Query psy6627
Match_columns 195
No_of_seqs 109 out of 1065
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 23:02:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2h0b_A Neurexin-1-alpha; B-san 100.0 1.9E-30 6.3E-35 196.6 18.6 168 16-186 5-184 (184)
2 2r1d_A Neurexin-1-beta, neurex 100.0 2E-30 6.7E-35 202.4 18.3 177 4-192 28-215 (226)
3 3v64_A Low-density lipoprotein 100.0 2.7E-30 9.3E-35 196.9 18.5 165 18-192 4-190 (191)
4 3bod_A Neurexin-1-alpha; neure 100.0 8.4E-30 2.9E-34 192.1 18.3 159 15-185 3-173 (178)
5 2r16_A Neurexin-1-alpha; beta- 100.0 1.3E-29 4.4E-34 191.8 18.8 156 15-177 4-166 (182)
6 2r1b_A Neurexin-1-beta, neurex 100.0 2E-29 6.8E-34 196.1 18.9 170 8-191 4-216 (220)
7 3pve_A Agrin, AGRN protein; mR 100.0 1.9E-29 6.4E-34 192.0 17.8 153 13-170 6-172 (189)
8 1pz7_A Agrin; structural prote 100.0 3.9E-29 1.3E-33 192.3 18.6 149 17-170 13-186 (204)
9 3sh4_A LG3 peptide; actin disa 100.0 7.1E-28 2.4E-32 184.1 16.1 147 16-167 5-167 (195)
10 1d2s_A SHBG, sex hormone-bindi 100.0 4.2E-27 1.4E-31 176.1 15.9 143 19-170 8-157 (170)
11 2jd4_A Laminin subunit alpha-1 99.9 1.7E-25 5.8E-30 186.8 18.3 149 17-170 20-179 (383)
12 1f5f_A SHBG, sex hormone-bindi 99.9 1.1E-25 3.8E-30 173.1 14.9 142 24-170 28-175 (205)
13 1dyk_A Laminin alpha 2 chain; 99.9 3.1E-25 1.1E-29 186.0 18.1 147 18-170 35-192 (394)
14 2jd4_A Laminin subunit alpha-1 99.9 2.3E-25 7.8E-30 186.0 16.0 170 18-194 200-382 (383)
15 3asi_A Neurexin-1-alpha; beta- 99.9 6.2E-25 2.1E-29 185.1 17.8 149 17-170 6-164 (410)
16 1h30_A GAS6, growth-arrest-spe 99.9 7.8E-25 2.7E-29 185.1 16.7 148 18-170 42-199 (422)
17 3qcw_A Neurexin-1-alpha; synap 99.9 2.1E-24 7.1E-29 202.9 20.1 181 9-192 224-417 (1245)
18 1dyk_A Laminin alpha 2 chain; 99.9 4.6E-24 1.6E-28 178.9 17.2 166 19-192 214-393 (394)
19 3qcw_A Neurexin-1-alpha; synap 99.9 1.9E-23 6.5E-28 196.4 20.9 161 5-170 410-596 (1245)
20 3asi_A Neurexin-1-alpha; beta- 99.9 2.4E-23 8.2E-28 175.4 17.9 155 19-185 227-393 (410)
21 2wjs_A Laminin subunit alpha-2 99.9 2.1E-23 7.3E-28 183.6 18.3 165 18-191 12-194 (608)
22 2wjs_A Laminin subunit alpha-2 99.9 1.4E-23 4.9E-28 184.7 16.7 166 18-193 205-385 (608)
23 1h30_A GAS6, growth-arrest-spe 99.8 5.8E-21 2E-25 161.4 7.6 143 19-170 222-397 (422)
24 1za4_A Thrombospondin 1; TSP-1 98.6 9.1E-07 3.1E-11 69.5 14.2 121 33-165 72-203 (251)
25 2erf_A Thrombospondin-1; TSP-1 98.6 2E-06 6.9E-11 65.7 13.5 121 33-165 62-193 (209)
26 3flp_A SAP-like pentraxin; phy 98.5 3E-06 1E-10 65.0 13.2 143 23-170 17-173 (217)
27 2v73_A CBM40, putative EXO-alp 98.4 1.9E-05 6.4E-10 59.0 15.8 132 32-171 39-179 (191)
28 3kqr_A Serum amyloid P-compone 98.4 9.1E-06 3.1E-10 61.8 14.2 138 23-170 17-164 (204)
29 3pvn_A C-reactive protein; pen 98.3 9.1E-06 3.1E-10 61.8 12.3 138 23-170 17-166 (206)
30 2uur_A Collagen alpha-1(IX) ch 98.2 6.4E-05 2.2E-09 58.7 15.2 129 32-167 85-219 (245)
31 4dqa_A Uncharacterized protein 98.2 3E-05 1E-09 63.8 13.6 141 15-170 139-293 (355)
32 2sli_A Intramolecular trans-si 96.9 0.02 6.9E-07 50.8 13.5 129 33-170 35-182 (679)
33 1a8d_A Tetanus neurotoxin; clo 96.9 0.096 3.3E-06 43.7 16.3 128 32-170 84-233 (452)
34 2jkb_A Sialidase B; intramolec 96.8 0.052 1.8E-06 48.3 15.2 131 32-171 56-205 (686)
35 4b1m_A Levanase; hydrolase, CB 96.4 0.056 1.9E-06 39.9 11.4 84 32-119 63-154 (185)
36 2nyy_A Botulinum neurotoxin ty 93.9 4.1 0.00014 38.0 17.7 130 32-170 937-1078(1295)
37 3v0a_B NTNH; botulinum neuroto 91.8 3.9 0.00013 37.3 13.1 91 32-125 901-994 (1196)
38 1epw_A Bontoxilysin B, botulin 89.2 14 0.00049 34.5 15.7 130 32-170 922-1065(1290)
39 3zr5_A Galactocerebrosidase; h 80.8 29 0.00099 30.6 13.9 83 33-118 529-620 (656)
40 4azz_A Levanase; hydrolase; 1. 81.1 0.35 1.2E-05 34.8 0.0 69 48-118 60-132 (172)
41 3rsj_A BONT/F; clostridium bot 78.9 26 0.00088 28.8 16.7 129 32-170 66-207 (413)
42 3u1x_A Putative glycosyl hydro 75.3 10 0.00035 28.8 7.1 32 92-123 156-187 (236)
43 2gy5_A Angiopoietin-1 receptor 73.0 0.2 6.8E-06 41.9 -3.4 40 47-86 364-405 (423)
44 3imm_A Putative secreted glyco 59.1 35 0.0012 25.0 7.0 27 95-121 119-145 (201)
45 3dl3_A Tellurite resistance pr 49.0 58 0.002 21.9 6.4 44 59-102 36-85 (119)
46 1ms9_A Trans-sialidase; trans- 45.7 1.6E+02 0.0054 25.9 11.9 140 19-170 467-626 (648)
47 3s5q_A Putative glycosylhydrol 44.5 62 0.0021 24.0 6.3 26 95-120 132-157 (214)
48 3bb6_A Uncharacterized protein 41.3 68 0.0023 21.9 5.5 48 60-107 38-91 (127)
49 1dyp_A Kappa-carrageenase; hyd 38.4 76 0.0026 24.1 6.2 29 95-123 189-217 (271)
50 1w0p_A Sialidase; hydrolase, n 38.4 86 0.0029 28.2 7.2 81 33-120 92-178 (781)
51 3d7q_A XISI protein-like; stru 37.8 89 0.003 20.8 6.1 54 24-80 18-77 (112)
52 2nlv_A XISI protein-like; XISI 37.7 89 0.003 20.8 6.5 53 24-79 18-76 (112)
53 2ayh_A 1,3-1,4-beta-D-glucan 4 34.0 64 0.0022 23.6 4.9 26 96-121 142-167 (214)
54 3i4i_A 1,3-1,4-beta-glucanase; 31.6 94 0.0032 23.3 5.5 28 95-122 161-188 (234)
55 2nwv_A XISI protein-like; YP_3 31.0 1.2E+02 0.0041 20.2 5.4 53 24-79 18-78 (114)
56 1cpn_A Circularly permuted; hy 30.2 96 0.0033 22.7 5.3 27 96-122 84-110 (208)
57 3o5s_A Beta-glucanase; glycosy 29.7 57 0.0019 24.6 4.0 28 95-122 165-192 (238)
58 1ajo_A CPA16M-127, circularly 25.5 1.3E+02 0.0044 22.1 5.3 26 97-122 17-42 (214)
59 3iln_A Laminarinase; jelly ROW 25.0 1.2E+02 0.0042 22.7 5.2 30 94-123 163-192 (251)
60 3h3l_A Putative sugar hydrolas 24.5 1.3E+02 0.0046 22.6 5.3 31 93-123 150-180 (241)
61 3gne_A Val-1; alginate lyase, 23.5 2E+02 0.0067 22.0 5.9 28 92-119 159-197 (252)
62 3vuo_A NTNHA; protection of bo 22.9 4.9E+02 0.017 24.6 15.8 92 32-125 898-991 (1196)
63 3juu_A Porphyranase B; glycosi 20.1 2.3E+02 0.0079 21.8 5.9 30 94-123 197-227 (280)
No 1
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.97 E-value=1.9e-30 Score=196.58 Aligned_cols=168 Identities=27% Similarity=0.366 Sum_probs=136.5
Q ss_pred CCCcccc-cchhhhccc-----CccEEEEEEEecCCCCCCCeEEEEEcCCCCEEEEEEECCEEEEEEEcCCCeeEE-eCC
Q psy6627 16 AATPTFH-KSCEKALLY-----HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEI-STP 88 (195)
Q Consensus 16 ~~~~~F~-~sy~~~~~~-----~~~~~l~l~f~~~rT~~~~glL~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~-~~~ 88 (195)
.+.++|. +||++|+.. ....+++|+| ||++++|+|||.++..||++|+|.+|++.+.++.|++.... ...
T Consensus 5 ~~~~~F~G~sy~~~~~~~~~~~~~~~~isl~f---rT~~~~GlLl~~g~~~d~l~l~L~~G~l~~~~~~G~g~~~~~~~~ 81 (184)
T 2h0b_A 5 EYIATFKGSEYFCYDLSQNPIQSSSDEITLSF---KTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEP 81 (184)
T ss_dssp CCEEEEESSEEEEEECSSSCEEESEEEEEEEE---EESCSCEEEEEECCTTEEEEEEEETTEEEEEEEESSCEEEEEECC
T ss_pred cceeEECCceEEEEccccCccccCccEEEEEE---EeCCCCEEEEEeCCCCCEEEEEEECCEEEEEEECCCCeEEEEEec
Confidence 3567899 899999875 3568899999 99999999999977689999999999999999999886442 223
Q ss_pred CcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc-cCCCcCceeEeccEEECC
Q psy6627 89 RGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-LGHIEWLRGCLSDVIYNN 167 (195)
Q Consensus 89 ~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~-~~~~~~F~GCi~~v~in~ 167 (195)
....+|||+||+|.+.+..+.+.|+||+........++....++....+||||.|.....+ .+...+|.|||+++++|+
T Consensus 82 ~~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~~~~~~~~~~~F~GCi~~v~in~ 161 (184)
T 2h0b_A 82 VNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN 161 (184)
T ss_dssp SSSCSSSSSCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGGGSTTCSCCCBCEEEEEEEEEEE
T ss_pred CCcccCCCCeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCCccccCcCCcccCCCEEEeeEEEECC
Confidence 5678999999999999999999999999666555566666567777889999999854322 356789999999999999
Q ss_pred cch----hhHHhcCCCceeeccc
Q psy6627 168 IDT----LKRARARSSQADAQGK 186 (195)
Q Consensus 168 ~~l----~~~~~~~~~~~~~~~v 186 (195)
+.+ ...++...+++..+|+
T Consensus 162 ~~~~l~l~~~a~~~~~~~~~~g~ 184 (184)
T 2h0b_A 162 NDVRLELSRLAKQGDPKMKIHGV 184 (184)
T ss_dssp SSCEECHHHHHHHCCTTEEEEEC
T ss_pred EEcchhHHHHHhcCCCceEeccC
Confidence 874 4556666777777664
No 2
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.97 E-value=2e-30 Score=202.44 Aligned_cols=177 Identities=20% Similarity=0.215 Sum_probs=137.0
Q ss_pred ccccccccccCCCCCcccccchhhhccc------CccEEEEEEEecCCCCCCCeEEEEEc--C-CCCEEEEEEECCEEEE
Q psy6627 4 RKLRVKDEALSNAATPTFHKSCEKALLY------HKELMISLLFTSPLTKRSDAILFLSA--G-KIDYCLLRLESGRLKV 74 (195)
Q Consensus 4 ~~~~~~c~~~~~~~~~~F~~sy~~~~~~------~~~~~l~l~f~~~rT~~~~glL~~~~--~-~~~~l~l~l~~g~l~~ 74 (195)
..+..+|+..-......|.+||+.|..+ ....+++|.| ||.+++|+|||.+ + ..||++|+|.+|+|.+
T Consensus 28 ~~~g~r~~~~gc~y~f~~~gs~i~y~~~~~~~~~~~~~~isl~F---rT~~~~GlLl~~~~~~~~~dfi~L~L~~G~l~~ 104 (226)
T 2r1d_A 28 SPASLRGGHAGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGF---STVQKEAVLVRVDSSSGLGDYLELHIHQGKIGV 104 (226)
T ss_dssp -------CCCSSEEEEEEEEEEEEEECCGGGCCCBSEEEEEEEE---ECCCSSEEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred cccccCcccCCeEEEEecCCcEEEEECCccccccccccEEEEEE---EeCCCCEEEEEecCCCCCCCEEEEEEECCEEEE
Confidence 3567778765444455566889888754 2346899999 9999999999964 3 4799999999999999
Q ss_pred EEEcCCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeE-EcCCceeeeecCCcEEEcccCCCCccccCCC
Q psy6627 75 HINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFE-KLPGKFFELNIHYGLFIGGQGDFTELFLGHI 153 (195)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~-~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~ 153 (195)
.++.|++...+.. ....+|||+||.|.+.+..+.+.|+||+...... ..++....++....+||||+|..
T Consensus 105 ~~~~G~~~~~~~~-~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~-------- 175 (226)
T 2r1d_A 105 KFNVGTDDIAIEE-SNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG-------- 175 (226)
T ss_dssp EEESSSCEEEEEC-CSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTTT--------
T ss_pred EEECCCCcEEEEe-CCeEecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccCC--------
Confidence 9999998777765 3578999999999999999999999999643322 34445556777778999999962
Q ss_pred cCceeEeccEEECCcchhhHHhcCCCceeecc-ccCCCCC
Q psy6627 154 EWLRGCLSDVIYNNIDTLKRARARSSQADAQG-KRNRTSN 192 (195)
Q Consensus 154 ~~F~GCi~~v~in~~~l~~~~~~~~~~~~~~~-v~~gC~~ 192 (195)
.+|.|||++|++|++.+++++....+.+...| |..+|..
T Consensus 176 ~~F~GCi~~v~ing~~vl~la~~~~~~v~~~g~V~~~C~~ 215 (226)
T 2r1d_A 176 QPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEV 215 (226)
T ss_dssp CCCCEEEEEEEETTBCHHHHHHTTCTTEEEEEEEEECCCC
T ss_pred CCCeEEEeeEEECCEeHHhhhhccCCceEEEEEEEECCCC
Confidence 78999999999999998888877767766654 7889974
No 3
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.97 E-value=2.7e-30 Score=196.92 Aligned_cols=165 Identities=16% Similarity=0.212 Sum_probs=134.5
Q ss_pred Ccccc-cchhhhccc---------------CccEEEEEEEecCCCCCCCeEEEEEcC---CCCEEEEEEECCEEEEEEEc
Q psy6627 18 TPTFH-KSCEKALLY---------------HKELMISLLFTSPLTKRSDAILFLSAG---KIDYCLLRLESGRLKVHINL 78 (195)
Q Consensus 18 ~~~F~-~sy~~~~~~---------------~~~~~l~l~f~~~rT~~~~glL~~~~~---~~~~l~l~l~~g~l~~~~~~ 78 (195)
+.+|. +||++|+.. ....+|+|+| ||++++|+|||.++ ..||++|+|.+|++++.++.
T Consensus 4 ~~~F~G~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~f---rT~~~~GlLl~~~~~~~~~d~l~l~L~~G~l~~~~~~ 80 (191)
T 3v64_A 4 TLAFDGRTYIEYLNAVIESELTNEIPAEKALQSNHFELSL---RTEATQGLVLWIGKAAERADYMALAIVDGHLQLSYDL 80 (191)
T ss_dssp EEEEESSCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEE---ECSCSSEEEEEESCCSTTCCEEEEEEETTEEEEEEES
T ss_pred cceecCceeEEEccccccccccccccccccccceEEEEEE---EeCCCCeEEEEeCCCCCCCcEEEEEEECCEEEEEEEC
Confidence 45788 899999864 3568899999 99999999999976 37999999999999999999
Q ss_pred CCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc---cCCCcC
Q psy6627 79 GAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF---LGHIEW 155 (195)
Q Consensus 79 g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~---~~~~~~ 155 (195)
|++...+.. ...++||+||+|.+.+..+.+.|+||+........++....++....+||||.|...... .....+
T Consensus 81 G~~~~~l~s--~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~ 158 (191)
T 3v64_A 81 GSQPVVLRS--TVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTG 158 (191)
T ss_dssp SSCCEEEEE--EEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSCCSSCCSCGGGTSB
T ss_pred CCccEEEec--CccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCcccccccccccccCC
Confidence 988766654 578999999999999999999999999766666777777778888899999999864321 134689
Q ss_pred ceeEeccEEECCcchhhHHhcCCCceeeccccCCCCC
Q psy6627 156 LRGCLSDVIYNNIDTLKRARARSSQADAQGKRNRTSN 192 (195)
Q Consensus 156 F~GCi~~v~in~~~l~~~~~~~~~~~~~~~v~~gC~~ 192 (195)
|.|||++|++|++.+. ... .....+...||+.
T Consensus 159 F~GCi~~l~in~~~l~-l~~----~~~~~~~~~gC~~ 190 (191)
T 3v64_A 159 FVGCLRDVVVGHRQLH-LLE----DAVTKPELRPCPT 190 (191)
T ss_dssp CEEEEEEEEETTEECC-TTT----TCSBCCCCCCCSC
T ss_pred ceEEeeEEEECCEEcc-chh----HHhcCCCCCCCCC
Confidence 9999999999999861 111 1234556789974
No 4
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.97 E-value=8.4e-30 Score=192.15 Aligned_cols=159 Identities=25% Similarity=0.304 Sum_probs=130.2
Q ss_pred CCCCcccc--cchhhhccc------CccEEEEEEEecCCCCCCCeEEEEEc---CCCCEEEEEEECCEEEEEEEcCCCee
Q psy6627 15 NAATPTFH--KSCEKALLY------HKELMISLLFTSPLTKRSDAILFLSA---GKIDYCLLRLESGRLKVHINLGAGDT 83 (195)
Q Consensus 15 ~~~~~~F~--~sy~~~~~~------~~~~~l~l~f~~~rT~~~~glL~~~~---~~~~~l~l~l~~g~l~~~~~~g~~~~ 83 (195)
--|+.+|. +||+.|+.+ ....+++|.| ||.+++|+|||.. +..||++|+|.+|++.+.++.|++..
T Consensus 3 ~~t~~~F~~~~s~l~y~~~~~~~~~~~~~~isl~F---rT~~~~GlLl~~~~~~~~~dfi~l~L~~G~l~~~~~~G~~~~ 79 (178)
T 3bod_A 3 LGSTYIFSKGGGQITYKWPPNDRPSTRADRLAIGF---STVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDI 79 (178)
T ss_dssp CSCEEEEEEEEEEEEEECCTTSCCCBSEEEEEEEE---ECCCSSEEEEEEEESSSSCCEEEEEEETTEEEEEEESSSCCE
T ss_pred CceEEEECCCCcEEEEECCCcCCCCccccEEEEEE---EECCCCEEEEEEcCCCCCCCEEEEEEECCEEEEEEECCCCce
Confidence 34677897 588887643 2467899999 9999999999953 44899999999999999999999877
Q ss_pred EEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCC-ceeeeecCCcEEEcccCCCCccccCCCcCceeEecc
Q psy6627 84 EISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPG-KFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSD 162 (195)
Q Consensus 84 ~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~-~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~ 162 (195)
.+.. ....+|||+||+|.+.+..+.++|+||+........++ .+..++....+||||.|.. .+|.|||++
T Consensus 80 ~~~~-~~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~--------~~F~GCi~~ 150 (178)
T 3bod_A 80 AIEE-SNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG--------QPFQGQLSG 150 (178)
T ss_dssp EEEC-CSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTTS--------CBCCEEEEE
T ss_pred EEec-CCcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccCC--------CCCEEEEEE
Confidence 7663 46789999999999999999999999996554443333 3344677778999999972 789999999
Q ss_pred EEECCcchhhHHhcCCCceeecc
Q psy6627 163 VIYNNIDTLKRARARSSQADAQG 185 (195)
Q Consensus 163 v~in~~~l~~~~~~~~~~~~~~~ 185 (195)
+++|++.+++++.+..+.+...|
T Consensus 151 v~in~~~vl~l~~~~~~~i~~~G 173 (178)
T 3bod_A 151 LYYNGLKVLNMAAENDANIAIVG 173 (178)
T ss_dssp EEETTEEHHHHHHTTCTTEEEEE
T ss_pred EEECCEehHhHhhcCCCcEEEEE
Confidence 99999998888888777777665
No 5
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.97 E-value=1.3e-29 Score=191.77 Aligned_cols=156 Identities=25% Similarity=0.357 Sum_probs=129.8
Q ss_pred CCCCcccc-cchhhhccc----CccEEEEEEEecCCCCCCCeEEEEEcC--CCCEEEEEEECCEEEEEEEcCCCeeEEeC
Q psy6627 15 NAATPTFH-KSCEKALLY----HKELMISLLFTSPLTKRSDAILFLSAG--KIDYCLLRLESGRLKVHINLGAGDTEIST 87 (195)
Q Consensus 15 ~~~~~~F~-~sy~~~~~~----~~~~~l~l~f~~~rT~~~~glL~~~~~--~~~~l~l~l~~g~l~~~~~~g~~~~~~~~ 87 (195)
..++++|. .||+.|..+ ....+++|+| ||.+++|+|||.++ ..||++|+|.+|++.+.++.|++...+.
T Consensus 4 ~~~~~~F~G~sy~~~~~~~~~~~~~~~isl~F---rT~~~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~G~~~~~~~- 79 (182)
T 2r16_A 4 EATVLSYDGSMFMKIQLPVVMHTEAEDVSLRF---RSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLGKGPETLF- 79 (182)
T ss_dssp -CCEEEEESSCCEEEEEEEEEEESEEEEEEEE---ECSCSSEEEEEEECSSSCCEEEEEEETTEEEEEEESSSCCEEEE-
T ss_pred ccccEEECCCceEEEECCCcCCccceEEEEEE---EECCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCCceEEE-
Confidence 45678999 799987654 5678999999 99999999999985 3799999999999999999998876665
Q ss_pred CCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECC
Q psy6627 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNN 167 (195)
Q Consensus 88 ~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~ 167 (195)
....+|||+||+|.+.+..+.+.|+||+........++....++.. .+|+||.|..... .....+|.|||++|++|+
T Consensus 80 -~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~-~l~iGG~~~~~~~-~~~~~~F~GCi~~l~in~ 156 (182)
T 2r16_A 80 -AGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFH-NIETGIITERRYL-SSVPSNFIGHLQSLTFNG 156 (182)
T ss_dssp -ECSSCCSSSCEEEEEEEETTEEEEEETTCCEEEEECCSSCCCEEEE-EEEESSCCCCTTC-SSCCCCCEEEEEEEEETT
T ss_pred -cCcccCCCCeEEEEEEEECCEEEEEECCceeEeEECCCCccEEecc-CeEECCccccccc-CCCCCCCEEEEeEEEECC
Confidence 3678999999999999999999999999766566667766667776 6999999875321 234578999999999999
Q ss_pred cchhhHHhcC
Q psy6627 168 IDTLKRARAR 177 (195)
Q Consensus 168 ~~l~~~~~~~ 177 (195)
+++++.++..
T Consensus 157 ~~~~~~~~~~ 166 (182)
T 2r16_A 157 MAYIDLCKNG 166 (182)
T ss_dssp EEHHHHHHHT
T ss_pred EEhHHHHhcC
Confidence 9987777654
No 6
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.97 E-value=2e-29 Score=196.07 Aligned_cols=170 Identities=24% Similarity=0.273 Sum_probs=129.3
Q ss_pred ccccccCCCCCcccc--cchhhhccc------CccEEEEEEEecCCCCCCCeEEEEE--cC-CCCEEEEEEECCEEEEEE
Q psy6627 8 VKDEALSNAATPTFH--KSCEKALLY------HKELMISLLFTSPLTKRSDAILFLS--AG-KIDYCLLRLESGRLKVHI 76 (195)
Q Consensus 8 ~~c~~~~~~~~~~F~--~sy~~~~~~------~~~~~l~l~f~~~rT~~~~glL~~~--~~-~~~~l~l~l~~g~l~~~~ 76 (195)
.+|++.. ++.+|. +||+.|..+ ....+|+|.| ||.+++|+|||. .+ ..||++|+|.+|+|++.+
T Consensus 4 ~~c~~~~--t~~~F~~g~s~l~y~~~~~~~~~~~~~~isl~F---rT~~~~GlLly~~~~~~~~dfi~LeL~~G~l~~~~ 78 (220)
T 2r1b_A 4 LRGGHAG--TTYIFSKGGGQITYKWPPNDRPSTRADRLAIGF---STVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF 78 (220)
T ss_dssp --CCCCS--SEEEEEEEEEEEEEECCGGGCCCBSEEEEEEEE---ECCCSSEEEEEEEESTTCCCEEEEEEETTEEEEEE
T ss_pred cccCCCC--ceEEECCCCeEEEEECCCCCcccccCcEEEEEE---EeCCCCEEEEEecCCCCCCCeEEEEEECCEEEEEE
Confidence 3676644 457886 588877543 2356899999 999999999994 43 479999999999999999
Q ss_pred EcCCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCcee--ee-----------------------
Q psy6627 77 NLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFF--EL----------------------- 131 (195)
Q Consensus 77 ~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~--~l----------------------- 131 (195)
+.|++...+.. ....+|||+||+|.+.+..+.++|+||+........++... .+
T Consensus 79 ~~G~~~~~~~~-~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~l~~~~~~ip~~~~~~~~~~~~~~~ 157 (220)
T 2r1b_A 79 NVGTDDIAIEE-SNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKG 157 (220)
T ss_dssp ESSSSCEEEEC-TTCCCCSSSCEEEEEEEETTEEEEEETTSCCEEECC-----------------CHHHHHHHHHHHHHH
T ss_pred ECCCCceEEEe-CceEecCCceEEEEEEEeCCEEEEEECCcceeeeccCCCccchheecccccccccccccccccccccc
Confidence 99998777765 34679999999999999999999999996443332223211 12
Q ss_pred ------ecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcchhhHHhcCCCceeecc-ccCCCC
Q psy6627 132 ------NIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDTLKRARARSSQADAQG-KRNRTS 191 (195)
Q Consensus 132 ------~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l~~~~~~~~~~~~~~~-v~~gC~ 191 (195)
+....+||||+|. ..+|.|||+++++|++.+++++++..+.+...| |..-|.
T Consensus 158 ~~~~~~n~~~~l~lGG~p~--------~~~F~GCi~~l~ing~~vl~la~~~~~~v~~~g~v~~~~~ 216 (220)
T 2r1b_A 158 RQLTIFNSQATIIIGGKEQ--------GQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGE 216 (220)
T ss_dssp HGGGSBCCEEEEEESSTTT--------TCCCCEEEEEEEETTBCHHHHHHTTCTTEEEEEEEEECCC
T ss_pred ccceEecCCCcEEECCccC--------CCCCEEEEeEEEECCChHHhHhhcCCCCEEEeeeEEEecc
Confidence 2245799999983 379999999999999998888888777777765 555554
No 7
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.97 E-value=1.9e-29 Score=191.95 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=128.4
Q ss_pred cCCCCCcccc-cchhhhccc-------CccEEEEEEEecCCCCCCCeEEEEEcC----CCCEEEEEEECCEEEEEEEcCC
Q psy6627 13 LSNAATPTFH-KSCEKALLY-------HKELMISLLFTSPLTKRSDAILFLSAG----KIDYCLLRLESGRLKVHINLGA 80 (195)
Q Consensus 13 ~~~~~~~~F~-~sy~~~~~~-------~~~~~l~l~f~~~rT~~~~glL~~~~~----~~~~l~l~l~~g~l~~~~~~g~ 80 (195)
.+...+|+|. .||++|+.. ...+.|+|+| ||++++|+|||.++ ..||++|+|.+|++.+.++.|+
T Consensus 6 ~~~~~~~~F~g~syl~~~~~~~~~~~~~~~~~isl~f---rT~~~~GlLl~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~ 82 (189)
T 3pve_A 6 GSRPFLADFNGFSYLELKGLHTFERDLGEKMALEMVF---LARGPSGLLLYNGQKTDGKGDFVSLALHNRHLEFRYDLGK 82 (189)
T ss_dssp -CCBCCEEEESSCEEEECCGGGC-------CEEEEEE---EESSSCEEEEEEESCC-CCSCEEEEEEETTEEEEEEESSS
T ss_pred CCCceeeEECCCceEEEcCcccccccccceEEEEEEE---EeCCCCEEEEEecCCCCCCCCeEEEEEECCEEEEEEecCC
Confidence 3456789999 899999876 2468899999 99999999999975 3799999999999999999998
Q ss_pred CeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCcc--ccCCCcCcee
Q psy6627 81 GDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL--FLGHIEWLRG 158 (195)
Q Consensus 81 ~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~--~~~~~~~F~G 158 (195)
+...+.. ...++||+||+|.+.+..+.+.|+||+........++....++....+||||.|..... ......+|.|
T Consensus 83 g~~~l~s--~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~~F~G 160 (189)
T 3pve_A 83 GAAIIRS--KEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDG 160 (189)
T ss_dssp CEEEEEC--SSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSCGGGSCGGGCCCSBCEE
T ss_pred CCEEEEc--CcccCCCCEEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCchhhcccccccCCCCcE
Confidence 8766653 67999999999999999999999999976666667776667788888999999976432 1256789999
Q ss_pred EeccEEECCcch
Q psy6627 159 CLSDVIYNNIDT 170 (195)
Q Consensus 159 Ci~~v~in~~~l 170 (195)
||+++++|++.+
T Consensus 161 Ci~~v~ing~~l 172 (189)
T 3pve_A 161 AIQLVSLRGHQL 172 (189)
T ss_dssp EEEEEEETTEEC
T ss_pred EceEEEECCEEc
Confidence 999999999987
No 8
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.97 E-value=3.9e-29 Score=192.33 Aligned_cols=149 Identities=16% Similarity=0.250 Sum_probs=124.9
Q ss_pred CCcccc-cchhhhccc------------------CccEEEEEEEecCCCCCCCeEEEEEcC---CCCEEEEEEECCEEEE
Q psy6627 17 ATPTFH-KSCEKALLY------------------HKELMISLLFTSPLTKRSDAILFLSAG---KIDYCLLRLESGRLKV 74 (195)
Q Consensus 17 ~~~~F~-~sy~~~~~~------------------~~~~~l~l~f~~~rT~~~~glL~~~~~---~~~~l~l~l~~g~l~~ 74 (195)
++.+|. .||++|+.. ....+|+|+| ||.+++|+|||.++ ..||++|+|.+|++++
T Consensus 13 ~~~~F~G~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~f---rT~~~~GlLl~~g~~~~~~dfl~l~L~~G~l~~ 89 (204)
T 1pz7_A 13 EAIAFDGRTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSI---KTEATQGLILWSGKGLERSDYIALAIVDGFVQM 89 (204)
T ss_dssp CCEEEESSCCEEEECCSCCC-------CCSSCEEESEEEEEEEE---EECCSSEEEEEESCCSTTCCEEEEEEETTEEEE
T ss_pred cceeECCceeEEEcCcccccccccccccccccccceeEEEEEEE---EcCCCCeEEEEeCCCCCCCCeEEEEEECCEEEE
Confidence 456899 899999843 2468899999 99999999999975 3799999999999999
Q ss_pred EEEcCCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCcc---ccC
Q psy6627 75 HINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL---FLG 151 (195)
Q Consensus 75 ~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~---~~~ 151 (195)
.++.|++...+.+ ...+|||+||+|.+.+..+.++|.||+........++....++....+||||.|..... +..
T Consensus 90 ~~~~G~g~~~v~s--~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~ 167 (204)
T 1pz7_A 90 MYDLGSKPVVLRS--TVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERLSVAHKLPKA 167 (204)
T ss_dssp EEESSSCCEEEEE--EEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSCCSTTTTSCGG
T ss_pred EEECCCCeEEEEC--CcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCCcccccccccc
Confidence 9999988766643 67899999999999999999999999976666666666667888889999999986432 112
Q ss_pred CCcCceeEeccEEECCcch
Q psy6627 152 HIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 152 ~~~~F~GCi~~v~in~~~l 170 (195)
...+|.|||++|++|++.+
T Consensus 168 ~~~~F~GCi~~l~in~~~~ 186 (204)
T 1pz7_A 168 YSTGFIGCIRDVIVDRQEL 186 (204)
T ss_dssp GGSBCEEEEEEEEETTEEC
T ss_pred cCCCceEEEEEEEECCEEc
Confidence 4679999999999999986
No 9
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.96 E-value=7.1e-28 Score=184.09 Aligned_cols=147 Identities=21% Similarity=0.298 Sum_probs=121.7
Q ss_pred CCCcccc-cchhhhccc-------CccEEEEEEEecCCCCCCCeEEEEEcC-------CCCEEEEEEECCEEEEEEEcCC
Q psy6627 16 AATPTFH-KSCEKALLY-------HKELMISLLFTSPLTKRSDAILFLSAG-------KIDYCLLRLESGRLKVHINLGA 80 (195)
Q Consensus 16 ~~~~~F~-~sy~~~~~~-------~~~~~l~l~f~~~rT~~~~glL~~~~~-------~~~~l~l~l~~g~l~~~~~~g~ 80 (195)
...+.|. +||++|+.. .....|+|+| ||++++|+|||.+. ..||++|+|.+|++.+.++.|+
T Consensus 5 ~~~~~F~G~syl~lp~~~~~~~~~~~~~~is~~f---rT~~~~GlLl~~~~~~~~~~~~~d~l~l~L~~G~l~~~~~~G~ 81 (195)
T 3sh4_A 5 QYGAYFHDDGFLAFPGHVFSRSLPEVPETIELEV---RTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGS 81 (195)
T ss_dssp TTEEEEEEEEEEEECGGGGCCCSTTCCEEEEEEE---EECCSSEEEEEECCCTTCTTSTTCEEEEEEETTEEEEEEECSS
T ss_pred cccCEECCCEEEEEccccccccccccceEEEEEE---EeCCCCcEEEEecccccCCCCCCcEEEEEEeCCEEEEEEECCC
Confidence 3456788 899999875 2358999999 99999999999863 3799999999999999999998
Q ss_pred CeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc-cCCCcCceeE
Q psy6627 81 GDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-LGHIEWLRGC 159 (195)
Q Consensus 81 ~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~-~~~~~~F~GC 159 (195)
+...+.+ ...+|||+||+|.+.+..+.+.|+||+........++....++....+||||.|...... .....+|.||
T Consensus 82 g~~~~~s--~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~~~~~~~~~~~F~GC 159 (195)
T 3sh4_A 82 GEARLVS--EDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDVATLTGGRFSSGITGC 159 (195)
T ss_dssp CEEEEEE--EEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTHHHHTTTSCCCCCSEE
T ss_pred CcEEEEc--CceeCCCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCCcccccccccccCCEEE
Confidence 8766543 678999999999999999999999999766666677766667888889999998743211 2456899999
Q ss_pred eccEEECC
Q psy6627 160 LSDVIYNN 167 (195)
Q Consensus 160 i~~v~in~ 167 (195)
|++|++|+
T Consensus 160 i~~l~in~ 167 (195)
T 3sh4_A 160 VKNLVLHS 167 (195)
T ss_dssp EEEEEEEE
T ss_pred EEEEEECC
Confidence 99999974
No 10
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.95 E-value=4.2e-27 Score=176.14 Aligned_cols=143 Identities=21% Similarity=0.197 Sum_probs=112.7
Q ss_pred cccc-c--chhhhccc-CccEEEEEEEecCCCCCCCeEEEEEcCC--CCEEEEEEECCEEEEEEEcCCCeeEEeCCCccc
Q psy6627 19 PTFH-K--SCEKALLY-HKELMISLLFTSPLTKRSDAILFLSAGK--IDYCLLRLESGRLKVHINLGAGDTEISTPRGLR 92 (195)
Q Consensus 19 ~~F~-~--sy~~~~~~-~~~~~l~l~f~~~rT~~~~glL~~~~~~--~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~ 92 (195)
..|. . +|+.|+.. ....+++|.| ||++++|+|||.++. .||++|+|.+|+++++++.|++...+. ....
T Consensus 8 ~~F~g~s~~~l~f~~~~~~~~~is~~F---rT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~~--s~~~ 82 (170)
T 1d2s_A 8 NGPGQEPIAVMTFDLTKITKTSSSFEV---RTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVG--AGPR 82 (170)
T ss_dssp CTTCCSCSEEEEEEGGGCCCCEEEEEE---EESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEEE--CSCC
T ss_pred cCCCCCceEEEEecCCCCCceEEEEEE---EeCCCCEEEEEecCCCCCCEEEEEEeCCEEEEEEECCCceEEEe--CCCc
Confidence 4566 3 35777665 4568999999 999999999999753 799999999999999999998755553 3678
Q ss_pred CCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCcc-ccCCCcCceeEeccEEECCcch
Q psy6627 93 LDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTEL-FLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 93 i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~-~~~~~~~F~GCi~~v~in~~~l 170 (195)
+|||+||+|.+.+..+.+.|+||+.........+. +.. ..+||||+|..... ..+...+|+|||+++++|+..+
T Consensus 83 vnDG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~---l~~-~~lylGG~p~~~~~~~~~~~~~F~GCi~~l~in~~~~ 157 (170)
T 1d2s_A 83 LDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSG---HPI-MRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 157 (170)
T ss_dssp CCSSSCEEEEEEEETTEEEEEETTEEEEEETTCCC---CCE-EEEEESSCSSCGGGSSSCCCCCCCEEEEEEEESCGGG
T ss_pred cCCCCCEEEEEEEeCCEEEEEECCeeeeeeccCCC---ccc-ccEEEECcccchhhcccCCCCCeeeEeEEeEECCccc
Confidence 99999999999999999999999954433322222 222 57999999975432 1255789999999999999875
No 11
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.94 E-value=1.7e-25 Score=186.80 Aligned_cols=149 Identities=26% Similarity=0.378 Sum_probs=124.5
Q ss_pred CCcccc---cchhhhccc----CccEEEEEEEecCCCCCCCeEEEEEcCC--CCEEEEEEECCEEEEEEEcCCCeeEEeC
Q psy6627 17 ATPTFH---KSCEKALLY----HKELMISLLFTSPLTKRSDAILFLSAGK--IDYCLLRLESGRLKVHINLGAGDTEIST 87 (195)
Q Consensus 17 ~~~~F~---~sy~~~~~~----~~~~~l~l~f~~~rT~~~~glL~~~~~~--~~~l~l~l~~g~l~~~~~~g~~~~~~~~ 87 (195)
.+.+|. .||+.|+.. ...+.|+|.| ||.+++|+|||.++. .||++|+|.+|+|+++++.|++...+..
T Consensus 20 ~a~~Fg~~~~S~~~~~~~~~~~~~~~~is~~f---rT~~~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~~~~~~~ 96 (383)
T 2jd4_A 20 GAHQFGLSQNSHLVLPLQQSDVRKRLQVQLSI---RTFASSGLIYYVAHQNQMDYATLQLQEGRLHFMFDLGKGRTKVSH 96 (383)
T ss_dssp TCEECCSSTTCEEEEECCSCCCSSEEEEEEEE---EECCSCEEEEEEECTTSSSEEEEEEETTEEEEEEECSSCEEEEEC
T ss_pred cccccCCCCCeeEEEeCCchhcccceEEEEEE---EcCCCCeEEEEeCCCCCCcEEEEEEECCEEEEEEECCCCeEEEeC
Confidence 455776 699999864 4678999999 999999999999743 7999999999999999999998777664
Q ss_pred CCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc--cCCCcCceeEeccEEE
Q psy6627 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF--LGHIEWLRGCLSDVIY 165 (195)
Q Consensus 88 ~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~--~~~~~~F~GCi~~v~i 165 (195)
+..++||+||+|.+.+..+.++|.||+........++....++....+||||.|...... .....+|.|||+++++
T Consensus 97 --~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~i 174 (383)
T 2jd4_A 97 --PALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSHYRARNIGTITHSIPACIGEIMV 174 (383)
T ss_dssp --CCCCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCCEEEEEEEE
T ss_pred --cceecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcccccccccccCCCceEEeEEEEE
Confidence 578999999999999999999999999665555555666667777899999999753221 2456789999999999
Q ss_pred CCcch
Q psy6627 166 NNIDT 170 (195)
Q Consensus 166 n~~~l 170 (195)
|++.+
T Consensus 175 n~~~l 179 (383)
T 2jd4_A 175 NGQQL 179 (383)
T ss_dssp TTEEC
T ss_pred CCEEe
Confidence 99975
No 12
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.94 E-value=1.1e-25 Score=173.11 Aligned_cols=142 Identities=21% Similarity=0.228 Sum_probs=109.2
Q ss_pred chhhhccc-CccEEEEEEEecCCCCCCCeEEEEEcCC--CCEEEEEEECCEEEEEEEcCCCeeEEeCCCcccCCCCCcEE
Q psy6627 24 SCEKALLY-HKELMISLLFTSPLTKRSDAILFLSAGK--IDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHS 100 (195)
Q Consensus 24 sy~~~~~~-~~~~~l~l~f~~~rT~~~~glL~~~~~~--~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~ 100 (195)
+|+.|+.. ....+|+|.| ||++++|+|||.++. .||++|+|.+|+|+++++.|++...+. ....+|||+||+
T Consensus 28 ~y~~~~~~~~~~~~is~~f---rT~~~~GlLly~~~~~~~d~~~l~L~~G~l~~~~~~g~~~~~~~--s~~~vnDG~WH~ 102 (205)
T 1f5f_A 28 AVMTFDLTKITKTSSSFEV---RTWDPEGVIFYGDTNPKDDWFMLGLRDGRPEIQLHNHWAQLTVG--AGPRLDDGRWHQ 102 (205)
T ss_dssp EEEEEEGGGCCCCEEEEEE---EESCSSEEEEEEEEETTTEEEEEEEETTEEEEEEESSSCEEEEE--CSCCCCSSSCEE
T ss_pred EEEEECCCCCCceEEEEEE---EeCCCCEEEEEeCCCCCCCEEEEEEECCEEEEEEECCCceEEEe--cCCccCCCCCEE
Confidence 55666644 4558999999 999999999999753 699999999999999999998765553 367899999999
Q ss_pred EEEEEECCEEEEEECCcceeeEE-cCCcee-eeecCCcEEEcccCCCCcc-ccCCCcCceeEeccEEECCcch
Q psy6627 101 VNVTRIEANVTLTVDLIHTTFEK-LPGKFF-ELNIHYGLFIGGQGDFTEL-FLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 101 V~l~~~~~~~~L~vd~~~~~~~~-~~~~~~-~l~~~~~i~iGg~~~~~~~-~~~~~~~F~GCi~~v~in~~~l 170 (195)
|.+.+..+.+.|+||+....... ...+.. .......+||||+|..... ..+...+|+|||+++.+|+..+
T Consensus 103 V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG~p~~~~~~~~~~~~~F~GCi~~l~i~~~~~ 175 (205)
T 1f5f_A 103 VEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGGLLFPASNLRLPLVPALDGCLRRDSWLDKQA 175 (205)
T ss_dssp EEEEEETTEEEEEETTEEEEEECSCCCCC----CCEEEEEESSCSSCGGGSSSCCCCCCCEEEEEEECSCGGG
T ss_pred EEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCCceEEEeCccCccccccccCCCCeeEEeeeeEECCeec
Confidence 99999999999999995543332 111211 1122257999999975321 2356789999999999988864
No 13
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.93 E-value=3.1e-25 Score=185.98 Aligned_cols=147 Identities=22% Similarity=0.289 Sum_probs=121.5
Q ss_pred Ccccc---cchhhhccc----CccEEEEEEEecCCCCCCCeEEEEEcC--CCCEEEEEEECCEEEEEEEcCCCeeEEeCC
Q psy6627 18 TPTFH---KSCEKALLY----HKELMISLLFTSPLTKRSDAILFLSAG--KIDYCLLRLESGRLKVHINLGAGDTEISTP 88 (195)
Q Consensus 18 ~~~F~---~sy~~~~~~----~~~~~l~l~f~~~rT~~~~glL~~~~~--~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~ 88 (195)
+.+|. +||+.|+.. ....+|+|.| ||.+++|+|||.++ ..||++|+|.+|+|+++++.|++...+..
T Consensus 35 a~~Fg~~~~s~~~~~~~~~~~~~~~~is~~f---rT~~~~GlLly~~~~~~~dfi~l~L~~G~l~~~~~~g~g~~~~~~- 110 (394)
T 1dyk_A 35 SKQFGLSRNSHIAIAFDDTKVKNRLTIELEV---RTEAESGLLFYMARINHADFATVQLRNGFPYFSYDLGSGDTSTMI- 110 (394)
T ss_dssp CEECCSSTTCEEEEECCGGGGSSEEEEEEEE---EECCSCEEEEEEECTTSSSEEEEEEETTEEEEEEESSSCEEEEEC-
T ss_pred ceecCCCCCcEEEEEcCccccccceEEEEEE---EeCCCCeEEEEcCCCCCCceEEEEEECCEEEEEEECCCCceEEEc-
Confidence 44555 688888764 5688999999 99999999999975 37999999999999999999998777664
Q ss_pred CcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc--cCCCcCceeEeccEEEC
Q psy6627 89 RGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF--LGHIEWLRGCLSDVIYN 166 (195)
Q Consensus 89 ~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~--~~~~~~F~GCi~~v~in 166 (195)
...+|||+||+|.+.+..+.+.|.||+....... ++....++....+||||+|...... .....+|.|||+++++|
T Consensus 111 -~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~g~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~~F~GCi~~l~in 188 (394)
T 1dyk_A 111 -PTKINDGQWHKIKIVRVKQEGILYVDDASSQTIS-PKKADILDVVGILYVGGLPINYTTRRIGPVTYSLDGCVRNLHME 188 (394)
T ss_dssp -CSCCCSSSCEEEEEEEETTEEEEEETTEEEEEEC-STTCCCCCCCSEEEESSCCTTCCCCSSCSCCSBCSEEEEEEEES
T ss_pred -ccccCCCCEEEEEEEEeCCEEEEEEcCcccceec-CCCCceecCCCCEEEcccCCcccccccccCCCCccEeeeEEEEC
Confidence 5789999999999999999999999995544333 5666667777889999999754321 24567899999999999
Q ss_pred Ccch
Q psy6627 167 NIDT 170 (195)
Q Consensus 167 ~~~l 170 (195)
++.+
T Consensus 189 ~~~~ 192 (394)
T 1dyk_A 189 QAPV 192 (394)
T ss_dssp SSCC
T ss_pred CEEe
Confidence 9975
No 14
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.93 E-value=2.3e-25 Score=186.02 Aligned_cols=170 Identities=22% Similarity=0.303 Sum_probs=124.8
Q ss_pred Ccccc-cchhhhcc--c--CccEEEEEEEecCCCCCCCeEEEEEcC-CCCEEEEEEECCEEEEEEEcCCCeeEEeCC--C
Q psy6627 18 TPTFH-KSCEKALL--Y--HKELMISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTP--R 89 (195)
Q Consensus 18 ~~~F~-~sy~~~~~--~--~~~~~l~l~f~~~rT~~~~glL~~~~~-~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~--~ 89 (195)
...|. .+|+.|.. . ....+|+|.| ||++++|+|||.++ ..||++|+|.+|+|.+.++.|++...+... .
T Consensus 200 g~~F~g~sy~~~~~~~~~~~~~~~isl~f---rT~~~~GlLl~~~~~~~d~l~l~L~~G~l~~~~~~g~g~~~~~~~~~~ 276 (383)
T 2jd4_A 200 GTFFEGSGYAALVKEGYKVRLDLQITLEF---RTTSKNGVLLGISSAKVDAIGLEIVDGKVLFHVNNGAGRITATYQPRA 276 (383)
T ss_dssp SEEEEEEEEEEEEEEEECCBSCEEEEEEE---EESCSCEEEEEEECSSSCEEEEEEETTEEEEEEESSSCEEEEEECCSS
T ss_pred CceECCCeEEEEecCccccCCceEEEEEE---EeCCCCEEEEEecCCCCcEEEEEEECCEEEEEEECCCCcEEEEEecCC
Confidence 34677 79999942 2 5678999999 99999999999865 479999999999999999999876555432 2
Q ss_pred cccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc-cCCCcCceeEeccEEECCc
Q psy6627 90 GLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-LGHIEWLRGCLSDVIYNNI 168 (195)
Q Consensus 90 ~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~-~~~~~~F~GCi~~v~in~~ 168 (195)
...+|||+||+|.+.+..+.+.|.||+........++....++....+||||.|...... .....+|+|||++|++|+.
T Consensus 277 ~~~l~DG~WH~V~l~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~~ 356 (383)
T 2jd4_A 277 ARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAHIKQNSLSSRASFRGCVRNLRLSRG 356 (383)
T ss_dssp TTGGGSSSCEEEEEEEETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCCTTSCCTTCSCCCBCEEEEEEEEEC--
T ss_pred CccccCCCcEEEEEEEcCCEEEEEECCeecccccCCCCcccccCCCCEEEeccccccccCCccccCCCceEccEEEECCC
Confidence 467999999999999999999999999543332222223346666789999999864322 3556899999999999997
Q ss_pred c---hhhHHhcCCCceeeccccCC-CCCCC
Q psy6627 169 D---TLKRARARSSQADAQGKRNR-TSNSL 194 (195)
Q Consensus 169 ~---l~~~~~~~~~~~~~~~v~~g-C~~~~ 194 (195)
+ .++.... +...++..+ |...+
T Consensus 357 ~~~~~~dl~~~----~~~~gv~~~~Cp~~~ 382 (383)
T 2jd4_A 357 SQVQSLDLSRA----FDLQGVFPHSCPGPE 382 (383)
T ss_dssp -CCEECCGGGC----SEEEEEETTCEESCC
T ss_pred CcccccChhhH----HhhcCcccCCCCCCC
Confidence 5 2333221 346778777 97643
No 15
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.93 E-value=6.2e-25 Score=185.05 Aligned_cols=149 Identities=26% Similarity=0.371 Sum_probs=119.4
Q ss_pred CCcccc--cchhhhccc--CccEEEEEEEecCCCCCCCeEEEEEcCC-CCEEEEEEECCEEEEEEEcCCCeeEEeCCCcc
Q psy6627 17 ATPTFH--KSCEKALLY--HKELMISLLFTSPLTKRSDAILFLSAGK-IDYCLLRLESGRLKVHINLGAGDTEISTPRGL 91 (195)
Q Consensus 17 ~~~~F~--~sy~~~~~~--~~~~~l~l~f~~~rT~~~~glL~~~~~~-~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~ 91 (195)
.+.+|. .||++|+.. ...++++|.| ||.+++|+|||.+++ .||++|+|.+|+|++.++.|++...+......
T Consensus 6 ~~v~F~~~~Syl~~p~~~~~~~~~is~~f---rT~~~~GlLly~~~~~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~ 82 (410)
T 3asi_A 6 DPVTFKTKSSYVALATLQAYTSMHLFFQF---KTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNK 82 (410)
T ss_dssp CCEEECSTTCEEEESCCCCSSCEEEEEEE---ECSCSCEEEEEEEBSTTCEEEEEEETTEEEEEEESSSCEEEEECCCSS
T ss_pred cccEeCCCCeeEEeCCCCCCceEEEEEEE---EeCCCCeEEEEeCCCCCCEEEEEEECCEEEEEEECCCCcEEEEeccCc
Confidence 345886 799999876 5678999999 999999999998653 79999999999999999999987777644567
Q ss_pred cCCCCCcEEEEEEEECCE-EEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCc--cc--cCCCcCceeEeccEEEC
Q psy6627 92 RLDDLLWHSVNVTRIEAN-VTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTE--LF--LGHIEWLRGCLSDVIYN 166 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~~-~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~--~~--~~~~~~F~GCi~~v~in 166 (195)
.+|||+||+|.+.+..+. +.|.||+... ....++. ..++....+||||.|.... .+ .....+|.|||+++.+|
T Consensus 83 ~vnDg~WH~V~v~r~~~~~~~l~VD~~~~-~~~~~~~-~~l~~~~~lyvGG~p~~~~~~~~~~~~~~~~F~GCi~~l~in 160 (410)
T 3asi_A 83 PLNDNQWHNVMISRDTSNLHTVKIDTKIT-TQITAGA-RNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLN 160 (410)
T ss_dssp CSCSSSCEEEEEEECTTCEEEEEETTEEE-EEECTTC-CCCCBCSCEEESCCCGGGGGGSCTTCCCSSBCCEEEEEEESS
T ss_pred EeCCCCeEEEEEEEcCCceEEEEECCEec-eeccCCc-cceecCCceEECccccchhhhhhhhcccccCchhheeheeeC
Confidence 999999999999999864 7999999533 2223332 4567777899999997532 11 13457899999999999
Q ss_pred Ccch
Q psy6627 167 NIDT 170 (195)
Q Consensus 167 ~~~l 170 (195)
++.+
T Consensus 161 g~~~ 164 (410)
T 3asi_A 161 GRLP 164 (410)
T ss_dssp SCCC
T ss_pred Cccc
Confidence 9864
No 16
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.93 E-value=7.8e-25 Score=185.12 Aligned_cols=148 Identities=19% Similarity=0.321 Sum_probs=115.4
Q ss_pred Ccccc-cchhhhccc---CccEEEEEEEecCCCCCCCeEEEEEcCC--CCEEEEEEECCEEEEEEEcCCCeeEEeCCCcc
Q psy6627 18 TPTFH-KSCEKALLY---HKELMISLLFTSPLTKRSDAILFLSAGK--IDYCLLRLESGRLKVHINLGAGDTEISTPRGL 91 (195)
Q Consensus 18 ~~~F~-~sy~~~~~~---~~~~~l~l~f~~~rT~~~~glL~~~~~~--~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~ 91 (195)
..+|. .+|+.|+.. .....|+|.| ||.+++|+|||.++. .||++|+|.+|+++++++.|++...+. ...
T Consensus 42 ~~~F~g~~~~~~~f~~~~~~~~~is~~F---rT~~~~GlLly~~~~~~~df~~l~L~~G~l~~~~~~g~~~~~~~--~~~ 116 (422)
T 1h30_A 42 GRMFSGTPVIRLRFKRLQPTRLVAEFDF---RTFDPEGILLFAGGHQDSTWIVLALRAGRLELQLRYNGVGRVTS--SGP 116 (422)
T ss_dssp CC-----CCEEEECCBSSCCCCEEEEEE---EECCSSEEEEEEESCTTSEEEEEEEETTEEEEEEEETTEEEEEE--EEE
T ss_pred eeEECCCceEEEEccCCCCCceEEEEEE---EeCCCCeEEEEECCCCCCcEEEEEEECCEEEEEEECCCCcEEEe--cCc
Confidence 45777 667777543 5678999999 999999999999863 799999999999999999998754443 367
Q ss_pred cCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeee---cCCcEEEcccCCCCccc-cCCCcCceeEeccEEECC
Q psy6627 92 RLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELN---IHYGLFIGGQGDFTELF-LGHIEWLRGCLSDVIYNN 167 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~---~~~~i~iGg~~~~~~~~-~~~~~~F~GCi~~v~in~ 167 (195)
.+|||+||+|.+.+..+.++|+||+........++....++ ....+||||.|...... .+...+|.|||+++++|+
T Consensus 117 ~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~~~~~~F~GCi~~v~i~~ 196 (422)
T 1h30_A 117 VINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQPINPRLDGCMRSWNWLN 196 (422)
T ss_dssp ECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSSCCCCCCCEEEEEEEEC-
T ss_pred eecCCCCEEEEEEEcCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCcccccccccccCCCCeEEEEEeEECC
Confidence 99999999999999999999999996655555666666666 56789999999765322 255688999999999966
Q ss_pred cch
Q psy6627 168 IDT 170 (195)
Q Consensus 168 ~~l 170 (195)
..+
T Consensus 197 ~~~ 199 (422)
T 1h30_A 197 GED 199 (422)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 17
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.92 E-value=2.1e-24 Score=202.89 Aligned_cols=181 Identities=26% Similarity=0.340 Sum_probs=139.6
Q ss_pred cccccCCCCCcccc-cchhhhccc-----CccEEEEEEEecCCCCCCCeEEEEEcCCCCEEEEEEECCEEEEEEEcCCCe
Q psy6627 9 KDEALSNAATPTFH-KSCEKALLY-----HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGD 82 (195)
Q Consensus 9 ~c~~~~~~~~~~F~-~sy~~~~~~-----~~~~~l~l~f~~~rT~~~~glL~~~~~~~~~l~l~l~~g~l~~~~~~g~~~ 82 (195)
+||.......++|. .+|+.|+.. .....|+|.| ||.+++|+|||.++..||++|+|++|++.+.++.|++.
T Consensus 224 ~Ce~~~~~~~~~F~G~~~~~y~~~~~~~~~~~~~i~l~F---rT~~~~GlLl~~g~~~d~l~L~L~~G~l~l~~~lG~g~ 300 (1245)
T 3qcw_A 224 DCSQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSF---KTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGA 300 (1245)
T ss_dssp -------CCEEEECSSCEEEEECTTSCEEESEEEEEEEE---ECSCSCEEEEEECSSSEEEEEEEETTEEEEEEEESSCC
T ss_pred ccccCcccceeeeCCcEEEEEccccCcccccccEEEEEE---EeCCCCceEEEecCCCCEEEEEEECCEEEEEEEcCCCe
Confidence 45555566788999 789999865 3457899999 99999999999987799999999999999999999887
Q ss_pred eE-EeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc-cCCCcCceeEe
Q psy6627 83 TE-ISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-LGHIEWLRGCL 160 (195)
Q Consensus 83 ~~-~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~-~~~~~~F~GCi 160 (195)
.. +.......++||+||.|.+.|..+.+.|+||+........++.+..++.+..+||||+|.....+ .+...+|.|||
T Consensus 301 ~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~p~~~~~~~~~~~~~F~GCi 380 (1245)
T 3qcw_A 301 FEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL 380 (1245)
T ss_dssp EEEEECCCSSCSSSSSCEEEEEEEETTEEEEEESSSCCEEEECSSSCCCEEECSEEEESCCSSTTTSTTCCCCCCCCEEE
T ss_pred EEEEEccCCcccCCCCEEEEEEEEeCCEEEEEECCcceeeeecCCCcccccCCCCEEECCcCChhhccCCccCCCceeEe
Confidence 54 23334568999999999999999999999999666666777777778888889999999765332 35668999999
Q ss_pred ccEEECCcch----hhHHhcCCCceeecc-ccCCCCC
Q psy6627 161 SDVIYNNIDT----LKRARARSSQADAQG-KRNRTSN 192 (195)
Q Consensus 161 ~~v~in~~~l----~~~~~~~~~~~~~~~-v~~gC~~ 192 (195)
+++.+|++.+ ...++...+.....| +..+|..
T Consensus 381 ~~l~~n~~~i~l~~~~~~~~~~~~~~~~g~~~~~C~~ 417 (1245)
T 3qcw_A 381 KEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCEN 417 (1245)
T ss_dssp EEEEEEESSCEECHHHHHHSCCTTEEEESSCCCCCSC
T ss_pred eeeEECCccccccchhhhhcCCCccccCCceeecccC
Confidence 9999999875 223333333444444 5778864
No 18
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.92 E-value=4.6e-24 Score=178.89 Aligned_cols=166 Identities=19% Similarity=0.267 Sum_probs=124.5
Q ss_pred cccc-cchhhhccc---CccEEEEEEEecCCCCCCCeEEEEEcC-CCCEEEEEEECCEEEEEEEcCCCeeEEeCC--Ccc
Q psy6627 19 PTFH-KSCEKALLY---HKELMISLLFTSPLTKRSDAILFLSAG-KIDYCLLRLESGRLKVHINLGAGDTEISTP--RGL 91 (195)
Q Consensus 19 ~~F~-~sy~~~~~~---~~~~~l~l~f~~~rT~~~~glL~~~~~-~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~--~~~ 91 (195)
..|. ++|+.+... .....++|.| ||++++|+|||..+ ..+|++|+|.+|+|.+.++.|.+...+... ...
T Consensus 214 ~~F~g~gy~~~~~~~~~~~~~~is~~f---rT~~~~GlLl~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~~~~~~~ 290 (394)
T 1dyk_A 214 TYFDGTGFAKAVGGFKVGLDLLVEFEF---RTTRPTGVLLGVSSQKMDGMGIEMIDEKLMFHVDNGAGRFTAIYDAEIPG 290 (394)
T ss_dssp EEEEEEEEEECCSSBCCBSEEEEEEEE---EESCSCEEEEEEECSSSCEEEEEEETTEEEEEEESSSCCEEEEECCCSTT
T ss_pred ceeCCCceeEEcCCcccCCceEEEEEE---EeCCCCEEEEEecCCCCCEEEEEEECCEEEEEEECCCCcEEEEEecCCCc
Confidence 3566 788876533 5678999999 99999999999853 479999999999999999998876554331 257
Q ss_pred cCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccc-cCCCcCceeEeccEEECC---
Q psy6627 92 RLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELF-LGHIEWLRGCLSDVIYNN--- 167 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~-~~~~~~F~GCi~~v~in~--- 167 (195)
.++||+||+|.+.+..+.+.|.||+..............++....+||||.|...... .....+|+|||++|++|+
T Consensus 291 ~l~DG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~v~in~~~~ 370 (394)
T 1dyk_A 291 HMCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPVFVGGFPGGLNQFGLTTNIRFRGCIRSLKLTKGTG 370 (394)
T ss_dssp STTSSSCEEEEEEEETTEEEEEETTEEEEEECCCTTCCCBCCCBCCEESCCCTTCCCTTCSCCCCCEEEEEEEEEECTTS
T ss_pred cccCCceEEEEEEEeCCEEEEEECCcccccccCCCcceecccCCCEEEcCCCccccccccccCCCCceeeeEEEECCccC
Confidence 8999999999999999999999999544333222333446666789999999864322 245689999999999988
Q ss_pred --cchhhHHhcCCCceeeccccCC-CCC
Q psy6627 168 --IDTLKRARARSSQADAQGKRNR-TSN 192 (195)
Q Consensus 168 --~~l~~~~~~~~~~~~~~~v~~g-C~~ 192 (195)
+.+ +... .+...+|..| |..
T Consensus 371 ~~~~~-d~~~----a~~~~gV~~~~Cp~ 393 (394)
T 1dyk_A 371 KPLEV-NFAK----ALELRGVQPVSCPT 393 (394)
T ss_dssp CCEEC-CGGG----CSEEEEEESSEEEC
T ss_pred ccccc-chhH----hhhccCcccCCCCC
Confidence 222 2221 1346678888 863
No 19
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=99.91 E-value=1.9e-23 Score=196.40 Aligned_cols=161 Identities=22% Similarity=0.338 Sum_probs=132.0
Q ss_pred cccccccccCCCCCcccc--cchhhhccc--CccEEEEEEEecCCCCCCCeEEEEEcCC--------------CCEEEEE
Q psy6627 5 KLRVKDEALSNAATPTFH--KSCEKALLY--HKELMISLLFTSPLTKRSDAILFLSAGK--------------IDYCLLR 66 (195)
Q Consensus 5 ~~~~~c~~~~~~~~~~F~--~sy~~~~~~--~~~~~l~l~f~~~rT~~~~glL~~~~~~--------------~~~l~l~ 66 (195)
++...|+......+.+|. +||+.++.. ....+|+|+| ||.+++|+|||..+. .||++|+
T Consensus 410 ~~~~~C~~~~~~~~vsF~~~~syl~lp~~~~~~~~~is~~F---rT~~~~GlLly~~~~~~~~~~~~~~~~~~~df~~Le 486 (1245)
T 3qcw_A 410 VVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDF---RTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIE 486 (1245)
T ss_dssp SCCCCCSCCCCCCCEEECSTTCCEEECCCCCSSEEEEEEEE---ECCCSCEEEEEEECCCCSSCCSSCTTSCCCCEEEEE
T ss_pred ceeecccCCCccccceeCCCCeEEEecCCCccCceEEEEEE---EeCCCCeEEEEecCccccccccccccccCCCEEEEE
Confidence 456789877777777887 799999876 5678999999 999999999998532 4899999
Q ss_pred EECCEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCC
Q psy6627 67 LESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFT 146 (195)
Q Consensus 67 l~~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~ 146 (195)
|.+|++++.++.|++...+.. ....+|||+||+|.+.+..+.+.|.||+... ....++....++....+||||+|...
T Consensus 487 L~~G~l~l~~~~G~g~~~l~~-s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~~-~~~~~~~~~~l~~~~~lylGG~p~~~ 564 (1245)
T 3qcw_A 487 MLDGHLYLLLDMGSGTIKIKA-LQKKVNDGEWYHVDFQRDGRSGTISVNTLRT-PYTAPGESEILDLDDELYLGGLPENK 564 (1245)
T ss_dssp EETTEEEEEEESSSCEEEEES-CSSCCCSSCCEEEEEEEETTEEEEEETTEEE-EEECSSSCCCCCCCSCEEESSCCSSC
T ss_pred EeCCeEEEEEECCCCeEEEee-cccEecCCCEEEEEEEEecCEEEEEEccccc-ccccCCCcceeccCCceEEccccccc
Confidence 999999999999998766654 4678999999999999999999999999533 44455555567778889999999764
Q ss_pred ccc-c-------CCCcCceeEeccEEECCcch
Q psy6627 147 ELF-L-------GHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 147 ~~~-~-------~~~~~F~GCi~~v~in~~~l 170 (195)
... . ....+|.|||++|.||++.+
T Consensus 565 ~~~~~p~~~~~~~~~~gF~GCir~l~ing~~~ 596 (1245)
T 3qcw_A 565 AGLVFPTEVWTALLNYGYVGCIRDLFIDGQSK 596 (1245)
T ss_dssp TTCCCCTTCHHHHTTCBCCEEEEEEEETTEEE
T ss_pred ccccccccccccccccCceEEEEEEEECCEEc
Confidence 211 1 23579999999999999976
No 20
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.91 E-value=2.4e-23 Score=175.36 Aligned_cols=155 Identities=24% Similarity=0.296 Sum_probs=123.4
Q ss_pred cccc--cchhhhccc------CccEEEEEEEecCCCCCCCeEEEEEcC---CCCEEEEEEECCEEEEEEEcCCCeeEEeC
Q psy6627 19 PTFH--KSCEKALLY------HKELMISLLFTSPLTKRSDAILFLSAG---KIDYCLLRLESGRLKVHINLGAGDTEIST 87 (195)
Q Consensus 19 ~~F~--~sy~~~~~~------~~~~~l~l~f~~~rT~~~~glL~~~~~---~~~~l~l~l~~g~l~~~~~~g~~~~~~~~ 87 (195)
..|. ++|+.|..+ ....+++|.| ||.+++|+|||... ..+|++|+|.+|++.+.++.|++...+..
T Consensus 227 ~~f~~~~~~~~~~~~~~~~~~~~~~~i~l~f---rT~~~~GlLl~~~~~~~~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 303 (410)
T 3asi_A 227 YIFSKGGGQITYKWPPNDRPSTRADRLAIGF---STVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEE 303 (410)
T ss_dssp EEEEEEEEEEEEECCTTCCCCBSEEEEEEEE---ECCCSEEEEEEEEECTTCCCEEEEEEETTEEEEEEESSSSCEEEEC
T ss_pred ccccCCCceEEEecCCCCCccceeeEEEEEE---EeCCCCEEEEEEecCCCCCceEEEEEeCCEEEEEEECCCCceEEec
Confidence 4564 688887543 2346899999 99999999999853 36999999999999999999987666554
Q ss_pred CCcccCCCCCcEEEEEEEECCEEEEEECCcceeeEEcCC-ceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEEC
Q psy6627 88 PRGLRLDDLLWHSVNVTRIEANVTLTVDLIHTTFEKLPG-KFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYN 166 (195)
Q Consensus 88 ~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~~~~-~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in 166 (195)
....++||+||+|.+.+.++.+.|.||+........++ ....++....+||||.|.. .+|+|||+++++|
T Consensus 304 -~~~~l~DG~wH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~~~~~~~~lylGG~p~~--------~~F~GCi~~v~in 374 (410)
T 3asi_A 304 -SNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG--------QPFQGQLSGLYYN 374 (410)
T ss_dssp -CSCCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCCEEEEEESSTTTT--------CCCCEEEEEEEET
T ss_pred -CccCcCCCCeEEEEEEEECCEEEEEECCcceecccCCCccceeeeccceEEECCcccC--------CCCEEEEEEEEEC
Confidence 34789999999999999999999999996544433333 2223455567999999874 7999999999999
Q ss_pred CcchhhHHhcCCCceeecc
Q psy6627 167 NIDTLKRARARSSQADAQG 185 (195)
Q Consensus 167 ~~~l~~~~~~~~~~~~~~~ 185 (195)
+..+++.+....+.+...|
T Consensus 375 g~~~l~~a~~~~~~v~~~g 393 (410)
T 3asi_A 375 GLKVLNMAAENDANIAIVG 393 (410)
T ss_dssp TBCHHHHHHTTCTTEEEEE
T ss_pred CHHHHHHHhccCCCEEEEE
Confidence 9998888877667777655
No 21
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=99.91 E-value=2.1e-23 Score=183.56 Aligned_cols=165 Identities=17% Similarity=0.276 Sum_probs=125.8
Q ss_pred Ccccc-cchhhhccc---CccEEEEEEEecCCCCCCCeEEEEEcCC--CCEEEEEEECCEEEEEEEcCCCeeEEeCCCcc
Q psy6627 18 TPTFH-KSCEKALLY---HKELMISLLFTSPLTKRSDAILFLSAGK--IDYCLLRLESGRLKVHINLGAGDTEISTPRGL 91 (195)
Q Consensus 18 ~~~F~-~sy~~~~~~---~~~~~l~l~f~~~rT~~~~glL~~~~~~--~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~ 91 (195)
+.+|. .+|+.|++. .....|+|.| ||.+++|+|||.++. .||++|+|++|++++.++.|++...+... ..
T Consensus 12 ~~~F~g~~~~~y~p~~~~~~~~~isl~F---rT~~~~glLly~~~~~~~dfl~l~L~~G~l~~~~~~G~g~~~l~~~-~~ 87 (608)
T 2wjs_A 12 SVSSGGDCVRTYRPEIKKGSYNNIVVHV---KTAVADNLLFYLGSAKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYP-DL 87 (608)
T ss_dssp BCC----CEEEECCCCSCTTEEEEEEEE---EESCSCEEEEEEECSSCSCEEEEEEETTEEEEEEESSSCEEEEECC-SC
T ss_pred EEEcCCCeEEEecCCCCCcccceEEEEE---ecCCCceEEEEeCCCCCCcEEEEEEECCEEEEEEECCCCceEEeeC-Cc
Confidence 46888 789999865 6788999999 999999999999865 89999999999999999999988777653 56
Q ss_pred cCCCCCcEEEEEEEECCEEEEEECCcce---------eeEEcCCceeeeecC--CcEEEcccCCCCcccc-CCCcCceeE
Q psy6627 92 RLDDLLWHSVNVTRIEANVTLTVDLIHT---------TFEKLPGKFFELNIH--YGLFIGGQGDFTELFL-GHIEWLRGC 159 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~~~~L~vd~~~~---------~~~~~~~~~~~l~~~--~~i~iGg~~~~~~~~~-~~~~~F~GC 159 (195)
.++||+||+|.+.|..+.++|+||+... .....++....++.+ ..+||||+|.....+. ....+|.||
T Consensus 88 ~~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p~~~~~~~~~~~~~F~GC 167 (608)
T 2wjs_A 88 TIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLTGKIKKADAVRVITFTGC 167 (608)
T ss_dssp CCTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCCTTSCCCTTCCCCCCCEE
T ss_pred cccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcCccccCCcccccCCccEE
Confidence 8999999999999999999999998542 234456665556654 5699999997543332 224789999
Q ss_pred eccEEECCcchhhHHhcCCCceeeccccCCCC
Q psy6627 160 LSDVIYNNIDTLKRARARSSQADAQGKRNRTS 191 (195)
Q Consensus 160 i~~v~in~~~l~~~~~~~~~~~~~~~v~~gC~ 191 (195)
|+++.+|++.+ +..+. ....++..||.
T Consensus 168 i~~l~in~~~i-~l~~~----~~~~g~~~gC~ 194 (608)
T 2wjs_A 168 MGETYFDNKPI-GLWNF----REKEGDCKGCT 194 (608)
T ss_dssp ECCCEESSSBC-----C----CEEESCCCCC-
T ss_pred EEEEEECCEEc-ccccc----ccccCCCCCCC
Confidence 99999999986 22221 12345667775
No 22
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=99.91 E-value=1.4e-23 Score=184.68 Aligned_cols=166 Identities=21% Similarity=0.300 Sum_probs=129.1
Q ss_pred Ccccc-cchhhhccc----CccEEEEEEEecCCCCCCCeEEEEEcC--CCCEEEEEEECCEEEEEEEcCCCeeEEeCCCc
Q psy6627 18 TPTFH-KSCEKALLY----HKELMISLLFTSPLTKRSDAILFLSAG--KIDYCLLRLESGRLKVHINLGAGDTEISTPRG 90 (195)
Q Consensus 18 ~~~F~-~sy~~~~~~----~~~~~l~l~f~~~rT~~~~glL~~~~~--~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~ 90 (195)
+.+|. .||+.++.. .....|+|.| ||.+++|+|||.+. ..||++|+|.+|+|++.++.|++...+.. .
T Consensus 205 ~~~F~g~sy~~~~~~~~~~~~~~~isl~F---rT~~~~GlLl~~~~~~~~d~l~L~L~~G~l~~~~~~g~~~~~l~s--~ 279 (608)
T 2wjs_A 205 TIQFDGEGYALVSRPIRWYPNISTVMFKF---RTFSSSALLMYLATRDLKDFMSVELSDGHVKVSYDLGSGMTSVVS--N 279 (608)
T ss_dssp CEEEEEEEEEEEECCTTCBTTEEEEEEEE---EESCSEEEEEEEECTTSSSEEEEEEETTEEEEEEECSSCEEEEEE--E
T ss_pred ceEECCCcceEEeccccCCCcceEEEEEE---EeCCCCeEEEEecCCCCCceEEEEEECCEEEEEEECCCCcEEEEc--C
Confidence 57888 789988753 4678999999 99999999999953 37999999999999999999988765543 6
Q ss_pred ccCCCCCcEEEEEEEECCEEEEEECCcce-----eeEEcCCceeeee--cCCcEEEcccCCCCccc-cCCCcCceeEecc
Q psy6627 91 LRLDDLLWHSVNVTRIEANVTLTVDLIHT-----TFEKLPGKFFELN--IHYGLFIGGQGDFTELF-LGHIEWLRGCLSD 162 (195)
Q Consensus 91 ~~i~dg~wh~V~l~~~~~~~~L~vd~~~~-----~~~~~~~~~~~l~--~~~~i~iGg~~~~~~~~-~~~~~~F~GCi~~ 162 (195)
..+|||+||.|.+.+..+.+.|.||+... .....++....++ ....+||||.|...... .....+|.|||++
T Consensus 280 ~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~~~~~~~~~~F~GCi~~ 359 (608)
T 2wjs_A 280 QNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLRPEVNVKKYSGCLKD 359 (608)
T ss_dssp EECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSCCCTTCCCCCCEEEEEE
T ss_pred ccccCCceEEEEEEEecceEEEEEeccccccccccccccCCccccccccCCCceEEeccCcccccCcccccCCceEEeee
Confidence 78999999999999999999999997432 2233455444555 45789999999865422 2456799999999
Q ss_pred EEECCcchhhHHhcCCCceeeccccCCCCCC
Q psy6627 163 VIYNNIDTLKRARARSSQADAQGKRNRTSNS 193 (195)
Q Consensus 163 v~in~~~l~~~~~~~~~~~~~~~v~~gC~~~ 193 (195)
|++|++.+ +.... ....++..||...
T Consensus 360 v~in~~~~-~l~~~----~~~~~v~~gC~~~ 385 (608)
T 2wjs_A 360 IEISRTPY-NILSS----PDYVGVTKGCSLE 385 (608)
T ss_dssp EEETTEEE-CGGGC----SSCEEEEESCCCC
T ss_pred EEECCEec-Ccccc----ccccccccCCCcc
Confidence 99999986 22221 1245788899753
No 23
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.83 E-value=5.8e-21 Score=161.39 Aligned_cols=143 Identities=17% Similarity=0.065 Sum_probs=102.3
Q ss_pred cccc-cchhhhccc------------CccEEEEEEEecCCCCCCCeEEEEEcC-C--CCEEEEEEECCEE-------EEE
Q psy6627 19 PTFH-KSCEKALLY------------HKELMISLLFTSPLTKRSDAILFLSAG-K--IDYCLLRLESGRL-------KVH 75 (195)
Q Consensus 19 ~~F~-~sy~~~~~~------------~~~~~l~l~f~~~rT~~~~glL~~~~~-~--~~~l~l~l~~g~l-------~~~ 75 (195)
..|. .+|+.|+.+ ...+.++|.| ||++++|+|||... + .||++|+|.+|++ ++.
T Consensus 222 ~~F~g~s~~~~~~~~~~lp~~~~~~~~~~~~is~~f---RT~~~~GlLl~~~~~~~~~d~l~l~L~~G~le~~~~~~~l~ 298 (422)
T 1h30_A 222 SFYPGSGFAFYSLDYMRTPLDVGTESTWEVEVVAHI---RPAADTGVLFALWAPDLRAVPLSVALVDYHSTKKLKKQLVV 298 (422)
T ss_dssp EEECSSCCEEECCCCBC--------CCBCEEEEEEE---EESSSCEEEEEEEEGGGTEEEEEEEEESCC-----CCCEEE
T ss_pred ceECCCeEEEEecCccccccccccccccceEEEEEE---ecCCCCEEEEEecCCCcCCCcEEEEEEcCccccccccceEE
Confidence 4666 789888653 1367999999 99999999999862 2 5899999999987 577
Q ss_pred EEcCCCeeEEeCCCcccCCCCCcEEE--EEEEECCEEEEEECCcceeeEEc----CCcee----eeecCCcEEEcccCCC
Q psy6627 76 INLGAGDTEISTPRGLRLDDLLWHSV--NVTRIEANVTLTVDLIHTTFEKL----PGKFF----ELNIHYGLFIGGQGDF 145 (195)
Q Consensus 76 ~~~g~~~~~~~~~~~~~i~dg~wh~V--~l~~~~~~~~L~vd~~~~~~~~~----~~~~~----~l~~~~~i~iGg~~~~ 145 (195)
++.+.+. .+.. ...+|||+||.| ++.+..+. |+||+........ ++... .++....+||||.|+.
T Consensus 299 ~~~~~g~-~~~~--~~~l~DG~WH~V~~~l~~~~~~--L~vD~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lyiGG~p~~ 373 (422)
T 1h30_A 299 LAVEHTA-LALM--EIKVCDGQEHVVTVSLRDGEAT--LEVDGTRGQSEVSAAQLQERLAVLERHLRSPVLTFAGGLPDV 373 (422)
T ss_dssp EEETTEE-EEEE--ECCTTSSCCEEEEEEEETTEEE--EEETTEECEESSCHHHHHHHHHHHHHHHTSCCEEEESCCCSC
T ss_pred EEeCCee-EEEe--eecccCCCEeEeEEEEEEeccE--EEEeCCccceeechhhcccchhhhhhhhccCCceEEcccCCC
Confidence 7777764 3333 478999999999 77665544 9999854332211 11111 1345567999999985
Q ss_pred CccccCCCcCceeEeccEEECCcch
Q psy6627 146 TELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 146 ~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
.....+...+|+||| +|++|++.+
T Consensus 374 ~~~~~~~~~~F~GCi-~l~ing~~l 397 (422)
T 1h30_A 374 PVTSAPVTAFYRGCM-TLEVNRRLL 397 (422)
T ss_dssp CTTSSSCCSBCCEEE-EEEETTEEC
T ss_pred CccccCccCCccccE-EEEECCEEe
Confidence 332235567899999 799999976
No 24
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=98.65 E-value=9.1e-07 Score=69.48 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=82.2
Q ss_pred ccEEEEEEEecCCC-CCCCeEEEEEcCC---CCEEEEEEEC--CEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEEEEE
Q psy6627 33 KELMISLLFTSPLT-KRSDAILFLSAGK---IDYCLLRLES--GRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRI 106 (195)
Q Consensus 33 ~~~~l~l~f~~~rT-~~~~glL~~~~~~---~~~l~l~l~~--g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~ 106 (195)
..+.|.+.| |. ....|.||...+. ..++.|.+.. ..+.+.|....+...... ....+.||+||+|.+...
T Consensus 72 ~eFsil~tl---r~~~~~~g~LfsI~~~~g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f-~~~~L~Dg~WH~lalsV~ 147 (251)
T 1za4_A 72 KGFLLLASL---RQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSV-EEALLATGQWKSITLFVQ 147 (251)
T ss_dssp TEEEEEEEE---EECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEE-SSCCCCSSSCEEEEEEEE
T ss_pred CcEEEEEEE---EecCCCCeEEEEEEeCCCCEEEEEEEECCCCcEEEEEEEcCCCeeeEEE-ecccccCCCEEEEEEEEE
Confidence 678888888 54 4666788866433 3466665533 368888865443332332 356899999999999999
Q ss_pred CCEEEEEECCcceeeEEcCCceeee-----ecCCcEEEcccCCCCccccCCCcCceeEeccEEE
Q psy6627 107 EANVTLTVDLIHTTFEKLPGKFFEL-----NIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIY 165 (195)
Q Consensus 107 ~~~~~L~vd~~~~~~~~~~~~~~~l-----~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~i 165 (195)
+..++|.||-....+.....+...+ .....++||..... .. |.|-|+++++
T Consensus 148 ~~~VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~-------~~-F~G~lq~l~i 203 (251)
T 1za4_A 148 EDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-------DN-FQGVLQNVRF 203 (251)
T ss_dssp TTEEEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT-------CB-CCEEEEEEEE
T ss_pred CCEEEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC-------CC-CeEEeEEEEE
Confidence 9999999999776666554322222 11346788876543 24 9999999999
No 25
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=98.55 E-value=2e-06 Score=65.68 Aligned_cols=121 Identities=17% Similarity=0.163 Sum_probs=82.8
Q ss_pred ccEEEEEEEecCCC-CCCCeEEEEEcCC---CCEEEEEEE--CCEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEEEEE
Q psy6627 33 KELMISLLFTSPLT-KRSDAILFLSAGK---IDYCLLRLE--SGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRI 106 (195)
Q Consensus 33 ~~~~l~l~f~~~rT-~~~~glL~~~~~~---~~~l~l~l~--~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~ 106 (195)
.++.|.+.| |. ....|.||...+. ..++.|.+. ...+.+.|........+.. ....+.||+||++.+...
T Consensus 62 ~eFsi~~t~---r~~~~~~~~LfsI~~~~~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f-~~v~l~dg~WH~l~l~V~ 137 (209)
T 2erf_A 62 KGFLLLASL---RQMKKTRGTLLALERKDHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSV-EEALLATGQWKSITLFVQ 137 (209)
T ss_dssp TEEEEEEEE---EECTTCEEEEEEEEETTSSCEEEEEEEETTTTEEEEEEEETTEEEEEEE-SSCCCCSSSEEEEEEEEE
T ss_pred CCEEEEEEE---EcCCCCCceEEEEEcCCCCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEE-eccccCCCcEEEEEEEEE
Confidence 778888888 63 4566778755432 567777775 3468888854333222322 356799999999999999
Q ss_pred CCEEEEEECCcceeeEEcCCceeeee-c----CCcEEEcccCCCCccccCCCcCceeEeccEEE
Q psy6627 107 EANVTLTVDLIHTTFEKLPGKFFELN-I----HYGLFIGGQGDFTELFLGHIEWLRGCLSDVIY 165 (195)
Q Consensus 107 ~~~~~L~vd~~~~~~~~~~~~~~~l~-~----~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~i 165 (195)
+..++|.||-....+.....+...+. . ...+++|..... .. |.|-|+++++
T Consensus 138 ~~~v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~-------~~-F~G~lq~l~i 193 (209)
T 2erf_A 138 EDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN-------DN-FQGVLQNVRF 193 (209)
T ss_dssp TTEEEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT-------CB-CCEEEEEEEE
T ss_pred CCEEEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC-------CC-CeEEeEEEEE
Confidence 99999999997666655543222221 1 236888876543 24 9999999998
No 26
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=98.50 E-value=3e-06 Score=65.05 Aligned_cols=143 Identities=13% Similarity=0.079 Sum_probs=86.1
Q ss_pred cchhhhcc----c-CccEEEEEEEecCC-CCCCCeEEE-EEcCC-CCEEEEEEE-CC--EEEEEEEcCCCe-eEEeCCCc
Q psy6627 23 KSCEKALL----Y-HKELMISLLFTSPL-TKRSDAILF-LSAGK-IDYCLLRLE-SG--RLKVHINLGAGD-TEISTPRG 90 (195)
Q Consensus 23 ~sy~~~~~----~-~~~~~l~l~f~~~r-T~~~~glL~-~~~~~-~~~l~l~l~-~g--~l~~~~~~g~~~-~~~~~~~~ 90 (195)
.+|+.+.. + -..+.+.+++ + +....+.|| |..+. .+-+.+... ++ ...+.+..++.. ..... +
T Consensus 17 ~~yv~l~~~~~~p~l~~fTvc~wv---~~~~~~~~~lfSy~~~~~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~~--~ 91 (217)
T 3flp_A 17 PKFPHLRFMQTLPAVRQLTVCQRI---KPFHRNTGYIFSCATSNQDNQFITSMYVKSDGTLNLGLQVNASSNKYISC--P 91 (217)
T ss_dssp TBCCEEEESSCBCCBSEEEEEEEE---EESCSSCEEEEEEEETTEEEEEEEEEEECTTSEEEEEEEETTCCCEEEEE--E
T ss_pred CCEEEEecCCCCCCCccEEEEEEE---EecCCCCeeEEEEECCCCCceEEEEEeCCCCcceEEEEEECCccceeEEc--c
Confidence 46787764 2 4678899999 6 334566777 44443 345555554 33 333444443322 22222 4
Q ss_pred ccCCCCCcEEEEEEEEC--CEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCc
Q psy6627 91 LRLDDLLWHSVNVTRIE--ANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNI 168 (195)
Q Consensus 91 ~~i~dg~wh~V~l~~~~--~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~ 168 (195)
..+.+|+||+|.+.+.. +.+.|.||+..............+.....+.||...+...........|.|.|.++++=++
T Consensus 92 ~~~~~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~~~~gg~f~~~~~f~G~i~~v~iw~~ 171 (217)
T 3flp_A 92 IEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQDKIGGGFEEQESWSGELSDLQVWDE 171 (217)
T ss_dssp EECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCCSBTTBCCCGGGCCCEEEEEEEEESS
T ss_pred cccCCCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcccCCCCccCCCCceEEEEeeEEEECc
Confidence 57899999999999986 6899999995543322211112234445688887554321111234789999999999665
Q ss_pred ch
Q psy6627 169 DT 170 (195)
Q Consensus 169 ~l 170 (195)
.|
T Consensus 172 aL 173 (217)
T 3flp_A 172 AL 173 (217)
T ss_dssp CC
T ss_pred cC
Confidence 55
No 27
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=98.44 E-value=1.9e-05 Score=58.99 Aligned_cols=132 Identities=11% Similarity=0.063 Sum_probs=92.1
Q ss_pred CccEEEEEEEecCCCCCCCe-EEEEEcCC---CCEEEEEEECCEEEEEEEcCCCeeE--EeCCCcccCCCCCcEEEEEEE
Q psy6627 32 HKELMISLLFTSPLTKRSDA-ILFLSAGK---IDYCLLRLESGRLKVHINLGAGDTE--ISTPRGLRLDDLLWHSVNVTR 105 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~~~g-lL~~~~~~---~~~l~l~l~~g~l~~~~~~g~~~~~--~~~~~~~~i~dg~wh~V~l~~ 105 (195)
-.+..|.++| |+..+.. -||.+... ..|+.|.|.+|.+.+.+....+... .........++ +||+|.+..
T Consensus 39 L~~gTI~v~f---ks~~~~~q~LfSIsN~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~~-~wntvaf~~ 114 (191)
T 2v73_A 39 LEEGTIVTRF---NMNDTSIQSLIGLSDGNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNR-GINTLALKI 114 (191)
T ss_dssp CSSEEEEEEE---EECCCSCEEEEEEECTTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCCS-SCEEEEEEE
T ss_pred cCCcEEEEEE---ecCCCcceEEEEccCCCCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecCC-ceEEEEEEE
Confidence 3678899999 7766332 46766543 7999999999999999986433212 22222344444 999999999
Q ss_pred EC-CEEEEEECCcceeeEEcC--CceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcchh
Q psy6627 106 IE-ANVTLTVDLIHTTFEKLP--GKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDTL 171 (195)
Q Consensus 106 ~~-~~~~L~vd~~~~~~~~~~--~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l~ 171 (195)
+. ...+|.+|+....+...+ ..+..+ -...+.||+...... ....+|.|-|..+.+=+++|-
T Consensus 115 d~~~~~~ly~NG~~V~t~~~~~~~fi~~i-~ln~~~IG~~~r~sg---~~~y~F~G~Id~~~iYn~aLs 179 (191)
T 2v73_A 115 EKGIGAKIFLNGSLVKTVSDPNIKFLNAI-NLNSGFIGKTDRANG---YNEYLFRGNIDFMNIYDKPVS 179 (191)
T ss_dssp ETTTEEEEEETTEEEEEEECTTCCCGGGS-CCCEEEESSCCCCSS---SCCCCCCEEEEEEEEESSCCC
T ss_pred cCCccEEEEECCEEEEEEecccccceeec-CCceEEEcceeecCC---ceeeccCCeEEEEEEEcCcCC
Confidence 86 599999999766555443 233444 334799999876521 234789999999999777763
No 28
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=98.43 E-value=9.1e-06 Score=61.78 Aligned_cols=138 Identities=9% Similarity=-0.024 Sum_probs=85.1
Q ss_pred cchhhhccc----CccEEEEEEEecCCCCC-CCeEEEEE-cCC-CCEEEEEE-ECCEEEEEEEcCCCeeEEeCCCcccCC
Q psy6627 23 KSCEKALLY----HKELMISLLFTSPLTKR-SDAILFLS-AGK-IDYCLLRL-ESGRLKVHINLGAGDTEISTPRGLRLD 94 (195)
Q Consensus 23 ~sy~~~~~~----~~~~~l~l~f~~~rT~~-~~glL~~~-~~~-~~~l~l~l-~~g~l~~~~~~g~~~~~~~~~~~~~i~ 94 (195)
.+|+.+... -..+.+.+++ +|.. ..+.||.. .+. ..-+.+.. ..+.+.+.+ ++....+ ..+++
T Consensus 17 ~~yv~l~~~~~~~l~~fTvc~wv---~~~~~~~~tlfSy~~~~~~nel~l~~~~~~~~~l~i--~g~~~~~----~~~~~ 87 (204)
T 3kqr_A 17 TDHVNLITPLEKPLQNFTLCFRA---YSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYI--GRHKVTS----KVIEK 87 (204)
T ss_dssp SCEEEEECCCCSCBSEEEEEEEE---ECCCCSCEEEEEEEETTEEEEEEEEEEETTEEEEEE--TTEEEEE----ECCCC
T ss_pred CCEEEEeCCCCCCcCCEEEEEEE---EeCCCCCeEEEEEECCCCCceEEEEEcCCCeEEEEE--CCeEEEE----ecccC
Confidence 467777643 4678899999 7654 56677744 333 22333333 456666555 3322222 25688
Q ss_pred CCCcEEEEEEEEC--CEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 95 DLLWHSVNVTRIE--ANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 95 dg~wh~V~l~~~~--~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
||+||+|.+.+.. +.+.|.||+......... .-..+.....+.||.-.+...........|.|-|.++.+=++.|
T Consensus 88 ~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~-~g~~i~~~g~l~lGq~qd~~gg~f~~~~~f~G~i~~v~iW~~aL 164 (204)
T 3kqr_A 88 FPAPVHICVSWESSSGIAEFWINGTPLVKKGLR-QGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMWDSVL 164 (204)
T ss_dssp SSCCEEEEEEEETTTCEEEEEETTEECCCEECC-TTCCBCSSCEEEESSCCSSSSCCCCGGGCCCEEEEEEEEESSCC
T ss_pred CCceEEEEEEEECCCCeEEEEECCEEeeeeccC-CCCEECCCcEEEEcccccCCCCCcCcccceeEEEeeEEEECccC
Confidence 9999999999985 589999999544332211 11123445568888765542212233478999999999955554
No 29
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=98.34 E-value=9.1e-06 Score=61.84 Aligned_cols=138 Identities=13% Similarity=0.037 Sum_probs=85.0
Q ss_pred cchhhhccc----CccEEEEEEEecCCCCC---CCeEEEEE-cCC-CCEEEEEEE-CCEEEEEEEcCCCeeEEeCCCccc
Q psy6627 23 KSCEKALLY----HKELMISLLFTSPLTKR---SDAILFLS-AGK-IDYCLLRLE-SGRLKVHINLGAGDTEISTPRGLR 92 (195)
Q Consensus 23 ~sy~~~~~~----~~~~~l~l~f~~~rT~~---~~glL~~~-~~~-~~~l~l~l~-~g~l~~~~~~g~~~~~~~~~~~~~ 92 (195)
.+|+.+... -..+.+.+++ +|.. ..+.||.. .+. ..-+.+... .|.+.+.+ ++....+ ..+
T Consensus 17 ~~yv~l~~~~~~~l~~fTvc~wv---~~~~~~~~~~~lfSy~~~~~~n~l~l~~~~~g~~~l~i--~g~~~~~----~~~ 87 (206)
T 3pvn_A 17 TSYVSLKAPLTKPLKAFTVCLHF---YTELSSTRGYSIFSYATKRQDNEILIFWSKDIGYSFTV--GGSEILF----EVP 87 (206)
T ss_dssp SCEEEECCCCCSCBSEEEEEEEE---EESGGGTCCEEEEEEEETTEEEEEEEEEETTTEEEEEE--TTEEEEE----ECS
T ss_pred CCEEEEecCCCCCcCCEEEEEEE---EecCCCCCcEEEEEEEcCCCCCEEEEEEcCCCeEEEEE--CCeEEEE----ecc
Confidence 367777643 4668899999 7764 46777744 333 223444443 56666555 3322222 246
Q ss_pred CCCCCcEEEEEEEEC--CEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 93 LDDLLWHSVNVTRIE--ANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 93 i~dg~wh~V~l~~~~--~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
+.+|+||+|.+.+.. +.+.|.||+......... ....+.....+.||.-.+...........|.|-|.++++=+..|
T Consensus 88 ~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~-~g~~i~~~g~l~lGq~qd~~gg~f~~~~~f~G~i~~v~iw~~aL 166 (206)
T 3pvn_A 88 EVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLK-KGYTVGAEASIILGQEQDSFGGNFEGSQSLVGDIGNVNMWDFVL 166 (206)
T ss_dssp SCCSSCEEEEEEEETTTCEEEEEETTEECCCEECC-TTCCBCSSCEEEESSCCSBTTBCCCGGGCCCEEEEEEEEESSCC
T ss_pred CCCCceEEEEEEEECCCCeEEEEECCEEccccccc-CCcEECCCCEEEEccccccCCCCcCCccceEEEEeeEEEECccC
Confidence 789999999999985 589999999544332221 11123445678888655432111223478999999999965554
No 30
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=98.24 E-value=6.4e-05 Score=58.69 Aligned_cols=129 Identities=12% Similarity=0.036 Sum_probs=82.4
Q ss_pred CccEEEEEEEecCC-CCCCCeEEEEEcCC--CCEEEEEEE--CCEEEEEEEcCCCeeEE-eCCCcccCCCCCcEEEEEEE
Q psy6627 32 HKELMISLLFTSPL-TKRSDAILFLSAGK--IDYCLLRLE--SGRLKVHINLGAGDTEI-STPRGLRLDDLLWHSVNVTR 105 (195)
Q Consensus 32 ~~~~~l~l~f~~~r-T~~~~glL~~~~~~--~~~l~l~l~--~g~l~~~~~~g~~~~~~-~~~~~~~i~dg~wh~V~l~~ 105 (195)
..++.|.+.|+.++ +......||...+. ..++.|.+. ...+.+.+....+.... .......+.||+||+|.+..
T Consensus 85 p~eFsil~tlr~~~~~~~~~~~L~sI~d~~~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklalsV 164 (245)
T 2uur_A 85 PEEYSFLTTFRMTGSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIGV 164 (245)
T ss_dssp CSSEEEEEEEECCGGGGGCEEEEEEEECTTSCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEEEE
T ss_pred CCCEEEEEEEEcCCCCCCcceEEEEEECCCCcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEEEE
Confidence 46778888883222 22233447766543 457777776 34577777554443332 22111258999999999999
Q ss_pred ECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECC
Q psy6627 106 IEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNN 167 (195)
Q Consensus 106 ~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~ 167 (195)
.+..++|.||=....+...... ..+.....++||-..... ...|.|=|+.+.|--
T Consensus 165 ~~~~VtLyvDC~~~~~~~l~~~-~~i~~~G~~~lG~~~~~~------~~~f~g~lQ~l~i~~ 219 (245)
T 2uur_A 165 ERSSATLFVDCNRIESLPIKPR-GPIDIDGFAVLGKLADNP------QVSVPFELQWMLIHC 219 (245)
T ss_dssp ETTEEEEEETTEEEEEEECCCB-CCCCCSSEEEEEEESSCT------TCBCCEEEEEEEEES
T ss_pred ECCEEEEEEecCcccccccCCC-CccccCCEEEEEEecCCC------CCceEEEeEEEEEEc
Confidence 9999999999866555544322 345566778888763321 137999999999833
No 31
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=98.21 E-value=3e-05 Score=63.79 Aligned_cols=141 Identities=15% Similarity=0.101 Sum_probs=86.7
Q ss_pred CCCCcccccchhhhccc----CccEEEEEEEecCCCCCCCeEEEEEcCCCCEEEEEEE--------CCEEEEEEEcCCCe
Q psy6627 15 NAATPTFHKSCEKALLY----HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLE--------SGRLKVHINLGAGD 82 (195)
Q Consensus 15 ~~~~~~F~~sy~~~~~~----~~~~~l~l~f~~~rT~~~~glL~~~~~~~~~l~l~l~--------~g~l~~~~~~g~~~ 82 (195)
...++.|.+.|+..+.. ...+.++++|++..+. ....||-. + ..+.+.+. .++|++. .+ +
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~T~eawv~~~~~~-~~~ti~g~--e-~~~~lr~gd~~~g~~~~~~Lq~~--~~-~- 210 (355)
T 4dqa_A 139 ITKAGNFSNHYISVKFPVGTFFSSFTYEALINVDYFL-DNNTIMGT--E-GVMILRIGDAGGGITPKDYLEVA--GG-Q- 210 (355)
T ss_dssp CCEEEEEESCCEEECCCTTCCBSSEEEEEEEEESCCC-SSEEEEEE--T-TTEEEEEEEGGGTSEEEEEEEEE--ES-S-
T ss_pred EEecceecCCEEEcccCCCCCCCcEEEEEEEECCcCC-CcceEEeC--C-CeEEEEEecCCCCCCcCCeEEEe--cC-C-
Confidence 33456666666665433 4678899999444433 34455532 2 34455553 3345553 23 2
Q ss_pred eEEeCCCcccCCCCCcEEEEEEEE--CCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEe
Q psy6627 83 TEISTPRGLRLDDLLWHSVNVTRI--EANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCL 160 (195)
Q Consensus 83 ~~~~~~~~~~i~dg~wh~V~l~~~--~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi 160 (195)
.+.. ...+.+|+||+|.+.+. .+.++|.||+..............+.....++||+..... .....|.|.|
T Consensus 211 -~~~s--~~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~~~~----~~~~~f~G~I 283 (355)
T 4dqa_A 211 -NYRV--TKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIYGFK----WGERPFHGKM 283 (355)
T ss_dssp -CEEC--SSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCTTCT----TCCCCCEEEE
T ss_pred -cccc--CCcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCCCCC----CCCcceeEEE
Confidence 2222 45799999999999999 7899999999655444432211111223569999865421 0247899999
Q ss_pred ccEEECCcch
Q psy6627 161 SDVIYNNIDT 170 (195)
Q Consensus 161 ~~v~in~~~l 170 (195)
.++++=++.+
T Consensus 284 devrIw~~aL 293 (355)
T 4dqa_A 284 SEVRVWSVAR 293 (355)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEECCcC
Confidence 9999977765
No 32
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=96.87 E-value=0.02 Score=50.85 Aligned_cols=129 Identities=11% Similarity=0.080 Sum_probs=81.8
Q ss_pred ccEEEEEEEecCCCCCCC--eEEEEEcCC-----CCEEEEEEE-CCEEEEEEEcCCC--eeEEeCCCcccCC---CC--C
Q psy6627 33 KELMISLLFTSPLTKRSD--AILFLSAGK-----IDYCLLRLE-SGRLKVHINLGAG--DTEISTPRGLRLD---DL--L 97 (195)
Q Consensus 33 ~~~~l~l~f~~~rT~~~~--glL~~~~~~-----~~~l~l~l~-~g~l~~~~~~g~~--~~~~~~~~~~~i~---dg--~ 97 (195)
....|.|+| ++.... ..||.+.+. ..|+.+.|. +|.+.+.+...++ ...... +..+. .| .
T Consensus 35 ~~~Ti~~~~---~~~~~~~~~~lfs~s~~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~~ 109 (679)
T 2sli_A 35 TQGTIILSY---KSTSENGIQSLFSVGNSTAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDR--PASVRALYKGERV 109 (679)
T ss_dssp SSEEEEEEE---EECCCCSEEEEEEEECCSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEE--SSCCCSEETTEEC
T ss_pred cCeEEEEEE---EcCCCCCceEEEEeecCCccccCcceEEEEcCCCeEEEEEecCCCCeeeeccc--ccccccccCCCce
Confidence 678899999 665433 256666543 379999998 5778777665433 233222 22333 24 6
Q ss_pred cEEEEEEEE--CCEEEEEECCcceeeEEcCC-c-eeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 98 WHSVNVTRI--EANVTLTVDLIHTTFEKLPG-K-FFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 98 wh~V~l~~~--~~~~~L~vd~~~~~~~~~~~-~-~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
|++|.+... .+.++|.||+....+..... . +..+.-...+.||+..... .....|.|-|.++.|-..+|
T Consensus 110 ~~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~~~~g----~~~~~f~G~i~~~~iy~~~L 182 (679)
T 2sli_A 110 FNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGTKRQG----KIAYPFGGTIGDIKVYSNAL 182 (679)
T ss_dssp CEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETT----EEESCCCEEEEEEEEESSCC
T ss_pred eEEEEEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeeeecCC----ceeccccceEeEEEEeCCCC
Confidence 999999998 57999999996555444331 1 1222223578999952211 11236999999999977765
No 33
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=96.85 E-value=0.096 Score=43.67 Aligned_cols=128 Identities=9% Similarity=0.058 Sum_probs=79.0
Q ss_pred CccEEEEEEEecCCCC-C-----CCe--EEEEEc-CC----CCEEEEEEECCEEEEEEEcCCCeeE---EeCCCcccCC-
Q psy6627 32 HKELMISLLFTSPLTK-R-----SDA--ILFLSA-GK----IDYCLLRLESGRLKVHINLGAGDTE---ISTPRGLRLD- 94 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~-~-----~~g--lL~~~~-~~----~~~l~l~l~~g~l~~~~~~g~~~~~---~~~~~~~~i~- 94 (195)
...+.|+|+++.|++. . .++ .|+-.- .. ..-..+.|.++.+.+.+.-.++... ... .+..+.
T Consensus 84 t~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~~n~~s~nsGW~I~l~gn~liw~l~Dsng~~~~i~f~~-~~~~Isd 162 (452)
T 1a8d_A 84 FNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMKKHSLSIGSGWSVSLKGNNLIWTLKDSAGEVRQITFRD-LPDKFNA 162 (452)
T ss_dssp TSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCEECGGGCEEEEEEEEETTEEEEEEECTTSCEEEEEEEC-CSBTTSC
T ss_pred CCceEEEEEEECCCcCcccccccccCcceEEeeeccccccCCCCeEEEeCCCeEEEEEEcCCCceeeEEecc-ccccCcc
Confidence 3589999999444431 1 222 333111 11 2246677888899988875443322 221 234444
Q ss_pred --CCCcEEEEEEEE-CCEEEEEECCcceeeEEcCCceeeeecCCcEEEc--ccCCCCccccCCCcCceeEeccEEECCcc
Q psy6627 95 --DLLWHSVNVTRI-EANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIG--GQGDFTELFLGHIEWLRGCLSDVIYNNID 169 (195)
Q Consensus 95 --dg~wh~V~l~~~-~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iG--g~~~~~~~~~~~~~~F~GCi~~v~in~~~ 169 (195)
+|+||+|+++.. .+...+.+||....+....+- ..+.....+-+| +.++ .++.|+|.++.+=.++
T Consensus 163 ~~~nkW~fVtItvDR~g~~~IYING~Lv~s~~It~l-G~I~ss~~i~~gi~~~~d---------~~~~~~IDef~Iynk~ 232 (452)
T 1a8d_A 163 YLANKWVFITITNDRLSSANLYINGVLMGSAEITGL-GAIREDNNITLKLDRCNN---------NNQYVSIDKFRIFCKA 232 (452)
T ss_dssp SSSSSCEEEEEEECTTSEEEEEETTEEEEEEECTTC-CCCCCCSEEEEEEESCCC---------TTCEEEEEEEEEESSC
T ss_pred ccCCeEEEEEEEECCCCCEEEEECCEEeeccchhhc-cceeecCeEEEEEcccCC---------CcccceEeeEEEeccc
Confidence 699999999998 577799999976666655432 233333444554 4443 4577899999997776
Q ss_pred h
Q psy6627 170 T 170 (195)
Q Consensus 170 l 170 (195)
|
T Consensus 233 L 233 (452)
T 1a8d_A 233 L 233 (452)
T ss_dssp C
T ss_pred C
Confidence 6
No 34
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=96.76 E-value=0.052 Score=48.27 Aligned_cols=131 Identities=14% Similarity=0.098 Sum_probs=83.6
Q ss_pred CccEEEEEEEecCCCCCCC--eEEEEEcCC-----CCEEEEEEE-CCEEEEEEEcCCC--eeEEeCCCcccCC---CC--
Q psy6627 32 HKELMISLLFTSPLTKRSD--AILFLSAGK-----IDYCLLRLE-SGRLKVHINLGAG--DTEISTPRGLRLD---DL-- 96 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~~~--glL~~~~~~-----~~~l~l~l~-~g~l~~~~~~g~~--~~~~~~~~~~~i~---dg-- 96 (195)
.....+.++| ++.... -.||...+. ..|+.+.|. +|.+.+.+.-..+ ...... +..+. .|
T Consensus 56 ~~~~T~~~~~---~~~~~~~~~~lfs~sn~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~--~~~~~~~~~~~~ 130 (686)
T 2jkb_A 56 GESQTVVMKF---KADKPNSLQALFGLSNSKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSR--PASLWGKHKGQA 130 (686)
T ss_dssp SSCEEEEEEE---ECSSCCSEEEEEEEECCSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEE--SSCCCCEETTEE
T ss_pred cCceEEEEEE---EccCCCCeeEEEEeecCcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccc--cccccccccCCc
Confidence 3678999999 665433 256655433 478999997 8888888775544 223322 22333 34
Q ss_pred CcEEEEEEEE--CCEEEEEECCcceeeEEcCC--ceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcchh
Q psy6627 97 LWHSVNVTRI--EANVTLTVDLIHTTFEKLPG--KFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDTL 171 (195)
Q Consensus 97 ~wh~V~l~~~--~~~~~L~vd~~~~~~~~~~~--~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l~ 171 (195)
.|++|.+..+ .+.++|.||+....+..... .+..+.-...+.||+...... ....|.|-|.+++|-..+|-
T Consensus 131 ~~~~va~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~~~~g~----~~~~f~G~id~~~iy~~~Ls 205 (686)
T 2jkb_A 131 VENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAVNREGK----EHYLAKGSIDEISLFNKAIS 205 (686)
T ss_dssp CCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSEEETTE----EESCCEEEEEEEEEESSCCC
T ss_pred ceeEEEEEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeecccccCCc----ccccccceEeEEEEecCCCC
Confidence 7999999998 67999999996554444321 111122224688998432211 12369999999999777773
No 35
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=96.45 E-value=0.056 Score=39.93 Aligned_cols=84 Identities=11% Similarity=0.022 Sum_probs=54.8
Q ss_pred CccEEEEEEEecCCCCC-----CCeEEEEE-cCCCCEEEEEEEC--CEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEE
Q psy6627 32 HKELMISLLFTSPLTKR-----SDAILFLS-AGKIDYCLLRLES--GRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNV 103 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~-----~~glL~~~-~~~~~~l~l~l~~--g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l 103 (195)
...+.+++.+ +... ..|++|.. .+...+-.+.|.. +.+.+.-..+.....+.. .+..+..|+||++.|
T Consensus 63 ~~Df~le~dv---k~~~~~~~g~~Gi~fR~~~d~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~-~~~~~~~g~w~~l~I 138 (185)
T 4b1m_A 63 GSDFTYESDI---TIKDGNGRGAGALMFRSDKDAKNGYLANVDAKHDLVKFFKFENGAASVIAE-YKTPIDVNKKYHLKT 138 (185)
T ss_dssp ESSEEEEEEE---EEEEEEEEEEEEEEEEECTTSSSEEEEEEETTTTEEEEEEEETTEEEEEEE-EECCCCSSCCEEEEE
T ss_pred ccCEEEEEEE---EEcCCCCcceEEEEEEEcCCCCCcEEEEEECCCCEEEEEEEeCCcEEEeee-ccccCCCCCeEEEEE
Confidence 3556677777 4433 34788877 3446777788875 455543222322223322 235788899999999
Q ss_pred EEECCEEEEEECCcce
Q psy6627 104 TRIEANVTLTVDLIHT 119 (195)
Q Consensus 104 ~~~~~~~~L~vd~~~~ 119 (195)
...+..+++.||+...
T Consensus 139 ~~~G~~i~~~vnG~~v 154 (185)
T 4b1m_A 139 EAEGDRFKIYLDDRLV 154 (185)
T ss_dssp EEETTEEEEEETTEEE
T ss_pred EEECCEEEEEECCEEE
Confidence 9999999999999543
No 36
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=93.92 E-value=4.1 Score=37.96 Aligned_cols=130 Identities=8% Similarity=-0.041 Sum_probs=81.0
Q ss_pred CccEEEEEEEecCCCCCCC-----eEEE-EEcCCCCEEEEEEECCEEEEEEEcCCCeeE---EeCCCcccCC--CCCcEE
Q psy6627 32 HKELMISLLFTSPLTKRSD-----AILF-LSAGKIDYCLLRLESGRLKVHINLGAGDTE---ISTPRGLRLD--DLLWHS 100 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~~~-----glL~-~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~---~~~~~~~~i~--dg~wh~ 100 (195)
...+.++||.+.|+-.... -.++ .... ..=..|.+.++.+.+.+.-.+|... ........+. -++||.
T Consensus 937 ~~nFSIsFWvRipk~~~~~~~~neyTIIg~~~n-NsGW~Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~f 1015 (1295)
T 2nyy_A 937 YENFSTSFWIRIPKYFNSISLNNEYTIINCMEN-NSGWKVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIF 1015 (1295)
T ss_dssp TSEEEEEEEEECCCCCSGGGGGCCEEEEEEEET-TEEEEEEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEE
T ss_pred cCceEEEEEEEcCCcccccccCCcceEEEeecC-CCCcEEEECCCeEEEEEecCCCccceEEEecccccchhhccCceEE
Confidence 3578899999665543333 3555 3322 2337788899998888874443322 2211223333 379999
Q ss_pred EEEEEE-CCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 101 VNVTRI-EANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 101 V~l~~~-~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
|+++.. .+...+.|||.........+. ..+.+...+-+|-.... ...+.++|+++++=+++|
T Consensus 1016 VTITndRlgna~IYINGkLi~~~~I~~l-~nI~~sd~Isfk~~g~n-------D~~~~i~Id~l~IfnkeL 1078 (1295)
T 2nyy_A 1016 VTITNNRLNNSKIYINGRLIDQKPISNL-GNIHASNNIMFKLDGCR-------DTHRYIWIKYFNLFDKEL 1078 (1295)
T ss_dssp EEEEEETTSEEEEEETTEEEEEEECTTC-CCCCCCSEEEEEEESCC-------CTTCEEEEEEEEEESSCC
T ss_pred EEEEEcCCCceeEEECCEEeecceeccc-CCcccCceEEEEeccCC-------CCccceeEeeEEEecCcC
Confidence 999998 678899999977766665433 22334444555422222 146899999999966665
No 37
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=91.80 E-value=3.9 Score=37.27 Aligned_cols=91 Identities=11% Similarity=0.088 Sum_probs=61.4
Q ss_pred CccEEEEEEEecCCCCCCCeEEEEEcCCCCEEEEEEECCEEEEEEEcCCCeeE-EeCCCcccCCCCCcEEEEEEEE--CC
Q psy6627 32 HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTE-ISTPRGLRLDDLLWHSVNVTRI--EA 108 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~~~glL~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~-~~~~~~~~i~dg~wh~V~l~~~--~~ 108 (195)
...+.++|+.+.|+-....-.++-.-....=..+.+.++.+.+.+.-.+|... +-. ..+.+++||.|+++.. +.
T Consensus 901 tnnFSISFWVRipk~~~~eyTIIg~~~nNsGW~ISf~~n~LIWtl~DsnGn~knI~f---~dy~~NkWyfITISvDRLGn 977 (1196)
T 3v0a_B 901 TNSFSIYFWLRNLGKDTIKSKLIGSKEDNCGWEIYFQDTGLVFNMIDSNGNEKNIYL---SDVSNNSWHYITISVDRLKE 977 (1196)
T ss_dssp SCCEEEEEEEEECCCCCSCEEEEEEEETTEEEEEEEETTEEEEEEECTTCCEEEEEE---CSCCSSSCEEEEEEEETTTT
T ss_pred ccceEEEEEEEcCCcCCccceEEEeecCCCCcEEEECCCeEEEEEEcCCCcccceEe---ccccCCcEEEEEEEEcCCCc
Confidence 35788999997666555556666332222337788899999988874444333 222 2677789999998887 34
Q ss_pred EEEEEECCcceeeEEcC
Q psy6627 109 NVTLTVDLIHTTFEKLP 125 (195)
Q Consensus 109 ~~~L~vd~~~~~~~~~~ 125 (195)
.+.+.|||.........
T Consensus 978 alkIYINGkLv~~~sI~ 994 (1196)
T 3v0a_B 978 QLLIFIDDNLVANESIK 994 (1196)
T ss_dssp EEEEEETTEEEEEEECT
T ss_pred eeEEEECCEEeechhhh
Confidence 55999999766666543
No 38
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=89.22 E-value=14 Score=34.48 Aligned_cols=130 Identities=10% Similarity=0.021 Sum_probs=78.6
Q ss_pred CccEEEEEEEecCCC-----C---CCCeEEE-EEcCCCCEEEEEEECCEEEEEEEcCCCeeE---EeCCCcccCC--CCC
Q psy6627 32 HKELMISLLFTSPLT-----K---RSDAILF-LSAGKIDYCLLRLESGRLKVHINLGAGDTE---ISTPRGLRLD--DLL 97 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT-----~---~~~glL~-~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~---~~~~~~~~i~--dg~ 97 (195)
...+.++|+.+.|+- + ..+-.++ .... ..=..+.+.++.+.+.+.-.+|... ........+. -++
T Consensus 922 ~~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~n-NsGW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyiNk 1000 (1290)
T 1epw_A 922 FLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMKN-NSGWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINR 1000 (1290)
T ss_dssp SCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEET-TEEEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSSTTS
T ss_pred ccceeEEEEEEcCCccccccccccCCCceEEEEecC-CCCcEEEECCCeEEEEEecCCCcceeEEEecccccchhhccCc
Confidence 357889999944332 0 1114555 3322 2337888899998887764333222 2211223333 379
Q ss_pred cEEEEEEEECCEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 98 WHSVNVTRIEANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 98 wh~V~l~~~~~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
||.|+++...+.+.+.+||.........+.. ...+...+-+|-.... ...+.|+|+++.+=+++|
T Consensus 1001 W~fVTItndlg~~~IYING~Li~~~~I~~L~-dI~ss~~I~fglvn~~-------D~~~~i~Id~f~IfnkeL 1065 (1290)
T 1epw_A 1001 WFFVTITNNLNNAKIYINGKLESNTDIKDIR-EVIANGEIIFKLDGDI-------DRTQFIWMKYFSIFNTEL 1065 (1290)
T ss_dssp CEEEEEEECSSEEEEEETTEEEEEEECSSCC-CCCCCSEEEEEEEESC-------CTTCCEEEEEEEEESSCC
T ss_pred eEEEEEEecCCceEEEECCEEeechhhhhhh-ceeecceEEEEeccCC-------CCCceeeEeeEEEecCcC
Confidence 9999999999999999999776666554322 2222333444422221 146899999999966665
No 39
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=80.83 E-value=29 Score=30.57 Aligned_cols=83 Identities=10% Similarity=0.027 Sum_probs=52.7
Q ss_pred ccEEEEEEEecCCCCCCCe--EEEEEcCC------CCEEEEEE-ECCEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEE
Q psy6627 33 KELMISLLFTSPLTKRSDA--ILFLSAGK------IDYCLLRL-ESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNV 103 (195)
Q Consensus 33 ~~~~l~l~f~~~rT~~~~g--lL~~~~~~------~~~l~l~l-~~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l 103 (195)
....++..++.+.+ ...+ +++-..+. .....+.| .+|++.+.-+.+. ...+.. ....+..++||++.|
T Consensus 529 tdytVs~Dv~~~~~-~~g~a~i~~Rv~~~g~~~~~~~gy~~~i~~~G~~~l~~~~~~-~~vLa~-g~~~~~~~~w~~L~l 605 (656)
T 3zr5_A 529 TNMTVQCDVYIETP-RSGGVFIAGRVNKGGILIRSATGVFFWIFANGSYRVTADLGG-WITYAS-GHADVTAKRWYTLTL 605 (656)
T ss_dssp CEEEEEEEEEECST-TTCEEEEEEEECCCGGGGGGCEEEEEEEETTTEEEEEEETTC-CSEEEE-EECSCCTTCEEEEEE
T ss_pred ccEEEEEEEEeccC-CCCcEEEEEEEcCCCCCccccceEEEEEEcCCEEEEEEecCC-eEEEEE-EEecCCCCceEEEEE
Confidence 44556666633332 2233 44444332 22444554 4999888776654 334433 345789999999999
Q ss_pred EEECCEEEEEECCcc
Q psy6627 104 TRIEANVTLTVDLIH 118 (195)
Q Consensus 104 ~~~~~~~~L~vd~~~ 118 (195)
...+..++..||+..
T Consensus 606 ~~~G~~i~~~ldG~~ 620 (656)
T 3zr5_A 606 GIKGYFAFGMLNGTI 620 (656)
T ss_dssp EEETTEEEEEETTEE
T ss_pred EEECCEEEEEECCEE
Confidence 999999999999943
No 40
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=81.12 E-value=0.35 Score=34.82 Aligned_cols=69 Identities=14% Similarity=0.086 Sum_probs=41.1
Q ss_pred CCCeEEEEEcC-CCCEEEEEEE--CCEEEEE-EEcCCCeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcc
Q psy6627 48 RSDAILFLSAG-KIDYCLLRLE--SGRLKVH-INLGAGDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIH 118 (195)
Q Consensus 48 ~~~glL~~~~~-~~~~l~l~l~--~g~l~~~-~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~ 118 (195)
..-|++|.... ..++-.+.+. .+++.+. +..|. ...+. ....++..|+||++.|...+..+++.||+..
T Consensus 60 ~~~Gi~fR~~~d~~~~Y~~~i~~~~~~~~l~~~~~G~-~~~l~-~~~~~~~~g~w~~l~I~~~G~~i~~~vnG~~ 132 (172)
T 4azz_A 60 GAGALMFRSDKDAKNGYLANVDAKHDLVKFFKFENGA-ASVIA-EYKTPIDVNKKYHLKTEAEGDRFKIYLDDRL 132 (172)
Confidence 35567776632 2345555554 3334331 22222 11222 2245677899999999999999999999943
No 41
>3rsj_A BONT/F; clostridium botulinum type F, ganglioside binding site, GD1A; HET: NGA GAL SIA; 2.00A {Clostridium botulinum} PDB: 3fuq_A
Probab=78.90 E-value=26 Score=28.81 Aligned_cols=129 Identities=7% Similarity=0.024 Sum_probs=72.1
Q ss_pred CccEEEEEEEecCCCCC-----CCeEEEEEcCC-CCEEEEEEECCEEEEEE-EcCCCeeEE--eCCCcc---cCCCCCcE
Q psy6627 32 HKELMISLLFTSPLTKR-----SDAILFLSAGK-IDYCLLRLESGRLKVHI-NLGAGDTEI--STPRGL---RLDDLLWH 99 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~-----~~glL~~~~~~-~~~l~l~l~~g~l~~~~-~~g~~~~~~--~~~~~~---~i~dg~wh 99 (195)
...+.++|+++.++-.. ..-.+.-.-++ .-=..+.|.++.+.+.+ +.......+ +..... .+- |.|+
T Consensus 66 ~~nfSiSFWvRi~k~~~~~nl~n~ytii~~wp~NNwGW~i~~~~n~~iWtliD~ng~~~~i~fry~~~~~~~dyi-n~W~ 144 (413)
T 3rsj_A 66 YQNFSISFWVRIPKYFNKVNLNNEYTIIDCIRNNNSGWKISLNYNKIIWTLQDTAGNNQKLVFNYTQMISISDYI-NKWI 144 (413)
T ss_dssp SCCEEEEEEEECCCCCSGGGTTCCEEEEEEEETTTEEEEEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSST-TSEE
T ss_pred ccceEEEEEEEcCCcccccccccccceecceeccCccceEEecCCceEEEEEcCCCCeeEEEEeecccCCccccc-cceE
Confidence 57889999995444322 11222211112 23357778877766544 443322222 211111 112 7999
Q ss_pred EEEEEEEC-CEEEEEECCcceeeEEcCCceeeeecCCcEEEcccCCCCccccCCCcCceeEeccEEECCcch
Q psy6627 100 SVNVTRIE-ANVTLTVDLIHTTFEKLPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRGCLSDVIYNNIDT 170 (195)
Q Consensus 100 ~V~l~~~~-~~~~L~vd~~~~~~~~~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~GCi~~v~in~~~l 170 (195)
+|++..+. +...|.++|.........+- ........+.+|..... ..+.|||+++++=+++|
T Consensus 145 hVTIT~drlg~~~IYINGklv~~~~i~~L-~~I~~sn~I~fg~~~~~--------~~~n~~Idd~~IfdKeL 207 (413)
T 3rsj_A 145 FVTITNNRLGNSRIYINGNLIDEKSISNL-GDIHVSDNILFKIVGCN--------DTRYVGIRYFKVFDTEL 207 (413)
T ss_dssp EEEEEECTTSEEEEEETTEEEEEEECTTC-CCCCCCSEEEEEEESCC--------SSCEEEEEEEEEESSCC
T ss_pred EEEEEecCCCCeeEEECCEEecceehhhc-cccccccceEEeeeccc--------CcceEEEEEEEEEcccC
Confidence 99999973 44699999966655554422 22233345665544332 35889999999966665
No 42
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=75.31 E-value=10 Score=28.77 Aligned_cols=32 Identities=13% Similarity=-0.127 Sum_probs=26.0
Q ss_pred cCCCCCcEEEEEEEECCEEEEEECCcceeeEE
Q psy6627 92 RLDDLLWHSVNVTRIEANVTLTVDLIHTTFEK 123 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~ 123 (195)
..-.|+|.+..|...+..+++.+++.......
T Consensus 156 ~~p~geWN~~~I~~~g~~i~v~lNG~~V~~~~ 187 (236)
T 3u1x_A 156 VNPPGEWNSSMVLYKDGYVEHWLNGEKLFSFQ 187 (236)
T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCCCceEEEEEEEECCEEEEEECCEEEEEEe
Confidence 45579999999999999999999995544433
No 43
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=72.99 E-value=0.2 Score=41.91 Aligned_cols=40 Identities=8% Similarity=0.025 Sum_probs=32.5
Q ss_pred CCCCeEEEEEcC--CCCEEEEEEECCEEEEEEEcCCCeeEEe
Q psy6627 47 KRSDAILFLSAG--KIDYCLLRLESGRLKVHINLGAGDTEIS 86 (195)
Q Consensus 47 ~~~~glL~~~~~--~~~~l~l~l~~g~l~~~~~~g~~~~~~~ 86 (195)
..++|+++|.++ ..||++++|.+|++.+.++.|+....+.
T Consensus 364 ~~~~G~cl~~~~~~~~d~ial~l~~G~v~~syd~G~~~~~v~ 405 (423)
T 2gy5_A 364 VKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVN 405 (423)
T ss_dssp ECTTSCEECCSEEEECSSCEEEECCEEEECGGGCEEEEEEEE
T ss_pred ECCCeEEEeCCCcCcccceeeeEEeeeEEEeecCCCcceEEE
Confidence 478999999874 3799999999999999999887654443
No 44
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=59.08 E-value=35 Score=25.03 Aligned_cols=27 Identities=7% Similarity=0.126 Sum_probs=23.6
Q ss_pred CCCcEEEEEEEECCEEEEEECCcceee
Q psy6627 95 DLLWHSVNVTRIEANVTLTVDLIHTTF 121 (195)
Q Consensus 95 dg~wh~V~l~~~~~~~~L~vd~~~~~~ 121 (195)
.|+|.+..|...+..+++.+++.....
T Consensus 119 ~GeWN~~~I~~~g~~i~v~lNG~~V~~ 145 (201)
T 3imm_A 119 PGEWNHMRIKCAGQHIMVILNGKKVTE 145 (201)
T ss_dssp TTSEEEEEEEEETTEEEEEETTEEEEE
T ss_pred CCeeEEEEEEEECCEEEEEECCEEEEE
Confidence 789999999999999999999955443
No 45
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=49.04 E-value=58 Score=21.93 Aligned_cols=44 Identities=9% Similarity=0.036 Sum_probs=29.7
Q ss_pred CCCEEEEEEECCEEEEEEEcCCCe-----e-EEeCCCcccCCCCCcEEEE
Q psy6627 59 KIDYCLLRLESGRLKVHINLGAGD-----T-EISTPRGLRLDDLLWHSVN 102 (195)
Q Consensus 59 ~~~~l~l~l~~g~l~~~~~~g~~~-----~-~~~~~~~~~i~dg~wh~V~ 102 (195)
.+-|-.|.+-.|.|.+..-..++. . .+.......+....||+|+
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~~~~~~~~~~~~~~~~i~Pq~wHrVe 85 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEATEPEIKVVINAGQFATSPPQYWHRIE 85 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCCSCSEEEEEETTEEEEECTTCEEEEE
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCCcccEEEEeCCCCCceeCCCceEEEE
Confidence 367889999999999886432221 1 1222234477888999999
No 46
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=45.65 E-value=1.6e+02 Score=25.92 Aligned_cols=140 Identities=9% Similarity=-0.064 Sum_probs=73.5
Q ss_pred cccc--cchhhhccc-----------CccEEEEEEEecCCCCCCCeEEEEE--cCCCC--EEEEEEECC-EEEEEEEcCC
Q psy6627 19 PTFH--KSCEKALLY-----------HKELMISLLFTSPLTKRSDAILFLS--AGKID--YCLLRLESG-RLKVHINLGA 80 (195)
Q Consensus 19 ~~F~--~sy~~~~~~-----------~~~~~l~l~f~~~rT~~~~glL~~~--~~~~~--~l~l~l~~g-~l~~~~~~g~ 80 (195)
.+|. ++.+.+|.. ++.+.|-....+|..-+.+.-|+=+ ++... ++-|....+ +=.+.+ +.
T Consensus 467 ~~f~g~~~~a~wpv~~~~~n~~y~f~n~~ftlvatv~i~~~p~~~~pl~g~~~~~~~~~~~~glsy~~~~kw~~~~--~~ 544 (648)
T 1ms9_A 467 LKFAGVGGGALWPVSQQGQNQRYHFANHAFTLVASVTIHEVPKGASPLLGASLDSSGGKKLLGLSYDKRHQWQPIY--GS 544 (648)
T ss_dssp EEECSTTCEEEEESGGGTTBCTTGGGGTEEEEEEEEEECSCCSSCEEEEEEESSSSSSSEEEEEEECTTSCEEEEE--TT
T ss_pred eEEecCCCcEEeecCccCCceEEEEECceEEEEEEEEeccccCCCCceEEEEecCCCCcEEEEEEEeCCccEEEEe--CC
Confidence 4665 677888754 4566666555444444444445533 22222 444444433 322222 32
Q ss_pred CeeEEeCCCcccCCCCCcEEEEEEEECCEEEEEECCcce-eeEE-cCCceeeeecCCcEEEcccCCCCccccCCCcCcee
Q psy6627 81 GDTEISTPRGLRLDDLLWHSVNVTRIEANVTLTVDLIHT-TFEK-LPGKFFELNIHYGLFIGGQGDFTELFLGHIEWLRG 158 (195)
Q Consensus 81 ~~~~~~~~~~~~i~dg~wh~V~l~~~~~~~~L~vd~~~~-~~~~-~~~~~~~l~~~~~i~iGg~~~~~~~~~~~~~~F~G 158 (195)
.... ....-..++-|+|.|....+...++||+... .... ......... -..+||||-..... ..+-.=
T Consensus 545 ~~~~----~~~~we~~~~~qv~l~l~~~~~s~yvdg~~~~~~~~~~~~~~~~~~-ishfy~g~~~~~~~-----~~~~~v 614 (648)
T 1ms9_A 545 TPVT----PTGSWEMGKRYHVVLTMANKIGSVYIDGEPLEGSGQTVVPDERTPD-ISHFYVGGYKRSGM-----PTDSRV 614 (648)
T ss_dssp SCCC----CBSCCCTTCEEEEEEEEETTEEEEEETTEECTTCCEECSCSSCCCC-CCEEEESSCSCTTS-----CCCCCE
T ss_pred Cccc----ccccccCCcceEEEEEEeCCcEEEEECCEEecCCcccccccCCCcc-cceEEEcCCCCCCc-----ccCCCE
Confidence 2111 1234566789999999988899999999543 1222 111111111 24699999655421 122222
Q ss_pred EeccEEECCcch
Q psy6627 159 CLSDVIYNNIDT 170 (195)
Q Consensus 159 Ci~~v~in~~~l 170 (195)
=.++|.+-+++|
T Consensus 615 tv~nv~lynr~l 626 (648)
T 1ms9_A 615 TVNNVLLYNRQL 626 (648)
T ss_dssp EEEEEEEESSCC
T ss_pred EEEEeeEecCCC
Confidence 456666766665
No 47
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=44.48 E-value=62 Score=24.00 Aligned_cols=26 Identities=12% Similarity=0.225 Sum_probs=23.2
Q ss_pred CCCcEEEEEEEECCEEEEEECCccee
Q psy6627 95 DLLWHSVNVTRIEANVTLTVDLIHTT 120 (195)
Q Consensus 95 dg~wh~V~l~~~~~~~~L~vd~~~~~ 120 (195)
.|+|.+.+|...+..+++.+++....
T Consensus 132 ~GeWN~~~I~~~g~~i~v~lNG~~V~ 157 (214)
T 3s5q_A 132 PGEWNRMIITAKGQQIDIELNGKHIV 157 (214)
T ss_dssp TTSEEEEEEEEETTEEEEEETTEEEE
T ss_pred CCccEEEEEEEECCEEEEEECCEEEE
Confidence 78999999999999999999995544
No 48
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=41.33 E-value=68 Score=21.88 Aligned_cols=48 Identities=13% Similarity=0.072 Sum_probs=30.5
Q ss_pred CCEEEEEEECCEEEEEEEcCCCe-----eEE-eCCCcccCCCCCcEEEEEEEEC
Q psy6627 60 IDYCLLRLESGRLKVHINLGAGD-----TEI-STPRGLRLDDLLWHSVNVTRIE 107 (195)
Q Consensus 60 ~~~l~l~l~~g~l~~~~~~g~~~-----~~~-~~~~~~~i~dg~wh~V~l~~~~ 107 (195)
+-|=.|.+-.|.|.+..-..++. ..+ .......+..++||+|+.....
T Consensus 38 Gtwg~l~VL~G~L~f~~~~e~g~~~~~~~~l~~~~~~~~i~Pq~wH~Ve~lsdd 91 (127)
T 3bb6_A 38 GVYPRLSVMHGAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDD 91 (127)
T ss_dssp TEEEEEEEEESEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTT
T ss_pred CEEEEEEEEEeEEEEEEECCCCCcceeEEEEeCCCCceEECCCCcEEEEEcCCC
Confidence 56778888899998875333222 111 2223357888999999974444
No 49
>1dyp_A Kappa-carrageenase; hydrolase, kappa-carrageenan double helix degradation; HET: MSE; 1.54A {Pseudoalteromonas carrageenovora} SCOP: b.29.1.2
Probab=38.44 E-value=76 Score=24.15 Aligned_cols=29 Identities=17% Similarity=0.055 Sum_probs=24.0
Q ss_pred CCCcEEEEEEEECCEEEEEECCcceeeEE
Q psy6627 95 DLLWHSVNVTRIEANVTLTVDLIHTTFEK 123 (195)
Q Consensus 95 dg~wh~V~l~~~~~~~~L~vd~~~~~~~~ 123 (195)
...||.-.+......++..||+....+..
T Consensus 189 ~~~fHtY~veW~~~~I~~yvDg~~~~~~~ 217 (271)
T 1dyp_A 189 RNDFHTYGVNVTKDKITWYVDGEIVGEKD 217 (271)
T ss_dssp TSSCEEEEEEECSSEEEEEETTEEEEEEE
T ss_pred CCCcEEEEEEEECCEEEEEECCEEEEeec
Confidence 35799999999999999999996554443
No 50
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=38.37 E-value=86 Score=28.21 Aligned_cols=81 Identities=15% Similarity=0.157 Sum_probs=48.0
Q ss_pred ccEEEEEEEecCCCCCCCeE-EEEEcCCCCEEEEE-EE-CCEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEEEEEC--
Q psy6627 33 KELMISLLFTSPLTKRSDAI-LFLSAGKIDYCLLR-LE-SGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRIE-- 107 (195)
Q Consensus 33 ~~~~l~l~f~~~rT~~~~gl-L~~~~~~~~~l~l~-l~-~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~~-- 107 (195)
.-+.++-.. |-.....+ =+|..+...|+.+. +. +|.+.+.+.-+++...+ . .+ .+|+.||.+.+....
T Consensus 92 ~~~~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~~~~~~~g~~~~-~-~g--~~~~~~h~~~~~~~~~~ 164 (781)
T 1w0p_A 92 FGWRMTTEM---KVLSGGMITNYYANGTQRVLPIISLDSSGNLVVEFEGQTGRTVL-A-TG--TAATEYHKFELVFLPGS 164 (781)
T ss_dssp HCEEEEEEE---EEEEESCBCCEEECSSEEECEEEEECTTSCEEEEETTCCSCEEE-E-CG--GGGGSCEEEEEEEECSS
T ss_pred cCceEEEEE---EEecCCceeeeecCCCceEEEEEEEcCCCcEEEEEEccCCCeee-c-cC--CCCCceeEEEEEeecCC
Confidence 445555555 43333332 24555655676665 44 37777777544454432 1 22 288999999988554
Q ss_pred -CEEEEEECCccee
Q psy6627 108 -ANVTLTVDLIHTT 120 (195)
Q Consensus 108 -~~~~L~vd~~~~~ 120 (195)
..+.+.+|+....
T Consensus 165 ~~~~~f~~dG~l~~ 178 (781)
T 1w0p_A 165 NPSASFYFDGKLIR 178 (781)
T ss_dssp SCEEEEEETTEEEE
T ss_pred CceeEEecCCcEEE
Confidence 4788899985443
No 51
>3d7q_A XISI protein-like; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.30A {Nostoc punctiforme pcc 73102}
Probab=37.78 E-value=89 Score=20.80 Aligned_cols=54 Identities=6% Similarity=0.023 Sum_probs=36.7
Q ss_pred chhhhcccCccEEEEEEEecCCCCCCCeEEEEEc--CC----CCEEEEEEECCEEEEEEEcCC
Q psy6627 24 SCEKALLYHKELMISLLFTSPLTKRSDAILFLSA--GK----IDYCLLRLESGRLKVHINLGA 80 (195)
Q Consensus 24 sy~~~~~~~~~~~l~l~f~~~rT~~~~glL~~~~--~~----~~~l~l~l~~g~l~~~~~~g~ 80 (195)
.|+.++.+.......+-| -+...+=+|++.+ +. +-.+-+.|.+|++.++.+...
T Consensus 18 ~ya~~~~~~~~ie~~lif---D~e~dhYll~~~GW~~~~ri~g~~iHidIkd~KIWIq~d~TE 77 (112)
T 3d7q_A 18 KHLQYKPSYGDVEVEQIF---DEEHDHYQIISVGWNNQHRIYGPIMHLDIKNNKIWIQQNTTE 77 (112)
T ss_dssp HHHHHC---CEEEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEECSS
T ss_pred HHhcCCCCCCCeEEEEEE---ecCCCEEEEEEccEECCEEEEEEEEEEEEECCeEEEEeCCcc
Confidence 455555544556788888 8777777888775 32 566777888999998888543
No 52
>2nlv_A XISI protein-like; XISI-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.30A {Anabaena variabilis} SCOP: d.326.1.1
Probab=37.66 E-value=89 Score=20.78 Aligned_cols=53 Identities=13% Similarity=0.184 Sum_probs=37.6
Q ss_pred chhhhcccCccEEEEEEEecCCCCCCCeEEEEEc--CC----CCEEEEEEECCEEEEEEEcC
Q psy6627 24 SCEKALLYHKELMISLLFTSPLTKRSDAILFLSA--GK----IDYCLLRLESGRLKVHINLG 79 (195)
Q Consensus 24 sy~~~~~~~~~~~l~l~f~~~rT~~~~glL~~~~--~~----~~~l~l~l~~g~l~~~~~~g 79 (195)
.|+.++.+.......+-| -+...+=+|++.+ +. +-.+-+.|.+|++.++.+..
T Consensus 18 ~ya~~~~~~~~ie~~lif---D~e~dhYll~~~GW~~~~ri~g~~iHidIkd~KIWIq~d~T 76 (112)
T 2nlv_A 18 NYASDDVSDQDVEVQLIL---DTERNHYQWMNVGWQGLNRIYRCVIHFDIKDGKIWLQQNLT 76 (112)
T ss_dssp HHHHTCCCCTTEEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEECS
T ss_pred HHhcCCCCCCCeEEEEEE---ecCCCEEEEEEccEECCEEEEEEEEEEEEECCeEEEEeCCc
Confidence 455555555567888888 7777777888775 32 56667778888888888754
No 53
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=33.98 E-value=64 Score=23.57 Aligned_cols=26 Identities=12% Similarity=0.022 Sum_probs=22.4
Q ss_pred CCcEEEEEEEECCEEEEEECCcceee
Q psy6627 96 LLWHSVNVTRIEANVTLTVDLIHTTF 121 (195)
Q Consensus 96 g~wh~V~l~~~~~~~~L~vd~~~~~~ 121 (195)
..||.-.+......+...||+....+
T Consensus 142 ~~fH~Y~~~W~~~~I~~yvDg~~~~~ 167 (214)
T 2ayh_A 142 KGFHTYAFDWQPGYIKWYVDGVLKHT 167 (214)
T ss_dssp GSCEEEEEEEETTEEEEEETTEEEEE
T ss_pred CCeEEEEEEEeCCEEEEEECCEEEEE
Confidence 47999999999999999999965443
No 54
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=31.64 E-value=94 Score=23.32 Aligned_cols=28 Identities=11% Similarity=-0.080 Sum_probs=23.3
Q ss_pred CCCcEEEEEEEECCEEEEEECCcceeeE
Q psy6627 95 DLLWHSVNVTRIEANVTLTVDLIHTTFE 122 (195)
Q Consensus 95 dg~wh~V~l~~~~~~~~L~vd~~~~~~~ 122 (195)
...||.-.+......+...||+....+.
T Consensus 161 ~~~fHtY~ieW~p~~I~~yVDG~~~~t~ 188 (234)
T 3i4i_A 161 SEDFHIYAFNWQPNYIAWLVDGEEVYRA 188 (234)
T ss_dssp TTSCEEEEEEEETTEEEEEETTEEEEEE
T ss_pred cCCeEEEEEEEECCEEEEEECCEEEEEE
Confidence 4589999999999999999999544333
No 55
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Probab=30.96 E-value=1.2e+02 Score=20.23 Aligned_cols=53 Identities=9% Similarity=0.219 Sum_probs=35.1
Q ss_pred chhhhcccCc--cEEEEEEEecCCCCCCCeEEEEEc--CC----CCEEEEEEECCEEEEEEEcC
Q psy6627 24 SCEKALLYHK--ELMISLLFTSPLTKRSDAILFLSA--GK----IDYCLLRLESGRLKVHINLG 79 (195)
Q Consensus 24 sy~~~~~~~~--~~~l~l~f~~~rT~~~~glL~~~~--~~----~~~l~l~l~~g~l~~~~~~g 79 (195)
.|+.++.+.. .....+-| -+...+=+|++.+ +. +-.+-+.|.+|++.++.+..
T Consensus 18 ~ya~~~~~~~~~~ie~~lif---D~e~dhYll~~~GW~~~~ri~g~~iHidIkd~KIWIq~d~T 78 (114)
T 2nwv_A 18 EYDNLSRQSPETNYETCLVF---DENHDNYLWLAVDWQGSKRIKYTYVHIRIKNEKIYIEEDYT 78 (114)
T ss_dssp HHHHHHTTCSSCCCCEEEEE---ETTTTEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEEECC
T ss_pred HHhcCCccCCCCCeeEEEEE---ecCCCEEEEEEccEECCEEEEEEEEEEEEECCeEEEEeCCc
Confidence 3455544433 46777888 7777777777775 32 55667777888888888754
No 56
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A
Probab=30.19 E-value=96 Score=22.71 Aligned_cols=27 Identities=11% Similarity=0.021 Sum_probs=22.8
Q ss_pred CCcEEEEEEEECCEEEEEECCcceeeE
Q psy6627 96 LLWHSVNVTRIEANVTLTVDLIHTTFE 122 (195)
Q Consensus 96 g~wh~V~l~~~~~~~~L~vd~~~~~~~ 122 (195)
..||.-.+......+...||+....+.
T Consensus 84 ~~fHtY~veW~p~~I~~yVDG~~~~t~ 110 (208)
T 1cpn_A 84 KGFHTYAFDWQPGYIKWYVDGVLKHTA 110 (208)
T ss_dssp GSCEEEEEEEETTEEEEEETTEEEEEE
T ss_pred cCcEEEEEEECCCeEEEEECCEEEEEe
Confidence 479999999999999999999654443
No 57
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=29.67 E-value=57 Score=24.61 Aligned_cols=28 Identities=11% Similarity=0.009 Sum_probs=23.1
Q ss_pred CCCcEEEEEEEECCEEEEEECCcceeeE
Q psy6627 95 DLLWHSVNVTRIEANVTLTVDLIHTTFE 122 (195)
Q Consensus 95 dg~wh~V~l~~~~~~~~L~vd~~~~~~~ 122 (195)
...||.-.+......+...||+....+.
T Consensus 165 ~~~fHtY~ieW~p~~I~~yVDG~~~~~~ 192 (238)
T 3o5s_A 165 ANAYHTYAFDWQPNSIKWYVDGQLKHTA 192 (238)
T ss_dssp GGSCEEEEEEECSSCEEEEETTEEEEEE
T ss_pred ccCeEEEEEEEECCEEEEEECCEEEEEE
Confidence 3579999999999999999999544433
No 58
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2
Probab=25.47 E-value=1.3e+02 Score=22.13 Aligned_cols=26 Identities=12% Similarity=0.049 Sum_probs=22.1
Q ss_pred CcEEEEEEEECCEEEEEECCcceeeE
Q psy6627 97 LWHSVNVTRIEANVTLTVDLIHTTFE 122 (195)
Q Consensus 97 ~wh~V~l~~~~~~~~L~vd~~~~~~~ 122 (195)
.||.-.+.+....+...||+....+.
T Consensus 17 ~fH~Y~i~W~~~~I~~~VDg~~~~~~ 42 (214)
T 1ajo_A 17 GFHTYAFDWQPGYIKWYVDGVLKHTA 42 (214)
T ss_dssp SCEEEEEEEETTEEEEEETTEEEEEE
T ss_pred CcEEEEEEEeCCeEEEEECCEEEEEE
Confidence 69999999999999999999654433
No 59
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=25.05 E-value=1.2e+02 Score=22.73 Aligned_cols=30 Identities=10% Similarity=-0.093 Sum_probs=24.4
Q ss_pred CCCCcEEEEEEEECCEEEEEECCcceeeEE
Q psy6627 94 DDLLWHSVNVTRIEANVTLTVDLIHTTFEK 123 (195)
Q Consensus 94 ~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~ 123 (195)
....||.-.+......+...||+....+..
T Consensus 163 ~~~~fH~Y~veWt~~~I~~yVDg~~~~~~~ 192 (251)
T 3iln_A 163 ARTDFHVYAIEWTPEEIRWFVDDSLYYRFP 192 (251)
T ss_dssp TTTSCEEEEEEECSSEEEEEETTEEEEEEE
T ss_pred cccCcEEEEEEEECCEEEEEECCEEEEEEe
Confidence 345899999999999999999996554443
No 60
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=24.46 E-value=1.3e+02 Score=22.62 Aligned_cols=31 Identities=6% Similarity=-0.014 Sum_probs=25.4
Q ss_pred CCCCCcEEEEEEEECCEEEEEECCcceeeEE
Q psy6627 93 LDDLLWHSVNVTRIEANVTLTVDLIHTTFEK 123 (195)
Q Consensus 93 i~dg~wh~V~l~~~~~~~~L~vd~~~~~~~~ 123 (195)
.-.|+|.+.+|...+..+++.|++.......
T Consensus 150 kp~GeWNt~~I~v~g~~v~v~lNG~~V~~~~ 180 (241)
T 3h3l_A 150 KPYGNWNKTRIVVYNQRVIHYMNDVKILEFQ 180 (241)
T ss_dssp CCTTSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCCcceEEEEEEECCEEEEEECCEEEEEEE
Confidence 3468999999999999999999996554443
No 61
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=23.48 E-value=2e+02 Score=22.05 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=21.2
Q ss_pred cCCCCCcEEEEEEEECC-----------EEEEEECCcce
Q psy6627 92 RLDDLLWHSVNVTRIEA-----------NVTLTVDLIHT 119 (195)
Q Consensus 92 ~i~dg~wh~V~l~~~~~-----------~~~L~vd~~~~ 119 (195)
.+..|+|++|+....-+ .+.+.||+...
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~v 197 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKKE 197 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEEE
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEEE
Confidence 58889999999766533 45889999544
No 62
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=22.87 E-value=4.9e+02 Score=24.62 Aligned_cols=92 Identities=9% Similarity=0.030 Sum_probs=59.8
Q ss_pred CccEEEEEEEecCCCCCCCeEEEEEcCCCCEEEEEEECCEEEEEEEcCCCeeEEeCCCcccCCCCCcEEEEEEEE--CCE
Q psy6627 32 HKELMISLLFTSPLTKRSDAILFLSAGKIDYCLLRLESGRLKVHINLGAGDTEISTPRGLRLDDLLWHSVNVTRI--EAN 109 (195)
Q Consensus 32 ~~~~~l~l~f~~~rT~~~~glL~~~~~~~~~l~l~l~~g~l~~~~~~g~~~~~~~~~~~~~i~dg~wh~V~l~~~--~~~ 109 (195)
...+.++|+..+|+-....-.+.-.-....=..+.|+++.+.+.+.-.+|...-..- ...++ ++||-|+++-. ++.
T Consensus 898 y~nFSISFWiRi~k~~~~~~~iI~~~~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~f-s~~i~-NkW~FVTITnnRL~~s 975 (1196)
T 3vuo_A 898 TNNFTICFWLRFTGKDDDKTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYL-SNVIN-NNWYYISISVDRLKDQ 975 (1196)
T ss_dssp SCCEEEEEEEEECCCCSSCEEEEEEECSSCEEEEEEETTEEEEEEECTTCCEEEEEE-CSCTT-SCCEEEEEEEETTTTE
T ss_pred ccceeEEEEEEccCCCCCceeEeeecccCCCcEEEEeCCcEEEEEEecCCceeeEEE-eEeec-ceEEEEEEEecccCce
Confidence 567889999955543333333333323356788999999999988644443332221 22343 68999999877 477
Q ss_pred EEEEECCcceeeEEcC
Q psy6627 110 VTLTVDLIHTTFEKLP 125 (195)
Q Consensus 110 ~~L~vd~~~~~~~~~~ 125 (195)
+.+.++|.........
T Consensus 976 ~~IYING~Li~~~~I~ 991 (1196)
T 3vuo_A 976 LLIFINDKNVANVSIE 991 (1196)
T ss_dssp EEEEETTEEEEEEECT
T ss_pred eEEEECCEEecchhhh
Confidence 8999999766666543
No 63
>3juu_A Porphyranase B; glycoside hydrolase family GH16, beta-sandwich fold, jelly roll, sugar binding protein, hydrolase-carbohydrate complex; HET: MES GOL; 1.80A {Zobellia galactanivorans}
Probab=20.14 E-value=2.3e+02 Score=21.77 Aligned_cols=30 Identities=10% Similarity=-0.071 Sum_probs=24.1
Q ss_pred CCCCcEEEEEEEE-CCEEEEEECCcceeeEE
Q psy6627 94 DDLLWHSVNVTRI-EANVTLTVDLIHTTFEK 123 (195)
Q Consensus 94 ~dg~wh~V~l~~~-~~~~~L~vd~~~~~~~~ 123 (195)
....||.-.+... ...++..||+....+..
T Consensus 197 ~~~~fHtY~veW~s~~~I~~yVDG~~~~t~~ 227 (280)
T 3juu_A 197 AYEDFHVYGVWWKSKDEIIFFLDGKMQSKVT 227 (280)
T ss_dssp TTTSCEEEEEEEEETTEEEEEETTEEEEEEC
T ss_pred CCCCcEEEEEEEcCCCeEEEEECCEEEEEEc
Confidence 3458999999998 99999999996554443
Done!