRRDERDKAQSAPAPDALVLDTGGM 193 (208)
T ss_dssp SCEEEEESSCC---CCCC-TTCSEEEEEECC-HHHHHHHHHHTSSSCHHHHHHHHHHHHHTC--CCCCCTTCEEEETTTS
T ss_pred CCEEEEcccee---EEEe-cCCcEEEEEECC-HHHHHHHHHhhcccCHHHHHHHHHHHHHHHhhcccCCCCEEEEECCCC
Confidence 46777765322 1111 123478899876 566666666665444555555553322222111 23455 888887
Q ss_pred CHHHHHHHHHHHH
Q psy6613 279 QLEDACEHIAEYL 291 (510)
Q Consensus 279 dLd~A~~eL~~il 291 (510)
+++++++++.+++
T Consensus 194 ~~ee~~~~I~~~~ 206 (208)
T 3ake_A 194 TLDEVVAWVLAHI 206 (208)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6999998888655
No 298
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=96.36 E-value=0.01 Score=57.09 Aligned_cols=94 Identities=14% Similarity=0.018 Sum_probs=53.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh------------------hhhhhc-ccHHHHHHHHHcCCeEEEEec
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS------------------VLTEVQ-TEIERVYELASTLQLVVLDCD 210 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p------------------Fe~~I~-TslesI~~vi~sGKi~ILDID 210 (510)
+||+|+||||+.+.|.. .+..+.+.-...-|.. ++.... .-...+..+++.|..+|+|..
T Consensus 38 ~G~~GsGKSTla~~L~~~l~~~~~~~~~D~~r~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~vVid~~ 117 (253)
T 2p5t_B 38 GGQSGAGKTTIHRIKQKEFQGNIVIIDGDSFRSQHPHYLELQQEYGKDSVEYTKDFAGKMVESLVTKLSSLGYNLLIEGT 117 (253)
T ss_dssp ESCGGGTTHHHHHHHHHHTTTCCEEECGGGGGTTSTTHHHHHTTCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred ECCCCCCHHHHHHHHHHhcCCCcEEEecHHHHHhchhHHHHHHHcCchHHHHhhHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 99999999999999987 5432333222222221 000000 012344556778999999988
Q ss_pred cCCch-----hHhhhc-CCCceEEEEeCCCHHHHHHHHHhc
Q psy6613 211 TINHP-----SQLAKT-NLSPCIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 211 ~qg~~-----lq~lks-~l~PivIFIkPPS~e~L~~rLr~R 245 (510)
+.+.. .+.++. .....+||+.. +.+++.+|...|
T Consensus 118 ~~~~~~~~~~~~~l~~~g~~v~lv~l~~-~~e~~~~R~~~R 157 (253)
T 2p5t_B 118 LRTVDVPKKTAQLLKNKGYEVQLALIAT-KPELSYLSTLIR 157 (253)
T ss_dssp TTSSHHHHHHHHHHHHTTCEEEEEEECC-CHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCcEEEEEEeC-CHHHHHHHHHHH
Confidence 76511 112333 34444567766 677777776554
No 299
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=96.33 E-value=0.00042 Score=63.67 Aligned_cols=135 Identities=12% Similarity=0.048 Sum_probs=69.9
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchhh-------------------------h-hhhc-----ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSV-------------------------L-TEVQ-----TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pF-------------------------e-~~I~-----TslesI~~v 198 (510)
+|++|+||||+.+.|.+ .. ..++.+.+++.+.| . ..+. ...+.|...
T Consensus 6 ~G~~GsGKsTl~~~L~~~l~-~~g~~v~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~i~~~ 84 (214)
T 1gtv_A 6 EGVDGAGKRTLVEKLSGAFR-AAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGL 84 (214)
T ss_dssp EEEEEEEHHHHHHHHHHHHH-EEEEEEEEEESSEEEEEEEEEEHHHHEEEEEEEEEEEHHHHHHHHHHHHHEEHHHHHHE
T ss_pred EcCCCCCHHHHHHHHHHHHH-hcCCeEEEEeecCCCCcchhhHHHHHHcccccccCCCHhHHHHHHHHHHhhhHHHHHHH
Confidence 89999999999999887 32 12222222211110 0 0000 113445666
Q ss_pred HHcCCeEEEEeccCCch----h-----------Hhhhc------CC-Cc-eEEEEeCCCHHHHHHHHHhcCC-------C
Q psy6613 199 ASTLQLVVLDCDTINHP----S-----------QLAKT------NL-SP-CIVYLKISSPKVLQRLIKSRGK-------S 248 (510)
Q Consensus 199 i~sGKi~ILDID~qg~~----l-----------q~lks------~l-~P-ivIFIkPPS~e~L~~rLr~Rgt-------~ 248 (510)
+..|++||+|-.+.... . ..++. .+ .| .+||+..| .+++.+|+..|+. +
T Consensus 85 l~~g~~vi~D~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~l~~~-~~~~~~R~~~R~~~~~~~~~d 163 (214)
T 1gtv_A 85 CRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVS-AELAGERSRGRAQRDPGRARD 163 (214)
T ss_dssp EEEEEEEEEEEEEHHHHHHHHHHEEEEEEEHHHHHHHHHHEEEEECCBCEEEEEEEEE-HHHHHHHHHHHHHEBBEEEEE
T ss_pred hhCCCEEEECCCcccchhhhhcccCccccHHHHHHHHhcccccccCCCCCEEEEEeCC-HHHHHHHHHcccccccccccc
Confidence 67899999998763210 1 11221 11 23 45566554 5788888877643 1
Q ss_pred c---HHHHHHHH-HHHHHHHhcCCCCccEEEeCC--CHHHHHHHHH
Q psy6613 249 Q---TRHLNVQM-VAAEKLAQCPQEMFDVILDEN--QLEDACEHIA 288 (510)
Q Consensus 249 ~---~e~i~kRL-~aa~eLEq~~~~~FD~VIvND--dLd~A~~eL~ 288 (510)
. ..+..+++ .+-.++...++ ..+++++|+ ++++.++++.
T Consensus 164 ~~e~~~~~~~~~~~~~~~~~~~~~-~~~~~vId~~~~~~~v~~~i~ 208 (214)
T 1gtv_A 164 NYERDAELQQRTGAVYAELAAQGW-GGRWLVVGADVDPGRLAATLA 208 (214)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHEEE-EEEEEEEEEEEBHHHHHHHHC
T ss_pred cccccHHHHHHHHHHHHHHHHhCC-CCCEEEEeCCCCHHHHHHHhc
Confidence 1 14566666 44445554432 245444443 4555555443
No 300
>3fdi_A Uncharacterized protein; cytidylate kinase like protein, PSI, MCSG, PRK04182 class ME structural genomics, protein structure initiative; 2.20A {Eubacterium ventriosum}
Probab=96.33 E-value=0.031 Score=52.31 Aligned_cols=97 Identities=9% Similarity=0.123 Sum_probs=55.0
Q ss_pred HHHHHHHHH-cCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHH----HHH-Hh
Q psy6613 192 IERVYELAS-TLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAA----EKL-AQ 265 (510)
Q Consensus 192 lesI~~vi~-sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa----~eL-Eq 265 (510)
.+.|++++. ....||++--- | .-+++..-+.+.|||..| ++++.+|+..+..-+.++..++|..- ... ..
T Consensus 87 ~~~i~~la~~~~~~~Vi~Gr~-g--~~vl~~~~~~~~V~L~A~-~e~r~~R~~~~~~~~~~~~~~~i~~~d~~R~~~y~~ 162 (201)
T 3fdi_A 87 FNFIRKKANEEKESFVIVGRC-A--EEILSDNPNMISAFILGD-KDTKTKRVMEREGVDEKTALNMMKKMDKMRKVYHNF 162 (201)
T ss_dssp HHHHHHHHHTSCCCEEEESTT-H--HHHTTTCTTEEEEEEEEC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEECC-c--chhcCCCCCeEEEEEECC-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445566662 34468887542 3 334443335689999995 66666666544223344444444111 111 11
Q ss_pred ------cCCCCccEEEeCC--CHHHHHHHHHHHHH
Q psy6613 266 ------CPQEMFDVILDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 266 ------~~~~~FD~VIvND--dLd~A~~eL~~ile 292 (510)
.++..||++|.++ +++++++.+.++++
T Consensus 163 ~~~~~~~~~~~~dl~Idt~~l~~eevv~~I~~~i~ 197 (201)
T 3fdi_A 163 YCESKWGDSRTYDICIKIGKVDVDTATDMIIKYID 197 (201)
T ss_dssp HCSSCTTBGGGCSEEEEESSSCHHHHHHHHHHHHH
T ss_pred HhCCCCCCcccCCEEEECCCCCHHHHHHHHHHHHH
Confidence 1233489999876 57888888886654
No 301
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=96.32 E-value=0.028 Score=53.86 Aligned_cols=86 Identities=7% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCeEEEEeccCCchhHhhh-cCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHH-HH---HHHHHhcCCCCccEEEe
Q psy6613 202 LQLVVLDCDTINHPSQLAK-TNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQM-VA---AEKLAQCPQEMFDVILD 276 (510)
Q Consensus 202 GKi~ILDID~qg~~lq~lk-s~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL-~a---a~eLEq~~~~~FD~VIv 276 (510)
+..||+|+..-- +... ..+.-.+|||..|. ++..+|+..|...+.++...|+ .+ .++++ .-|+||.
T Consensus 112 ~~~vv~d~pLL~---E~~~~~~~~D~vi~V~ap~-e~r~~Rl~~Rdg~s~eea~~ri~~Q~~~eek~~-----~AD~VId 182 (210)
T 4i1u_A 112 GPYVIFVVPLLV---ESRNWKARCDRVLVVDCPV-DTQIARVMQRNGFTREQVEAIIARQATREARLA-----AADDVIV 182 (210)
T ss_dssp SSSEEEECTTCT---TCHHHHHHCSEEEEEECCH-HHHHHHHHHHHCCCHHHHHHHHHHSCCHHHHHH-----TCSEEEE
T ss_pred CCEEEEEEeccc---ccCCccccCCeEEEEECCH-HHHHHHHHhcCCCCHHHHHHHHHHcCChHHHHH-----hCCEEEE
Confidence 568999986521 1011 12345688888874 5555566666445566666666 22 12222 4489999
Q ss_pred CC--CHHHHHHHHHHHHHHHHH
Q psy6613 277 EN--QLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 277 ND--dLd~A~~eL~~ileai~~ 296 (510)
|+ ++++...++..+++.+..
T Consensus 183 N~~gsle~l~~qV~~l~~~~~~ 204 (210)
T 4i1u_A 183 NDAATPDALAVQVDALHQRYLA 204 (210)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 98 899999999988776654
No 302
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=96.29 E-value=0.0023 Score=67.35 Aligned_cols=58 Identities=7% Similarity=-0.084 Sum_probs=42.9
Q ss_pred EecCcCChHHHHHHHhc-CCCC--------ceeeecCCCchhhh-----------------hhhc------ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSK--------RAIMERSNSRSSVL-----------------TEVQ------TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~--------F~~sVshTTR~pFe-----------------~~I~------TslesI~~v 198 (510)
+||+|+|||||..+|.+ .+.. +...+++||++|-. +.+. --...|.++
T Consensus 8 ~GptgsGKttla~~La~~~~~~iis~Ds~QvYr~l~i~T~kp~~~E~~gv~hhlid~~~~~~~~s~~~F~~~a~~~i~~i 87 (409)
T 3eph_A 8 AGTTGVGKSQLSIQLAQKFNGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDI 87 (409)
T ss_dssp EECSSSSHHHHHHHHHHHHTEEEEECCTTTTBSSCTTTTTCCCGGGTTTCCEESCSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ECcchhhHHHHHHHHHHHCCCeEeecCccceecccccccCCCCHHHHcCchhhcCCccChHhHhhHHHHHHHHHHHHHHH
Confidence 89999999999999987 5532 33346889998811 1111 346788999
Q ss_pred HHcCCeEEEE
Q psy6613 199 ASTLQLVVLD 208 (510)
Q Consensus 199 i~sGKi~ILD 208 (510)
...|+++||-
T Consensus 88 ~~~g~~pilV 97 (409)
T 3eph_A 88 HRRGKIPIVV 97 (409)
T ss_dssp HTTTCEEEEE
T ss_pred HhcCCCEEEE
Confidence 9999999993
No 303
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=96.28 E-value=0.051 Score=49.83 Aligned_cols=17 Identities=6% Similarity=0.003 Sum_probs=16.1
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|+||||+.+.|..
T Consensus 27 ~G~~GsGKSTl~~~L~~ 43 (207)
T 2qt1_A 27 SGVTNSGKTTLAKNLQK 43 (207)
T ss_dssp EESTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999999887
No 304
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=96.27 E-value=0.026 Score=52.11 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=47.8
Q ss_pred cCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHH---HHhcCCC-cHHHHHHHH-HH----H-HHHHhcCCCC
Q psy6613 201 TLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRL---IKSRGKS-QTRHLNVQM-VA----A-EKLAQCPQEM 270 (510)
Q Consensus 201 sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~r---Lr~Rgt~-~~e~i~kRL-~a----a-~eLEq~~~~~ 270 (510)
.+..+|+|....+ -..+ ....++||+..|.-..++++ +..||.. +.+....++ .. . .+.+..+ ..
T Consensus 122 ~~~~~vldg~~~~--~~~~--~~~d~~i~l~~~~e~~~~R~~~~l~~rg~~~~~~~~~~~i~~R~~~~~~~~~~pl~-~~ 196 (227)
T 1cke_A 122 ELPGLIADGRDMG--TVVF--PDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRNRAVAPLV-PA 196 (227)
T ss_dssp CTTCEEEEESSCC--CCCC--TTCSEEEEEECCHHHHHHHHHHHHHHHTCCCCHHHHHHHHC-------------CC-CC
T ss_pred hCCCEEEECCCcc--ceEe--cCCCEEEEEeCCHHHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHhhhhhcccCcc-CC
Confidence 4678899986433 1111 22468899998754444443 2355642 334444445 21 1 1222222 12
Q ss_pred c-cEEEeCC--CHHHHHHHHHHHHHHHH
Q psy6613 271 F-DVILDEN--QLEDACEHIAEYLEAYW 295 (510)
Q Consensus 271 F-D~VIvND--dLd~A~~eL~~ileai~ 295 (510)
+ +++|.|+ ++++.++++.+++..+.
T Consensus 197 ~~~~~Id~~~~~~~ev~~~I~~~l~~~~ 224 (227)
T 1cke_A 197 ADALVLDSTTLSIEQVIEKALQYARQKL 224 (227)
T ss_dssp TTCEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 2 2777776 68999999987776543
No 305
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=96.24 E-value=0.013 Score=54.35 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=49.2
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh--------------hhhhhcc----cHHHHHHHHHc---CCeEEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS--------------VLTEVQT----EIERVYELAST---LQLVVLD 208 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p--------------Fe~~I~T----slesI~~vi~s---GKi~ILD 208 (510)
+|++|+||||+.+.|.+ .. ...+......|.. |...... -.+.|...+.+ ++.+|+|
T Consensus 6 ~G~~GsGKsT~a~~L~~~~g-~~~i~~d~~~r~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~~~~~~i~d 84 (214)
T 1e4v_A 6 LGAPVAGKGTQAQFIMEKYG-IPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLD 84 (214)
T ss_dssp EESTTSSHHHHHHHHHHHHC-CCEEEHHHHHHHHHHHTCTTTGGGHHHHHHTCCCCHHHHHHHHHHHHTSGGGGGCEEEE
T ss_pred ECCCCCCHHHHHHHHHHHhC-CeEEeHHHHHHHHHHcCChHHHHHHHHHHCCCcCCHHHHHHHHHHHHhccccCCCEEEe
Confidence 89999999999999987 32 2223333333441 1100001 12233444443 3568888
Q ss_pred eccCCchh--Hhhhc-CCCc-eEEEEeCCCHHHHHHHHHhc
Q psy6613 209 CDTINHPS--QLAKT-NLSP-CIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 209 ID~qg~~l--q~lks-~l~P-ivIFIkPPS~e~L~~rLr~R 245 (510)
--+.. .. ..+.. ...| ++|||..| .+++.+|+..|
T Consensus 85 g~~~~-~~~~~~l~~~~~~~d~vi~l~~~-~e~~~~R~~~R 123 (214)
T 1e4v_A 85 GFPRT-IPQADAMKEAGINVDYVLEFDVP-DELIVDRIVGR 123 (214)
T ss_dssp SCCCS-HHHHHHHHHTTCCCSEEEEEECC-HHHHHHHHHTE
T ss_pred CCCCC-HHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHCC
Confidence 65444 11 22333 3444 67777765 56667776644
No 306
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=96.24 E-value=0.0037 Score=60.38 Aligned_cols=147 Identities=7% Similarity=-0.006 Sum_probs=72.8
Q ss_pred CCCeE--EecCcCChHHHHHHHhc-CCCCceeeecCCCchh----hhhh----------hc-------------ccHHH-
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS----VLTE----------VQ-------------TEIER- 194 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p----Fe~~----------I~-------------Tsles- 194 (510)
.+.+| .|++|+||||+.+.|.+ .....++.+-.|||.| +-+. +. ..++.
T Consensus 20 ~~~~i~~~G~~g~GKst~~~~l~~~l~~~~g~~v~~~treP~~t~~g~~ir~~l~~~~~~~~~~e~llf~a~R~~~~~~~ 99 (223)
T 3ld9_A 20 GSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDSLSELLFFIAMRREHFVKI 99 (223)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHHHCGGGEEEEESSCSSHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHhhccCceeeEeeeCCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555 79999999999999887 2210223344445554 1110 10 22223
Q ss_pred HHHHHHcCCeEEEEeccCCch----------hHhhh---c---CCCc-eEEEEeCCCHHHHHHHHHhcCC-Cc-HHHHHH
Q psy6613 195 VYELASTLQLVVLDCDTINHP----------SQLAK---T---NLSP-CIVYLKISSPKVLQRLIKSRGK-SQ-TRHLNV 255 (510)
Q Consensus 195 I~~vi~sGKi~ILDID~qg~~----------lq~lk---s---~l~P-ivIFIkPPS~e~L~~rLr~Rgt-~~-~e~i~k 255 (510)
|...+++|++||+|=-+.++. .+.++ . .+.| .+||+..| .++..+|+ .++. +. ..+..+
T Consensus 100 I~paL~~g~~VI~DRy~~S~~Ayq~~~~g~~~~~~~~l~~~~~~~~PDl~I~Ldv~-~e~~~~Ri-~rdr~E~~~~e~~~ 177 (223)
T 3ld9_A 100 IKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLNDLVIDVYPDITFIIDVD-INESLSRS-CKNGYEFADMEFYY 177 (223)
T ss_dssp HHHHHHTTCEEEEESCHHHHHHHHTTTTCCCHHHHHHHHHHHCSSCCSEEEEEECC------------------CHHHHH
T ss_pred HHHHHhcCCeEEEccchhhHHHhccccCCccHHHHHHHHHHhhcCCCCeEEEEeCC-HHHHHHHh-ccCccccchHHHHH
Confidence 556778999999986432100 11111 1 1344 56666664 45566665 3332 11 134556
Q ss_pred HH-HHHHHHHhcCCCCccEEEe-CCCHHHHHHHHHHHHHHHHH
Q psy6613 256 QM-VAAEKLAQCPQEMFDVILD-ENQLEDACEHIAEYLEAYWR 296 (510)
Q Consensus 256 RL-~aa~eLEq~~~~~FD~VIv-NDdLd~A~~eL~~ileai~~ 296 (510)
|+ +.-.++...++. -..+|. +.++++. +++.++|+.++.
T Consensus 178 rv~~~y~~la~~~~~-~~~vIDa~~sieeV-~~I~~~l~~~lg 218 (223)
T 3ld9_A 178 RVRDGFYDIAKKNPH-RCHVITDKSETYDI-DDINFVHLEVIK 218 (223)
T ss_dssp HHHHHHHHHHHHCTT-TEEEEESSCSSSCC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-CEEEEcCCCCHHHH-HHHHHHHHHHHh
Confidence 66 444556555532 234554 3567777 777777766654
No 307
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=96.18 E-value=0.0019 Score=57.01 Aligned_cols=61 Identities=13% Similarity=0.140 Sum_probs=35.5
Q ss_pred ceEEEEeCCCHHHHHHHHHhcCCCc-----HHHHHHHHHHHHHHHhcCCCCccEEEeCC--CHHHHHHHHHHHH
Q psy6613 225 PCIVYLKISSPKVLQRLIKSRGKSQ-----TRHLNVQMVAAEKLAQCPQEMFDVILDEN--QLEDACEHIAEYL 291 (510)
Q Consensus 225 PivIFIkPPS~e~L~~rLr~Rgt~~-----~e~i~kRL~aa~eLEq~~~~~FD~VIvND--dLd~A~~eL~~il 291 (510)
.++|||..| .+++.+|+..|+.-. .+.+..++... ...|.. .|++| |+ ++++.++++.+++
T Consensus 94 ~~~i~l~~~-~e~~~~R~~~r~~r~~~~~~~~~i~~~~~~~---~~~~~~-~~~~i-~~~~~~~~~~~~i~~~l 161 (168)
T 2pt5_A 94 GTTVFIDIP-FEVFLERCKDSKERPLLKRPLDEIKNLFEER---RKIYSK-ADIKV-KGEKPPEEVVKEILLSL 161 (168)
T ss_dssp SEEEEEECC-HHHHHHHCBCTTCCBGGGSCGGGTHHHHHHH---HHHHTT-SSEEE-ECSSCHHHHHHHHHHHH
T ss_pred CEEEEEECC-HHHHHHHHhCCCCCCCCcchHHHHHHHHHHH---HHHHHh-CCEEE-CCCCCHHHHHHHHHHHH
Confidence 478888875 677777876643111 22233333211 122334 79999 76 6888888887554
No 308
>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*
Probab=96.13 E-value=0.0018 Score=65.13 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=37.4
Q ss_pred CCCCCCccccCC------CCccCCCChhhhhh----hcccccCCCCCcccc-----CCCcceEEeCCCCCCchhHHHHHH
Q psy6613 372 DDNESIGNSRAG------KNTLTTPTTKEKKK----IFFKKQETTTPYDVV-----PSMRPVVLVGPSLKGYEVTDMMQK 436 (510)
Q Consensus 372 ~~~~~~~~~~~~------~~~~~~~~~~~~~~----~~~~~~~~~~~y~~~-----p~~rp~~~~gp~~~~~~~~~~m~~ 436 (510)
|++||.|+...+ .+.++++...+++. ...+..+++.+|+.| +..|||||+||+ ||.-+..||++
T Consensus 42 d~~wWqA~~v~~~~~~~~~GlIPS~~~~e~~~~~~~~~~~~~~~~~~YE~V~~~~~~~~RpvVl~Gp~-K~tl~~~Ll~~ 120 (292)
T 3tvt_A 42 DDEWWQARRVLGDNEDEQIGIVPSKRRWERKMRARDRSVKSEENVLSYEAVQRLSINYTRPVIILGPL-KDRINDDLISE 120 (292)
T ss_dssp SSSEEEECCCCC--------EEECHHHHHHHHHC----------CCCEEEEEEEECSSCCCEEEESTT-HHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCccceeEEeChHHHHHHHHHhhccccccccccchheEEeccCCCCCeEEEeCCC-HHHHHHHHHHh
Confidence 678998875322 23344443333221 123567789999999 889999999998 77766666554
No 309
>1uj2_A Uridine-cytidine kinase 2; alpha/beta mononucleotide-binding HOLD, transferase; HET: C5P ADP; 1.80A {Homo sapiens} SCOP: c.37.1.6 PDB: 1uei_A* 1uej_A* 1udw_A 1ufq_A* 1xrj_A*
Probab=96.09 E-value=0.03 Score=53.53 Aligned_cols=17 Identities=6% Similarity=-0.050 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
.|++|+||||+.+.|.+
T Consensus 28 ~G~~GSGKST~a~~L~~ 44 (252)
T 1uj2_A 28 SGGTASGKSSVCAKIVQ 44 (252)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999998876
No 310
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=95.94 E-value=0.03 Score=52.04 Aligned_cols=92 Identities=15% Similarity=0.083 Sum_probs=49.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh------hhhhhc------------ccHHHHHHHHH----cCCeEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS------VLTEVQ------------TEIERVYELAS----TLQLVVL 207 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p------Fe~~I~------------TslesI~~vi~----sGKi~IL 207 (510)
+|++|+||||+.+.|.+ ..-.+ +......|.. .-..+. .....+.+.+. .|..+|+
T Consensus 10 ~G~~GsGKsT~a~~La~~l~~~~-i~~d~~~~~~~~~~~~~g~~i~~~~~~g~~~~~~~~~~~l~~~l~~~~~~~~~~i~ 88 (220)
T 1aky_A 10 IGPPGAGKGTQAPNLQERFHAAH-LATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNGFIL 88 (220)
T ss_dssp ECCTTSSHHHHHHHHHHHHCCEE-EEHHHHHHHHHHTTCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCGGGGSCEEE
T ss_pred ECCCCCCHHHHHHHHHHHcCceE-EehhHHHHHHHHcCChHHHHHHHHHHCCCcCCHHHHHHHHHHHHHhccccCCCeEE
Confidence 89999999999999877 32111 1111111211 000000 11233444444 5778999
Q ss_pred EeccCCchh--H----hhhc-CCCc-eEEEEeCCCHHHHHHHHHhc
Q psy6613 208 DCDTINHPS--Q----LAKT-NLSP-CIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 208 DID~qg~~l--q----~lks-~l~P-ivIFIkPPS~e~L~~rLr~R 245 (510)
|--+.+ .. + .+.. ...| ++||+..| .+++.+|+..|
T Consensus 89 dg~~~~-~~~~~~l~~~l~~~~~~~d~vi~L~~~-~e~~~~R~~~r 132 (220)
T 1aky_A 89 DGFPRT-IPQAEKLDQMLKEQGTPLEKAIELKVD-DELLVARITGR 132 (220)
T ss_dssp ESCCCS-HHHHHHHHHHHHHHTCCCCEEEEEECC-HHHHHHHHHTE
T ss_pred eCCCCC-HHHHHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHhCC
Confidence 954433 11 1 1222 3456 67888875 67777787665
No 311
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=95.88 E-value=0.11 Score=48.87 Aligned_cols=17 Identities=12% Similarity=-0.009 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|+||||+.+.|.+
T Consensus 22 ~G~~GsGKsT~a~~La~ 38 (233)
T 1ak2_A 22 LGPPGAGKGTQAPKLAK 38 (233)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999999886
No 312
>3nwj_A ATSK2; P loop, shikimate, nucleoside monophosphate kinase, shikimat ATP binding, chloroplast, transferase; 2.35A {Arabidopsis thaliana}
Probab=95.88 E-value=0.031 Score=54.62 Aligned_cols=138 Identities=10% Similarity=0.014 Sum_probs=68.6
Q ss_pred EecCcCChHHHHHHHhc-CCCCceee---ecCCC-chh----hhh---hhc--ccHHHHHHHHHcCCeEEEEeccCCch-
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIM---ERSNS-RSS----VLT---EVQ--TEIERVYELASTLQLVVLDCDTINHP- 215 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~s---VshTT-R~p----Fe~---~I~--TslesI~~vi~sGKi~ILDID~qg~~- 215 (510)
+|++|+||||+.+.|.. ..-.|.-. +...+ ... |.. .+. ...+.+.++......+|+..- .|.+
T Consensus 54 ~G~~GsGKSTl~~~La~~lg~~~~d~d~~~~~~~~g~~i~~i~~~~ge~~fr~~e~~~l~~l~~~~~~~Via~G-gG~v~ 132 (250)
T 3nwj_A 54 VGMMGSGKTTVGKIMARSLGYTFFDCDTLIEQAMKGTSVAEIFEHFGESVFREKETEALKKLSLMYHQVVVSTG-GGAVI 132 (250)
T ss_dssp ECSTTSCHHHHHHHHHHHHTCEEEEHHHHHHHHSTTSCHHHHHHHHCHHHHHHHHHHHHHHHHHHCSSEEEECC-GGGGG
T ss_pred ECCCCCCHHHHHHHHHHhcCCcEEeCcHHHHHHhcCccHHHHHHHhCcHHHHHHHHHHHHHHHhhcCCcEEecC-CCeec
Confidence 99999999999998875 21111110 00001 001 211 111 223345566655233444322 1211
Q ss_pred ----hHhhhcCCCceEEEEeCCCHHHHHHHHHh-----cCCCcH-------HHHHHHH----HHHHHHHhcCCCCccEEE
Q psy6613 216 ----SQLAKTNLSPCIVYLKISSPKVLQRLIKS-----RGKSQT-------RHLNVQM----VAAEKLAQCPQEMFDVIL 275 (510)
Q Consensus 216 ----lq~lks~l~PivIFIkPPS~e~L~~rLr~-----Rgt~~~-------e~i~kRL----~aa~eLEq~~~~~FD~VI 275 (510)
...++ ..++||+..| .+++.+|+.. |+.... +....++ .....+ |. .-|++|
T Consensus 133 ~~~~~~~l~---~~~vV~L~a~-~e~l~~Rl~~~~~~~Rpl~~~~~~~d~~~~~~~~l~~l~~eR~~l---Y~-~ad~vi 204 (250)
T 3nwj_A 133 RPINWKYMH---KGISIWLDVP-LEALAHRIAAVGTGSRPLLHDDESGDTYTAALNRLSTIWDARGEA---YT-KASARV 204 (250)
T ss_dssp SHHHHHHHT---TSEEEEEECC-HHHHHHHHHC----------------CHHHHHHHHHHHHHHHHHH---HT-TSSEEE
T ss_pred CHHHHHHHh---CCcEEEEECC-HHHHHHHHhhcCCCCCCcccCCCcccchhhHHHHHHHHHHHHHHH---Hh-hCCEEE
Confidence 22222 3678999885 6778888764 222111 0112223 222222 32 278998
Q ss_pred --------------eCCCHHHHHHHHHHHHHHHHHh
Q psy6613 276 --------------DENQLEDACEHIAEYLEAYWRA 297 (510)
Q Consensus 276 --------------vNDdLd~A~~eL~~ileai~~a 297 (510)
.+-+.++.++++.+.++.+...
T Consensus 205 ~~~~~~~~~~~iDTs~~s~eev~~~I~~~i~~~~~~ 240 (250)
T 3nwj_A 205 SLENITLKLGYRSVSDLTPAEIAIEAFEQVQSYLEK 240 (250)
T ss_dssp EHHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHT
T ss_pred EecccccccccccCCCCCHHHHHHHHHHHHHHHhhc
Confidence 3457888999988888776644
No 313
>3tmk_A Thymidylate kinase; phosphotransferase; HET: T5A; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 2tmk_A* 1tmk_A*
Probab=95.73 E-value=0.046 Score=52.30 Aligned_cols=148 Identities=11% Similarity=0.030 Sum_probs=79.1
Q ss_pred CCeE--EecCcCChHHHHHHHhc-CCCC-ceeeec-CCCchh-----h-----------------hhhhcccHHHHHHHH
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-NPSK-RAIMER-SNSRSS-----V-----------------LTEVQTEIERVYELA 199 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~P~~-F~~sVs-hTTR~p-----F-----------------e~~I~TslesI~~vi 199 (510)
++.| .|++|+||||+.+.|.+ .... ..+.-| ..|.-- + .+.-.-..+.|...+
T Consensus 5 g~~i~~eG~~g~GKst~~~~l~~~l~~~~~~~~ep~~~t~~g~~ir~~l~~~~~~~~~~~~~llf~a~R~~~~~~I~paL 84 (216)
T 3tmk_A 5 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSFQLSDQAIHLLFSANRWEIVDKIKKDL 84 (216)
T ss_dssp CCEEEEEECSSSSHHHHHHHHHHHHCSSEEEEESSCTTSHHHHHHHHHHHCTTSCCCHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhcccceEEEecCCCChHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4554 89999999999999988 3321 111112 111100 0 000002345677788
Q ss_pred HcCCeEEEEeccCCc------------hhHhhhc----CCCc-eEEEE-eCCCHHHHHHHHHhcC--CCcHHHHHHHH-H
Q psy6613 200 STLQLVVLDCDTINH------------PSQLAKT----NLSP-CIVYL-KISSPKVLQRLIKSRG--KSQTRHLNVQM-V 258 (510)
Q Consensus 200 ~sGKi~ILDID~qg~------------~lq~lks----~l~P-ivIFI-kPPS~e~L~~rLr~Rg--t~~~e~i~kRL-~ 258 (510)
++|++||+|=-..++ .+..++. .+.| ++||+ ..| .++..+|+..++ -+. .+-.+|+ +
T Consensus 85 ~~g~~VI~DRy~~S~~ayq~~~~l~~~~~~~l~~~~~~~~~PDlti~L~dv~-pe~~~~R~~~~~dr~E~-~~f~~rvr~ 162 (216)
T 3tmk_A 85 LEGKNIVMDRYVYSGVAYSAAKGTNGMDLDWCLQPDVGLLKPDLTLFLSTQD-VDNNAEKSGFGDERYET-VKFQEKVKQ 162 (216)
T ss_dssp HTTCEEEEESCHHHHHHHHHTTCCTTCCHHHHHGGGTTSBCCSEEEEEECSC-CSCGGGCCSSSCCTTCC-HHHHHHHHH
T ss_pred HcCCEEEEeccHhHHHHHHHhcCCCHHHHHHHHHHhhCCCCCCEEEEEeCCC-HHHHHHHhccCcccccH-HHHHHHHHH
Confidence 999999998532110 1222332 2345 56666 433 334445543222 122 4555566 3
Q ss_pred HHHHHHhc----CCCCccEEEe--CCCHHHHHHHHHHHHHHHHHh
Q psy6613 259 AAEKLAQC----PQEMFDVILD--ENQLEDACEHIAEYLEAYWRA 297 (510)
Q Consensus 259 aa~eLEq~----~~~~FD~VIv--NDdLd~A~~eL~~ileai~~a 297 (510)
.=.++... ++.. -.||. +.++++..+++.++|+.++..
T Consensus 163 ~Y~~la~~~~~~~~~~-~~vID~a~~s~eeV~~~I~~~i~~~l~~ 206 (216)
T 3tmk_A 163 TFMKLLDKEIRKGDES-ITIVDVTNKGIQEVEALIWQIVEPVLST 206 (216)
T ss_dssp HHHHHHHHHHHTTCCS-EEEEECTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhccccCCCC-EEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 33444432 2222 23344 478999999999888877653
No 314
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=95.63 E-value=0.03 Score=52.17 Aligned_cols=94 Identities=13% Similarity=0.077 Sum_probs=48.3
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeee--------cCCCc--hh----hhhh--hc--ccHHHHHHHHHc---CCeEEEE
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIME--------RSNSR--SS----VLTE--VQ--TEIERVYELAST---LQLVVLD 208 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sV--------shTTR--~p----Fe~~--I~--TslesI~~vi~s---GKi~ILD 208 (510)
+|++|+||||+.+.|.+ .. ...+.. +..|. .. |... +. ...+.|...+.. |+.+|+|
T Consensus 11 ~G~~GsGKsT~a~~La~~l~-~~~i~~d~li~~~~~~~t~~g~~i~~~~~~g~~~~~~~~~~~i~~~l~~~~~~~~~i~d 89 (217)
T 3be4_A 11 IGAPGSGKGTQCEFIKKEYG-LAHLSTGDMLREAIKNGTKIGLEAKSIIESGNFVGDEIVLGLVKEKFDLGVCVNGFVLD 89 (217)
T ss_dssp EECTTSSHHHHHHHHHHHHC-CEEEEHHHHHHHHHHTC--CCHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTTTTCEEEE
T ss_pred ECCCCCCHHHHHHHHHHHhC-ceEEehhHHHHHHHHcCCHHHHHHHHHHHCCCcCCHHHHHHHHHHHHhccccCCCEEEe
Confidence 89999999999998876 32 111111 10000 00 1110 00 112233343433 8899999
Q ss_pred eccCCc-hhH----hhhc-CCCc-eEEEEeCCCHHHHHHHHHhcC
Q psy6613 209 CDTINH-PSQ----LAKT-NLSP-CIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 209 ID~qg~-~lq----~lks-~l~P-ivIFIkPPS~e~L~~rLr~Rg 246 (510)
--+.+. ..+ .+.. ...| ++||+..| .+++.+|+..|+
T Consensus 90 g~~~~~~~~~~l~~~l~~~~~~~d~vi~L~~~-~e~~~~Rl~~R~ 133 (217)
T 3be4_A 90 GFPRTIPQAEGLAKILSEIGDSLTSVIYFEID-DSEIIERISGRC 133 (217)
T ss_dssp SCCCSHHHHHHHHHHHHHHTCCCCEEEEEECC-HHHHHHHHHTEE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCEEEEEECC-HHHHHHHHHcCC
Confidence 544330 011 1222 3455 67777775 677888887764
No 315
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=95.52 E-value=0.0089 Score=53.51 Aligned_cols=131 Identities=9% Similarity=0.015 Sum_probs=64.7
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCC-ch-----h---hhh---hhc--ccHHHHHHHHHcCCeEEEEeccCCch
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNS-RS-----S---VLT---EVQ--TEIERVYELASTLQLVVLDCDTINHP 215 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTT-R~-----p---Fe~---~I~--TslesI~~vi~sGKi~ILDID~qg~~ 215 (510)
+||+|+||||+.+.|.+ .. +.+.-...- +. . |.. ... .....+..+. ....||++..... +
T Consensus 10 ~G~~GsGKsTla~~La~~l~--~~~~d~d~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~l~-~~~~~vi~~g~~~-~ 85 (175)
T 1via_A 10 IGFMGSGKSTLARALAKDLD--LVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQKMADFFS-SCEKACIATGGGF-V 85 (175)
T ss_dssp ECCTTSCHHHHHHHHHHHHT--CEEEEHHHHHHHHHTSCHHHHHHHHCHHHHHHHHHHHHHHHT-TCCSEEEECCTTG-G
T ss_pred EcCCCCCHHHHHHHHHHHcC--CCEEcccHHHHHHcCCCHHHHHHHcCHHHHHHHHHHHHHHHH-ccCCEEEECCCCE-e
Confidence 99999999999998876 32 111111000 00 0 110 000 1122233333 4456777753211 1
Q ss_pred hH-hhhcCCCceEEEEeCCCHHHHHHHHHhcC-----CCc-HHHHHHHHHHHHHHHhcCCCCccEEEeCC--CHHHHHHH
Q psy6613 216 SQ-LAKTNLSPCIVYLKISSPKVLQRLIKSRG-----KSQ-TRHLNVQMVAAEKLAQCPQEMFDVILDEN--QLEDACEH 286 (510)
Q Consensus 216 lq-~lks~l~PivIFIkPPS~e~L~~rLr~Rg-----t~~-~e~i~kRL~aa~eLEq~~~~~FD~VIvND--dLd~A~~e 286 (510)
.. .++. ..++||+.. +.+++.+|+..|. ... .+.+...+.....+ |....|++|.++ ++++++++
T Consensus 86 ~~~~l~~--~~~~i~l~~-~~e~~~~R~~~r~~~~r~~~~~~~~i~~~~~~r~~~---y~~~~~~~Idt~~~~~eev~~~ 159 (175)
T 1via_A 86 NVSNLEK--AGFCIYLKA-DFEYLKKRLDKDEISKRPLFYDEIKAKKLYNERLSK---YEQKANFILNIENKNIDELLSE 159 (175)
T ss_dssp GSTTGGG--GCEEEEEEC-CHHHHTTCCCGGGTTTSCTTCCHHHHHHHHHHHHHH---HHHHCSEEEECTTCCHHHHHHH
T ss_pred hhhHHhc--CCEEEEEeC-CHHHHHHHHhcccCCCCCCcccHHHHHHHHHHHHHH---HHhcCCEEEECCCCCHHHHHHH
Confidence 11 0221 247888886 5788888876552 111 12222222222222 223468999776 68888888
Q ss_pred HHHHH
Q psy6613 287 IAEYL 291 (510)
Q Consensus 287 L~~il 291 (510)
+.+++
T Consensus 160 I~~~l 164 (175)
T 1via_A 160 IKKVI 164 (175)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87444
No 316
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=95.36 E-value=0.018 Score=53.39 Aligned_cols=133 Identities=14% Similarity=0.139 Sum_probs=65.7
Q ss_pred EecCcCChHHHHHHHhc-CC-C-C--ceeeecCCCchh------hh-hh----hcccHHHHHHHHHcCCeEEEEeccCCc
Q psy6613 151 ITRVTADISLAKRSLMS-NP-S-K--RAIMERSNSRSS------VL-TE----VQTEIERVYELASTLQLVVLDCDTINH 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P-~-~--F~~sVshTTR~p------Fe-~~----I~TslesI~~vi~sGKi~ILDID~qg~ 214 (510)
+|++|+||||+.+.|.. .+ . . +.+.-...-|.. |. +. +..-.+.+...++.|..||+|.- ...
T Consensus 31 ~G~~GsGKsT~~~~l~~~l~~~~g~~~~~~~~d~~r~~l~~~~~~~~~~r~~~~~~~~~~~~~~l~~g~~VI~d~~-~~~ 109 (211)
T 1m7g_A 31 TGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFI-SPY 109 (211)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEECC-CCC
T ss_pred ECCCCCCHHHHHHHHHHHhccccCCcEEEECChHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEecC-Ccc
Confidence 99999999999998876 22 1 1 111100011111 10 11 00112234556789999999932 110
Q ss_pred --hhHhhhc--C--------CCc-eEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHH-----HHHHhcCC--CCccEE
Q psy6613 215 --PSQLAKT--N--------LSP-CIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAA-----EKLAQCPQ--EMFDVI 274 (510)
Q Consensus 215 --~lq~lks--~--------l~P-ivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa-----~eLEq~~~--~~FD~V 274 (510)
-.+.++. . ..| ++||+.. +.+++.+|+ .|+ ...+.... ..+...|. ...|++
T Consensus 110 ~~~~~~l~~l~~~~~~~~~~~~p~~vi~Ld~-~~e~~~~R~-~r~------~~~~~r~~~~~~~~~~~~~y~~~~~~~~~ 181 (211)
T 1m7g_A 110 RKDRDTARQLHEVATPGEETGLPFVEVYVDV-PVEVAEQRD-PKG------LYKKAREGVIKEFTGISAPYEAPANPEVH 181 (211)
T ss_dssp HHHHHHHHHHHHCCCTTCSCCCCEEEEEEEC-CHHHHHTSC-TTC------HHHHHHHTSSSSCBTTTBCCCCCSSCSEE
T ss_pred HHHHHHHHHHhhhcccccccCCCeEEEEEeC-CHHHHHHhh-hHH------HHHHHHhcchhhhhhhhhhccCCCCCeEE
Confidence 0222222 1 123 5677775 567777664 111 11111000 01222232 245788
Q ss_pred EeCC--CHHHHHHHHHHHHH
Q psy6613 275 LDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 275 IvND--dLd~A~~eL~~ile 292 (510)
|.++ ++++.++++.++|.
T Consensus 182 IDt~~~s~eev~~~I~~~l~ 201 (211)
T 1m7g_A 182 VKNYELPVQDAVKQIIDYLD 201 (211)
T ss_dssp EECSSSCHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHH
Confidence 8765 58888888886654
No 317
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=95.29 E-value=0.087 Score=49.18 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=43.2
Q ss_pred CCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCCccEEEeCC-CH
Q psy6613 202 LQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCPQEMFDVILDEN-QL 280 (510)
Q Consensus 202 GKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~~~~FD~VIvND-dL 280 (510)
+..||+|+..-- -.-+. .+.-.+|||..|. ++..+|+ +..++ ..+.......-|+||.|+ ++
T Consensus 111 ~~~vv~d~pll~--e~~~~-~~~d~vi~v~a~~-e~r~~Rl----------i~~q~---~~~~~~~~~~AD~vI~n~~~~ 173 (192)
T 2grj_A 111 SGLIVIEAALLK--RMGLD-QLCDHVITVVASR-ETILKRN----------READR---RLKFQEDIVPQGIVVANNSTL 173 (192)
T ss_dssp CEEEEEECTTTT--TTTGG-GGCSEEEEEECCH-HHHHHHC----------SSHHH---HHTTCTTCCCCSEEEECSSCH
T ss_pred CCEEEEEEecee--ecChH-HhCCEEEEEECCH-HHHHHHH----------HHhcC---CchhhhHHhcCCEEEECCCCH
Confidence 678899875321 00111 2345789999874 3333333 11122 111111235679999886 58
Q ss_pred HHHHHHHHHHHHHH
Q psy6613 281 EDACEHIAEYLEAY 294 (510)
Q Consensus 281 d~A~~eL~~ileai 294 (510)
++...++.++++.+
T Consensus 174 ~~l~~~v~~~~~~l 187 (192)
T 2grj_A 174 EDLEKKVEEVMKLV 187 (192)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777665
No 318
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=95.29 E-value=0.054 Score=48.84 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=66.6
Q ss_pred EecCcCChHHHHHHHhc-C-CCCceee-e-cCCCchh------hh-hhhcccHHH---H-HHHHHcCCeEEEEeccCCc-
Q psy6613 151 ITRVTADISLAKRSLMS-N-PSKRAIM-E-RSNSRSS------VL-TEVQTEIER---V-YELASTLQLVVLDCDTINH- 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~-P~~F~~s-V-shTTR~p------Fe-~~I~Tsles---I-~~vi~sGKi~ILDID~qg~- 214 (510)
+|++|+||||+.+.|.. . +..+... + ...-|.. |. .+....+.. + ..+...|.++|+|...-..
T Consensus 19 ~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~g~~vi~d~~~~~~~ 98 (186)
T 2yvu_A 19 TGLPGSGKTTIATRLADLLQKEGYRVEVLDGDWARTTVSEGAGFTREERLRHLKRIAWIARLLARNGVIVICSFVSPYKQ 98 (186)
T ss_dssp ECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCCHH
T ss_pred EcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHHHHHHHHhhccCCChhhHHHHHHHHHHHHHHHHhCCCEEEEeCccccHH
Confidence 99999999999998876 2 2122111 1 1111111 10 000011111 1 2235789999998743210
Q ss_pred hhHhhh----c-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHHhcCC--CCccEEEeCC--CHHHHH
Q psy6613 215 PSQLAK----T-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLN-VQMVAAEKLAQCPQ--EMFDVILDEN--QLEDAC 284 (510)
Q Consensus 215 ~lq~lk----s-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~-kRL~aa~eLEq~~~--~~FD~VIvND--dLd~A~ 284 (510)
....++ . ...-++||+.. +.+++.+|+..+. .+... ..+..-.++...|. ...|++|.++ +.++.+
T Consensus 99 ~r~~~~~~~~~~~~~~~~v~L~~-~~e~~~~R~~~~~---~~~~~~~~~~~~~~~~~~y~~~~~~~~~Id~~~~~~~ev~ 174 (186)
T 2yvu_A 99 ARNMVRRIVEEEGIPFLEIYVKA-SLEEVIRRDPKGL---YKKALKGELENFTGITDPYEPPENPQLVLDTESNTIEHNV 174 (186)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEC-CHHHHHHHCHHHH---HHHHHTTCCSSCHHHHSCCCCCSSCSEEEETTTSCHHHHH
T ss_pred HHHHHHHHhhccCCCeEEEEEeC-CHHHHHHhhhhhh---hhHHhhcchhhhhhhhhcccCCCCCcEEEECCCCCHHHHH
Confidence 011111 1 12235677776 4777777753210 00000 00100111222332 3468888775 688888
Q ss_pred HHHHHHHHH
Q psy6613 285 EHIAEYLEA 293 (510)
Q Consensus 285 ~eL~~ilea 293 (510)
+++.++|..
T Consensus 175 ~~I~~~l~~ 183 (186)
T 2yvu_A 175 SYLYSLVKA 183 (186)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888877654
No 319
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=95.24 E-value=0.0051 Score=66.65 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=69.9
Q ss_pred EecCcCChHHHHHHHhc-CCC-Cceeee-c-CCCchh------hh-hh----hcccHHHHHHHHHcCCeEEEEeccCC-c
Q psy6613 151 ITRVTADISLAKRSLMS-NPS-KRAIME-R-SNSRSS------VL-TE----VQTEIERVYELASTLQLVVLDCDTIN-H 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~-~F~~sV-s-hTTR~p------Fe-~~----I~TslesI~~vi~sGKi~ILDID~qg-~ 214 (510)
+|++|+||||+.+.|.+ ... .+.+.+ . ..-|.. |. .+ +..-...+..+++.|..||+|...-- .
T Consensus 378 ~G~~GsGKSTia~~La~~L~~~G~~~~~ld~D~ir~~l~~~~~f~~~er~~~l~~i~~~~~~~l~~G~~VI~d~~~~~~~ 457 (546)
T 2gks_A 378 TGLPCAGKSTIAEILATMLQARGRKVTLLDGDVVRTHLSRGLGFSKEDRITNILRVGFVASEIVKHNGVVICALVSPYRS 457 (546)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHTTCCEEEECHHHHHHHTCTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCCCHH
T ss_pred cCCCCCCHHHHHHHHHHHhhhcCCeEEEECchHhhhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCCHH
Confidence 89999999999998876 221 111111 1 011111 10 00 01112345567889999999953211 0
Q ss_pred hhHhhhcCC---CceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcC--CCCccEEEeCC--CHHHHHHHH
Q psy6613 215 PSQLAKTNL---SPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCP--QEMFDVILDEN--QLEDACEHI 287 (510)
Q Consensus 215 ~lq~lks~l---~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~--~~~FD~VIvND--dLd~A~~eL 287 (510)
..+..+..+ ..++|||.. +.+++.+|++ |+.- .+.....+..-..+...| ....|++|.|+ +++++.+++
T Consensus 458 ~r~~~~~~l~~~d~~vV~L~~-~~e~~~~Rl~-r~~~-~~~~~~~i~~~~~vr~~~e~~~~adivIDts~~s~eev~~~I 534 (546)
T 2gks_A 458 ARNQVRNMMEEGKFIEVFVDA-PVEVCEERDV-KGLY-KKAKEGLIKGFTGVDDPYEPPVAPEVRVDTTKLTPEESALKI 534 (546)
T ss_dssp HHHHHHTTSCTTCEEEEEEEC-CGGGHHHHCC-SSHH-HHC------CCBTTTBCCCCCSSCSEEEETTTSCHHHHHHHH
T ss_pred HHHHHHHHhhcCCEEEEEEeC-CHHHHHHHhh-cccc-ccccHHHHHHHHhhhhccccccCCcEEEECCCCCHHHHHHHH
Confidence 011122212 237889986 6778888865 3210 000000110000011112 13468999885 699999999
Q ss_pred HHHHH
Q psy6613 288 AEYLE 292 (510)
Q Consensus 288 ~~ile 292 (510)
.++|+
T Consensus 535 ~~~L~ 539 (546)
T 2gks_A 535 LEFLK 539 (546)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 86664
No 320
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=95.16 E-value=0.073 Score=47.04 Aligned_cols=133 Identities=12% Similarity=0.025 Sum_probs=63.0
Q ss_pred EecCcCChHHHHHHHhc-CCCCceee-e-----cCCCchh-hhh---hhc--ccHHHHHHHHHcCCeEEEEeccCCchhH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIM-E-----RSNSRSS-VLT---EVQ--TEIERVYELASTLQLVVLDCDTINHPSQ 217 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~s-V-----shTTR~p-Fe~---~I~--TslesI~~vi~sGKi~ILDID~qg~~lq 217 (510)
.|++|+||||+.+.|-+ ..-.|.-. . ...+-.. |.. .+. ...+.+..++..+..+|+... .|.+..
T Consensus 13 ~G~~GsGKSTva~~La~~lg~~~id~D~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~Vi~~g-~g~~~~ 91 (168)
T 1zuh_A 13 IGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELGEDNFRMFEKNLIDELKTLKTPHVISTG-GGIVMH 91 (168)
T ss_dssp ESCTTSSHHHHHHHHHHHHTCCEEEHHHHHHHHHTSCHHHHHHHTCHHHHHHHHHHHHHHHHTCSSCCEEECC-GGGGGC
T ss_pred ECCCCCCHHHHHHHHHHHhCCCEEEChHHHHHHhCCCHHHHHHHhCHHHHHHHHHHHHHHHHhcCCCEEEECC-CCEech
Confidence 89999999999998876 22111100 0 0000000 110 000 122335555555544155432 121111
Q ss_pred hhhc-CCCceEEEEeCCCHHHHHHHHHhc-----CCCc-HHHHHHHHHHHHHHHhcCCCCccEEEeCC-CHHHHHHHHHH
Q psy6613 218 LAKT-NLSPCIVYLKISSPKVLQRLIKSR-----GKSQ-TRHLNVQMVAAEKLAQCPQEMFDVILDEN-QLEDACEHIAE 289 (510)
Q Consensus 218 ~lks-~l~PivIFIkPPS~e~L~~rLr~R-----gt~~-~e~i~kRL~aa~eLEq~~~~~FD~VIvND-dLd~A~~eL~~ 289 (510)
.. .-.-.+|||..| .+++.+|+..| +... .+.+...+...... |....|++|.|+ +++++++++.+
T Consensus 92 --~~l~~~~~vi~l~~~-~e~~~~Rl~~r~~~~r~~~~~~~~~~~~~~~r~~~---~~~~a~~~Id~~~~~e~~~~~I~~ 165 (168)
T 1zuh_A 92 --ENLKGLGTTFYLKMD-FETLIKRLNQKEREKRPLLNNLTQAKELFEKRQAL---YEKNASFIIDARGGLNNSLKQVLQ 165 (168)
T ss_dssp --GGGTTSEEEEEEECC-HHHHHHHHCC--------CCTTHHHHHHHHHHHHH---HHHTCSEEEEGGGCHHHHHHHHHH
T ss_pred --hHHhcCCEEEEEECC-HHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHH---HHHHCCEEEECCCCHHHHHHHHHH
Confidence 11 112367888875 67777777655 2211 23333333222222 223469999876 58888777764
Q ss_pred H
Q psy6613 290 Y 290 (510)
Q Consensus 290 i 290 (510)
+
T Consensus 166 ~ 166 (168)
T 1zuh_A 166 F 166 (168)
T ss_dssp C
T ss_pred H
Confidence 3
No 321
>3hdt_A Putative kinase; structura genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.79A {Clostridium symbiosum atcc 14940}
Probab=95.12 E-value=0.18 Score=48.31 Aligned_cols=95 Identities=11% Similarity=0.122 Sum_probs=54.5
Q ss_pred HHHHHHHHcCCeEEEEeccCCchhHhh---hcCCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHH----HHHHh
Q psy6613 193 ERVYELASTLQLVVLDCDTINHPSQLA---KTNLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAA----EKLAQ 265 (510)
Q Consensus 193 esI~~vi~sGKi~ILDID~qg~~lq~l---ks~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa----~eLEq 265 (510)
+.|++++++| .||++--- | --++ +..-+.+.|||..| ++++.+|+..+..-+.++..++|..- .....
T Consensus 107 ~~i~~la~~~-~~Vi~Grg-g--g~vl~~~~~~~~~~~VfL~A~-~e~r~~Ri~~~~~~~~~~a~~~I~~~d~~R~~~Y~ 181 (223)
T 3hdt_A 107 EVMRELAESE-PCIFVGRA-A--GYVLDQDEDIERLIRIFVYTD-KVKKVQRVMEVDCIDEERAKRRIKKIEKERKEYYK 181 (223)
T ss_dssp HHHHHHHHHS-CEEEESTT-H--HHHHHHCTTCCEEEEEEEECC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC-CEEEEeCC-c--chhcccccCCCCeEEEEEECC-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4566777666 57776332 2 2344 32324688999995 67777676543223334444444111 11111
Q ss_pred c-------CCCCccEEEeCC--CHHHHHHHHHHHHH
Q psy6613 266 C-------PQEMFDVILDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 266 ~-------~~~~FD~VIvND--dLd~A~~eL~~ile 292 (510)
. .+..||++|..+ +++++++.+.++++
T Consensus 182 ~ytg~~~~~~~~~dl~IdT~~l~~eevv~~I~~~i~ 217 (223)
T 3hdt_A 182 YFTGSEWHSMKNYDLPINTTKLTLEETAELIKAYIR 217 (223)
T ss_dssp HHHSSCTTCGGGCSEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCcccCeEEEECCCCCHHHHHHHHHHHHH
Confidence 1 124689999876 58889888886665
No 322
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=95.11 E-value=0.0095 Score=66.41 Aligned_cols=44 Identities=25% Similarity=0.632 Sum_probs=34.3
Q ss_pred ccCCCCCccccCCC-----cceEEeCCCCCCchhHHHHHHHHHHHHhhhcCCcEE
Q psy6613 402 KQETTTPYDVVPSM-----RPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRII 451 (510)
Q Consensus 402 ~~~~~~~y~~~p~~-----rp~~~~gp~~~~~~~~~~m~~al~~~l~~~f~~~i~ 451 (510)
..+..+||+.|+.| |||||+||+ | +-+.++|++.+.++|..-|.
T Consensus 513 ~~~~~~~Ye~V~~~~~~~~r~vvl~GP~-K-----~tl~~~L~~~~~~~~~~~vs 561 (721)
T 2xkx_A 513 REDSVLSYETVTQMEVHYARPIIILGPT-K-----DRANDDLLSEFPDKFGSCVP 561 (721)
T ss_pred ccccCCCceeeecccCCCCCEEEEECCC-H-----HHHHHHHHHhCccceeeccc
Confidence 46788999999988 999999997 4 34667788877777766543
No 323
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=94.82 E-value=0.099 Score=47.92 Aligned_cols=138 Identities=13% Similarity=0.078 Sum_probs=66.3
Q ss_pred CCeE--EecCcCChHHHHHHHhc-C--CCCce-eeecCCCchh------h-hhhhc----ccHHHHHHHHHcCCeEEEEe
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-N--PSKRA-IMERSNSRSS------V-LTEVQ----TEIERVYELASTLQLVVLDC 209 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~--P~~F~-~sVshTTR~p------F-e~~I~----TslesI~~vi~sGKi~ILDI 209 (510)
+.+| +||+|+||||+.+.|.. . +.... +.-...-|.. | .+... .-.+........|..+|.+.
T Consensus 25 g~~i~l~G~sGsGKSTl~~~La~~l~~~G~~~~~~d~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~ 104 (200)
T 3uie_A 25 GCVIWVTGLSGSGKSTLACALNQMLYQKGKLCYILDGDNVRHGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIASL 104 (200)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHhcCceEEEecCchhhhHhhcccCcChHHHHHHHHHHHHHHHHHHhCCceEEEec
Confidence 4454 89999999999998876 2 22211 1111100110 0 00100 11122334456788888665
Q ss_pred ccCC-chhHhhhcCC---CceEEEEeCCCHHHHHHHH------HhcCCCcHHHHHHHHHHHHHHHhcC--CCCccEEEeC
Q psy6613 210 DTIN-HPSQLAKTNL---SPCIVYLKISSPKVLQRLI------KSRGKSQTRHLNVQMVAAEKLAQCP--QEMFDVILDE 277 (510)
Q Consensus 210 D~qg-~~lq~lks~l---~PivIFIkPPS~e~L~~rL------r~Rgt~~~e~i~kRL~aa~eLEq~~--~~~FD~VIvN 277 (510)
-... .....++..+ ..++||+.. +.+++.+|+ +.|...... ...+...| +..-|++|..
T Consensus 105 ~~~~~~~r~~~~~~~~~~~~~~v~L~a-~~e~~~~R~~~~l~~~~r~~~~~~--------~~~~~~~~~~~~~~~~~idt 175 (200)
T 3uie_A 105 ISPYRTDRDACRSLLPEGDFVEVFMDV-PLSVCEARDPKGLYKLARAGKIKG--------FTGIDDPYEPPLNCEISLGR 175 (200)
T ss_dssp CCCCHHHHHHHHHTSCTTSEEEEEECC-CHHHHHHHCTTSHHHHHHTTSSCS--------CBTTTBCCCCCSSCSEEECC
T ss_pred CCchHHHHHHHHHhcCCCCEEEEEEeC-CHHHHHHhcccchHHHHhcCCCCC--------CCCCCCcCcCCCCCCEEEec
Confidence 3321 0122233322 234577776 578887775 211111000 00112222 1235678864
Q ss_pred C---CHHHHHHHHHHHHHH
Q psy6613 278 N---QLEDACEHIAEYLEA 293 (510)
Q Consensus 278 D---dLd~A~~eL~~ilea 293 (510)
+ +++++++++.++|..
T Consensus 176 ~~~~~~~e~v~~i~~~l~~ 194 (200)
T 3uie_A 176 EGGTSPIEMAEKVVGYLDN 194 (200)
T ss_dssp SSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 3 788888888866643
No 324
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=94.80 E-value=0.047 Score=56.03 Aligned_cols=57 Identities=0% Similarity=-0.086 Sum_probs=39.2
Q ss_pred EecCcCChHHHHHHHhc-CC------CCc--eeeecCCCchh-hhh----------------hhc------ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NP------SKR--AIMERSNSRSS-VLT----------------EVQ------TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P------~~F--~~sVshTTR~p-Fe~----------------~I~------TslesI~~v 198 (510)
+||+|+|||||..+|.. .+ +.| ....+.+|++| .++ .+. .....+.++
T Consensus 13 ~GptgSGKTtla~~La~~l~~~iis~Ds~qvYr~~~i~Takp~~eE~~~v~hhl~di~~~~~~~~~~dF~~~a~~~i~~i 92 (340)
T 3d3q_A 13 VGPTASGKTELSIEVAKKFNGEIISGDSMQVYQGMDIGTAKVTTEEMEGIPHYMIDILPPDASFSAYEFKKRAEKYIKDI 92 (340)
T ss_dssp ECSTTSSHHHHHHHHHHHTTEEEEECCSSTTBTTCCTTTTCCCTTTTTTCCEESSSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ECCCcCcHHHHHHHHHHHcCCceeccccccccccccccccCCCHHHHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHHH
Confidence 89999999999999887 44 122 33456677766 111 000 355677788
Q ss_pred HHcCCeEEE
Q psy6613 199 ASTLQLVVL 207 (510)
Q Consensus 199 i~sGKi~IL 207 (510)
...|+.+|+
T Consensus 93 ~~~g~~~Il 101 (340)
T 3d3q_A 93 TRRGKVPII 101 (340)
T ss_dssp HHTTCEEEE
T ss_pred HhCCCcEEE
Confidence 889999998
No 325
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=94.53 E-value=0.036 Score=56.49 Aligned_cols=59 Identities=7% Similarity=-0.005 Sum_probs=41.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceee--------ecCCCchhhhhh----------------------hc-ccHHHHHHH
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIM--------ERSNSRSSVLTE----------------------VQ-TEIERVYEL 198 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~s--------VshTTR~pFe~~----------------------I~-TslesI~~v 198 (510)
+||+|+|||||...|.+ .+..+..+ .+.+|++|-.++ +. ...+.|.++
T Consensus 11 ~GptGsGKTtla~~La~~l~~~iis~Ds~qvy~~~~igTakp~~~e~~gvph~lid~~~~~~~~~~~~F~~~a~~~i~~i 90 (323)
T 3crm_A 11 MGPTAAGKTDLAMALADALPCELISVDSALIYRGMDIGTAKPSRELLARYPHRLIDIRDPAESYSAAEFRADALAAMAKA 90 (323)
T ss_dssp ECCTTSCHHHHHHHHHHHSCEEEEEECTTTTBTTCCTTTTCCCHHHHHHSCEETSSCBCTTSCCCHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHcCCcEEeccchhhhcCCCcccCCCCHHHHcCCCEEEeeccCcccccCHHHHHHHHHHHHHHH
Confidence 99999999999999987 44222221 366788771111 00 456778889
Q ss_pred HHcCCeEEEEe
Q psy6613 199 ASTLQLVVLDC 209 (510)
Q Consensus 199 i~sGKi~ILDI 209 (510)
...|+++|+--
T Consensus 91 ~~~g~~~IlvG 101 (323)
T 3crm_A 91 TARGRIPLLVG 101 (323)
T ss_dssp HHTTCEEEEEE
T ss_pred HHcCCeEEEEC
Confidence 99999999965
No 326
>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Probab=94.29 E-value=0.017 Score=57.79 Aligned_cols=44 Identities=23% Similarity=0.609 Sum_probs=35.1
Q ss_pred ccCCCCCccccCCC-----cceEEeCCCCCCchhHHHHHHHHHHHHhhhcCCcEE
Q psy6613 402 KQETTTPYDVVPSM-----RPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRII 451 (510)
Q Consensus 402 ~~~~~~~y~~~p~~-----rp~~~~gp~~~~~~~~~~m~~al~~~l~~~f~~~i~ 451 (510)
..+..+||+.|+.| |||||+||+ -|.+.++|++.+..+|.--|.
T Consensus 87 ~~~~~~~Ye~V~~~~~~~~r~ivl~GPg------K~tl~~~L~~~~~~~~~~~vs 135 (295)
T 1kjw_A 87 REDSVLSYETVTQMEVHYARPIIILGPT------KDRANDDLLSEFPDKFGSCVP 135 (295)
T ss_dssp CCCCCCCEEEEEEEECCSCCCEEEESTT------HHHHHHHHHHHCTTTEECCCC
T ss_pred ccCCCCCcceeeeecCCCCCEEEEECCC------HHHHHHHHHhhCccceeeeee
Confidence 46688999999987 999999993 577888888877667765443
No 327
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=94.28 E-value=0.078 Score=47.43 Aligned_cols=64 Identities=11% Similarity=0.133 Sum_probs=33.3
Q ss_pred eEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcC--CCCccEEEeCC--CHHHHHHHHHHHHH
Q psy6613 226 CIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQCP--QEMFDVILDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 226 ivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq~~--~~~FD~VIvND--dLd~A~~eL~~ile 292 (510)
++||+.. +.+++.+|+..+. ..+....++.....+...| ....|++|.|+ ++++..+++.++++
T Consensus 107 ~~i~l~~-~~e~~~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ad~vid~~~~~~~~~~~~i~~~l~ 174 (179)
T 2pez_A 107 FEVFVDA-PLHVCEQRDVKGL--YKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCDVNDCVQQVVELLQ 174 (179)
T ss_dssp EEEEEEC-CHHHHHHHCTTSH--HHHHHTTSSCSCBTTTBCCCCCSSCSEEEETTTSCHHHHHHHHHHHHH
T ss_pred EEEEEeC-CHHHHHHHHhhhh--HHHHhcccccccccCCccccCCCCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 5677776 4777777764321 0000000111001111111 24578999886 58888888885553
No 328
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=94.26 E-value=1 Score=42.52 Aligned_cols=92 Identities=14% Similarity=0.178 Sum_probs=47.8
Q ss_pred CCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHhc---CCCcHHHHHHHHHH-HH-HHH---hcCCCCccE
Q psy6613 202 LQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKSR---GKSQTRHLNVQMVA-AE-KLA---QCPQEMFDV 273 (510)
Q Consensus 202 GKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~R---gt~~~e~i~kRL~a-a~-eLE---q~~~~~FD~ 273 (510)
-+++|||.-.-. ....+. .+.-..|||..+....+.+++... |. +.+++..++.. .+ ..+ .-....-|+
T Consensus 134 ~~~lilDg~~~~-~~~~l~-~~~~~~i~v~th~~~~~~r~~~r~~~~G~-~~e~~~~~~~~~~~~~~~~~i~p~~~~aD~ 210 (245)
T 2jeo_A 134 ADVVLFEGILVF-YSQEIR-DMFHLRLFVDTDSDVRLSRRVLRDVRRGR-DLEQILTQYTTFVKPAFEEFCLPTKKYADV 210 (245)
T ss_dssp CSEEEEECTTTT-TSHHHH-TTCSEEEEEECCHHHHHHHHHHHHTC----CHHHHHHHHHHTHHHHHHHHTGGGGGGCSE
T ss_pred CCEEEEeCcccc-ccHHHH-HhcCeEEEEECCHHHHHHHHHHHHHHcCC-CHHHHHHHHHHhhhHhHHHhCCcchhcceE
Confidence 347778732111 011122 234577888888766676665543 54 34555555521 11 111 111256799
Q ss_pred EEeC--CCHHHHHHHHHHHHHHHHHh
Q psy6613 274 ILDE--NQLEDACEHIAEYLEAYWRA 297 (510)
Q Consensus 274 VIvN--DdLd~A~~eL~~ileai~~a 297 (510)
||.+ |+ +.++++|.+.+..++..
T Consensus 211 vi~~~~dn-~~~~~~l~~~i~~~~~~ 235 (245)
T 2jeo_A 211 IIPRGVDN-MVAINLIVQHIQDILNG 235 (245)
T ss_dssp EEESSTTC-HHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCc-cHHHHHHHHHHHHHHhc
Confidence 9943 34 66777777766677653
No 329
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=94.23 E-value=0.12 Score=46.47 Aligned_cols=133 Identities=16% Similarity=0.093 Sum_probs=63.5
Q ss_pred EecCcCChHHHHHHHhc-CCC----CceeeecCC-Cchhhhhhhc-ccHHHHHHHHHcCCeEEEEeccCCchhH-----h
Q psy6613 151 ITRVTADISLAKRSLMS-NPS----KRAIMERSN-SRSSVLTEVQ-TEIERVYELASTLQLVVLDCDTINHPSQ-----L 218 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~----~F~~sVshT-TR~pFe~~I~-TslesI~~vi~sGKi~ILDID~qg~~lq-----~ 218 (510)
+||+|+||||+.+.++. ..- .+.-.+.-+ ....+..... .-..........|...++|--......+ +
T Consensus 15 ~G~nGsGKSTl~~~~~~~~~~~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~s~g~~qrv~i 94 (171)
T 4gp7_A 15 IGSSGSGKSTFAKKHFKPTEVISSDFCRGLMSDDENDQTVTGAAFDVLHYIVSKRLQLGKLTVVDATNVQESARKPLIEM 94 (171)
T ss_dssp ECCTTSCHHHHHHHHSCGGGEEEHHHHHHHHCSSTTCGGGHHHHHHHHHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHccCCeEEccHHHHHHhcCcccchhhHHHHHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHH
Confidence 99999999999995432 100 000000000 0000111111 1122344556788888888654331111 1
Q ss_pred hhc-CCCceEEEEeCCCHHHHHHHHHhcCC-CcHHHHHHHH-HHHHH-HHhcCCCCccEEEeCCCHHHHH
Q psy6613 219 AKT-NLSPCIVYLKISSPKVLQRLIKSRGK-SQTRHLNVQM-VAAEK-LAQCPQEMFDVILDENQLEDAC 284 (510)
Q Consensus 219 lks-~l~PivIFIkPPS~e~L~~rLr~Rgt-~~~e~i~kRL-~aa~e-LEq~~~~~FD~VIvNDdLd~A~ 284 (510)
.+. ...|.++++--| ...|-.+.+.|.. .-.++...++ ..-.+ |.......+..|++.+|++.+.
T Consensus 95 Aral~~~p~~lllDEP-t~~Ld~~~~~R~~~~~~~~vi~~~~~~l~~~l~~l~~~g~tvi~vtH~~~~~~ 163 (171)
T 4gp7_A 95 AKDYHCFPVAVVFNLP-EKVCQERNKNRTDRQVEEYVIRKHTQQMKKSIKGLQREGFRYVYILNSPEEVE 163 (171)
T ss_dssp HHHTTCEEEEEEECCC-HHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHSTTHHHHTCSEEEEECSHHHHH
T ss_pred HHHcCCcEEEEEEeCC-HHHHHHHHhcccCCCCCHHHHHHHHHHhhhhhhhHHhcCCcEEEEeCCHHHhh
Confidence 122 346777777766 4556666555532 1122222222 11111 1111113689999999998763
No 330
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=93.71 E-value=0.067 Score=50.43 Aligned_cols=69 Identities=20% Similarity=0.309 Sum_probs=27.8
Q ss_pred eEEEEeCCCHHHHHHHHHhcCCCcH----HHHHHHH-HHHHHHHhcC--CCCcc-EEEeCC-CHHHHHHHHHHHHHHHH
Q psy6613 226 CIVYLKISSPKVLQRLIKSRGKSQT----RHLNVQM-VAAEKLAQCP--QEMFD-VILDEN-QLEDACEHIAEYLEAYW 295 (510)
Q Consensus 226 ivIFIkPPS~e~L~~rLr~Rgt~~~----e~i~kRL-~aa~eLEq~~--~~~FD-~VIvND-dLd~A~~eL~~ileai~ 295 (510)
.+||+..| .+++.+|+..||...+ .+..+++ ..-.++...| ...-+ ++|.++ ++++.++++.++++.++
T Consensus 149 ~vi~Ld~~-~e~~~~Ri~~R~r~~e~~~~~~~~~rv~~~~~~~~~~~~~~~~~~~~vId~~~~~eev~~~I~~~l~~~~ 226 (230)
T 2vp4_A 149 LIIYLRTS-PEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLNLENIGTEYQRSESSIF 226 (230)
T ss_dssp EEEEEECC-HHHHHHHHHHHCCGGGTTCCHHHHHHHHHHHHHHHTSCCSSCCCEEEEEECCC-----------------
T ss_pred EEEEEeCC-HHHHHHHHHHcCCcccccCcHHHHHHHHHHHHHHHHHhcccCCCCEEEEECCCCHHHHHHHHHHHHHHHh
Confidence 57777775 6777777777664322 1456667 3334443322 22234 555544 68888888876665443
No 331
>3gmt_A Adenylate kinase; ssgcid, ATP-BIN cytoplasm, nucleotide biosynthesis, nucleotide-BIND transferase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=93.35 E-value=0.13 Score=50.06 Aligned_cols=94 Identities=11% Similarity=0.005 Sum_probs=50.7
Q ss_pred EEecCcCChHHHHHHHhcCCCCceeeecCCCch------hhhhhhc------------ccHHHHHHHHHc---CCeEEEE
Q psy6613 150 IITRVTADISLAKRSLMSNPSKRAIMERSNSRS------SVLTEVQ------------TEIERVYELAST---LQLVVLD 208 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~------pFe~~I~------------TslesI~~vi~s---GKi~ILD 208 (510)
|+||+|+||+|+.++|.+....-.++...--|. +.-..+. .-.+-|.+.+.+ ++-.|||
T Consensus 13 ~~G~pGsGKsT~a~~L~~~~g~~~is~gdllR~~~~~~t~lG~~i~~~~~~G~lvpdei~~~ll~~~l~~~~~~~g~ILD 92 (230)
T 3gmt_A 13 LLGAPGAGKGTQANFIKEKFGIPQISTGDMLRAAVKAGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFD 92 (230)
T ss_dssp EECCTTSCHHHHHHHHHHHHTCCEECHHHHHHHHHHTTCHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHSGGGTTCEEEE
T ss_pred eECCCCCCHHHHHHHHHHHhCCCeeechHHHHHhccCCChHHHHHHHHHhhccccccHHHHHHHHHHHhCcccCCCeEec
Confidence 399999999999999887111111111100121 1000110 122334444443 4568999
Q ss_pred eccCCchhHh---hhc-CCCc-eEEEEeCCCHHHHHHHHHhcC
Q psy6613 209 CDTINHPSQL---AKT-NLSP-CIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 209 ID~qg~~lq~---lks-~l~P-ivIFIkPPS~e~L~~rLr~Rg 246 (510)
--|.. ... +.. ...| .+||+..| .+++.+|+.+|+
T Consensus 93 GfPRt--~~Qa~~L~~~~~~~d~VI~Ldvp-~e~l~~Rl~~R~ 132 (230)
T 3gmt_A 93 GFPRT--IAQADAMKEAGVAIDYVLEIDVP-FSEIIERMSGRR 132 (230)
T ss_dssp SCCCS--HHHHHHHHHTTCCCSEEEEECCC-HHHHHHHHHTEE
T ss_pred CCCCc--HHHHHHHHHhCCCccEEEEEeCC-HHHHHHHHHcCC
Confidence 87765 322 333 3333 67888776 577888887764
No 332
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A*
Probab=93.32 E-value=0.21 Score=53.67 Aligned_cols=45 Identities=16% Similarity=0.177 Sum_probs=31.1
Q ss_pred HcCCeEEEEeccCCchhHhh-------hc-CCCceEEEEeCCCHHHHHHHHHhcC
Q psy6613 200 STLQLVVLDCDTINHPSQLA-------KT-NLSPCIVYLKISSPKVLQRLIKSRG 246 (510)
Q Consensus 200 ~sGKi~ILDID~qg~~lq~l-------ks-~l~PivIFIkPPS~e~L~~rLr~Rg 246 (510)
..|..+|+|.-.-+ .... +. .+..++|++..++.+.+++|++.|.
T Consensus 117 ~~g~~VIvDat~~~--~~~R~~~~~~a~~~g~~v~~l~~~~~d~e~i~~ri~~r~ 169 (520)
T 2axn_A 117 EGGQIAVFDATNTT--RERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVK 169 (520)
T ss_dssp SCCCEEEEESCCCS--HHHHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHHHHHT
T ss_pred cCCceEEecCCCCC--HHHHHHHHHHHHHcCCeEEEEEEeCChHHHHHHHHHhhh
Confidence 57999999997655 2221 11 3335567777788999999996554
No 333
>1p5z_B DCK, deoxycytidine kinase; nucleoside kinase, P-loop, ARAC, cytarabine, transferase; HET: AR3 ADP; 1.60A {Homo sapiens} SCOP: c.37.1.1 PDB: 1p60_A* 1p61_B* 1p62_B* 2a7q_A* 2qrn_A* 2qro_A* 3exk_A* 3hp1_A* 2no7_A* 2no1_A* 2no6_A* 2no0_A* 2no9_A* 2noa_A* 2zi5_A* 2zi4_A* 2zi6_A* 2zi7_B* 2zia_A* 3kfx_A* ...
Probab=93.01 E-value=0.19 Score=48.15 Aligned_cols=70 Identities=21% Similarity=0.309 Sum_probs=39.0
Q ss_pred eEEEEeCCCHHHHHHHHHhcCCCc----HHHHHHHH-HHHHHHHh------cC---CCCccEEEe-CCCHHHHHHHHHHH
Q psy6613 226 CIVYLKISSPKVLQRLIKSRGKSQ----TRHLNVQM-VAAEKLAQ------CP---QEMFDVILD-ENQLEDACEHIAEY 290 (510)
Q Consensus 226 ivIFIkPPS~e~L~~rLr~Rgt~~----~e~i~kRL-~aa~eLEq------~~---~~~FD~VIv-NDdLd~A~~eL~~i 290 (510)
++||+..| .+++.+|+..||... ..+...++ ..-++... .| ...-.++|. +.++++.++++.++
T Consensus 177 ~vi~L~~~-~e~~~~Ri~~R~r~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~y~~~~~~~~~~Id~~~~~eev~~~I~~~ 255 (263)
T 1p5z_B 177 GIIYLQAT-PETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYESLVEK 255 (263)
T ss_dssp EEEEEECC-HHHHHHHHHHHCCGGGTTCCHHHHHHHHHHHHHHHTTCCCCCSCGGGGGSCEEEEECCSCHHHHHHHHHHH
T ss_pred eEEEEECC-HHHHHHHHHhcCCccccCccHHHHHHHHHHHHHHHhhccchhhhhhhccCCEEEEECCCCHHHHHHHHHHH
Confidence 57777775 788888887776421 23444555 22222211 11 011134443 35689888888877
Q ss_pred HHHHHH
Q psy6613 291 LEAYWR 296 (510)
Q Consensus 291 leai~~ 296 (510)
|...+.
T Consensus 256 l~~~l~ 261 (263)
T 1p5z_B 256 VKEFLS 261 (263)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766543
No 334
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=92.81 E-value=0.21 Score=55.25 Aligned_cols=142 Identities=12% Similarity=0.092 Sum_probs=68.5
Q ss_pred CCeE--EecCcCChHHHHHHHhc-C---CCCceeeecCCCchh------hh-----hhhcccHHHHHHHHHcCCeEEEEe
Q psy6613 147 GMII--ITRVTADISLAKRSLMS-N---PSKRAIMERSNSRSS------VL-----TEVQTEIERVYELASTLQLVVLDC 209 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~-~---P~~F~~sVshTTR~p------Fe-----~~I~TslesI~~vi~sGKi~ILDI 209 (510)
+++| +|++|+||||+.+.|-+ . --.|...-....|.. |. +.+..-.+.++..++.|.+||.|.
T Consensus 52 g~lIvLtGlsGSGKSTlAr~La~~L~~~G~~~v~lDgD~iR~~L~~~~~fs~~dree~~r~i~eva~~~l~~G~iVI~d~ 131 (630)
T 1x6v_B 52 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIAEVAKLFADAGLVCITSF 131 (630)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEESHHHHTTTTTTTCCSSHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEechHHhhhccCccccCChhhhHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 4444 89999999999998765 2 111221111111111 11 011111122344567899999873
Q ss_pred c-cC-C---chhHhhhc-CCCceEEEEeCCCHHHHHHHHHhcCCCcHHHHH-HHHHHHHHHHhcCC--CCccEEEeCC--
Q psy6613 210 D-TI-N---HPSQLAKT-NLSPCIVYLKISSPKVLQRLIKSRGKSQTRHLN-VQMVAAEKLAQCPQ--EMFDVILDEN-- 278 (510)
Q Consensus 210 D-~q-g---~~lq~lks-~l~PivIFIkPPS~e~L~~rLr~Rgt~~~e~i~-kRL~aa~eLEq~~~--~~FD~VIvND-- 278 (510)
- +- . ...++++. ...-++||+.. +.+++.+|+.++. -+... ..+..-..+...|. ...|++|.++
T Consensus 132 ~s~~~~~r~~~r~ll~~~g~p~~vV~Lda-p~Evl~~Rl~r~l---y~~aR~~~~~~~~~~~~~Ye~p~~~dlvIDts~~ 207 (630)
T 1x6v_B 132 ISPYTQDRNNARQIHEGASLPFFEVFVDA-PLHVCEQRDVKGL---YKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSC 207 (630)
T ss_dssp CCCCHHHHHHHHHHHHTTTCCEEEEEEEC-CHHHHHHHCTTSH---HHHHTTC----CBTTTBCCCCCSSCSEEEETTSS
T ss_pred chhhHHHHHHHHHHHHhCCCCeEEEEEEC-CHHHHHHHhcccc---chhhhhhhHHHHHHhhhhhcccCCCcEEEECCCC
Confidence 1 10 0 00111122 22345777776 5788888864210 00000 00000011223332 4568888775
Q ss_pred CHHHHHHHHHHHHH
Q psy6613 279 QLEDACEHIAEYLE 292 (510)
Q Consensus 279 dLd~A~~eL~~ile 292 (510)
+++++++++.++|.
T Consensus 208 s~eevv~~Il~~L~ 221 (630)
T 1x6v_B 208 DVNDCVQQVVELLQ 221 (630)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 68888888886654
No 335
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=92.56 E-value=0.64 Score=44.96 Aligned_cols=92 Identities=14% Similarity=0.195 Sum_probs=49.0
Q ss_pred HHHHcCCeEEEEeccCCchhHhhhcCCCceEEEEeCCCHHHHHHHHHh----cCCCcHHHHHHHHHHHHHHHh--c--CC
Q psy6613 197 ELASTLQLVVLDCDTINHPSQLAKTNLSPCIVYLKISSPKVLQRLIKS----RGKSQTRHLNVQMVAAEKLAQ--C--PQ 268 (510)
Q Consensus 197 ~vi~sGKi~ILDID~qg~~lq~lks~l~PivIFIkPPS~e~L~~rLr~----Rgt~~~e~i~kRL~aa~eLEq--~--~~ 268 (510)
++++++..||+|---.| .-++.. ..+-|||..|--...++|.+. +...+.+++...|..-.+... . .-
T Consensus 123 ~~a~~~~~~V~~GRd~g--t~V~pd--a~lkifl~A~~e~Ra~Rr~~~l~~~~~~~~~~~~~~~i~~rD~~d~~r~~~pl 198 (233)
T 3r20_A 123 KLATEGGRVVVEGRDIG--TVVLPD--ADVKIFLTASAEERARRRNAQNVANGLPDDYATVLADVQRRDHLDSTRPVSPL 198 (233)
T ss_dssp HHHTSSSCEEEEESSCC--CCCCTT--CSEEEEEECCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HHHHhcCcEEEecccce--eEEcCC--CCEEEEEECCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHhhhhcccccc
Confidence 34444267888665444 112221 458899999866666665541 223345666666633333221 1 12
Q ss_pred CCcc--EEEeCC--CHHHHHHHHHHHHH
Q psy6613 269 EMFD--VILDEN--QLEDACEHIAEYLE 292 (510)
Q Consensus 269 ~~FD--~VIvND--dLd~A~~eL~~ile 292 (510)
..+| ++|.+. +++++++.+.++++
T Consensus 199 ~~~~dal~IDTs~l~iee~v~~I~~~i~ 226 (233)
T 3r20_A 199 RAADDALVVDTSDMDQAQVIAHLLDLVT 226 (233)
T ss_dssp SCCTTSEEEECTTSCHHHHHHHHHHHC-
T ss_pred ccccCcEEEECCCCCHHHHHHHHHHHHH
Confidence 3455 677654 46777777775543
No 336
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=91.02 E-value=0.3 Score=51.35 Aligned_cols=24 Identities=0% Similarity=-0.094 Sum_probs=18.8
Q ss_pred EEecCcCChHHHHHHHhc-CCCCce
Q psy6613 150 IITRVTADISLAKRSLMS-NPSKRA 173 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~-~P~~F~ 173 (510)
|.||+|+||||+.+.|.+ ....|.
T Consensus 55 L~GppGtGKTtlAr~ia~~~~~~f~ 79 (447)
T 3pvs_A 55 LWGPPGTGKTTLAEVIARYANADVE 79 (447)
T ss_dssp EECSTTSSHHHHHHHHHHHTTCEEE
T ss_pred EECCCCCcHHHHHHHHHHHhCCCeE
Confidence 389999999999998887 433343
No 337
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=90.74 E-value=0.83 Score=44.73 Aligned_cols=25 Identities=0% Similarity=-0.134 Sum_probs=19.3
Q ss_pred eEEecCcCChHHHHHHHhc-CCCCce
Q psy6613 149 IIITRVTADISLAKRSLMS-NPSKRA 173 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~-~P~~F~ 173 (510)
+|.||+|+|||++.+.+.. ....|.
T Consensus 59 ll~G~~GtGKT~la~~ia~~~~~~~~ 84 (338)
T 3pfi_A 59 LFSGPAGLGKTTLANIISYEMSANIK 84 (338)
T ss_dssp EEECSTTSSHHHHHHHHHHHTTCCEE
T ss_pred EEECcCCCCHHHHHHHHHHHhCCCeE
Confidence 3499999999999999887 433343
No 338
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=89.92 E-value=0.26 Score=43.36 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=24.1
Q ss_pred CCeE-EecCcCChHHHHHHHhcCCCCceeeecCCCch
Q psy6613 147 GMII-ITRVTADISLAKRSLMSNPSKRAIMERSNSRS 182 (510)
Q Consensus 147 ~RpI-~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~ 182 (510)
.+++ +|++|||||||.++|+..........+.+|+.
T Consensus 24 ~~i~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~t~~ 60 (195)
T 3pqc_A 24 GEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRS 60 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHTSCCSCCCSSCCCCCC
T ss_pred eEEEEECCCCCCHHHHHHHHHcCccccccCCCCCccC
Confidence 4565 99999999999999998221222233445554
No 339
>2gj8_A MNME, tRNA modification GTPase TRME; G-domain dimer, alpha-beta-sandwich, hydrolase; HET: GDP; 1.70A {Escherichia coli BL21} SCOP: c.37.1.8 PDB: 2gj9_A* 2gja_A* 1rfl_A
Probab=89.85 E-value=0.21 Score=44.32 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=23.1
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS 183 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p 183 (510)
+|++|||||||.++|.. .. .+....+.||+..
T Consensus 10 vG~~g~GKStLl~~l~~~~~-~~~~~~~~~t~~~ 42 (172)
T 2gj8_A 10 AGRPNAGKSSLLNALAGREA-AIVTDIAGTTRDV 42 (172)
T ss_dssp EESTTSSHHHHHHHHHTSCC-SCCCSSTTCCCSC
T ss_pred ECCCCCCHHHHHHHHhCCCc-ceeeCCCCceece
Confidence 99999999999999987 32 1223345666654
No 340
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=89.70 E-value=0.29 Score=46.71 Aligned_cols=19 Identities=5% Similarity=0.158 Sum_probs=17.0
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+|||++.+.|..
T Consensus 55 ll~G~~GtGKT~la~~la~ 73 (285)
T 3h4m_A 55 LLYGPPGTGKTLLAKAVAT 73 (285)
T ss_dssp EEESSSSSSHHHHHHHHHH
T ss_pred EEECCCCCcHHHHHHHHHH
Confidence 3499999999999999887
No 341
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=89.41 E-value=0.18 Score=42.99 Aligned_cols=35 Identities=14% Similarity=0.088 Sum_probs=19.0
Q ss_pred CeE-EecCcCChHHHHHHHhcCCCCceeeecCCCch
Q psy6613 148 MII-ITRVTADISLAKRSLMSNPSKRAIMERSNSRS 182 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~ 182 (510)
+++ +|++|+|||||.++|+.....+....+.||+.
T Consensus 3 ki~v~G~~~~GKSsli~~l~~~~~~~~~~~~~~~~~ 38 (161)
T 2dyk_A 3 KVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRD 38 (161)
T ss_dssp EEEEECCTTSSHHHHHHHHHHCCC-----------C
T ss_pred EEEEECCCCCCHHHHHHHHhCCCeeeccCCCCceec
Confidence 444 99999999999999998221222333444443
No 342
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=89.00 E-value=0.19 Score=46.30 Aligned_cols=21 Identities=10% Similarity=0.026 Sum_probs=17.9
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
+.+| +||+|+|||||.+.|..
T Consensus 22 g~~v~I~G~sGsGKSTl~~~l~~ 44 (208)
T 3c8u_A 22 RQLVALSGAPGSGKSTLSNPLAA 44 (208)
T ss_dssp CEEEEEECCTTSCTHHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHH
Confidence 4455 99999999999998876
No 343
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=87.69 E-value=0.61 Score=43.59 Aligned_cols=18 Identities=6% Similarity=0.178 Sum_probs=16.4
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|.||+|+|||++.+.|..
T Consensus 44 l~G~~GtGKT~la~~la~ 61 (262)
T 2qz4_A 44 LLGPPGCGKTLLAKAVAT 61 (262)
T ss_dssp EESCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 399999999999998877
No 344
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=87.56 E-value=0.26 Score=43.31 Aligned_cols=62 Identities=18% Similarity=0.218 Sum_probs=30.9
Q ss_pred eEEEEeCCCHHHHHHHHHhcCC-------Cc-HHHHHHHHHHHHHHHhcCCCCccEEEeCC--CHHHHHHHHHHHH
Q psy6613 226 CIVYLKISSPKVLQRLIKSRGK-------SQ-TRHLNVQMVAAEKLAQCPQEMFDVILDEN--QLEDACEHIAEYL 291 (510)
Q Consensus 226 ivIFIkPPS~e~L~~rLr~Rgt-------~~-~e~i~kRL~aa~eLEq~~~~~FD~VIvND--dLd~A~~eL~~il 291 (510)
++||+..| .+++.+|+..|+. +. .+.+...+.....+.. ..-|++|.|+ ++++.++++..++
T Consensus 99 ~~i~l~~~-~~~l~~R~~~r~~r~~~~~~~~~~~~~~~~~~~r~~~~~---~~a~~~id~~~~~~~~~~~~i~~~l 170 (173)
T 1kag_A 99 VVVYLETT-IEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYE---EIADVTIRTDDQSAKVVANQIIHML 170 (173)
T ss_dssp EEEECCCC-HHHHHSCC------CCSSSSCCCHHHHHHHHHHHHHHHH---HHCSEEC-----CHHHHHHHHHHHH
T ss_pred EEEEEeCC-HHHHHHHHhCCCCCCCCCCCCchHHHHHHHHHHHHHHHH---hhCCEEEECCCCCHHHHHHHHHHHH
Confidence 57777764 7788877766521 11 2333333332222211 2348898876 6888888887554
No 345
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=87.43 E-value=0.25 Score=51.36 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=22.2
Q ss_pred CeE-EecCcCChHHHHHHHhcCCCCceeeecCCCchh
Q psy6613 148 MII-ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS 183 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p 183 (510)
++. +|++|||||||.++|+.....+....+.|||.+
T Consensus 182 kvaivG~~gvGKSTLln~l~g~~~~~v~~~~gtT~d~ 218 (439)
T 1mky_A 182 KVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDP 218 (439)
T ss_dssp EEEEECSTTSSHHHHHHHHHTSTTEEECCCC------
T ss_pred eEEEECCCCCCHHHHHHHHhCCcccccCCCCCCcCCc
Confidence 444 999999999999999972212445577888876
No 346
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=87.43 E-value=0.28 Score=43.41 Aligned_cols=21 Identities=24% Similarity=0.091 Sum_probs=18.4
Q ss_pred CCeE-EecCcCChHHHHHHHhc
Q psy6613 147 GMII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI-~GPsGvGKsTL~~rLL~ 167 (510)
.+++ +|++|||||||.++|+.
T Consensus 24 ~~i~v~G~~~~GKSsli~~l~~ 45 (195)
T 1svi_A 24 PEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp CEEEEEEBTTSSHHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHhC
Confidence 3555 99999999999999997
No 347
>3q72_A GTP-binding protein RAD; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.66A {Homo sapiens} SCOP: c.37.1.8 PDB: 3q7p_A* 3q7q_A* 2gjs_A* 2dpx_A*
Probab=87.34 E-value=0.24 Score=42.47 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|..
T Consensus 4 ki~~vG~~~~GKSsli~~l~~ 24 (166)
T 3q72_A 4 KVLLLGAPGVGKSALARIFGG 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHcC
Confidence 444 99999999999999986
No 348
>2erx_A GTP-binding protein DI-RAS2; GTP hydrolysis, transport protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8
Probab=87.20 E-value=0.23 Score=42.52 Aligned_cols=20 Identities=5% Similarity=-0.129 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (172)
T 2erx_A 5 RVAVFGAGGVGKSSLVLRFVK 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 344 99999999999999997
No 349
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=86.69 E-value=0.69 Score=43.62 Aligned_cols=19 Identities=5% Similarity=0.218 Sum_probs=16.8
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+||||+.+.|..
T Consensus 49 ll~G~~GtGKT~la~~la~ 67 (257)
T 1lv7_A 49 LMVGPPGTGKTLLAKAIAG 67 (257)
T ss_dssp EEECCTTSCHHHHHHHHHH
T ss_pred EEECcCCCCHHHHHHHHHH
Confidence 3499999999999998876
No 350
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=86.29 E-value=0.4 Score=45.88 Aligned_cols=21 Identities=10% Similarity=0.037 Sum_probs=17.5
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 31 Ge~~~iiG~nGsGKSTLl~~l~G 53 (235)
T 3tif_A 31 GEFVSIMGPSGSGKSTMLNIIGC 53 (235)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHhc
Confidence 4444 99999999999998776
No 351
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=86.22 E-value=0.37 Score=44.57 Aligned_cols=20 Identities=5% Similarity=0.084 Sum_probs=16.8
Q ss_pred CCeE--EecCcCChHHHHHHHh
Q psy6613 147 GMII--ITRVTADISLAKRSLM 166 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL 166 (510)
|.++ +||+|+|||||.+.|+
T Consensus 30 G~~~~l~GpnGsGKSTLl~~i~ 51 (251)
T 2ehv_A 30 GTTVLLTGGTGTGKTTFAAQFI 51 (251)
T ss_dssp TCEEEEECCTTSSHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHH
Confidence 4444 9999999999999776
No 352
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=86.22 E-value=0.34 Score=50.23 Aligned_cols=38 Identities=26% Similarity=0.405 Sum_probs=28.6
Q ss_pred cCCCCCcccc-----CCCcceEEeCCCCCCchhHHHHHHHHHHHHhhhc
Q psy6613 403 QETTTPYDVV-----PSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRF 446 (510)
Q Consensus 403 ~~~~~~y~~~-----p~~rp~~~~gp~~~~~~~~~~m~~al~~~l~~~f 446 (510)
.+..++|+.| +..|||||.|||- +.+.++|++...+.|
T Consensus 215 ~~~~~~YE~V~~~~~~~~r~iVlsGPsg------~tl~~~L~~~~p~~~ 257 (391)
T 3tsz_A 215 QTKFPAYERVVLREAGFLRPVTIFGPIA------DVAREKLAREEPDIY 257 (391)
T ss_dssp --CCCSEEEEEEEECSSCCCEEEESTTH------HHHHHHHHHHCTTTE
T ss_pred cccCCCcceEECcCCCCCCEEEEECCCH------HHHHHHHHhhCcccc
Confidence 4567899999 8999999999994 567777777654433
No 353
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=86.10 E-value=0.32 Score=44.59 Aligned_cols=18 Identities=6% Similarity=0.051 Sum_probs=16.2
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|+||+|+|||||.+.|..
T Consensus 5 l~G~nGsGKTTLl~~l~g 22 (178)
T 1ye8_A 5 ITGEPGVGKTTLVKKIVE 22 (178)
T ss_dssp EECCTTSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 389999999999998876
No 354
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=85.86 E-value=0.47 Score=44.99 Aligned_cols=21 Identities=19% Similarity=0.009 Sum_probs=17.5
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 30 Ge~~~iiG~nGsGKSTLl~~l~G 52 (224)
T 2pcj_A 30 GEFVSIIGASGSGKSTLLYILGL 52 (224)
T ss_dssp TCEEEEEECTTSCHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhc
Confidence 3444 99999999999998776
No 355
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A
Probab=85.71 E-value=4.9 Score=41.93 Aligned_cols=45 Identities=13% Similarity=0.127 Sum_probs=27.3
Q ss_pred HcCCeEEEEeccCCch------hHhhhc-CCCceEEEEeCCCHHHHHHHHHhc
Q psy6613 200 STLQLVVLDCDTINHP------SQLAKT-NLSPCIVYLKISSPKVLQRLIKSR 245 (510)
Q Consensus 200 ~sGKi~ILDID~qg~~------lq~lks-~l~PivIFIkPPS~e~L~~rLr~R 245 (510)
..|.++|+|..-.. . .+.++. ....+++.+..++.+.+.+++..+
T Consensus 121 ~~G~~vV~D~tn~~-~~~R~~~~~~~~~~~~~vv~l~~~~~~~~~i~~r~~~~ 172 (469)
T 1bif_A 121 EGGHVAVFDATNTT-RERRAMIFNFGEQNGYKTFFVESICVDPEVIAANIVQV 172 (469)
T ss_dssp TCCSEEEEESCCCS-HHHHHHHHHHHHHHTCEEEEEEECCCCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC-HHHHHHHHHHHHhcCCcEEEEEEECCCHHHHHHHHHHh
Confidence 57889999997654 1 111222 222334444458889998887653
No 356
>2yv5_A YJEQ protein; hydrolase, GTPase, permutation, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: GDP; 1.90A {Aquifex aeolicus}
Probab=85.70 E-value=0.51 Score=46.75 Aligned_cols=21 Identities=19% Similarity=0.080 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
+.++ +||+|||||||.+.|+.
T Consensus 165 G~i~~l~G~sG~GKSTLln~l~~ 187 (302)
T 2yv5_A 165 GFICILAGPSGVGKSSILSRLTG 187 (302)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHS
T ss_pred CcEEEEECCCCCCHHHHHHHHHH
Confidence 4444 99999999999999874
No 357
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=85.69 E-value=0.84 Score=43.82 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=17.0
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+|||++.+.+..
T Consensus 58 ll~Gp~GtGKT~la~~la~ 76 (297)
T 3b9p_A 58 LLFGPPGNGKTLLARAVAT 76 (297)
T ss_dssp EEESSSSSCHHHHHHHHHH
T ss_pred EEECcCCCCHHHHHHHHHH
Confidence 4499999999999998887
No 358
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.60 E-value=0.53 Score=49.61 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=36.3
Q ss_pred CCCeEEecCcCChHHHHHHHhc--CCCCceeeecCCCchhhhhhhcccHHHHHHHHHcCCeEEEEecc
Q psy6613 146 PGMIIITRVTADISLAKRSLMS--NPSKRAIMERSNSRSSVLTEVQTEIERVYELASTLQLVVLDCDT 211 (510)
Q Consensus 146 ~~RpI~GPsGvGKsTL~~rLL~--~P~~F~~sVshTTR~pFe~~I~TslesI~~vi~sGKi~ILDID~ 211 (510)
+|-++.||+|+|||++.+.+.. .-.-|....+.. -..+..+-...+..++..++....||+-+|-
T Consensus 207 rGiLL~GPPGtGKT~lakAiA~~~~~~~~~v~~~~l-~~~~~Ge~e~~ir~lF~~A~~~aP~IifiDE 273 (428)
T 4b4t_K 207 RGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEF-VHKYLGEGPRMVRDVFRLARENAPSIIFIDE 273 (428)
T ss_dssp CEEEEESCTTTTHHHHHHHHHHHHTCEEEEEEGGGT-CCSSCSHHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred ceEEEECCCCCCHHHHHHHHHHHhCCCeEEEecchh-hccccchhHHHHHHHHHHHHHcCCCeeechh
Confidence 4445599999999999998887 222222222211 1111111113455566666666666666654
No 359
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=85.57 E-value=0.44 Score=44.56 Aligned_cols=20 Identities=20% Similarity=0.308 Sum_probs=18.0
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 31 ~i~lvG~~g~GKStlin~l~g 51 (239)
T 3lxx_A 31 RIVLVGKTGAGKSATGNSILG 51 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHcC
Confidence 454 99999999999999997
No 360
>2zej_A Dardarin, leucine-rich repeat kinase 2; parkinson'S disease, LRRK2, ROC, GTPase, ROCO, ATP-B disease mutation, GTP-binding, GTPase activation; HET: GDP; 2.00A {Homo sapiens} PDB: 3d6t_B*
Probab=85.53 E-value=0.35 Score=43.05 Aligned_cols=20 Identities=10% Similarity=0.189 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 4 kv~ivG~~gvGKStLl~~l~~ 24 (184)
T 2zej_A 4 KLMIVGNTGSGKTTLLQQLMK 24 (184)
T ss_dssp EEEEESCTTSSHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 344 99999999999999987
No 361
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=85.47 E-value=0.39 Score=43.39 Aligned_cols=19 Identities=11% Similarity=0.046 Sum_probs=17.1
Q ss_pred EecCcCChHHHHHHHhc-CC
Q psy6613 151 ITRVTADISLAKRSLMS-NP 169 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P 169 (510)
+||+|+|||||.+.|.. .|
T Consensus 39 ~G~nGaGKTTLlr~l~g~l~ 58 (158)
T 1htw_A 39 NGDLGAGKTTLTRGMLQGIG 58 (158)
T ss_dssp ECSTTSSHHHHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHHHhCC
Confidence 99999999999998877 54
No 362
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.46 E-value=0.65 Score=48.73 Aligned_cols=68 Identities=12% Similarity=0.131 Sum_probs=38.9
Q ss_pred CCCCCeEEecCcCChHHHHHHHhc-CCCCceeeecCCCchhhhhhhcccHHHHHHHHHcCCeEEEEecc
Q psy6613 144 PSPGMIIITRVTADISLAKRSLMS-NPSKRAIMERSNSRSSVLTEVQTEIERVYELASTLQLVVLDCDT 211 (510)
Q Consensus 144 Ps~~RpI~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~pFe~~I~TslesI~~vi~sGKi~ILDID~ 211 (510)
|.+|-++.||+|+|||.|.+.+.. .--.|...-...--..+..+-...+..++..++....||+-+|-
T Consensus 181 ~prGvLL~GPPGTGKTllAkAiA~e~~~~f~~v~~s~l~sk~vGese~~vr~lF~~Ar~~aP~IIFiDE 249 (405)
T 4b4t_J 181 QPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 249 (405)
T ss_dssp CCCCEEEESCSSSSHHHHHHHHHHHHTCEEEEEEGGGGSCSSTTHHHHHHHHHHHHHHHTCSEEEEEES
T ss_pred CCCceEEeCCCCCCHHHHHHHHHHhhCCCceEEEhHHhhccccchHHHHHHHHHHHHHHhCCceEeeec
Confidence 335556699999999999998887 22223222111111111111113456667777777777777664
No 363
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=85.39 E-value=0.78 Score=45.63 Aligned_cols=24 Identities=13% Similarity=0.277 Sum_probs=19.0
Q ss_pred CCCCCeEEecCcCChHHHHHHHhc
Q psy6613 144 PSPGMIIITRVTADISLAKRSLMS 167 (510)
Q Consensus 144 Ps~~RpI~GPsGvGKsTL~~rLL~ 167 (510)
|..+-++.||+|+|||++.+.+..
T Consensus 44 ~~~~iLL~GppGtGKT~la~ala~ 67 (322)
T 1xwi_A 44 PWRGILLFGPPGTGKSYLAKAVAT 67 (322)
T ss_dssp CCSEEEEESSSSSCHHHHHHHHHH
T ss_pred CCceEEEECCCCccHHHHHHHHHH
Confidence 333344599999999999998887
No 364
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=85.26 E-value=0.49 Score=41.90 Aligned_cols=20 Identities=15% Similarity=0.013 Sum_probs=18.1
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|..
T Consensus 50 ~i~vvG~~g~GKSsll~~l~~ 70 (193)
T 2ged_A 50 SIIIAGPQNSGKTSLLTLLTT 70 (193)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 455 99999999999999997
No 365
>1t9h_A YLOQ, probable GTPase ENGC; N-terminal beta-barrel domain with oligonucleotide binding fold, central GTP binding domain; 1.60A {Bacillus subtilis} SCOP: b.40.4.5 c.37.1.8
Probab=85.24 E-value=0.24 Score=49.94 Aligned_cols=21 Identities=5% Similarity=-0.107 Sum_probs=18.0
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
+.++ +||+|||||||.+.|+.
T Consensus 173 G~~~~lvG~sG~GKSTLln~L~g 195 (307)
T 1t9h_A 173 DKTTVFAGQSGVGKSSLLNAISP 195 (307)
T ss_dssp TSEEEEEESHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCCCCHHHHHHHhcc
Confidence 4444 99999999999999986
No 366
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=85.11 E-value=0.43 Score=43.55 Aligned_cols=17 Identities=6% Similarity=0.024 Sum_probs=15.7
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|..
T Consensus 31 ~G~nGsGKSTll~~l~g 47 (231)
T 4a74_A 31 FGEFGSGKTQLAHTLAV 47 (231)
T ss_dssp EESTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 99999999999998875
No 367
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=84.98 E-value=0.38 Score=43.32 Aligned_cols=17 Identities=12% Similarity=-0.089 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|..
T Consensus 11 vG~~g~GKSTLl~~l~~ 27 (199)
T 2f9l_A 11 IGDSGVGKSNLLSRFTR 27 (199)
T ss_dssp ESSTTSSHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHhc
Confidence 99999999999999987
No 368
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=84.97 E-value=0.91 Score=49.37 Aligned_cols=133 Identities=14% Similarity=0.095 Sum_probs=66.2
Q ss_pred EecCcCChHHHHHHHhc-CC----CCceeeecCCCchh------hh-hh----hcccHHHHHHHHHcCCeEEEEeccCCc
Q psy6613 151 ITRVTADISLAKRSLMS-NP----SKRAIMERSNSRSS------VL-TE----VQTEIERVYELASTLQLVVLDCDTINH 214 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P----~~F~~sVshTTR~p------Fe-~~----I~TslesI~~vi~sGKi~ILDID~qg~ 214 (510)
.|++|+||||+.+.|-+ .. -.|.+.-...-|.. |. ++ +..-.+.+..+++.|.+||.++-..-.
T Consensus 402 ~GlsGSGKSTiA~~La~~L~~~G~~~~~~lD~D~ir~~l~~~~~f~~~er~~~i~ri~~v~~~~~~~g~~VI~~~is~~~ 481 (573)
T 1m8p_A 402 TGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRIAFVATELTRAGAAVIAAPIAPYE 481 (573)
T ss_dssp ECSTTSSHHHHHHHHHHHHHHHCSSCEEEEEHHHHHHHTCTTCCCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCCCH
T ss_pred ecCCCCCHHHHHHHHHHHhcccCCceEEEECcHHHHHHhccccCCChhHHHHHHHHHHHHHHHHHhCCCEEEEEcCCCcH
Confidence 89999999999998876 22 11222111111111 10 00 000112455667889999998533100
Q ss_pred -hhHhhhc---CCCc-eEEEEeCCCHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHh------cC--CCCccEEEeCC--C
Q psy6613 215 -PSQLAKT---NLSP-CIVYLKISSPKVLQRLIKSRGKSQTRHLNVQMVAAEKLAQ------CP--QEMFDVILDEN--Q 279 (510)
Q Consensus 215 -~lq~lks---~l~P-ivIFIkPPS~e~L~~rLr~Rgt~~~e~i~kRL~aa~eLEq------~~--~~~FD~VIvND--d 279 (510)
..+.++. ...+ ++||+.. +.+++.+|+. ++ ...+- ...+++. .| +..-|++|.++ +
T Consensus 482 ~~R~~~r~l~~~~g~~~~V~Lda-~~ev~~~R~~-r~------l~~~~-~~~~i~~~~~~r~~~~~p~~~dl~IDts~~s 552 (573)
T 1m8p_A 482 ESRKFARDAVSQAGSFFLVHVAT-PLEHCEQSDK-RG------IYAAA-RRGEIKGFTGVDDPYETPEKADLVVDFSKQS 552 (573)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECC-CHHHHHHHCS-SC------HHHHH-HTTSSSSCBTTTBCCCCCSSCSEEECTTTSC
T ss_pred HHHHHHHHHHHhcCCeEEEEEeC-CHHHHHHHhc-cc------chhhh-hHHHHHHHHhccccccccCCCCEEEECCCCC
Confidence 0011121 1123 6777776 5677777742 11 00000 0011111 11 23458888665 5
Q ss_pred HHHHHHHHHHHHH
Q psy6613 280 LEDACEHIAEYLE 292 (510)
Q Consensus 280 Ld~A~~eL~~ile 292 (510)
++++++++.++|+
T Consensus 553 ~eevv~~Il~~l~ 565 (573)
T 1m8p_A 553 VRSIVHEIILVLE 565 (573)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8989988886664
No 369
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=84.91 E-value=0.4 Score=46.94 Aligned_cols=18 Identities=11% Similarity=0.128 Sum_probs=16.6
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|+||+|+|||||.+.|..
T Consensus 7 lvG~nGaGKSTLln~L~g 24 (270)
T 3sop_A 7 VVGQSGLGKSTLVNTLFK 24 (270)
T ss_dssp EEESSSSSHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHhC
Confidence 399999999999999887
No 370
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=84.76 E-value=0.43 Score=42.99 Aligned_cols=17 Identities=12% Similarity=-0.089 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|..
T Consensus 35 vG~~g~GKSTLl~~l~~ 51 (191)
T 1oix_A 35 IGDSGVGKSNLLSRFTR 51 (191)
T ss_dssp EECTTSSHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHhc
Confidence 99999999999999987
No 371
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=84.74 E-value=0.36 Score=43.87 Aligned_cols=37 Identities=19% Similarity=0.011 Sum_probs=25.3
Q ss_pred CCeE-EecCcCChHHHHHHHhc-CCCCceeeecCCCchh
Q psy6613 147 GMII-ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS 183 (510)
Q Consensus 147 ~RpI-~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p 183 (510)
.+++ +|++|||||||.++|+. ....+....+.||+..
T Consensus 30 ~~i~v~G~~~~GKSslin~l~~~~~~~~~~~~~~~t~~~ 68 (223)
T 4dhe_A 30 PEIAFAGRSNAGKSTAINVLCNQKRLAFASKTPGRTQHI 68 (223)
T ss_dssp CEEEEEESCHHHHHHHHHHHTTCSSSSCTTCCCCSCCCE
T ss_pred CEEEEEcCCCCCHHHHHHHHhCCCcceeecCCCCcccce
Confidence 3555 99999999999999997 3222333445566653
No 372
>2wji_A Ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GNP; 1.90A {Methanocaldococcus jannaschii} PDB: 2wjj_A* 2wjh_A*
Probab=84.64 E-value=0.43 Score=41.64 Aligned_cols=17 Identities=18% Similarity=0.042 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|..
T Consensus 9 vG~~gvGKStL~~~l~~ 25 (165)
T 2wji_A 9 IGNPNVGKSTIFNALTG 25 (165)
T ss_dssp ECSTTSSHHHHHHHHHC
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 99999999999999987
No 373
>2rcn_A Probable GTPase ENGC; YJEQ, circularly permuted, GTP-binding, hydrolase, nucleotide-binding; HET: GDP; 2.25A {Salmonella typhimurium} PDB: 2ykr_W 4a2i_V
Probab=84.60 E-value=0.57 Score=48.23 Aligned_cols=21 Identities=19% Similarity=0.131 Sum_probs=18.1
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
+.++ +||+|||||||.+.|+.
T Consensus 215 G~~~~lvG~sG~GKSTLln~L~g 237 (358)
T 2rcn_A 215 GRISIFAGQSGVGKSSLLNALLG 237 (358)
T ss_dssp TSEEEEECCTTSSHHHHHHHHHC
T ss_pred CCEEEEECCCCccHHHHHHHHhc
Confidence 4444 99999999999999987
No 374
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=84.60 E-value=0.56 Score=45.85 Aligned_cols=21 Identities=29% Similarity=0.213 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 37 Ge~~~liG~nGsGKSTLl~~l~G 59 (266)
T 4g1u_C 37 GEMVAIIGPNGAGKSTLLRLLTG 59 (266)
T ss_dssp TCEEEEECCTTSCHHHHHHHHTS
T ss_pred CCEEEEECCCCCcHHHHHHHHhc
Confidence 4454 99999999999998876
No 375
>3q85_A GTP-binding protein REM 2; G-domain, CAV2 beta, signaling protein; HET: GNP; 1.76A {Mus musculus} SCOP: c.37.1.8 PDB: 4aii_A*
Probab=84.57 E-value=0.47 Score=40.76 Aligned_cols=20 Identities=5% Similarity=0.024 Sum_probs=17.5
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|..
T Consensus 4 ki~ivG~~~~GKSsli~~l~~ 24 (169)
T 3q85_A 4 KVMLVGESGVGKSTLAGTFGG 24 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 344 99999999999999986
No 376
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=84.52 E-value=0.54 Score=45.78 Aligned_cols=21 Identities=24% Similarity=0.153 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 32 Ge~~~liG~nGsGKSTLlk~l~G 54 (262)
T 1b0u_A 32 GDVISIIGSSGSGKSTFLRCINF 54 (262)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhc
Confidence 4454 99999999999998876
No 377
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=84.33 E-value=0.51 Score=46.81 Aligned_cols=32 Identities=9% Similarity=0.086 Sum_probs=23.5
Q ss_pred EecCcCChHHHHHHHhc-CCCCceeeecCCCchh
Q psy6613 151 ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS 183 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p 183 (510)
+|.+|||||||.++|+. ... .....+.|||..
T Consensus 13 vG~~nvGKSTLln~l~g~~~~-ivs~~~~tTr~~ 45 (301)
T 1wf3_A 13 VGKPNVGKSTLLNNLLGVKVA-PISPRPQTTRKR 45 (301)
T ss_dssp ECSTTSSHHHHHHHHHTSCCS-CCCSSSCCCCSC
T ss_pred ECCCCCCHHHHHHHHhCCcee-eecCCCCceeEE
Confidence 99999999999999997 321 122356688854
No 378
>2fn4_A P23, RAS-related protein R-RAS; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, signaling protein; HET: GDP; 1.65A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ery_A*
Probab=84.14 E-value=0.58 Score=40.39 Aligned_cols=20 Identities=5% Similarity=0.029 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 11 ~i~v~G~~~~GKssli~~l~~ 31 (181)
T 2fn4_A 11 KLVVVGGGGVGKSALTIQFIQ 31 (181)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 444 99999999999999987
No 379
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=84.02 E-value=0.54 Score=44.36 Aligned_cols=17 Identities=0% Similarity=-0.056 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.+.|.+
T Consensus 33 ~G~~GsGKSTl~k~La~ 49 (246)
T 2bbw_A 33 LGPPGSGKGTVCQRIAQ 49 (246)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 99999999999999984
No 380
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=83.98 E-value=0.58 Score=45.25 Aligned_cols=21 Identities=14% Similarity=0.056 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 33 Ge~~~liG~nGsGKSTLlk~l~G 55 (257)
T 1g6h_A 33 GDVTLIIGPNGSGKSTLINVITG 55 (257)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 3444 99999999999998876
No 381
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=83.96 E-value=4.4 Score=36.18 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=28.1
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchhhhhhhcccHHHHHHHHHcC-CeEEEEeccCCchhHhhhc
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSSVLTEVQTEIERVYELASTL-QLVVLDCDTINHPSQLAKT 221 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~pFe~~I~TslesI~~vi~sG-Ki~ILDID~qg~~lq~lks 221 (510)
.+-.|+||||+.-.|.. .+.+.| +++++|.|++++....+..
T Consensus 8 s~kgG~GKTt~a~~la~-----------------------------~la~~g~~vlliD~D~~~~~~~~~~~ 50 (206)
T 4dzz_A 8 NPKGGSGKTTAVINIAT-----------------------------ALSRSGYNIAVVDTDPQMSLTNWSKA 50 (206)
T ss_dssp CSSTTSSHHHHHHHHHH-----------------------------HHHHTTCCEEEEECCTTCHHHHHHTT
T ss_pred eCCCCccHHHHHHHHHH-----------------------------HHHHCCCeEEEEECCCCCCHHHHHhc
Confidence 45678999998865542 112234 7999999999955554443
No 382
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=83.87 E-value=2.6 Score=40.60 Aligned_cols=19 Identities=0% Similarity=-0.022 Sum_probs=16.9
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+|||++.+.+..
T Consensus 42 ll~G~~GtGKT~la~~i~~ 60 (324)
T 1hqc_A 42 LLFGPPGLGKTTLAHVIAH 60 (324)
T ss_dssp EEECCTTCCCHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH
Confidence 4599999999999998876
No 383
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=83.83 E-value=0.54 Score=46.41 Aligned_cols=21 Identities=10% Similarity=0.235 Sum_probs=17.9
Q ss_pred CCeEEecCcCChHHHHHHHhc
Q psy6613 147 GMIIITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI~GPsGvGKsTL~~rLL~ 167 (510)
+-++.||+|+|||++.+.+.+
T Consensus 53 ~vLl~GppGtGKT~la~aia~ 73 (322)
T 3eie_A 53 GILLYGPPGTGKSYLAKAVAT 73 (322)
T ss_dssp EEEEECSSSSCHHHHHHHHHH
T ss_pred eEEEECCCCCcHHHHHHHHHH
Confidence 344599999999999998887
No 384
>2nzj_A GTP-binding protein REM 1; GDP/GTP binding, GTP hydrolysis, RAD and GEM like GTP protein 1, structural genomics; HET: GDP; 2.50A {Homo sapiens}
Probab=83.80 E-value=0.5 Score=40.70 Aligned_cols=20 Identities=0% Similarity=-0.026 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 6 ki~i~G~~~vGKSsl~~~l~~ 26 (175)
T 2nzj_A 6 RVVLLGDPGVGKTSLASLFAG 26 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCccHHHHHHHHhc
Confidence 344 99999999999999997
No 385
>2wjg_A FEOB, ferrous iron transport protein B homolog; membrane G-proteins, cell membrane, ION transport, transmembrane; HET: GDP; 2.20A {Methanocaldococcus jannaschii}
Probab=83.75 E-value=0.49 Score=41.57 Aligned_cols=32 Identities=9% Similarity=-0.166 Sum_probs=21.9
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchh
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS 183 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p 183 (510)
+|++|||||||.++|.... .+....+.+|...
T Consensus 13 vG~~gvGKStL~~~l~~~~-~~~~~~~~~t~~~ 44 (188)
T 2wjg_A 13 IGNPNVGKSTIFNALTGEN-VYIGNWPGVTVEK 44 (188)
T ss_dssp ECSTTSSHHHHHHHHHTTC-EEEEECTTSCCEE
T ss_pred ECCCCCCHHHHHHHHhCCC-ccccCCCCeeccc
Confidence 9999999999999998721 1223344455443
No 386
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=83.74 E-value=0.49 Score=40.33 Aligned_cols=20 Identities=5% Similarity=-0.003 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 7 ~i~v~G~~~~GKssl~~~l~~ 27 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSMIQRYCK 27 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 344 99999999999999987
No 387
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=83.66 E-value=0.68 Score=39.98 Aligned_cols=20 Identities=5% Similarity=0.049 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 10 ~i~v~G~~~~GKSsli~~l~~ 30 (182)
T 1ky3_A 10 KVIILGDSGVGKTSLMHRYVN 30 (182)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 344 99999999999999987
No 388
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=83.59 E-value=0.31 Score=43.90 Aligned_cols=17 Identities=29% Similarity=0.182 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 32 vG~~g~GKSTLl~~l~g 48 (210)
T 1pui_A 32 AGRSNAGKSSALNTLTN 48 (210)
T ss_dssp EECTTSSHHHHHTTTCC
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 99999999999998876
No 389
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=83.55 E-value=0.64 Score=44.21 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=17.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 34 Ge~~~i~G~nGsGKSTLl~~l~G 56 (229)
T 2pze_A 34 GQLLAVAGSTGAGKTSLLMMIMG 56 (229)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 4454 99999999999998876
No 390
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=83.51 E-value=0.55 Score=39.62 Aligned_cols=19 Identities=11% Similarity=0.097 Sum_probs=17.3
Q ss_pred eE-EecCcCChHHHHHHHhc
Q psy6613 149 II-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI-~GPsGvGKsTL~~rLL~ 167 (510)
++ +|++|||||||.++|+.
T Consensus 6 i~v~G~~~~GKssl~~~l~~ 25 (166)
T 2ce2_X 6 LVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHh
Confidence 44 99999999999999987
No 391
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=83.48 E-value=0.75 Score=48.62 Aligned_cols=66 Identities=9% Similarity=0.109 Sum_probs=37.0
Q ss_pred CCCCeEEecCcCChHHHHHHHhc-CCCCcee-eecCCCchhhhhhhcccHHHHHHHHHcCCeEEEEecc
Q psy6613 145 SPGMIIITRVTADISLAKRSLMS-NPSKRAI-MERSNSRSSVLTEVQTEIERVYELASTLQLVVLDCDT 211 (510)
Q Consensus 145 s~~RpI~GPsGvGKsTL~~rLL~-~P~~F~~-sVshTTR~pFe~~I~TslesI~~vi~sGKi~ILDID~ 211 (510)
.+|-++.||+|+|||++.+.|.. .--.|.. ..+.- -..+..+-..-+..++..++....||+=+|-
T Consensus 215 prGvLL~GPPGtGKTllAkAiA~e~~~~~~~v~~s~l-~sk~~Gese~~ir~~F~~A~~~~P~IifiDE 282 (437)
T 4b4t_L 215 PKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGI-VDKYIGESARIIREMFAYAKEHEPCIIFMDE 282 (437)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHHHHTCEEEEEEGGGT-CCSSSSHHHHHHHHHHHHHHHSCSEEEEEEC
T ss_pred CCeEEEECCCCCcHHHHHHHHHHHhCCCEEEEehhhh-ccccchHHHHHHHHHHHHHHhcCCceeeeec
Confidence 34455699999999999999887 2222322 22211 1111111112345566666777777776654
No 392
>4dsu_A GTPase KRAS, isoform 2B; small G-protein, signaling, hydrolase; HET: GDP; 1.70A {Homo sapiens} PDB: 4dsn_A* 4dst_A* 4dso_A*
Probab=83.41 E-value=0.64 Score=40.52 Aligned_cols=20 Identities=10% Similarity=0.075 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 6 ki~v~G~~~~GKSsli~~l~~ 26 (189)
T 4dsu_A 6 KLVVVGADGVGKSALTIQLIQ 26 (189)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 344 99999999999999997
No 393
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=83.34 E-value=0.65 Score=44.80 Aligned_cols=17 Identities=12% Similarity=0.114 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|..
T Consensus 41 ~G~nGsGKSTLl~~l~G 57 (247)
T 2ff7_A 41 VGRSGSGKSTLTKLIQR 57 (247)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999998876
No 394
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=83.30 E-value=0.53 Score=47.14 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=18.4
Q ss_pred CCCeE--EecCcCChHHHHHHHhc
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
.+.+| +||+|+|||||.+.|..
T Consensus 89 ~g~ivgI~G~sGsGKSTL~~~L~g 112 (312)
T 3aez_A 89 VPFIIGVAGSVAVGKSTTARVLQA 112 (312)
T ss_dssp CCEEEEEECCTTSCHHHHHHHHHH
T ss_pred CCEEEEEECCCCchHHHHHHHHHh
Confidence 34565 89999999999998776
No 395
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=83.27 E-value=0.5 Score=42.15 Aligned_cols=17 Identities=0% Similarity=-0.081 Sum_probs=15.6
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.+..
T Consensus 44 ~G~~G~GKTtL~~~i~~ 60 (180)
T 3ec2_A 44 VGSPGVGKTHLAVATLK 60 (180)
T ss_dssp CCSSSSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999998775
No 396
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=83.22 E-value=0.66 Score=44.40 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 32 Ge~~~l~G~nGsGKSTLl~~l~G 54 (240)
T 1ji0_A 32 GQIVTLIGANGAGKTTTLSAIAG 54 (240)
T ss_dssp TCEEEEECSTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 4444 99999999999998776
No 397
>1kao_A RAP2A; GTP-binding protein, small G protein, GDP, RAS; HET: GDP; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 2rap_A* 3rap_R*
Probab=83.22 E-value=0.54 Score=39.82 Aligned_cols=17 Identities=6% Similarity=-0.029 Sum_probs=16.3
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 9 ~G~~~~GKSsli~~l~~ 25 (167)
T 1kao_A 9 LGSGGVGKSALTVQFVT 25 (167)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHc
Confidence 99999999999999987
No 398
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=83.09 E-value=0.82 Score=45.06 Aligned_cols=21 Identities=10% Similarity=0.028 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 34 Ge~~~iiGpnGsGKSTLl~~l~G 56 (275)
T 3gfo_A 34 GEVTAILGGNGVGKSTLFQNFNG 56 (275)
T ss_dssp TSEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHc
Confidence 4444 99999999999998876
No 399
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=83.00 E-value=0.67 Score=45.33 Aligned_cols=21 Identities=24% Similarity=0.173 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 50 Gei~~liG~NGsGKSTLlk~l~G 72 (263)
T 2olj_A 50 GEVVVVIGPSGSGKSTFLRCLNL 72 (263)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CCEEEEEcCCCCcHHHHHHHHHc
Confidence 4454 99999999999998776
No 400
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=82.96 E-value=0.85 Score=45.34 Aligned_cols=17 Identities=12% Similarity=0.083 Sum_probs=16.3
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|+|||||.+.|+.
T Consensus 10 ~G~~GaGKTTll~~l~~ 26 (318)
T 1nij_A 10 TGFLGAGKTTLLRHILN 26 (318)
T ss_dssp EESSSSSCHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHh
Confidence 89999999999999997
No 401
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=82.93 E-value=0.59 Score=44.71 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=15.7
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 37 ~G~nGsGKSTLl~~l~G 53 (237)
T 2cbz_A 37 VGQVGCGKSSLLSALLA 53 (237)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999998776
No 402
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=82.85 E-value=1.3 Score=44.88 Aligned_cols=19 Identities=0% Similarity=0.144 Sum_probs=16.8
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+|||+|.+.+..
T Consensus 152 LL~GppGtGKT~la~aia~ 170 (389)
T 3vfd_A 152 LLFGPPGNGKTMLAKAVAA 170 (389)
T ss_dssp EEESSTTSCHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH
Confidence 3399999999999998877
No 403
>3lxw_A GTPase IMAP family member 1; immunity, structural genomics consortium, SGC, immune system; HET: GDP; 2.21A {Homo sapiens} PDB: 3v70_A*
Probab=82.79 E-value=0.64 Score=44.36 Aligned_cols=20 Identities=25% Similarity=0.336 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|.+|||||||.+.|+.
T Consensus 23 ~I~lvG~~g~GKSSlin~l~~ 43 (247)
T 3lxw_A 23 RLILVGRTGAGKSATGNSILG 43 (247)
T ss_dssp EEEEESSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHhC
Confidence 454 99999999999999997
No 404
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=82.76 E-value=0.77 Score=44.49 Aligned_cols=17 Identities=12% Similarity=-0.046 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|..
T Consensus 32 iG~NGsGKSTLlk~l~G 48 (249)
T 2qi9_C 32 VGPNGAGKSTLLARMAG 48 (249)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCcHHHHHHHHhC
Confidence 99999999999998877
No 405
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=82.54 E-value=0.59 Score=39.60 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|+|||||.++|+.
T Consensus 6 ~i~v~G~~~~GKssl~~~l~~ 26 (168)
T 1u8z_A 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 344 99999999999999987
No 406
>3t5g_A GTP-binding protein RHEB; immunoglobulin-like beta sandwitch, PDE delta, RHEB; HET: GDP FAR; 1.70A {Homo sapiens} SCOP: c.37.1.8 PDB: 1xtq_A* 1xtr_A* 1xts_A* 2l0x_A* 3sea_A*
Probab=82.51 E-value=0.76 Score=40.10 Aligned_cols=20 Identities=10% Similarity=0.001 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 8 ki~~~G~~~~GKSsli~~l~~ 28 (181)
T 3t5g_A 8 KIAILGYRSVGKSSLTIQFVE 28 (181)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 444 99999999999999996
No 407
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=82.51 E-value=0.69 Score=45.06 Aligned_cols=35 Identities=9% Similarity=0.018 Sum_probs=20.5
Q ss_pred CeE-EecCcCChHHHHHHHhc-CCCCceeeecCCCchh
Q psy6613 148 MII-ITRVTADISLAKRSLMS-NPSKRAIMERSNSRSS 183 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~-~P~~F~~sVshTTR~p 183 (510)
+++ +|.+|||||||.++|.. ... -...+++||+..
T Consensus 101 ~v~~vG~~~vGKSslin~l~~~~~~-~~~~~~g~T~~~ 137 (262)
T 3cnl_A 101 RVLIVGVPNTGKSTIINKLKGKRAS-SVGAQPGITKGI 137 (262)
T ss_dssp EEEEEESTTSSHHHHHHHHHTTCC-----------CCS
T ss_pred heEEeCCCCCCHHHHHHHHhccccc-ccCCCCCCccce
Confidence 454 99999999999999997 332 234567888764
No 408
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=82.46 E-value=0.65 Score=44.71 Aligned_cols=21 Identities=19% Similarity=0.102 Sum_probs=17.4
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 29 Ge~~~l~G~nGsGKSTLlk~l~G 51 (250)
T 2d2e_A 29 GEVHALMGPNGAGKSTLGKILAG 51 (250)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 4444 99999999999997775
No 409
>1g16_A RAS-related protein SEC4; G protein RAB, signaling protein, endocytosis/exocytosis complex; HET: GDP; 1.80A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1g17_A* 2ocy_C 2eqb_A
Probab=82.44 E-value=0.63 Score=39.72 Aligned_cols=20 Identities=15% Similarity=0.052 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 5 ~i~v~G~~~~GKssli~~l~~ 25 (170)
T 1g16_A 5 KILLIGDSGVGKSCLLVRFVE 25 (170)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 344 99999999999999997
No 410
>3llu_A RAS-related GTP-binding protein C; structural genomics consortium, SGC, cytoplasm, nucleotide-binding, nucleus, phosphoprotein; HET: GNP; 1.40A {Homo sapiens} PDB: 2q3f_A*
Probab=82.40 E-value=0.7 Score=41.47 Aligned_cols=20 Identities=10% Similarity=0.117 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||+|.++|..
T Consensus 22 ki~~vG~~~vGKTsLi~~l~~ 42 (196)
T 3llu_A 22 RILLMGLRRSGKSSIQKVVFH 42 (196)
T ss_dssp EEEEEESTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 455 99999999999998887
No 411
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=82.39 E-value=0.71 Score=43.78 Aligned_cols=18 Identities=0% Similarity=-0.095 Sum_probs=16.2
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|+||+|+|||||.+-|..
T Consensus 40 iiG~NGsGKSTLlk~l~G 57 (214)
T 1sgw_A 40 FHGPNGIGKTTLLKTIST 57 (214)
T ss_dssp EECCTTSSHHHHHHHHTT
T ss_pred EECCCCCCHHHHHHHHhc
Confidence 399999999999998876
No 412
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=82.36 E-value=0.77 Score=47.31 Aligned_cols=21 Identities=24% Similarity=0.248 Sum_probs=17.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 30 Ge~~~llGpsGsGKSTLLr~iaG 52 (359)
T 3fvq_A 30 GEILFIIGASGCGKTTLLRCLAG 52 (359)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCchHHHHHHHHhc
Confidence 4444 99999999999998876
No 413
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=82.30 E-value=0.74 Score=45.06 Aligned_cols=17 Identities=12% Similarity=-0.023 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 51 ~G~nGsGKSTLlk~l~G 67 (271)
T 2ixe_A 51 VGPNGSGKSTVAALLQN 67 (271)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999998876
No 414
>1ek0_A Protein (GTP-binding protein YPT51); vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase; HET: MHO GNP GDP; 1.48A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=82.29 E-value=0.61 Score=39.71 Aligned_cols=17 Identities=12% Similarity=0.040 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 9 ~G~~~~GKssli~~l~~ 25 (170)
T 1ek0_A 9 LGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999999987
No 415
>2gf0_A GTP-binding protein DI-RAS1; GDP/GTP binding, GTP hydrolysis, structural genomics, structural genomics consortium, SGC, transport protein; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=82.25 E-value=0.5 Score=41.82 Aligned_cols=20 Identities=5% Similarity=-0.064 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 10 ki~vvG~~~~GKSsli~~l~~ 30 (199)
T 2gf0_A 10 RVVVFGAGGVGKSSLVLRFVK 30 (199)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHc
Confidence 444 99999999999999987
No 416
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=82.21 E-value=0.61 Score=46.04 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=22.5
Q ss_pred EecCcCChHHHHHHHhcCCCCcee--eecCCCchh
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAI--MERSNSRSS 183 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~--sVshTTR~p 183 (510)
+|++|||||||.++|+.. ++.. ..+.|||..
T Consensus 14 vG~~nvGKSTLln~L~g~--~~~i~s~~~~tTr~~ 46 (301)
T 1ega_A 14 VGRPNVGKSTLLNKLLGQ--KISITSRKAQTTRHR 46 (301)
T ss_dssp ECSSSSSHHHHHHHHHTC--SEEECCCCSSCCSSC
T ss_pred ECCCCCCHHHHHHHHHCC--CccccCCCCCcceee
Confidence 999999999999999972 2221 235577743
No 417
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=82.19 E-value=0.76 Score=44.72 Aligned_cols=21 Identities=24% Similarity=0.211 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 41 Gei~~l~G~NGsGKSTLlk~l~G 63 (256)
T 1vpl_A 41 GEIFGLIGPNGAGKTTTLRIIST 63 (256)
T ss_dssp TCEEEEECCTTSSHHHHHHHHTT
T ss_pred CcEEEEECCCCCCHHHHHHHHhc
Confidence 4444 99999999999998876
No 418
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=82.15 E-value=1.8 Score=42.12 Aligned_cols=22 Identities=9% Similarity=0.253 Sum_probs=18.1
Q ss_pred CCCeEEecCcCChHHHHHHHhc
Q psy6613 146 PGMIIITRVTADISLAKRSLMS 167 (510)
Q Consensus 146 ~~RpI~GPsGvGKsTL~~rLL~ 167 (510)
.|-+++||+|+|||||.+.|..
T Consensus 45 ~GvlL~Gp~GtGKTtLakala~ 66 (274)
T 2x8a_A 45 AGVLLAGPPGCGKTLLAKAVAN 66 (274)
T ss_dssp SEEEEESSTTSCHHHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHHH
Confidence 3433499999999999998887
No 419
>1c1y_A RAS-related protein RAP-1A; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: c.37.1.8 PDB: 3kuc_A* 1gua_A* 3cf6_R* 3brw_D*
Probab=82.14 E-value=0.62 Score=39.64 Aligned_cols=17 Identities=6% Similarity=-0.054 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 9 ~G~~~~GKssli~~l~~ 25 (167)
T 1c1y_A 9 LGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHc
Confidence 99999999999999987
No 420
>2cxx_A Probable GTP-binding protein ENGB; structural genomics, NPPSFA, national P protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: c.37.1.8
Probab=82.00 E-value=0.69 Score=40.46 Aligned_cols=20 Identities=25% Similarity=0.122 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 3 ki~v~G~~~~GKSsli~~l~~ 23 (190)
T 2cxx_A 3 TIIFAGRSNVGKSTLIYRLTG 23 (190)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 344 99999999999999997
No 421
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=81.91 E-value=0.69 Score=44.52 Aligned_cols=17 Identities=12% Similarity=0.012 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 30 iG~nGsGKSTLl~~l~G 46 (240)
T 2onk_A 30 LGPTGAGKSVFLELIAG 46 (240)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 99999999999998876
No 422
>3tw8_B RAS-related protein RAB-35; longin domain, RAB GTPase, guanine exchange factor; 2.10A {Homo sapiens}
Probab=81.87 E-value=0.61 Score=40.27 Aligned_cols=20 Identities=10% Similarity=-0.014 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 11 ~i~v~G~~~~GKssl~~~l~~ 31 (181)
T 3tw8_B 11 KLLIIGDSGVGKSSLLLRFAD 31 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 444 99999999999999987
No 423
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=81.86 E-value=0.56 Score=43.35 Aligned_cols=34 Identities=9% Similarity=-0.110 Sum_probs=20.9
Q ss_pred CeE-EecCcCChHHHHHHHhcCCCCce-eeecCCCchh
Q psy6613 148 MII-ITRVTADISLAKRSLMSNPSKRA-IMERSNSRSS 183 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~~P~~F~-~sVshTTR~p 183 (510)
+++ +|++|||||||.++|+.. .|. ...+.||+..
T Consensus 31 kI~vvG~~~vGKSsLin~l~~~--~~~~~~~~~~t~~~ 66 (228)
T 2qu8_A 31 TIILSGAPNVGKSSFMNIVSRA--NVDVQSYSFTTKNL 66 (228)
T ss_dssp EEEEECSTTSSHHHHHHHHTTT--CEEEECC-----CE
T ss_pred EEEEECCCCCCHHHHHHHHhCC--CCccCCCCCcceee
Confidence 455 999999999999999872 232 2345566644
No 424
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=81.85 E-value=0.75 Score=45.48 Aligned_cols=22 Identities=27% Similarity=0.191 Sum_probs=18.5
Q ss_pred CCCeE--EecCcCChHHHHHHHhc
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
.+.+| +||+|+|||||.+.|..
T Consensus 79 ~g~iigI~G~~GsGKSTl~~~L~~ 102 (308)
T 1sq5_A 79 IPYIISIAGSVAVGKSTTARVLQA 102 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Confidence 34565 89999999999998876
No 425
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=81.79 E-value=0.69 Score=44.95 Aligned_cols=17 Identities=12% Similarity=0.090 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 52 ~G~nGsGKSTLl~~l~G 68 (260)
T 2ghi_A 52 VGHTGSGKSTIAKLLYR 68 (260)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999998876
No 426
>1z08_A RAS-related protein RAB-21; RAB GTPase, vesicular trafficking, protein transport; HET: GNP; 1.80A {Homo sapiens} SCOP: c.37.1.8 PDB: 2ot3_B 1yzu_A* 1z0i_A 1yzt_A*
Probab=81.76 E-value=0.67 Score=39.69 Aligned_cols=17 Identities=0% Similarity=-0.197 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 12 ~G~~~~GKssli~~l~~ 28 (170)
T 1z08_A 12 LGEGCVGKTSLVLRYCE 28 (170)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHc
Confidence 99999999999999997
No 427
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=81.73 E-value=0.82 Score=44.28 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 31 Ge~~~l~G~nGsGKSTLl~~l~G 53 (253)
T 2nq2_C 31 GDILAVLGQNGCGKSTLLDLLLG 53 (253)
T ss_dssp TCEEEEECCSSSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 3444 99999999999998876
No 428
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=81.70 E-value=1.7 Score=45.33 Aligned_cols=62 Identities=13% Similarity=0.145 Sum_probs=33.5
Q ss_pred eEEecCcCChHHHHHHHhc-CCCCceeeecCCC-chhhhhhhcccHHHHHHHHHcCCeEEEEec
Q psy6613 149 IIITRVTADISLAKRSLMS-NPSKRAIMERSNS-RSSVLTEVQTEIERVYELASTLQLVVLDCD 210 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~-~P~~F~~sVshTT-R~pFe~~I~TslesI~~vi~sGKi~ILDID 210 (510)
+|.||+|+|||+|.+.|.. ....-.+.+++.. -..+.......+..+...+.....|||=+|
T Consensus 171 LL~GppGtGKT~lA~aia~~~~~~~~~~v~~~~l~~~~~g~~~~~~~~~f~~a~~~~~~vl~iD 234 (444)
T 2zan_A 171 LLFGPPGTGKSYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFID 234 (444)
T ss_dssp EEECSTTSSHHHHHHHHHHHCCSSEEEEECCC---------CCCTHHHHHHHHHHSCSEEEEES
T ss_pred EEECCCCCCHHHHHHHHHHHcCCCCEEEEeHHHHHhhhcchHHHHHHHHHHHHHHcCCeEEEEe
Confidence 3499999999999998887 4222222333321 011111112345566666666666666565
No 429
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=81.67 E-value=0.72 Score=44.97 Aligned_cols=17 Identities=12% Similarity=0.016 Sum_probs=15.7
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|..
T Consensus 52 ~G~NGsGKSTLlk~l~G 68 (267)
T 2zu0_C 52 MGPNGSGKSTLSATLAG 68 (267)
T ss_dssp ECCTTSSHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHhC
Confidence 99999999999998775
No 430
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=81.65 E-value=0.66 Score=40.57 Aligned_cols=20 Identities=10% Similarity=0.011 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 9 ki~v~G~~~~GKSsli~~l~~ 29 (208)
T 3clv_A 9 KTVLLGESSVGKSSIVLRLTK 29 (208)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 444 99999999999999997
No 431
>1puj_A YLQF, conserved hypothetical protein YLQF; structural genomics, nysgxrc T18, GTPase, PSI, protein structure initiative; HET: GNP; 2.00A {Bacillus subtilis} SCOP: c.37.1.8
Probab=81.64 E-value=0.77 Score=45.21 Aligned_cols=33 Identities=12% Similarity=-0.071 Sum_probs=17.4
Q ss_pred EecCcCChHHHHHHHhcCCCCceeeecCCCchh
Q psy6613 151 ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS 183 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p 183 (510)
+|.+|||||||.+.|+..........|.|||..
T Consensus 126 vG~~nvGKSsliN~l~~~~~~~~~~~~g~T~~~ 158 (282)
T 1puj_A 126 IGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQ 158 (282)
T ss_dssp EESTTSSHHHHHHHHHTSCCC------------
T ss_pred EecCCCchHHHHHHHhcCceeecCCCCCeeeee
Confidence 999999999999999972212334467788865
No 432
>1wms_A RAB-9, RAB9, RAS-related protein RAB-9A; GTPase, protein transport; HET: GDP; 1.25A {Homo sapiens} SCOP: c.37.1.8 PDB: 1s8f_A* 1yzl_A* 2ocb_A*
Probab=81.62 E-value=0.66 Score=40.10 Aligned_cols=17 Identities=6% Similarity=-0.080 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 13 ~G~~~~GKSsli~~l~~ 29 (177)
T 1wms_A 13 LGDGGVGKSSLMNRYVT 29 (177)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHc
Confidence 99999999999999997
No 433
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=81.59 E-value=0.76 Score=44.01 Aligned_cols=17 Identities=12% Similarity=-0.195 Sum_probs=15.7
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 34 ~G~nGsGKSTLl~~l~G 50 (243)
T 1mv5_A 34 AGPSGGGKSTIFSLLER 50 (243)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCCHHHHHHHHhc
Confidence 99999999999998776
No 434
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=81.57 E-value=0.63 Score=46.01 Aligned_cols=37 Identities=11% Similarity=0.127 Sum_probs=25.7
Q ss_pred CCeE-EecCcCChHHHHHHHhcCCCCceeeecCCCchh
Q psy6613 147 GMII-ITRVTADISLAKRSLMSNPSKRAIMERSNSRSS 183 (510)
Q Consensus 147 ~RpI-~GPsGvGKsTL~~rLL~~P~~F~~sVshTTR~p 183 (510)
|.+. +|++|||||||.++|+...-......+.|||..
T Consensus 11 g~v~ivG~~nvGKSTLin~l~g~~~~i~s~~~~tT~~~ 48 (308)
T 3iev_A 11 GYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMR 48 (308)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTSCCSCCCSSSCCCCSC
T ss_pred CEEEEECCCCCcHHHHHHHHhCCCccccCCCCCceeeE
Confidence 3444 999999999999999972111223456677765
No 435
>2y8e_A RAB-protein 6, GH09086P, RAB6; hydrolase, nucleotide binding, GTP binding; HET: GNP; 1.39A {Drosophila melanogaster} PDB: 3cwz_A* 1yzq_A* 2gil_A* 2e9s_A* 2fe4_A* 2ffq_A* 1d5c_A*
Probab=81.57 E-value=0.71 Score=39.78 Aligned_cols=20 Identities=5% Similarity=0.082 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 16 ~i~v~G~~~~GKssli~~l~~ 36 (179)
T 2y8e_A 16 KLVFLGEQSVGKTSLITRFMY 36 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 444 99999999999999986
No 436
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=81.46 E-value=0.71 Score=42.82 Aligned_cols=17 Identities=0% Similarity=-0.236 Sum_probs=15.8
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.+.|..
T Consensus 7 ~G~nG~GKTTll~~l~g 23 (189)
T 2i3b_A 7 TGPPGVGKTTLIHKASE 23 (189)
T ss_dssp ESCCSSCHHHHHHHHHH
T ss_pred ECCCCChHHHHHHHHHh
Confidence 99999999999998876
No 437
>1z0j_A RAB-22, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Mus musculus} SCOP: c.37.1.8 PDB: 1yvd_A*
Probab=81.45 E-value=0.68 Score=39.51 Aligned_cols=17 Identities=6% Similarity=-0.031 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 12 ~G~~~~GKSsli~~l~~ 28 (170)
T 1z0j_A 12 LGDTGVGKSSIMWRFVE 28 (170)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECcCCCCHHHHHHHHHc
Confidence 99999999999999997
No 438
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=81.44 E-value=0.83 Score=45.01 Aligned_cols=17 Identities=12% Similarity=-0.166 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 53 iG~NGsGKSTLlk~l~G 69 (279)
T 2ihy_A 53 YGLNGAGKTTLLNILNA 69 (279)
T ss_dssp ECCTTSSHHHHHHHHTT
T ss_pred ECCCCCcHHHHHHHHhC
Confidence 99999999999998876
No 439
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=81.38 E-value=0.7 Score=39.94 Aligned_cols=18 Identities=11% Similarity=0.065 Sum_probs=16.1
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|.||+|+|||++.+.+..
T Consensus 48 l~G~~G~GKT~l~~~~~~ 65 (195)
T 1jbk_A 48 LIGEPGVGKTAIVEGLAQ 65 (195)
T ss_dssp EECCTTSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 399999999999998876
No 440
>1r8s_A ADP-ribosylation factor 1; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Bos taurus} SCOP: c.37.1.8 PDB: 1re0_A* 1s9d_A* 1u81_A* 1r8q_A* 1rrf_A* 1rrg_A* 1hur_A* 1o3y_A* 1j2j_A* 2j59_A* 1mr3_F* 2k5u_A* 3lrp_A* 3tjz_A* 3rd1_A* 2ksq_A* 2a5d_A* 2a5f_A* 2j5x_A* 1e0s_A* ...
Probab=81.35 E-value=0.69 Score=39.45 Aligned_cols=17 Identities=12% Similarity=-0.115 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||+|.++|+.
T Consensus 6 ~G~~~~GKssl~~~l~~ 22 (164)
T 1r8s_A 6 VGLDAAGKTTILYKLKL 22 (164)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHc
Confidence 99999999999999987
No 441
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=81.34 E-value=0.7 Score=42.47 Aligned_cols=17 Identities=6% Similarity=0.028 Sum_probs=16.3
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.++|+.
T Consensus 12 ~G~sGsGKTTl~~~l~~ 28 (174)
T 1np6_A 12 AAWSGTGKTTLLKKLIP 28 (174)
T ss_dssp ECCTTSCHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHH
Confidence 89999999999999987
No 442
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=81.29 E-value=0.69 Score=46.67 Aligned_cols=24 Identities=13% Similarity=0.337 Sum_probs=19.2
Q ss_pred CCCCCeEEecCcCChHHHHHHHhc
Q psy6613 144 PSPGMIIITRVTADISLAKRSLMS 167 (510)
Q Consensus 144 Ps~~RpI~GPsGvGKsTL~~rLL~ 167 (510)
|..+-+|.||+|+|||+|.+.|..
T Consensus 83 ~~~~iLL~GppGtGKT~la~ala~ 106 (355)
T 2qp9_X 83 PTSGILLYGPPGTGKSYLAKAVAT 106 (355)
T ss_dssp CCCCEEEECSTTSCHHHHHHHHHH
T ss_pred CCceEEEECCCCCcHHHHHHHHHH
Confidence 333445599999999999998887
No 443
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=81.29 E-value=1.1 Score=39.69 Aligned_cols=20 Identities=5% Similarity=-0.041 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 25 ki~v~G~~~~GKSsli~~l~~ 45 (191)
T 3dz8_A 25 KLLIIGNSSVGKTSFLFRYAD 45 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 444 99999999999999997
No 444
>1m7b_A RND3/RHOE small GTP-binding protein; small GTPase, signaling protein; HET: GTP; 2.00A {Homo sapiens} SCOP: c.37.1.8 PDB: 2v55_B*
Probab=81.27 E-value=0.81 Score=40.42 Aligned_cols=20 Identities=5% Similarity=0.051 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 9 ki~v~G~~~vGKSsli~~l~~ 29 (184)
T 1m7b_A 9 KIVVVGDSQCGKTALLHVFAK 29 (184)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 344 99999999999999997
No 445
>1u0l_A Probable GTPase ENGC; permutation, OB-fold, zinc-finger, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; HET: GDP; 2.80A {Thermotoga maritima} SCOP: b.40.4.5 c.37.1.8
Probab=81.25 E-value=0.9 Score=44.83 Aligned_cols=17 Identities=6% Similarity=-0.171 Sum_probs=16.2
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||||+|||||.+.|..
T Consensus 175 ~G~sG~GKSTll~~l~g 191 (301)
T 1u0l_A 175 AGLSGVGKSSLLNAINP 191 (301)
T ss_dssp ECSTTSSHHHHHHHHST
T ss_pred ECCCCCcHHHHHHHhcc
Confidence 99999999999999886
No 446
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=81.23 E-value=1 Score=44.01 Aligned_cols=19 Identities=5% Similarity=0.132 Sum_probs=17.0
Q ss_pred eEEecCcCChHHHHHHHhc
Q psy6613 149 IIITRVTADISLAKRSLMS 167 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~ 167 (510)
+|.||+|+|||++.+.|..
T Consensus 53 LL~Gp~GtGKT~la~ala~ 71 (301)
T 3cf0_A 53 LFYGPPGCGKTLLAKAIAN 71 (301)
T ss_dssp EEECSSSSSHHHHHHHHHH
T ss_pred EEECCCCcCHHHHHHHHHH
Confidence 4499999999999998887
No 447
>3bc1_A RAS-related protein RAB-27A; RAB27, GTPase, RAB, signaling protein, GDPNP, SLP2A, exophil GTP-binding, lipoprotein, membrane, methylation; HET: GNP; 1.80A {Mus musculus} PDB: 2iey_A* 2if0_A* 2zet_A*
Probab=80.98 E-value=0.71 Score=40.23 Aligned_cols=20 Identities=0% Similarity=-0.072 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 13 ki~v~G~~~~GKSsli~~l~~ 33 (195)
T 3bc1_A 13 KFLALGDSGVGKTSVLYQYTD 33 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 444 99999999999999996
No 448
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=80.92 E-value=1.2 Score=45.24 Aligned_cols=17 Identities=12% Similarity=0.128 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.+.|+.
T Consensus 181 vG~sGsGKSTll~~l~~ 197 (361)
T 2gza_A 181 AGETGSGKTTLMKALMQ 197 (361)
T ss_dssp EESSSSCHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHh
Confidence 99999999999999988
No 449
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=80.88 E-value=0.83 Score=45.62 Aligned_cols=22 Identities=9% Similarity=0.060 Sum_probs=18.4
Q ss_pred CCCeE--EecCcCChHHHHHHHhc
Q psy6613 146 PGMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 146 ~~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
.+.++ +||+|+||||+.+.|..
T Consensus 101 ~g~vi~lvG~nGsGKTTll~~Lag 124 (304)
T 1rj9_A 101 KGRVVLVVGVNGVGKTTTIAKLGR 124 (304)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHH
T ss_pred CCeEEEEECCCCCcHHHHHHHHHH
Confidence 34565 99999999999998875
No 450
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=80.88 E-value=0.9 Score=44.22 Aligned_cols=17 Identities=6% Similarity=-0.091 Sum_probs=15.8
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 39 iG~nGsGKSTLl~~i~G 55 (266)
T 2yz2_A 39 AGNTGSGKSTLLQIVAG 55 (266)
T ss_dssp ECSTTSSHHHHHHHHTT
T ss_pred ECCCCCcHHHHHHHHhC
Confidence 99999999999998776
No 451
>1r2q_A RAS-related protein RAB-5A; GTPase, GNP, atomic resolution, protein transport; HET: GNP; 1.05A {Homo sapiens} SCOP: c.37.1.8 PDB: 1n6h_A* 1tu4_A* 1tu3_A* 1n6k_A* 1n6i_A* 1n6l_A* 1n6o_A* 1n6p_A* 1n6n_A* 1n6r_A* 3mjh_A* 1z0d_A* 1huq_A* 2hei_A* 1z07_A*
Probab=80.84 E-value=0.74 Score=39.18 Aligned_cols=17 Identities=6% Similarity=-0.031 Sum_probs=16.3
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 12 ~G~~~~GKssli~~l~~ 28 (170)
T 1r2q_A 12 LGESAVGKSSLVLRFVK 28 (170)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHc
Confidence 99999999999999996
No 452
>2xtp_A GTPase IMAP family member 2; immune system, G protein; HET: MSE; 1.50A {Homo sapiens} PDB: 2xto_A* 2xtm_A* 2xtn_A* 3p1j_A
Probab=80.81 E-value=0.98 Score=42.65 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=18.0
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 24 ~I~lvG~~g~GKStl~n~l~~ 44 (260)
T 2xtp_A 24 RIILVGKTGTGKSAAGNSILR 44 (260)
T ss_dssp EEEEEECTTSCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 455 99999999999999997
No 453
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.79 E-value=0.8 Score=48.36 Aligned_cols=22 Identities=14% Similarity=0.187 Sum_probs=18.2
Q ss_pred CCCeEEecCcCChHHHHHHHhc
Q psy6613 146 PGMIIITRVTADISLAKRSLMS 167 (510)
Q Consensus 146 ~~RpI~GPsGvGKsTL~~rLL~ 167 (510)
+|-++.||+|+|||++.+.+..
T Consensus 216 rGvLLyGPPGTGKTllAkAiA~ 237 (434)
T 4b4t_M 216 KGALMYGPPGTGKTLLARACAA 237 (434)
T ss_dssp CEEEEESCTTSSHHHHHHHHHH
T ss_pred CeeEEECcCCCCHHHHHHHHHH
Confidence 3344599999999999998887
No 454
>3ihw_A Centg3; RAS, centaurin, GTPase, structural genomics, structural genomics consortium, SGC, alternative splicing, ANK repeat, cytoplasm, GTP-binding; 1.92A {Homo sapiens} SCOP: c.37.1.0
Probab=80.46 E-value=0.76 Score=41.05 Aligned_cols=20 Identities=5% Similarity=0.081 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 22 ki~ivG~~~vGKSsL~~~~~~ 42 (184)
T 3ihw_A 22 KVGIVGNLSSGKSALVHRYLT 42 (184)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 344 99999999999999987
No 455
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=80.42 E-value=0.68 Score=43.61 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhhcCCcEEEEEEecchhhHHhhc
Q psy6613 434 MQKALFDFLKHRFEGRIIITRVTADISLAKRSL 466 (510)
Q Consensus 434 m~~al~~~l~~~f~~~i~~~~~~~d~~~~~~~~ 466 (510)
.+..++++|++--+|..+| ||-|+..+.+..
T Consensus 135 ~~~~l~~~l~~l~~g~tii--vtHd~~~~~~~~ 165 (208)
T 3b85_A 135 TPAQMKMFLTRLGFGSKMV--VTGDITQVDLPG 165 (208)
T ss_dssp CHHHHHHHHTTBCTTCEEE--EEEC--------
T ss_pred cHHHHHHHHHHhcCCCEEE--EECCHHHHhCcC
Confidence 5666777776642355544 888988888754
No 456
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=80.39 E-value=0.76 Score=44.74 Aligned_cols=17 Identities=12% Similarity=0.046 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.+.|+.
T Consensus 31 ~Gp~GsGKSTll~~l~g 47 (261)
T 2eyu_A 31 TGPTGSGKSTTIASMID 47 (261)
T ss_dssp ECSTTCSHHHHHHHHHH
T ss_pred ECCCCccHHHHHHHHHH
Confidence 99999999999998876
No 457
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=80.37 E-value=0.67 Score=40.39 Aligned_cols=20 Identities=15% Similarity=-0.039 Sum_probs=17.5
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 20 ~i~v~G~~~~GKssli~~l~~ 40 (183)
T 1moz_A 20 RILILGLDGAGKTTILYRLQI 40 (183)
T ss_dssp EEEEEEETTSSHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 444 99999999999999986
No 458
>2lkc_A Translation initiation factor IF-2; NMR {Geobacillus stearothermophilus} PDB: 2lkd_A*
Probab=80.35 E-value=0.96 Score=39.08 Aligned_cols=20 Identities=5% Similarity=0.091 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 10 ~i~v~G~~~~GKssl~~~l~~ 30 (178)
T 2lkc_A 10 VVTIMGHVDHGKTTLLDAIRH 30 (178)
T ss_dssp EEEEESCTTTTHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 455 99999999999999987
No 459
>2cjw_A GTP-binding protein GEM; nucleotide-binding, small GTPase, conformational change, cysteine-modified, G-protein hydrolase; HET: GDP; 2.10A {Homo sapiens} PDB: 2cjw_B* 2ht6_A*
Probab=80.34 E-value=0.69 Score=41.73 Aligned_cols=20 Identities=10% Similarity=0.049 Sum_probs=17.5
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||+|.++|+.
T Consensus 8 kv~lvG~~~vGKSsL~~~~~~ 28 (192)
T 2cjw_A 8 RVVLIGEQGVGKSTLANIFAG 28 (192)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 344 99999999999999985
No 460
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=80.32 E-value=0.81 Score=45.34 Aligned_cols=17 Identities=6% Similarity=-0.019 Sum_probs=15.8
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|..
T Consensus 37 ~G~sGsGKSTla~~L~~ 53 (290)
T 1odf_A 37 SGPQGSGKSFTSIQIYN 53 (290)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999998876
No 461
>1f6b_A SAR1; gtpases, N-terminal helix, Mg-containing complex, protein transport; HET: GDP; 1.70A {Cricetulus griseus} SCOP: c.37.1.8 PDB: 2fmx_A* 2fa9_A* 2gao_A*
Probab=80.29 E-value=0.86 Score=41.21 Aligned_cols=20 Identities=10% Similarity=0.022 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|..
T Consensus 27 ki~lvG~~~vGKSsLi~~l~~ 47 (198)
T 1f6b_A 27 KLVFLGLDNAGKTTLLHMLKD 47 (198)
T ss_dssp EEEEEEETTSSHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 455 99999999999999987
No 462
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=80.29 E-value=0.95 Score=46.78 Aligned_cols=21 Identities=29% Similarity=0.151 Sum_probs=17.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 54 Gei~~IiGpnGaGKSTLlr~i~G 76 (366)
T 3tui_C 54 GQIYGVIGASGAGKSTLIRCVNL 76 (366)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCEEEEEcCCCchHHHHHHHHhc
Confidence 4555 99999999999988776
No 463
>2hxs_A RAB-26, RAS-related protein RAB-28; GTPase, signaling protein; HET: G3D; 1.10A {Homo sapiens} PDB: 2hy4_A* 3e5h_A*
Probab=80.28 E-value=0.81 Score=39.58 Aligned_cols=17 Identities=0% Similarity=-0.046 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||+|.++|+.
T Consensus 12 ~G~~~~GKssl~~~l~~ 28 (178)
T 2hxs_A 12 LGDGASGKTSLTTCFAQ 28 (178)
T ss_dssp ECCTTSSHHHHHHHHHG
T ss_pred ECcCCCCHHHHHHHHHh
Confidence 99999999999999987
No 464
>3c5c_A RAS-like protein 12; GDP, GTPase, structural genomics consortium, SGC, limited proteolysis, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.85A {Homo sapiens}
Probab=80.23 E-value=0.94 Score=40.37 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||+|.++|+.
T Consensus 23 ki~vvG~~~vGKTsLi~~l~~ 43 (187)
T 3c5c_A 23 NLAILGRRGAGKSALTVKFLT 43 (187)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHh
Confidence 444 99999999999999997
No 465
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=79.94 E-value=0.91 Score=45.67 Aligned_cols=17 Identities=24% Similarity=0.180 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+.|+.
T Consensus 132 vGpsGsGKSTLl~lL~g 148 (305)
T 2v9p_A 132 IGPPNTGKSMLCNSLIH 148 (305)
T ss_dssp ECSSSSSHHHHHHHHHH
T ss_pred ECCCCCcHHHHHHHHhh
Confidence 99999999999998876
No 466
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=79.91 E-value=0.71 Score=41.86 Aligned_cols=20 Identities=15% Similarity=0.013 Sum_probs=18.0
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|+|||||.++|+.
T Consensus 14 ~i~~~G~~g~GKTsl~~~l~~ 34 (218)
T 1nrj_B 14 SIIIAGPQNSGKTSLLTLLTT 34 (218)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 455 99999999999999997
No 467
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=79.89 E-value=1 Score=46.34 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 29 Ge~~~llGpnGsGKSTLLr~iaG 51 (359)
T 2yyz_A 29 GEFVALLGPSGCGKTTTLLMLAG 51 (359)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEEcCCCchHHHHHHHHHC
Confidence 4444 99999999999998876
No 468
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=79.88 E-value=0.83 Score=45.19 Aligned_cols=18 Identities=17% Similarity=0.073 Sum_probs=16.2
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|+||+|||||||.+.|..
T Consensus 23 lvG~nG~GKSTLl~~L~g 40 (301)
T 2qnr_A 23 VVGESGLGKSTLINSLFL 40 (301)
T ss_dssp EEEETTSSHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHhC
Confidence 499999999999999874
No 469
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=79.85 E-value=1.4 Score=43.02 Aligned_cols=18 Identities=11% Similarity=-0.034 Sum_probs=16.1
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|.||+|+|||||.+.+..
T Consensus 42 l~G~~GtGKT~la~~i~~ 59 (324)
T 1l8q_A 42 IYGSVGTGKTHLLQAAGN 59 (324)
T ss_dssp EECSSSSSHHHHHHHHHH
T ss_pred EECCCCCcHHHHHHHHHH
Confidence 389999999999998876
No 470
>1upt_A ARL1, ADP-ribosylation factor-like protein 1; hydrolase/protein-binding, complex (GTPase/golgin), golgin-245, GRIP, golgin, GTPase, G-protein; HET: GTP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1r4a_A*
Probab=79.83 E-value=0.83 Score=39.11 Aligned_cols=20 Identities=15% Similarity=-0.026 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 9 ~i~v~G~~~~GKssl~~~l~~ 29 (171)
T 1upt_A 9 RILILGLDGAGKTTILYRLQV 29 (171)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 444 99999999999999987
No 471
>2a9k_A RAS-related protein RAL-A; bacterial ADP-ribosyltransferase, RAL, RHO, GD binding; HET: GDP NAD; 1.73A {Homo sapiens} SCOP: c.37.1.8 PDB: 2a78_A*
Probab=79.77 E-value=0.83 Score=39.62 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 20 ki~v~G~~~~GKSsli~~l~~ 40 (187)
T 2a9k_A 20 KVIMVGSGGVGKSALTLQFMY 40 (187)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 444 99999999999999997
No 472
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=79.75 E-value=1 Score=46.25 Aligned_cols=21 Identities=10% Similarity=0.167 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 41 Ge~~~llGpnGsGKSTLLr~iaG 63 (355)
T 1z47_A 41 GEMVGLLGPSGSGKTTILRLIAG 63 (355)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCCcHHHHHHHHhC
Confidence 4444 99999999999998876
No 473
>2bme_A RAB4A, RAS-related protein RAB4A; GTP-binding protein, vesicular transport, endocytosis, prenylation, protein transport, transport; HET: GNP; 1.57A {Homo sapiens} SCOP: c.37.1.8 PDB: 2bmd_A* 1yu9_A* 1z0k_A*
Probab=79.71 E-value=0.88 Score=39.74 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 12 ki~v~G~~~~GKSsli~~l~~ 32 (186)
T 2bme_A 12 KFLVIGNAGTGKSCLLHQFIE 32 (186)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 444 99999999999999987
No 474
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=79.68 E-value=1 Score=46.31 Aligned_cols=21 Identities=10% Similarity=0.093 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 29 Ge~~~llGpnGsGKSTLLr~iaG 51 (362)
T 2it1_A 29 GEFMALLGPSGSGKSTLLYTIAG 51 (362)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCchHHHHHHHHhc
Confidence 4444 99999999999998876
No 475
>1fzq_A ADP-ribosylation factor-like protein 3; protein-GDP complex without magnesium, ARF family, RAS superfamily, G-domain, signaling protein; HET: MES GDP; 1.70A {Mus musculus} SCOP: c.37.1.8 PDB: 3bh7_A* 3bh6_A*
Probab=79.62 E-value=0.82 Score=40.56 Aligned_cols=20 Identities=20% Similarity=0.134 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|..
T Consensus 18 ki~ivG~~~vGKSsL~~~l~~ 38 (181)
T 1fzq_A 18 RILLLGLDNAGKTTLLKQLAS 38 (181)
T ss_dssp EEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 454 99999999999999987
No 476
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=79.61 E-value=1 Score=46.75 Aligned_cols=21 Identities=14% Similarity=0.155 Sum_probs=17.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 29 Ge~~~llGpsGsGKSTLLr~iaG 51 (381)
T 3rlf_A 29 GEFVVFVGPSGCGKSTLLRMIAG 51 (381)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCEEEEEcCCCchHHHHHHHHHc
Confidence 4444 99999999999998877
No 477
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=79.50 E-value=1 Score=46.34 Aligned_cols=21 Identities=10% Similarity=0.158 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 29 Ge~~~llGpnGsGKSTLLr~iaG 51 (372)
T 1g29_1 29 GEFMILLGPSGCGKTTTLRMIAG 51 (372)
T ss_dssp TCEEEEECSTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCcHHHHHHHHHHc
Confidence 3444 99999999999998876
No 478
>2iwr_A Centaurin gamma 1; ANK repeat, zinc-finger, GTP-binding, polymorphism, nucleotide-binding, alternative splicing, protein transport; HET: CAF; 1.5A {Homo sapiens} PDB: 2bmj_A
Probab=79.42 E-value=0.79 Score=39.85 Aligned_cols=20 Identities=5% Similarity=0.011 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||+|.++|+.
T Consensus 9 ki~~vG~~~vGKTsli~~l~~ 29 (178)
T 2iwr_A 9 RLGVLGDARSGKSSLIHRFLT 29 (178)
T ss_dssp EEEEECCGGGCHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 344 99999999999999997
No 479
>1z0f_A RAB14, member RAS oncogene family; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 2.15A {Homo sapiens} SCOP: c.37.1.8 PDB: 2aed_A* 4drz_A*
Probab=79.39 E-value=0.87 Score=39.18 Aligned_cols=20 Identities=15% Similarity=0.051 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 17 ~i~v~G~~~~GKSsli~~l~~ 37 (179)
T 1z0f_A 17 KYIIIGDMGVGKSCLLHQFTE 37 (179)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 444 99999999999999997
No 480
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=79.35 E-value=0.79 Score=39.77 Aligned_cols=18 Identities=6% Similarity=-0.007 Sum_probs=16.0
Q ss_pred EEecCcCChHHHHHHHhc
Q psy6613 150 IITRVTADISLAKRSLMS 167 (510)
Q Consensus 150 I~GPsGvGKsTL~~rLL~ 167 (510)
|.||+|+|||++.+.+..
T Consensus 48 l~G~~G~GKT~la~~~~~ 65 (187)
T 2p65_A 48 LLGDPGVGKTAIVEGLAI 65 (187)
T ss_dssp EESCGGGCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHH
Confidence 399999999999988876
No 481
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=79.25 E-value=1.1 Score=46.32 Aligned_cols=21 Identities=10% Similarity=0.162 Sum_probs=17.7
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 37 Ge~~~llGpnGsGKSTLLr~iaG 59 (372)
T 1v43_A 37 GEFLVLLGPSGCGKTTTLRMIAG 59 (372)
T ss_dssp TCEEEEECCTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCChHHHHHHHHHc
Confidence 3444 99999999999998876
No 482
>2efe_B Small GTP-binding protein-like; GEF, GTPase, VPS9, nucleotide, transport protein; HET: GNH; 2.08A {Arabidopsis thaliana} PDB: 2efd_B 2efc_B* 2efh_B*
Probab=79.23 E-value=0.9 Score=39.38 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 14 ki~v~G~~~~GKSsli~~l~~ 34 (181)
T 2efe_B 14 KLVLLGDVGAGKSSLVLRFVK 34 (181)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 344 99999999999999997
No 483
>3kkq_A RAS-related protein M-RAS; GTP-binding, GTPase, signaling protein; HET: GDP; 1.20A {Mus musculus} SCOP: c.37.1.8 PDB: 3kkp_A* 3kko_A* 3pit_A* 3pir_A* 1x1r_A* 1x1s_A*
Probab=79.21 E-value=0.88 Score=39.73 Aligned_cols=17 Identities=6% Similarity=-0.058 Sum_probs=16.4
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+|++|||||||.++|+.
T Consensus 24 ~G~~~~GKSsl~~~l~~ 40 (183)
T 3kkq_A 24 VGDGGVGKSALTIQFFQ 40 (183)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHh
Confidence 99999999999999996
No 484
>2oil_A CATX-8, RAS-related protein RAB-25; G-protein, GDP, structural genomics, structural genomics consortium, SGC, protein transport; HET: GDP; 2.30A {Homo sapiens}
Probab=79.18 E-value=0.86 Score=40.37 Aligned_cols=20 Identities=5% Similarity=0.004 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 27 ki~v~G~~~~GKSsLi~~l~~ 47 (193)
T 2oil_A 27 KVVLIGESGVGKTNLLSRFTR 47 (193)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHhc
Confidence 344 99999999999999997
No 485
>2q3h_A RAS homolog gene family, member U; GTPase, structural genomics, structural genomics consortium,; HET: GDP; 1.73A {Homo sapiens}
Probab=79.11 E-value=1.1 Score=40.06 Aligned_cols=20 Identities=5% Similarity=-0.076 Sum_probs=17.9
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||+|.++|+.
T Consensus 22 ki~~~G~~~~GKssl~~~l~~ 42 (201)
T 2q3h_A 22 KCVLVGDGAVGKTSLVVSYTT 42 (201)
T ss_dssp EEEEECSTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 454 99999999999999997
No 486
>3con_A GTPase NRAS; structural genomics consortium, SGC, GDP, oncogene, disease mutation, golgi apparatus, GTP-binding, lipoprotein membrane, methylation; HET: GDP; 1.65A {Homo sapiens} PDB: 2pmx_A* 3gft_A* 4q21_A*
Probab=79.07 E-value=0.89 Score=40.06 Aligned_cols=20 Identities=10% Similarity=0.069 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 23 ki~vvG~~~~GKSsli~~l~~ 43 (190)
T 3con_A 23 KLVVVGAGGVGKSALTIQLIQ 43 (190)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 344 99999999999999987
No 487
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=79.05 E-value=1 Score=44.78 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+-|..
T Consensus 64 Ge~~~i~G~NGsGKSTLlk~l~G 86 (290)
T 2bbs_A 64 GQLLAVAGSTGAGKTSLLMMIMG 86 (290)
T ss_dssp TCEEEEEESTTSSHHHHHHHHTT
T ss_pred CCEEEEECCCCCcHHHHHHHHhc
Confidence 4444 99999999999998776
No 488
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=78.94 E-value=3 Score=44.06 Aligned_cols=72 Identities=15% Similarity=0.199 Sum_probs=40.7
Q ss_pred eEEecCcCChHHHHHHHhc-----CCCCceeeecCCCchh----hhhhhc--------------------ccHHHHHHHH
Q psy6613 149 IIITRVTADISLAKRSLMS-----NPSKRAIMERSNSRSS----VLTEVQ--------------------TEIERVYELA 199 (510)
Q Consensus 149 pI~GPsGvGKsTL~~rLL~-----~P~~F~~sVshTTR~p----Fe~~I~--------------------TslesI~~vi 199 (510)
.|+||+|+|||||.+.|.. +++.+.+.+-.--|.. |.+.+. +-+..-+...
T Consensus 178 ~IvG~sG~GKTtLl~~Iar~i~~~~~~v~~I~~lIGER~~Ev~~~~~~~~~~vV~atadep~~~r~~~a~~alt~AEyfr 257 (422)
T 3ice_A 178 LIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLV 257 (422)
T ss_dssp EEECCSSSSHHHHHHHHHHHHHHHCTTSEEEEEEESSCHHHHHHHHTTCSSEEEEECTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCChhHHHHHHHHHHhhcCCCeeEEEEEecCChHHHHHHHHHhCeEEEEeCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4599999999999987653 5654343333333333 222211 1122223344
Q ss_pred HcCCeEEEEeccCCchhHhhh
Q psy6613 200 STLQLVVLDCDTINHPSQLAK 220 (510)
Q Consensus 200 ~sGKi~ILDID~qg~~lq~lk 220 (510)
.+|++|++=+|--..-++..+
T Consensus 258 d~G~dVLil~DslTR~A~A~r 278 (422)
T 3ice_A 258 EHKKDVIILLDSITRLARAYN 278 (422)
T ss_dssp HTSCEEEEEEECHHHHHHHHH
T ss_pred hcCCCEEEEEeCchHHHHHHH
Confidence 689999998886443344444
No 489
>2g6b_A RAS-related protein RAB-26; G-protein, GTP analogue, structural genomics, structural genomics consortium, SGC, unknown function; HET: GNP; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=78.94 E-value=0.91 Score=39.31 Aligned_cols=20 Identities=0% Similarity=-0.039 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 12 ~i~v~G~~~~GKssli~~l~~ 32 (180)
T 2g6b_A 12 KVMLVGDSGVGKTCLLVRFKD 32 (180)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHh
Confidence 344 99999999999999987
No 490
>1mh1_A RAC1; GTP-binding, GTPase, small G-protein, RHO family, RAS super family; HET: GNP; 1.38A {Homo sapiens} SCOP: c.37.1.8 PDB: 1hh4_A* 2p2l_A* 2h7v_A* 1g4u_R* 1i4d_D* 1i4l_D* 2vrw_A 1e96_A* 1i4t_D* 2rmk_A* 2yin_C 1ryf_A* 1ryh_A* 3su8_A* 3sua_A* 2fju_A* 1he1_C* 2nz8_A 1foe_B 3bji_C ...
Probab=78.91 E-value=0.91 Score=39.42 Aligned_cols=20 Identities=5% Similarity=-0.079 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 7 ~i~~~G~~~~GKssl~~~l~~ 27 (186)
T 1mh1_A 7 KCVVVGDGAVGKTCLLISYTT 27 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 344 99999999999999986
No 491
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=78.89 E-value=0.77 Score=46.10 Aligned_cols=17 Identities=24% Similarity=0.108 Sum_probs=15.9
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+|||||.+-|..
T Consensus 86 vG~sGsGKSTLl~ll~g 102 (306)
T 3nh6_A 86 VGPSGAGKSTILRLLFR 102 (306)
T ss_dssp ESSSCHHHHHHHHHHTT
T ss_pred ECCCCchHHHHHHHHHc
Confidence 99999999999998876
No 492
>3tkl_A RAS-related protein RAB-1A; vesicle trafficking, protein transport-protein binding compl; HET: GTP; 2.18A {Homo sapiens}
Probab=78.87 E-value=0.91 Score=40.00 Aligned_cols=20 Identities=10% Similarity=-0.004 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 18 ki~v~G~~~~GKSsli~~l~~ 38 (196)
T 3tkl_A 18 KLLLIGDSGVGKSCLLLRFAD 38 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECcCCCCHHHHHHHHHc
Confidence 444 99999999999999997
No 493
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=78.87 E-value=1.1 Score=40.64 Aligned_cols=17 Identities=0% Similarity=-0.003 Sum_probs=15.5
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+...|..
T Consensus 29 ~G~~GsGKTtl~~~l~~ 45 (235)
T 2w0m_A 29 TGEPGTGKTIFSLHFIA 45 (235)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred EcCCCCCHHHHHHHHHH
Confidence 99999999999998774
No 494
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=78.69 E-value=1 Score=45.65 Aligned_cols=17 Identities=24% Similarity=0.178 Sum_probs=15.5
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
+||+|+||||+.+.|..
T Consensus 98 ~GpsGSGKSTl~~~L~~ 114 (321)
T 3tqc_A 98 AGSVAVGKSTTSRVLKA 114 (321)
T ss_dssp ECCTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 89999999999988765
No 495
>2g3y_A GTP-binding protein GEM; small GTPase, GDP, inactive state, RGK family, structur genomics, structural genomics consortium, SGC, signaling PR; HET: GDP; 2.40A {Homo sapiens} SCOP: c.37.1.8
Probab=78.65 E-value=1.3 Score=41.46 Aligned_cols=20 Identities=10% Similarity=0.049 Sum_probs=17.6
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|.+|||||+|.++++.
T Consensus 39 kVvlvG~~~vGKSSLl~r~~~ 59 (211)
T 2g3y_A 39 RVVLIGEQGVGKSTLANIFAG 59 (211)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 444 99999999999999985
No 496
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=78.65 E-value=5.7 Score=41.97 Aligned_cols=17 Identities=6% Similarity=-0.123 Sum_probs=16.0
Q ss_pred EecCcCChHHHHHHHhc
Q psy6613 151 ITRVTADISLAKRSLMS 167 (510)
Q Consensus 151 ~GPsGvGKsTL~~rLL~ 167 (510)
.||+|+|||++.+.|.+
T Consensus 83 ~GppGtGKTtla~~la~ 99 (516)
T 1sxj_A 83 YGPPGIGKTTAAHLVAQ 99 (516)
T ss_dssp ECSTTSSHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHH
Confidence 99999999999998887
No 497
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=78.63 E-value=1 Score=46.71 Aligned_cols=21 Identities=14% Similarity=0.221 Sum_probs=17.6
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
|.++ +||+|+|||||.+.|..
T Consensus 47 Ge~~~llGpsGsGKSTLLr~iaG 69 (390)
T 3gd7_A 47 GQRVGLLGRTGSGKSTLLSAFLR 69 (390)
T ss_dssp TCEEEEEESTTSSHHHHHHHHHT
T ss_pred CCEEEEECCCCChHHHHHHHHhC
Confidence 4444 99999999999998776
No 498
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=78.55 E-value=0.96 Score=45.05 Aligned_cols=21 Identities=10% Similarity=0.025 Sum_probs=17.8
Q ss_pred CCeE--EecCcCChHHHHHHHhc
Q psy6613 147 GMII--ITRVTADISLAKRSLMS 167 (510)
Q Consensus 147 ~RpI--~GPsGvGKsTL~~rLL~ 167 (510)
+.++ +||+|+||||+.+.|..
T Consensus 100 g~vi~lvG~nGsGKTTll~~Lag 122 (302)
T 3b9q_A 100 PAVIMIVGVNGGGKTTSLGKLAH 122 (302)
T ss_dssp CEEEEEECCTTSCHHHHHHHHHH
T ss_pred CcEEEEEcCCCCCHHHHHHHHHH
Confidence 4555 99999999999998875
No 499
>2bov_A RAla, RAS-related protein RAL-A; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Homo sapiens}
Probab=78.46 E-value=0.95 Score=40.23 Aligned_cols=20 Identities=15% Similarity=0.061 Sum_probs=17.7
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 16 ki~v~G~~~~GKSsli~~l~~ 36 (206)
T 2bov_A 16 KVIMVGSGGVGKSALTLQFMY 36 (206)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 444 99999999999999987
No 500
>1zbd_A Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: c.37.1.8
Probab=78.33 E-value=0.98 Score=40.34 Aligned_cols=20 Identities=10% Similarity=-0.021 Sum_probs=17.8
Q ss_pred CeE-EecCcCChHHHHHHHhc
Q psy6613 148 MII-ITRVTADISLAKRSLMS 167 (510)
Q Consensus 148 RpI-~GPsGvGKsTL~~rLL~ 167 (510)
+++ +|++|||||||.++|+.
T Consensus 10 ki~v~G~~~~GKSsli~~l~~ 30 (203)
T 1zbd_A 10 KILIIGNSSVGKTSFLFRYAD 30 (203)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 444 99999999999999997
Done!