RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6628
(132 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 46.5 bits (111), Expect = 5e-09
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSR-VHTGEKPYACE 107
KPY C C K F H + VHT E+P+ C+
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 35.4 bits (82), Expect = 1e-04
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 99 TGEKPYACEFCPLTFRHSSHLFRHRRSLH 127
+ KPY C+ C F HL H + +H
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 34.6 bits (80), Expect = 2e-04
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 38 SEERPRFKCEGRGECDRVFTTRNMLNIHIKRDHQKEKPYQC 78
S +P + C+ C + F+ + LN HIK+ H E+P++C
Sbjct: 1 SVGKP-YICQ---SCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 27.3 bits (61), Expect = 0.086
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 12 FTCQVCSKIFSYENGLKAHVRNKHGSSEERPRFKCE 47
+ CQ C K FS + L H++ H + ERP KC+
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVH--TSERP-HKCQ 38
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 42.3 bits (100), Expect = 2e-07
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 96 RVHTGEKPYACEFCPLTFRHSSHLFRHRRSLH 127
R H+GEKPY C C F S + H H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32
Score = 35.0 bits (81), Expect = 1e-04
Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 68 RDHQKEKPYQCSQCSKSFFSKYDHKIHS-RVHTGE 101
R H EKPY+C C F K+H + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 23.8 bits (52), Expect = 1.8
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Query: 40 ERPRFKCEGRGECDRVFTTRNMLNIHIKRDHQKE 73
E+P ++C C FT + +HI + H +
Sbjct: 6 EKP-YECY---ICHARFTQSGTMKMHILQKHTEN 35
Score = 23.8 bits (52), Expect = 2.1
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 12 FTCQVCSKIFSYENGLKAHVRNKHG 36
+ C +C F+ +K H+ KH
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHT 33
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 41.6 bits (98), Expect = 3e-07
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 94 HSRVHTGEKPYACEFCPLTFRHSSHLFRHRR 124
+R TG KP+ C C +F S HL HR+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 31.6 bits (72), Expect = 0.003
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 68 RDHQKEKPYQCSQCSKSFFSKYDHKIHSRVHTG 100
R KP+QC C +SF +H + H
Sbjct: 4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 41.5 bits (98), Expect = 4e-07
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 70 HQKEKPYQCSQCSKSFFSKYDHKIHSRVHTGE 101
H EKPY C +C K+F H RVHTGE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 40.7 bits (96), Expect = 7e-07
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 97 VHTGEKPYACEFCPLTFRHSSHLFRHRR 124
+H+GEKPY C C F SS L +H+R
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQR 28
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.9 bits (96), Expect = 9e-07
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 76 YQCSQ--CSKSFFSKYDHKIHSRVHTGEKPYACEF 108
+ C + C KSF K K H ++H+ + Y CEF
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 26.2 bits (58), Expect = 0.23
Identities = 9/35 (25%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 44 FKCEGRGECDRVFTTRNMLNIHIKRDHQKEKPYQC 78
F C C + F + L H + H + Y C
Sbjct: 2 FSCPEPA-CGKSFNFKKHLKEH-MKLHSDTRDYIC 34
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 40.4 bits (95), Expect = 1e-06
Identities = 17/32 (53%), Positives = 18/32 (56%)
Query: 96 RVHTGEKPYACEFCPLTFRHSSHLFRHRRSLH 127
R HTGEKPYAC C TFR L H + H
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32
Score = 37.0 bits (86), Expect = 2e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 68 RDHQKEKPYQCSQCSKSFFSKYDHKIHSRVHTGEK 102
R H EKPY CS C K+F K +H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 39.5 bits (93), Expect = 2e-06
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 74 KPYQCSQCSKSFFSKYDHKIHSRVHTGEK 102
+ + C C+++F + K H R HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.3 bits (69), Expect = 0.006
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 102 KPYACEFCPLTFRHSSHLFRHRR 124
+ + CE C F HL RH R
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 21.8 bits (47), Expect = 9.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 12 FTCQVCSKIFSYENGLKAHVR 32
F C+VC++ F+ + LK H R
Sbjct: 3 FVCEVCTRAFARQEHLKRHYR 23
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 39.0 bits (91), Expect = 4e-06
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 94 HSRVHTGEKPYACEFCPLTFRHSSHLFRHRR 124
+ Y C+ C +F HSS L +HRR
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33
Score = 34.8 bits (80), Expect = 1e-04
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 67 KRDHQKEKPYQCSQCSKSFFSKYDHKIHSRVHTGE 101
+ ++ + Y+C +C KSF D H R HTGE
Sbjct: 4 EWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 38.9 bits (90), Expect = 6e-06
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVHTGEKPYACEFCPLTFRHSSHLFRHRR 124
+K Y C QC KSF K H +H G +PY C C F+ HL H +
Sbjct: 1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51
Score = 30.4 bits (68), Expect = 0.008
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 51 ECDRVFTTRNMLNIHIKRDHQKEKPYQCSQCSKSFFSKYDHKIHSRVH 98
+C + FT ++ + H H +PY C C K F K+ H ++H
Sbjct: 7 QCGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 25.0 bits (54), Expect = 0.92
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 101 EKPYACEFCPLTFRHSSHLFRHRRSLHQMY 130
+K Y C+ C +F H S RH +
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLR 29
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 38.0 bits (89), Expect = 9e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVHTG 100
+KP+QC C ++F H R HTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 32.6 bits (75), Expect = 9e-04
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 101 EKPYACEFCPLTFRHSSHLFRHRR 124
+KP+ C C F S HL H R
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIR 24
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 37.3 bits (87), Expect = 1e-05
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 74 KPYQCSQCSKSFFSKYDHKIHSRVHTGEK 102
K + C +C K F H + H +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 29.2 bits (66), Expect = 0.014
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 102 KPYACEFCPLTFRHSSHLFRHRR 124
K +AC CP F S HL +H +
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIK 23
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 35.4 bits (82), Expect = 9e-05
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 74 KPYQCS--QCSKSFFSKYDHKIHSRVHTGEK 102
+P+ C+ C K F + + H R HTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.1 bits (58), Expect = 0.26
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 102 KPYAC--EFCPLTFRHSSHLFRHRR 124
+P+ C +C F S L RH+R
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKR 25
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 34.7 bits (80), Expect = 2e-04
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 70 HQKEKPYQCSQCSKSFFSKYDHKIHSRVHTGE 101
++P+ C C +F +K + H +VHT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 34.0 bits (78), Expect = 3e-04
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 98 HTGEKPYACEFCPLTFRHSSHLFRHRR 124
+G++P+ C C F ++ RH +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 33.8 bits (78), Expect = 3e-04
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 74 KPYQCSQ--CSKSFFSKYDHKIHSRVHTGE 101
KP++C+ C KS+ + K H R HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 26.5 bits (59), Expect = 0.18
Identities = 8/25 (32%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 102 KPYAC--EFCPLTFRHSSHLFRHRR 124
KP+ C E C ++ +L H R
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLR 25
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 32.0 bits (73), Expect = 0.001
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 74 KPYQCSQ--CSKSFFSKYDHKIHSRVHTGE 101
KP+QC+ C K F ++ + H R+HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 24.6 bits (54), Expect = 0.69
Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 102 KPYACEF--CPLTFRHSSHLFRHRR 124
KP+ C F C F +L H R
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVR 25
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.8 bits (73), Expect = 0.002
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 74 KPYQCSQCSKSFFSKYDHKIHSRVHT 99
KPY+C +C K+F H R+HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 29.9 bits (68), Expect = 0.010
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 102 KPYACEFCPLTFRHSSHLFRHRR 124
KPY C C F +S L H+R
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQR 23
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 31.8 bits (72), Expect = 0.002
Identities = 9/46 (19%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 59 RNMLNIHIKRDHQKEKPYQCSQC--SKSFFSKYDHKIHSRVHTGEK 102
R ++ ++K +K ++C +K+F +Y+ + H + H ++
Sbjct: 4 RGSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 25.7 bits (56), Expect = 0.44
Identities = 6/33 (18%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 94 HSRVHTGEKPYACEFCPL--TFRHSSHLFRHRR 124
+K + C F TF+ ++ H +
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQ 41
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 30.8 bits (69), Expect = 0.005
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 77 QCSQCSKSFFSKYDHKIHSRVHTGEK 102
+C C K F SKY K+H+R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 30.0 bits (68), Expect = 0.007
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 74 KPYQCSQ--CSKSFFSKYDHKIHSRVHTG 100
+PY C C + F D H R+HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 26.5 bits (59), Expect = 0.19
Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Query: 102 KPYACEF--CPLTFRHSSHLFRHRR 124
+PYAC C F S+ L RH R
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIR 25
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 29.6 bits (67), Expect = 0.011
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 73 EKPYQCSQ--CSKSFFSKYDHKIHSRVHTGE 101
++PY C C K+F +D H + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 28.1 bits (63), Expect = 0.044
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 101 EKPYACEF--CPLTFRHSSHLFRHRR 124
++PY+C+ C F + L RH++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKK 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 26.5 bits (58), Expect = 0.19
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 101 EKPYACEFCPLTFRHSSHLFRHRRS 125
E+P+ C+ CP R+SS L H RS
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRS 25
Score = 23.1 bits (49), Expect = 3.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVHTGE 101
E+P++C C + + +H R HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.2 bits (58), Expect = 0.22
Identities = 9/28 (32%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 74 KPYQCSQ--CSKSFFSKYDHKIHSRVHT 99
+PY C C+K F + K H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 24.2 bits (53), Expect = 0.98
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 102 KPYACEF--CPLTFRHSSHLFRHRRS 125
+PY C F C F S++L H +
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILT 26
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 26.5 bits (58), Expect = 0.30
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 10 VVFTCQVCSKIFSYENGLKAHVRNKHGSS 38
+ C +C K+F+ N L+ H +HG +
Sbjct: 5 GILPCGLCGKVFTDANRLRQH-EAQHGVT 32
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 25.6 bits (56), Expect = 0.33
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVH 98
EKP+ C C + F + K H+++H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 22.5 bits (48), Expect = 4.1
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 101 EKPYACEFCPLTFRHSSHLFRHRR 124
EKP+AC+ C F S RH +
Sbjct: 1 EKPFACDICGRKFARSDERKRHTK 24
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 25.5 bits (56), Expect = 0.38
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 78 CSQCSKSFFSKYDHKIHSRVHTGE 101
CS+ + F ++Y +H R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.8 bits (57), Expect = 0.59
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 12 FTCQVCSKIFSYENGLKAHVRNK 34
C C++ F LK H R+K
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSK 38
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 25.0 bits (54), Expect = 0.59
Identities = 13/32 (40%), Positives = 15/32 (46%)
Query: 74 KPYQCSQCSKSFFSKYDHKIHSRVHTGEKPYA 105
K C C K F Y H H+GEKPY+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
Score = 22.3 bits (47), Expect = 6.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 102 KPYACEFCPLTFRHSSHLFRHRRS 125
K ACE C FR HL RH+ S
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLS 27
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.2 bits (52), Expect = 1.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 78 CSQCSKSFFSKYDHKIHSRVHTGE 101
C++C K+F K H VHTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 25.5 bits (56), Expect = 2.1
Identities = 4/21 (19%), Positives = 8/21 (38%)
Query: 104 YACEFCPLTFRHSSHLFRHRR 124
+ CE+C ++ H
Sbjct: 32 WLCEYCLKYMKYEKSYRFHLG 52
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 23.1 bits (49), Expect = 2.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 75 PYQCSQCSKSFFSKYDHKIHSRVHTG 100
P++C C K F K K H R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
>d1mkia_ e.3.1.2 (A:) Probable glutaminase YbgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 328
Score = 25.2 bits (55), Expect = 2.9
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 6/38 (15%)
Query: 12 FTCQVCSKIFSY-----ENGLKAHVRNKHGSSEERPRF 44
FT Q SK+ S+ G+ V ++ F
Sbjct: 71 FTMQSISKVISFIAACMSRGIPY-VLDRVDVEPTGDAF 107
>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.2 bits (49), Expect = 3.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 75 PYQCSQCSKSFFSKYDHKIHSRVH 98
P +CS+CS S SK +IH R+H
Sbjct: 2 PEKCSECSYSCSSKAALRIHERIH 25
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 23.2 bits (49), Expect = 4.2
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 92 KIHSRVHTGEKPYACEFCPLTFRHSSHLFRHRRSLH 127
K SR + E+P C C R S +L RH H
Sbjct: 14 KPRSRSQS-EQPATCPICYAVIRQSRNLRRHLELRH 48
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 23.2 bits (49), Expect = 4.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Query: 99 TGEKPYACEFCPLTFRHSSHLFRHRRSLHQMYE 131
TG KPY C C F RH S + YE
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTSCTKSYE 33
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 26
Score = 22.5 bits (47), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 75 PYQCSQCSKSFFSKYDHKIH 94
PY+CS CS+ F K D + H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSH 21
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 22.8 bits (48), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVHTGE 101
E+ + CS C ++F + + ++H HTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 22.5 bits (48), Expect = 4.4
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 103 PYACEFCPLTFRHSSHLFRHRRSLHQ 128
PY C C F L RH + +H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHS 26
>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 270
Score = 24.4 bits (53), Expect = 5.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 104 YACEFCPLTFRHSSHLFRHRR 124
Y CEFC + + L +H +
Sbjct: 32 YLCEFCLKYMKSRTILQQHMK 52
>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 273
Score = 24.0 bits (52), Expect = 7.5
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 104 YACEFCPLTFRHSSHLFRHRR 124
Y +F F R+R+
Sbjct: 35 YIDDFTLQYFGSKKQYERYRK 55
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 22.0 bits (46), Expect = 8.3
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 12 FTCQVCSKIFSYENGLKAHVRNKHG 36
F C C K F+ N + H N G
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAG 29
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 21.9 bits (46), Expect = 8.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 52 CDRVFTTRNMLNIHIKRDHQKEK 74
C R+F+ R LN H K H +K
Sbjct: 8 CGRIFSNRQYLNHHKKYQHIHQK 30
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 21.9 bits (46), Expect = 8.7
Identities = 12/28 (42%), Positives = 12/28 (42%)
Query: 73 EKPYQCSQCSKSFFSKYDHKIHSRVHTG 100
EKPY C C F K H R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
>d1u60a_ e.3.1.2 (A:) Probable glutaminase YbaS {Escherichia coli
[TaxId: 562]}
Length = 309
Score = 23.6 bits (51), Expect = 9.0
Identities = 3/12 (25%), Positives = 6/12 (50%)
Query: 12 FTCQVCSKIFSY 23
F + SK+ +
Sbjct: 61 FALESISKVCTL 72
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 23.3 bits (50), Expect = 9.6
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 101 EKPYACEFCPLTFRHSSHLFRHRRSLHQ 128
+ C FC F + F H + HQ
Sbjct: 13 RQHTPCLFCDRLFASAEETFSHCKLEHQ 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.135 0.440
Gapped
Lambda K H
0.267 0.0616 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 500,797
Number of extensions: 22471
Number of successful extensions: 278
Number of sequences better than 10.0: 1
Number of HSP's gapped: 266
Number of HSP's successfully gapped: 148
Length of query: 132
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 56
Effective length of database: 1,364,116
Effective search space: 76390496
Effective search space used: 76390496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 48 (22.5 bits)