BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6627
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00657|CSPG4_RAT Chondroitin sulfate proteoglycan 4 OS=Rattus norvegicus GN=Cspg4
PE=1 SV=2
Length = 2326
Score = 74.7 bits (182), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 46 TKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTR 105
T + +A+L L+AG+ D+ LL+L+SG L+V + LG + + TP L D H+V +T
Sbjct: 57 TSQPEALLLLAAGQTDHLLLQLQSGHLQVRLALGQNELSLQTPADTVLSDSTTHTVVLTV 116
Query: 106 IEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEW-LRGCLSDVI 164
+ L+VD + T +P K L + YGLF+G G +L I LRGCL I
Sbjct: 117 SNSWAVLSVDGVLNTSAPIP-KASHLKVPYGLFVGSSGSLDLPYLKGISRPLRGCLHSAI 175
Query: 165 YNNIDTLK 172
N + L+
Sbjct: 176 LNGRNLLR 183
>sp|Q8VHY0|CSPG4_MOUSE Chondroitin sulfate proteoglycan 4 OS=Mus musculus GN=Cspg4 PE=1
SV=3
Length = 2327
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 46 TKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTR 105
T + +A+L L+AG+ D+ LL+L SG L+V + LG + ++ TP L D H+V +T
Sbjct: 57 TSQPEALLLLAAGQDDHLLLQLHSGCLQVRLALGQKELKLQTPADTVLSDSAPHTVVLTV 116
Query: 106 IEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEW-LRGCLSDVI 164
++ L+VD + T +P + L YGLF+G G +L I LRGCL I
Sbjct: 117 SDSWAVLSVDGVLNTSAPIP-RASHLKATYGLFVGSSGSLDLPYLKGISRPLRGCLHSAI 175
Query: 165 YNNIDTLK 172
N + L+
Sbjct: 176 LNGRNLLR 183
>sp|P97846|CNTP1_RAT Contactin-associated protein 1 OS=Rattus norvegicus GN=Cntnap1 PE=1
SV=1
Length = 1381
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 46 TKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGA-------GDTEISTPRGLRLDDLL 97
T+ D +L + G + DY L L+ L +H++LG+ G T +S G L+DL
Sbjct: 206 TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSA--GGVLNDLS 263
Query: 98 WHSVNVTRIEANVTLTVD-LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWL 156
WH V V R LT+D +H L G F LN+ +FIGG L +
Sbjct: 264 WHYVRVDRYGREANLTLDGYVHRFV--LNGDFERLNLENEIFIGGLVGAARKNLAYRHNF 321
Query: 157 RGCLSDVIYNNIDTLKRARARSSQADAQG 185
RGC+ +VIYN I+ + A R S+ +G
Sbjct: 322 RGCIENVIYNRINIAEMAVQRHSRITFEG 350
Score = 33.5 bits (75), Expect = 0.85, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 39/154 (25%)
Query: 41 FTSPLTKRSDAILFLSAGKIDY-CLLRLESGRLKVHINLGAGDTEISTPRGLRLD----- 94
F+ + +L++S+ DY +L E G L++ LG ++P +L
Sbjct: 1087 FSFSTSSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLG------TSPYVYQLTTRPVT 1140
Query: 95 DLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE-LFLGHI 153
D HSVN+TR+ N+ + VD T +K + L + Q D + L+LG +
Sbjct: 1141 DGQPHSVNITRVYRNLFIQVDYFPLTEQK-----------FSLLVDSQLDSPKALYLGRV 1189
Query: 154 ---------------EWLRGCLSDVIYNNIDTLK 172
GCLS V +NN+ LK
Sbjct: 1190 METGVIDPEIQRYNTPGFSGCLSGVRFNNVAPLK 1223
>sp|Q6UVK1|CSPG4_HUMAN Chondroitin sulfate proteoglycan 4 OS=Homo sapiens GN=CSPG4 PE=1
SV=2
Length = 2322
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 58 GKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLI 117
G D+ LL+L SGRL+V + LG + + TP L D + H+V +T +E TL+VD
Sbjct: 69 GPADHLLLQLYSGRLQVRLVLGQEELRLQTPAETLLSDSIPHTVVLTVVEGWATLSVDGF 128
Query: 118 HTTFEKLPGKFFELNIHYGLFIGGQGDFTELFL-GHIEWLRGCLSDVIYNNIDTLK 172
+PG L + YGLF+GG G +L G LRGCL N L+
Sbjct: 129 LNASSAVPGA--PLEVPYGLFVGGTGTLGLPYLRGTSRPLRGCLHAATLNGRSLLR 182
>sp|Q0V8S9|CNTP5_CHICK Contactin-associated protein-like 5 OS=Gallus gallus GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGD-----TEISTPR 89
++SL F S + D +LF G + DY L L+ G+L +HINLG + + S
Sbjct: 204 VVSLKFKS---MQEDGVLFHGEGQRGDYITLELQKGKLSLHINLGDSNLHFTNSHTSVTL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF 149
G LDD WHSV + R V TVD HT + G L+I Y L GG +
Sbjct: 261 GSLLDDQHWHSVLIERFNKQVNFTVDK-HTQHFRTKGDSDHLDIDYELSFGGIPVPGKPG 319
Query: 150 LGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
+ GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFQRKNFHGCIENLYYNGVNIIDLAKRRKPQ 350
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 10 DEALSNAATPTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES 69
D NAA+ S +H E+ + F T S + + G D+ + + S
Sbjct: 786 DRQFWNAASFNTEASYLHFPTFHAEVSADISFFFKTTSLS-GVFLENLGMKDFIRVEIRS 844
Query: 70 GR-LKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGK- 127
+ + I++G G TE + L+D WH V R +L VD + + P +
Sbjct: 845 PKEITFSIDVGNGPTEATVQSPTPLNDNQWHYVRAERNLKQTSLQVDNLPKKVLEAPAEG 904
Query: 128 FFELNIHYGLFIGGQGDFTELFLGHIEWL 156
F L ++ LF+GG + FLG I L
Sbjct: 905 HFRLQLNSQLFVGGTASRQKGFLGCIRSL 933
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 64 LLRLESGRLKVHINLGAGD-TEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE 122
L+ L GRL + I A D EIS G L D LWHS+N+ +TLT+D T
Sbjct: 417 LVYLHGGRLTLLIQKVAEDPVEIS--EGTNLHDGLWHSLNINARRHRITLTLDNNAATAS 474
Query: 123 KLP--GKFFELNIHYGLFIGGQGDFTE-LFLGHIEWLRGCLSDVIYNN 167
+ + N +Y F G +FT+ L I +GC+ + +N
Sbjct: 475 HATTVSRIYSGNSYY--FGGCPDNFTDSQCLNPITAFQGCMRLIFIDN 520
>sp|O54991|CNTP1_MOUSE Contactin-associated protein 1 OS=Mus musculus GN=Cntnap1 PE=1 SV=2
Length = 1385
Score = 65.1 bits (157), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 46 TKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGA-------GDTEISTPRGLRLDDLL 97
T+ D +L + G + DY L L+ L +H++LG+ G T +S G L+DL
Sbjct: 206 TEEKDGLLLHTEGSQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHTTVSL--GGVLNDLS 263
Query: 98 WHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
WH V V R + T+D F L G F LN+ +FIGG L + R
Sbjct: 264 WHYVRVDRYGRDANFTLDGYAHHF-VLNGDFERLNLENEIFIGGLVGAARKNLAYRHNFR 322
Query: 158 GCLSDVIYNNIDTLKRARARSSQADAQG 185
GC+ +VIYN I+ + A R S+ +G
Sbjct: 323 GCIENVIYNRINIAEMAVMRHSRITFEG 350
Score = 33.5 bits (75), Expect = 0.86, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 39/143 (27%)
Query: 52 ILFLSAGKIDY-CLLRLESGRLKVHINLGAGDTEISTPRGLRLD-----DLLWHSVNVTR 105
+L++S+ DY +L E G L++ LG ++P +L D HSVN+TR
Sbjct: 1098 LLYVSSFVRDYMAVLIKEDGTLQLRYQLG------TSPYVYQLTTRPVTDGQPHSVNITR 1151
Query: 106 IEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE-LFLGHI----------- 153
+ N+ + VD T +K + L + Q D + L+LG +
Sbjct: 1152 VYRNLFIQVDYFPLTEQK-----------FSLLVDSQLDSPKALYLGRVMETGVIDPEIQ 1200
Query: 154 ----EWLRGCLSDVIYNNIDTLK 172
GCLS V +NN+ LK
Sbjct: 1201 RYNTPGFSGCLSGVRFNNVAPLK 1223
>sp|P78357|CNTP1_HUMAN Contactin-associated protein 1 OS=Homo sapiens GN=CNTNAP1 PE=1 SV=1
Length = 1384
Score = 64.7 bits (156), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 46 TKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGA-------GDTEISTPRGLRLDDLL 97
T+ D +L + G + DY L LE L +H++LG+ G T +S G L+D
Sbjct: 205 TEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSA--GGVLNDQH 262
Query: 98 WHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
WH V V R +V T+D F L G F LN+ +FIGG L + R
Sbjct: 263 WHYVRVDRFGRDVNFTLDGYVQRF-ILNGDFERLNLDTEMFIGGLVGAARKNLAYRHNFR 321
Query: 158 GCLSDVIYNNIDTLKRARARSSQADAQGK 186
GC+ +VI+N ++ A R S+ +GK
Sbjct: 322 GCIENVIFNRVNIADLAVRRHSRITFEGK 350
Score = 32.0 bits (71), Expect = 2.8, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 27/90 (30%)
Query: 99 HSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE-LFLGHI---- 153
HS+N+TR+ N+ + VD T +K + L + Q D + L+LG +
Sbjct: 1144 HSINITRVYRNLFIQVDYFPLTEQK-----------FSLLVDSQLDSPKALYLGRVMETG 1192
Query: 154 -----------EWLRGCLSDVIYNNIDTLK 172
GCLS V +NN+ LK
Sbjct: 1193 VIDPEIQRYNTPGFSGCLSGVRFNNVAPLK 1222
Score = 31.2 bits (69), Expect = 4.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 65 LRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
L L G++ V I +G ++ G RL+D WH VN E + +++D
Sbjct: 412 LTLSEGQVNVSI-AQSGRKKLQFAAGYRLNDGFWHEVNFVAQENHAVISID 461
>sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Homo sapiens GN=CNTNAP5 PE=2
SV=1
Length = 1306
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEIST--PR--- 89
+ISL F S + D +LF G + D+ L L+ GRL +H+NLG +S+ P
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQKGRLALHLNLGDSKARLSSSLPSATL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ V TVD HT + G+ L+I Y L GG G
Sbjct: 261 GSLLDDQHWHSVLIERVGKQVNFTVDK-HTQHFRTKGETDALDIDYELSFGGIPVPGKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFLK------KNFHGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Query: 31 YHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES-GRLKVHINLGAGDTEISTPR 89
+H E + F T S + + G D+ L + S + I++G G E+
Sbjct: 807 FHAEFSADISFFFKTTALS-GVFLENLGIKDFIRLEISSPSEITFAIDVGNGPVELVVQS 865
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVD-LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL 148
L+D WH V R +L VD L +T E F L ++ LF+GG +
Sbjct: 866 PSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGHFRLQLNSQLFVGGTSSRQKG 925
Query: 149 FLGHIEWL 156
FLG I L
Sbjct: 926 FLGCIRSL 933
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRL-ESGRLKVHINLGAGDTEISTPRGLRLDD 95
I+L F + T+ +LF+++ D+ ++ L ++G L+V +L +T + T +
Sbjct: 1040 IALSFVT--TQAPSLLLFINSSSQDFVVVLLCKNGSLQVRYHLNKEETHVFTIDADNFAN 1097
Query: 96 LLWHSVNVTRIEANVTLTVDL-IHTTFEKLPGKFFEL--NIHYGLFIGGQGDFTELFLGH 152
H + + R +T+ +D + ++ P F + ++ G G +E+ +
Sbjct: 1098 RRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRVIRSLTLGKVTENLGLDSEVAKAN 1157
Query: 153 IEWLRGCLSDVIYNNIDTLKRA 174
GC+S V YN+I LK A
Sbjct: 1158 AMGFAGCMSSVQYNHIAPLKAA 1179
>sp|Q0V8T0|CNTP5_CANFA Contactin-associated protein-like 5 OS=Canis familiaris GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTPR----- 89
+ISL F S + D +LF G + D+ L L+ GRL +H+NL +S+
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQKGRLALHLNLDDSKPRLSSSPPSVTL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ V +VD HT + G+ L+I Y L GG G
Sbjct: 261 GSLLDDQQWHSVLIERVGKQVNFSVDK-HTQHFRTKGEADALDIDYELSFGGIPVPGKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFLK------KNFHGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 37.0 bits (84), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 3/128 (2%)
Query: 31 YHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES-GRLKVHINLGAGDTEISTPR 89
+H E + F T S + + G D+ L + S + I++G G E+
Sbjct: 807 FHAEFSADISFFFKTTALS-GVFLENLGIKDFIRLEISSPSEITFAIDVGNGPVELIVHS 865
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVD-LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL 148
L+D WH + R +L VD L T E F L ++ LF+GG +
Sbjct: 866 PSLLNDNQWHYIRAERNLKETSLQVDSLPRMTRETSEEGHFRLQLNSQLFVGGTSSRQKG 925
Query: 149 FLGHIEWL 156
FLG I L
Sbjct: 926 FLGCIRSL 933
>sp|Q0V8T4|CTP5C_RAT Contactin-associated protein like 5-3 OS=Rattus norvegicus
GN=Cntnap5c PE=2 SV=1
Length = 1307
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEIST--PR--- 89
MISL F S + D +L G + DY L L++GRL +++NL G +S+ P
Sbjct: 205 MISLKFKS---MQGDGVLLHGEGQRGDYITLELQNGRLALYLNLDGGQARLSSIAPSAIL 261
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ TVD +T ++ + L+I Y L GG G
Sbjct: 262 GSLLDDQQWHSVLLERVGKQTNFTVD-TNTEHFQIKAETDALDIDYELSFGGIPIPSKPG 320
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ ++ YN ++ + A+ R Q
Sbjct: 321 TFLK------KSFHGCIENLYYNGVNIIDLAKRRKHQ 351
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 9/130 (6%)
Query: 32 HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES-GRLKVHINLGAGDTEISTPRG 90
H E I + F T S + + G D+ L L S + I++G G TE+
Sbjct: 810 HVEFSIDISFFFKTTALS-GVFIENLGIKDFLRLELSSPSEVTFAIDVGNGPTELLVQSP 868
Query: 91 LRLDDLLWHSVNVTRIEANVTLTVD----LIHTTFEKLPGKFFELNIHYGLFIGGQGDFT 146
L+D WH + R +L VD ++ T EK F+L ++ +F+GG
Sbjct: 869 SPLNDNQWHYIQAERNLKETSLQVDNFPRIMRETTEK---GHFQLQLNSQMFVGGTSSRQ 925
Query: 147 ELFLGHIEWL 156
+ FLG I L
Sbjct: 926 KGFLGCIRSL 935
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 64 LLRLESGRLKVHINLGAG-DTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE 122
LL LE G L++ I AG TEI T GL +D LWH V++ VTLT+D
Sbjct: 418 LLILEGGTLRLLIKKVAGHGTEIITGSGL--NDGLWHFVSINARRNRVTLTLD---NDAA 472
Query: 123 KLPGKFFELNIHYG--LFIGGQGD--FTELFLGHIEWLRGCLSDVIYNN 167
LP L I+ G + GG D L I+ +GC+ + +N
Sbjct: 473 SLPPDISWLQIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDN 521
>sp|Q99P47|CNTP4_MOUSE Contactin-associated protein-like 4 OS=Mus musculus GN=Cntnap4 PE=2
SV=2
Length = 1310
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 10/151 (6%)
Query: 36 MISLLFTSPLTKRSDAILFLSAGKI-DYCLLRLESGRLKVHINLG-----AGDTEISTPR 89
+ISL F T SD IL AG D+ L L G+L + IN G + T I+
Sbjct: 209 IISLKFK---TMESDGILLHRAGPAGDHITLELRRGKLFLLINSGDARLTSSSTLINLTL 265
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF 149
G LDD WHSV + R+ V TVD F G+F L++ Y + GG +
Sbjct: 266 GSLLDDQHWHSVLIQRLGKQVNFTVDEHRRHFHA-QGEFNYLDLDYEISFGGISAPAKSV 324
Query: 150 LGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
+ GCL ++ YN +D + + S Q
Sbjct: 325 SLPYKHFHGCLENLFYNGVDVIGLVKEHSPQ 355
Score = 37.7 bits (86), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 10 DEALSNAATPTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES 69
D NAA+ S +H EL + F T S + + G D+ + L S
Sbjct: 790 DRPFWNAASFNTEASYLHFPTFHGELSADVSFFFKTTALS-GVFLENLGITDFIRIELRS 848
Query: 70 GR-LKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLP--G 126
+ ++G G E+S +D WH V V R +L VD + + P G
Sbjct: 849 PTTVTFSFDVGNGPFELSVHSPTHFNDNQWHHVRVERNMKEASLRVDELPPKIQAAPTDG 908
Query: 127 KFFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
L ++ LF+GG FLG I L+
Sbjct: 909 HVL-LQLNSQLFVGGTATRQRGFLGCIRSLQ 938
>sp|Q0V8T6|CTP5A_RAT Contactin-associated protein like 5-1 OS=Rattus norvegicus
GN=Cntnap5a PE=2 SV=1
Length = 1305
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTP-----R 89
+ISL F S + D +LF G + D+ L L+ GRL +++NL +S+
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHVTLELQKGRLALYLNLDDSKARLSSTVPLVIM 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ TVD+ +T + G+ L+I Y L GG G
Sbjct: 261 GSLLDDQHWHSVLLERVGKQANFTVDM-NTQHFQTKGETDALDIDYELSFGGIPVPSKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFVK------KNFHGCMENLYYNGVNIIDLAKRRKHQ 350
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 31 YHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES-GRLKVHINLGAGDTEISTPR 89
+H E + F T S + + G D+ L + S + I++G G E+
Sbjct: 807 FHAEFSADISFFFKTTALS-GVFLENLGIKDFLRLEMSSPSEVTFTIDVGNGPVELLVQS 865
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTF-EKLPGKFFELNIHYGLFIGGQGDFTEL 148
L+D WH + R +L VD + + E +F L++ LF+GG +
Sbjct: 866 PYPLNDNQWHYIRAERNVKETSLQVDNLPLSLREASEEAYFRLHLTSQLFVGGTSSRQKG 925
Query: 149 FLGHIEWLRGCLSDVIYN--NIDTLKRARARS 178
FL GC+ + N N D ++RA+ S
Sbjct: 926 FL-------GCMRSLHLNGQNTDLIERAKLMS 950
Score = 36.6 bits (83), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 64 LLRLESGRLKVHINLGAG-DTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
LL LE G L++ I AG TEI T GL +D LWHSV++ VTLT+D
Sbjct: 417 LLILEGGTLRLLIKKVAGHGTEIKTGSGL--NDGLWHSVSINARRNRVTLTLD 467
>sp|Q6P9K9|NRX3A_MOUSE Neurexin-3 OS=Mus musculus GN=Nrxn3 PE=1 SV=2
Length = 1571
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 28 ALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVH 75
A E + L +P+ SD I L L GK DY L L+ G + +
Sbjct: 259 ATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLV 318
Query: 76 INLGAGDTE-ISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
INLG+G E I P + +D WH V VTR VT++VD I TT + L
Sbjct: 319 INLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSD 378
Query: 135 YGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNID 169
++GG +L + GCL +V+Y N D
Sbjct: 379 DFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 414
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S D+ + L G + +LG G I L+D W
Sbjct: 895 LFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQW 954
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V +TR +N +L VD T ++ L++ L++ G QG ++ L +
Sbjct: 955 HNVVITRDSSNTHSLKVDTKVVT--QVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR 1012
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQ 180
+ +GCL+ V N D + A RS Q
Sbjct: 1013 DGFQGCLASVDLNGRLPDLINDALHRSGQ 1041
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
+ G D+ L +E G++ V N+G D I R ++D +H V TR N TL VD
Sbjct: 1137 APGLGDFLQLHIEQGKIGVVFNIGTVDISIKEER-TPVNDGKYHVVRFTRNGGNATLQVD 1195
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA 80
+Y K +M ++ T +++R+ +L + + LRLE GR+K+ +NL
Sbjct: 692 MYMKVIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDC 751
Query: 81 GDTEISTPRG-------LRLDDLLWHSVNVTRIEANVTLTVD 115
++ +G +L+D WH+V V R ++ LTVD
Sbjct: 752 IRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVD 793
>sp|Q9Y4C0|NRX3A_HUMAN Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4
Length = 1643
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Query: 28 ALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVH 75
A E + L +P+ SD I L L GK DY L L+ G + +
Sbjct: 259 ATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLV 318
Query: 76 INLGAGDTE-ISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
INLG+G E I P + +D WH V VTR VT++VD I TT + L
Sbjct: 319 INLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSD 378
Query: 135 YGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNID 169
++GG +L + GCL +V+Y N D
Sbjct: 379 DFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 414
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S D+ + L G + +LG G I L+D W
Sbjct: 895 LFFQFKTTSPDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQW 954
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V +TR +N +L VD T ++ L++ L++ G QG ++ L +
Sbjct: 955 HNVVITRDNSNTHSLKVDTKVVT--QVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR 1012
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQ 180
+ +GCL+ V N D + A RS Q
Sbjct: 1013 DGFQGCLASVDLNGRLPDLINDALHRSGQ 1041
Score = 37.0 bits (84), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
+ G D+ L +E G++ V N+G D I R ++D +H V TR N TL VD
Sbjct: 1137 APGLGDFLQLHIEQGKIGVVFNIGTVDISIKEER-TPVNDGKYHVVRFTRNGGNATLQVD 1195
Query: 116 LIHTTFEKLPGKFFEL-NIHYGLFIGGQGDFTELFLGHIEWL 156
G+ + N + IGG+ D LF G + L
Sbjct: 1196 NWPVNEHYPTGRQLTIFNTQAQIAIGGK-DKGRLFQGQLSGL 1236
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA 80
+Y K +M ++ T +++R+ +L + + LRLE GR+K+ +NL
Sbjct: 692 MYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDC 751
Query: 81 GDTEISTPRG-------LRLDDLLWHSVNVTRIEANVTLTVD 115
++ +G +L+D WH+V V R ++ LTVD
Sbjct: 752 IRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVD 793
>sp|Q0V8T8|CTP5B_MOUSE Contactin-associated protein like 5-2 OS=Mus musculus GN=Cntnap5b
PE=2 SV=1
Length = 1292
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEIS--TPR--- 89
+ISL F S + D +LF G + D+ L L++GRL +++NL +S TP
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQNGRLALYLNLDDSKARLSSITPSAIL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ TVD +T + G L+I Y L GG G
Sbjct: 261 GSLLDDQHWHSVLLERVGKQANFTVDR-NTQHFRTNGDTDALDIDYELSFGGIPVPSKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + +GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFLK------KNFQGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 64 LLRLESGRLKVHI-NLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE 122
LL LE G L++ I N+ TE T G L++ WHSVN+ VTLT+D +
Sbjct: 417 LLILEGGTLRLLIKNVAGHGTESLT--GRSLNNGQWHSVNINARRNRVTLTLDNDPAS-P 473
Query: 123 KLPGKFFELNIHYGLFIGGQGD--FTELFLGHIEWLRGCLSDVIYNN 167
L + ++ Y + GG D L I+ +GC+ + +N
Sbjct: 474 ALETPWLQIYSGYSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDN 520
>sp|Q0V8T3|CTP5D_RAT Contactin-associated protein like 5-4 OS=Rattus norvegicus
GN=Cntnap5d PE=2 SV=1
Length = 1305
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLR-- 92
+ISL F S + D +LF G + D+ L L+ GRL +++N+ +S L
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQKGRLALYLNIDGSKARLSIIAPLAIL 260
Query: 93 ---LDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
LDD WHSV + R+ TVD +T ++ G+ L+I Y L GG G
Sbjct: 261 GSLLDDQHWHSVLLERVGKQANFTVDR-NTQHFQIKGETDALDIDYELSFGGIPVPSKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ +V YN ++ + A+ R Q
Sbjct: 320 TFLK------KNFHGCIENVYYNGVNIIDLAKRRKHQ 350
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 12/173 (6%)
Query: 10 DEALSNAATPTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES 69
D NA + T S +H E + F T S + + G D+ L + S
Sbjct: 786 DRHFWNAVSFTTEASYLYFPTFHAEFSADISFFFKTTALS-GVFLENLGIKDFLRLEMSS 844
Query: 70 -GRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD-LIHTTFEKLPGK 127
+ I++G G E+ L+D WH + R +L VD L + E
Sbjct: 845 PSEITFTIDVGNGPVELLIQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQSMREASEEA 904
Query: 128 FFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYN--NIDTLKRARARS 178
+F L++ LF+GG + FL GC+ + N N D ++RA+ S
Sbjct: 905 YFRLHLTSQLFVGGTSSRQKGFL-------GCMRSLHLNGQNTDLIERAKLMS 950
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 64 LLRLESGRLKVHIN-LGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
LL L+ G L++ I + TEI T G L+D LWHSV++ VTLT+D
Sbjct: 417 LLILDGGSLRLLIKKVARHGTEIIT--GSSLNDGLWHSVSINARRNRVTLTLD 467
>sp|Q0V8T7|CTP5C_MOUSE Contactin-associated protein like 5-3 OS=Mus musculus GN=Cntnap5c
PE=2 SV=1
Length = 1305
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLR-- 92
+ISL F S + D +LF G + D+ L L++GRL +++NL ++S+ L
Sbjct: 204 VISLKFKS---IQRDGVLFHGEGQRGDHITLELQNGRLALYLNLDDSKAQVSSTAPLATL 260
Query: 93 ---LDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF 149
LDD WHSV + R+ TVD +T + G+ L+I Y L GG ++
Sbjct: 261 GSLLDDQHWHSVLLERVGKQANFTVDK-NTQHFQTKGETDALDIDYELSFGGIPVPSKPG 319
Query: 150 LGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
+ GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFLKKNFHGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 64 LLRLESGRLKVHIN-LGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE 122
LL LE G L++ I L TEI T GL +D +WHSV+++ VTLT+D
Sbjct: 417 LLILEGGTLRLLIKKLARHGTEIFTGSGL--NDGMWHSVSISARRNRVTLTLD---NDAA 471
Query: 123 KLPGKFFELNIHYG--LFIGGQGD--FTELFLGHIEWLRGCLSDVIYNN 167
LP L I+ G + GG D L I+ +GC+ + +N
Sbjct: 472 SLPPDTSWLQIYSGNSYYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDN 520
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 64 LLRLE---SGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD-LIHT 119
LRLE + I++G G ++ L+D WH + R +L VD L +
Sbjct: 837 FLRLEMSSPSEVIFAIDVGNGPIDLLVQSPYPLNDNQWHYIRAERNLKETSLQVDNLPQS 896
Query: 120 TFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARS 178
E F+ ++ LF+GG+ + F G I L + NID +RA+ S
Sbjct: 897 MREASEEGHFQFQLNSQLFVGGKSSRQKGFFGCIRSLH-----LNGQNIDLEERAKVTS 950
>sp|Q0V8T9|CTP5A_MOUSE Contactin-associated protein like 5-1 OS=Mus musculus GN=Cntnap5a
PE=2 SV=1
Length = 1304
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTPR----- 89
+ISL F S + D +LF G + D+ L L+ GRL +++NL +S+
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQKGRLALYLNLDDSKARLSSTVPLVIL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF 149
G LDD WHSV + R+ TVD+ +T + G L+I Y L GG ++
Sbjct: 261 GSLLDDQHWHSVLLERVGKQANFTVDM-NTQHFRTKGDTDSLDIDYELSFGGIPVPSKPG 319
Query: 150 LGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
+ GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFLKKNFHGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 62/152 (40%), Gaps = 12/152 (7%)
Query: 31 YHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLES-GRLKVHINLGAGDTEISTPR 89
+H E + F T S + + G D+ L + S + I++G G E+
Sbjct: 807 FHTEFSADISFFFKTTALS-GVFLENLGIKDFFRLEMSSPSEVTFAIDVGNGPIELLVQS 865
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVD-LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL 148
L+D WH + +L VD L + E G F L ++ LF+GG +
Sbjct: 866 PYPLNDNQWHYIRAETNLKETSLQVDNLPQSMREASEGGHFRLQLNSQLFVGGTSSRQKG 925
Query: 149 FLGHIEWLRGCLSDVIYNN--IDTLKRARARS 178
FL GC+ ++ N +D +RA+ S
Sbjct: 926 FL-------GCIRSLLLNGHKVDLEERAKVTS 950
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 64 LLRLESGRLKVHIN-LGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
LL LE G L++ I + TEI T GL +D LWHSV++ VTLT+D
Sbjct: 417 LLILEGGTLRLLIKKVARHGTEILTGSGL--NDGLWHSVSINARRNRVTLTLD 467
>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus
GN=Cntnap5b PE=2 SV=1
Length = 1292
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 36 MISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEIS--TPR--- 89
+ISL F S + D +LF G + D+ L L++GRL +++NL +S TP
Sbjct: 204 VISLKFKS---MQGDGVLFHGEGQRGDHITLELQNGRLVLYLNLDDKKAWLSSITPSAIL 260
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG------QG 143
G LDD WHSV + R+ V TVD +T G+ L+I Y L GG G
Sbjct: 261 GSLLDDQHWHSVFLERVGKQVNFTVDR-NTQHFWTKGETEVLDIDYELSFGGIPVPSKPG 319
Query: 144 DFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
F + + GC+ ++ YN ++ + A+ R Q
Sbjct: 320 TFVK------KNFHGCIENLYYNGVNIIDLAKRRKHQ 350
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 64 LLRLESGRLKVHINLGAG-DTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE 122
LL LESG L++ I G TE T G L+D WHSV++ VTLTVD
Sbjct: 417 LLILESGTLRLLIKKVTGHGTESLT--GRSLNDGRWHSVSINVRRNRVTLTVD---NDAV 471
Query: 123 KLPGKFFELNIHYG--LFIGGQGD--FTELFLGHIEWLRGCLSDVIYNN 167
L + L I+ G + GG D L I+ +GC+ + +N
Sbjct: 472 SLAPETSGLQIYSGNSYYFGGCPDNLTVSQCLNPIKAFQGCMRLIFIDN 520
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 36 MISLLFTSPLTKRSDAILFLSAGKI-DYCLLRLESGRLKVHINLGAG-----DTEISTPR 89
+ISL F T +SD IL G D+ L+L RL + IN G T ++
Sbjct: 207 IISLKFK---TMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG-QGDFTEL 148
G LDD WHSV + R+ V TVD F G+F +N+ Y + GG +
Sbjct: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHAR-GEFNLMNLDYEISFGGIPAPGKSV 322
Query: 149 FLGHIEWLRGCLSDVIYNNIDTLKRARARSSQADAQG 185
H + GCL ++ YN +D + A+ + Q A G
Sbjct: 323 SFPHRNF-HGCLENLYYNGVDIIDLAKQQKPQIIAMG 358
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 7/131 (5%)
Query: 31 YHKELM--ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRL-KVHINLGAGDTEIST 87
+H EL +S F T S + + G D+ + L S + ++G G EIS
Sbjct: 809 FHGELSADVSFFFK---TTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISV 865
Query: 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGK-FFELNIHYGLFIGGQGDFT 146
+D WH V V R +L VD + + P L ++ LF+GG
Sbjct: 866 QSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQ 925
Query: 147 ELFLGHIEWLR 157
FLG I L+
Sbjct: 926 RGFLGCIRSLQ 936
>sp|Q07310|NRX3A_RAT Neurexin-3 OS=Rattus norvegicus GN=Nrxn3 PE=1 SV=1
Length = 1578
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 53 LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-ISTPRGLRLDDLLWHSVNVTRIEANV 110
L L GK DY L L+ G + + INLG+G E I P + +D WH V VTR V
Sbjct: 299 LILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQV 358
Query: 111 TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNID 169
T++VD I TT + L ++G +L + GCL +V+Y N D
Sbjct: 359 TISVDGILTTTGYTQEDYTMLGSDDSSYVGPSPSTADLPGSPVSNNFMGCLKEVVYKNND 418
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S ++ + L G + +LG G I L+D W
Sbjct: 899 LFFQFKTTSADGFILFNSGDGNNFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQW 958
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V +TR +N +L VD T ++ L++ L++ G QG ++ L +
Sbjct: 959 HNVVITRDNSNTHSLKVDTKVVT--QVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASR 1016
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQAD 182
+ +GCL+ V N D + A RS Q D
Sbjct: 1017 DGFQGCLASVDLNGRLPDLINDALHRSGQID 1047
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
+ G D+ L +E G++ V N+G D I R ++D +H V TR AN TL VD
Sbjct: 1141 APGLGDFLQLHIEQGKIGVVFNIGTVDISIKEER-TPVNDGKYHVVRFTRNGANATLQVD 1199
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA 80
+Y K +M ++ T +++R+ +L + + LRLE GR+K+ +NL
Sbjct: 696 MYMKVIMPMVMHTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDC 755
Query: 81 GDTEISTPRG-------LRLDDLLWHSVNVTRIEANVTLTVD 115
++ +G +L+D WH+V V R ++ LTVD
Sbjct: 756 IRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVD 797
>sp|Q9ULB1|NRX1A_HUMAN Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1
Length = 1477
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 71/169 (42%), Gaps = 22/169 (13%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 296 LSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 355
Query: 87 TPRGLRLDDLLWHSVNVTRI--------EANVTLTVDLIHTTFEKLPGKFFELNIHYGLF 138
P + +D WH V VTR A VT++VD I TT + L +
Sbjct: 356 EPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFY 415
Query: 139 IGGQGDFTELFLGHIE-WLRGCLSDVIYNNIDTLKRARARSSQADAQGK 186
+GG +L + GCL +V+Y N D + Q D + K
Sbjct: 416 VGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMK 464
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ S D+ ++ L G L +LG G I L+D W
Sbjct: 929 LFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 988
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI---- 153
H+V ++R +N+ T+ +D TT ++ L++ L+IGG T L +
Sbjct: 989 HNVMISRDTSNLHTVKIDTKITT--QITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1046
Query: 154 EWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 1047 EGFQGCLASVDLN 1059
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 52/123 (42%), Gaps = 16/123 (13%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
S+G DY L + G++ V N+G D I + ++D +H V TR N TL VD
Sbjct: 1171 SSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAI-INDGKYHVVRFTRSGGNATLQVD 1229
Query: 116 LIHTTFEKLPG--KFFELNIHYGLFIGG--QGDFTELFLGHIEWLRGCLSDVIYNNIDTL 171
E+ P + N + IGG QG + +G LS + YN + L
Sbjct: 1230 -SWPVIERYPAGRQLTIFNSQATIIIGGKEQG----------QPFQGQLSGLYYNGLKVL 1278
Query: 172 KRA 174
A
Sbjct: 1279 NMA 1281
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRL-ESGRLKVHIN 77
P ++ CE + + + + R + F G D+ L L GRL++ +
Sbjct: 44 PKWNACCESEMSFQLKTR---------SARGLVLYFDDEGFCDFLELILTRGGRLQLSFS 94
Query: 78 LGAGDTEI---STPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
+ + TP ++D WHSV + R N TL +D + + ++ K ++ +
Sbjct: 95 IFCAEPATLLADTP----VNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVF 150
Query: 135 YGLFIGG 141
GLF+GG
Sbjct: 151 SGLFVGG 157
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGAGDTEISTPRG---- 90
+SL F S +R+ IL + + LRLE +GR+K+ +NL ++ +G
Sbjct: 742 VSLRFRS---QRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETL 798
Query: 91 ---LRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ LTVD ++ G L H
Sbjct: 799 FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH 845
Score = 31.6 bits (70), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGL--RLDDLLWHSVNVTRIEANVTLTVDL 116
K+D+ + + G L + +++G+G +I + L +++D W+ V+ R + T++V+
Sbjct: 537 KVDFFAIEMLDGHLYLLLDMGSGTIKI---KALLKKVNDGEWYHVDFQRDGRSGTISVNT 593
Query: 117 IHTTFEKLPGKFFELNIHYGLFIGG 141
+ T + PG+ L++ L++GG
Sbjct: 594 LRTPYTA-PGESEILDLDDELYLGG 617
>sp|Q94887|NRX4_DROME Neurexin-4 OS=Drosophila melanogaster GN=Nrx-IV PE=1 SV=2
Length = 1284
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 71/128 (55%), Gaps = 4/128 (3%)
Query: 46 TKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVT 104
T ++ ++ S G + DY L+L+ ++ ++++LG+ S G LDD +WH V ++
Sbjct: 222 TAFANGVMMYSRGTQGDYYALQLKDNKMVLNLDLGS-RVMTSLSVGSLLDDNVWHDVVIS 280
Query: 105 RIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVI 164
R + ++ +VD + ++ G+F LN++ L++GG + E + + GCL ++
Sbjct: 281 RNQRDIIFSVDRV-IVRGRIQGEFTRLNLNRELYLGGVPNVQEGLIVQ-QNFSGCLENIY 338
Query: 165 YNNIDTLK 172
+N+ + ++
Sbjct: 339 FNSTNFIR 346
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 46 TKRSDAILFLSAGKIDYCLLRLESG-RLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVT 104
T + ++++F + G DY L L G +L+ G+G ++ L+D WH+V+V
Sbjct: 826 TTQENSVIFHATGPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHLNDNNWHTVSVE 885
Query: 105 RIEANVTLTVD-LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWL 156
R L VD I + PG L++ L IG ++ + ++G I L
Sbjct: 886 RNRKEARLVVDGSIKAEVREPPGPVRALHLTSDLVIGATTEYRDGYVGCIRAL 938
>sp|Q9CS84|NRX1A_MOUSE Neurexin-1 OS=Mus musculus GN=Nrxn1 PE=1 SV=3
Length = 1514
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 296 LSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 355
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH V VTR + +VT++VD I TT + L
Sbjct: 356 EPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTML 415
Query: 132 NIHYGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNIDTLKRARARSSQADAQGK 186
++GG +L + GCL +V+Y N D + Q D + K
Sbjct: 416 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMK 471
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ S D+ ++ L G L +LG G I L+D W
Sbjct: 936 LFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 995
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI---- 153
H+V ++R +N+ T+ +D TT ++ L++ L+IGG T L +
Sbjct: 996 HNVMISRDTSNLHTVKIDTKITT--QITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1053
Query: 154 EWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 1054 EGFQGCLASVDLN 1066
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
S+G DY L + G++ V N+G D I + ++D +H V TR N TL VD
Sbjct: 1178 SSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAI-INDGKYHVVRFTRSGGNATLQVD 1236
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGAGDTEISTPRG---- 90
+SL F S +R+ IL + + LRLE +GR+K+ +NL ++ +G
Sbjct: 749 VSLRFRS---QRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETL 805
Query: 91 ---LRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ LTVD ++ G L H
Sbjct: 806 FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH 852
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRL-ESGRLKVHIN 77
P ++ CE + + + + R + F G D+ L L GRL++ +
Sbjct: 44 PKWNACCESEMSFQLKTR---------SARGLVLYFDDEGFCDFLELILTRGGRLQLSFS 94
Query: 78 LGAGDTEI---STPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
+ + TP ++D WHSV + R N TL +D + ++ K ++ +
Sbjct: 95 IFCAEPATLLADTP----VNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVF 150
Query: 135 YGLFIGG 141
GLF+GG
Sbjct: 151 SGLFVGG 157
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
K+D+ + + G L + +++G+G +I + +++D W+ V+ R + T++V+ +
Sbjct: 544 KVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ-KKVNDGEWYHVDFQRDGRSGTISVNTLR 602
Query: 119 TTFEKLPGKFFELNIHYGLFIGG 141
T + PG+ L++ L++GG
Sbjct: 603 TPYTA-PGESEILDLDDELYLGG 624
>sp|Q63372|NRX1A_RAT Neurexin-1 OS=Rattus norvegicus GN=Nrxn1 PE=1 SV=3
Length = 1530
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 312 LSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 371
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH V VTR + +VT++VD I TT + L
Sbjct: 372 EPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTML 431
Query: 132 NIHYGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNIDTLKRARARSSQADAQGK 186
++GG +L + GCL +V+Y N D + Q D + K
Sbjct: 432 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMK 487
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ S D+ ++ L G L +LG G I L+D W
Sbjct: 952 LFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 1011
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI---- 153
H+V ++R +N+ T+ +D TT ++ L++ L+IGG T L +
Sbjct: 1012 HNVMISRDTSNLHTVKIDTKITT--QITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1069
Query: 154 EWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 1070 EGFQGCLASVDLN 1082
Score = 36.6 bits (83), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
S+G DY L + G++ V N+G D I + ++D +H V TR N TL VD
Sbjct: 1194 SSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAI-INDGKYHVVRFTRSGGNATLQVD 1252
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGAGDTEISTPRG---- 90
+SL F S +R+ IL + + LRLE +GR+K+ +NL ++ +G
Sbjct: 765 VSLRFRS---QRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETL 821
Query: 91 ---LRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ LTVD ++ G L H
Sbjct: 822 FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH 868
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 17/127 (13%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRL-ESGRLKVHIN 77
P ++ CE + + + + R + F G D+ L L GRL++ +
Sbjct: 44 PKWNACCESEMSFQLKTR---------SARGLVLYFDDEGFCDFLELILTRGGRLQLSFS 94
Query: 78 LGAGDTEI---STPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
+ + TP ++D WHSV + R N TL +D + ++ K ++ +
Sbjct: 95 IFCAEPATLLADTP----VNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVF 150
Query: 135 YGLFIGG 141
GLF+GG
Sbjct: 151 SGLFVGG 157
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
K+D+ + + G L + +++G+G +I + +++D W+ V+ R + T++V+ +
Sbjct: 560 KVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ-KKVNDGEWYHVDFQRDGRSGTISVNTLR 618
Query: 119 TTFEKLPGKFFELNIHYGLFIGG 141
T + PG+ L++ L++GG
Sbjct: 619 TPY-TAPGESEILDLDDELYLGG 640
>sp|Q9DDD0|NRX1A_CHICK Neurexin-1 (Fragment) OS=Gallus gallus GN=NRXN1 PE=2 SV=1
Length = 1363
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 145 LSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 204
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH V VTR + +VT++VD I TT + L
Sbjct: 205 EPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTML 264
Query: 132 NIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNIDTLKRARARSSQADAQGK 186
++GG +L + GCL +V+Y N D + Q D + K
Sbjct: 265 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMK 320
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 59/135 (43%), Gaps = 11/135 (8%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ S D+ ++ L G L +LG G I L+D W
Sbjct: 785 LFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 844
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-----LGH 152
H+V ++R N+ T+ +D TT + L++ L+IGG E++ L H
Sbjct: 845 HNVMISRDTNNLHTVKIDTKITTQSTAGAR--NLDLKSDLYIGGVA--KEMYKSLPKLVH 900
Query: 153 I-EWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 901 AKEGFQGCLASVDLN 915
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGAGDTEISTPRG---- 90
+SL F S +R+ IL + + LRLE +GR+K+ +NL ++ +G
Sbjct: 598 VSLRFRS---QRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETL 654
Query: 91 ---LRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ L VD ++ G L H
Sbjct: 655 FAGYNLNDNEWHTVRVVRRGKSLKLMVDDQQAMTGQMAGDHTRLEFH 701
Score = 30.4 bits (67), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
S G DY L + G++ V N+G D I + D +H V TR N TL VD
Sbjct: 1027 STGLGDYLELHIHQGKIGVKFNVGTDDIAIEEINAIINDG-KYHVVRFTRSGGNATLQVD 1085
>sp|Q28146|NRX1A_BOVIN Neurexin-1 OS=Bos taurus GN=NRXN1 PE=1 SV=1
Length = 1530
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 72/176 (40%), Gaps = 29/176 (16%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 312 LSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 371
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH V VTR + +VT++VD I TT + L
Sbjct: 372 EPVNGKFNDNAWHDVKVTRNLRQTSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTML 431
Query: 132 NIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNIDTLKRARARSSQADAQGK 186
++GG +L + GCL +V+Y N D + Q D + K
Sbjct: 432 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMK 487
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ S D+ ++ L G L +LG G I L+D W
Sbjct: 952 LFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQW 1011
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI---- 153
H+V ++R +N+ T+ +D TT ++ L++ L+IGG T L +
Sbjct: 1012 HNVMISRDTSNLHTVKIDTKITT--QITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAK 1069
Query: 154 EWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 1070 EGFQGCLASVDLN 1082
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
S+G DY L + G++ V N+G D I + ++D +H V TR N TL VD
Sbjct: 1194 SSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAI-INDGKYHVVRFTRSGGNATLQVD 1252
Score = 35.8 bits (81), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 17/127 (13%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRL-ESGRLKVHIN 77
P ++ CE + + + + R + F G D+ L L GRL++ +
Sbjct: 44 PKWNACCESEMSFQLKTR---------SARGLVLYFDDEGFCDFLELILTRGGRLQLSFS 94
Query: 78 LGAGDTEI---STPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
+ + TP ++D WH+V + R N TL +D + + ++ K ++ +
Sbjct: 95 IFCAEPATLLTDTP----VNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVF 150
Query: 135 YGLFIGG 141
GLF+GG
Sbjct: 151 SGLFVGG 157
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGAGDTEISTPRG---- 90
+SL F S +R+ IL + + LRLE +GR+K+ +NL ++ +G
Sbjct: 765 VSLRFRS---QRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETL 821
Query: 91 ---LRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ LTVD ++ G L H
Sbjct: 822 FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH 868
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
K+D+ + + G L + +++G+G +I + +++D W+ V+ R + T++V+ +
Sbjct: 560 KVDFFAIEMLDGHLYLLLDMGSGTIKIKALQ-KKVNDGEWYHVDFQRDGRSGTISVNTLR 618
Query: 119 TTFEKLPGKFFELNIHYGLFIGG 141
T + PG+ L++ L++GG
Sbjct: 619 TPYTA-PGESQILDLDDELYLGG 640
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 33 KELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLR 92
K ISL F LT +LF D+ L L G +K+ ++LG+G + T
Sbjct: 2918 KATKISLSF---LTFSPHGLLFFVGKDKDFMALELSDGGVKLSVDLGSGVGQWITESS-N 2973
Query: 93 LDDLLWHSVNVTRIEANVTLTVDLIHTTFE-KLPGKFFELNIHYGLFIGGQGDFTELFLG 151
+D WH+V++ R E +V + +D E +PGK E+++ L+IGG +
Sbjct: 2974 YNDGKWHTVSIVREEKHVKIMIDGETEVLEGDVPGKDSEMSVTEFLYIGGTPSGLSVRTT 3033
Query: 152 HIEWLRGCLSDV 163
+ LRGC+ V
Sbjct: 3034 IVP-LRGCIKSV 3044
Score = 33.5 bits (75), Expect = 0.93, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 61 DYCLLRLESGRLKVHINLGAGDT--EISTPRGLRLDDLLWHSVNVTRIEANVTLTV 114
DY +E GR K+ ++LG ++ TP ++D LW +N+ RI V++T+
Sbjct: 2751 DYVAAEIEYGRPKITVDLGDAPAVVKLDTP----VNDGLWRRLNIERIGKTVSVTL 2802
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 41 FTSPLTKRSD-AILFLSAGK-IDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
FT + SD I+F++ K D+ + LE GR+ + G+G I + + + D W
Sbjct: 3336 FTFKIRPTSDNGIIFIATNKRTDHIAVMLEHGRVVFTYDTGSGQVIIKSDKSII--DGRW 3393
Query: 99 HSVNVTRIEANVTLTVD 115
H++ V+R + L VD
Sbjct: 3394 HTIKVSRRGKSAHLIVD 3410
>sp|A1XQX2|NR1BA_DANRE Neurexin-1b OS=Danio rerio GN=nrxn1b PE=2 SV=1
Length = 1470
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 43 SPLTKRSDAI-----------LFLSAGKI-DYCLLRLESGRLKVHINLGAGDTE-ISTPR 89
+P+ SD I L L GKI DY L L++G + + INLG+G E + P
Sbjct: 267 NPIQSSSDEITLSFRTLQRNGLMLHTGKIADYVNLALKNGAVSLVINLGSGAFEALVEPV 326
Query: 90 GLRLDDLLWHSVNVTRI--------EANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG 141
+ +D WH V V R A VT++VD I TT ++ L L++GG
Sbjct: 327 NGKFNDNEWHDVKVLRNLRQHSGVGYAMVTISVDGILTTTGYTQEEYTMLGSDDFLYVGG 386
Query: 142 QGDFTELFLGHIE-WLRGCLSDVIYNNIDTLKRARARSSQADAQ 184
+L + GCL +V+Y N D + Q D +
Sbjct: 387 SPSTADLPGSPVSNNFMGCLREVVYKNNDAELELSRLAYQGDPK 430
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 65 LRLESGRLKVHINLGAGDTEISTPRGLR-------LDDLLWHSVNVTRIEANVTLTVDLI 117
L LE+GR+++ +NL +T +G L+D WH+V V R ++ L+VD +
Sbjct: 738 LELEAGRVRLTVNLDCNRINCTTSKGPESLFAGQNLNDDEWHTVRVIRRGKSLKLSVDDL 797
Query: 118 HTTFEKLPGKFFEL---NIHYGLFIGGQ--GDFTELFLGHIEWL 156
T ++PG +L NI G+ G + F+GH++ L
Sbjct: 798 PTVDGEIPGDHTQLEFHNIETGIITGKRQLPTMPSNFIGHLQSL 841
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 52 ILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVT 111
+ F G D+ L + G+L++ ++ ++ + ++D WHSV++ R N T
Sbjct: 63 VYFDDEGFCDFLELHVHVGKLRLCFSIFCAESTCVL-SDVAINDNRWHSVSIMRNFRNTT 121
Query: 112 LTVDLIHTTFEKLPGKFFELNIHYGLFIGG 141
L VD +E++ K ++ + LF+GG
Sbjct: 122 LIVD-DEVKWEEVKSKRRDMTVFSHLFLGG 150
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
SAG DY L + G + N+G D I G ++D +H V +TR N TL VD
Sbjct: 1140 SAGLGDYLKLHIVKGNVVAVFNVGTYDINIEE-NGKLVNDGNYHIVRLTRSGGNATLQVD 1198
Query: 116 LIHTTFEKLP 125
+ E+ P
Sbjct: 1199 DL-PVIERFP 1207
>sp|Q9CPW0|CNTP2_MOUSE Contactin-associated protein-like 2 OS=Mus musculus GN=Cntnap2 PE=1
SV=2
Length = 1332
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 14/150 (9%)
Query: 36 MISLLFTSPLTKRSDAILFLSAGKI-DYCLLRLESGRLKVHINLGA-------GDTEIST 87
+I+L F T S+ +L G+ DY L L+ +L + +NLG+ G T +++
Sbjct: 211 VIALKFK---TSESEGVLLHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVTS 267
Query: 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE 147
G LDD WHSV + R ++ LT+D F + G+F L++ Y + GG +
Sbjct: 268 --GSLLDDHHWHSVLIERQGRSINLTLDRSMQHF-RTNGEFDYLDLDYEITFGGIPFSGK 324
Query: 148 LFLGHIEWLRGCLSDVIYNNIDTLKRARAR 177
+ + +GC+ + YN ++ AR +
Sbjct: 325 PSSSNRKNFKGCMESINYNGVNITDLARRK 354
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 6/123 (4%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESG-RLKVHINLGAGDTEISTPRGLRLDD 95
IS F + + + + + G D+ L L+S + ++G G EI L+D
Sbjct: 823 ISFYFKTLIPR---GVFLENLGNTDFIKLELKSATEVSFSFDVGNGPVEIVVRSPSPLND 879
Query: 96 LLWHSVNVTRIEANVTLTVDLIHTTFEKLPGK-FFELNIHYGLFIGGQGDFTELFLGHIE 154
WH V R +L VD + K P + L ++ LF+GG G + FLG I
Sbjct: 880 DQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGGAGG-QQGFLGCIR 938
Query: 155 WLR 157
LR
Sbjct: 939 SLR 941
Score = 37.7 bits (86), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 10/152 (6%)
Query: 41 FTSPLTKRSDAILFLSAGKIDY-CLLRLESGRLKVHINLGAGDTEISTPRGLR-LDDLLW 98
F+ TK +L++S+ D+ +L +G L++ NLG + R + +
Sbjct: 1054 FSFSTTKAPCILLYVSSLTTDFLAVLVKPTGNLQIRYNLGGTREPFNIDVDHRNMANGQP 1113
Query: 99 HSVNVTRIEANVTLTVDLIHTTFEKLPGKFFEL-NIHYGLFIG-----GQGDFTELFLGH 152
HSVN+TR E + L +D LP L N LF+G G+ D E+ +
Sbjct: 1114 HSVNITRHERTIILKLDHYPAVGYHLPSSSDTLFNSPKSLFLGKVIETGKID-QEIHKYN 1172
Query: 153 IEWLRGCLSDVIYNNIDTLKRARARSSQADAQ 184
GCLS V +N+I LK A R + A A
Sbjct: 1173 TPGFTGCLSRVQFNHIAPLK-AALRQTNASAH 1203
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L++G + + INLG+G E +
Sbjct: 276 LSPNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALV 335
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH V VTR + +VT++VD I TT + L
Sbjct: 336 EPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTML 395
Query: 132 NIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNID 169
++GG +L + GCL +V+Y N D
Sbjct: 396 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 434
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 46 TKRSDAILF---LSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVN 102
T++ DA+L S+G DY L++E G +KV N+G D I ++D +H V
Sbjct: 1147 TQQKDAVLVRVDSSSGLGDYLQLQIERGNIKVVFNVGTDDINIEETSKF-VNDGKYHIVR 1205
Query: 103 VTRIEANVTLTVDLIHTTFEKLP 125
TR N TL VD + E+ P
Sbjct: 1206 FTRSGGNATLQVDDL-PVIERYP 1227
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 37 ISLLFTSPLTKRSDAILFL--SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLR-- 92
+SL F S +R+ +L S D L L+ GR+++ +NL +T +G
Sbjct: 731 VSLRFRS---QRAYGVLMATTSQNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI 787
Query: 93 -----LDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
L+D WH+V V R ++ L VD + + ++ G +L H
Sbjct: 788 FSGQNLNDNEWHTVRVVRRGKSLKLMVDDLQPSEGQITGDHTQLEFH 834
Score = 35.0 bits (79), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 57/134 (42%), Gaps = 9/134 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T IL+ D+ ++ L G L +LG G I L+D W
Sbjct: 918 LFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGNSNTPLNDNHW 977
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQG-----DFTELFLGH 152
H+V ++R N+ T+ +D TT + K L++ L++GG D +L
Sbjct: 978 HNVMISRDTNNLHTVKIDTKITTQTTMGAK--NLDLKGDLYVGGVAKDMYKDLPKLVHSK 1035
Query: 153 IEWLRGCLSDVIYN 166
E +GCL+ V N
Sbjct: 1036 -EGFQGCLASVDLN 1048
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
K+D+ + + G L + +++G+G T+ +++D W+ V+ R + T++V+ I
Sbjct: 526 KVDFFAIEMLDGHLYLLLDMGSGTTKTRA-VNKKVNDGEWYHVDFQRDGRSGTISVNSIR 584
Query: 119 TTFEKLPGKFFELNIHYGLFIGG 141
T + PG+ L++ L++GG
Sbjct: 585 TPYNA-PGESEILDLDDKLYLGG 606
>sp|Q9P2S2|NRX2A_HUMAN Neurexin-2 OS=Homo sapiens GN=NRXN2 PE=2 SV=1
Length = 1712
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 29/180 (16%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLR 66
PT K A E L +P+ +D I L L GK DY L
Sbjct: 281 PTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLS 340
Query: 67 LESGRLKVHINLGAGDTE-ISTPRGLRLDDLLWHSVNVTR---------------IEANV 110
L+SG + + INLG+G E + P + +D WH V VTR + V
Sbjct: 341 LKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLV 400
Query: 111 TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNID 169
T++VD I TT + L +IGG + +L + GCL DV+Y N D
Sbjct: 401 TISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNND 460
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T +LF S D+ ++ L G + +LG G + + ++D W
Sbjct: 942 LFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQW 1001
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V V+R NV TL +D T + L++ L+IGG + F+ L +
Sbjct: 1002 HNVVVSRDPGNVHTLKID--SRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASR 1059
Query: 154 EWLRGCLSDVIYN 166
+ +GCL+ V N
Sbjct: 1060 DGFQGCLASVDLN 1072
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
++G DY L ++ G + V N+G D I P + + D +H V TR N TL VD
Sbjct: 1184 ASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEPNAI-VSDGKYHVVRFTRSGGNATLQVD 1242
Query: 116 LIHTTFEKLPGKFFE 130
E+ P F+
Sbjct: 1243 SWPVN-ERYPAGNFD 1256
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA---GDTEISTPR-- 89
+SL F +++R+ ++ + + LRLE G++K+ +NL G P
Sbjct: 756 VSLRF---MSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETL 812
Query: 90 --GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
G +L+D WH+V V R ++ L+VD + T ++ G L H
Sbjct: 813 FAGHKLNDNEWHTVRVVRRGKSLQLSVDNV-TVEGQMAGAHMRLEFH 858
>sp|Q63374|NRX2A_RAT Neurexin-2 OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=3
Length = 1715
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 72/180 (40%), Gaps = 29/180 (16%)
Query: 19 PTFHKSCEKALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLR 66
PT K A E L +P+ +D I L L GK DY L
Sbjct: 281 PTKGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLS 340
Query: 67 LESGRLKVHINLGAGDTE-ISTPRGLRLDDLLWHSVNVTR---------------IEANV 110
L+SG + + INLG+G E + P + +D WH V VTR + V
Sbjct: 341 LKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLV 400
Query: 111 TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNID 169
T++VD I TT + L +IGG + +L + GCL DV+Y N D
Sbjct: 401 TISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGCLKDVVYKNND 460
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
++G DY L ++ G + V N+G D I P + + D +H V TR N TL VD
Sbjct: 1187 ASGLGDYLQLHIDQGTVGVIFNVGTDDITIDEPNAI-VSDGKYHVVRFTRSGGNATLQVD 1245
Query: 116 LIHTTFEKLPGKFFE 130
E+ P F+
Sbjct: 1246 SWPVN-ERYPAGNFD 1259
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T +LF S D+ ++ L G + +LG G + + ++D W
Sbjct: 945 LFFQFKTTAPDGLLLFNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKPVNDNQW 1004
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V V+R NV TL +D T + L++ L+IGG + F+ L +
Sbjct: 1005 HNVVVSRDPGNVHTLKID--SRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASR 1062
Query: 154 EWLRGCLSDVIYN 166
+ +GCL+ V N
Sbjct: 1063 DGFQGCLASVDLN 1075
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 37 ISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINL----------GAGDTE 84
+SL F +++R+ ++ + + LRLE G++K+ +NL AG
Sbjct: 756 VSLRF---MSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSAAGKGP 812
Query: 85 ISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIH 134
+ G +L+D WH+V V R ++ L+VD + T ++ G L H
Sbjct: 813 ETLFAGHKLNDNEWHTVRVVRRGKSLQLSVDNV-TVEGQMAGAHTRLEFH 861
>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1
SV=1
Length = 1331
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 11/140 (7%)
Query: 46 TKRSDAILFLSAGKI-DYCLLRLESGRLKVHINLGA-------GDTEISTPRGLRLDDLL 97
T S+ ++ G+ DY L L+ +L + +NLG+ G T + T G LDD
Sbjct: 218 TSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMT--GSLLDDHH 275
Query: 98 WHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
WHSV + R ++ LT+D F + G+F L++ Y + GG + + +
Sbjct: 276 WHSVVIERQGRSINLTLDRSMQHF-RTNGEFDYLDLDYEITFGGIPFSGKPSSSSRKNFK 334
Query: 158 GCLSDVIYNNIDTLKRARAR 177
GC+ + YN ++ AR +
Sbjct: 335 GCMESINYNGVNITDLARRK 354
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 51 AILFLSAGKIDYCLLRLESG-RLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEAN 109
+ + GK D+ L L+S + ++G G EI L+D WH V R
Sbjct: 834 GVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVRSPTPLNDDQWHRVTAERNVKQ 893
Query: 110 VTLTVDLIHTTFEKLPGK-FFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
+L VD + K P + L ++ LF+GG G + FLG I LR
Sbjct: 894 ASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGGAGG-QQGFLGCIRSLR 941
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 41 FTSPLTKRSDAILFLSAGKIDY-CLLRLESGRLKVHINLGAGDTEISTPRGLRLD----- 94
F+ TK +L++S+ D+ +L +G L++ NLG P + +D
Sbjct: 1053 FSFSTTKAPCILLYISSFTTDFLAVLVKPTGSLQIRYNLGG----TREPYNIDVDHRNMA 1108
Query: 95 DLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFEL-NIHYGLFIG-----GQGDFTEL 148
+ HSVN+TR E + L +D + LP L N LF+G G+ D E+
Sbjct: 1109 NGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKID-QEI 1167
Query: 149 FLGHIEWLRGCLSDVIYNNIDTLKRARARSSQADAQ 184
+ GCLS V +N I LK A R + A A
Sbjct: 1168 HKYNTPGFTGCLSRVQFNQIAPLK-AALRQTNASAH 1202
>sp|D0PRN3|NRX3A_CHICK Neurexin-3 OS=Gallus gallus PE=1 SV=1
Length = 1693
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 29/171 (16%)
Query: 28 ALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVH 75
A E + L +P+ SD I L L GK DY L L+ G + +
Sbjct: 263 ATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLV 322
Query: 76 INLGAGDTE-ISTPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHT 119
INLG+G E I P + +D WH V VTR + VT++VD I T
Sbjct: 323 INLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILT 382
Query: 120 TFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNID 169
T + L ++GG +L + GCL +V+Y N D
Sbjct: 383 TTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 433
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 9/149 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S D+ + L G + +LG G I L+D W
Sbjct: 914 LFFQFKTTSADGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQW 973
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGG--QGDFTEL--FLGHI 153
H+V +TR +N +L VD T ++ L++ L+I G QG ++ L +
Sbjct: 974 HNVVITRDNSNTHSLKVDTKMVT--QVINGAKNLDLKGDLYIAGLAQGMYSNLPKLVASR 1031
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQ 180
+ +GCL+ V N D + A RS Q
Sbjct: 1032 DGFQGCLASVDLNGRLPDLINDALHRSGQ 1060
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEI---STPRGLRLDDLLWHSVNVTRIEANVTL 112
+ G D+ L +E G++ V N+G D I STP ++D +H V TR N TL
Sbjct: 1156 APGLGDFLQLHIEQGKIGVVFNIGTVDISIKEESTP----VNDGKYHVVRFTRNGGNATL 1211
Query: 113 TVD 115
VD
Sbjct: 1212 QVD 1214
Score = 30.4 bits (67), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLK------- 73
+Y K +M ++ T +++R+ +L + + LRLE GR+K
Sbjct: 711 MYMKIIMPMVMHTEAEDVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDC 770
Query: 74 VHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
+ IN A + G +L+D WH+V V R ++ L VD
Sbjct: 771 IRINCNASKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLMVD 812
>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo abelii GN=CNTNAP2 PE=2
SV=1
Length = 1331
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 36 MISLLFTSPLTKRSDAILFLSAGKI-DYCLLRLESGRLKVHINLGA-------GDTEIST 87
+I+L F T S+ ++ G+ DY L L+ +L + +NLG+ G T + T
Sbjct: 211 VIALKFK---TSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMT 267
Query: 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE 147
G LDD WHSV + R ++ LT+D F + G+F L++ Y + GG +
Sbjct: 268 --GSLLDDHHWHSVIIERQGRSINLTLDRSMQHF-RTNGEFDYLDLDYEITFGGIPFSGK 324
Query: 148 LFLGHIEWLRGCLSDVIYNNIDTLKRARAR 177
+ +GC+ + YN I+ AR +
Sbjct: 325 PSSSSRKNFKGCMESINYNGINITVLARRK 354
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 51 AILFLSAGKIDYCLLRLESG-RLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEAN 109
+ + GK D+ L L+S + ++G G EI L+D WH + R
Sbjct: 834 GVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIVVRSPTPLNDDQWHRITAERNVKQ 893
Query: 110 VTLTVDLIHTTFEKLPGK-FFELNIHYGLFIGGQGDFTELFLGHIEWLR 157
+L VD + K P + L ++ LF+GG G + FLG I LR
Sbjct: 894 ASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGGAGG-QQGFLGCIRSLR 941
Score = 37.4 bits (85), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 10/152 (6%)
Query: 41 FTSPLTKRSDAILFLSAGKIDY-CLLRLESGRLKVHINLGAGDTEISTPRGLR-LDDLLW 98
F+ TK +L++S+ D+ +L +G L++ NLG + R + +
Sbjct: 1053 FSFSTTKAPCILLYISSFTTDFLAVLVKPTGSLQIRYNLGGTREPYNIDTDHRNMANGQP 1112
Query: 99 HSVNVTRIEANVTLTVDLIHTTFEKLPGKFFEL-NIHYGLFIG-----GQGDFTELFLGH 152
HSVN TR E + L +D + LP L N LF+G G+ D E+ +
Sbjct: 1113 HSVNNTRHEKTIILKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKID-QEIHKYN 1171
Query: 153 IEWLRGCLSDVIYNNIDTLKRARARSSQADAQ 184
GCLS V +N I LK A R + A A
Sbjct: 1172 TPGFTGCLSRVQFNQIAPLK-AALRQTNASAH 1202
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
++DY L+L+ GRL +LG G T++S P L D WH+V I+ +TVD
Sbjct: 2769 QMDYATLQLQEGRLHFMFDLGKGRTKVSHP--ALLSDGKWHTVKTEYIKRKAFMTVDGQE 2826
Query: 119 TTFEKLPGKFFELNIHYGLFIGG-QGDFTELFLGHI-EWLRGCLSDVIYNNIDTLKRARA 176
+ + G L++ L++GG + +G I + C+ +++ N L + R
Sbjct: 2827 SPSVTVVGNATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMVNG-QQLDKDRP 2885
Query: 177 RSSQA 181
S+ A
Sbjct: 2886 LSASA 2890
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Query: 34 ELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGD-TEISTPRGLR 92
+L I+L F + T ++ +L +S+ K+D L + G++ H+N GAG T PR R
Sbjct: 2922 DLNITLEFRT--TSKNGVLLGISSAKVDAIGLEIVDGKVLFHVNNGAGRITATYQPRAAR 2979
Query: 93 -LDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG-QGDFTELFL 150
L D WH++ + + + LTVD E + + +++GG + L
Sbjct: 2980 ALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAHIKQNCL 3039
Query: 151 GHIEWLRGCLSDV 163
RGC+ ++
Sbjct: 3040 SSRASFRGCVRNL 3052
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 46 TKRSDAILFL--SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNV 103
T+ D +LF S+ D+ + + G++ +LG+G T + P + +++ WHS+ +
Sbjct: 2156 TQEPDNLLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPE-VSINNNRWHSIYI 2214
Query: 104 TRIEANVTLTV--------DLIHTTFEKLPGKFFELNIHYGLFIGG-QGDFTELFLGHIE 154
TR +L+V + T+ P K ++N +F+GG G + +
Sbjct: 2215 TRFGNMGSLSVKEASAAENPPVRTSKSPGPSKVLDINNSTLMFVGGLGGQIKKSPAVKVT 2274
Query: 155 WLRGCLSDVIYN 166
+GC+ + N
Sbjct: 2275 HFKGCMGEAFLN 2286
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 38 SLLFTSPLTKRSDAILFLSAGK-----------IDYCLLRLESGRLKVHINLGAGDT--- 83
S L + TK S IL ++ GK + + + L GR++VH+N G G +
Sbjct: 2516 SSLLATFATKNSSGILLVALGKDAEEAGGAQAHVPFFSIMLLEGRIEVHVNSGDGTSLRK 2575
Query: 84 -EISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKL----PGKFFELNIHYGLF 138
+ P G D HS+++ R +T+ VD KL GK +++ L+
Sbjct: 2576 ALLHAPTG-SYSDGQEHSISLVRNRRVITIQVDENSPVEMKLGPLTEGKTIDIS---NLY 2631
Query: 139 IGG-QGDFTELFLGHIEWLRGCLSDVI 164
IGG D L GC+ +V+
Sbjct: 2632 IGGLPEDKATPMLKMRTSFHGCIKNVV 2658
Score = 31.6 bits (70), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 13/105 (12%)
Query: 36 MISLLFTSPLTKRSDAILFL--SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRL 93
I +LF+ T + +LF S G D+ + L GR+KV ++LG+G + T R R
Sbjct: 2336 QIVILFS---TFSPNGLLFYLASNGTKDFLSIELVRGRVKVMVDLGSGPLTLMTDR--RY 2390
Query: 94 DDLLWHSVNVTRIEANVTLTVDLIHTTFEK------LPGKFFELN 132
++ W+ + R L V + T +K PG +LN
Sbjct: 2391 NNGTWYKIAFQRNRKQGLLAVFDAYDTSDKETKQGETPGAASDLN 2435
>sp|A1XQX8|NR3AA_DANRE Neurexin-3a OS=Danio rerio GN=nrxn3a PE=2 SV=1
Length = 1697
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 67/171 (39%), Gaps = 29/171 (16%)
Query: 28 ALLYHKELMISLLFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVH 75
A E L +P+ SD I L L GK DY L L+ G + +
Sbjct: 259 ATFRGSEFFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLV 318
Query: 76 INLGAGDTE-ISTPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHT 119
INLG+G E I P + +D WH V VTR + VT++VD I T
Sbjct: 319 INLGSGAFEAIVEPVNGKFNDNSWHDVKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILT 378
Query: 120 TFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNNID 169
T + L ++GG +L + GCL +V+Y N D
Sbjct: 379 TTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 429
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S D+ + L G + NLG G I L D W
Sbjct: 910 LFFQFKTTSADGFILFNSGDGSDFIAVELVKGYIHYVFNLGNGPNVIKGNSERALHDNQW 969
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGD--FTEL--FLGHI 153
H+V +TR +NV TL VD ++ L++ LFI G G + L +
Sbjct: 970 HNVVITRDNSNVHTLKVDA--KAVSQVVNGAKNLDLKGDLFIAGLGPNMYNNLPKLVASR 1027
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQ 180
E +GCL+ V N D + A RS Q
Sbjct: 1028 EGFKGCLASVDLNGRLPDLINDALFRSGQ 1056
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 56 SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
+ G DY +L +E G++ V N+G D + ++D +H V TR N TL VD
Sbjct: 1161 APGLGDYLMLHIEQGKIGVTFNIGTADITVQE-SSTAVNDGKYHVVRFTRNGGNATLQVD 1219
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA 80
+Y K +M +++ T +++R+ +L + + LRLE R+K+ +NL
Sbjct: 707 MYMKVVMPTVMHTEAEDVSLRFMSQRAYGLLMATTSRDSADTLRLELDGSRVKLTVNLDC 766
Query: 81 GDTEISTPRG-------LRLDDLLWHSVNVTRIEANVTLTVD 115
++ +G +L+D WH+V V R + LTVD
Sbjct: 767 IRINCNSSKGPETLYAGQKLNDNEWHTVRVIRRGKSYKLTVD 808
>sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5
Length = 3165
Score = 47.4 bits (111), Expect = 7e-05, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 7 RVKDEALSNAATPTFHKSCEKALL----YH--KELMISLLFTSPLTKRSDAILFLSAGKI 60
+VK EALS + P+F +S E + + +H K+ I L F PL +D ILF +A +
Sbjct: 2707 KVKKEALS-ISDPSF-RSNELSWMSFASFHVRKKTHIQLQF-QPLA--ADGILFYAAQHL 2761
Query: 61 -----DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
D+ + L + +++ NLG + T + + ++ WH + R+ A L +D
Sbjct: 2762 KAQSGDFLCISLVNSSVQLRYNLGDRTIILETLQKVTINGSTWHIIKAGRVGAEGYLDLD 2821
Query: 116 LIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIE----WLRGCLSDVIYNN 167
I+ T EK K L+ + +IGG + IE +GC+ VI NN
Sbjct: 2822 GINVT-EKASTKMSSLDTNTDFYIGGVSSLNLVNPMAIENEPVGFQGCIRQVIINN 2876
>sp|A1XQY1|NR3BA_DANRE Neurexin-3b OS=Danio rerio GN=nrxn3b PE=2 SV=1
Length = 1686
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 29/159 (18%)
Query: 40 LFTSPLTKRSDAI-----------LFLSAGK-IDYCLLRLESGRLKVHINLGAGDTE-IS 86
L +P+ SD I L L GK DY L L+ G + + INLG+G E I
Sbjct: 267 LSQNPIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLVINLGSGAFEAIV 326
Query: 87 TPRGLRLDDLLWHSVNVTR---------------IEANVTLTVDLIHTTFEKLPGKFFEL 131
P + +D WH + VTR + VT++VD I TT + L
Sbjct: 327 EPVNGKFNDNAWHDIKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTML 386
Query: 132 NIHYGLFIGGQGDFTELFLGHIE-WLRGCLSDVIYNNID 169
++GG +L + GCL +V+Y N D
Sbjct: 387 GSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNND 425
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 30 LYHKELMISLLFTSP-------LTKRSDAILFLSAGKIDYCLLRLE--SGRLKVHINLGA 80
+Y K +M +++ T +++R+ +L + + LRLE SGR+K+ +NLG
Sbjct: 703 MYMKVVMPTIIHTEAEDVSLRFMSQRAFGLLMAATSRESADTLRLELDSGRVKLIVNLGK 762
Query: 81 GDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
G + G +++D WHSV VTR N+ L VD
Sbjct: 763 GPETLYA--GQKVNDNDWHSVRVTRRGKNIKLMVD 795
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 62/149 (41%), Gaps = 9/149 (6%)
Query: 39 LLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLW 98
L F T ILF S D+ + L G + NLG G + + L+D W
Sbjct: 897 LFFQFKTTSGDGFILFNSGDGNDFIAVELVKGYIHYVFNLGNGPSLLKGNSDSPLNDNQW 956
Query: 99 HSVNVTRIEANV-TLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI---- 153
H+V +TR +N TL VD + ++ L++ LF+ G G L +
Sbjct: 957 HNVVITRDASNTHTLKVDA--KSVSQVVNGAKNLDLKGDLFVAGLGPNMYQNLPKLVVPR 1014
Query: 154 EWLRGCLSDVIYNN--IDTLKRARARSSQ 180
E +GCL+ + N D + A RS Q
Sbjct: 1015 EGFQGCLASMDLNGRLPDLINDALFRSGQ 1043
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVD 115
DY +L +E G++ V N+G D + ++D +H V TR N TL VD
Sbjct: 1144 DYIMLHIEEGKVCVTFNIGTVDISVKE-MTTEVNDGKYHVVRFTRNGGNATLQVD 1197
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 47.0 bits (110), Expect = 8e-05, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 27 KALLYHKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEIS 86
K L E + + T L S + + A DY +L + GRL+ + G+G +S
Sbjct: 3841 KYRLTENENKLEMKLTMRLRTYSTHAVVMYARGTDYSILEIHHGRLQYKFDCGSGPGIVS 3900
Query: 87 TPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG----- 141
+ ++++D WH+V + L +D +HT PG LN+ +F GG
Sbjct: 3901 V-QSIQVNDGQWHAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQ 3959
Query: 142 ---QGDFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARS 178
G ++ G RGC+ + N + ++ RS
Sbjct: 3960 GTRHGRSPQVGNG----FRGCMDSIYLNGQELPLNSKPRS 3995
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 46 TKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTR 105
T + L ++GK+DY +L + +G ++ +LG+G+ IS + + D WH +++ R
Sbjct: 3971 TVQQTGTLLYASGKVDYNILEIINGAVQYRFDLGSGEGVISV-SSINISDGEWHQISLER 4029
Query: 106 IEANVTLTVDLIHTTFEKLPGKFFELNIHYG-LFIGGQGDFTELFLGHIEWLR---GCLS 161
+ + VD H + PG LNI +F+G + +G+ + R GC++
Sbjct: 4030 SLNSAKVMVDNKHVSHGSAPGVNGILNIQSNDIFVGAEVRPHPSIIGYEDIQRGFIGCMA 4089
Query: 162 DV 163
++
Sbjct: 4090 NI 4091
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/144 (29%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 32 HKELMISLLFTSPLTKRSDAILFLSAGKI----DYCLLRLESGRLKVHINLGAGDTEIST 87
H EL + + F PL D +L S GK D+ L + G L+ LG+G + +
Sbjct: 3948 HHELRLDVEF-KPLA--PDGVLLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRS 4004
Query: 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE 147
L L WH V+ R+ + +L V+ PGK LN+H L++GG
Sbjct: 4005 AEPLALGR--WHRVSAERLNKDGSLRVNGGRPVLRSSPGKSQGLNLHTLLYLGGVEPSVP 4062
Query: 148 L-----FLGHIEWLRGCLSDVIYN 166
L H RGC+ +V N
Sbjct: 4063 LSPATNMSAH---FRGCVGEVSVN 4083
Score = 34.7 bits (78), Expect = 0.39, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L L+ G L LG+G+ + + ++D WH V R ++ VD
Sbjct: 4258 DFISLGLQDGHLVFRYQLGSGEARLVSED--PINDGEWHRVTALREGRRGSIQVDGEELV 4315
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVIYNN 167
+ PG +N ++IGG D L G + GC+ +++ ++
Sbjct: 4316 SGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGCVKNLVLHS 4363
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L GR + + G+G I P L L +H+V + R +L V +
Sbjct: 3722 DFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGH--FHTVTLLRSLTQGSLIVGDLAPV 3779
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTEL--------FLGHIEWLRGCLSDVIYNNID 169
GKF L+++ L++GG D+ + F+G + LR ++++++++
Sbjct: 3780 NGTSQGKFQGLDLNEELYLGGYPDYGAIPKAGLSSGFIGCVRELRIQGEEIVFHDLN 3836
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 32 HKELMISLLFTSPLTKRSDAILFLSAGKI----DYCLLRLESGRLKVHINLGAGDTEIST 87
H EL + + F PL + IL S GK D+ L + G L+ LG+G + +
Sbjct: 3265 HHELRLDVEF-KPL--EPNGILLFSGGKSGPVEDFVSLAMVGGHLEFRYELGSGLAVLRS 3321
Query: 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG 141
L L WH V+ R+ + +L VD PGK LN+H L++GG
Sbjct: 3322 HEPLALGR--WHRVSAERLNKDGSLRVDGGRPVLRSSPGKSQGLNLHTLLYLGG 3373
Score = 35.8 bits (81), Expect = 0.21, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L L+ G L LG+G+ + + G ++D WH + R ++ VD
Sbjct: 3574 DFISLGLQDGHLVFSYQLGSGEARLVS--GDPINDGEWHRITALREGQRGSIQVDGEDLV 3631
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTELFLGHI-EWLRGCLSDVI 164
+ PG +N ++IGG D L G + GC+ +++
Sbjct: 3632 TGRSPGPNVAVNTKDIIYIGGAPDVATLTRGKFSSGITGCIKNLV 3676
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L GR + + G+G I P L L +H+V + R +L V +
Sbjct: 3040 DFISFGLVGGRPEFRFDAGSGMATIRHPTPLALGQ--FHTVTLLRSLTQGSLIVGNLAPV 3097
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTEL--------FLGHIEWLRGCLSDVIYNNID 169
GKF L+++ L++GG D+ + F+G + LR ++++++++
Sbjct: 3098 NGTSQGKFQGLDLNEELYLGGYPDYGAIPKAGLSSGFVGCVRELRIQGEEIVFHDVN 3154
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 59 KIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118
+ DY +L+L GRL +LG G T++S P L D WH+V ++ +TVD
Sbjct: 2760 QADYAVLQLHGGRLHFMFDLGKGRTKVSHP--ALLSDGKWHTVKTDYVKRKGFITVDGRE 2817
Query: 119 TTFEKLPGKFFELNIHYGLFIGG-QGDFTELFLGHI-EWLRGCLSDVIYNN 167
+ + G L++ ++GG + +G+I + C+ DV N+
Sbjct: 2818 SPMVTVVGDGTMLDVEGLFYLGGLPSQYQARKIGNITHSIPACIGDVTVNS 2868
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 46 TKRSDAILFL--SAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNV 103
T+ D +LF S+ D+ + + GR+ +LG+G T + P +DD WHS++V
Sbjct: 2148 TQEPDNLLFYLGSSTASDFLAVEMRRGRVAFLWDLGSGSTRLEFPD-FPIDDNRWHSIHV 2206
Query: 104 TRIEANVTLTVDLIH------TTFEKLPGKFFELNIHYG--LFIGG-QGDFTELFLGHIE 154
R +L+V + T K PG L+++ +F+GG G + +
Sbjct: 2207 ARFGNIGSLSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGLGGQIKKSPAVKVT 2266
Query: 155 WLRGCLSDVIYN 166
+GCL + N
Sbjct: 2267 HFKGCLGEAFLN 2278
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 32 HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGD-TEISTPR- 89
++ I+L F + + ++ +L +S K+D L L G++ H+N GAG T P+
Sbjct: 2911 QSDVNITLEFRT--SSQNGVLLGISTAKVDAIGLELVDGKVLFHVNNGAGRITAAYEPKT 2968
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGG-QGDFTEL 148
L D WH++ + + +TL VD E + ++ + +++GG +
Sbjct: 2969 ATVLCDGKWHTLQANKSKHRITLIVDGNAVGAESPHTQSTSVDTNNPIYVGGYPAGVKQK 3028
Query: 149 FLGHIEWLRGCL 160
L RGCL
Sbjct: 3029 CLRSQTSFRGCL 3040
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 27/143 (18%)
Query: 46 TKRSDAILFLSAGKI--DYCLLRLESGRLKVHINLGAG-DTEISTPRGLRLDDLLWHSVN 102
T+R + +L + K D+ + L GR+ I +GA +I+T L+D WH+V
Sbjct: 3381 TERPNGLLIYAGSKQRDDFIAVYLLDGRVTYEIRVGAQLQAKITTEA--ELNDGTWHTVE 3438
Query: 103 VTRIEANVTLTVDLIHTTFEKLPGKFFELN---------IHYGLFIGGQGDFTEL----- 148
V R + V+L +D + PG +LN + +++GG F E
Sbjct: 3439 VVRTQRKVSLLIDKLEQ-----PGS-VDLNAERSAPVLAVELPIYLGGVNKFLESEVKNL 3492
Query: 149 --FLGHIEWLRGCLSDVIYNNID 169
F + + GCL ++ ++ +D
Sbjct: 3493 TDFKTEVPYFNGCLKNIKFDAMD 3515
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L L G L NLG+G I +D WH V R + +TVD
Sbjct: 891 DFISLGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGAR 948
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFT-ELFLGHIEWLRGCLS 161
K PG +LNI+ L++GG + ++ L GC+S
Sbjct: 949 TGKSPGMMRQLNINGALYVGGMKEIALHTNRQYMRGLVGCIS 990
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L L G L NLG+G I +D WH V R + +TVD
Sbjct: 890 DFISLGLRDGALVFSYNLGSGVASIMV--NGSFNDGRWHRVKAVRDGQSGKITVDDYGAR 947
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTELFL----GHIEWLRGCLS 161
K PG +LNI+ L++GG E+ L ++ L GC+S
Sbjct: 948 TGKSPGMMRQLNINGALYVGG---MKEIALHTNRQYMRGLVGCIS 989
>sp|Q9BZ76|CNTP3_HUMAN Contactin-associated protein-like 3 OS=Homo sapiens GN=CNTNAP3 PE=2
SV=3
Length = 1288
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 10/151 (6%)
Query: 36 MISLLFTSPLTKRSDAILFLSAGK-IDYCLLRLESGRLKVHINLGAGD-----TEISTPR 89
+ISL F + +S+ IL G+ ++ L L G+L +N G ++
Sbjct: 207 VISLKFKA---MQSNGILLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTL 263
Query: 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF 149
G LDD WHSV + ++ V TVD HT + G L++++ + GG
Sbjct: 264 GSLLDDQHWHSVLIELLDTQVNFTVDK-HTHHFQAKGDSSYLDLNFEISFGGIPTPGRSR 322
Query: 150 LGHIEWLRGCLSDVIYNNIDTLKRARARSSQ 180
+ GCL ++ YN +D + A+ Q
Sbjct: 323 AFRRKSFHGCLENLYYNGVDVTELAKKHKPQ 353
>sp|B4F785|EGFLA_RAT Pikachurin OS=Rattus norvegicus GN=Egflam PE=2 SV=1
Length = 1005
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 61 DYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTT 120
D+ L L G L NLG+G I D WH V R + +TVD
Sbjct: 878 DFISLGLRDGALVFSYNLGSGVASIMV--NGSFSDGRWHRVKAVRDGQSGKITVDDYGAR 935
Query: 121 FEKLPGKFFELNIHYGLFIGGQGDFTELFL----GHIEWLRGCLS 161
K PG +LNI+ L++GG E+ L ++ L GC+S
Sbjct: 936 TGKSPGMMRQLNINGALYVGG---MKEIALRTNRQYMRGLVGCIS 977
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,055,795
Number of Sequences: 539616
Number of extensions: 2818044
Number of successful extensions: 5863
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5578
Number of HSP's gapped (non-prelim): 236
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)