Your job contains 1 sequence.
>psy6626
MDDRRVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYD
VIKSTPTGT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6626
(69 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0025864 - symbol:Crag "Calmodulin-binding protein ... 163 1.7e-10 1
WB|WBGene00018681 - symbol:F52C12.4 species:6239 "Caenorh... 157 7.3e-10 1
UNIPROTKB|F1N032 - symbol:F1N032 "Uncharacterized protein... 137 1.2e-07 1
MGI|MGI:1914769 - symbol:Dennd4c "DENN/MADD domain contai... 129 8.2e-07 1
UNIPROTKB|Q7Z401 - symbol:DENND4A "C-myc promoter-binding... 128 1.0e-06 1
UNIPROTKB|F1SNF8 - symbol:DENND4C "Uncharacterized protei... 128 1.0e-06 1
UNIPROTKB|F1SFW6 - symbol:DENND4B "Uncharacterized protei... 110 6.6e-05 1
UNIPROTKB|F1PSN6 - symbol:DENND4B "Uncharacterized protei... 109 8.4e-05 1
UNIPROTKB|O75064 - symbol:DENND4B "DENN domain-containing... 106 0.00018 1
RGD|1560320 - symbol:Dennd4b "DENN/MADD domain containing... 104 0.00029 1
MGI|MGI:2446201 - symbol:Dennd4b "DENN/MADD domain contai... 99 0.00097 1
>FB|FBgn0025864 [details] [associations]
symbol:Crag "Calmodulin-binding protein related to a Rab3
GDP/GTP exchange protein" species:7227 "Drosophila melanogaster"
[GO:0005516 "calmodulin binding" evidence=IPI] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS;NAS]
[GO:0008105 "asymmetric protein localization" evidence=IMP]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0070831 "basement
membrane assembly" evidence=IMP] [GO:0055037 "recycling endosome"
evidence=IDA] GO:GO:0005938 EMBL:AE014298 GO:GO:0055037
GO:GO:0005516 GO:GO:0008105 InterPro:IPR005112 InterPro:IPR001194
InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141 Pfam:PF03456
SMART:SM00801 SMART:SM00799 SMART:SM00800 PROSITE:PS50947
PROSITE:PS50211 PROSITE:PS50946 InterPro:IPR023341 PROSITE:PS51498
GeneTree:ENSGT00550000074509 GO:GO:0070831 FlyBase:FBgn0025864
ChiTaRS:Crag UniGene:Dm.7132 GeneID:31800 KEGG:dme:Dmel_CG12737
CTD:31800 GenomeRNAi:31800 NextBio:775375 RefSeq:NP_525080.3
ProteinModelPortal:Q9W3D3 STRING:Q9W3D3 EnsemblMetazoa:FBtr0071219
UCSC:CG12737-RA InParanoid:Q9W3D3 OMA:TWKILPR PhylomeDB:Q9W3D3
ArrayExpress:Q9W3D3 Bgee:Q9W3D3 Uniprot:Q9W3D3
Length = 1671
Score = 163 (62.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 30/69 (43%), Positives = 46/69 (66%)
Query: 1 MDDRRVADYFVVCGLPDD-QAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGY 59
M+++R+ADYFVV G+P++ Q E ++ ++ PITD+ V FP LGE VP+GY
Sbjct: 1 MEEKRIADYFVVAGMPENPQLLQENSFNDSGRLRAATTIEPITDIGVYFPLLGEEVPEGY 60
Query: 60 DVIKSTPTG 68
+++ TPTG
Sbjct: 61 EILSHTPTG 69
>WB|WBGene00018681 [details] [associations]
symbol:F52C12.4 species:6239 "Caenorhabditis elegans"
[GO:0040013 "negative regulation of locomotion" evidence=IMP]
InterPro:IPR002885 GO:GO:0040013 PROSITE:PS51375 TIGRFAMs:TIGR00756
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
InterPro:IPR023341 PROSITE:PS51498 GeneTree:ENSGT00550000074509
eggNOG:NOG315114 EMBL:FO081438 PIR:F88640 RefSeq:NP_500145.2
UniGene:Cel.20233 ProteinModelPortal:Q9TXV4 PaxDb:Q9TXV4
EnsemblMetazoa:F52C12.4 GeneID:186100 KEGG:cel:CELE_F52C12.4
UCSC:F52C12.4 CTD:186100 WormBase:F52C12.4 HOGENOM:HOG000019230
InParanoid:Q9TXV4 OMA:YRILIEL NextBio:930630 Uniprot:Q9TXV4
Length = 1635
Score = 157 (60.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 2 DDRRVADYFVVCGLPDDQA-EWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYD 60
D+RR+ ++FV+ GL ++Q E + +SE ++ APITD+AVIFP+LGE PDG+D
Sbjct: 32 DERRLFEHFVIAGLAENQPLERLKPSSEECGLRNTQPLAPITDIAVIFPSLGEKPPDGFD 91
Query: 61 VIKSTPTG 68
VI+ST G
Sbjct: 92 VIESTTLG 99
>UNIPROTKB|F1N032 [details] [associations]
symbol:F1N032 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030904 "retromer complex" evidence=IEA] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
InterPro:IPR023341 PROSITE:PS51498 GeneTree:ENSGT00550000074509
OMA:LKLCFSR EMBL:DAAA02022309 EMBL:DAAA02022310 IPI:IPI00691563
Ensembl:ENSBTAT00000004032 Uniprot:F1N032
Length = 1956
Score = 137 (53.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/64 (46%), Positives = 40/64 (62%)
Query: 5 RVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIKS 64
RV DYFVV GL D ++E + KS APITD+AVI + GE VP+GY +++
Sbjct: 8 RVVDYFVVAGLTDTSTLLDQEINRLDT-KSTGPKAPITDIAVINKSAGETVPEGYTCVEA 66
Query: 65 TPTG 68
TP+G
Sbjct: 67 TPSG 70
>MGI|MGI:1914769 [details] [associations]
symbol:Dennd4c "DENN/MADD domain containing 4C"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0030904 "retromer complex" evidence=IDA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] MGI:MGI:1914769 GO:GO:0005829
GO:GO:0005886 GO:GO:0032869 GO:GO:0015031 GO:GO:0030659
GO:GO:0072659 PROSITE:PS51375 GO:GO:0032593 GO:GO:0017112
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
HOGENOM:HOG000231590 HOVERGEN:HBG058313 InterPro:IPR023341
PROSITE:PS51498 GeneTree:ENSGT00550000074509 CTD:55667
eggNOG:NOG315114 OMA:LKLCFSR OrthoDB:EOG43BMMZ EMBL:AL772228
EMBL:BX005084 EMBL:BC146602 EMBL:AK155220 IPI:IPI00348488
IPI:IPI00855125 IPI:IPI00974968 RefSeq:NP_908976.1
UniGene:Mm.273718 UniGene:Mm.470929 PRIDE:A6H8H2
Ensembl:ENSMUST00000082026 GeneID:329877 KEGG:mmu:329877
UCSC:uc008tmb.2 InParanoid:A2AJX5 NextBio:399024
Genevestigator:A6H8H2 GO:GO:0030904 Uniprot:A6H8H2
Length = 1906
Score = 129 (50.5 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 5 RVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIKS 64
RV DYFVV GL D ++E + + S APITD+AVI + GE VP+GY +++
Sbjct: 8 RVTDYFVVAGLTDTSTLLDQEINR-TDTNSIGPKAPITDIAVIIKSAGETVPEGYTCVEA 66
Query: 65 TPT 67
TP+
Sbjct: 67 TPS 69
>UNIPROTKB|Q7Z401 [details] [associations]
symbol:DENND4A "C-myc promoter-binding protein"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=IDA] InterPro:IPR002885 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 PROSITE:PS51375 GO:GO:0017112
TIGRFAMs:TIGR00756 InterPro:IPR005112 InterPro:IPR001194
InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141 Pfam:PF03456
SMART:SM00801 SMART:SM00799 SMART:SM00800 PROSITE:PS50947
PROSITE:PS50211 PROSITE:PS50946 HOGENOM:HOG000231590
HOVERGEN:HBG058313 InterPro:IPR023341 PROSITE:PS51498
eggNOG:NOG315114 EMBL:AF534403 EMBL:AL832602 EMBL:AL833317
EMBL:AC011939 EMBL:BC041706 EMBL:AK091368 EMBL:X63417
IPI:IPI00396063 IPI:IPI00921122 PIR:I37904 RefSeq:NP_001138295.1
RefSeq:NP_005839.3 UniGene:Hs.654567 ProteinModelPortal:Q7Z401
IntAct:Q7Z401 MINT:MINT-1631757 STRING:Q7Z401 PhosphoSite:Q7Z401
DMDM:88909230 PaxDb:Q7Z401 PRIDE:Q7Z401 DNASU:10260
Ensembl:ENST00000431932 Ensembl:ENST00000443035 GeneID:10260
KEGG:hsa:10260 UCSC:uc002aph.3 CTD:10260 GeneCards:GC15M065952
H-InvDB:HIX0012356 HGNC:HGNC:24321 MIM:600382 neXtProt:NX_Q7Z401
PharmGKB:PA134887513 InParanoid:Q7Z401 OMA:NIQSRCF
OrthoDB:EOG4M65GS GenomeRNAi:10260 NextBio:38872
ArrayExpress:Q7Z401 Bgee:Q7Z401 CleanEx:HS_DENND4A
Genevestigator:Q7Z401 GermOnline:ENSG00000174485 Uniprot:Q7Z401
Length = 1863
Score = 128 (50.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 32/65 (49%), Positives = 37/65 (56%)
Query: 5 RVADYFVVCGLPDDQAEWEEETS-EHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIK 63
RVADYFVV GL D EEE + +K PITD++VI +LGE VP Y I
Sbjct: 8 RVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVPQDYICID 67
Query: 64 STPTG 68
TPTG
Sbjct: 68 VTPTG 72
>UNIPROTKB|F1SNF8 [details] [associations]
symbol:DENND4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030904 "retromer complex" evidence=IEA] [GO:0017112
"Rab guanyl-nucleotide exchange factor activity" evidence=IEA]
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
InterPro:IPR023341 PROSITE:PS51498 GeneTree:ENSGT00550000074509
OMA:LKLCFSR EMBL:CU467038 EMBL:CU571191 Ensembl:ENSSSCT00000005700
Uniprot:F1SNF8
Length = 1905
Score = 128 (50.1 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 5 RVADYFVVCGLPDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDVIKS 64
RV DYFVV GL D ++E + KS APITD+AVI + GE VP+GY +++
Sbjct: 8 RVTDYFVVAGLTDTSTLLDQEINRLDT-KSIGPKAPITDIAVINKSAGETVPEGYTCVEA 66
Query: 65 TPT 67
TP+
Sbjct: 67 TPS 69
>UNIPROTKB|F1SFW6 [details] [associations]
symbol:DENND4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR002885 PROSITE:PS51375 InterPro:IPR005112
InterPro:IPR001194 InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141
Pfam:PF03456 SMART:SM00801 SMART:SM00799 SMART:SM00800
PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946 OMA:GPHRLPL
InterPro:IPR023341 PROSITE:PS51498 GeneTree:ENSGT00550000074509
EMBL:CU407290 Ensembl:ENSSSCT00000007196 Uniprot:F1SFW6
Length = 1496
Score = 110 (43.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 31/67 (46%), Positives = 37/67 (55%)
Query: 5 RVADYFVVCGLPDDQAEWEEET--SEHSHYKSNHNDA-PITDLAVIFPTLGEFVPDGYDV 61
R+ DYFV+ GL D A EET E S A PITD+AVI LGE VP GY
Sbjct: 8 RLVDYFVIAGLAGDGAPIPEETWVPEPSGPLRPPRPAEPITDVAVIARALGEEVPQGYTC 67
Query: 62 IKSTPTG 68
I+++ G
Sbjct: 68 IQASTGG 74
>UNIPROTKB|F1PSN6 [details] [associations]
symbol:DENND4B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR002885 PROSITE:PS51375
TIGRFAMs:TIGR00756 InterPro:IPR005112 InterPro:IPR001194
InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141 Pfam:PF03456
SMART:SM00801 SMART:SM00799 SMART:SM00800 PROSITE:PS50947
PROSITE:PS50211 PROSITE:PS50946 OMA:GPHRLPL InterPro:IPR023341
PROSITE:PS51498 GeneTree:ENSGT00550000074509 EMBL:AAEX03005353
EMBL:AAEX03005354 Ensembl:ENSCAFT00000027606 Uniprot:F1PSN6
Length = 1494
Score = 109 (43.4 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 31/67 (46%), Positives = 37/67 (55%)
Query: 5 RVADYFVVCGLPDDQAEWEEETS--EHSHYKSNHNDA-PITDLAVIFPTLGEFVPDGYDV 61
R+ DYFV+ GL + A EET E S A PITD+AVI LGE VP GY
Sbjct: 8 RLVDYFVIAGLAGNGAPIPEETRVPEPSGPLRPPRPAEPITDMAVIARALGEEVPQGYTC 67
Query: 62 IKSTPTG 68
I+S+ G
Sbjct: 68 IQSSAGG 74
>UNIPROTKB|O75064 [details] [associations]
symbol:DENND4B "DENN domain-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] InterPro:IPR002885 GO:GO:0005794
PROSITE:PS51375 GO:GO:0017112 EMBL:CH471121 EMBL:AL358472
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
EMBL:AB007945 IPI:IPI00847759 PIR:T00257 RefSeq:NP_055671.2
UniGene:Hs.728814 ProteinModelPortal:O75064 IntAct:O75064
PhosphoSite:O75064 PaxDb:O75064 PRIDE:O75064 DNASU:9909
Ensembl:ENST00000361217 GeneID:9909 KEGG:hsa:9909 UCSC:uc001fdd.1
CTD:9909 GeneCards:GC01M153901 H-InvDB:HIX0029487 HGNC:HGNC:29044
HPA:HPA040188 neXtProt:NX_O75064 PharmGKB:PA142671629
eggNOG:NOG285930 HOGENOM:HOG000231590 HOVERGEN:HBG058313
OMA:GPHRLPL ChiTaRS:DENND4B GenomeRNAi:9909 NextBio:37373
ArrayExpress:O75064 Bgee:O75064 CleanEx:HS_DENND4B
Genevestigator:O75064 InterPro:IPR023341 PROSITE:PS51498
Uniprot:O75064
Length = 1496
Score = 106 (42.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/67 (46%), Positives = 37/67 (55%)
Query: 5 RVADYFVVCGLPDDQAEWEEET--SEHSHYKSNHNDA-PITDLAVIFPTLGEFVPDGYDV 61
R+ DYFVV GL + A EET E S A PITD+AVI LGE VP GY
Sbjct: 8 RLVDYFVVAGLAGNGAPIPEETWVPEPSGPLRPPRPAEPITDVAVIARALGEEVPQGYTC 67
Query: 62 IKSTPTG 68
I+++ G
Sbjct: 68 IQASAGG 74
>RGD|1560320 [details] [associations]
symbol:Dennd4b "DENN/MADD domain containing 4B" species:10116
"Rattus norvegicus" [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISO] InterPro:IPR002885 RGD:1560320 PROSITE:PS51375
TIGRFAMs:TIGR00756 InterPro:IPR005112 InterPro:IPR001194
InterPro:IPR005113 Pfam:PF03455 Pfam:PF02141 Pfam:PF03456
SMART:SM00801 SMART:SM00799 SMART:SM00800 PROSITE:PS50947
PROSITE:PS50211 PROSITE:PS50946 InterPro:IPR023341 PROSITE:PS51498
GeneTree:ENSGT00550000074509 IPI:IPI00373236
Ensembl:ENSRNOT00000049810 UCSC:RGD:1560320 ArrayExpress:F1LTT7
Uniprot:F1LTT7
Length = 1512
Score = 104 (41.7 bits), Expect = 0.00029, P = 0.00029
Identities = 28/67 (41%), Positives = 35/67 (52%)
Query: 5 RVADYFVVCGLPDDQAEWEEET---SEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGYDV 61
R+ DYFVV GL + A EET + PITD+AVI LGE VP GY
Sbjct: 18 RLVDYFVVAGLAGNGAPIPEETWVPEPTGPLRPPRPAEPITDVAVIARALGEEVPQGYTC 77
Query: 62 IKSTPTG 68
I+++ G
Sbjct: 78 IQTSAGG 84
>MGI|MGI:2446201 [details] [associations]
symbol:Dennd4b "DENN/MADD domain containing 4B"
species:10090 "Mus musculus" [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO] InterPro:IPR002885 MGI:MGI:2446201
GO:GO:0005794 PROSITE:PS51375 GO:GO:0017112 TIGRFAMs:TIGR00756
InterPro:IPR005112 InterPro:IPR001194 InterPro:IPR005113
Pfam:PF03455 Pfam:PF02141 Pfam:PF03456 SMART:SM00801 SMART:SM00799
SMART:SM00800 PROSITE:PS50947 PROSITE:PS50211 PROSITE:PS50946
CTD:9909 eggNOG:NOG285930 HOVERGEN:HBG058313 ChiTaRS:DENND4B
InterPro:IPR023341 PROSITE:PS51498 EMBL:AY512564 EMBL:AK155638
EMBL:BC026996 EMBL:BC040460 EMBL:BC049972 EMBL:BC066102
EMBL:AK122294 IPI:IPI00153183 IPI:IPI00626451 IPI:IPI00762164
RefSeq:NP_958809.3 UniGene:Mm.30571 ProteinModelPortal:Q3U1Y4
PhosphoSite:Q3U1Y4 PaxDb:Q3U1Y4 PRIDE:Q3U1Y4
Ensembl:ENSMUST00000098914 Ensembl:ENSMUST00000129564 GeneID:229541
KEGG:mmu:229541 UCSC:uc008qbx.2 UCSC:uc008qbz.1
GeneTree:ENSGT00550000074509 InParanoid:Q3U1Y4 OrthoDB:EOG44MXR8
NextBio:379491 Bgee:Q3U1Y4 CleanEx:MM_DENND4B Genevestigator:Q3U1Y4
Uniprot:Q3U1Y4
Length = 1499
Score = 99 (39.9 bits), Expect = 0.00097, P = 0.00097
Identities = 27/69 (39%), Positives = 36/69 (52%)
Query: 5 RVADYFVVCGL-----PDDQAEWEEETSEHSHYKSNHNDAPITDLAVIFPTLGEFVPDGY 59
R+ DYFVV GL P + +W E + + PITD+AVI LGE VP GY
Sbjct: 8 RLVDYFVVAGLAGNGAPIPEEKWVPEPT--GPLRPPRPAEPITDVAVIARALGEEVPQGY 65
Query: 60 DVIKSTPTG 68
I+++ G
Sbjct: 66 TCIQTSAGG 74
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.135 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 69 69 0.00091 102 3 11 23 0.39 29
29 0.39 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 552 (59 KB)
Total size of DFA: 114 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.15u 0.15s 9.30t Elapsed: 00:00:00
Total cpu time: 9.15u 0.15s 9.30t Elapsed: 00:00:00
Start: Thu Aug 15 13:57:50 2013 End: Thu Aug 15 13:57:50 2013