Query psy6631
Match_columns 704
No_of_seqs 426 out of 2381
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 23:08:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 1.1E-68 3.8E-73 622.6 19.0 455 33-549 96-619 (632)
2 3nd0_A SLL0855 protein; CLC fa 100.0 2.9E-46 9.9E-51 418.3 24.0 290 52-403 149-444 (466)
3 1ots_A Voltage-gated CLC-type 100.0 5.7E-46 1.9E-50 416.7 25.6 294 52-403 153-452 (465)
4 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 1.5E-45 5.1E-50 411.1 25.0 294 52-403 138-437 (446)
5 3ddj_A CBS domain-containing p 99.6 1.2E-16 4E-21 167.3 4.4 183 420-637 92-276 (296)
6 3kh5_A Protein MJ1225; AMPK, A 99.6 1.1E-16 3.6E-21 165.3 1.5 188 420-637 83-272 (280)
7 2yzq_A Putative uncharacterize 99.6 1.6E-15 5.3E-20 157.1 6.5 201 420-637 59-270 (282)
8 2yzq_A Putative uncharacterize 99.6 3.3E-15 1.1E-19 154.6 8.1 172 421-637 1-175 (282)
9 4esy_A CBS domain containing m 99.5 9.1E-15 3.1E-19 141.0 8.1 118 418-549 15-156 (170)
10 3org_A CMCLC; transporter, tra 99.5 4.7E-14 1.6E-18 163.9 14.9 194 162-391 7-211 (632)
11 3ddj_A CBS domain-containing p 99.5 4.1E-15 1.4E-19 155.5 2.2 180 419-643 18-213 (296)
12 3kh5_A Protein MJ1225; AMPK, A 99.5 1.4E-14 4.7E-19 149.4 3.5 173 422-637 4-196 (280)
13 3t4n_C Nuclear protein SNF4; C 99.4 1.5E-14 5.1E-19 153.1 0.5 188 421-637 114-311 (323)
14 2v8q_E 5'-AMP-activated protei 99.4 5.1E-14 1.8E-18 149.6 2.1 180 423-637 120-314 (330)
15 3nqr_A Magnesium and cobalt ef 99.3 2.6E-12 8.7E-17 117.5 8.8 117 420-550 2-121 (127)
16 3oi8_A Uncharacterized protein 99.3 3.2E-12 1.1E-16 121.5 9.6 117 418-549 35-154 (156)
17 3gby_A Uncharacterized protein 99.3 1.3E-12 4.5E-17 119.4 6.5 117 420-551 4-122 (128)
18 3jtf_A Magnesium and cobalt ef 99.3 4.7E-12 1.6E-16 116.2 10.2 116 420-551 4-122 (129)
19 2qrd_G Protein C1556.08C; AMPK 99.3 2.1E-13 7.3E-18 144.9 1.3 185 424-637 110-306 (334)
20 2v8q_E 5'-AMP-activated protei 99.3 2.1E-13 7.1E-18 144.9 1.0 185 418-637 32-242 (330)
21 3k2v_A Putative D-arabinose 5- 99.3 1.3E-12 4.4E-17 122.8 5.9 115 421-549 28-146 (149)
22 3lfr_A Putative metal ION tran 99.3 4.6E-12 1.6E-16 117.4 9.1 117 420-550 2-122 (136)
23 4gqw_A CBS domain-containing p 99.3 2.8E-12 9.6E-17 119.7 7.6 119 420-552 4-140 (152)
24 2d4z_A Chloride channel protei 99.3 1.2E-12 4.2E-17 134.9 5.6 128 412-551 4-242 (250)
25 3kpb_A Uncharacterized protein 99.3 1.2E-12 4.1E-17 118.1 4.8 116 421-552 1-117 (122)
26 3lv9_A Putative transporter; C 99.3 1.8E-12 6.1E-17 121.6 6.2 120 417-551 19-141 (148)
27 2p9m_A Hypothetical protein MJ 99.3 3.3E-12 1.1E-16 117.7 7.8 120 418-551 5-132 (138)
28 2yzi_A Hypothetical protein PH 99.3 5.5E-12 1.9E-16 116.4 9.0 119 418-551 4-125 (138)
29 3fhm_A Uncharacterized protein 99.3 1.7E-12 5.7E-17 124.3 5.4 124 416-553 19-148 (165)
30 1pbj_A Hypothetical protein; s 99.3 1.6E-12 5.4E-17 117.6 4.7 116 421-551 1-118 (125)
31 2o16_A Acetoin utilization pro 99.3 1.7E-12 5.9E-17 123.7 5.1 118 420-551 4-131 (160)
32 2rih_A Conserved protein with 99.3 3.9E-12 1.3E-16 118.1 7.4 116 420-550 4-123 (141)
33 2ef7_A Hypothetical protein ST 99.3 3.2E-12 1.1E-16 117.2 6.7 118 419-551 2-121 (133)
34 1y5h_A Hypothetical protein RV 99.3 2.1E-12 7.3E-17 118.4 5.4 119 419-551 6-127 (133)
35 3hf7_A Uncharacterized CBS-dom 99.3 1.8E-12 6.2E-17 119.3 4.9 116 421-550 2-122 (130)
36 3lqn_A CBS domain protein; csg 99.3 3.5E-12 1.2E-16 119.6 6.5 120 416-551 10-139 (150)
37 3t4n_C Nuclear protein SNF4; C 99.3 5.6E-13 1.9E-17 141.0 0.7 188 419-643 28-247 (323)
38 3i8n_A Uncharacterized protein 99.3 1.4E-12 4.8E-17 119.7 3.2 119 418-550 3-124 (130)
39 3sl7_A CBS domain-containing p 99.3 4.6E-12 1.6E-16 122.0 7.0 118 420-551 3-152 (180)
40 3fv6_A YQZB protein; CBS domai 99.3 5E-12 1.7E-16 120.2 6.6 120 417-551 13-140 (159)
41 3lhh_A CBS domain protein; str 99.2 6E-12 2.1E-16 121.6 6.6 119 418-551 39-160 (172)
42 2pfi_A Chloride channel protei 99.2 3.2E-12 1.1E-16 121.2 4.5 122 418-551 10-143 (164)
43 2rc3_A CBS domain; in SITU pro 99.2 6.2E-12 2.1E-16 115.7 6.2 116 421-551 6-127 (135)
44 3k6e_A CBS domain protein; str 99.2 8.9E-12 3.1E-16 119.0 6.7 113 422-550 16-137 (156)
45 2j9l_A Chloride channel protei 99.2 3.7E-12 1.3E-16 123.3 4.0 122 416-551 6-161 (185)
46 1pvm_A Conserved hypothetical 99.2 1.3E-11 4.6E-16 120.2 8.0 119 420-552 8-130 (184)
47 3oco_A Hemolysin-like protein 99.2 5E-12 1.7E-16 119.4 4.7 118 419-551 18-139 (153)
48 2emq_A Hypothetical conserved 99.2 1.4E-11 4.9E-16 116.1 7.6 119 417-551 7-135 (157)
49 2qrd_G Protein C1556.08C; AMPK 99.2 2.2E-12 7.4E-17 137.1 2.1 183 418-637 19-234 (334)
50 1o50_A CBS domain-containing p 99.2 7.5E-12 2.5E-16 118.6 5.4 120 416-551 11-149 (157)
51 1yav_A Hypothetical protein BS 99.2 9.2E-12 3.2E-16 118.1 5.4 118 418-551 11-138 (159)
52 3ctu_A CBS domain protein; str 99.2 8.5E-12 2.9E-16 117.8 4.1 116 420-551 14-138 (156)
53 1vr9_A CBS domain protein/ACT 99.2 8.3E-11 2.8E-15 117.9 11.3 113 421-551 13-126 (213)
54 3kxr_A Magnesium transporter, 99.2 7.8E-11 2.7E-15 117.7 10.4 117 420-553 53-172 (205)
55 4fry_A Putative signal-transdu 99.1 1.7E-11 5.8E-16 115.9 4.4 118 421-553 7-133 (157)
56 2d4z_A Chloride channel protei 99.1 6.4E-12 2.2E-16 129.6 0.8 151 492-646 8-248 (250)
57 2uv4_A 5'-AMP-activated protei 99.1 5E-11 1.7E-15 112.2 5.2 120 416-551 18-147 (152)
58 3pc3_A CG1753, isoform A; CBS, 99.1 9.4E-11 3.2E-15 133.4 7.7 141 395-553 360-509 (527)
59 2nyc_A Nuclear protein SNF4; b 99.1 6.9E-11 2.4E-15 109.3 4.8 118 420-551 7-137 (144)
60 3l2b_A Probable manganase-depe 99.0 9.1E-11 3.1E-15 119.6 4.5 116 420-549 6-238 (245)
61 3ocm_A Putative membrane prote 99.0 1.2E-10 4.3E-15 112.9 5.0 117 419-551 34-153 (173)
62 2oux_A Magnesium transporter; 99.0 4.6E-10 1.6E-14 117.7 7.4 116 420-552 136-256 (286)
63 2yvy_A MGTE, Mg2+ transporter 99.0 7.8E-10 2.7E-14 115.3 8.3 117 420-553 134-255 (278)
64 2zy9_A Mg2+ transporter MGTE; 98.9 2.5E-09 8.7E-14 120.0 7.8 117 420-553 154-275 (473)
65 4esy_A CBS domain containing m 98.9 9.2E-11 3.2E-15 112.8 -3.4 134 495-637 16-153 (170)
66 3gby_A Uncharacterized protein 98.8 1.9E-09 6.5E-14 98.2 5.4 114 495-637 3-117 (128)
67 3lv9_A Putative transporter; C 98.8 9.8E-10 3.3E-14 102.7 3.1 113 494-637 20-136 (148)
68 3usb_A Inosine-5'-monophosphat 98.8 3E-09 1E-13 120.3 7.2 116 421-553 113-232 (511)
69 3lhh_A CBS domain protein; str 98.8 2E-09 6.7E-14 103.8 4.0 112 495-637 40-155 (172)
70 3jtf_A Magnesium and cobalt ef 98.8 9.9E-10 3.4E-14 100.5 1.6 111 495-637 3-117 (129)
71 3hf7_A Uncharacterized CBS-dom 98.8 1.3E-09 4.5E-14 100.0 1.6 113 497-637 2-118 (130)
72 4fxs_A Inosine-5'-monophosphat 98.8 1.5E-09 5.2E-14 122.4 2.2 113 421-550 89-204 (496)
73 3nqr_A Magnesium and cobalt ef 98.7 3.1E-09 1.1E-13 96.8 2.6 112 496-637 2-117 (127)
74 2ef7_A Hypothetical protein ST 98.7 3.4E-09 1.2E-13 96.8 2.9 113 496-637 3-116 (133)
75 3lfr_A Putative metal ION tran 98.7 4.1E-09 1.4E-13 97.3 2.8 113 496-637 2-118 (136)
76 1vrd_A Inosine-5'-monophosphat 98.7 1.4E-09 4.9E-14 122.6 -0.5 114 421-551 95-211 (494)
77 4avf_A Inosine-5'-monophosphat 98.7 2.3E-09 7.7E-14 120.8 -0.0 111 421-549 88-201 (490)
78 4gqw_A CBS domain-containing p 98.7 2.9E-09 1E-13 99.0 0.7 128 495-637 3-134 (152)
79 1jcn_A Inosine monophosphate d 98.7 2.5E-09 8.7E-14 121.2 -0.1 167 359-563 47-229 (514)
80 1zfj_A Inosine monophosphate d 98.7 2.4E-08 8.2E-13 112.5 7.7 115 422-553 91-209 (491)
81 3i8n_A Uncharacterized protein 98.6 6E-09 2.1E-13 95.2 2.0 113 495-637 4-120 (130)
82 4af0_A Inosine-5'-monophosphat 98.6 3.2E-09 1.1E-13 118.3 -0.1 111 423-548 140-251 (556)
83 3k6e_A CBS domain protein; str 98.6 1.4E-08 4.6E-13 96.8 3.8 115 497-637 15-133 (156)
84 3kpb_A Uncharacterized protein 98.6 8.3E-09 2.8E-13 92.6 2.2 108 498-637 2-111 (122)
85 1ots_A Voltage-gated CLC-type 98.6 9.1E-07 3.1E-11 99.0 18.9 185 163-391 33-232 (465)
86 3kxr_A Magnesium transporter, 98.6 2E-08 6.8E-13 100.2 4.9 109 496-637 53-165 (205)
87 1me8_A Inosine-5'-monophosphat 98.6 3.5E-09 1.2E-13 119.7 -0.6 120 420-563 95-217 (503)
88 3oi8_A Uncharacterized protein 98.6 8.4E-09 2.9E-13 97.6 2.1 112 495-637 36-151 (156)
89 2rih_A Conserved protein with 98.6 1.5E-08 5.3E-13 93.6 3.5 112 496-637 4-119 (141)
90 3lqn_A CBS domain protein; csg 98.6 1.6E-08 5.6E-13 94.3 3.4 119 494-637 12-134 (150)
91 3fv6_A YQZB protein; CBS domai 98.6 3.2E-08 1.1E-12 93.7 5.4 125 494-647 14-147 (159)
92 1o50_A CBS domain-containing p 98.6 2.5E-08 8.5E-13 94.2 3.7 131 494-637 13-144 (157)
93 3nd0_A SLL0855 protein; CLC fa 98.5 3.1E-06 1.1E-10 94.6 20.7 184 163-391 29-227 (466)
94 1pbj_A Hypothetical protein; s 98.5 7E-09 2.4E-13 93.4 -0.6 111 498-637 2-113 (125)
95 2p9m_A Hypothetical protein MJ 98.5 2.6E-08 8.9E-13 91.3 3.1 114 495-637 6-127 (138)
96 2o16_A Acetoin utilization pro 98.5 1.3E-08 4.6E-13 96.5 0.9 120 496-637 4-126 (160)
97 2rc3_A CBS domain; in SITU pro 98.5 1.9E-08 6.6E-13 92.1 1.9 111 498-637 7-122 (135)
98 3fhm_A Uncharacterized protein 98.5 8.4E-09 2.9E-13 98.4 -0.8 115 495-637 22-141 (165)
99 1pvm_A Conserved hypothetical 98.5 3.4E-08 1.2E-12 95.9 3.5 116 495-637 7-124 (184)
100 3ctu_A CBS domain protein; str 98.5 5.5E-08 1.9E-12 91.5 4.7 126 495-646 13-144 (156)
101 2emq_A Hypothetical conserved 98.5 6E-08 2.1E-12 91.0 4.9 118 495-637 9-130 (157)
102 3sl7_A CBS domain-containing p 98.5 9.1E-09 3.1E-13 98.7 -1.0 137 496-637 3-147 (180)
103 3oco_A Hemolysin-like protein 98.5 1.4E-08 4.9E-13 95.5 0.3 112 495-637 18-134 (153)
104 4fry_A Putative signal-transdu 98.5 1.6E-08 5.4E-13 95.3 0.3 113 497-637 7-126 (157)
105 3ghd_A A cystathionine beta-sy 98.5 9.2E-08 3.2E-12 78.9 4.5 66 431-510 2-70 (70)
106 1yav_A Hypothetical protein BS 98.5 4.2E-08 1.4E-12 92.7 2.7 118 495-637 12-133 (159)
107 3k2v_A Putative D-arabinose 5- 98.5 3.4E-08 1.2E-12 92.4 1.7 113 496-637 27-143 (149)
108 2yzi_A Hypothetical protein PH 98.4 1E-07 3.5E-12 87.5 3.4 113 495-637 5-120 (138)
109 1vr9_A CBS domain protein/ACT 98.4 1.1E-07 3.9E-12 94.9 3.9 115 496-644 12-130 (213)
110 4ene_A CLC-EC1, H(+)/CL(-) exc 98.4 2.5E-05 8.6E-10 86.8 23.0 185 162-392 17-218 (446)
111 1y5h_A Hypothetical protein RV 98.4 2.3E-08 8E-13 91.2 -1.3 113 496-637 7-122 (133)
112 2pfi_A Chloride channel protei 98.4 1.8E-07 6.2E-12 88.1 4.8 118 495-637 11-138 (164)
113 3ocm_A Putative membrane prote 98.4 1.1E-07 3.8E-12 91.9 3.4 112 494-637 33-148 (173)
114 2cu0_A Inosine-5'-monophosphat 98.4 4.3E-08 1.5E-12 110.4 0.0 145 359-538 32-190 (486)
115 3l2b_A Probable manganase-depe 98.3 9.8E-08 3.4E-12 97.0 1.4 56 495-551 5-61 (245)
116 2nyc_A Nuclear protein SNF4; b 98.3 1.4E-07 4.9E-12 86.7 1.7 115 495-637 6-132 (144)
117 2oux_A Magnesium transporter; 98.3 1.1E-07 3.7E-12 99.6 0.7 110 495-637 135-250 (286)
118 2yvy_A MGTE, Mg2+ transporter 98.3 4.2E-07 1.5E-11 94.5 5.0 109 496-637 134-248 (278)
119 2uv4_A 5'-AMP-activated protei 98.2 3.6E-07 1.2E-11 85.6 3.2 114 495-637 21-142 (152)
120 2j9l_A Chloride channel protei 98.2 1.6E-07 5.6E-12 90.4 0.5 135 495-637 9-156 (185)
121 3fio_A A cystathionine beta-sy 98.2 8.7E-07 3E-11 71.7 3.4 65 431-509 2-69 (70)
122 2zy9_A Mg2+ transporter MGTE; 98.0 8.1E-07 2.8E-11 99.6 1.0 110 495-637 153-268 (473)
123 3pc3_A CG1753, isoform A; CBS, 98.0 9.3E-07 3.2E-11 100.4 0.5 114 494-637 381-502 (527)
124 1vrd_A Inosine-5'-monophosphat 97.8 3.2E-06 1.1E-10 95.2 0.6 108 497-637 95-206 (494)
125 1me8_A Inosine-5'-monophosphat 97.7 2.6E-06 8.8E-11 96.2 -1.6 108 498-637 97-212 (503)
126 4fxs_A Inosine-5'-monophosphat 97.7 6.9E-06 2.3E-10 92.6 1.3 108 497-637 89-200 (496)
127 1jcn_A Inosine monophosphate d 97.7 7E-06 2.4E-10 92.9 1.2 110 497-637 108-224 (514)
128 4avf_A Inosine-5'-monophosphat 97.6 6.9E-06 2.3E-10 92.4 0.0 108 497-637 88-198 (490)
129 1zfj_A Inosine monophosphate d 97.5 6.6E-05 2.2E-09 84.3 4.7 107 498-637 91-202 (491)
130 3usb_A Inosine-5'-monophosphat 97.4 3.1E-05 1.1E-09 87.5 1.7 108 497-637 113-225 (511)
131 2cu0_A Inosine-5'-monophosphat 97.2 6.2E-05 2.1E-09 84.6 0.1 110 498-642 94-206 (486)
132 4af0_A Inosine-5'-monophosphat 96.8 0.00019 6.5E-09 80.2 0.1 104 500-637 141-249 (556)
133 3ghd_A A cystathionine beta-sy 96.7 0.0022 7.7E-08 52.4 5.7 44 507-551 2-45 (70)
134 3fio_A A cystathionine beta-sy 94.0 0.11 3.6E-06 41.1 6.2 45 507-552 2-46 (70)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=1.1e-68 Score=622.57 Aligned_cols=455 Identities=25% Similarity=0.410 Sum_probs=353.9
Q ss_pred hhhhccccceE--Eeeeeehh-------------hhhhhhcccccc--cccCCCcccccccccccccCCCCCcccchhhh
Q psy6631 33 LKHWTTRNTDV--FVSLACFM-------------LYTVCCSALKSP--QCISPSEITGEDSLTKIEKFPEGRAPLVVYEF 95 (704)
Q Consensus 33 ~~~~~~~~~~i--~~~~~~~~-------------h~~~~~a~~~~~--~~~~~~~i~g~~~~~~~~~l~~~~gaAAGvaA 95 (704)
+++++..|+.+ +++.++++ |+|+++|+.+++ ++. ... .+.-.++..+ .||+|||+||
T Consensus 96 ~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~---~~~-~~~~~~r~ll--~aGaaAG~aa 169 (632)
T 3org_A 96 MRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFK---ELC-TDRALRLQTL--AAACAVGLAS 169 (632)
T ss_dssp HGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHH---HHH-HSHHHHHHHH--HHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhc---ccc-CCHHHHHHHH--HHHHHHHHHH
Confidence 56778888887 55555555 999999998877 442 111 1111122222 2699999999
Q ss_pred hhcccccccccceeeeccccchHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccCCCCCCChhHHHHHHHHHHH
Q psy6631 96 LKGALYKGVLFSIEVTTVYFAIRNYWRGFFTAVCGATVFRLLAVWFYNEETMRAFFPTNFTMDFPFDPQELTVFALIGVV 175 (704)
Q Consensus 96 aF~APIgGvLFalEv~~~~~~~~~~~~~f~aav~a~~v~~~l~~~~~~~~~~~~~F~~~~~~~~~~~~~el~~~illGi~ 175 (704)
+|||||||++|++||++++|+.+++|++++||++|+++++.+.. ..+...+|..+|..+.+|+..|+ +|+++|++
T Consensus 170 aF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l-~~~~lGi~ 244 (632)
T 3org_A 170 SFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYELLYT----TPLVEAFEGTNFDASDVSRTQTL-LYAILGAL 244 (632)
T ss_dssp HHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC----------------------CCCCSCTH-HHHHHHHH
T ss_pred HhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcc----CccccccccccccccCCCcHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999987643 22222356555554567788899 99999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcchhHHHHHHHHHHHHHHhhhhhccccCCCCCcHHHHHHhhhcCccCCCC
Q psy6631 176 CGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKNRFLYPGIVVLLATSVSFPLGLGKYMAGDLNTHDQLSSLFSNFTWTKGH 255 (704)
Q Consensus 176 ~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~~~l~p~l~gllvg~l~fP~~~G~~~~g~l~~~~~i~~lf~~~~~~~~~ 255 (704)
||++|++|+++++++..+ | .+++++.+++++++++++++++++||.+.|.+ ++++.+..+|++++|.+..
T Consensus 245 ~Gl~g~~f~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~l~~p~~~g~~-----~~~~~i~~l~~~~~~~~~~ 314 (632)
T 3org_A 245 MGVLGALFIRCVRSIYEL-R----MRHYPGTNRYFLVGVVALFASALQYPFRLFAL-----DPRATINDLFKAVPLYQTD 314 (632)
T ss_dssp HHHHHHHHHHHHHHHHHH-H----HHSSTTCCTHHHHHHHHHHHHHHTTTC-----------CHHHHHHHHSCC------
T ss_pred HHHHHHHHHHHHHHHHHH-H----HHhhcchhHHHHHHHHHHHHHHHHHHHHhcCC-----cHHHHHHHHHcCCcccccc
Confidence 999999999999887644 1 23445667899999999999988999886653 4578999999887654311
Q ss_pred cchhhHhhhhhcccCCcchHHHHHHHHHHHHHHHHHHhhCCccccccchhhHHHHHHHHHHHHHHHHhcCCCccCCCccC
Q psy6631 256 FTVEEQEVLKHWTTRNTDVFVSLACFMLYTYIFSIIASTIPVPSGSFIPVFKIGAAFGRMIGEIIFLRFPDGITHGKFIA 335 (704)
Q Consensus 256 ~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~~t~lt~g~g~pGGiF~Psl~IGA~~G~~~G~~~~~~~p~~~~~~~~~~ 335 (704)
...+..|++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++.++|.+
T Consensus 315 ----------------~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~~~g~~~~~~~p~~-------- 370 (632)
T 3org_A 315 ----------------HFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLYGELMRVVFGNA-------- 370 (632)
T ss_dssp --------------------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHHHHHHHHHHHHCTT--------
T ss_pred ----------------chhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHhCCcc--------
Confidence 11122456788999999999999999999999999999999999999999999863
Q ss_pred CcchHHHHHHHHHHHHHHhhhhhHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhcCCChHHHHHHHhcCCCCCCCCCCC
Q psy6631 336 PIIPGGYATVGAAAFSGAVTHTISVSVIMFEMTGQITHIIPVMIAVLISNAVAALLQPSLYDSIILIKKLPYLPDLLPSS 415 (704)
Q Consensus 336 ~~~p~~yAlvGmaAf~aav~~~is~~viv~ElTG~~~~~lPimia~~is~~va~~l~~siy~~~l~~r~~p~l~~~~~~~ 415 (704)
.+|+.||++||||++||++|++++++|++||||++++++|+|+++++||++++.+++|+|+.+++.|++|++++..+.
T Consensus 371 -~~p~~~a~vGmaa~~~~v~~ap~t~vi~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~~iY~~~~~~k~lp~l~~~~~~- 448 (632)
T 3org_A 371 -IVPGSYAVVGAAAFTAGVTRALSCAVIIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRD- 448 (632)
T ss_dssp -SCHHHHHHHHHHHHHHHHSCCTTHHHHHHHHTCCCSCSHHHHHHHHHHHHHHHHHCCCHHHHHHHHTTCCEEEEECTT-
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCcccccccc-
Confidence 479999999999999999996555679999999999999999999999999999999999999999999998765332
Q ss_pred ccccccccccccc--cceEEecCCCCHHHHHHHHH-hcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc
Q psy6631 416 SGIYNVYVEDFMV--RDVKYIWNNMTYRDLKNLLK-ENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS 492 (704)
Q Consensus 416 ~~l~~~~V~diM~--~~v~~v~~~~tl~ea~~~l~-~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~ 492 (704)
..++++|+|+|+ +++.+++++++++|+.+.++ ++ +++++||||++ ++++|+|+++|++.....
T Consensus 449 -~~~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~-~~~~~PVvd~~------------~~lvGiVt~~DL~~~l~~ 514 (632)
T 3org_A 449 -RSPEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFP-NRLVFPVIDAN------------GYLLGAISRKEIVDRLQH 514 (632)
T ss_dssp -CCTTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHST-TCCEECBBCTT------------CBBCCEESHHHHTTTTTT
T ss_pred -ccccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcC-CcceEEEEecC------------CeEEEEEEHHHHHHHHHH
Confidence 237899999999 89999999999999999999 67 89999999977 799999999999754321
Q ss_pred c-------------------------------------------------ccccccccccccCceEEeCCCCHHHHHHHh
Q psy6631 493 G-------------------------------------------------IYNVYVEDFMVRDVKYIWNNMTYRDLKNLL 523 (704)
Q Consensus 493 ~-------------------------------------------------~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m 523 (704)
. ....+|+|+|++++.++++|+++.|+++.|
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M 594 (632)
T 3org_A 515 VLEDVPEPIAGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLF 594 (632)
T ss_dssp C-------------------------------------------------------CCSCCCCCCEEETTCBHHHHHHHH
T ss_pred HhhhcccccccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHH
Confidence 1 001148899999999999999999999999
Q ss_pred HhcCCCceeecccCCCceEEeehHHH
Q psy6631 524 KENRSLRVFPLVESSGKFEQMEIKRR 549 (704)
Q Consensus 524 ~~~~rl~Vvpvv~~~~~~~~i~~~~~ 549 (704)
. .++.+.+||+|+++.+|.+++.|+
T Consensus 595 ~-~~~i~~lpVve~G~lvGIVT~~Dl 619 (632)
T 3org_A 595 V-MLMPSMIYVTERGKLVGIVEREDV 619 (632)
T ss_dssp H-HTCCSEEEEEETTEEEEEEEGGGT
T ss_pred H-hcCCCEEEEEECCEEEEEEehhhH
Confidence 5 577888999977766676666653
No 2
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=2.9e-46 Score=418.31 Aligned_cols=290 Identities=14% Similarity=0.161 Sum_probs=240.7
Q ss_pred hhhhhhcccccccccCCCcccccccccccccCCCCCcccchhhhhhcccccccccceeeecccc--chHHHHHHHHHHHH
Q psy6631 52 LYTVCCSALKSPQCISPSEITGEDSLTKIEKFPEGRAPLVVYEFLKGALYKGVLFSIEVTTVYF--AIRNYWRGFFTAVC 129 (704)
Q Consensus 52 h~~~~~a~~~~~~~~~~~~i~g~~~~~~~~~l~~~~gaAAGvaAaF~APIgGvLFalEv~~~~~--~~~~~~~~f~aav~ 129 (704)
|+|+++++.+++++. .. +++ ++.-+ .||+|||+||+|||||||++|++||+.++| +.+.++|+++||++
T Consensus 149 qiGa~ig~~l~~~~~----~~-~~~--~r~ll--~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~ 219 (466)
T 3nd0_A 149 QMGGSIGQMTGGWFK----AT-QEN--QRILI--AVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVM 219 (466)
T ss_dssp HHHHHHHHHHHHHTT----CC-HHH--HHHHH--HHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC----CC-hhH--HHHHH--HHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHH
Confidence 999999999999874 11 111 11112 369999999999999999999999999888 45778899999999
Q ss_pred HHHHHHHHHhhhccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcchh
Q psy6631 130 GATVFRLLAVWFYNEETMRAFFPTNFTMDFPFDPQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKNRF 209 (704)
Q Consensus 130 a~~v~~~l~~~~~~~~~~~~~F~~~~~~~~~~~~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~~~ 209 (704)
|+++++.+. +.++ .|..+. ...++..|+++++++|++||++|.+|++.+.+..+++++ +.+.+++
T Consensus 220 a~~v~~~~~----g~~~---~f~~~~--~~~~~~~~l~~~illGi~~Gl~g~lf~~~~~~~~~~~~~------~~~~~~~ 284 (466)
T 3nd0_A 220 ATIILRMIR----GQSA---IISLTE--FKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDR------LPPLATK 284 (466)
T ss_dssp HHHHHHHHT----CSSC---SSCCTT--CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CCHHHHH
T ss_pred HHHHHHHHc----CCCC---ceecCC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccccHH
Confidence 999999873 2343 455432 113578899999999999999999999999887655442 1224578
Q ss_pred HHHHHHHHHHHHH--HhhhhhccccCCCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHH
Q psy6631 210 LYPGIVVLLATSV--SFPLGLGKYMAGDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYI 287 (704)
Q Consensus 210 l~p~l~gllvg~l--~fP~~~G~~~~g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~ 287 (704)
+++++++++++++ .+|..+|. +++.+++++++ +..+..|++++++|++
T Consensus 285 ~~~~l~g~~~g~l~~~~p~~~G~-------G~~~i~~~~~~-----------------------~~~~~~L~~~~~~K~~ 334 (466)
T 3nd0_A 285 WKGFLLGSIIGILSLFPLPLTDG-------GDNAVLWAFNS-----------------------QSHFSTLILVFCGRFL 334 (466)
T ss_dssp HHHHHHHHHHHHHTTSSSSCSSS-------SHHHHHHHTTS-----------------------CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-------cHHHHHHHHcC-----------------------CccHHHHHHHHHHHHH
Confidence 8899999999987 46776665 37888877753 1235577888999999
Q ss_pred HHHHHhhCCccccccchhhHHHHHHHHHHHHHHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHH
Q psy6631 288 FSIIASTIPVPSGSFIPVFKIGAAFGRMIGEIIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFE 366 (704)
Q Consensus 288 ~t~lt~g~g~pGGiF~Psl~IGA~~G~~~G~~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~E 366 (704)
+|++|+|+|+|||+|+|+|++||++|+++|.+++.++|.. ..+|+.||++||+|++++++| |+|+++|++|
T Consensus 335 ~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~--------~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~E 406 (466)
T 3nd0_A 335 LTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPSQ--------IPEPAVMAIAGMGALVAATVRAPLTAILLTIE 406 (466)
T ss_dssp HHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHHCTTT--------CSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHhCCcc--------ccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999863 368999999999999999999 8999999999
Q ss_pred HhCCchhHHHHHHHHHHHHHHHhhcC-CChHHHHHHHh
Q psy6631 367 MTGQITHIIPVMIAVLISNAVAALLQ-PSLYDSIILIK 403 (704)
Q Consensus 367 lTG~~~~~lPimia~~is~~va~~l~-~siy~~~l~~r 403 (704)
|||++++++|+|+++++||++++.++ +|+||.++++-
T Consensus 407 ltg~~~~~lpl~ia~~iA~~v~~~~~~~~iY~~~l~r~ 444 (466)
T 3nd0_A 407 MTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLERT 444 (466)
T ss_dssp TTCCCTTHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHCChHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999999999999999985 79999998865
No 3
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=5.7e-46 Score=416.71 Aligned_cols=294 Identities=16% Similarity=0.196 Sum_probs=240.8
Q ss_pred hhhhhhcccccccccCCCcccccccccccccCCCCCcccchhhhhhcccccccccceeeeccccchHH--HHHHHHHHHH
Q psy6631 52 LYTVCCSALKSPQCISPSEITGEDSLTKIEKFPEGRAPLVVYEFLKGALYKGVLFSIEVTTVYFAIRN--YWRGFFTAVC 129 (704)
Q Consensus 52 h~~~~~a~~~~~~~~~~~~i~g~~~~~~~~~l~~~~gaAAGvaAaF~APIgGvLFalEv~~~~~~~~~--~~~~f~aav~ 129 (704)
|+|+++++.+++++. .. +.-.++..+ .||+|||+||+|||||||++|++||+.++|+.+. ++++++||++
T Consensus 153 qiGa~ig~~l~~~~~----l~--~~~~~r~li--~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~ 224 (465)
T 1ots_A 153 QIGGNIGRMVLDIFR----LK--GDEARHTLL--ATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIM 224 (465)
T ss_dssp HHHHHHHHHHHHHTT----CC--SHHHHHHHH--HHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----cC--CHHHHHHHH--HHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999999998773 11 111111112 2589999999999999999999999999998766 9999999999
Q ss_pred HHHHHHHHHhhhccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcchh
Q psy6631 130 GATVFRLLAVWFYNEETMRAFFPTNFTMDFPFDPQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKNRF 209 (704)
Q Consensus 130 a~~v~~~l~~~~~~~~~~~~~F~~~~~~~~~~~~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~~~ 209 (704)
|+++++.+. +.++ .|..+.. ..++..++++++++|++||++|.+|++.+.+..+++++.+ +.-..+++
T Consensus 225 a~~v~~~~~----G~~~---~f~~~~~--~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~---~~~~~~~~ 292 (465)
T 1ots_A 225 STIMYRIFN----HEVA---LIDVGKL--SDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVH---GGNITKWV 292 (465)
T ss_dssp HHHHHHHHS----CSCC---SSCCCCC--CCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCHHHHH
T ss_pred HHHHHHHHc----CCCc---eeecCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCchhHH
Confidence 999999863 2333 4543321 1245789999999999999999999999988876554321 11112345
Q ss_pred HHHHHHHHHHHHH--HhhhhhccccCCCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHH
Q psy6631 210 LYPGIVVLLATSV--SFPLGLGKYMAGDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYI 287 (704)
Q Consensus 210 l~p~l~gllvg~l--~fP~~~G~~~~g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~ 287 (704)
+++++++++++++ .+|..+|.+ ++.++.+|++ +..+..++.++++|++
T Consensus 293 ~~~~i~gl~~g~l~~~~P~~lG~G-------~~~i~~~~~~-----------------------~~~~~~l~~~~~~K~~ 342 (465)
T 1ots_A 293 LMGGAIGGLCGLLGFVAPATSGGG-------FNLIPIATAG-----------------------NFSMGMLVFIFVARVI 342 (465)
T ss_dssp HHHHHHHHHHHHHHHHCGGGSSCS-------TTHHHHHHHT-----------------------CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHhhcCCh-------HHHHHHHHcC-----------------------CchHHHHHHHHHHHHH
Confidence 8999999999976 468777653 6778877753 1234567788999999
Q ss_pred HHHHHhhCCccccccchhhHHHHHHHHHHHHHHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHH
Q psy6631 288 FSIIASTIPVPSGSFIPVFKIGAAFGRMIGEIIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFE 366 (704)
Q Consensus 288 ~t~lt~g~g~pGGiF~Psl~IGA~~G~~~G~~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~E 366 (704)
+|++|+|+|+|||+|+|+|++||++|+++|.+++.++|+. ..+|+.||++||+|++++++| |+|+++|++|
T Consensus 343 ~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~--------~~~~~~~alvGmaa~~a~v~raPlt~ivlv~E 414 (465)
T 1ots_A 343 TTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQY--------HLEAGTFAIAGMGALLAASIRAPLTGIILVLE 414 (465)
T ss_dssp HHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGG--------TCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCcc--------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999863 368999999999999999999 8999999999
Q ss_pred HhCCchhHHHHHHHHHHHHHHHhhcC-CChHHHHHHHh
Q psy6631 367 MTGQITHIIPVMIAVLISNAVAALLQ-PSLYDSIILIK 403 (704)
Q Consensus 367 lTG~~~~~lPimia~~is~~va~~l~-~siy~~~l~~r 403 (704)
|||++++++|+|+++++||++++.++ +|+|+.|++++
T Consensus 415 ltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 415 MTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999999999999999985 79999999876
No 4
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=1.5e-45 Score=411.14 Aligned_cols=294 Identities=16% Similarity=0.198 Sum_probs=234.4
Q ss_pred hhhhhhcccccccccCCCcccccccccccccCCCCCcccchhhhhhcccccccccceeeeccccch--HHHHHHHHHHHH
Q psy6631 52 LYTVCCSALKSPQCISPSEITGEDSLTKIEKFPEGRAPLVVYEFLKGALYKGVLFSIEVTTVYFAI--RNYWRGFFTAVC 129 (704)
Q Consensus 52 h~~~~~a~~~~~~~~~~~~i~g~~~~~~~~~l~~~~gaAAGvaAaF~APIgGvLFalEv~~~~~~~--~~~~~~f~aav~ 129 (704)
|+|+++++.+++++. .. ++-+|..-+ .||+|||+||+|||||||++|++||+.++|++ ++++|+++||++
T Consensus 138 qiGa~ig~~~~~~~~----~~--~~~~r~~ll--~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~ 209 (446)
T 4ene_A 138 QIGGNIGRMVLDIFR----LK--GDEARHTLL--ATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIM 209 (446)
T ss_dssp HHHHHHHHHHHHHTT----CC--SHHHHHHHH--HHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC----CC--HHHHHHHHH--HHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence 999999999998774 11 111111112 36999999999999999999999999988877 789999999999
Q ss_pred HHHHHHHHHhhhccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcchh
Q psy6631 130 GATVFRLLAVWFYNEETMRAFFPTNFTMDFPFDPQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKNRF 209 (704)
Q Consensus 130 a~~v~~~l~~~~~~~~~~~~~F~~~~~~~~~~~~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~~~ 209 (704)
|+++++.+. +.++ .|..+.. ..++..++++++++|++||++|.+|++.+.+..+++++.+ +....+++
T Consensus 210 a~~v~~~~~----g~~~---~~~~~~~--~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~---~~~~~~~~ 277 (446)
T 4ene_A 210 STIMYRIFN----HEVA---LIDVGKL--SDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVH---GGNITKWV 277 (446)
T ss_dssp HHHHHHHTT----TTCC---SCCCCCC--CCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCHHHHH
T ss_pred HHHHHHHHc----CCCc---eeecCCC--CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccchhHHH
Confidence 999999863 2343 4543311 1246789999999999999999999999988776554321 11111122
Q ss_pred HHHHHHHHHHHHH--HhhhhhccccCCCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHH
Q psy6631 210 LYPGIVVLLATSV--SFPLGLGKYMAGDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYI 287 (704)
Q Consensus 210 l~p~l~gllvg~l--~fP~~~G~~~~g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~ 287 (704)
+.+.+++++++++ .+|..+|.+ ++.+++++++ +..+..|++++++|++
T Consensus 278 ~~~~l~g~~~g~l~~~~p~~~G~G-------~~~i~~~~~~-----------------------~~~~~~L~~~~~~K~~ 327 (446)
T 4ene_A 278 LMGGAIGGLCGLLGFVAPATSGGG-------FNLIPIATAG-----------------------NFSMGMLVFIFVARVI 327 (446)
T ss_dssp HHHHHHHHHHHHHHHHCGGGSSCC-------STHHHHHHTT-----------------------CSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHhhcCCc-------HHHHHHHHcC-----------------------CchHHHHHHHHHHHHH
Confidence 3334566677765 568777653 6677766642 1234567788999999
Q ss_pred HHHHHhhCCccccccchhhHHHHHHHHHHHHHHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHH
Q psy6631 288 FSIIASTIPVPSGSFIPVFKIGAAFGRMIGEIIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFE 366 (704)
Q Consensus 288 ~t~lt~g~g~pGGiF~Psl~IGA~~G~~~G~~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~E 366 (704)
+|++|+|+|+|||+|+|+|++||++|+++|.+++.++|.. ..+|+.||++||+|++++++| |+|+++|++|
T Consensus 328 ~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~--------~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~E 399 (446)
T 4ene_A 328 TTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQY--------HLEAGTFAIAGMGALLAASIRAPLTGIILVLE 399 (446)
T ss_dssp HHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGG--------TCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCCcc--------ccCHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 9999999999999999999999999999999999998863 368999999999999999998 8999999999
Q ss_pred HhCCchhHHHHHHHHHHHHHHHhhcC-CChHHHHHHHh
Q psy6631 367 MTGQITHIIPVMIAVLISNAVAALLQ-PSLYDSIILIK 403 (704)
Q Consensus 367 lTG~~~~~lPimia~~is~~va~~l~-~siy~~~l~~r 403 (704)
|||++++++|+|+++++||++++.++ +|+||.++++-
T Consensus 400 ltg~~~~~lpl~ia~~ia~~v~~~~~~~~iY~~~l~r~ 437 (446)
T 4ene_A 400 MTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 437 (446)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred HHCChhHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999999999999999995 79999988764
No 5
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.62 E-value=1.2e-16 Score=167.27 Aligned_cols=183 Identities=12% Similarity=0.141 Sum_probs=148.0
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYV 499 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V 499 (704)
..+|+|+|++++.++.+++++.++++.|.++ +++.+||+|++ ++++|+++.+|++..........+|
T Consensus 92 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~-~~~~lpVvd~~------------~~lvGivt~~dl~~~~~~~~~~~~v 158 (296)
T 3ddj_A 92 TTPIIDYMTPNPVTVYNTSDEFTAINIMVTR-NFGSLPVVDIN------------DKPVGIVTEREFLLLYKDLDEIFPV 158 (296)
T ss_dssp TSBGGGTSEESCCCEETTSCHHHHHHHHHHH-TCSEEEEECTT------------SCEEEEEEHHHHGGGGGGSCCCCBH
T ss_pred cccHHHhccCCCEEEcCCCCHHHHHHHHHHc-CCCEEEEEcCC------------CcEEEEEeHHHHHHhhhcccccccH
Confidence 4579999999999999999999999999998 89999999877 7899999999998765555566799
Q ss_pred ccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCCCC
Q psy6631 500 EDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVSAS 578 (704)
Q Consensus 500 ~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~~~ 578 (704)
+++|++++.++.+++++.++.+.|.+ .+...+||+| +++.+|.++..++..... ...+-+.. +...
T Consensus 159 ~~~m~~~~~~v~~~~~l~~~~~~m~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~--~~~~~~~~-~~~~--------- 225 (296)
T 3ddj_A 159 KVFMSTKVQTIYKEVRLDQAVKLMLR-RGFRRLPVIDDDNKVVGIVTVVNAIKQLA--KAVDKLDP-DYFY--------- 225 (296)
T ss_dssp HHHSBCSCCCEETTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHHHHH--HHHHHTCT-HHHH---------
T ss_pred HHhhcCCCeEECCCCCHHHHHHHHHH-cCCCEEEEEcCCCEEEEEEEHHHHHHHHH--HHHhhcCh-hhhc---------
Confidence 99999999999999999999999954 5677888888 467788888887654332 00000000 0000
Q ss_pred CCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 579 SDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 579 ~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. ++.++.|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 226 -------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l--~Vvd~~g~~~Giit~ 276 (296)
T 3ddj_A 226 -------GKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSL--LILNKDNTIRGIITE 276 (296)
T ss_dssp -------TCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEH
T ss_pred -------CcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEE--EEECCCCeEEEEEcH
Confidence 013556676 88899999999999999999998887 999999999999999
No 6
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.60 E-value=1.1e-16 Score=165.28 Aligned_cols=188 Identities=13% Similarity=0.117 Sum_probs=147.7
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccc-ccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSG-IYNVY 498 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~-~~~~~ 498 (704)
..+|+|+|++++.++.+++++.++.+.|.++ +++.+||+|++ ++++|+++.+|++...... ....+
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~~~~ 149 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTK-NVGGAPIVNDE------------NQLISLITERDVIRALLDKIDENEV 149 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHT-TCSEEEEECTT------------CBEEEEEEHHHHHHHHGGGSCTTCB
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhC-CCCEEEEEcCC------------CEEEEEEEHHHHHHHHhhcCCCCCC
Confidence 4579999999999999999999999999998 89999999877 7899999999997543322 23458
Q ss_pred cccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCCCC
Q psy6631 499 VEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVSAS 578 (704)
Q Consensus 499 V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~~~ 578 (704)
++++|++++.++.+++++.++.+.|.+ .+...+||+++++.+|.++..+...........+-.. .. .
T Consensus 150 v~~~m~~~~~~v~~~~~l~~~~~~~~~-~~~~~~~Vv~~~~~~Givt~~dl~~~~~~~~~~~~~~------~~--~---- 216 (280)
T 3kh5_A 150 IDDYITRDVIVATPGERLKDVARTMVR-NGFRRLPVVSEGRLVGIITSTDFIKLLGSDWAFNHMQ------TG--N---- 216 (280)
T ss_dssp SGGGCBCSCCCBCTTCBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHHHHTSHHHHHHHH------SC--C----
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHH-cCCCEEEEEECCEEEEEEEHHHHHHHHhhhhhhhhhc------cc--c----
Confidence 999999999999999999999999954 5667788887778899999988765443221111000 00 0
Q ss_pred CCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 579 SDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 579 ~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..... ..+..++|+ ++.++.|++++.++...|...+++++ ||+|++|+++|+||+
T Consensus 217 ~~~~~--~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l--~Vvd~~g~~~Givt~ 272 (280)
T 3kh5_A 217 VREIT--NVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGAL--PVVDENLRIKGIITE 272 (280)
T ss_dssp THHHH--HCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEE--EEECTTCBEEEEEEH
T ss_pred hhhhh--CCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEE--EEECCCCeEEEEEeH
Confidence 00000 013556676 88899999999999999999999887 999999999999987
No 7
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.57 E-value=1.6e-15 Score=157.06 Aligned_cols=201 Identities=13% Similarity=0.127 Sum_probs=142.4
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCC-CCc--ccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLL-PSS--SGIYN 496 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~-~~~--~~~~~ 496 (704)
+.+++++|.+++.++.+++++.++.+.|.++ +.+.+||+|++ ++++|+++..|++. ... .....
T Consensus 59 ~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-~~~~~~Vvd~~------------~~~~Giit~~di~~~~~~~~~~~~~ 125 (282)
T 2yzq_A 59 EEQLAMLVKRDVPVVKENDTLKKAAKLMLEY-DYRRVVVVDSK------------GKPVGILTVGDIIRRYFAKSEKYKG 125 (282)
T ss_dssp -----CCCBSCCCEEETTSBHHHHHHHHHHH-TCSEEEEECTT------------SCEEEEEEHHHHHHHTTTTCSGGGG
T ss_pred cCCHHHHcCCCCcEECCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CEEEEEEEHHHHHHHHHhccCCccc
Confidence 5689999999999999999999999999998 78999999977 78999999999976 433 23346
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc---CCCccccc--ccCchhh-c
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ---RRPSRFEV--TPAPDLL-R 569 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~---~~~sr~~v--~~~~~~l-~ 569 (704)
.+++++|++++.++.+++++.|+.+.|. .++...+||+|+ ++.+|.++..++.... ....+.++ .+....+ .
T Consensus 126 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~-~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (282)
T 2yzq_A 126 VEIEPYYQRYVSIVWEGTPLKAALKALL-LSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWILE 204 (282)
T ss_dssp CBSTTTSBSCCCCEETTSBHHHHHHHHH-TCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC------------------
T ss_pred CcHHHHhCCCCEEECCCCCHHHHHHHHH-HcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhcc
Confidence 7899999999999999999999999995 566778899874 6678888888765221 00000000 0000000 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+... ...........+..++|+ ++.+++|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 205 ~~~~~~-~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~~~lvGiit~ 270 (282)
T 2yzq_A 205 SHPTLL-FEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQL--PVIRGEGDLIGLIRD 270 (282)
T ss_dssp ---------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEE--EEEETTTEEEEEEEH
T ss_pred cchHHH-HhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCccee--EEECCCCCEEEEEeH
Confidence 000000 000000001125678888 89999999999999999999999987 999999999999997
No 8
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.56 E-value=3.3e-15 Score=154.62 Aligned_cols=172 Identities=17% Similarity=0.129 Sum_probs=123.8
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
|+|+|+|++++.++.++++++++.+.|.++ +++.+||+|++ ++++|+++..|++... .+.+|+
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~pV~d~~------------~~~~Giv~~~dl~~~~----~~~~v~ 63 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKY-KVRSFPVVNKE------------GKLVGIISVKRILVNP----DEEQLA 63 (282)
T ss_dssp CBHHHHSEESCCCEESSCC-------------CCEEEEECTT------------CCEEEEEESSCC--------------
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHc-CCCeEEEEcCC------------CcEEEEEEHHHHHhhh----ccCCHH
Confidence 579999999999999999999999999988 79999999866 7899999999997543 256899
Q ss_pred cccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh-hcCCCcccccccCchhhcCCCCCCCCC
Q psy6631 501 DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE-RQRRPSRFEVTPAPDLLRGNPHGVSAS 578 (704)
Q Consensus 501 dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~-~~~~~sr~~v~~~~~~l~~~~~~~~~~ 578 (704)
++|.+++.++.+++++.|+++.|.+ .+...+||+|+ ++.+|.++..+... ...... ...
T Consensus 64 ~~m~~~~~~v~~~~~l~~a~~~m~~-~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~---------~~~--------- 124 (282)
T 2yzq_A 64 MLVKRDVPVVKENDTLKKAAKLMLE-YDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSE---------KYK--------- 124 (282)
T ss_dssp CCCBSCCCEEETTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCS---------GGG---------
T ss_pred HHcCCCCcEECCCCcHHHHHHHHHH-cCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccC---------Ccc---------
Confidence 9999999999999999999999964 55667888876 56788888887654 332110 000
Q ss_pred CCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 579 SDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 579 ~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. +++.+.+++++.++...|...+++++ ||+|++|+++|++++
T Consensus 125 -------~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l--~Vvd~~~~~~Giit~ 175 (282)
T 2yzq_A 125 -------GVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMAL--PVVDSEGNLVGIVDE 175 (282)
T ss_dssp -------GCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEE--EEECTTSCEEEEEEG
T ss_pred -------cCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEE--EEEcCCCeEEEEEEH
Confidence 013456676 78899999999999999998888876 999999999999997
No 9
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.53 E-value=9.1e-15 Score=140.99 Aligned_cols=118 Identities=13% Similarity=0.122 Sum_probs=101.4
Q ss_pred ccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc-----
Q psy6631 418 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS----- 492 (704)
Q Consensus 418 l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~----- 492 (704)
+.+++|+|+|+++++++.+++|+.++.+.|.++ +++++||+|++ ++++|+|+..|++.....
T Consensus 15 l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~-~~~~~pVvd~~------------g~lvGiit~~Dll~~~~~~~~~~ 81 (170)
T 4esy_A 15 IRQVPIRDILTSPVVTVREDDTLDAVAKTMLEH-QIGCAPVVDQN------------GHLVGIITESDFLRGSIPFWIYE 81 (170)
T ss_dssp HHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHT-TCSEEEEECTT------------SCEEEEEEGGGGGGGTCCTTHHH
T ss_pred HcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHc-CCeEEEEEcCC------------ccEEEEEEHHHHHHHHhhccccc
Confidence 457889999999999999999999999999998 89999999987 899999999999754221
Q ss_pred -------------------cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHH
Q psy6631 493 -------------------GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRR 549 (704)
Q Consensus 493 -------------------~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~ 549 (704)
.....+|+++|++++.++++++++.+++++|. ..++..+||+|+++.+|.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~-~~~~~~lpVvd~g~lvGivt~~Di 156 (170)
T 4esy_A 82 ASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMR-RHGIHRIPVVQDGVPVGIVTRRDL 156 (170)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHH-HTTCSEEEEEETTEEEEEEEHHHH
T ss_pred hhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHH-HcCCcEEEEEECCEEEEEEEHHHH
Confidence 12346899999999999999999999999995 577888999988777777777664
No 10
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.52 E-value=4.7e-14 Score=163.86 Aligned_cols=194 Identities=13% Similarity=0.009 Sum_probs=129.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-HHHHHhhhc-chhHHHHHHHHHHHHHH---hhhhhccccCCCC
Q psy6631 162 DPQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRN-KKMNAFLQK-NRFLYPGIVVLLATSVS---FPLGLGKYMAGDL 236 (704)
Q Consensus 162 ~~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~-~~~~~~l~~-~~~l~p~l~gllvg~l~---fP~~~G~~~~g~l 236 (704)
....+.+.+++|++.|+++.+|.+.+.+...+++.. ......... .+++.|++++++.+.+. .|..-|.+
T Consensus 7 ~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsG----- 81 (632)
T 3org_A 7 LLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSG----- 81 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-----
Confidence 345677788999999999999999988776543211 000001111 12345666666666543 36655554
Q ss_pred CcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHHHHHHHhhCCccccccchhhHHHHHHHHHH
Q psy6631 237 NTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYIFSIIASTIPVPSGSFIPVFKIGAAFGRMI 316 (704)
Q Consensus 237 ~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~~t~lt~g~g~pGGiF~Psl~IGA~~G~~~ 316 (704)
..++...+++. . ..+. ....+ -.++.|++.+.+|.|+|.+.|-=-|+.-+||++|..+
T Consensus 82 --Ip~v~~~l~g~---------~-~~~~------~~~~~----~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~ 139 (632)
T 3org_A 82 --LPQMKSILSGF---------Y-DKMR------SALEL----RVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQF 139 (632)
T ss_dssp --HHHHHHHTTTT---------H-HHHG------GGGSH----HHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhCc---------c-cccc------ccccH----HHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHH
Confidence 45555444331 0 0000 00111 2357899999999999999999999999999999987
Q ss_pred HH--HHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHHHhCC-c--hhHHHHHHHHHHHHHHHhh
Q psy6631 317 GE--IIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFEMTGQ-I--THIIPVMIAVLISNAVAAL 390 (704)
Q Consensus 317 G~--~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~ElTG~-~--~~~lPimia~~is~~va~~ 390 (704)
+. .+...+.+ ..+--.+...|+||=+|++-+ |+..++..+|.... + ..++|.++++++|..+.+.
T Consensus 140 ~~~~~f~~~~~~---------~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~ 210 (632)
T 3org_A 140 YRLGVFKELCTD---------RALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYEL 210 (632)
T ss_dssp TTSHHHHHHHHS---------HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC
T ss_pred hhhhhhccccCC---------HHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 77 55432211 112346788999998888888 89999999998764 2 4568999999999888775
Q ss_pred c
Q psy6631 391 L 391 (704)
Q Consensus 391 l 391 (704)
+
T Consensus 211 ~ 211 (632)
T 3org_A 211 L 211 (632)
T ss_dssp -
T ss_pred h
Confidence 4
No 11
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.49 E-value=4.1e-15 Score=155.51 Aligned_cols=180 Identities=11% Similarity=0.062 Sum_probs=144.3
Q ss_pred cccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc------
Q psy6631 419 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS------ 492 (704)
Q Consensus 419 ~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~------ 492 (704)
...+|+|+|++++.++.+++++.+|++.|.++ +.+.+||+| + +++|+++..|++.....
T Consensus 18 ~~~~V~dim~~~~~~v~~~~~v~~a~~~m~~~-~~~~~~V~d-~-------------~l~GivT~~Di~~~~~~~~~~~~ 82 (296)
T 3ddj_A 18 QGMNIETLMIKNPPILSKEDRLGSAFKKINEG-GIGRIIVAN-E-------------KIEGLLTTRDLLSTVESYCKDSC 82 (296)
T ss_dssp CCSSGGGTCEESCCEECTTSBHHHHHHHTTGG-GCCEEEEES-S-------------SEEEEEEHHHHHGGGTTCC---C
T ss_pred cccCHHHhccCCCcEECCCccHHHHHHHHHHC-CCceEEEEC-C-------------eEEEEEeHHHHHHHhcccccccc
Confidence 36789999999999999999999999999998 899999998 5 69999999999755321
Q ss_pred ------cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCc
Q psy6631 493 ------GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAP 565 (704)
Q Consensus 493 ------~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~ 565 (704)
.....+|+++|++++.++.+++++.|+++.|.+ .+...+||+|+ ++.+|.++..+.........
T Consensus 83 ~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~-~~~~~lpVvd~~~~lvGivt~~dl~~~~~~~~-------- 153 (296)
T 3ddj_A 83 SQGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVT-RNFGSLPVVDINDKPVGIVTEREFLLLYKDLD-------- 153 (296)
T ss_dssp CHHHHHHHHTSBGGGTSEESCCCEETTSCHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHGGGGGGSC--------
T ss_pred cchhhHHHhcccHHHhccCCCEEEcCCCCHHHHHHHHHH-cCCCEEEEEcCCCcEEEEEeHHHHHHhhhccc--------
Confidence 123578999999999999999999999999954 56778888865 56688888777544321000
Q ss_pred hhhcCCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH--HHHHH
Q psy6631 566 DLLRGNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR--IRMAF 642 (704)
Q Consensus 566 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr--~r~a~ 642 (704)
. ..+..++|. ++.++.|++++.++...|...+++.+ ||+|++|+++|++|+ +..++
T Consensus 154 -----------------~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~--~Vvd~~~~~~Givt~~dl~~~~ 212 (296)
T 3ddj_A 154 -----------------E--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRL--PVIDDDNKVVGIVTVVNAIKQL 212 (296)
T ss_dssp -----------------C--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEHHHHHHHH
T ss_pred -----------------c--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEE--EEEcCCCEEEEEEEHHHHHHHH
Confidence 0 013455665 77888999999999999998888887 999999999999998 44444
Q ss_pred H
Q psy6631 643 E 643 (704)
Q Consensus 643 e 643 (704)
.
T Consensus 213 ~ 213 (296)
T 3ddj_A 213 A 213 (296)
T ss_dssp H
T ss_pred H
Confidence 4
No 12
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.46 E-value=1.4e-14 Score=149.40 Aligned_cols=173 Identities=12% Similarity=0.128 Sum_probs=137.0
Q ss_pred ccc-cccccceEEecCCCCHHHHHHHHHhcCCccEEEeecC-ccccccCCCCcCCeeEEEeecCCCCCCCCcc-------
Q psy6631 422 YVE-DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SVAALLQPSLYDSIILIKKLPYLPDLLPSSS------- 492 (704)
Q Consensus 422 ~V~-diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~-~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~------- 492 (704)
+|. ++|+++++++.+++++.+|++.|.++ +.+.+||+|+ + ++++|+++.+|++.....
T Consensus 4 ~v~~~i~~~~~~~v~~~~sl~~a~~~m~~~-~~~~lpV~d~~~------------~~~~Givt~~di~~~~~~~~~~~~~ 70 (280)
T 3kh5_A 4 RVMKIAQNKKIVTVYPTTTIRKALMTMNEN-KYRRLPVVNAGN------------NKVVGIITSMDIVDFMGGGSKYNLI 70 (280)
T ss_dssp BGGGTSCCSCCCCBCTTSBHHHHHHHHHHH-CCCEEEEECTTT------------CBEEEEEEHHHHHHHTTTSGGGHHH
T ss_pred hHHHHhcCCCcEEECCCCcHHHHHHHHHhC-CCcEeeEEECCC------------CeEEEEEEHHHHHHHhcccchhhhh
Confidence 344 45778999999999999999999998 8999999986 4 789999999999743211
Q ss_pred ---------cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccc
Q psy6631 493 ---------GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVT 562 (704)
Q Consensus 493 ---------~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~ 562 (704)
...+.+|+++|++++.++.+++++.|+++.|. ..+...+||+|+ ++.+|.++..+........
T Consensus 71 ~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~-~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~------ 143 (280)
T 3kh5_A 71 REKHERNFLAAINEPVREIMEENVITLKENADIDEAIETFL-TKNVGGAPIVNDENQLISLITERDVIRALLDK------ 143 (280)
T ss_dssp HTTSTTCHHHHTTSBGGGTSBCSCCCEETTCBHHHHHHHHH-HTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG------
T ss_pred hhccccchhHHhhhhHHHhcCCCCEEECCCCCHHHHHHHHH-hCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc------
Confidence 11246899999999999999999999999995 466778888875 5668888888765432100
Q ss_pred cCchhhcCCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 563 PAPDLLRGNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 563 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.. . ..+..++|. ++..+.|++++.++...|...+++.+ ||+ ++|+++|++|+
T Consensus 144 -----~~----~-----------~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~--~Vv-~~~~~~Givt~ 196 (280)
T 3kh5_A 144 -----ID----E-----------NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRL--PVV-SEGRLVGIITS 196 (280)
T ss_dssp -----SC----T-----------TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEE--EEE-ETTEEEEEEEH
T ss_pred -----CC----C-----------CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEE--EEE-ECCEEEEEEEH
Confidence 00 0 013556675 78889999999999999998888887 999 78999999998
No 13
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.42 E-value=1.5e-14 Score=153.15 Aligned_cols=188 Identities=11% Similarity=0.048 Sum_probs=137.0
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc-----cccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS-----SGIY 495 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~-----~~~~ 495 (704)
+++.++|.++++++.+++++.++++.|.++ +.+.+||+|++. ..+..+++|+++.+|++.... ....
T Consensus 114 ~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~-~~~~lpVvd~~~-------~~~~~~l~Givt~~di~~~l~~~~~~~~~~ 185 (323)
T 3t4n_C 114 ERALGVDQLDTASIHPSRPLFEACLKMLES-RSGRIPLIDQDE-------ETHREIVVSVLTQYRILKFVALNCRETHFL 185 (323)
T ss_dssp HHHTTC----CCCBCTTSBHHHHHHHHHHH-TCSEEEEEEECT-------TTCCEEEEEEEEHHHHHHHHHHHCGGGGGC
T ss_pred HHHhCCCCCCceEeCCCCcHHHHHHHHHhC-CeeEEEEEecCC-------CCCccceEEEecHHHHHHHHHhcCCchhhh
Confidence 456777889999999999999999999998 899999998760 000114999999999974321 2334
Q ss_pred ccccccc---cccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCc-ccccccCchhhcC
Q psy6631 496 NVYVEDF---MVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPS-RFEVTPAPDLLRG 570 (704)
Q Consensus 496 ~~~V~dv---M~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~s-r~~v~~~~~~l~~ 570 (704)
..+|+++ |++++.++.+++++.|+.+.|. ..+...+||+|+ ++.+|.++..++........ ...-.+..+++..
T Consensus 186 ~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~-~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~ 264 (323)
T 3t4n_C 186 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLT-QGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSLSVGEALMR 264 (323)
T ss_dssp CSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHH-HHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHHHHTTSBHHHHGGG
T ss_pred hCcHHHcCCCCCCCcEEECCCCcHHHHHHHHH-HcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchhhhccCCHHHHHhh
Confidence 5689999 9999999999999999999995 466778899875 56788888888755432111 0001111122221
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.+ .-..+++++.|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 265 ~~------------------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l--~Vvd~~~~l~Giit~ 311 (323)
T 3t4n_C 265 RS------------------DDFEGVYTCTKNDKLSTIMDNIRKARVHRF--FVVDDVGRLVGVLTL 311 (323)
T ss_dssp SC------------------TTCCCCEEECTTCBHHHHHHHHHHSCCCEE--EEECTTSBEEEEEEH
T ss_pred cc------------------ccCCCCEEECCCCCHHHHHHHHHHhCCCEE--EEECCCCcEEEEEEH
Confidence 00 001257899999999999999999999887 999999999999998
No 14
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.39 E-value=5.1e-14 Score=149.59 Aligned_cols=180 Identities=11% Similarity=0.072 Sum_probs=134.3
Q ss_pred cccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecC-ccccccCCCCcCCeeEEEeecCCCCCCCCc--------cc
Q psy6631 423 VEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SVAALLQPSLYDSIILIKKLPYLPDLLPSS--------SG 493 (704)
Q Consensus 423 V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~-~~~~~~~p~~~~~~~LvG~Is~~dll~~~~--------~~ 493 (704)
++++|.+++.++.+++++.++++.|.++ +.+.+||+|+ + ++++|+|+..|++.... ..
T Consensus 120 ~~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~~------------~~~~Givt~~dl~~~~~~~~~~~~~~~ 186 (330)
T 2v8q_E 120 YLQDSFKPLVCISPNASLFDAVSSLIRN-KIHRLPVIDPES------------GNTLYILTHKRILKFLKLFITEFPKPE 186 (330)
T ss_dssp HSSSSCCCCCCBCTTSBHHHHHHHHHHH-TCSCEEEECTTT------------CCEEEEECHHHHHHHHHHHSCSSSCCG
T ss_pred HhhcccCCceEeCCCCCHHHHHHHHHHC-CCCeEEEEeCCC------------CcEEEEEcHHHHHHHHHHHhhccCchh
Confidence 5688999999999999999999999998 7899999987 5 78999999999874321 11
Q ss_pred ccccccccc--cc-cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccc-cccCchhh
Q psy6631 494 IYNVYVEDF--MV-RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFE-VTPAPDLL 568 (704)
Q Consensus 494 ~~~~~V~dv--M~-~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~-v~~~~~~l 568 (704)
....+++++ |+ +++.++.+++++.|+.+.|.+ .+...+||+|+ ++.+|.++..++........... -.+..+.+
T Consensus 187 ~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~-~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 187 FMSKSLEELQIGTYANIAMVRTTTPVYVALGIFVQ-HRVSALPVVDEKGRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHHHH-HCCSEEEEECTTSBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred hhcCCHHHhcccCcCCceEECCCCCHHHHHHHHHH-cCCCeEEEECCCCcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 123456665 65 789999999999999999954 56778899874 56678777776543321110000 00000111
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 569 RGNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+. ...|+ ++.++.|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 266 ~~-------------------~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l--~Vvd~~g~l~Giit~ 314 (330)
T 2v8q_E 266 QH-------------------RSHYFEGVLKCYLHETLEAIINRLVEAEVHRL--VVVDEHDVVKGIVSL 314 (330)
T ss_dssp GG-------------------CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred hc-------------------cccccCCCeEECCCCcHHHHHHHHHHCCCcEE--EEEcCCCcEEEEEeH
Confidence 10 11234 78899999999999999999999887 999999999999998
No 15
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.32 E-value=2.6e-12 Score=117.47 Aligned_cols=117 Identities=11% Similarity=0.089 Sum_probs=98.8
Q ss_pred ccccccccccc--eEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccccc
Q psy6631 420 NVYVEDFMVRD--VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNV 497 (704)
Q Consensus 420 ~~~V~diM~~~--v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~ 497 (704)
+++|+|+|+++ +.++.++++++++.+.|.++ +++.+||+|++ .++++|+|+.+|++..........
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~-----------~~~~vGivt~~dl~~~~~~~~~~~ 69 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIES-AHSRFPVISED-----------KDHIEGILMAKDLLPFMRSDAEAF 69 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHH-CCSEEEEESSS-----------TTCEEEEEEGGGGGGGGSTTCCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhC-CCCEEEEEcCC-----------CCcEEEEEEHHHHHHHHhccCCCC
Confidence 46899999954 99999999999999999998 89999999864 158999999999987654445678
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
+++++|++ +.++++++++.++++.|. ..+.+.+||+|+ ++.+|.++..++.
T Consensus 70 ~v~~~m~~-~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~~~Giit~~dll 121 (127)
T 3nqr_A 70 SMDKVLRT-AVVVPESKRVDRMLKEFR-SQRYHMAIVIDEFGGVSGLVTIEDIL 121 (127)
T ss_dssp CHHHHCBC-CCEEETTCBHHHHHHHHH-HTTCCEEEEECTTSCEEEEEEHHHHH
T ss_pred CHHHHcCC-CeEECCCCcHHHHHHHHH-hcCCeEEEEEeCCCCEEEEEEHHHHH
Confidence 89999965 789999999999999995 577888999975 6778888887754
No 16
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.32 E-value=3.2e-12 Score=121.45 Aligned_cols=117 Identities=9% Similarity=0.105 Sum_probs=99.2
Q ss_pred cccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 418 IYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 418 l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
+..++|+|+|++ ++.+++++++++++++.|.++ +++.+||+|++ +++++|+|+.+|++...... .
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~-~~~~~pVvd~~-----------~~~lvGivt~~dl~~~~~~~-~ 101 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDT-AHSRFPVIGED-----------KDEVLGILHAKDLLKYMFNP-E 101 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHH-CCSEEEEESSS-----------TTCEEEEEEGGGGGGGSSCG-G
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHC-CCCEEEEEcCC-----------CCcEEEEEEHHHHHHHHHcC-C
Confidence 346789999997 799999999999999999998 89999999875 13899999999998764433 5
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHH
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRR 549 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~ 549 (704)
..+|+++|++ +.++++++++.++++.|. ..+.+.+||+|+ ++.+|.++..++
T Consensus 102 ~~~v~~im~~-~~~v~~~~~l~~a~~~m~-~~~~~~~~Vvd~~g~~~Givt~~Di 154 (156)
T 3oi8_A 102 QFHLKSILRP-AVFVPEGKSLTALLKEFR-EQRNHMAIVIDEYGGTSGLVTFEDI 154 (156)
T ss_dssp GCCHHHHCBC-CCEEETTSBHHHHHHHHH-HTTCCEEEEECTTSSEEEEEEHHHH
T ss_pred cccHHHHcCC-CEEECCCCCHHHHHHHHH-hcCCeEEEEECCCCCEEEEEEHHHh
Confidence 7789999976 899999999999999995 577889999975 567888777764
No 17
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.32 E-value=1.3e-12 Score=119.41 Aligned_cols=117 Identities=11% Similarity=-0.027 Sum_probs=101.1
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccc-cc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYN-VY 498 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~-~~ 498 (704)
+++|+|+|.+++.++.++++++++.+.|.++ +.+.+||+|++ +++|+|+.+|++......... .+
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~-------------~~~Givt~~dl~~~~~~~~~~~~~ 69 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAAS-GCACAPVLDGE-------------RYLGMVHLSRLLEGRKGWPTVKEK 69 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHH-TCSEEEEEETT-------------EEEEEEEHHHHHTTCSSSCCTTCB
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHC-CCcEEEEEECC-------------EEEEEEEHHHHHHHHhhCCcccCc
Confidence 5889999999999999999999999999998 89999999854 899999999998765544333 78
Q ss_pred cccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 499 VEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 499 V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
++++|++++.++++++++.|+++.|. ..+.+.+||+|+ ++.+|.++..++..
T Consensus 70 v~~~m~~~~~~v~~~~~l~~~~~~~~-~~~~~~lpVvd~~g~~~Giit~~dll~ 122 (128)
T 3gby_A 70 LGEELLETVRSYRPGEQLFDNLISVA-AAKCSVVPLADEDGRYEGVVSRKRILG 122 (128)
T ss_dssp CCGGGCBCCCCBCTTSBGGGSHHHHH-HCSSSEEEEECTTCBEEEEEEHHHHHH
T ss_pred HHHHccCCCcEECCCCCHHHHHHHHH-hCCCcEEEEECCCCCEEEEEEHHHHHH
Confidence 99999999999999999999999995 467788999974 66788888887644
No 18
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.32 E-value=4.7e-12 Score=116.16 Aligned_cols=116 Identities=14% Similarity=0.062 Sum_probs=98.7
Q ss_pred ccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccccc
Q psy6631 420 NVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNV 497 (704)
Q Consensus 420 ~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~ 497 (704)
.++|+|+|+ +++.++.++++++++.+.|.++ +++.+||+|++ .++++|+|+.+|++.... ....
T Consensus 4 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~-----------~~~~~Givt~~dl~~~~~--~~~~ 69 (129)
T 3jtf_A 4 ERTVADIMVPRSRMDLLDISQPLPQLLATIIET-AHSRFPVYEDD-----------RDNIIGILLAKDLLRYML--EPAL 69 (129)
T ss_dssp CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHS-CCSEEEEESSS-----------TTCEEEEEEGGGGGGGGT--CTTS
T ss_pred CCCHHHhCccHHHeEEECCCCCHHHHHHHHHHc-CCCEEEEEcCC-----------CCcEEEEEEHHHHHhHhc--cCCc
Confidence 578999999 7789999999999999999998 89999999863 158999999999986543 2356
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
+++++|++ +.++.+++++.++++.|. ..+.+.+||+|+ ++.+|.++..++..
T Consensus 70 ~v~~~m~~-~~~v~~~~~l~~~~~~m~-~~~~~~~pVvd~~g~~~Giit~~Dil~ 122 (129)
T 3jtf_A 70 DIRSLVRP-AVFIPEVKRLNVLLREFR-ASRNHLAIVIDEHGGISGLVTMEDVLE 122 (129)
T ss_dssp CGGGGCBC-CCEEETTCBHHHHHHHHH-TSSCCEEEEECC-CCEEEEEEHHHHHH
T ss_pred CHHHHhCC-CeEeCCCCcHHHHHHHHH-hcCCeEEEEEeCCCCEEEEEEHHHHHH
Confidence 79999965 889999999999999995 577889999986 67788888887643
No 19
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.32 E-value=2.1e-13 Score=144.92 Aligned_cols=185 Identities=13% Similarity=0.079 Sum_probs=134.5
Q ss_pred ccccccce--EEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc-----ccccc
Q psy6631 424 EDFMVRDV--KYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS-----SGIYN 496 (704)
Q Consensus 424 ~diM~~~v--~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~-----~~~~~ 496 (704)
+++|.+++ .++.+++++.++++.|.++ +.+.+||+|++.. .+...++|+|+..|++.... .....
T Consensus 110 ~~im~~~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~~~-------~~~~~~~Givt~~dl~~~~~~~~~~~~~~~ 181 (334)
T 2qrd_G 110 RKIGAIPPETIYVHPMHSLMDACLAMSKS-RARRIPLIDVDGE-------TGSEMIVSVLTQYRILKFISMNCKETAMLR 181 (334)
T ss_dssp HHHTCSCSSCCCBCTTSBHHHHHHHHHHS-CCSEEEEEEEETT-------TTEEEEEEEEEHHHHHHHHHHHCGGGGGCC
T ss_pred HhhccCCCceeeeCCCCcHHHHHHHHHHC-CceEEEEEeCCCC-------cCccceEEEeeHHHHHHHHHhhccchhhhh
Confidence 35677766 8999999999999999998 7899999986500 01123999999999874321 11234
Q ss_pred ccccc---ccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCc-ccccccCchhhcCC
Q psy6631 497 VYVED---FMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPS-RFEVTPAPDLLRGN 571 (704)
Q Consensus 497 ~~V~d---vM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~s-r~~v~~~~~~l~~~ 571 (704)
.+|++ +|++++.++++++++.|+.+.|.+ .+...+||+|+ ++.+|.++..++........ +..-.+..+++...
T Consensus 182 ~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~-~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~m~~~ 260 (334)
T 2qrd_G 182 VPLNQMTIGTWSNLATASMETKVYDVIKMLAE-KNISAVPIVNSEGTLLNVYESVDVMHLIQDGDYSNLDLSVGEALLKR 260 (334)
T ss_dssp CBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHH-HTCSEEEEECTTCBEEEEEETHHHHHHHTTSCGGGGGSBHHHHHTTC
T ss_pred CcHHHhCCcccCCceEECCCCcHHHHHHHHHH-cCCcEEEEEcCCCcEEEEEEHHHHHHHhhccccccccCcHHHHHhcc
Confidence 67888 599999999999999999999954 55677888885 57789999888765432211 00001111121110
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+ ..++.++.|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 261 -----------------~~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~l--~Vvd~~g~l~Giit~ 306 (334)
T 2qrd_G 261 -----------------PAN-FDGVHTCRATDRLDGIFDAIKHSRVHRL--FVVDENLKLEGILSL 306 (334)
T ss_dssp -----------------CTT-CCCCCEECTTCBHHHHHHHHHHSCCCEE--EEECTTCBEEEEEEH
T ss_pred -----------------ccc-CCCCEEECCCCcHHHHHHHHHHcCCCEE--EEECCCCeEEEEEeH
Confidence 000 0367889999999999999999988887 999999999999998
No 20
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.31 E-value=2.1e-13 Score=144.88 Aligned_cols=185 Identities=14% Similarity=0.105 Sum_probs=136.4
Q ss_pred cccccccccc--ccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc---
Q psy6631 418 IYNVYVEDFM--VRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS--- 492 (704)
Q Consensus 418 l~~~~V~diM--~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~--- 492 (704)
+...+|+|+| ++++.++++++++.++++.|.++ +++.+||+|++ .++++|+++.+|++.....
T Consensus 32 l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~-~~~~~pV~d~~-----------~~~~vGivt~~Dll~~l~~~~~ 99 (330)
T 2v8q_E 32 MKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTN-GVRAAPLWDSK-----------KQSFVGMLTITDFINILHRYYK 99 (330)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHH-TCSEEEEEETT-----------TTEEEEEEEHHHHHHHHHHHHH
T ss_pred HHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHc-CCcEEEEEeCC-----------CCeEEEEEEHHHHHHHHHHHHh
Confidence 4567899999 88999999999999999999998 89999999865 1589999999998632100
Q ss_pred -------c-------ccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc--CCCceEEeehHHHhhhcC-C
Q psy6631 493 -------G-------IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE--SSGKFEQMEIKRREERQR-R 555 (704)
Q Consensus 493 -------~-------~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~--~~~~~~~i~~~~~~~~~~-~ 555 (704)
. ....+++++|++++.++.+++++.|+++.|.+ .+...+||+| +++.+|.++..++..... .
T Consensus 100 ~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~ 178 (330)
T 2v8q_E 100 SALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIR-NKIHRLPVIDPESGNTLYILTHKRILKFLKLF 178 (330)
T ss_dssp HHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHH-HTCSCEEEECTTTCCEEEEECHHHHHHHHHHH
T ss_pred ccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHH-CCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHH
Confidence 0 01123467899999999999999999999954 5566688887 466788888887654321 0
Q ss_pred CcccccccCchhhcCCCCCCCCCCCCCCCCCCCCCC--cc--cCccccCCCchhhhcccccccccCCCCcCcccCCCCCc
Q psy6631 556 PSRFEVTPAPDLLRGNPHGVSASSDNIPRTENLDGP--QF--CPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTV 631 (704)
Q Consensus 556 ~sr~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~--~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l 631 (704)
.... +..+.... ...+ +| .++..+.|++++.++...|...+++++ ||+|++|++
T Consensus 179 ~~~~---~~~~~~~~-----------------~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~--~Vvd~~~~l 236 (330)
T 2v8q_E 179 ITEF---PKPEFMSK-----------------SLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSAL--PVVDEKGRV 236 (330)
T ss_dssp SCSS---SCCGGGGS-----------------BHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEE--EEECTTSBE
T ss_pred hhcc---CchhhhcC-----------------CHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeE--EEECCCCcE
Confidence 0000 00001100 0111 12 467788999999999999988888877 999999999
Q ss_pred chHHHH
Q psy6631 632 TGAESR 637 (704)
Q Consensus 632 ~G~vtr 637 (704)
+|++++
T Consensus 237 ~Giit~ 242 (330)
T 2v8q_E 237 VDIYSK 242 (330)
T ss_dssp EEEEEG
T ss_pred EEEEEH
Confidence 999998
No 21
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.31 E-value=1.3e-12 Score=122.80 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=99.3
Q ss_pred ccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc--ccccc
Q psy6631 421 VYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS--SGIYN 496 (704)
Q Consensus 421 ~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~--~~~~~ 496 (704)
++|+|+|++ ++.++.+++++.++++.|.++ +.+.+||+|++ ++++|+|+..|++.... .....
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~~~ 94 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRK-NLGMTAICDDD------------MNIIGIFTDGDLRRVFDTGVDMRD 94 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHH-TSSEEEEECTT------------CBEEEEEEHHHHHHHHCSSSCCTT
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhC-CCcEEEEECCC------------CcEEEEecHHHHHHHHhcCCCccc
Confidence 689999999 999999999999999999998 89999999977 79999999999975422 23357
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHH
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRR 549 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~ 549 (704)
.+|+++|++++.++++++++.++++.|. ..+...+||+|+++.+|.++..++
T Consensus 95 ~~v~~~m~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~~~~Giit~~di 146 (149)
T 3k2v_A 95 ASIADVMTRGGIRIRPGTLAVDALNLMQ-SRHITCVLVADGDHLLGVVHMHDL 146 (149)
T ss_dssp CBHHHHSEESCCEECTTCBHHHHHHHHH-HHTCSEEEEEETTEEEEEEEHHHH
T ss_pred CcHHHHcCCCCeEECCCCCHHHHHHHHH-HcCCCEEEEecCCEEEEEEEHHHh
Confidence 8999999999999999999999999995 466778999987766777776664
No 22
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.30 E-value=4.6e-12 Score=117.38 Aligned_cols=117 Identities=13% Similarity=0.082 Sum_probs=98.5
Q ss_pred ccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc-ccccc
Q psy6631 420 NVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS-SGIYN 496 (704)
Q Consensus 420 ~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~-~~~~~ 496 (704)
+++|+|+|+ +++.++.++++++++++.|.++ +++.+||+|++ .++++|+|+.+|++.... .....
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~-~~~~~pVvd~~-----------~~~~vGivt~~dl~~~~~~~~~~~ 69 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDA-AHSRYPVIGES-----------HDDVLGVLLAKDLLPLILKADGDS 69 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHH-CCSEEEEESSS-----------TTCEEEEEEGGGGGGGGGSSSGGG
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhC-CCCEEEEEcCC-----------CCcEEEEEEHHHHHHHHHhccCCC
Confidence 468999999 6789999999999999999998 89999999864 148999999999986543 34457
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
.+|+++|++ +.++.+++++.++++.|. ..+.+.+||+|+ ++.+|.++..++.
T Consensus 70 ~~v~~~m~~-~~~v~~~~~l~~~~~~m~-~~~~~~~~Vvd~~g~lvGiit~~Dil 122 (136)
T 3lfr_A 70 DDVKKLLRP-ATFVPESKRLNVLLREFR-ANHNHMAIVIDEYGGVAGLVTIEDVL 122 (136)
T ss_dssp CCGGGTCBC-CCEEETTCBHHHHHHHHH-HHTCCEEEEECTTSCEEEEEEHHHHH
T ss_pred cCHHHHcCC-CeEECCCCcHHHHHHHHH-hcCCeEEEEEeCCCCEEEEEEHHHHH
Confidence 789999976 899999999999999995 466788999875 5678888777754
No 23
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.30 E-value=2.8e-12 Score=119.69 Aligned_cols=119 Identities=20% Similarity=0.229 Sum_probs=99.8
Q ss_pred cccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc------
Q psy6631 420 NVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS------ 491 (704)
Q Consensus 420 ~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~------ 491 (704)
.++|+|+|++ ++.++.+++++.++.+.|.++ +++.+||+|++ ++++|+|+..|++....
T Consensus 4 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~G~vt~~dl~~~~~~~~~~~ 70 (152)
T 4gqw_A 4 VYTVGEFMTKKEDLHVVKPTTTVDEALELLVEN-RITGFPVIDED------------WKLVGLVSDYDLLALDSGDSTWK 70 (152)
T ss_dssp CSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHT-TCSEEEEECTT------------CBEEEEEEHHHHTTCC----CCH
T ss_pred eEEhhhccCCCCCCeEECCCCcHHHHHHHHHHc-CCceEEEEeCC------------CeEEEEEEHHHHHHhhcccCccc
Confidence 5789999998 899999999999999999998 89999999977 79999999999975422
Q ss_pred ---------ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhh
Q psy6631 492 ---------SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREER 552 (704)
Q Consensus 492 ---------~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~ 552 (704)
......+|.++|++++.++.+++++.++++.|. ..+...+||+++ ++.+|.++..++...
T Consensus 71 ~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~-~~~~~~l~Vvd~~g~~~Giit~~dil~~ 140 (152)
T 4gqw_A 71 TFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILL-ETKYRRLPVVDSDGKLVGIITRGNVVRA 140 (152)
T ss_dssp HHHHHHTC-----CCBHHHHSEESCCCEESSSBHHHHHHHHH-HSSCCEEEEECTTSBEEEEEEHHHHHHH
T ss_pred chHHHHHHHHHhccccHHHhcCCCceEECCCCcHHHHHHHHH-HCCCCEEEEECCCCcEEEEEEHHHHHHH
Confidence 123457899999999999999999999999995 466778899984 677888888876543
No 24
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.30 E-value=1.2e-12 Score=134.94 Aligned_cols=128 Identities=23% Similarity=0.228 Sum_probs=103.0
Q ss_pred CCCCccccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCC-
Q psy6631 412 LPSSSGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPS- 490 (704)
Q Consensus 412 ~~~~~~l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~- 490 (704)
+++....++++|+|+|+++++++.+++++.++.++|.++ ++++|||||++ ++++++|+|++.|++...
T Consensus 4 ~~~~~~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~-~~~~~PVVd~~----------~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 4 SWSSANKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQT-KLKFFPFVDTP----------DTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp CCCCCCCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHC-CCSEEEEESCT----------TTCBEEEEEEHHHHHHHHH
T ss_pred CCCCcccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhc-CCCEEEEEecC----------CCCeEEEEEEHHHHHHHHH
Confidence 344456778999999999999999999999999999998 89999999875 336899999999986210
Q ss_pred -------c---c--------------------------------------------------------------------
Q psy6631 491 -------S---S-------------------------------------------------------------------- 492 (704)
Q Consensus 491 -------~---~-------------------------------------------------------------------- 492 (704)
. .
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 152 (250)
T 2d4z_A 73 RRISAYRRQPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGI 152 (250)
T ss_dssp HHHHTTSSSCCCCCCBCCC-------------------------------------------------------------
T ss_pred HhhhhhhhhhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccc
Confidence 0 0
Q ss_pred -----------------------------ccccccc--c-cccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCc
Q psy6631 493 -----------------------------GIYNVYV--E-DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGK 540 (704)
Q Consensus 493 -----------------------------~~~~~~V--~-dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~ 540 (704)
.....+| + .+|++.+.+|.+++++.++.++|. ..++..+||++.++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~-~lglr~l~V~~~GrL 231 (250)
T 2d4z_A 153 YQKKQKGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFS-LLGLDRAYVTSMGKL 231 (250)
T ss_dssp --------------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHH-HHTCSEEEEEETTEE
T ss_pred cccccccccccCcccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHH-HhCCeEEEEEECCEE
Confidence 0011233 2 479999999999999999999994 577788889988888
Q ss_pred eEEeehHHHhh
Q psy6631 541 FEQMEIKRREE 551 (704)
Q Consensus 541 ~~~i~~~~~~~ 551 (704)
+|.++++++.+
T Consensus 232 VGIVTrkDl~k 242 (250)
T 2d4z_A 232 VGVVALAEIQA 242 (250)
T ss_dssp EEEEEHHHHHH
T ss_pred EEEEEHHHHHH
Confidence 99998888754
No 25
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.30 E-value=1.2e-12 Score=118.08 Aligned_cols=116 Identities=11% Similarity=0.159 Sum_probs=98.8
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
++|+|+|++++.++.++++++++.+.|.++ +.+.+||+|++ ++++|+|+..|++...... ..+++
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~G~vt~~dl~~~~~~~--~~~v~ 65 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKH-NINHLPIVDEH------------GKLVGIITSWDIAKALAQN--KKTIE 65 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHH-TCSCEEEECTT------------SBEEEEECHHHHHHHHHTT--CCBGG
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHc-CCCeEEEECCC------------CCEEEEEEHHHHHHHHHhc--ccCHH
Confidence 369999999999999999999999999998 78999999977 7999999999997542222 23899
Q ss_pred cccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhh
Q psy6631 501 DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREER 552 (704)
Q Consensus 501 dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~ 552 (704)
++|.+++.++.+++++.++++.|. ..+...+||+|+ ++.+|.++..++...
T Consensus 66 ~~~~~~~~~v~~~~~l~~~~~~~~-~~~~~~l~Vvd~~g~~~Givt~~dl~~~ 117 (122)
T 3kpb_A 66 EIMTRNVITAHEDEPVDHVAIKMS-KYNISGVPVVDDYRRVVGIVTSEDISRL 117 (122)
T ss_dssp GTSBSSCCCEETTSBHHHHHHHHH-HHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred HHhcCCCeEECCCCCHHHHHHHHH-HhCCCeEEEECCCCCEEEEEeHHHHHHH
Confidence 999999999999999999999995 456778899887 677888888876543
No 26
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.30 E-value=1.8e-12 Score=121.58 Aligned_cols=120 Identities=17% Similarity=0.253 Sum_probs=101.1
Q ss_pred ccccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccc
Q psy6631 417 GIYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGI 494 (704)
Q Consensus 417 ~l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~ 494 (704)
.+..++|+|+|++ ++.++.++++++++++.|.++ +++.+||+|++ .++++|+|+.+|++.......
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~-----------~~~lvGivt~~dl~~~~~~~~ 86 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEE-GVTRYPVCRKN-----------KDDILGFVHIRDLYNQKINEN 86 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHS-CCSEEEEESSS-----------TTSEEEEEEHHHHHHHHHHHS
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHC-CCCEEEEEcCC-----------CCcEEEEEEHHHHHHHHhcCC
Confidence 3567899999998 999999999999999999998 89999999864 148999999999975432222
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
..+|+++| +++.++++++++.++++.|. ..+.+.+||+|+ ++.+|.++..++..
T Consensus 87 -~~~v~~~m-~~~~~v~~~~~l~~~~~~m~-~~~~~~l~Vvd~~g~~~Giit~~dil~ 141 (148)
T 3lv9_A 87 -KIELEEIL-RDIIYISENLTIDKALERIR-KEKLQLAIVVDEYGGTSGVVTIEDILE 141 (148)
T ss_dssp -CCCGGGTC-BCCEEEETTSBHHHHHHHHH-HHTCSEEEEECTTSSEEEEEEHHHHHH
T ss_pred -CccHHHhc-CCCeEECCCCCHHHHHHHHH-hcCCeEEEEEeCCCCEEEEEEHHHHHH
Confidence 67899999 88999999999999999995 467788999986 67788888887643
No 27
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.30 E-value=3.3e-12 Score=117.73 Aligned_cols=120 Identities=12% Similarity=0.115 Sum_probs=101.5
Q ss_pred ccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCC-CCCC-ccccc
Q psy6631 418 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPD-LLPS-SSGIY 495 (704)
Q Consensus 418 l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dl-l~~~-~~~~~ 495 (704)
+.+++|+|+|++++.++.++++++++.+.|.++ +.+.+||+|++ ++++|+|+..|+ .... .....
T Consensus 5 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~~ 71 (138)
T 2p9m_A 5 LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKY-KISSLPVIDDE------------NKVIGIVTTTDIGYNLIRDKYTL 71 (138)
T ss_dssp CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHH-TCCEEEEECTT------------CBEEEEEEHHHHHHHHTTTCCCS
T ss_pred cccCCHHHhhcCCceEECCCCcHHHHHHHHHHC-CCcEEEEECCC------------CeEEEEEEHHHHHHHHHhhcccC
Confidence 457899999999999999999999999999988 78999999877 789999999998 6432 23345
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCC-----Cceeeccc-CCCceEEeehHHHhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRS-----LRVFPLVE-SSGKFEQMEIKRREE 551 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~r-----l~Vvpvv~-~~~~~~~i~~~~~~~ 551 (704)
..+++++|.+++.++++++++.|+++.|. ..+ ...+||+| +++.+|.++..++..
T Consensus 72 ~~~v~~~m~~~~~~v~~~~~l~~~~~~~~-~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 132 (138)
T 2p9m_A 72 ETTIGDVMTKDVITIHEDASILEAIKKMD-ISGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132 (138)
T ss_dssp SCBHHHHSCSSCCCEETTSBHHHHHHHHT-CC-----CCCEEEEECTTSBEEEEEEHHHHHH
T ss_pred CcCHHHHhCCCcEEECCCCCHHHHHHHHH-hcCCccccccEEEEECCCCeEEEEEEHHHHHH
Confidence 67899999999999999999999999994 456 77899998 566788888877643
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.29 E-value=5.5e-12 Score=116.36 Aligned_cols=119 Identities=11% Similarity=0.114 Sum_probs=99.7
Q ss_pred ccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCC-CC-Cccccc
Q psy6631 418 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDL-LP-SSSGIY 495 (704)
Q Consensus 418 l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll-~~-~~~~~~ 495 (704)
+..++|+|+|++++.+++++++++++.+.|.++ +.+.+||+|++ ++++|+|+..|++ .. ......
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~~ 70 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEF-DVGSLVVINDD------------GNVVGFFTKSDIIRRVIVPGLPY 70 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHH-TCSEEEEECTT------------SCEEEEEEHHHHHHHTTTTCCCT
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CcEEEEEeHHHHHHHHHhcCCcc
Confidence 346889999999999999999999999999998 79999999876 7899999999995 22 222345
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRREE 551 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~~ 551 (704)
..+|.++|++++.++++++++.++++.|.+ .+.+.+ |++ +++.+|.++..++..
T Consensus 71 ~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~-~~~~~l-Vvd~~g~~~Giit~~dil~ 125 (138)
T 2yzi_A 71 DIPVERIMTRNLITANVNTPLGEVLRKMAE-HRIKHI-LIEEEGKIVGIFTLSDLLE 125 (138)
T ss_dssp TSBGGGTCBCSCCEEETTSBHHHHHHHHHH-HTCSEE-EEEETTEEEEEEEHHHHHH
T ss_pred cCCHHHHhhCCCeEECCCCcHHHHHHHHHh-cCCCEE-EECCCCCEEEEEEHHHHHH
Confidence 678999999999999999999999999964 456666 776 566788888877654
No 29
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.29 E-value=1.7e-12 Score=124.30 Aligned_cols=124 Identities=13% Similarity=0.132 Sum_probs=105.2
Q ss_pred cccccccccccccc---ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc
Q psy6631 416 SGIYNVYVEDFMVR---DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS 492 (704)
Q Consensus 416 ~~l~~~~V~diM~~---~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~ 492 (704)
..+..++|+|+|++ ++.++.++++++++++.|.++ +.+.+||+|++ ++++|+|+..|++.....
T Consensus 19 ~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 19 FQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAH-KIGAVVVTDAD------------GVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp CSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHH-TCSEEEEECTT------------SCEEEEEEHHHHHHHHHH
T ss_pred HhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHc-CCCEEEEEcCC------------CeEEEEEEHHHHHHHHHh
Confidence 45678999999995 799999999999999999998 89999999977 799999999999754221
Q ss_pred ---cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhc
Q psy6631 493 ---GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQ 553 (704)
Q Consensus 493 ---~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~ 553 (704)
.....+|+++|.+++.++++++++.|+++.|.+ .+...+||+|+++.+|.++..++....
T Consensus 86 ~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~-~~~~~lpVvd~g~~~Giit~~dil~~~ 148 (165)
T 3fhm_A 86 QGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTG-GRFRHVPVEENGRLAGIISIGDVVKAR 148 (165)
T ss_dssp HGGGGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHHHT
T ss_pred cCCccccCCHHHHhcCCCeEECCCCcHHHHHHHHHH-cCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 345689999999999999999999999999954 567788998887778888888765433
No 30
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.28 E-value=1.6e-12 Score=117.63 Aligned_cols=116 Identities=18% Similarity=0.112 Sum_probs=98.0
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc--cccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS--GIYNVY 498 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~--~~~~~~ 498 (704)
|+|+|+|++++.+++++++++++.+.|.++ +.+.+||+| + ++++|+|+..|++..... .....+
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd-~------------~~~~G~it~~dl~~~~~~~~~~~~~~ 66 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVEN-AKGSSVVVK-E------------GVRVGIVTTWDVLEAIAEGDDLAEVK 66 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHH-CCCEEEEEE-T------------TEEEEEEEHHHHHHHHHHTCCTTTSB
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHc-CCCEEEEEe-C------------CeeEEEEeHHHHHHHHhcCCcccccC
Confidence 579999999999999999999999999998 789999999 6 689999999998743221 224678
Q ss_pred cccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 499 VEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 499 V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
|+++|.+++.++.+++++.|+.+.|.+ .+...+||+|+++.+|.++..++..
T Consensus 67 v~~~m~~~~~~v~~~~~l~~~~~~~~~-~~~~~l~Vvd~~~~~Gvit~~dl~~ 118 (125)
T 1pbj_A 67 VWEVMERDLVTISPRATIKEAAEKMVK-NVVWRLLVEEDDEIIGVISATDILR 118 (125)
T ss_dssp HHHHCBCGGGEECTTSCHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred HHHHcCCCCeEECCCCCHHHHHHHHHh-cCCcEEEEEECCEEEEEEEHHHHHH
Confidence 999999999999999999999999954 5677888888766788888877644
No 31
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.28 E-value=1.7e-12 Score=123.68 Aligned_cols=118 Identities=17% Similarity=0.206 Sum_probs=100.1
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCC---------
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPS--------- 490 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~--------- 490 (704)
.++|+|+|++++.++.+++++.++++.|.++ +.+.+||+|++ ++++|+|+..|++...
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~-~~~~~pVvd~~------------~~lvGivt~~dl~~~~~~~~~~~~~ 70 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEAL-DIRHVPIVDAN------------KKLLGIVSQRDLLAAQESSLQRSAQ 70 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHH-TCSEEEEECTT------------CBEEEEEEHHHHHHHHHHHCC----
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CcEEEEEeHHHHHHHHHHhhccccc
Confidence 5789999999999999999999999999998 79999999976 7899999999996432
Q ss_pred -cccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 491 -SSGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 491 -~~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
.......+|.++|++++.++++++++.++++.|.+ .+...+||+|+++.+|.++..++..
T Consensus 71 ~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~-~~~~~lpVvd~g~lvGiit~~dil~ 131 (160)
T 2o16_A 71 GDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQK-HKIGCLPVVAKDVLVGIITDSDFVT 131 (160)
T ss_dssp -----CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHH-TTCSCEEEEETTEEEEEECHHHHHH
T ss_pred ccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHH-hCCCEEEEEECCEEEEEEEHHHHHH
Confidence 12245678999999999999999999999999954 5677788888877788888888654
No 32
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.28 E-value=3.9e-12 Score=118.08 Aligned_cols=116 Identities=9% Similarity=0.023 Sum_probs=97.8
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCe--eEEEeecCCCCCCCCc-ccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSI--ILIKKLPYLPDLLPSS-SGIYN 496 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~--~LvG~Is~~dll~~~~-~~~~~ 496 (704)
.++|+|+|++++.++.++++++++++.|.++ +.+.+||+|++ + +++|+|+..|++.... .....
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~~~Givt~~dl~~~~~~~~~~~ 70 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKN-RVGLAVLTARD------------NPKRPVAVVSERDILRAVAQRLDLD 70 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHH-TCSEEEEEETT------------EEEEEEEEEEHHHHHHHHHTTCCTT
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CcceeEEEEEHHHHHHHHhcCCCCC
Confidence 4789999999999999999999999999998 78999999987 7 9999999999975321 12346
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
.+++++|.+++.+++++ ++.++++.|.+ .+...+||+|+ ++.+|.++..++.
T Consensus 71 ~~v~~~m~~~~~~v~~~-~l~~a~~~m~~-~~~~~l~Vvd~~g~~~Giit~~dll 123 (141)
T 2rih_A 71 GPAMPIANSPITVLDTD-PVHVAAEKMRR-HNIRHVVVVNKNGELVGVLSIRDLC 123 (141)
T ss_dssp SBSGGGCBCCCEEETTS-BHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHH
T ss_pred CCHHHHcCCCCeEEcCC-CHHHHHHHHHH-cCCeEEEEEcCCCcEEEEEEHHHHH
Confidence 78999999999999999 99999999954 56777888874 6677888777753
No 33
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.28 E-value=3.2e-12 Score=117.19 Aligned_cols=118 Identities=13% Similarity=0.188 Sum_probs=99.6
Q ss_pred cccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc-cccccc
Q psy6631 419 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS-SGIYNV 497 (704)
Q Consensus 419 ~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~-~~~~~~ 497 (704)
..++|+|+|.+++.++.++++++++.+.|.++ +.+.+||+| + ++++|+|+..|++.... ......
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd-~------------~~~~Givt~~dl~~~~~~~~~~~~ 67 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEK-NIGSVIVVD-G------------NKPVGIITERDIVKAIGKGKSLET 67 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHH-TCSEEEEEE-T------------TEEEEEEEHHHHHHHHHTTCCTTC
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhc-CCCEEEEEE-C------------CEEEEEEcHHHHHHHHhcCCCccc
Confidence 46789999999999999999999999999988 799999999 6 68999999999964322 223457
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
+|+++|++++.++++++++.++++.|.+ .+.+.+||+|+ ++.+|.++..++..
T Consensus 68 ~v~~~~~~~~~~v~~~~~l~~~~~~~~~-~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 68 KAEEFMTASLITIREDSPITGALALMRQ-FNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp BGGGTSEECCCCEETTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred CHHHHcCCCCEEECCCCCHHHHHHHHHH-cCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 8999999999999999999999999954 56778888874 66788888877643
No 34
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.28 E-value=2.1e-12 Score=118.39 Aligned_cols=119 Identities=12% Similarity=0.141 Sum_probs=99.3
Q ss_pred cccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCC-CCCcc--ccc
Q psy6631 419 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDL-LPSSS--GIY 495 (704)
Q Consensus 419 ~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll-~~~~~--~~~ 495 (704)
..++|+|+|++++.++.++++++++.+.|.++ +.+.+||+|++ ++++|+|+..|++ ..... ...
T Consensus 6 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~~~ 72 (133)
T 1y5h_A 6 TMTTARDIMNAGVTCVGEHETLTAAAQYMREH-DIGALPICGDD------------DRLHGMLTDRDIVIKGLAAGLDPN 72 (133)
T ss_dssp --CCHHHHSEETCCCEETTSBHHHHHHHHHHH-TCSEEEEECGG------------GBEEEEEEHHHHHHTTGGGTCCTT
T ss_pred hhcCHHHHhcCCceEeCCCCCHHHHHHHHHHh-CCCeEEEECCC------------CeEEEEEeHHHHHHHHHhcCCCcc
Confidence 35689999999999999999999999999988 78999999876 7999999999997 33222 224
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
..+++++|.+++.++++++++.|+++.|.+ .+...+||+++++.+|.++..++..
T Consensus 73 ~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~-~~~~~l~Vvd~g~~~Giit~~dil~ 127 (133)
T 1y5h_A 73 TATAGELARDSIYYVDANASIQEMLNVMEE-HQVRRVPVISEHRLVGIVTEADIAR 127 (133)
T ss_dssp TSBHHHHHTTCCCCEETTCCHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred ccCHHHHhcCCCEEECCCCCHHHHHHHHHH-cCCCEEEEEECCEEEEEEEHHHHHH
Confidence 678999999999999999999999999954 5677888888766788887777543
No 35
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=1.8e-12 Score=119.32 Aligned_cols=116 Identities=12% Similarity=0.031 Sum_probs=96.5
Q ss_pred cccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc--cccc
Q psy6631 421 VYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS--GIYN 496 (704)
Q Consensus 421 ~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~--~~~~ 496 (704)
++|+|+|+ +++.++.++++++++++.|.++ +++.+||++++ .++++|+|+.+|++..... ....
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~-~~~~~pVv~~~-----------~~~lvGivt~~dl~~~~~~~~~~~~ 69 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHS-PHGRIVLYRDS-----------LDDAISMLRVREAYRLMTEKKEFTK 69 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTC-SSSEEEEESSS-----------GGGEEEEEEHHHHHHHHTSSSCCCH
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHC-CCCeEEEEcCC-----------CCcEEEEEEHHHHHHHHhccCccch
Confidence 67999997 4789999999999999999998 89999999752 1689999999999754332 2345
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
.+|+++| +++.++.+++++.|+++.|. .++.+.+||+|+ ++.+|.++..++.
T Consensus 70 ~~v~~~m-~~~~~v~~~~~l~~~~~~m~-~~~~~~~~Vvd~~g~lvGiit~~Dil 122 (130)
T 3hf7_A 70 EIMLRAA-DEIYFVPEGTPLSTQLVKFQ-RNKKKVGLVVDEYGDIQGLVTVEDIL 122 (130)
T ss_dssp HHHHHHS-BCCCEEETTCBHHHHHHHHH-HHCCCEEEEECTTSCEEEEEEHHHHH
T ss_pred hhHHHhc-cCCeEeCCCCcHHHHHHHHH-hcCCeEEEEEcCCCCEEEEeeHHHHH
Confidence 6899999 67899999999999999995 466778999875 6778888888764
No 36
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.27 E-value=3.5e-12 Score=119.58 Aligned_cols=120 Identities=11% Similarity=0.087 Sum_probs=100.7
Q ss_pred ccccccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc--
Q psy6631 416 SGIYNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS-- 491 (704)
Q Consensus 416 ~~l~~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~-- 491 (704)
..+..++|+|+|+ +++.++.+++++.++.+.|.++ +++.+||+|++ ++++|+|+..|++....
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~-~~~~~pVvd~~------------~~~~Givt~~dl~~~~~~~ 76 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKS-GYSAIPVLDPM------------YKLHGLISTAMILDGILGL 76 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHH-TCSEEEEECTT------------CBEEEEEEHHHHHHHTBCS
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHc-CCcEEEEECCC------------CCEEEEEEHHHHHHHHHhh
Confidence 4567899999999 5699999999999999999998 89999999977 79999999999974321
Q ss_pred -----ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHhh
Q psy6631 492 -----SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRREE 551 (704)
Q Consensus 492 -----~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~~ 551 (704)
......+|+++|++++.++++++++.++++.|.+. +. +||+| +++.+|.++..++..
T Consensus 77 ~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~-~~--l~Vvd~~g~~~Giit~~dil~ 139 (150)
T 3lqn_A 77 ERIEFERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDH-PF--ICAVNEDGYFEGILTRRAILK 139 (150)
T ss_dssp SSBCGGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHC-SE--EEEECTTCBEEEEEEHHHHHH
T ss_pred cccchhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhC-CE--EEEECCCCcEEEEEEHHHHHH
Confidence 23456899999999999999999999999999653 33 88888 466788888877644
No 37
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.26 E-value=5.6e-13 Score=141.00 Aligned_cols=188 Identities=12% Similarity=0.021 Sum_probs=135.2
Q ss_pred ccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCC------
Q psy6631 419 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPS------ 490 (704)
Q Consensus 419 ~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~------ 490 (704)
...+|.|+|.+ +++.+..++++.+|++.|.++ +++.+||+|++ .++++|+++..|+....
T Consensus 28 ~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~-~~~~~pV~d~~-----------~~~lvGilt~~Dl~~~l~~~~~~ 95 (323)
T 3t4n_C 28 NSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQN-SIVSAPLWDSK-----------TSRFAGLLTTTDFINVIQYYFSN 95 (323)
T ss_dssp HHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHT-TCSCEEEEETT-----------TTEEEEEECHHHHHHHHHHHHHC
T ss_pred HhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHc-CCceEEEEeCC-----------CCeEEEEEEHHHHHHHHHHHHcC
Confidence 45779999975 577899999999999999998 89999999865 14899999988886321
Q ss_pred -c-----cccccc------ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCC------ceEEeehHHHhhh
Q psy6631 491 -S-----SGIYNV------YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSG------KFEQMEIKRREER 552 (704)
Q Consensus 491 -~-----~~~~~~------~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~------~~~~i~~~~~~~~ 552 (704)
. ...... .+.++|.+++.++.+++++.|+++.|.+ ++...+||+++++ .+|.++..+....
T Consensus 96 ~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~-~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~ 174 (323)
T 3t4n_C 96 PDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLE-SRSGRIPLIDQDEETHREIVVSVLTQYRILKF 174 (323)
T ss_dssp GGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHH-HTCSEEEEEEECTTTCCEEEEEEEEHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHh-CCeeEEEEEecCCCCCccceEEEecHHHHHHH
Confidence 0 000112 3345668999999999999999999954 5666888887643 6888888887543
Q ss_pred cCCCcccccccCchhhcCCCCCCCCCCCCCCCCCCCCCCc---cc-CccccCCCchhhhcccccccccCCCCcCcccCCC
Q psy6631 553 QRRPSRFEVTPAPDLLRGNPHGVSASSDNIPRTENLDGPQ---FC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPY 628 (704)
Q Consensus 553 ~~~~sr~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~ 628 (704)
.....+. .+... .+..++ |+ ++.++.|++++.++...|...+++.+ ||||++
T Consensus 175 l~~~~~~-----~~~~~-----------------~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~--pVvd~~ 230 (323)
T 3t4n_C 175 VALNCRE-----THFLK-----------------IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSV--PIIDEN 230 (323)
T ss_dssp HHHHCGG-----GGGCC-----------------SBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEE--EEECTT
T ss_pred HHhcCCc-----hhhhh-----------------CcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEE--EEECCC
Confidence 2110000 00000 123444 64 78899999999999999998888887 999999
Q ss_pred CCcchHHHH--HHHHHH
Q psy6631 629 TTVTGAESR--IRMAFE 643 (704)
Q Consensus 629 g~l~G~vtr--~r~a~e 643 (704)
|+++|++|+ +..++.
T Consensus 231 ~~~~Giit~~dl~~~~~ 247 (323)
T 3t4n_C 231 GYLINVYEAYDVLGLIK 247 (323)
T ss_dssp CBEEEEEETTHHHHHHH
T ss_pred CeEEEEEeHHHHHHHHh
Confidence 999999999 444443
No 38
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.26 E-value=1.4e-12 Score=119.72 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=96.7
Q ss_pred cccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 418 IYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 418 l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
+..++|+|+|++ ++.++.++++++++.+.|.++ +++.+||+|++ .++++|+|+.+|++........
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~-----------~~~~~Givt~~dl~~~~~~~~~ 70 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDT-PFSRPLVYSEQ-----------KDNIIGFVHRLELFKMQQSGSG 70 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTC-SCSCCEEESSS-----------TTCEEEECCHHHHHHHHHTTTT
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhC-CCCEEEEEeCC-----------CCcEEEEEEHHHHHHHHhcCCC
Confidence 456889999994 567899999999999999988 89999999853 1589999999999865444445
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
..+|+++|+ ++.++.+++++.++++.|. ..+.+.+||+|+ ++.+|.++..++.
T Consensus 71 ~~~v~~~m~-~~~~v~~~~~l~~~~~~m~-~~~~~~~~Vvd~~g~~vGivt~~dil 124 (130)
T 3i8n_A 71 QKQLGAVMR-PIQVVLNNTALPKVFDQMM-THRLQLALVVDEYGTVLGLVTLEDIF 124 (130)
T ss_dssp TSBHHHHSE-ECCEEETTSCHHHHHHHHH-HHTCCEEEEECTTSCEEEEEEHHHHH
T ss_pred cCCHHHHhc-CCcCcCCCCcHHHHHHHHH-HcCCeEEEEEcCCCCEEEEEEHHHHH
Confidence 778999995 6899999999999999995 467788999875 6778888888764
No 39
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.26 E-value=4.6e-12 Score=121.96 Aligned_cols=118 Identities=19% Similarity=0.256 Sum_probs=100.4
Q ss_pred cccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc------
Q psy6631 420 NVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS------ 491 (704)
Q Consensus 420 ~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~------ 491 (704)
.++|+|+|++ ++.++.+++++.++++.|.++ +++.+||+|++ ++++|+|+..|++....
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~-~~~~~pVvd~~------------~~~~Givt~~dl~~~~~~~~~~~ 69 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEK-KVTGLPVIDDN------------WTLVGVVSDYDLLALDSISGRSQ 69 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHH-TCSEEEEECTT------------CBEEEEEEHHHHTCC--------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHc-CCCeEEEECCC------------CeEEEEEEHHHHHhhhhhccccC
Confidence 4789999998 899999999999999999998 89999999977 79999999999975311
Q ss_pred -----------------------ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehH
Q psy6631 492 -----------------------SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIK 547 (704)
Q Consensus 492 -----------------------~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~ 547 (704)
......+|+++|++++.++++++++.++++.| ...+...+||++ +++.+|.++..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m-~~~~~~~lpVvd~~g~~vGiit~~ 148 (180)
T 3sl7_A 70 NDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLL-LETKFRRLPVVDADGKLIGILTRG 148 (180)
T ss_dssp -----------CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHH-TTSTTCEEEEECTTCBEEEEEEHH
T ss_pred CcccccccccchhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHH-HHcCCCEEEEECCCCeEEEEEEHH
Confidence 12345789999999999999999999999999 457788899998 46778888887
Q ss_pred HHhh
Q psy6631 548 RREE 551 (704)
Q Consensus 548 ~~~~ 551 (704)
++..
T Consensus 149 dil~ 152 (180)
T 3sl7_A 149 NVVR 152 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 40
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.25 E-value=5e-12 Score=120.22 Aligned_cols=120 Identities=14% Similarity=0.176 Sum_probs=100.8
Q ss_pred cccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCC--Ccccc
Q psy6631 417 GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLP--SSSGI 494 (704)
Q Consensus 417 ~l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~--~~~~~ 494 (704)
.+..++|+|+|++. +++.+++++.++.+.|.++ +.+.+||+|++ ++++|+|+..|++.. .....
T Consensus 13 ~l~~~~v~~im~~~-~~v~~~~~~~~a~~~m~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~ 78 (159)
T 3fv6_A 13 KLKKLQVKDFQSIP-VVIHENVSVYDAICTMFLE-DVGTLFVVDRD------------AVLVGVLSRKDLLRASIGQQEL 78 (159)
T ss_dssp HHTTCBGGGSCBCC-CEEETTSBHHHHHHHHHHH-TCSEEEEECTT------------SCEEEEEEHHHHHHHHTSCSCT
T ss_pred HHhhCCHHHHcCCC-EEECCCCcHHHHHHHHHHC-CCCEEEEEcCC------------CcEEEEEeHHHHHHHhhccCcc
Confidence 34578999999984 5999999999999999998 79999999977 789999999999753 23344
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccCC----CceEEeehHHHhh
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS----GKFEQMEIKRREE 551 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~----~~~~~i~~~~~~~ 551 (704)
...+|+++|++ ++.++++++++.++++.|. ..+...+||+|++ +.+|.++..++..
T Consensus 79 ~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~~~~~vGiit~~dil~ 140 (159)
T 3fv6_A 79 TSVPVHIIMTRMPNITVCRREDYVMDIAKHLI-EKQIDALPVIKDTDKGFEVIGRVTKTNMTK 140 (159)
T ss_dssp TTCBGGGTSEETTSCCCBCTTSBHHHHHHHHH-HHTCSEEEEEEECSSSEEEEEEEEHHHHHH
T ss_pred cCcCHHHHHcCCCCcEEECCCCCHHHHHHHHH-HcCCcEEEEEeCCCcceeEEEEEEHHHHHH
Confidence 66799999998 9999999999999999995 4667788998875 5678777777543
No 41
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.24 E-value=6e-12 Score=121.57 Aligned_cols=119 Identities=11% Similarity=0.173 Sum_probs=97.9
Q ss_pred ccccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 418 IYNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 418 l~~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
+..++|+|+|+ +++.++++++++.++++.|.++ +++.+||+|++ .++++|+|+..|++...... .
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~-~~~~~pVvd~~-----------~~~lvGivt~~dl~~~~~~~-~ 105 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQS-PHSRFPVCRNN-----------VDDMVGIISAKQLLSESIAG-E 105 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTC-CCSEEEEESSS-----------TTSEEEEEEHHHHHHHHHTT-C
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhC-CCCEEEEEeCC-----------CCeEEEEEEHHHHHHHHhhc-C
Confidence 45689999999 7899999999999999999998 89999999853 15799999999997543322 2
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
..+|+++| +++.++.+++++.++++.|. ..+.+.+||+|+ ++.+|.++..++..
T Consensus 106 ~~~v~~im-~~~~~v~~~~~l~~a~~~m~-~~~~~~~pVvd~~g~lvGiit~~Dil~ 160 (172)
T 3lhh_A 106 RLELVDLV-KNCNFVPNSLSGMELLEHFR-TTGSQMVFVVDEYGDLKGLVTLQDMMD 160 (172)
T ss_dssp CCCGGGGC-BCCEEEETTCCHHHHHHHHH-HHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred cccHHHHh-cCCeEeCCCCCHHHHHHHHH-HcCCeEEEEEeCCCCEEEEeeHHHHHH
Confidence 67899999 89999999999999999995 466788999986 67788888887643
No 42
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.24 E-value=3.2e-12 Score=121.17 Aligned_cols=122 Identities=16% Similarity=0.234 Sum_probs=100.1
Q ss_pred ccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccc----
Q psy6631 418 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSG---- 493 (704)
Q Consensus 418 l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~---- 493 (704)
...++|+|+|++++.++.+++++.++.+.|.++ +.+.+||+|++ ++++++|+|+..|++......
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~-~~~~~pVvd~~----------~~~~~~Givt~~dl~~~~~~~~~~~ 78 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTST-DVTEYPLVEST----------ESQILVGIVQRAQLVQALQAEPPSR 78 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTC-CCSEEEEESCT----------TTCBEEEEEEHHHHHHHHHC-----
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhC-CCCceeEEecC----------CCCEEEEEEEHHHHHHHHHhhcccc
Confidence 346889999999999999999999999999988 89999999861 127899999999986432111
Q ss_pred --ccccccccccccC------ceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 494 --IYNVYVEDFMVRD------VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 494 --~~~~~V~dvM~~~------v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
....++.++|.++ +.++++++++.|+++.|. ..+...+||+|+++.+|.++..++..
T Consensus 79 ~~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~-~~~~~~lpVvd~g~l~Giit~~dil~ 143 (164)
T 2pfi_A 79 APGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFK-LLNLQSLFVTSRGRAVGCVSWVEMKK 143 (164)
T ss_dssp --CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHH-HTTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred CCcccchhhhhhcccccccCCceEECCCCcHHHHHHHHH-HhCCCEEEEEECCEEEEEEEHHHHHH
Confidence 1346799999987 789999999999999995 46777899998777788888877643
No 43
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.24 E-value=6.2e-12 Score=115.72 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=98.6
Q ss_pred cccccccc---cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCC-CCc--ccc
Q psy6631 421 VYVEDFMV---RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLL-PSS--SGI 494 (704)
Q Consensus 421 ~~V~diM~---~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~-~~~--~~~ 494 (704)
++|+|+|+ +++.++++++++.++++.|.++ +.+.+||+| + ++++|+|+..|++. ... ...
T Consensus 6 ~~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd-~------------~~~~Givt~~dl~~~~~~~~~~~ 71 (135)
T 2rc3_A 6 KTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAAD-NIGALLVMK-D------------EKLVGILTERDFSRKSYLLDKPV 71 (135)
T ss_dssp CBHHHHHHHHCCCCCEECTTSBHHHHHHHHHHH-TCSEEEEEE-T------------TEEEEEEEHHHHHHHGGGSSSCG
T ss_pred eeHHHHHhcCCCCcEEECCCCcHHHHHHHHHhc-CCCEEEEEE-C------------CEEEEEEehHHHHHHHHHcCCCc
Confidence 38999999 8999999999999999999998 799999998 6 68999999999973 222 234
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
...+|+++|++++.++++++++.++++.|.+ .+...+||+|+++.+|.++..++..
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~-~~~~~lpVvd~g~~~Giit~~dll~ 127 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITE-MRVRHLPVLDDGKVIGLLSIGDLVK 127 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHH-hCCCEEEEEeCCEEEEEEEHHHHHH
Confidence 6789999999999999999999999999954 5667788888666788888877644
No 44
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.22 E-value=8.9e-12 Score=118.97 Aligned_cols=113 Identities=12% Similarity=0.129 Sum_probs=93.7
Q ss_pred ccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCC------ccc
Q psy6631 422 YVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPS------SSG 493 (704)
Q Consensus 422 ~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~------~~~ 493 (704)
+++++|+ +++.++.+++|+++|+++|.++ +++++||+|++ ++++|+|+.+|++... ...
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~-~~s~~pVvd~~------------~~lvGiit~~Di~~~~~~~~~~~~~ 82 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQM-TYTRVPVVTDE------------KQFVGTIGLRDIMAYQMEHDLSQEI 82 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTS-SSSEEEEECC-------------CBEEEEEEHHHHHHHHHHHTCCHHH
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHc-CCcEEEEEcCC------------CcEEEEEEecchhhhhhhccccccc
Confidence 5899998 4799999999999999999998 89999999877 7899999999986431 223
Q ss_pred ccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 494 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 494 ~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
....+|+++|++++.++++++++.++++.|.+ + +++||+|+ ++.+|.++..++.
T Consensus 83 ~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~-~--~~lpVVd~~g~l~GiiT~~Dil 137 (156)
T 3k6e_A 83 MADTDIVHMTKTDVAVVSPDFTITEVLHKLVD-E--SFLPVVDAEGIFQGIITRKSIL 137 (156)
T ss_dssp HTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTT-S--SEEEEECTTSBEEEEEEHHHHH
T ss_pred ccccCHHHhhcCCceecccccHHHHHHHHHHH-c--CCeEEEecCCEEEEEEEHHHHH
Confidence 35678999999999999999999999999943 2 35899876 5667777777754
No 45
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.22 E-value=3.7e-12 Score=123.33 Aligned_cols=122 Identities=11% Similarity=0.090 Sum_probs=99.8
Q ss_pred ccccccccccccccc----eEEe--cCCCCHHHHHHHHHhcCCccEEEee--cCccccccCCCCcCCeeEEEeecCCCCC
Q psy6631 416 SGIYNVYVEDFMVRD----VKYI--WNNMTYRDLKNLLKENRSLRVFPLV--ESSVAALLQPSLYDSIILIKKLPYLPDL 487 (704)
Q Consensus 416 ~~l~~~~V~diM~~~----v~~v--~~~~tl~ea~~~l~~~~~~~~~PVV--d~~~~~~~~p~~~~~~~LvG~Is~~dll 487 (704)
+.+..++|+|+|+++ +.++ .+++++.++.+.|.++ +++.+||+ |++ ++++|+|+..|++
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~-~~~~~pVv~~d~~------------~~lvGiit~~dl~ 72 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISET-TYSGFPVVVSRES------------QRLVGFVLRRDLI 72 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHC-CCSEEEEESCTTT------------CBEEEEEEHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhc-CCCceeEEEECCC------------CeEEEEEEHHHHH
Confidence 345678999999987 7888 9999999999999998 89999999 555 7999999999986
Q ss_pred CCCc--------------------------ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCce
Q psy6631 488 LPSS--------------------------SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKF 541 (704)
Q Consensus 488 ~~~~--------------------------~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~ 541 (704)
.... ......+|+++|++++.++++++++.++++.|.+ .+.+.+||+++++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~-~~~~~l~Vvd~g~~v 151 (185)
T 2j9l_A 73 ISIENARKKQDGVVSTSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRK-LGLRQCLVTHNGRLL 151 (185)
T ss_dssp HHHHHHHTSCSCCCTTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHH-HTCSEEEEEETTEEE
T ss_pred HHHHhhcccCCCccccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHh-CCCcEEEEEECCEEE
Confidence 4311 1134578999999999999999999999999954 567788888877778
Q ss_pred EEeehHHHhh
Q psy6631 542 EQMEIKRREE 551 (704)
Q Consensus 542 ~~i~~~~~~~ 551 (704)
|.++..++..
T Consensus 152 Giit~~dll~ 161 (185)
T 2j9l_A 152 GIITKKDVLK 161 (185)
T ss_dssp EEEEHHHHHH
T ss_pred EEEEHHHHHH
Confidence 8888877654
No 46
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.22 E-value=1.3e-11 Score=120.21 Aligned_cols=119 Identities=15% Similarity=0.089 Sum_probs=102.3
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc---ccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS---SGIYN 496 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~---~~~~~ 496 (704)
.++|+|+|++++.++.+++++++++++|.++ +.+.+||+|++ ++++|+|+.+|++.... .....
T Consensus 8 ~~~v~~im~~~~~~v~~~~~l~ea~~~~~~~-~~~~~pVvd~~------------g~~vGivt~~dl~~~~~~~~~~~~~ 74 (184)
T 1pvm_A 8 FMRVEKIMNSNFKTVNWNTTVFDAVKIMNEN-HLYGLVVKDDN------------GNDVGLLSERSIIKRFIPRNKKPDE 74 (184)
T ss_dssp CCBGGGTSBTTCCEEETTCBHHHHHHHHHHH-TCCEEEEECTT------------SCEEEEEEHHHHHHHTGGGCCCGGG
T ss_pred ccCHHHhcCCCCeEECCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CcEEEEEeHHHHHHHHhhcccCccc
Confidence 4789999999999999999999999999998 79999999876 78999999999975432 23456
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhh
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREER 552 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~ 552 (704)
.+++++|++++.++.+++++.++++.|.+ .+...+||+|+ ++.+|.++..++...
T Consensus 75 ~~v~~im~~~~~~v~~~~~l~~a~~~m~~-~~~~~lpVvd~~g~~~Givt~~dll~~ 130 (184)
T 1pvm_A 75 VPIRLVMRKPIPKVKSDYDVKDVAAYLSE-NGLERCAVVDDPGRVVGIVTLTDLSRY 130 (184)
T ss_dssp SBGGGTSBSSCCEEETTCBHHHHHHHHHH-HTCSEEEEECTTCCEEEEEEHHHHTTT
T ss_pred CCHHHHhCCCCcEECCCCCHHHHHHHHHH-cCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 78999999999999999999999999954 56778899887 677888888886543
No 47
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.22 E-value=5e-12 Score=119.43 Aligned_cols=118 Identities=16% Similarity=0.145 Sum_probs=98.9
Q ss_pred ccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEee-cCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 419 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLV-ESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 419 ~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVV-d~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
..++|+|+|++ ++.++.+++++.++.+.|.++ +++.+||+ |++ .++++|+|+..|++...... .
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVv~d~~-----------~~~lvGivt~~dl~~~~~~~-~ 84 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLEE-QYSRFPVTADND-----------KDKIIGYAYNYDIVRQARID-D 84 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHH-CCSEEEEEETTE-----------EEEEEEEEEHHHHHHHHHHH-T
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHhC-CCCEEEEEECCC-----------CCcEEEEEEHHHHHhHHhcC-C
Confidence 45789999996 899999999999999999998 89999999 542 27999999999997542222 2
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
..+|+++| +++.++.+++++.++++.|. ..+.+.+||+++ ++.+|.++..++..
T Consensus 85 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~-~~~~~~lpVvd~~g~~vGivt~~dil~ 139 (153)
T 3oco_A 85 KAKISTIM-RDIVSVPENMKVPDVMEEMS-AHRVPMAIVIDEYGGTSGIITDKDVYE 139 (153)
T ss_dssp TSBGGGTC-BCCEEEETTSBHHHHHHHHH-HTTCSCEEEECTTSCEEEEECHHHHHH
T ss_pred CCcHHHHh-CCCeEECCCCCHHHHHHHHH-HcCCcEEEEEeCCCCEEEEeeHHHHHH
Confidence 67899999 89999999999999999995 567788999986 67788888887643
No 48
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.21 E-value=1.4e-11 Score=116.12 Aligned_cols=119 Identities=10% Similarity=0.086 Sum_probs=98.3
Q ss_pred ccccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc--
Q psy6631 417 GIYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS-- 492 (704)
Q Consensus 417 ~l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~-- 492 (704)
.+..++|+|+|.+ ++.++.+++++.++.+.|.++ +.+.+||+|++ ++++|+|+..|++.....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~------------~~~~Givt~~dl~~~~~~~~ 73 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKT-GYSAIPVLDTS------------YKLHGLISMTMMMDAILGLE 73 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHS-SSSEEEEECTT------------CCEEEEEEHHHHHHHSBCSS
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHC-CceEEEEEcCC------------CCEEEEeeHHHHHHHHhccc
Confidence 3457899999997 899999999999999999998 89999999977 789999999999743321
Q ss_pred -----cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 493 -----GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 493 -----~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
.....+|+++|.+++.++++++++.++++.|.+. +. +||+++ ++.+|.++..++..
T Consensus 74 ~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~-~~--l~Vvd~~g~~~Giit~~dil~ 135 (157)
T 2emq_A 74 RIEFERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNH-PF--VCVENDDGYFAGIFTRREVLK 135 (157)
T ss_dssp SBCGGGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHS-SE--EEEECSSSSEEEEEEHHHHHH
T ss_pred ccchHHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhC-CE--EEEEcCCCeEEEEEEHHHHHH
Confidence 2356789999999999999999999999999653 33 888885 66788888877644
No 49
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.21 E-value=2.2e-12 Score=137.10 Aligned_cols=183 Identities=13% Similarity=0.041 Sum_probs=134.1
Q ss_pred cccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc----
Q psy6631 418 IYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS---- 491 (704)
Q Consensus 418 l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~---- 491 (704)
+...+|+|+|++ +++++++++|+.++++.|.++ +++.+||+|++ .++++|+|+.+|++....
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~-~~~~~pV~d~~-----------~~~~vGiv~~~Dl~~~~~~~~~ 86 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLN-NIVSAPLWDSE-----------ANKFAGLLTMADFVNVIKYYYQ 86 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHH-TCSCEEEEETT-----------TTEEEEEECHHHHHHHHHHHHH
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHc-CCeEEEEEeCC-----------CCeEEEEEEHHHHHHHHHHHhh
Confidence 345789999975 578899999999999999998 89999999864 158999999999874210
Q ss_pred ----cc----cccccc-------ccccccCc--eEEeCCCCHHHHHHHhHhcCCCceeecccCC--C----ceEEeehHH
Q psy6631 492 ----SG----IYNVYV-------EDFMVRDV--KYIWNNMTYRDLKNLLKENRSLRVFPLVESS--G----KFEQMEIKR 548 (704)
Q Consensus 492 ----~~----~~~~~V-------~dvM~~~v--~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~--~----~~~~i~~~~ 548 (704)
.. ....++ +++|.+++ .++.+++++.++.+.|.+ .+...+||+++. . .+|.++..+
T Consensus 87 ~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~~~~~~Givt~~d 165 (334)
T 2qrd_G 87 SSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSK-SRARRIPLIDVDGETGSEMIVSVLTQYR 165 (334)
T ss_dssp HCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHH-SCCSEEEEEEEETTTTEEEEEEEEEHHH
T ss_pred ccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHH-CCceEEEEEeCCCCcCccceEEEeeHHH
Confidence 00 002222 34577777 999999999999999954 567788888752 3 688888888
Q ss_pred HhhhcCCCcccccccCchhhcCCCCCCCCCCCCCCCCCCCCCC---ccc-CccccCCCchhhhcccccccccCCCCcCcc
Q psy6631 549 REERQRRPSRFEVTPAPDLLRGNPHGVSASSDNIPRTENLDGP---QFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPN 624 (704)
Q Consensus 549 ~~~~~~~~sr~~v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pv 624 (704)
+....... . ...+... .+..+ +|. ++..+.|++++.++...|...+++.+ ||
T Consensus 166 l~~~~~~~----~-~~~~~~~-----------------~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~--~V 221 (334)
T 2qrd_G 166 ILKFISMN----C-KETAMLR-----------------VPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAV--PI 221 (334)
T ss_dssp HHHHHHHH----C-GGGGGCC-----------------CBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEE--EE
T ss_pred HHHHHHhh----c-cchhhhh-----------------CcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEE--EE
Confidence 65432100 0 0000000 01223 465 78889999999999999988888876 99
Q ss_pred cCCCCCcchHHHH
Q psy6631 625 VTPYTTVTGAESR 637 (704)
Q Consensus 625 v~~~g~l~G~vtr 637 (704)
+|++|+++|++|+
T Consensus 222 vd~~~~~~Giit~ 234 (334)
T 2qrd_G 222 VNSEGTLLNVYES 234 (334)
T ss_dssp ECTTCBEEEEEET
T ss_pred EcCCCcEEEEEEH
Confidence 9999999999998
No 50
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.21 E-value=7.5e-12 Score=118.63 Aligned_cols=120 Identities=9% Similarity=0.137 Sum_probs=100.5
Q ss_pred ccccccccccccccceEEecCCCCHHHHHHHHHhcCCccE-EEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc---
Q psy6631 416 SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRV-FPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS--- 491 (704)
Q Consensus 416 ~~l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~-~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~--- 491 (704)
.....++|+|+|++++.++.+++++.++++.|.++ +.+. +||+|++ +++|+|+..|++....
T Consensus 11 ~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~-~~~~~~~Vvd~~-------------~~vGivt~~dl~~~~~~~~ 76 (157)
T 1o50_A 11 HHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILED-PVTRTVYVARDN-------------KLVGMIPVMHLLKVSGFHF 76 (157)
T ss_dssp TTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHS-TTCCEEEEEETT-------------EEEEEEEHHHHHHHHHHHH
T ss_pred hhhccccHhhcccCCCceECCCCCHHHHHHHHHhC-CCCccEEEEECC-------------EEEEEEEHHHHHHHHhhhH
Confidence 34557899999999999999999999999999998 7899 9999854 7999999999874310
Q ss_pred --------------ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHhh
Q psy6631 492 --------------SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRREE 551 (704)
Q Consensus 492 --------------~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~~ 551 (704)
......+|+++|++ ++++++++++.++++.|.+ .+.+.+||+| +++.+|.++..++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~-~~~~~lpVvd~~g~~vGiit~~dll~ 149 (157)
T 1o50_A 77 FGFIPKEELIRSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMID-NNIQEMPVVDEKGEIVGDLNSLEILL 149 (157)
T ss_dssp HCCCC-------CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred HhhhccHHHHHHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHH-CCCcEEEEEcCCCEEEEEEEHHHHHH
Confidence 23456789999999 9999999999999999954 5677889988 567788888877644
No 51
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.20 E-value=9.2e-12 Score=118.10 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=99.2
Q ss_pred cccccccccccc--ceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc---
Q psy6631 418 IYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS--- 492 (704)
Q Consensus 418 l~~~~V~diM~~--~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~--- 492 (704)
+..++|+|+|.+ ++.++.+++++.++++.|.++ +.+.+||+|++ ++++|+|+..|++.....
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~-~~~~~pVvd~~------------~~lvGivt~~dl~~~~~~~~~ 77 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKT-GYTAIPVLDPS------------YRLHGLIGTNMIMNSIFGLER 77 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHH-CCSEEEEECTT------------CBEEEEEEHHHHHHHHBCSSS
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhC-CCcEEEEECCC------------CCEEEEeEHHHHHHHhhhhcc
Confidence 446899999998 899999999999999999998 89999999977 799999999998743221
Q ss_pred ----cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 493 ----GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 493 ----~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
.....+|+++|.+++.++++++++.++++.|.+ .+ ++||+|+ ++.+|.++..++..
T Consensus 78 ~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~-~~--~lpVvd~~g~~vGiit~~dil~ 138 (159)
T 1yav_A 78 IEFEKLDQITVEEVMLTDIPRLHINDPIMKGFGMVIN-NG--FVCVENDEQVFEGIFTRRVVLK 138 (159)
T ss_dssp BCGGGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTT-CS--EEEEECTTCBEEEEEEHHHHHH
T ss_pred cchhhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHh-CC--EEEEEeCCCeEEEEEEHHHHHH
Confidence 135678999999999999999999999999953 33 3899884 67788888887654
No 52
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.18 E-value=8.5e-12 Score=117.83 Aligned_cols=116 Identities=11% Similarity=0.108 Sum_probs=95.6
Q ss_pred ccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc-----
Q psy6631 420 NVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS----- 492 (704)
Q Consensus 420 ~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~----- 492 (704)
..+|+|+|+ +++.++.++++++++.+.|.++ +++.+||+|++ ++++|+|+..|++.....
T Consensus 14 ~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~-~~~~~~Vvd~~------------~~~~Giit~~dl~~~~~~~~~~~ 80 (156)
T 3ctu_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQM-TYTRVPVVTDE------------KQFVGTIGLRDIMAYQMEHDLSQ 80 (156)
T ss_dssp HTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTC-SSSEEEEECC-------------CBEEEEEEHHHHHHHHHHHTCCH
T ss_pred HHHHHHHcCcccCceEECCCCCHHHHHHHHHHC-CCceEeEECCC------------CEEEEEEcHHHHHHHHHhccccc
Confidence 457999999 7899999999999999999988 89999999977 799999999999754321
Q ss_pred -cccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 493 -GIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 493 -~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
.....+|+++|++++.++++++++.++++.|.+.+ .+||+|+ ++.+|.++..++..
T Consensus 81 ~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~---~lpVvd~~g~~~Giit~~dil~ 138 (156)
T 3ctu_A 81 EIMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES---FLPVVDAEGIFQGIITRKSILK 138 (156)
T ss_dssp HHHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS---EEEEECTTSBEEEEEETTHHHH
T ss_pred cccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC---eEEEEcCCCeEEEEEEHHHHHH
Confidence 22367899999999999999999999999995432 6888884 56677777766543
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.17 E-value=8.3e-11 Score=117.88 Aligned_cols=113 Identities=9% Similarity=0.005 Sum_probs=99.5
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
.+++++|.+++.++.+++|++|++++|.++ +.+++||+|++ ++++|+|+..|+..... ..+|+
T Consensus 13 ~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~-~~~~~pVvd~~------------~~l~Givt~~dl~~~~~----~~~v~ 75 (213)
T 1vr9_A 13 MKVKKWVTQDFPMVEESATVRECLHRMRQY-QTNECIVKDRE------------GHFRGVVNKEDLLDLDL----DSSVF 75 (213)
T ss_dssp CBGGGGCBSCSCEEETTCBHHHHHHHHHHT-TSSEEEEECTT------------SBEEEEEEGGGGTTSCT----TSBSG
T ss_pred cCHHHhhcCCCeEECCCCcHHHHHHHHHHC-CCCEEEEEcCC------------CEEEEEEEHHHHHhhcC----CCcHH
Confidence 569999999999999999999999999998 89999999876 78999999999976543 46899
Q ss_pred cccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 501 DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 501 dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
++|++++.++++++++.|+++.|. ..+...+||+|+ ++.+|.++..++..
T Consensus 76 ~im~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~lvGiit~~Dil~ 126 (213)
T 1vr9_A 76 NKVSLPDFFVHEEDNITHALLLFL-EHQEPYLPVVDEEMRLKGAVSLHDFLE 126 (213)
T ss_dssp GGCBCTTCCEETTSBHHHHHHHHH-HCCCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred HHccCCCEEECCCCcHHHHHHHHH-HhCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 999999999999999999999995 467778999986 66788888887654
No 54
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.16 E-value=7.8e-11 Score=117.69 Aligned_cols=117 Identities=7% Similarity=0.077 Sum_probs=99.9
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcC--CccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENR--SLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNV 497 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~--~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~ 497 (704)
..+|+++|+++++++++++|++++++.++++. +...+||+|++ ++++|+|+.+|++... ...
T Consensus 53 ~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~------------~~lvGivt~~dll~~~----~~~ 116 (205)
T 3kxr_A 53 ENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA------------DKYLGTVRRYDIFKHE----PHE 116 (205)
T ss_dssp TTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT------------CBEEEEEEHHHHTTSC----TTS
T ss_pred cchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC------------CeEEEEEEHHHHHhCC----Ccc
Confidence 35799999999999999999999999999731 46889999977 7999999999997643 356
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ 553 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~ 553 (704)
+|+++|++++.++++++++.++++.| ...++..+||+|+ ++.+|.++..++....
T Consensus 117 ~v~~im~~~~~~v~~~~~l~~a~~~m-~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 117 PLISLLSEDSRALTANTTLLDAAEAI-EHSREIELPVIDDAGELIGRVTLRAATALV 172 (205)
T ss_dssp BGGGGCCSSCCCEETTSCHHHHHHHH-HTSSCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred hHHHHhcCCCeEECCCCCHHHHHHHH-HhcCCCEEEEEcCCCeEEEEEEHHHHHHHH
Confidence 89999999999999999999999999 4677889999986 6678888888765433
No 55
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.14 E-value=1.7e-11 Score=115.88 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=98.4
Q ss_pred cccccccc------cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc---
Q psy6631 421 VYVEDFMV------RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS--- 491 (704)
Q Consensus 421 ~~V~diM~------~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~--- 491 (704)
.+|+|+|+ +++.++.++++++++++.|.++ +++.+||+| + ++++|+|+..|++....
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~V~~-~------------~~~~Givt~~dl~~~~~~~~ 72 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEK-GIGALLVVD-G------------DDIAGIVTERDYARKVVLQE 72 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHH-TCSEEEEES-S------------SSEEEEEEHHHHHHHSGGGT
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHc-CCCEEEEee-C------------CEEEEEEEHHHHHHHHHhcc
Confidence 56999999 5679999999999999999998 799999965 4 68999999999975422
Q ss_pred ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhc
Q psy6631 492 SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQ 553 (704)
Q Consensus 492 ~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~ 553 (704)
......+|+++|++++.++++++++.|+++.|.+ .+...+||+|+++.+|.++..++....
T Consensus 73 ~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~-~~~~~lpVvd~g~~~Giit~~dil~~l 133 (157)
T 4fry_A 73 RSSKATRVEEIMTAKVRYVEPSQSTDECMALMTE-HRMRHLPVLDGGKLIGLISIGDLVKSV 133 (157)
T ss_dssp CCSSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHHHH
T ss_pred CCccccCHHHHcCCCCcEECCCCcHHHHHHHHHH-cCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 1235789999999999999999999999999954 566678888877778888888875543
No 56
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.13 E-value=6.4e-12 Score=129.61 Aligned_cols=151 Identities=21% Similarity=0.228 Sum_probs=99.0
Q ss_pred ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC---CCceEEeehHHHhhhcC----CCc-------
Q psy6631 492 SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES---SGKFEQMEIKRREERQR----RPS------- 557 (704)
Q Consensus 492 ~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~---~~~~~~i~~~~~~~~~~----~~s------- 557 (704)
......+|+|+|++++.++++++++.|++++|. ..+..-+||+|+ +..+|.+++.++..... ...
T Consensus 8 ~~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~-~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~ 86 (250)
T 2d4z_A 8 ANKYNIQVGDIMVRDVTSIASTSTYGDLLHVLR-QTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAA 86 (250)
T ss_dssp CCCSSCBTTSSSBSSCCCEETTCBHHHHHHHHH-HCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred cccCCCChHHhcCCCCeEECCCCCHHHHHHHHH-hcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhh
Confidence 345678999999999999999999999999995 466788999986 35799999999864221 111
Q ss_pred --------cccccc----CchhhcCCC----------C--C-----C----------------------------C---C
Q psy6631 558 --------RFEVTP----APDLLRGNP----------H--G-----V----------------------------S---A 577 (704)
Q Consensus 558 --------r~~v~~----~~~~l~~~~----------~--~-----~----------------------------~---~ 577 (704)
|+++.+ +++.+.-.. . . + + .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (250)
T 2d4z_A 87 EADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASR 166 (250)
T ss_dssp CBCCC---------------------------------------------------------------------------
T ss_pred cccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcc
Confidence 111111 011100000 0 0 0 0 0
Q ss_pred CCCCCCC----------CCCCC---CCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH--HHHH
Q psy6631 578 SSDNIPR----------TENLD---GPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR--IRMA 641 (704)
Q Consensus 578 ~~~~~~~----------~~~~~---~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr--~r~a 641 (704)
...++.+ ...+. ..+|. .+++++|++|++|++.+|..++++++ ||++ .|+|+||||| ++.|
T Consensus 167 ~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l--~V~~-~GrLVGIVTrkDl~ka 243 (250)
T 2d4z_A 167 FEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRA--YVTS-MGKLVGVVALAEIQAA 243 (250)
T ss_dssp CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEE--EEEE-TTEEEEEEEHHHHHHH
T ss_pred cccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEE--EEEE-CCEEEEEEEHHHHHHH
Confidence 0000000 00122 23455 99999999999999999999999998 8775 7999999999 9999
Q ss_pred HHHHh
Q psy6631 642 FEAIF 646 (704)
Q Consensus 642 ~e~~~ 646 (704)
+++.+
T Consensus 244 i~~~~ 248 (250)
T 2d4z_A 244 IEGSY 248 (250)
T ss_dssp HHC--
T ss_pred HHHHh
Confidence 98654
No 57
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.09 E-value=5e-11 Score=112.25 Aligned_cols=120 Identities=8% Similarity=0.095 Sum_probs=99.6
Q ss_pred ccccccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccc--
Q psy6631 416 SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSG-- 493 (704)
Q Consensus 416 ~~l~~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~-- 493 (704)
..+..++|+|+ +++.++.+++++.++.+.|.++ +.+.+||+|++ ++++|+|+..|++......
T Consensus 18 ~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~-~~~~~pVvd~~------------~~~vGivt~~dl~~~~~~~~~ 82 (152)
T 2uv4_A 18 KSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQH-RVSALPVVDEK------------GRVVDIYSKFDVINLAAEKTY 82 (152)
T ss_dssp SBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHH-CCSEEEEECTT------------SBEEEEEEHHHHHHHHHCSSC
T ss_pred hhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHc-CCceEeEECCC------------CcEEEEEeHHHHHHHhcchhh
Confidence 45667889998 7899999999999999999998 79999999977 7899999999997532211
Q ss_pred -ccccccccccc------cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 494 -IYNVYVEDFMV------RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 494 -~~~~~V~dvM~------~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
....+|.++|. ++++++.+++++.++++.|. ..+...+||+|+ ++.+|.++..++..
T Consensus 83 ~~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~~vGiit~~dil~ 147 (152)
T 2uv4_A 83 NNLDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLV-EAEVHRLVVVDENDVVKGIVSLSDILQ 147 (152)
T ss_dssp CCTTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHH-HHTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred hhhcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHH-HcCCeEEEEECCCCeEEEEEEHHHHHH
Confidence 34568999997 88999999999999999995 456778899986 66788888877643
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.08 E-value=9.4e-11 Score=133.36 Aligned_cols=141 Identities=7% Similarity=0.003 Sum_probs=109.4
Q ss_pred hHHHHHHHhcCCCCCCCCCCCccccccccccccccceEEecCC-CCHHHHHHHHHhcCCccEEEeec-CccccccCCCCc
Q psy6631 395 LYDSIILIKKLPYLPDLLPSSSGIYNVYVEDFMVRDVKYIWNN-MTYRDLKNLLKENRSLRVFPLVE-SSVAALLQPSLY 472 (704)
Q Consensus 395 iy~~~l~~r~~p~l~~~~~~~~~l~~~~V~diM~~~v~~v~~~-~tl~ea~~~l~~~~~~~~~PVVd-~~~~~~~~p~~~ 472 (704)
.++..+..+++..... .....+...+|+|+|+++++++.++ ++++|++++|.++ +++.+||+| ++
T Consensus 360 ~~~~~l~~rg~~~~~~--~~~~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~-~~~~lpVvd~~~---------- 426 (527)
T 3pc3_A 360 VSDNWMEARNFKEPVN--EHGHWWWSLAIAELELPAPPVILKSDATVGEAIALMKKH-RVDQLPVVDQDD---------- 426 (527)
T ss_dssp TSHHHHHHTTSSCCCC--TTCCTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHH-TCSEEEEECTTT----------
T ss_pred hcHHHHHhcCCccccc--cccccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHc-CCCeEEEEECCC----------
Confidence 3455666666543221 2233466789999999999999999 9999999999998 899999999 55
Q ss_pred CCeeEEEeecCCCCCCCCc--ccccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-----CCceEEee
Q psy6631 473 DSIILIKKLPYLPDLLPSS--SGIYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-----SGKFEQME 545 (704)
Q Consensus 473 ~~~~LvG~Is~~dll~~~~--~~~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-----~~~~~~i~ 545 (704)
++++|+|+.+|++.... ......+|+++|+++++++.+++++.|+++.|.+ .+ ++||+|+ ++.+|.++
T Consensus 427 --g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~-~~--~~pVVd~~~~~~g~lvGIVT 501 (527)
T 3pc3_A 427 --GSVLGVVGQETLITQIVSMNRQQSDPAIKALNKRVIRLNESEILGKLARVLEV-DP--SVLILGKNPAGKVELKALAT 501 (527)
T ss_dssp --CCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEETTCCEEETTSBHHHHHHHHTT-CS--EEEEEEECSSSCEEEEEEEE
T ss_pred --CEEEEEEEHHHHHHHHHhccCcCCCcHHHHhcCCCeEECCCCcHHHHHHHHhh-CC--EEEEEeCCcccCCeEEEEEE
Confidence 78999999999974322 2345678999999999999999999999999943 33 4688876 55677777
Q ss_pred hHHHhhhc
Q psy6631 546 IKRREERQ 553 (704)
Q Consensus 546 ~~~~~~~~ 553 (704)
..|+....
T Consensus 502 ~~Dll~~l 509 (527)
T 3pc3_A 502 KLDVTTFI 509 (527)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77765433
No 59
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.07 E-value=6.9e-11 Score=109.27 Aligned_cols=118 Identities=12% Similarity=0.132 Sum_probs=95.8
Q ss_pred cccccc---ccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc---c
Q psy6631 420 NVYVED---FMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS---G 493 (704)
Q Consensus 420 ~~~V~d---iM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~---~ 493 (704)
+.+++| +|.+++.++.+++++.++++.|.++ +.+.+||+|++ ++++|+|+..|++..... .
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~-~~~~~~Vvd~~------------~~~~Givt~~dl~~~~~~~~~~ 73 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQG-RVSSVPIIDEN------------GYLINVYEAYDVLGLIKGGIYN 73 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHH-TCSEEEEECTT------------CBEEEEEEHHHHHHHHHTC---
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHc-CcceeeEEcCC------------CcEEEEEcHHHHHHHhcccccc
Confidence 456888 8989999999999999999999998 79999999977 789999999999753222 2
Q ss_pred cccccccccccc------CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 494 IYNVYVEDFMVR------DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 494 ~~~~~V~dvM~~------~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
....+|.++|.+ ++.++++++++.++++.|. ..+...+||+|+ ++.+|.++..++..
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~-~~~~~~l~Vvd~~g~~~Giit~~dil~ 137 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIR-KARVHRFFVVDDVGRLVGVLTLSDILK 137 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHHHHHHHHH-HHTCSEEEEECTTSBEEEEEEHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHHHHHHHHH-HCCCCEEEEECCCCCEEEEEEHHHHHH
Confidence 346789999986 6899999999999999995 456778888875 66788888877643
No 60
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.03 E-value=9.1e-11 Score=119.57 Aligned_cols=116 Identities=11% Similarity=0.173 Sum_probs=93.5
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcc-------
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSS------- 492 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~------- 492 (704)
..+|+|+|++++.++.+++++.++++.|.++ +++.+||+|++ ++++|+|+..|++.....
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~-~~~~lpVvd~~------------~~l~Giit~~di~~~~~~~~~~~~~ 72 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDK-NLKSIPVADGN------------NHLLGMLSTSNITATYMDIWDSNIL 72 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHT-TCSEEEEECTT------------CBEEEEEEHHHHHHHHHCCCCTTHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHc-CCCEEEEEcCC------------CEEEEEEEHHHHHHHHHHhhhhhhh
Confidence 4679999999999999999999999999998 89999999987 789999998888632100
Q ss_pred --------------------------------------------------------------------------------
Q psy6631 493 -------------------------------------------------------------------------------- 492 (704)
Q Consensus 493 -------------------------------------------------------------------------------- 492 (704)
T Consensus 73 ~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~ 152 (245)
T 3l2b_A 73 AKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTP 152 (245)
T ss_dssp HHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCC
T ss_pred hhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCC
Confidence
Q ss_pred ----------------------------cccccccccccc-cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceE
Q psy6631 493 ----------------------------GIYNVYVEDFMV-RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFE 542 (704)
Q Consensus 493 ----------------------------~~~~~~V~dvM~-~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~ 542 (704)
.....+|+|+|+ +++.++++++++.|+.+.|. ..+...+||+|+ ++.+|
T Consensus 153 ~~~v~~~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~-~~~~~~~pVvd~~~~~~G 231 (245)
T 3l2b_A 153 SKEIIELAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMS-ETRYSNYPVIDENNKVVG 231 (245)
T ss_dssp CHHHHHHHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHH-HHCCSEEEEECTTCBEEE
T ss_pred CHHHHHHHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHH-hcCCceEEEEcCCCeEEE
Confidence 011357899999 99999999999999999995 466778899975 55566
Q ss_pred EeehHHH
Q psy6631 543 QMEIKRR 549 (704)
Q Consensus 543 ~i~~~~~ 549 (704)
.++.+++
T Consensus 232 iit~~dl 238 (245)
T 3l2b_A 232 SIARFHL 238 (245)
T ss_dssp EEECC--
T ss_pred EEEHHHh
Confidence 6655553
No 61
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.03 E-value=1.2e-10 Score=112.90 Aligned_cols=117 Identities=12% Similarity=0.042 Sum_probs=95.4
Q ss_pred cccccccccc--cceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccc
Q psy6631 419 YNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYN 496 (704)
Q Consensus 419 ~~~~V~diM~--~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~ 496 (704)
..++|+|+|+ +++.++.++++++++++.|.++ +++.+||+|++ .++++|+|+.+|++...... ..
T Consensus 34 ~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~-~~~~~pVvd~~-----------~~~lvGivt~~Dl~~~~~~~-~~ 100 (173)
T 3ocm_A 34 AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAA-PHSFFPVCRGS-----------LDEVVGIGRAKDLVADLITE-GR 100 (173)
T ss_dssp TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHS-SCSEEEEESSS-----------TTSEEEEEEHHHHHHHHHHH-SS
T ss_pred CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhC-CCCEEEEEeCC-----------CCCEEEEEEHHHHHHHHhcC-Cc
Confidence 4678999997 4689999999999999999998 89999999753 15899999999997543211 24
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
.+++ |.++++++.+++++.++++.|. ..+.+.+||+|+ ++.+|.++..++..
T Consensus 101 ~~v~--~~~~~~~v~~~~~l~~al~~m~-~~~~~~~~Vvde~g~lvGiIT~~Dil~ 153 (173)
T 3ocm_A 101 VRRN--RLRDPIIVHESIGILRLMDTLK-RSRGQLVLVADEFGAIEGLVTPIDVFE 153 (173)
T ss_dssp CCGG--GSBCCCEECGGGCHHHHHHHHH-HSTTCCEEEECTTCCEEEEECHHHHHH
T ss_pred chhH--hcCCCeEECCCCcHHHHHHHHH-HcCCeEEEEEeCCCCEEEEEeHHHHHH
Confidence 5677 5678999999999999999995 466788999875 67788888887653
No 62
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.98 E-value=4.6e-10 Score=117.73 Aligned_cols=116 Identities=11% Similarity=0.140 Sum_probs=99.5
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcC----CccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENR----SLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~----~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
..+|+++|+++++++.+++|++++.+.++++. +++.+||||++ ++++|+|+.+|++... .
T Consensus 136 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~------------~~lvGivt~~dll~~~----~ 199 (286)
T 2oux_A 136 DETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE------------NHLVGVISLRDLIVND----D 199 (286)
T ss_dssp TTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT------------CBEEEEEEHHHHTTSC----T
T ss_pred hHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC------------CeEEEEEEHHHHHcCC----C
Confidence 46799999999999999999999999999862 46789999977 7999999999997653 3
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhh
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREER 552 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~ 552 (704)
..+|+++|++++.++++++++.++++.|. ..+...+||+|+ ++.+|.++..++...
T Consensus 200 ~~~v~~im~~~~~~v~~~~~l~ea~~~m~-~~~~~~lpVVd~~g~lvGiIT~~Dil~~ 256 (286)
T 2oux_A 200 DTLIADILNERVISVHVGDDQEDVAQTIR-DYDFLAVPVTDYDDHLLGIVTVDDIIDV 256 (286)
T ss_dssp TSBHHHHSBSCCCCEETTSBHHHHHHHHH-HHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred CCcHHHHcCCCCeeecCCCCHHHHHHHHH-HcCCcEEEEEcCCCeEEEEEEHHHHHHH
Confidence 56899999999999999999999999995 466778899985 667888888876543
No 63
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.96 E-value=7.8e-10 Score=115.30 Aligned_cols=117 Identities=13% Similarity=0.186 Sum_probs=99.7
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcC----CccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENR----SLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~----~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
..+|+++|+++++++.++++++++++.++++. +...+||+|++ ++++|+|+.+|++... .
T Consensus 134 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~------------~~lvGivt~~dll~~~----~ 197 (278)
T 2yvy_A 134 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK------------GRLKGVLSLRDLIVAD----P 197 (278)
T ss_dssp TTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT------------CBEEEEEEHHHHHHSC----T
T ss_pred cchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC------------CCEEEEEEHHHHhcCC----C
Confidence 35699999999999999999999999999862 46889999977 7899999999987542 4
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ 553 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~ 553 (704)
..+|+++|++++.++++++++.++++.|. ..+...+||+|+ ++.+|.++..++....
T Consensus 198 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVvd~~g~lvGivT~~Dil~~i 255 (278)
T 2yvy_A 198 RTRVAEIMNPKVVYVRTDTDQEEVARLMA-DYDFTVLPVVDEEGRLVGIVTVDDVLDVL 255 (278)
T ss_dssp TCBSTTTSBSSCCCEETTSBHHHHHHHHH-HHTCSEEEEECTTSBEEEEEEHHHHHHHC
T ss_pred CCcHHHHhCCCCeEEeCCCCHHHHHHHHH-hcCCCEEEEEeCCCeEEEEEEHHHHHHHH
Confidence 57899999999999999999999999995 456778999985 6778888888876544
No 64
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.85 E-value=2.5e-09 Score=119.97 Aligned_cols=117 Identities=13% Similarity=0.186 Sum_probs=99.9
Q ss_pred ccccccccccceEEecCCCCHHHHHHHHHhcC----CccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCccccc
Q psy6631 420 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENR----SLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIY 495 (704)
Q Consensus 420 ~~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~----~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~ 495 (704)
..+|+++|+++++++++++|++++.+.++++. +...+||+|++ ++++|+|+.+|++... .
T Consensus 154 ~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~------------~~lvGiVt~~Dll~~~----~ 217 (473)
T 2zy9_A 154 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK------------GRLKGVLSLRDLIVAD----P 217 (473)
T ss_dssp TTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT------------SBEEEEEEHHHHHHSC----T
T ss_pred CCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC------------CcEEEEEEHHHHhcCC----C
Confidence 45799999999999999999999999999851 35789999977 7899999999997542 4
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ 553 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~ 553 (704)
+.+|+++|++++.++++++++.|+++.|. ..+...+||+|+ ++.+|.++..|.....
T Consensus 218 ~~~v~dim~~~~~~v~~~~~l~ea~~~m~-~~~~~~lpVVDe~g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 218 RTRVAEIMNPKVVYVRTDTDQEEVARLMA-DYDFTVLPVVDEEGRLVGIVTVDDVLDVL 275 (473)
T ss_dssp TSBGGGTSBSSCCCEESSSBHHHHHHHHH-HHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred CCcHHHHhCCCCeEEeCCCcHHHHHHHHH-hcCCcEEEEEcCCCEEEEEEehHhhHHHH
Confidence 56899999999999999999999999995 466778999985 6778999988875543
No 65
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.85 E-value=9.2e-11 Score=112.77 Aligned_cols=134 Identities=12% Similarity=0.122 Sum_probs=93.2
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
...+|+|+|++++.++++++++.|+++.|. .++...+||+|+ ++.+|.+++++...........+.. +.+.....
T Consensus 16 ~~~~V~diM~~~v~~v~~~~tl~~a~~~m~-~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~---~~~~~~~~ 91 (170)
T 4esy_A 16 RQVPIRDILTSPVVTVREDDTLDAVAKTML-EHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEAS---EILSRAIP 91 (170)
T ss_dssp HTSBGGGGCCSCCCCEETTSBHHHHHHHHH-HTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHH---HHHTTTSC
T ss_pred cCCCHHHhcCCCCcEECCcCcHHHHHHHHH-HcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchh---hhhhhccc
Confidence 357899999999999999999999999995 577788999875 5678888888764432211110000 00000000
Q ss_pred CCCC--CCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSA--SSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~--~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.... ..... ...+..++|+ ++.+++|++++.++.+.|...+++++ ||+| +|+++|+||+
T Consensus 92 ~~~~~~~~~~~--~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~l--pVvd-~g~lvGivt~ 153 (170)
T 4esy_A 92 APEVEHLFETG--RKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRI--PVVQ-DGVPVGIVTR 153 (170)
T ss_dssp HHHHHHHHHHH--TTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEE--EEEE-TTEEEEEEEH
T ss_pred hhhHHhhhccc--cccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEE--EEEE-CCEEEEEEEH
Confidence 0000 00000 0114667888 99999999999999999999999997 9998 5999999998
No 66
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.85 E-value=1.9e-09 Score=98.23 Aligned_cols=114 Identities=14% Similarity=0.099 Sum_probs=90.6
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHG 574 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~ 574 (704)
...+|+++|+++++++++++++.|+++.|.+ .+...+||+|+++.+|.+++.++.......
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~------------------ 63 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAA-SGCACAPVLDGERYLGMVHLSRLLEGRKGW------------------ 63 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHTTCSSS------------------
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHH-CCCcEEEEEECCEEEEEEEHHHHHHHHhhC------------------
Confidence 3578999999999999999999999999954 567788998886668888887754322100
Q ss_pred CCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 575 VSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. . . ..+..++|. ++..+.|++++.++.+.|...++.++ ||||++|+++|++|+
T Consensus 64 ~-~--~-----~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l--pVvd~~g~~~Giit~ 117 (128)
T 3gby_A 64 P-T--V-----KEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVV--PLADEDGRYEGVVSR 117 (128)
T ss_dssp C-C--T-----TCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEE--EEECTTCBEEEEEEH
T ss_pred C-c--c-----cCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEE--EEECCCCCEEEEEEH
Confidence 0 0 0 013566776 77889999999999999999888876 999999999999998
No 67
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.83 E-value=9.8e-10 Score=102.75 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=91.4
Q ss_pred cccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhc
Q psy6631 494 IYNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLR 569 (704)
Q Consensus 494 ~~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~ 569 (704)
....+|+|+|++ ++.++++++++.|+++.|. ..+...+||+++ ++.+|.++.+++........
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~-~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------------ 86 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILK-EEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN------------ 86 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHH-HSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS------------
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHH-HCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC------------
Confidence 356789999998 9999999999999999995 466778899987 56789888888654321000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. .+..++|.++.++.|++++.++.+.|...+.+.+ ||+|++|+++|+||+
T Consensus 87 ~----------------~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~l--~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 87 K----------------IELEEILRDIIYISENLTIDKALERIRKEKLQLA--IVVDEYGGTSGVVTI 136 (148)
T ss_dssp C----------------CCGGGTCBCCEEEETTSBHHHHHHHHHHHTCSEE--EEECTTSSEEEEEEH
T ss_pred C----------------ccHHHhcCCCeEECCCCCHHHHHHHHHhcCCeEE--EEEeCCCCEEEEEEH
Confidence 0 0345556777889999999999999999888887 999999999999998
No 68
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.82 E-value=3e-09 Score=120.35 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=99.9
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecC--ccccccCCCCcCCeeEEEeecCCCCCCCCcccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVY 498 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~--~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~ 498 (704)
+++++.|.+++.++.+++|++|+++++.++ +++++||+|+ + ++++|+|+.+|++.. ...+.+
T Consensus 113 ~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~-~~s~~pVvd~g~~------------~~lvGiVt~rDl~~~---~~~~~~ 176 (511)
T 3usb_A 113 KRSESGVISDPFFLTPEHQVYDAEHLMGKY-RISGVPVVNNLDE------------RKLVGIITNRDMRFI---QDYSIK 176 (511)
T ss_dssp HTSSSCSSSSCCCBCTTSBHHHHHHHHHHH-CCSEEEEESCTTT------------CBEEEEEEHHHHTTC---CCSSSB
T ss_pred hccccccccCCEEECCCCCHHHHHHHHHHc-CCcEEEEEecCCC------------CEEEEEEEehHhhhh---ccCCCc
Confidence 457788999999999999999999999999 8999999997 5 799999999999752 345678
Q ss_pred ccccccc-CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc
Q psy6631 499 VEDFMVR-DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ 553 (704)
Q Consensus 499 V~dvM~~-~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~ 553 (704)
|+++|++ +++++++++++.|+.+.|. ..+.+.+||+|+ ++.+|.++.+++....
T Consensus 177 V~~vM~~~~~vtv~~~~~l~eal~~m~-~~~i~~lpVVDe~g~l~GiIT~~Dil~~~ 232 (511)
T 3usb_A 177 ISDVMTKEQLITAPVGTTLSEAEKILQ-KYKIEKLPLVDNNGVLQGLITIKDIEKVI 232 (511)
T ss_dssp HHHHCCCCCCCCEETTCCHHHHHHHHH-HHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHhcccCCCEEECCCCCHHHHHHHHH-HcCCCEEEEEeCCCCEeeeccHHHHHHhh
Confidence 9999998 9999999999999999995 567788999985 5668888888775543
No 69
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.80 E-value=2e-09 Score=103.83 Aligned_cols=112 Identities=11% Similarity=0.011 Sum_probs=89.6
Q ss_pred cccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 495 YNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 495 ~~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
...+|+|+|+ +++.++++++++.|+++.|. ..+...+||+++ ++.+|.++++++........
T Consensus 40 ~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~-~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------------- 105 (172)
T 3lhh_A 40 DERTISSLMVPRSDIVFLDLNLPLDANLRTVM-QSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE------------- 105 (172)
T ss_dssp ---CTTTTSEEGGGCCCEETTSCHHHHHHHHH-TCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC-------------
T ss_pred CCCCHHHhCccHHHeEEEcCCCCHHHHHHHHH-hCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC-------------
Confidence 4568999999 78899999999999999995 567788999986 56788888888654321100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|.++.++.|++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 106 ---------------~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~~--pVvd~~g~lvGiit~ 155 (172)
T 3lhh_A 106 ---------------RLELVDLVKNCNFVPNSLSGMELLEHFRTTGSQMV--FVVDEYGDLKGLVTL 155 (172)
T ss_dssp ---------------CCCGGGGCBCCEEEETTCCHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEH
T ss_pred ---------------cccHHHHhcCCeEeCCCCCHHHHHHHHHHcCCeEE--EEEeCCCCEEEEeeH
Confidence 01355666778889999999999999999888876 999999999999999
No 70
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.79 E-value=9.9e-10 Score=100.51 Aligned_cols=111 Identities=13% Similarity=0.004 Sum_probs=86.4
Q ss_pred cccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 495 YNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 495 ~~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
.+.+|+|+|+ +++.++++++++.|+++.|.+ .+...+||+++ ++.+|.++.+++......
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~-~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~--------------- 66 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIE-TAHSRFPVYEDDRDNIIGILLAKDLLRYMLE--------------- 66 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHH-SCCSEEEEESSSTTCEEEEEEGGGGGGGGTC---------------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHH-cCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc---------------
Confidence 3568999999 778999999999999999954 66778899886 466777777664332210
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ..+..++|.++.++.|++++.++.+.|...+.+.+ ||+|++|+++|++|+
T Consensus 67 ---~-----------~~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~~--pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 67 ---P-----------ALDIRSLVRPAVFIPEVKRLNVLLREFRASRNHLA--IVIDEHGGISGLVTM 117 (129)
T ss_dssp ---T-----------TSCGGGGCBCCCEEETTCBHHHHHHHHHTSSCCEE--EEECC-CCEEEEEEH
T ss_pred ---C-----------CcCHHHHhCCCeEeCCCCcHHHHHHHHHhcCCeEE--EEEeCCCCEEEEEEH
Confidence 0 01345566677888999999999999999888876 999999999999999
No 71
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.77 E-value=1.3e-09 Score=100.01 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=87.6
Q ss_pred cccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 497 VYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 497 ~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
.+|+|+|+ +++.++++++++.|+++.|. ..+...+||+++ ++.+|.++++++...........
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~-~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~------------ 68 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLT-HSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFT------------ 68 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHH-TCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCC------------
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHH-HCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccc------------
Confidence 47899997 46899999999999999995 577788999864 56789888888755432211000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.....++|.++.++.|++++.++...|...+.+.+ ||+|++|+++|++|+
T Consensus 69 -------------~~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~~--~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 69 -------------KEIMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVG--LVVDEYGDIQGLVTV 118 (130)
T ss_dssp -------------HHHHHHHSBCCCEEETTCBHHHHHHHHHHHCCCEE--EEECTTSCEEEEEEH
T ss_pred -------------hhhHHHhccCCeEeCCCCcHHHHHHHHHhcCCeEE--EEEcCCCCEEEEeeH
Confidence 00233455667788999999999999999888776 999999999999998
No 72
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.76 E-value=1.5e-09 Score=122.36 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=85.8
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
.+++++|.++++++++++|++|+++++.++ +++++||+|++ ++++|+|+.+|++... ..+.+|+
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~-~~s~~PVvd~~------------~~lvGiVt~rDL~~~~---~~~~~v~ 152 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYH-GFAGFPVVTEN------------NELVGIITGRDVRFVT---DLTKSVA 152 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSS-CCCEEEEECSS------------SBEEEEEEHHHHTTCC---CTTSBGG
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHc-CCcEEEEEccC------------CEEEEEEEHHHHhhcc---cCCCcHH
Confidence 357889999999999999999999999998 89999999977 7999999999997432 3567899
Q ss_pred cccc-c-CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHh
Q psy6631 501 DFMV-R-DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRRE 550 (704)
Q Consensus 501 dvM~-~-~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~ 550 (704)
|+|+ + ++.++.+++++.|+.+.| ..++++.+||+|+ ++.+|.++.+++.
T Consensus 153 diM~p~~~~vtv~~~~~l~ea~~~m-~~~~i~~lpVVDe~G~l~GiIT~~DIl 204 (496)
T 4fxs_A 153 AVMTPKERLATVKEGATGAEVQEKM-HKARVEKILVVNDEFQLKGMITAKDFH 204 (496)
T ss_dssp GTSEEGGGCCEEECC----CGGGTC-C---CCCEEEECTTSBCCEEECCC---
T ss_pred HHhcCCCCCEEECCCCCHHHHHHHH-HHcCCCEEEEEcCCCCEEEeehHhHHH
Confidence 9999 5 599999999999999999 5678888999986 4556666655544
No 73
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.72 E-value=3.1e-09 Score=96.76 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=86.3
Q ss_pred ccccccccccC--ceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 496 NVYVEDFMVRD--VKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 496 ~~~V~dvM~~~--v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
+.+|+|+|+++ +.++++++++.|+++.|.+ .+...+||+++ ++.+|.++++++...... .+
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~-~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~--------------~~ 66 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIE-SAHSRFPVISEDKDHIEGILMAKDLLPFMRS--------------DA 66 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHH-HCCSEEEEESSSTTCEEEEEEGGGGGGGGST--------------TC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHh-CCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc--------------cC
Confidence 45789999954 9999999999999999954 55667888876 466787777765432210 00
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. +.+..++|.++.++.|++++.++...|...+.+.+ ||+|++|+++|++|+
T Consensus 67 --------~-----~~~v~~~m~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 67 --------E-----AFSMDKVLRTAVVVPESKRVDRMLKEFRSQRYHMA--IVIDEFGGVSGLVTI 117 (127)
T ss_dssp --------C-----CCCHHHHCBCCCEEETTCBHHHHHHHHHHTTCCEE--EEECTTSCEEEEEEH
T ss_pred --------C-----CCCHHHHcCCCeEECCCCcHHHHHHHHHhcCCeEE--EEEeCCCCEEEEEEH
Confidence 0 01345666767789999999999999999888887 999999999999998
No 74
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.72 E-value=3.4e-09 Score=96.79 Aligned_cols=113 Identities=12% Similarity=0.133 Sum_probs=89.5
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGV 575 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~ 575 (704)
..+|+|+|++++.++.+++++.|+.+.|.+ .+...+||+|+++.+|.++..++........ .
T Consensus 3 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~----------------~- 64 (133)
T 2ef7_A 3 EEIVKEYMKTQVISVTKDAKLNDIAKVMTE-KNIGSVIVVDGNKPVGIITERDIVKAIGKGK----------------S- 64 (133)
T ss_dssp CCBGGGTSBCSCCEEETTCBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHHHHHTTC----------------C-
T ss_pred cccHHHhccCCCEEECCCCcHHHHHHHHHh-cCCCEEEEEECCEEEEEEcHHHHHHHHhcCC----------------C-
Confidence 468999999999999999999999999954 4566788888666788888887654321100 0
Q ss_pred CCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 576 SASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ..+..++|. ++..+.|++++.++...|...+.+++ ||+|++|+++|++|+
T Consensus 65 ----~-----~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l--~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 65 ----L-----ETKAEEFMTASLITIREDSPITGALALMRQFNIRHL--PVVDDKGNLKGIISI 116 (133)
T ss_dssp ----T-----TCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEH
T ss_pred ----c-----ccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEE--EEECCCCeEEEEEEH
Confidence 0 013556675 78889999999999999998888877 999999999999999
No 75
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.70 E-value=4.1e-09 Score=97.34 Aligned_cols=113 Identities=14% Similarity=0.113 Sum_probs=87.9
Q ss_pred ccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 496 NVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 496 ~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
+.+|+|+|+ +++.++++++++.|+++.|.+ .+...+||+++ ++.+|.++.+++....... .
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~-~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~-------------~- 66 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVID-AAHSRYPVIGESHDDVLGVLLAKDLLPLILKA-------------D- 66 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHH-HCCSEEEEESSSTTCEEEEEEGGGGGGGGGSS-------------S-
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHh-CCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhc-------------c-
Confidence 457999999 678999999999999999954 56678888886 4667877777754322100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ...+..++|.++.++.|++++.++...|...+.+.+ ||+|++|+++|+||+
T Consensus 67 --~----------~~~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~~--~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 67 --G----------DSDDVKKLLRPATFVPESKRLNVLLREFRANHNHMA--IVIDEYGGVAGLVTI 118 (136)
T ss_dssp --G----------GGCCGGGTCBCCCEEETTCBHHHHHHHHHHHTCCEE--EEECTTSCEEEEEEH
T ss_pred --C----------CCcCHHHHcCCCeEECCCCcHHHHHHHHHhcCCeEE--EEEeCCCCEEEEEEH
Confidence 0 001355667778889999999999999999888877 999999999999998
No 76
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.70 E-value=1.4e-09 Score=122.64 Aligned_cols=114 Identities=17% Similarity=0.200 Sum_probs=3.0
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
.+++|+|++++.++.++++++|+++.|.++ +++.+||+|++ ++++|+|+.+|++... ..+.+|+
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~-~~~~~pVvd~~------------~~lvGivt~~Dl~~~~---~~~~~v~ 158 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEY-KIGGLPVVDEE------------GRLVGLLTNRDVRFEK---NLSKKIK 158 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHc-CceEEEEEcCC------------CEEEEEEEHHHHHhhc---CCCCcHH
Confidence 357899999999999999999999999988 89999999976 7899999999997532 3467899
Q ss_pred ccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 501 DFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 501 dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
++|++ ++.++++++++.|+++.|. ..++..+||+|+ ++.+|.++..++..
T Consensus 159 ~im~~~~~~~~v~~~~~l~ea~~~m~-~~~~~~lpVVd~~g~lvGiIt~~Dll~ 211 (494)
T 1vrd_A 159 DLMTPREKLIVAPPDISLEKAKEILH-QHRIEKLPLVSKDNKLVGLITIKDIMS 211 (494)
T ss_dssp ---------------------------------------------------CHH
T ss_pred HHhCCCCCCeEECCCCCHHHHHHHHH-HcCCcEEEEEcCCCeEEEEEEHHHHHh
Confidence 99998 9999999999999999994 567778888875 45556555555433
No 77
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.67 E-value=2.3e-09 Score=120.80 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=3.5
Q ss_pred cccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccc
Q psy6631 421 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 500 (704)
Q Consensus 421 ~~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~ 500 (704)
.+++++|.+++.++++++|++|+++++.++ +++.+||+| + ++++|+|+.+|+... ...+.+|+
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~~~-~~s~~pVvd-~------------g~lvGIVt~rDl~~~---~~~~~~V~ 150 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAREY-GFSGFPVVE-Q------------GELVGIVTGRDLRVK---PNAGDTVA 150 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHHHh-CCCEEEEEE-C------------CEEEEEEEhHHhhhc---cccCCcHH
Confidence 357899999999999999999999999998 899999999 5 689999999999643 23567899
Q ss_pred cccc-c-CceEEeCCCCHHHHHHHhHhcCCCceeecccCC-CceEEeehHHH
Q psy6631 501 DFMV-R-DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS-GKFEQMEIKRR 549 (704)
Q Consensus 501 dvM~-~-~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~-~~~~~i~~~~~ 549 (704)
++|+ + ++.++.+++++.|+.++| ..++++.+||+|++ +.+|.++.+++
T Consensus 151 ~vMtp~~~~vtv~~~~~l~ea~~~m-~~~~i~~lpVVDe~g~lvGiIT~~Di 201 (490)
T 4avf_A 151 AIMTPKDKLVTAREGTPLEEMKAKL-YENRIEKMLVVDENFYLRGLVTFRDI 201 (490)
T ss_dssp ----------------------------------------------------
T ss_pred HHhccCCCCEEECCCCcHHHHHHHH-HHcCCCEEEEEcCCCcEEEEEehHHh
Confidence 9999 5 699999999999999999 46778889999863 44444444443
No 78
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.67 E-value=2.9e-09 Score=99.01 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=92.3
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
...+|+|+|++ +++++.+++++.|+.+.|. ..+...+||+|+ ++.+|.+++.++.............. .++..
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~-~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~---~~~~~ 78 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLV-ENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFN---AVQKL 78 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHH-HTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHH---HHHTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHH-HcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchH---HHHHH
Confidence 34689999998 8999999999999999995 466788999986 56789888888754332111111111 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ... ...+..++|. ++..+.|++++.++...|...+++.+ ||||++|+++|+||+
T Consensus 79 ~-------~~~--~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l--~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 79 L-------SKT--NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRL--PVVDSDGKLVGIITR 134 (152)
T ss_dssp --------------CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEE--EEECTTSBEEEEEEH
T ss_pred H-------HHh--ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEE--EEECCCCcEEEEEEH
Confidence 0 000 0114566777 68889999999999999999998887 999999999999998
No 79
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.66 E-value=2.5e-09 Score=121.18 Aligned_cols=167 Identities=11% Similarity=0.085 Sum_probs=85.4
Q ss_pred HHHHHHHHHhCCchhHHHHHHH-------HHHHHHHHhh-----cCC--ChHHHHHHHhcCCCCCCCCCCCccccccccc
Q psy6631 359 SVSVIMFEMTGQITHIIPVMIA-------VLISNAVAAL-----LQP--SLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 424 (704)
Q Consensus 359 s~~viv~ElTG~~~~~lPimia-------~~is~~va~~-----l~~--siy~~~l~~r~~p~l~~~~~~~~~l~~~~V~ 424 (704)
+.+.|.+|||+++.+.+|+|.+ .-++..++.. ++. +.-+..-..+ .-.+++
T Consensus 47 ~~v~l~~eLt~~~~~~iP~vsa~md~~t~~~la~~ia~~gg~gii~~~~t~e~~~~~v~---------------~v~~~~ 111 (514)
T 1jcn_A 47 DEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVR---------------KVKNFE 111 (514)
T ss_dssp GGCBCCEESSSSCEESSCEEECCCTTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHH---------------HHHTCC
T ss_pred ceeEEEeeccCCeeEeceEEEEehhhhhhhhHHHHHHhcCCeeEEecCCCHHHHHHHHH---------------hhhhhh
Confidence 4466778999999888898876 3344444432 111 1111111111 113688
Q ss_pred cccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccccccc
Q psy6631 425 DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVEDFMV 504 (704)
Q Consensus 425 diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~dvM~ 504 (704)
|+|.+++.++.++++++|++++|.++ +++.+||+|++. .+++++|+|+.+|+.... ......+|+++|+
T Consensus 112 ~im~~~~~~v~~~~tv~ea~~~m~~~-~~~~~pVvd~~~---------~~~~lvGiVt~~Dl~~~~-~~~~~~~v~~vm~ 180 (514)
T 1jcn_A 112 QGFITDPVVLSPSHTVGDVLEAKMRH-GFSGIPITETGT---------MGSKLVGIVTSRDIDFLA-EKDHTTLLSEVMT 180 (514)
T ss_dssp TTSCSSCCCCCC------------------CEESCC-----------------CCEECTTTTC-----------------
T ss_pred hccccCCEEECCCCCHHHHHHHHHhc-CCCEEEEEeCCC---------cCCEEEEEEEHHHHHhhh-hccCCCCHHHHhC
Confidence 99999999999999999999999988 899999998720 027899999999997542 1235678999999
Q ss_pred c--CceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCccccccc
Q psy6631 505 R--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTP 563 (704)
Q Consensus 505 ~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~ 563 (704)
+ +++++++++++.|+.+.|.+ .+...+||+|+++. ++|.++|.+++.
T Consensus 181 ~~~~~~tv~~~~~l~ea~~~m~~-~~~~~lpVVd~~g~-----------lvGiIt~~Dll~ 229 (514)
T 1jcn_A 181 PRIELVVAPAGVTLKEANEILQR-SKKGKLPIVNDCDE-----------LVAIIARTDLKK 229 (514)
T ss_dssp CCBCCCCEETTCCSTTTTTHHHH-HTCSCCCEESSSSC-----------CC----CCCCSS
T ss_pred CCCCCeEECCCCCHHHHHHHHHH-cCCCcccEECCCCe-----------EEEEEEHHHHHH
Confidence 8 99999999999999999964 45556777775332 445555555555
No 80
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.66 E-value=2.4e-08 Score=112.47 Aligned_cols=115 Identities=16% Similarity=0.186 Sum_probs=99.2
Q ss_pred ccccccccceEEecCCCCHHHHHHHHHhcCCccEEEeec--CccccccCCCCcCCeeEEEeecCCCCCCCCccccccccc
Q psy6631 422 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE--SSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYV 499 (704)
Q Consensus 422 ~V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd--~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V 499 (704)
+++|+|.+++.++.++++++++++.+.++ +++.+||+| ++ ++++|+|+.+|++... ..+.+|
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~-~~~~~pVvd~~~~------------~~lvGivt~~Dl~~~~---~~~~~v 154 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQRY-RISGVPIVETLAN------------RKLVGIITNRDMRFIS---DYNAPI 154 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHHT-TCSEEEEESCTTT------------CBEEEEEEHHHHHHCS---CSSSBT
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHHc-CCCEEEEEEeCCC------------CEEEEEEEHHHHhhhc---cCCCcH
Confidence 46889999999999999999999999998 899999998 55 7899999999997542 246789
Q ss_pred cccccc-CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhc
Q psy6631 500 EDFMVR-DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQ 553 (704)
Q Consensus 500 ~dvM~~-~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~ 553 (704)
+++|++ ++.++++++++.|+++.|. ..+...+||+|+ ++.+|.++..++....
T Consensus 155 ~~im~~~~~~~v~~~~~l~~a~~~m~-~~~~~~lpVVd~~g~lvGivt~~Dil~~~ 209 (491)
T 1zfj_A 155 SEHMTSEHLVTAAVGTDLETAERILH-EHRIEKLPLVDNSGRLSGLITIKDIEKVI 209 (491)
T ss_dssp TTSCCCSCCCCEETTCCHHHHHHHHH-HTTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred HHHcCCCCCEEECCCCCHHHHHHHHH-HcCCCEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 999998 8999999999999999995 577888999985 5678888888876544
No 81
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.65 E-value=6e-09 Score=95.24 Aligned_cols=113 Identities=15% Similarity=0.061 Sum_probs=85.6
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
...+|+|+|++ ++.++++++++.|+++.|. ..+...+||+++ ++.+|.++.+++........
T Consensus 4 ~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~-~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~------------- 69 (130)
T 3i8n_A 4 QDVPVTQVMTPRPVVFRVDATMTINEFLDKHK-DTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS------------- 69 (130)
T ss_dssp ---CCTTTSCCBCCCCEEETTSBHHHHHHHTT-TCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT-------------
T ss_pred CcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHH-hCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC-------------
Confidence 45789999994 5678999999999999994 456677888875 46688888777654321100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+ ..+..++|.++.++.|++++.++...|...+.+.+ ||+|++|+++|++|+
T Consensus 70 ------------~--~~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~~--~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 70 ------------G--QKQLGAVMRPIQVVLNNTALPKVFDQMMTHRLQLA--LVVDEYGTVLGLVTL 120 (130)
T ss_dssp ------------T--TSBHHHHSEECCEEETTSCHHHHHHHHHHHTCCEE--EEECTTSCEEEEEEH
T ss_pred ------------C--cCCHHHHhcCCcCcCCCCcHHHHHHHHHHcCCeEE--EEEcCCCCEEEEEEH
Confidence 0 01344566667789999999999999999888887 999999999999998
No 82
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.64 E-value=3.2e-09 Score=118.25 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=1.5
Q ss_pred cccccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccccc
Q psy6631 423 VEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVEDF 502 (704)
Q Consensus 423 V~diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~dv 502 (704)
-++.|..+++++.|+.|+.|+.+++.++ +++++||+|+. ..+++|+|+|+.+|+... ..+.+|+++
T Consensus 140 ~e~g~i~dPvtl~P~~Tv~da~~l~~~~-~isgvpVvd~g---------~~~~kLvGIvT~RD~rf~----d~~~~V~ev 205 (556)
T 4af0_A 140 YENGFITDPLCLGPDATVGDVLEIKAKF-GFCGVPITETG---------EPDSKLLGIVTGRDVQFQ----DAETPIKSV 205 (556)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCccCCCeEcCCCCCHHHHHHHHHHh-CCCcccccccc---------CcCCEEEEEEeccccccc----ccceEhhhh
Confidence 4556888999999999999999999998 89999999874 123799999999998652 346789999
Q ss_pred cccCceEEeCCCCHHHHHHHhHhcCCCceeecccCC-CceEEeehHH
Q psy6631 503 MVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS-GKFEQMEIKR 548 (704)
Q Consensus 503 M~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~-~~~~~i~~~~ 548 (704)
|+++++++.++.+++|+.++| ...++..+||+|++ +.++.++.+|
T Consensus 206 MT~~lvt~~~~~~leeA~~iL-~~~kieklpVVd~~g~LvGlIT~kD 251 (556)
T 4af0_A 206 MTTEVVTGSSPITLEKANSLL-RETKKGKLPIVDSNGHLVSLVARSD 251 (556)
T ss_dssp -----------------------------------------------
T ss_pred cccceEEecCCCCHHHHHHHH-HHccccceeEEccCCcEEEEEEech
Confidence 999999999999999999999 56788889999864 3344333333
No 83
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.62 E-value=1.4e-08 Score=96.78 Aligned_cols=115 Identities=13% Similarity=0.119 Sum_probs=86.9
Q ss_pred cccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCC
Q psy6631 497 VYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 497 ~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
..++++|+ +++.++.+++++.||.+.| ...+...+||+|+ ++.+|.++.++.......... . .+.+.
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m-~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~----~-~~~~~---- 84 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLL-SQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDL----S-QEIMA---- 84 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHH-TTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTC----C-HHHHT----
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHH-HHcCCcEEEEEcCCCcEEEEEEecchhhhhhhccc----c-ccccc----
Confidence 57889998 4799999999999999999 4577778899876 567899998886543211000 0 00000
Q ss_pred CCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|+ ++.++.|++++.++...|...++ +||||++|+++|+||+
T Consensus 85 ------------~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~~----lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 85 ------------DTDIVHMTKTDVAVVSPDFTITEVLHKLVDESF----LPVVDAEGIFQGIITR 133 (156)
T ss_dssp ------------TSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSSE----EEEECTTSBEEEEEEH
T ss_pred ------------ccCHHHhhcCCceecccccHHHHHHHHHHHcCC----eEEEecCCEEEEEEEH
Confidence 114567777 88899999999999999876554 4999999999999999
No 84
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.62 E-value=8.3e-09 Score=92.62 Aligned_cols=108 Identities=14% Similarity=0.175 Sum_probs=85.7
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCC
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVS 576 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~ 576 (704)
+|+|+|++++.++++++++.|+++.|.+ .+...+||+++ ++.+|.++..++........
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~------------------- 61 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIK-HNINHLPIVDEHGKLVGIITSWDIAKALAQNK------------------- 61 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHH-HTCSCEEEECTTSBEEEEECHHHHHHHHHTTC-------------------
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHH-cCCCeEEEECCCCCEEEEEEHHHHHHHHHhcc-------------------
Confidence 6899999999999999999999999964 56677888874 66688888777654321100
Q ss_pred CCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 577 ASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.+..++|. ++..+.|++++.++...|...+.+.+ ||+|++|+++|++|+
T Consensus 62 ----------~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l--~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 62 ----------KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGV--PVVDDYRRVVGIVTS 111 (122)
T ss_dssp ----------CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEE--EEECTTCBEEEEEEH
T ss_pred ----------cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeE--EEECCCCCEEEEEeH
Confidence 02344454 67788999999999999998888887 999999999999998
No 85
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=98.62 E-value=9.1e-07 Score=98.98 Aligned_cols=185 Identities=15% Similarity=0.105 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh--hcchh----HHHHHHHHHHHHHH---hhhhhccccC
Q psy6631 163 PQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFL--QKNRF----LYPGIVVLLATSVS---FPLGLGKYMA 233 (704)
Q Consensus 163 ~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l--~~~~~----l~p~l~gllvg~l~---fP~~~G~~~~ 233 (704)
..-+...+++|+++|+++.+|.++..+...++... ..... ..++| +.+++++++++.+. .|..-|.+
T Consensus 33 ~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsG-- 108 (465)
T 1ots_A 33 LAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGA--LVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSG-- 108 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCC--
Confidence 45677789999999999999999988876554321 11110 01122 33444455555442 35544432
Q ss_pred CCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHHHHHHHhhCCccccccchhhHHHHHHH
Q psy6631 234 GDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYIFSIIASTIPVPSGSFIPVFKIGAAFG 313 (704)
Q Consensus 234 g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~~t~lt~g~g~pGGiF~Psl~IGA~~G 313 (704)
.+++...+++.. .... .-....|++.+.+|.++|.+.|---|+.-+||++|
T Consensus 109 -----ip~v~~~l~~~~--------------------~~~~----~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig 159 (465)
T 1ots_A 109 -----IPEIEGALEDQR--------------------PVRW----WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIG 159 (465)
T ss_dssp -----HHHHHHHHTTCS--------------------CCCH----HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHH
T ss_pred -----hHHHHHHHhCCC--------------------CCCc----HHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHH
Confidence 345544443210 0011 12357899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHHHh-CCch--h--HHHHHHHHHHHHHH
Q psy6631 314 RMIGEIIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFEMT-GQIT--H--IIPVMIAVLISNAV 387 (704)
Q Consensus 314 ~~~G~~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~ElT-G~~~--~--~lPimia~~is~~v 387 (704)
..++..+.. .+ ..+--.+...||||=+|++.+ |++.++..+|.. ++++ . ++|.++++++|+.+
T Consensus 160 ~~l~~~~~l-~~----------~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v 228 (465)
T 1ots_A 160 RMVLDIFRL-KG----------DEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIM 228 (465)
T ss_dssp HHHHHHTTC-CS----------HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcc-CC----------HHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 999987531 00 123457888999999999988 899999999865 4444 4 88999999999999
Q ss_pred Hhhc
Q psy6631 388 AALL 391 (704)
Q Consensus 388 a~~l 391 (704)
++.+
T Consensus 229 ~~~~ 232 (465)
T 1ots_A 229 YRIF 232 (465)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 86
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.62 E-value=2e-08 Score=100.15 Aligned_cols=109 Identities=6% Similarity=0.040 Sum_probs=88.2
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhc--CCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKEN--RSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~--~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
..+|+++|++++.++++++++.++++.|.+. ++...++|+++ ++.+|.++.+++... .+
T Consensus 53 ~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~------------------~~ 114 (205)
T 3kxr_A 53 ENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH------------------EP 114 (205)
T ss_dssp TTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS------------------CT
T ss_pred cchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC------------------CC
Confidence 4589999999999999999999999999652 26778888885 566887777764210 00
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+.+..++|. ++.++.|++++.++.+.|...++..+ ||||++|+++|+||+
T Consensus 115 -------------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 115 -------------HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIEL--PVIDDAGELIGRVTL 165 (205)
T ss_dssp -------------TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEE--EEECTTSBEEEEEEH
T ss_pred -------------cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEE--EEEcCCCeEEEEEEH
Confidence 013567776 78899999999999999999888877 999999999999999
No 87
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.62 E-value=3.5e-09 Score=119.70 Aligned_cols=120 Identities=9% Similarity=0.089 Sum_probs=3.9
Q ss_pred ccccccc-cccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccc
Q psy6631 420 NVYVEDF-MVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVY 498 (704)
Q Consensus 420 ~~~V~di-M~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~ 498 (704)
.++..++ |++++.++.+++|++|+++++.++ +++.+||+|++. ..++++|+|+.+|++.. ....+.+
T Consensus 95 ~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~-~~s~~pVvd~~~---------~~g~lvGiVt~~Dl~~~--~~~~~~~ 162 (503)
T 1me8_A 95 AVKNFKAGFVVSDSNVKPDQTFADVLAISQRT-THNTVAVTDDGT---------PHGVLLGLVTQRDYPID--LTQTETK 162 (503)
T ss_dssp HHHTTTC-------------------------------------------------------------------------
T ss_pred hhhhcccCcccCCeEECCCCcHHHHHHHHHHc-CceEEEEEECCC---------cCCeEEEEEEHHHHHhh--hccccCc
Confidence 4455666 999999999999999999999998 899999998530 01589999999999753 3345678
Q ss_pred cccccccC--ceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCccccccc
Q psy6631 499 VEDFMVRD--VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTP 563 (704)
Q Consensus 499 V~dvM~~~--v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~ 563 (704)
|+|+|+++ +.++++++++.|+++.| ..++...+||+|+++. ++|.+++.+++.
T Consensus 163 V~diM~~~~~~~tv~~~~sl~ea~~~m-~~~~i~~lpVVDe~g~-----------lvGiIT~~Dil~ 217 (503)
T 1me8_A 163 VSDMMTPFSKLVTAHQDTKLSEANKII-WEKKLNALPIIDDDQH-----------LRYIVFRKDYDR 217 (503)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHhCCCCCCEEEcCCCcHHHHHHHH-HHcCCCEEEEEcCCCe-----------EEEEEEecHHHH
Confidence 99999988 99999999999999999 4577888899986432 445555555555
No 88
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.62 E-value=8.4e-09 Score=97.62 Aligned_cols=112 Identities=13% Similarity=0.114 Sum_probs=87.4
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccCC--CceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS--GKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~--~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
...+|+|+|++ ++.++++++++.|+++.|.+ .+...+||++++ +.+|.++.+++....... .
T Consensus 36 ~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~-~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------~------- 101 (156)
T 3oi8_A 36 SDLEVRDAMITRSRMNVLKENDSIERITAYVID-TAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP------E------- 101 (156)
T ss_dssp TTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHH-HCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG------G-------
T ss_pred CCCCHhheeeeHHHeEEECCCCCHHHHHHHHHH-CCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC------C-------
Confidence 34689999997 79999999999999999954 556788888763 567877777654322110 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|.++.++.|++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 102 ---------------~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~~--~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 102 ---------------QFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMA--IVIDEYGGTSGLVTF 151 (156)
T ss_dssp ---------------GCCHHHHCBCCCEEETTSBHHHHHHHHHHTTCCEE--EEECTTSSEEEEEEH
T ss_pred ---------------cccHHHHcCCCEEECCCCCHHHHHHHHHhcCCeEE--EEECCCCCEEEEEEH
Confidence 01345566777888999999999999998888876 999999999999987
No 89
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.60 E-value=1.5e-08 Score=93.59 Aligned_cols=112 Identities=10% Similarity=0.061 Sum_probs=88.8
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCC---CceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS---GKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~---~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
..+|+|+|++++.++.+++++.|+.+.|.+ .+...+||+|++ +.+|.+++.++........
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~--------------- 67 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAK-NRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL--------------- 67 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC---------------
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHH-cCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC---------------
Confidence 468999999999999999999999999954 557788998875 5788888887654321100
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+ . ..+..++|. ++.++.|+ ++.++...|...+.+++ ||+|++|+++|++|+
T Consensus 68 -----~----~--~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l--~Vvd~~g~~~Giit~ 119 (141)
T 2rih_A 68 -----D----L--DGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHV--VVVNKNGELVGVLSI 119 (141)
T ss_dssp -----C----T--TSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEH
T ss_pred -----C----C--CCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEE--EEEcCCCcEEEEEEH
Confidence 0 0 014566776 78889999 99999999999988887 999999999999998
No 90
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.59 E-value=1.6e-08 Score=94.33 Aligned_cols=119 Identities=13% Similarity=0.075 Sum_probs=89.9
Q ss_pred ccccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 494 IYNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 494 ~~~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
....+|+|+|+ +++.++++++++.|+.+.|. ..+...+||+|+ ++.+|.+++.++..........+...
T Consensus 12 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~-~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~------- 83 (150)
T 3lqn_A 12 FQQIFVKDLMISSEKVAHVQIGNGLEHALLVLV-KSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFER------- 83 (150)
T ss_dssp HHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHH-HHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGG-------
T ss_pred hhcCChhhcccCCCceEEECCCCcHHHHHHHHH-HcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhH-------
Confidence 45679999999 56999999999999999995 466778899974 66789999888765432111110000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ...+..++|. ++.++.|++++.++...|...++ + ||||++|+++|+||+
T Consensus 84 -----------~--~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l--~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 84 -----------L--EEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--I--CAVNEDGYFEGILTR 134 (150)
T ss_dssp -----------G--GGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--E--EEECTTCBEEEEEEH
T ss_pred -----------H--hcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--E--EEECCCCcEEEEEEH
Confidence 0 0114566776 78899999999999999987776 3 999999999999999
No 91
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.59 E-value=3.2e-08 Score=93.70 Aligned_cols=125 Identities=10% Similarity=0.104 Sum_probs=94.4
Q ss_pred ccccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 494 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 494 ~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
....+|+|+|++ +.++++++++.|+++.|.+ .+...+||+|+ ++.+|.++..++....-....
T Consensus 14 l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------------- 77 (159)
T 3fv6_A 14 LKKLQVKDFQSI-PVVIHENVSVYDAICTMFL-EDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQE-------------- 77 (159)
T ss_dssp HTTCBGGGSCBC-CCEEETTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSC--------------
T ss_pred HhhCCHHHHcCC-CEEECCCCcHHHHHHHHHH-CCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCc--------------
Confidence 345789999998 4599999999999999954 56778999984 677898888886553210000
Q ss_pred CCCCCCCCCCCCCCCCCCCccc---CccccCCCchhhhcccccccccCCCCcCcccCCCC---CcchHHHH--HHHHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC---PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYT---TVTGAESR--IRMAFEA 644 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~---~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g---~l~G~vtr--~r~a~e~ 644 (704)
.. ..+..++|. ++.++.|++++.++...|...+++.+ ||||++| +++|+||+ +-.++..
T Consensus 78 ---------~~--~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 78 ---------LT--SVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDAL--PVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ---------TT--TCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEE--EEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ---------cc--CcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEE--EEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 00 013445554 67889999999999999999999887 9999999 99999999 5555666
Q ss_pred Hhc
Q psy6631 645 IFH 647 (704)
Q Consensus 645 ~~~ 647 (704)
+..
T Consensus 145 ~~~ 147 (159)
T 3fv6_A 145 LSE 147 (159)
T ss_dssp HHT
T ss_pred Hhh
Confidence 555
No 92
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.56 E-value=2.5e-08 Score=94.18 Aligned_cols=131 Identities=8% Similarity=0.062 Sum_probs=92.4
Q ss_pred ccccccccccccCceEEeCCCCHHHHHHHhHhcCCCce-eecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 494 IYNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRV-FPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 494 ~~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~V-vpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
....+|+|+|+++++++.+++++.|+++.|.+ .+... +||+|+++.+|.+++.++.......- ...+...+.+...
T Consensus 13 ~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~-~~~~~~~~Vvd~~~~vGivt~~dl~~~~~~~~-~~~~~~~~~~~~~- 89 (157)
T 1o50_A 13 MKVKDVCKLISLKPTVVEEDTPIEEIVDRILE-DPVTRTVYVARDNKLVGMIPVMHLLKVSGFHF-FGFIPKEELIRSS- 89 (157)
T ss_dssp CBHHHHTTSSCCCCEEECTTCBHHHHHHHHHH-STTCCEEEEEETTEEEEEEEHHHHHHHHHHHH-HCCCC-------C-
T ss_pred hccccHhhcccCCCceECCCCCHHHHHHHHHh-CCCCccEEEEECCEEEEEEEHHHHHHHHhhhH-HhhhccHHHHHHH-
Confidence 45678999999999999999999999999954 56777 88887667789999888754321000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.... ...+..++|.++.++.|++++.++...|...+++.+ ||||++|+++|+|++
T Consensus 90 ------~~~~--~~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~vGiit~ 144 (157)
T 1o50_A 90 ------MKRL--IAKNASEIMLDPVYVHMDTPLEEALKLMIDNNIQEM--PVVDEKGEIVGDLNS 144 (157)
T ss_dssp ------CCCC--SSCBHHHHCBCCCCBCTTSBHHHHHHHHHHHTCSEE--EEECTTSCEEEEEEH
T ss_pred ------HHHH--cCCcHHHHcCCCeEECCCCCHHHHHHHHHHCCCcEE--EEEcCCCEEEEEEEH
Confidence 0000 111355666667889999999999999999888887 999999999999998
No 93
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=98.55 E-value=3.1e-06 Score=94.61 Aligned_cols=184 Identities=12% Similarity=0.123 Sum_probs=124.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcc--hhHHHHHHHHH----HHHHH---hhhhhccccC
Q psy6631 163 PQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKN--RFLYPGIVVLL----ATSVS---FPLGLGKYMA 233 (704)
Q Consensus 163 ~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~--~~l~p~l~gll----vg~l~---fP~~~G~~~~ 233 (704)
..-+...+++|+++|+++.+|.++..+...++... .......+ .|+.+++.+.+ .+.+. .|..-|.+
T Consensus 29 ~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsG-- 104 (466)
T 3nd0_A 29 PRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQL--AQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSG-- 104 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCC--
Confidence 45677789999999999999999998877654422 11111111 23444432222 22121 24443332
Q ss_pred CCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHHHHHHHhhCCccccccchhhHHHHHHH
Q psy6631 234 GDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYIFSIIASTIPVPSGSFIPVFKIGAAFG 313 (704)
Q Consensus 234 g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~~t~lt~g~g~pGGiF~Psl~IGA~~G 313 (704)
.+++...+++.. ..... -.+..|++.+.+|.++|.+-|-=-|+.-+||++|
T Consensus 105 -----Ip~v~~~l~g~~--------------------~~~~~----~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig 155 (466)
T 3nd0_A 105 -----IPQIEGHLEGKL--------------------PLVWQ----RVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIG 155 (466)
T ss_dssp -----HHHHHHHTTSSS--------------------CCCHH----HHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHH
T ss_pred -----HHHHHHHHcCCC--------------------CCchH----HHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHH
Confidence 444544443210 00111 2346799999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCccCCCccCCcchHHHHHHHHHHHHHHhhh-hhHHHHHHHHH-hCCc----hhHHHHHHHHHHHHHH
Q psy6631 314 RMIGEIIFLRFPDGITHGKFIAPIIPGGYATVGAAAFSGAVTH-TISVSVIMFEM-TGQI----THIIPVMIAVLISNAV 387 (704)
Q Consensus 314 ~~~G~~~~~~~p~~~~~~~~~~~~~p~~yAlvGmaAf~aav~~-~is~~viv~El-TG~~----~~~lPimia~~is~~v 387 (704)
..++..+.. + ..+--.....|+||=++++-+ |+..++..+|. .+++ ..+.|.++++++|+.+
T Consensus 156 ~~l~~~~~~--~----------~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v 223 (466)
T 3nd0_A 156 QMTGGWFKA--T----------QENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATII 223 (466)
T ss_dssp HHHHHHTTC--C----------HHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHcCC--C----------hhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 999987531 0 123457888899998888888 89999999996 4455 2366999999999999
Q ss_pred Hhhc
Q psy6631 388 AALL 391 (704)
Q Consensus 388 a~~l 391 (704)
++.+
T Consensus 224 ~~~~ 227 (466)
T 3nd0_A 224 LRMI 227 (466)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 94
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.55 E-value=7e-09 Score=93.40 Aligned_cols=111 Identities=15% Similarity=0.063 Sum_probs=86.7
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCCC
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVSA 577 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~~ 577 (704)
+|+|+|++++.++++++++.|+.+.|.+ .+...+||+|+++.+|.++..+.........
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~G~it~~dl~~~~~~~~-------------------- 60 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVE-NAKGSSVVVKEGVRVGIVTTWDVLEAIAEGD-------------------- 60 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHH-HCCCEEEEEETTEEEEEEEHHHHHHHHHHTC--------------------
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHH-cCCCEEEEEeCCeeEEEEeHHHHHHHHhcCC--------------------
Confidence 6889999999999999999999999954 5567788888666788888887654321100
Q ss_pred CCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 578 SSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 578 ~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.. ...+..++|. ++..+.|++++.++...|...+.+.+ ||+|+ |+++|++|+
T Consensus 61 ---~~--~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l--~Vvd~-~~~~Gvit~ 113 (125)
T 1pbj_A 61 ---DL--AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRL--LVEED-DEIIGVISA 113 (125)
T ss_dssp ---CT--TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEE--EEEET-TEEEEEEEH
T ss_pred ---cc--cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEE--EEEEC-CEEEEEEEH
Confidence 00 0013455665 78889999999999999998888887 99999 999999998
No 95
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.54 E-value=2.6e-08 Score=91.34 Aligned_cols=114 Identities=15% Similarity=0.175 Sum_probs=88.3
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHH-hhhcCCCcccccccCchhhcCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRR-EERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~-~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
...+|+++|++++.++++++++.|+.+.|.+ ++...+||+|+ ++.+|.++..+. ........
T Consensus 6 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--------------- 69 (138)
T 2p9m_A 6 KNIKVKDVMTKNVITAKRHEGVVEAFEKMLK-YKISSLPVIDDENKVIGIVTTTDIGYNLIRDKY--------------- 69 (138)
T ss_dssp TTCBGGGTSBCSCCCEETTSBHHHHHHHHHH-HTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCC---------------
T ss_pred ccCCHHHhhcCCceEECCCCcHHHHHHHHHH-CCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcc---------------
Confidence 3568999999999999999999999999954 55778899974 667888888876 44322100
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhccccccccc-----CCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKN-----FSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~-----~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. .+.+..++|. ++..+.|++++.++...|...+ .+.+ ||+|++|+++|++|+
T Consensus 70 ---------~--~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l--~Vvd~~g~~~Giit~ 127 (138)
T 2p9m_A 70 ---------T--LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQL--PVVDKNNKLVGIISD 127 (138)
T ss_dssp ---------C--SSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEE--EEECTTSBEEEEEEH
T ss_pred ---------c--CCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEE--EEECCCCeEEEEEEH
Confidence 0 0013445565 7788899999999999999888 7776 999999999999998
No 96
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.53 E-value=1.3e-08 Score=96.54 Aligned_cols=120 Identities=18% Similarity=0.194 Sum_probs=89.7
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCC-CcccccccCchhhcCCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRR-PSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~-~sr~~v~~~~~~l~~~~~ 573 (704)
..+|+|+|++++.++.+++++.|+.+.|. ..+...+||+|+ ++.+|.++..++...... ..+.. .
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~-~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~--~---------- 70 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLME-ALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSA--Q---------- 70 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHH-HHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC----------------
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHH-HcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccc--c----------
Confidence 46899999999999999999999999995 455778899875 667899998887543210 00000 0
Q ss_pred CCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+. ... ...+..++|. ++.++.|++++.++...|...++..+ ||||+ |+++|+||+
T Consensus 71 ~~----~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~-g~lvGiit~ 126 (160)
T 2o16_A 71 GD----SLA--FETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCL--PVVAK-DVLVGIITD 126 (160)
T ss_dssp -----------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCE--EEEET-TEEEEEECH
T ss_pred cc----chh--cccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEE--EEEEC-CEEEEEEEH
Confidence 00 000 0113556676 78899999999999999999888887 99999 999999999
No 97
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.53 E-value=1.9e-08 Score=92.11 Aligned_cols=111 Identities=7% Similarity=-0.024 Sum_probs=87.6
Q ss_pred ccccccc---cCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh-hcCCCcccccccCchhhcCCCC
Q psy6631 498 YVEDFMV---RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE-RQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 498 ~V~dvM~---~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~-~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
+|+|+|+ +++.++++++++.|+.+.|.+ .+...+||+|+++.+|.+++.++.. ....... .
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~~~~--------~------ 71 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAA-DNIGALLVMKDEKLVGILTERDFSRKSYLLDKP--------V------ 71 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHH-HTCSEEEEEETTEEEEEEEHHHHHHHGGGSSSC--------G------
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHh-cCCCEEEEEECCEEEEEEehHHHHHHHHHcCCC--------c------
Confidence 7899999 899999999999999999954 5567788888667789888888653 2211000 0
Q ss_pred CCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|. ++..+.|++++.++...|...+.+.+ ||+| +|+++|++|+
T Consensus 72 -----------~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l--pVvd-~g~~~Giit~ 122 (135)
T 2rc3_A 72 -----------KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHL--PVLD-DGKVIGLLSI 122 (135)
T ss_dssp -----------GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEE--EEEE-TTEEEEEEEH
T ss_pred -----------ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEE--EEEe-CCEEEEEEEH
Confidence 0113556675 78889999999999999999888887 9999 7999999998
No 98
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.52 E-value=8.4e-09 Score=98.37 Aligned_cols=115 Identities=12% Similarity=0.140 Sum_probs=89.4
Q ss_pred ccccccccccc---CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 495 YNVYVEDFMVR---DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 495 ~~~~V~dvM~~---~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
...+|+|+|++ ++.++.+++++.|+.+.|.+ .+...+||+|+ ++.+|.++..++......... +..
T Consensus 22 ~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------~~~-- 91 (165)
T 3fhm_A 22 MATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHA-HKIGAVVVTDADGVVLGIFTERDLVKAVAGQGA-------ASL-- 91 (165)
T ss_dssp SSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGG-------GGG--
T ss_pred hhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHH-cCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCC-------ccc--
Confidence 45789999996 79999999999999999954 56778899885 567898888887543210000 000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. ++.++.|++++.++...|...+++.+ ||+|+ |+++|+||+
T Consensus 92 ---------------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~-g~~~Giit~ 141 (165)
T 3fhm_A 92 ---------------QQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHV--PVEEN-GRLAGIISI 141 (165)
T ss_dssp ---------------TSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEE--EEEET-TEEEEEEEH
T ss_pred ---------------cCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEE--EEEEC-CEEEEEEEH
Confidence 013556666 78889999999999999999888887 99999 999999998
No 99
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.52 E-value=3.4e-08 Score=95.95 Aligned_cols=116 Identities=14% Similarity=0.046 Sum_probs=90.2
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
...+|+|+|+++++++++++++.|+++.|.+ .+...+||+++ ++.+|.++..++........ . ..
T Consensus 7 ~~~~v~~im~~~~~~v~~~~~l~ea~~~~~~-~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~-----~---~~----- 72 (184)
T 1pvm_A 7 MFMRVEKIMNSNFKTVNWNTTVFDAVKIMNE-NHLYGLVVKDDNGNDVGLLSERSIIKRFIPRN-----K---KP----- 72 (184)
T ss_dssp CCCBGGGTSBTTCCEEETTCBHHHHHHHHHH-HTCCEEEEECTTSCEEEEEEHHHHHHHTGGGC-----C---CG-----
T ss_pred cccCHHHhcCCCCeEECCCCcHHHHHHHHHH-cCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcc-----c---Cc-----
Confidence 3468999999999999999999999999964 56778899874 66788888887654321100 0 00
Q ss_pred CCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|. ++..+.|++++.++...|...+.+.+ ||+|++|+++|+||+
T Consensus 73 -----------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~~Givt~ 124 (184)
T 1pvm_A 73 -----------DEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERC--AVVDDPGRVVGIVTL 124 (184)
T ss_dssp -----------GGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEE--EEECTTCCEEEEEEH
T ss_pred -----------ccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEE--EEEcCCCeEEEEEEH
Confidence 0013556666 77888999999999999999888887 999999999999998
No 100
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.52 E-value=5.5e-08 Score=91.45 Aligned_cols=126 Identities=13% Similarity=0.103 Sum_probs=92.0
Q ss_pred cccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 495 YNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 495 ~~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
...+|+|+|+ +++.++.+++++.|+.+.|. ..+...+||+|+ ++.+|.++..++........ .. .+...
T Consensus 13 ~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~-~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~----~~-~~~~~-- 84 (156)
T 3ctu_A 13 LLGQEETFLTPAKNLAVLIDTHNADHATLLLS-QMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHD----LS-QEIMA-- 84 (156)
T ss_dssp HHTTGGGGEEEGGGCCCEETTSBHHHHHHHHT-TCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHT----CC-HHHHT--
T ss_pred HHHHHHHHcCcccCceEECCCCCHHHHHHHHH-HCCCceEeEECCCCEEEEEEcHHHHHHHHHhcc----cc-ccccc--
Confidence 3468999999 78999999999999999994 567788999985 56689888888754331100 00 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH--HHHHHHHHh
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR--IRMAFEAIF 646 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr--~r~a~e~~~ 646 (704)
..+..++|. ++.++.|++++.++...|...+ . +||||++|+++|+||+ +-.++....
T Consensus 85 --------------~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~--lpVvd~~g~~~Giit~~dil~~l~~~~ 144 (156)
T 3ctu_A 85 --------------DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--F--LPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp --------------TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--E--EEEECTTSBEEEEEETTHHHHHHHHHS
T ss_pred --------------cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--e--EEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 013556776 7888999999999999888765 3 3999999999999999 444454433
No 101
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.52 E-value=6e-08 Score=91.04 Aligned_cols=118 Identities=11% Similarity=0.079 Sum_probs=89.3
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
...+|+|+|++ ++.++++++++.|+.+.|. ..+...+||+|+ ++.+|.++..++........+.+. +...
T Consensus 9 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~-~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~----~~~~-- 81 (157)
T 2emq_A 9 MQMTVKPFLIPADKVAHVQPGNYLDHALLVLT-KTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEF----ERLE-- 81 (157)
T ss_dssp -CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHH-HSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCG----GGGG--
T ss_pred hhCcHHhhccCCccceEECCCCcHHHHHHHHH-HCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccch----HHhc--
Confidence 45789999997 8999999999999999995 466778999985 677899998887654322111110 0000
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. ++..+.|++++.++...|...++ + ||||++|+++|+||+
T Consensus 82 --------------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l--~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 82 --------------TMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--V--CVENDDGYFAGIFTR 130 (157)
T ss_dssp --------------TCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--E--EEECSSSSEEEEEEH
T ss_pred --------------CCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--E--EEEcCCCeEEEEEEH
Confidence 013556666 78889999999999999988776 3 999999999999999
No 102
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.51 E-value=9.1e-09 Score=98.71 Aligned_cols=137 Identities=12% Similarity=0.093 Sum_probs=90.9
Q ss_pred cccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcC----CCcccccccCchhh
Q psy6631 496 NVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQR----RPSRFEVTPAPDLL 568 (704)
Q Consensus 496 ~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~----~~sr~~v~~~~~~l 568 (704)
..+|+|+|++ +++++++++++.|+.+.|.+ .+...+||+|+ ++.+|.+++.++..... +.......+ +.-
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~-~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~--~~~ 79 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVE-KKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFP--DVD 79 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHH-HTCSEEEEECTTCBEEEEEEHHHHTCC--------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHH-cCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccc--ccc
Confidence 3578999998 89999999999999999954 56778999985 56789999888753211 000000000 000
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 569 RGNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..-.............+..++|. ++.++.|++++.++...|...+++++ ||||++|+++|+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~vGiit~ 147 (180)
T 3sl7_A 80 STWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRL--PVVDADGKLIGILTR 147 (180)
T ss_dssp -CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEE--EEECTTCBEEEEEEH
T ss_pred chhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEE--EEECCCCeEEEEEEH
Confidence 00000000000000001124567777 78899999999999999999999887 999999999999999
No 103
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.51 E-value=1.4e-08 Score=95.51 Aligned_cols=112 Identities=12% Similarity=0.063 Sum_probs=88.8
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecc-cC--CCceEEeehHHHhhhcCCCcccccccCchhhc
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLV-ES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLR 569 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv-~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~ 569 (704)
...+|+++|++ ++.++++++++.|+++.|.+ .+...+||+ ++ ++.+|.++.+++........
T Consensus 18 ~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~-~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~------------ 84 (153)
T 3oco_A 18 NDKVASDVMVDRTSMSVVDVDETIADALLLYLE-EQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD------------ 84 (153)
T ss_dssp HHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHH-HCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT------------
T ss_pred CCCEeeeEecchhheEEEcCCCCHHHHHHHHHh-CCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC------------
Confidence 45789999996 89999999999999999954 556678888 43 56688888887654321000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. .+..++|.++.++.|++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 85 ~----------------~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~l--pVvd~~g~~vGivt~ 134 (153)
T 3oco_A 85 K----------------AKISTIMRDIVSVPENMKVPDVMEEMSAHRVPMA--IVIDEYGGTSGIITD 134 (153)
T ss_dssp T----------------SBGGGTCBCCEEEETTSBHHHHHHHHHHTTCSCE--EEECTTSCEEEEECH
T ss_pred C----------------CcHHHHhCCCeEECCCCCHHHHHHHHHHcCCcEE--EEEeCCCCEEEEeeH
Confidence 0 0344556677889999999999999999888887 999999999999999
No 104
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.49 E-value=1.6e-08 Score=95.28 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=87.8
Q ss_pred cccccccc------cCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 497 VYVEDFMV------RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 497 ~~V~dvM~------~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
.+|+|+|+ +++.++++++++.|+++.|.+ .+...+||+++++.+|.++..++........+.
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~V~~~~~~~Givt~~dl~~~~~~~~~~----------- 74 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAE-KGIGALLVVDGDDIAGIVTERDYARKVVLQERS----------- 74 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHH-HTCSEEEEESSSSEEEEEEHHHHHHHSGGGTCC-----------
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHH-cCCCEEEEeeCCEEEEEEEHHHHHHHHHhccCC-----------
Confidence 57999999 556999999999999999954 556788887777889999888865432110000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ...+..++|. ++..+.|++++.++...|...+++++ ||+| +|+++|++++
T Consensus 75 -----------~--~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l--pVvd-~g~~~Giit~ 126 (157)
T 4fry_A 75 -----------S--KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHL--PVLD-GGKLIGLISI 126 (157)
T ss_dssp -----------S--SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEE--EEEE-TTEEEEEEEH
T ss_pred -----------c--cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEE--EEEE-CCEEEEEEEH
Confidence 0 0113556666 78889999999999999999898887 9999 7999999998
No 105
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.48 E-value=9.2e-08 Score=78.94 Aligned_cols=66 Identities=15% Similarity=0.087 Sum_probs=55.2
Q ss_pred eEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCC-C--cccccccccccccccCc
Q psy6631 431 VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLP-S--SSGIYNVYVEDFMVRDV 507 (704)
Q Consensus 431 v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~-~--~~~~~~~~V~dvM~~~v 507 (704)
++++.+++++.||.++|.++ +.+++||+|++ +++|+++++|+++. . .....+.+|+|+|++++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~-~i~~~~V~d~~-------------~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~ 67 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRN-KAGSAVVMEGD-------------EILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHT-TCSEEEEEETT-------------EEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CEEECCCCcHHHHHHHHHHc-CCCEEEEEECC-------------EEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCC
Confidence 67899999999999999999 89999999854 89999999999632 2 22345679999999998
Q ss_pred eEE
Q psy6631 508 KYI 510 (704)
Q Consensus 508 ~tV 510 (704)
.+|
T Consensus 68 iTV 70 (70)
T 3ghd_A 68 VKI 70 (70)
T ss_dssp TCC
T ss_pred eEC
Confidence 764
No 106
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.48 E-value=4.2e-08 Score=92.69 Aligned_cols=118 Identities=11% Similarity=0.063 Sum_probs=89.3
Q ss_pred ccccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 495 YNVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 495 ~~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
...+|+|+|++ ++.++++++++.|+++.|.+ .+...+||+|+ ++.+|.++..++........+.+...
T Consensus 12 ~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~-~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~-------- 82 (159)
T 1yav_A 12 LEATVGQFMIEADKVAHVQVGNNLEHALLVLTK-TGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEK-------- 82 (159)
T ss_dssp TTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHH-HCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGG--------
T ss_pred hHhhHHHHhCCccceEEECCCCcHHHHHHHHHh-CCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhh--------
Confidence 45789999998 89999999999999999954 56778899975 56789999888765432211110000
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.. ..+..++|. ++..+.|++++.++...|...++ + ||||++|+++|+||+
T Consensus 83 ----------~~--~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l--pVvd~~g~~vGiit~ 133 (159)
T 1yav_A 83 ----------LD--QITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--V--CVENDEQVFEGIFTR 133 (159)
T ss_dssp ----------TT--TSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--E--EEECTTCBEEEEEEH
T ss_pred ----------hc--cCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--E--EEEeCCCeEEEEEEH
Confidence 00 113556676 77888999999999999887766 3 999999999999999
No 107
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.46 E-value=3.4e-08 Score=92.38 Aligned_cols=113 Identities=9% Similarity=0.022 Sum_probs=89.1
Q ss_pred cccccccccc--CceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 496 NVYVEDFMVR--DVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 496 ~~~V~dvM~~--~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
..+|+|+|++ +++++++++++.|+.+.|.+ .+...+||+|+ ++.+|.++..++.........
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-------------- 91 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITR-KNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVD-------------- 91 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHH-HTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSC--------------
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHh-CCCcEEEEECCCCcEEEEecHHHHHHHHhcCCC--------------
Confidence 3589999999 99999999999999999954 56778999985 567888888886553321100
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.. +.+..++|. ++.++.|++++.++...|...+++.+ ||+|+. +++|+||+
T Consensus 92 ---------~~--~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~-~~~Giit~ 143 (149)
T 3k2v_A 92 ---------MR--DASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCV--LVADGD-HLLGVVHM 143 (149)
T ss_dssp ---------CT--TCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEE--EEEETT-EEEEEEEH
T ss_pred ---------cc--cCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEE--EEecCC-EEEEEEEH
Confidence 00 113556676 77889999999999999999888887 999987 99999987
No 108
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.41 E-value=1e-07 Score=87.46 Aligned_cols=113 Identities=4% Similarity=0.000 Sum_probs=88.2
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHh-hhcCCCcccccccCchhhcCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRRE-ERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~-~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
...+|+|+|++++.++++++++.|+.+.|.+ .+...+||+| +++.+|.++..++. ....... .
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~-----~--------- 69 (138)
T 2yzi_A 5 MKAPIKVYMTKKLLGVKPSTSVQEASRLMME-FDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGL-----P--------- 69 (138)
T ss_dssp TTSBGGGTCBCCCCEECTTSBHHHHHHHHHH-HTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCC-----C---------
T ss_pred hhhhHHHHhcCCCeEECCCCcHHHHHHHHHH-cCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCC-----c---------
Confidence 3568999999999999999999999999954 5577889998 56778888888764 2221100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|. ++..+.|++++.++...|...++++ + |||++|+++|++|+
T Consensus 70 ------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~--l-Vvd~~g~~~Giit~ 120 (138)
T 2yzi_A 70 ------------YDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKH--I-LIEEEGKIVGIFTL 120 (138)
T ss_dssp ------------TTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSE--E-EEEETTEEEEEEEH
T ss_pred ------------ccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCE--E-EECCCCCEEEEEEH
Confidence 0113556675 7888999999999999999888866 3 89989999999998
No 109
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.40 E-value=1.1e-07 Score=94.87 Aligned_cols=115 Identities=12% Similarity=0.059 Sum_probs=90.3
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHG 574 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~ 574 (704)
..+++++|.+++.++.+++++.|+.+.|. ..+...+||+|+ ++.+|.++++++.....
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~-~~~~~~~pVvd~~~~l~Givt~~dl~~~~~-------------------- 70 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMR-QYQTNECIVKDREGHFRGVVNKEDLLDLDL-------------------- 70 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHH-HTTSSEEEEECTTSBEEEEEEGGGGTTSCT--------------------
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHH-HCCCCEEEEEcCCCEEEEEEEHHHHHhhcC--------------------
Confidence 45789999999999999999999999995 466778999984 55677776666332110
Q ss_pred CCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH--HHHHHHH
Q psy6631 575 VSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR--IRMAFEA 644 (704)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr--~r~a~e~ 644 (704)
+.+..++|+ ++.++.|++++.++...|...+++++ ||+|++|+++|++|+ +..++..
T Consensus 71 -----------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 71 -----------DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYL--PVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp -----------TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEE--EEECTTCBEEEEEEHHHHHHHHHH
T ss_pred -----------CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEE--EEEcCCCEEEEEEEHHHHHHHHHH
Confidence 013566776 78899999999999999999888887 999999999999998 4444443
No 110
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=98.40 E-value=2.5e-05 Score=86.81 Aligned_cols=185 Identities=15% Similarity=0.124 Sum_probs=124.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcch---hHHHHH----HHHHHHHHH---hhhhhccc
Q psy6631 162 DPQELTVFALIGVVCGFGGAGYVWSHRQYVLFMRRNKKMNAFLQKNR---FLYPGI----VVLLATSVS---FPLGLGKY 231 (704)
Q Consensus 162 ~~~el~~~illGi~~Gl~g~lF~~~~~~~~~~~r~~~~~~~~l~~~~---~l~p~l----~gllvg~l~---fP~~~G~~ 231 (704)
...-+...+++|+++|+++.+|.++..+...++... ... ...++ |+.+.+ ++++++.+. .|..-|.+
T Consensus 17 ~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsG 93 (446)
T 4ene_A 17 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGA--LVH-TADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSG 93 (446)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH-TSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHh-hcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 356677889999999999999999998887654422 111 11112 222222 223333221 24443432
Q ss_pred cCCCCCcHHHHHHhhhcCccCCCCcchhhHhhhhhcccCCcchHHHHHHHHHHHHHHHHHHhhCCccccccchhhHHHHH
Q psy6631 232 MAGDLNTHDQLSSLFSNFTWTKGHFTVEEQEVLKHWTTRNTDVFVSLACFMLYTYIFSIIASTIPVPSGSFIPVFKIGAA 311 (704)
Q Consensus 232 ~~g~l~~~~~i~~lf~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Ll~~~~~K~~~t~lt~g~g~pGGiF~Psl~IGA~ 311 (704)
.+++...+++. . ....+ -....|++.+.+|.++|.+-|-=-|+.-+||+
T Consensus 94 -------ip~v~~~l~~~----~----------------~~~~~----r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ 142 (446)
T 4ene_A 94 -------IPEIEGALEDQ----R----------------PVRWW----RVLPVKFFGGLGTLGGGMVLGREGPTVQIGGN 142 (446)
T ss_dssp -------HHHHHHHHHTC----S----------------CCCHH----HHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHH
T ss_pred -------HHHHHHHHhCC----C----------------ccchH----HHHHHHHHHHHHHHhcCCccCCcchHHHHHHH
Confidence 34454444321 0 00111 13467999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCccCCCccCCcchH-HHHHHHHHHHHHHhhh-hhHHHHHHHHHhC-Cc----hhHHHHHHHHHHH
Q psy6631 312 FGRMIGEIIFLRFPDGITHGKFIAPIIPG-GYATVGAAAFSGAVTH-TISVSVIMFEMTG-QI----THIIPVMIAVLIS 384 (704)
Q Consensus 312 ~G~~~G~~~~~~~p~~~~~~~~~~~~~p~-~yAlvGmaAf~aav~~-~is~~viv~ElTG-~~----~~~lPimia~~is 384 (704)
+|..++..+.. + ..+-- .....|+||=++++-+ |+..++..+|... ++ ..+.|.++++++|
T Consensus 143 ig~~~~~~~~~--~----------~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a 210 (446)
T 4ene_A 143 IGRMVLDIFRL--K----------GDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMS 210 (446)
T ss_dssp HHHHHHHHTTC--C----------SHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCC--C----------HHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 99998886431 1 12332 6788899998888888 8999999999754 33 3478999999999
Q ss_pred HHHHhhcC
Q psy6631 385 NAVAALLQ 392 (704)
Q Consensus 385 ~~va~~l~ 392 (704)
+.+++.+.
T Consensus 211 ~~v~~~~~ 218 (446)
T 4ene_A 211 TIMYRIFN 218 (446)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHc
Confidence 99998764
No 111
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.39 E-value=2.3e-08 Score=91.19 Aligned_cols=113 Identities=11% Similarity=0.121 Sum_probs=87.0
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc-CCCceEEeehHHHhh-hcCCCcccccccCchhhcCCCC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE-SSGKFEQMEIKRREE-RQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~-~~~~~~~i~~~~~~~-~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
..+|+|+|++++.++++++++.|+.+.|.+ .+...+||+| +++.+|.++..++.. .......
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~--------------- 70 (133)
T 1y5h_A 7 MTTARDIMNAGVTCVGEHETLTAAAQYMRE-HDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLD--------------- 70 (133)
T ss_dssp -CCHHHHSEETCCCEETTSBHHHHHHHHHH-HTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTCC---------------
T ss_pred hcCHHHHhcCCceEeCCCCCHHHHHHHHHH-hCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCCC---------------
Confidence 358899999999999999999999999954 5677889885 466788888887642 2210000
Q ss_pred CCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
....+..++|. ++..+.|++++.++...|...+.+.+ ||+|+ |+++|++|+
T Consensus 71 ----------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l--~Vvd~-g~~~Giit~ 122 (133)
T 1y5h_A 71 ----------PNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRV--PVISE-HRLVGIVTE 122 (133)
T ss_dssp ----------TTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEE--EEEET-TEEEEEEEH
T ss_pred ----------ccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEE--EEEEC-CEEEEEEEH
Confidence 00113556665 78889999999999999999888887 99998 999999998
No 112
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.39 E-value=1.8e-07 Score=88.13 Aligned_cols=118 Identities=15% Similarity=0.200 Sum_probs=86.9
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC---CCceEEeehHHHhhhcCCCcccccccCchhhcCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES---SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGN 571 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~---~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~ 571 (704)
...+|+|+|++++.++++++++.|+.+.|. ..+...+||+|+ ++.+|.+++.++........... .+ .
T Consensus 11 ~~~~v~dim~~~~~~v~~~~~~~~a~~~~~-~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~-~~------~- 81 (164)
T 2pfi_A 11 HHVRVEHFMNHSITTLAKDTPLEEVVKVVT-STDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSR-AP------G- 81 (164)
T ss_dssp CSCBHHHHCBCCCCCEETTCBHHHHHHHHH-TCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC--------------C-
T ss_pred cCCCHHHHcCCCCeEECCCCcHHHHHHHHH-hCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhcccc-CC------c-
Confidence 356899999999999999999999999995 567888999984 56789999888754331110000 00 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc-------CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 572 PHGVSASSDNIPRTENLDGPQFC-------PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|. .+.++.|++++.++...|...+.+.+ ||+| +|+++|+||+
T Consensus 82 -------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l--pVvd-~g~l~Giit~ 138 (164)
T 2pfi_A 82 -------------HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSL--FVTS-RGRAVGCVSW 138 (164)
T ss_dssp -------------CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEE--EEEE-TTEEEEEEEH
T ss_pred -------------ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEE--EEEE-CCEEEEEEEH
Confidence 0001222222 26788999999999999999888887 9999 7999999999
No 113
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.39 E-value=1.1e-07 Score=91.95 Aligned_cols=112 Identities=9% Similarity=0.066 Sum_probs=87.5
Q ss_pred ccccccccccc--cCceEEeCCCCHHHHHHHhHhcCCCceeecccC--CCceEEeehHHHhhhcCCCcccccccCchhhc
Q psy6631 494 IYNVYVEDFMV--RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES--SGKFEQMEIKRREERQRRPSRFEVTPAPDLLR 569 (704)
Q Consensus 494 ~~~~~V~dvM~--~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~--~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~ 569 (704)
....+|+++|+ +++.++.+++++.|+++.|. ..+...+||+++ ++.+|.++.+++....... +
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~-~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~------~------ 99 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLT-AAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE------G------ 99 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHH-HSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH------S------
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHH-hCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC------C------
Confidence 34578999997 46899999999999999995 466778899875 4678988888865432100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcccCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFCPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. .+.. .+.++.++.|++++.++...|...+.+.+ ||+|++|+++|+||+
T Consensus 100 ~----------------~~v~-~~~~~~~v~~~~~l~~al~~m~~~~~~~~--~Vvde~g~lvGiIT~ 148 (173)
T 3ocm_A 100 R----------------VRRN-RLRDPIIVHESIGILRLMDTLKRSRGQLV--LVADEFGAIEGLVTP 148 (173)
T ss_dssp S----------------CCGG-GSBCCCEECGGGCHHHHHHHHHHSTTCCE--EEECTTCCEEEEECH
T ss_pred c----------------chhH-hcCCCeEECCCCcHHHHHHHHHHcCCeEE--EEEeCCCCEEEEEeH
Confidence 0 0223 34477888999999999999999888776 999999999999998
No 114
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.38 E-value=4.3e-08 Score=110.35 Aligned_cols=145 Identities=15% Similarity=0.189 Sum_probs=24.2
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHH-------HHHHHhh-----cCC--ChHHHHHHHhcCCCCCCCCCCCccccccccc
Q psy6631 359 SVSVIMFEMTGQITHIIPVMIAVLI-------SNAVAAL-----LQP--SLYDSIILIKKLPYLPDLLPSSSGIYNVYVE 424 (704)
Q Consensus 359 s~~viv~ElTG~~~~~lPimia~~i-------s~~va~~-----l~~--siy~~~l~~r~~p~l~~~~~~~~~l~~~~V~ 424 (704)
..+.+.+|+|+++.+.+|+|.+.+. +..+++. ++. +.-+..-+.+ .-.+.+
T Consensus 32 ~~v~l~t~lt~~l~l~~PIi~a~m~~vt~~ela~ava~~GglG~i~~~~~~e~~~~~I~---------------~v~~~~ 96 (486)
T 2cu0_A 32 KDVDVSTRITPNVKLNIPILSAAMDTVTEWEMAVAMAREGGLGVIHRNMGIEEQVEQVK---------------RVKRAE 96 (486)
T ss_dssp TTCBCCEEEETTEEESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHH---------------HHHTCC
T ss_pred ceEEEEeeecCCcccccceEEccceeecHHHHHHHHHhcCCceeecCCCCHHHHHHHHH---------------hhcchh
Confidence 3455778999999998898876542 2222221 111 1111111111 112457
Q ss_pred cccccceEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCcccccccccccccc
Q psy6631 425 DFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSSSGIYNVYVEDFMV 504 (704)
Q Consensus 425 diM~~~v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~~~~~~~~V~dvM~ 504 (704)
|.|.+++.++.++++++++++.+.++ +++.+||+|++ +++|+|+.+|++. ..+.+++++|+
T Consensus 97 ~~m~~~~~~v~~~~tv~ea~~~~~~~-~~~~~pVvd~~-------------~lvGivt~~Dl~~-----~~~~~v~~im~ 157 (486)
T 2cu0_A 97 RLIVEDVITIAPDETVDFALFLMEKH-GIDGLPVVEDE-------------KVVGIITKKDIAA-----REGKLVKELMT 157 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hccccCceEECCCCCHHHHHHHHHHc-CCcEEEEEECC-------------EEEEEEEHHHhcc-----CCCCCHHHHcc
Confidence 78999999999999999999999988 79999999754 7999999999976 24678999999
Q ss_pred cCceEEeCCCCHHHHHHHhHhcCCCceeecccCC
Q psy6631 505 RDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS 538 (704)
Q Consensus 505 ~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~ 538 (704)
+++.++++++++.|+++.|. ..+...+||+|++
T Consensus 158 ~~~~~v~~~~~l~eal~~m~-~~~~~~lpVVde~ 190 (486)
T 2cu0_A 158 KEVITVPESIEVEEALKIMI-ENRIDRLPVVDER 190 (486)
T ss_dssp ----------------------------------
T ss_pred CCCeEECCcCcHHHHHHHHH-HcCCCEEEEEecC
Confidence 99999999999999999994 5667788888863
No 115
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.33 E-value=9.8e-08 Score=96.97 Aligned_cols=56 Identities=11% Similarity=0.269 Sum_probs=48.9
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhh
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREE 551 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~ 551 (704)
...+|+|+|+++++++++++++.|+++.|. .+++..+||+|+ ++.+|.+++.+...
T Consensus 5 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~-~~~~~~lpVvd~~~~l~Giit~~di~~ 61 (245)
T 3l2b_A 5 VKLKVEDLEMDKIAPLAPEVSLKMAWNIMR-DKNLKSIPVADGNNHLLGMLSTSNITA 61 (245)
T ss_dssp CCCBGGGSCCBCCCCBCTTCBHHHHHHHHH-HTTCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred ccCcHHHhcCCCCcEECCCCcHHHHHHHHH-HcCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 356899999999999999999999999995 577889999986 67799999988764
No 116
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.30 E-value=1.4e-07 Score=86.74 Aligned_cols=115 Identities=10% Similarity=0.076 Sum_probs=85.3
Q ss_pred ccccccc---ccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCc-ccccccCchhhc
Q psy6631 495 YNVYVED---FMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPS-RFEVTPAPDLLR 569 (704)
Q Consensus 495 ~~~~V~d---vM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~s-r~~v~~~~~~l~ 569 (704)
...++++ +|.+++.++++++++.|+++.|.+ .+...+||+|+ ++.+|.++..++........ ...-.
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~-~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~------- 77 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQ-GRVSSVPIIDENGYLINVYEAYDVLGLIKGGIYNDLSL------- 77 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHH-HTCSEEEEECTTCBEEEEEEHHHHHHHHHTC----CCS-------
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHH-cCcceeeEEcCCCcEEEEEcHHHHHHHhcccccccCCc-------
Confidence 3456777 899999999999999999999954 56778899874 56789888888754321100 00000
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccc-------CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFC-------PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+..++|. ++.++.|++++.++...|...+.+.+ ||+|++|+++|++|+
T Consensus 78 ------------------~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l--~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 78 ------------------SVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRF--FVVDDVGRLVGVLTL 132 (144)
T ss_dssp ------------------BHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred ------------------cHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEE--EEECCCCCEEEEEEH
Confidence 1223332 46788999999999999998888887 999999999999998
No 117
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.29 E-value=1.1e-07 Score=99.62 Aligned_cols=110 Identities=12% Similarity=0.088 Sum_probs=88.5
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhc----CCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhc
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKEN----RSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLR 569 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~----~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~ 569 (704)
...+|+++|+++++++++++++.++++.|.+. ++...+||+++ ++.+|.++.+++.... +
T Consensus 135 ~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~---------~------ 199 (286)
T 2oux_A 135 EDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND---------D------ 199 (286)
T ss_dssp CTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC---------T------
T ss_pred ChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC---------C------
Confidence 45689999999999999999999999999653 26677899985 5667877777643210 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. ++.++.|++++.++...|...++..+ ||||++|+++|+||+
T Consensus 200 ----------------~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~l--pVVd~~g~lvGiIT~ 250 (286)
T 2oux_A 200 ----------------DTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAV--PVTDYDDHLLGIVTV 250 (286)
T ss_dssp ----------------TSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEE--EEECTTCBEEEEEEH
T ss_pred ----------------CCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEE--EEEcCCCeEEEEEEH
Confidence 013556675 78889999999999999999888877 999999999999999
No 118
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.28 E-value=4.2e-07 Score=94.48 Aligned_cols=109 Identities=10% Similarity=0.102 Sum_probs=88.8
Q ss_pred ccccccccccCceEEeCCCCHHHHHHHhHhcC----CCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 496 NVYVEDFMVRDVKYIWNNMTYRDLKNLLKENR----SLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 496 ~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~----rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
..+|+++|++++.++.+++++.++++.|.+.. +...+||+++ ++.+|.++.+++.... +
T Consensus 134 ~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~---------~------- 197 (278)
T 2yvy_A 134 EDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVAD---------P------- 197 (278)
T ss_dssp TTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHSC---------T-------
T ss_pred cchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcCC---------C-------
Confidence 46789999999999999999999999996532 6778999985 5678877777643210 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|. ++.++.|++++.++...|...+++.+ ||||++|+++|+||+
T Consensus 198 ---------------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~lvGivT~ 248 (278)
T 2yvy_A 198 ---------------RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVL--PVVDEEGRLVGIVTV 248 (278)
T ss_dssp ---------------TCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred ---------------CCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEE--EEEeCCCeEEEEEEH
Confidence 014667775 88899999999999999998888776 999999999999998
No 119
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.25 E-value=3.6e-07 Score=85.64 Aligned_cols=114 Identities=8% Similarity=0.055 Sum_probs=85.6
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCC
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
...+|+++ +++.++.+++++.|+.+.|.+ .+...+||+|+ ++.+|.++..++......... . .
T Consensus 21 ~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~-~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~~----~---~------ 84 (152)
T 2uv4_A 21 EELQIGTY--ANIAMVRTTTPVYVALGIFVQ-HRVSALPVVDEKGRVVDIYSKFDVINLAAEKTY----N---N------ 84 (152)
T ss_dssp HHHTCSBC--SSCCCEETTCBHHHHHHHHHH-HCCSEEEEECTTSBEEEEEEHHHHHHHHHCSSC----C---C------
T ss_pred HHccCCcc--CCceEeCCCCcHHHHHHHHHH-cCCceEeEECCCCcEEEEEeHHHHHHHhcchhh----h---h------
Confidence 44677887 789999999999999999954 56778999985 567899988887543211100 0 0
Q ss_pred CCCCCCCCCCCCCCCCCCcc-------cCccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQF-------CPVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~-------~~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ..+..++| .++..+.|++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 85 ------~-----~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVvd~~g~~vGiit~ 142 (152)
T 2uv4_A 85 ------L-----DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRL--VVVDENDVVKGIVSL 142 (152)
T ss_dssp ------T-----TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred ------h-----cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEE--EEECCCCeEEEEEEH
Confidence 0 00123333 377889999999999999998888877 999999999999998
No 120
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.24 E-value=1.6e-07 Score=90.38 Aligned_cols=135 Identities=10% Similarity=0.028 Sum_probs=92.9
Q ss_pred cccccccccccC----ceEE--eCCCCHHHHHHHhHhcCCCceeecc--c-CCCceEEeehHHHhhhcCCC--ccccccc
Q psy6631 495 YNVYVEDFMVRD----VKYI--WNNMTYRDLKNLLKENRSLRVFPLV--E-SSGKFEQMEIKRREERQRRP--SRFEVTP 563 (704)
Q Consensus 495 ~~~~V~dvM~~~----v~tV--~~d~sl~ea~~~m~~~~rl~Vvpvv--~-~~~~~~~i~~~~~~~~~~~~--sr~~v~~ 563 (704)
...+|+|+|+++ +.++ .+++++.|+.+.|. ..+...+||+ | +++.+|.++..++....... ....+..
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~-~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIIS-ETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHH-HCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHHHHHHHHH-hcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 467899999987 7888 99999999999995 4667789998 4 46778999998875432110 0001111
Q ss_pred Cc-hhhcCCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 564 AP-DLLRGNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 564 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.. ..+.... .+ ..... ....+..++|. ++..+.|++++.++...|...+.+.+ ||+| +|+++|+||+
T Consensus 88 ~~~~~~~~~~-~~-~~~~~--~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l--~Vvd-~g~~vGiit~ 156 (185)
T 2j9l_A 88 TSIIYFTEHS-PP-LPPYT--PPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQC--LVTH-NGRLLGIITK 156 (185)
T ss_dssp TCEEECSSSC-CC-CCTTC--CCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEE--EEEE-TTEEEEEEEH
T ss_pred cceeecccCC-cc-ccccc--ccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEE--EEEE-CCEEEEEEEH
Confidence 00 0000000 00 00000 11125677886 88999999999999999999988887 9999 8999999999
No 121
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.16 E-value=8.7e-07 Score=71.71 Aligned_cols=65 Identities=14% Similarity=0.060 Sum_probs=54.4
Q ss_pred eEEecCCCCHHHHHHHHHhcCCccEEEeecCccccccCCCCcCCeeEEEeecCCCCCCCCc---ccccccccccccccCc
Q psy6631 431 VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSVAALLQPSLYDSIILIKKLPYLPDLLPSS---SGIYNVYVEDFMVRDV 507 (704)
Q Consensus 431 v~~v~~~~tl~ea~~~l~~~~~~~~~PVVd~~~~~~~~p~~~~~~~LvG~Is~~dll~~~~---~~~~~~~V~dvM~~~v 507 (704)
+.++.++++++++++.|.++ +++.+||+|++ +++|+|+.+|++.... ......+|+++|++++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~-~~~~~pV~d~~-------------~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 67 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRN-KAGSAVVMEGD-------------EILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNP 67 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHT-TCSEEEEEETT-------------EEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECT
T ss_pred CeEECCCCcHHHHHHHHHHc-CCCEEEEEECC-------------EEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCC
Confidence 57899999999999999998 89999999854 8999999999975422 1245788999999887
Q ss_pred eE
Q psy6631 508 KY 509 (704)
Q Consensus 508 ~t 509 (704)
.+
T Consensus 68 ~~ 69 (70)
T 3fio_A 68 VK 69 (70)
T ss_dssp TC
T ss_pred eE
Confidence 65
No 122
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.04 E-value=8.1e-07 Score=99.59 Aligned_cols=110 Identities=10% Similarity=0.100 Sum_probs=89.0
Q ss_pred cccccccccccCceEEeCCCCHHHHHHHhHhc----CCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhc
Q psy6631 495 YNVYVEDFMVRDVKYIWNNMTYRDLKNLLKEN----RSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLR 569 (704)
Q Consensus 495 ~~~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~----~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~ 569 (704)
.+.+++++|++++.++++++++.|+.+.|.+. ++...+||+|+ ++.+|.++.++....
T Consensus 153 ~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~----------------- 215 (473)
T 2zy9_A 153 EEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----------------- 215 (473)
T ss_dssp CTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS-----------------
T ss_pred CCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC-----------------
Confidence 35688999999999999999999999999653 25678888875 566787777764321
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 570 GNPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
.+ +.+..++|+ ++.+++|++++.++.+.|...++..+ ||||++|+++|+||+
T Consensus 216 -~~-------------~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~l--pVVDe~g~lvGiIT~ 268 (473)
T 2zy9_A 216 -DP-------------RTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVL--PVVDEEGRLVGIVTV 268 (473)
T ss_dssp -CT-------------TSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred -CC-------------CCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEE--EEEcCCCEEEEEEeh
Confidence 00 014566775 88889999999999999999888877 999999999999999
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.00 E-value=9.3e-07 Score=100.41 Aligned_cols=114 Identities=7% Similarity=0.069 Sum_probs=88.4
Q ss_pred ccccccccccccCceEEeCC-CCHHHHHHHhHhcCCCceeeccc--CCCceEEeehHHHhhhcCCCcccccccCchhhcC
Q psy6631 494 IYNVYVEDFMVRDVKYIWNN-MTYRDLKNLLKENRSLRVFPLVE--SSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRG 570 (704)
Q Consensus 494 ~~~~~V~dvM~~~v~tV~~d-~sl~ea~~~m~~~~rl~Vvpvv~--~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~ 570 (704)
+...+|+|+|++++.++.++ +++.|+++.|. ..+...+||+| +++.+|.++++++...... +.
T Consensus 381 l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~-~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~-------------~~ 446 (527)
T 3pc3_A 381 WWSLAIAELELPAPPVILKSDATVGEAIALMK-KHRVDQLPVVDQDDGSVLGVVGQETLITQIVS-------------MN 446 (527)
T ss_dssp TTTSBGGGGCCCCCSCCEETTCBHHHHHHHHH-HHTCSEEEEECTTTCCEEEEEEHHHHHHHHHH-------------HC
T ss_pred ccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHH-HcCCCeEEEEECCCCEEEEEEEHHHHHHHHHh-------------cc
Confidence 34689999999999999999 99999999995 46677889988 4677898888886543210 00
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCC----CCCcchHHHH
Q psy6631 571 NPHGVSASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTP----YTTVTGAESR 637 (704)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~----~g~l~G~vtr 637 (704)
. . ...+..++|+ ++.++.|++++.++...|...++ .||||+ +|+++|+||+
T Consensus 447 ~------~------~~~~V~~im~~~~~~v~~~~~l~~a~~~m~~~~~----~pVVd~~~~~~g~lvGIVT~ 502 (527)
T 3pc3_A 447 R------Q------QSDPAIKALNKRVIRLNESEILGKLARVLEVDPS----VLILGKNPAGKVELKALATK 502 (527)
T ss_dssp C------C------TTSBGGGGEETTCCEEETTSBHHHHHHHHTTCSE----EEEEEECSSSCEEEEEEEEH
T ss_pred C------c------CCCcHHHHhcCCCeEECCCCcHHHHHHHHhhCCE----EEEEeCCcccCCeEEEEEEH
Confidence 0 0 0114667787 88899999999999998876655 299999 5999999999
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.81 E-value=3.2e-06 Score=95.20 Aligned_cols=108 Identities=12% Similarity=0.130 Sum_probs=1.6
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCC
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGV 575 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~ 575 (704)
..++++|+++++++.+++++.|+++.|. ..+...+||+|+ ++.+|.++++++. ...+
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~-~~~~~~~pVvd~~~~lvGivt~~Dl~------------~~~~--------- 152 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMA-EYKIGGLPVVDEEGRLVGLLTNRDVR------------FEKN--------- 152 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHH-HcCceEEEEEcCCCEEEEEEEHHHHH------------hhcC---------
Confidence 3568899999999999999999999995 466778888885 4556655555533 2000
Q ss_pred CCCCCCCCCCCCCCCCccc---CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 576 SASSDNIPRTENLDGPQFC---PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~---~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|+ ++.++.|++++.++...|...++..+ ||||++|+++|+||+
T Consensus 153 ---------~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~l--pVVd~~g~lvGiIt~ 206 (494)
T 1vrd_A 153 ---------LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKL--PLVSKDNKLVGLITI 206 (494)
T ss_dssp -----------------------------------------------------------------
T ss_pred ---------CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEE--EEEcCCCeEEEEEEH
Confidence 0013556666 67888999999999999999988887 999999999999999
No 125
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.74 E-value=2.6e-06 Score=96.23 Aligned_cols=108 Identities=7% Similarity=0.014 Sum_probs=2.3
Q ss_pred ccccc-cccCceEEeCCCCHHHHHHHhHhcCCCceeecccCC----CceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 498 YVEDF-MVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS----GKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 498 ~V~dv-M~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~----~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
...+. |++++.++++++++.|+.+.|. ..+...+||+|++ +.+|.+++++ +... ..
T Consensus 97 ~~~e~gM~~~~~~v~~~~tv~eal~~m~-~~~~s~~pVvd~~~~~g~lvGiVt~~D------------l~~~----~~-- 157 (503)
T 1me8_A 97 KNFKAGFVVSDSNVKPDQTFADVLAISQ-RTTHNTVAVTDDGTPHGVLLGLVTQRD------------YPID----LT-- 157 (503)
T ss_dssp HTTTC---------------------------------------------------------------------------
T ss_pred hhcccCcccCCeEECCCCcHHHHHHHHH-HcCceEEEEEECCCcCCeEEEEEEHHH------------HHhh----hc--
Confidence 33455 9999999999999999999995 4666778888763 4455555544 3321 00
Q ss_pred CCCCCCCCCCCCCCCCCCCccc-C--ccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC-P--VFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~-~--v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ...+..++|+ . +.++.|++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 158 -~----------~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~l--pVVDe~g~lvGiIT~ 212 (503)
T 1me8_A 158 -Q----------TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNAL--PIIDDDQHLRYIVFR 212 (503)
T ss_dssp --------------------------------------------------------------------
T ss_pred -c----------ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEE--EEEcCCCeEEEEEEe
Confidence 0 0114667787 4 8999999999999999999998887 999999999999999
No 126
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.71 E-value=6.9e-06 Score=92.55 Aligned_cols=108 Identities=9% Similarity=0.006 Sum_probs=78.7
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC-CCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCC
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES-SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGV 575 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~-~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~ 575 (704)
..++++|++++.++++++++.|+.+.|. ..+...+||+|+ ++.+|.++.+++.... .
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~-~~~~s~~PVvd~~~~lvGiVt~rDL~~~~---------~------------ 146 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTH-YHGFAGFPVVTENNELVGIITGRDVRFVT---------D------------ 146 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHT-SSCCCEEEEECSSSBEEEEEEHHHHTTCC---------C------------
T ss_pred cccccccccCceEECCCCCHHHHHHHHH-HcCCcEEEEEccCCEEEEEEEHHHHhhcc---------c------------
Confidence 4567889999999999999999999994 566778999985 5678888888753100 0
Q ss_pred CCCCCCCCCCCCCCCCccc---CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 576 SASSDNIPRTENLDGPQFC---PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~---~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
...+..++|+ ++.+..+.+++.++...|...+++.+ ||||++|+++|+||+
T Consensus 147 ---------~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~l--pVVDe~G~l~GiIT~ 200 (496)
T 4fxs_A 147 ---------LTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKI--LVVNDEFQLKGMITA 200 (496)
T ss_dssp ---------TTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCE--EEECTTSBCCEEECC
T ss_pred ---------CCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEE--EEEcCCCCEEEeehH
Confidence 0013556676 58889999999999999999888887 999999999999998
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.70 E-value=7e-06 Score=92.90 Aligned_cols=110 Identities=10% Similarity=0.079 Sum_probs=58.3
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC----CCceEEeehHHHhhhcCCCcccccccCchhhcCCC
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES----SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNP 572 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~----~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~ 572 (704)
.+++++|.+++.++.+++++.|+.+.|. ..+...+||+|+ ++.+|.+++++ +....+ .
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~-~~~~~~~pVvd~~~~~~~lvGiVt~~D------------l~~~~~---~-- 169 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKM-RHGFSGIPITETGTMGSKLVGIVTSRD------------IDFLAE---K-- 169 (514)
T ss_dssp HTCCTTSCSSCCCCCC------------------CEESCC--------CCEECTTT------------TC----------
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHH-hcCCCEEEEEeCCCcCCEEEEEEEHHH------------HHhhhh---c--
Confidence 3678999999999999999999999995 566778899886 34455554444 322100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCccc---CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 573 HGVSASSDNIPRTENLDGPQFC---PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~---~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ...+..++|+ .+.++.|++++.++.+.|...+...+ ||||++|+++|+|||
T Consensus 170 -~----------~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~l--pVVd~~g~lvGiIt~ 224 (514)
T 1jcn_A 170 -D----------HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKL--PIVNDCDELVAIIAR 224 (514)
T ss_dssp ----------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCC--CEESSSSCCC----C
T ss_pred -c----------CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcc--cEECCCCeEEEEEEH
Confidence 0 0113455665 47888999999999999999998887 999999999999998
No 128
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.65 E-value=6.9e-06 Score=92.43 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=3.6
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCC
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVS 576 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~ 576 (704)
..++++|.+++.++++++++.|+.++|. ..+...+||+|+++.+|.++++++... . +
T Consensus 88 k~~~~~m~~~~v~v~~~~tv~ea~~~m~-~~~~s~~pVvd~g~lvGIVt~rDl~~~----------~--~---------- 144 (490)
T 4avf_A 88 KKHETAIVRDPVTVTPSTKIIELLQMAR-EYGFSGFPVVEQGELVGIVTGRDLRVK----------P--N---------- 144 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCcccCceEeCCCCcHHHHHHHHH-HhCCCEEEEEECCEEEEEEEhHHhhhc----------c--c----------
Confidence 4678899999999999999999999995 456667888886666666666554210 0 0
Q ss_pred CCCCCCCCCCCCCCCccc---CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 577 ASSDNIPRTENLDGPQFC---PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~---~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
. ..+..++|+ ++.++.+++++.++.+.|...+.+.+ ||||++|+++|+||+
T Consensus 145 ---~-----~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~l--pVVDe~g~lvGiIT~ 198 (490)
T 4avf_A 145 ---A-----GDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKM--LVVDENFYLRGLVTF 198 (490)
T ss_dssp ----------------------------------------------------------------
T ss_pred ---c-----CCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEE--EEEcCCCcEEEEEeh
Confidence 0 114667777 58899999999999999999988887 999999999999998
No 129
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.46 E-value=6.6e-05 Score=84.34 Aligned_cols=107 Identities=8% Similarity=0.059 Sum_probs=85.7
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeeccc---CCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCC
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVE---SSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHG 574 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~---~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~ 574 (704)
.++++|++++.++.+++++.|+.+.|.+ .+...+||+| +++.+|.++.+++.... . .
T Consensus 91 ~~~~im~~~~~~v~~~~tv~ea~~~m~~-~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---------~----------~ 150 (491)
T 1zfj_A 91 RSENGVIIDPFFLTPEHKVSEAEELMQR-YRISGVPIVETLANRKLVGIITNRDMRFIS---------D----------Y 150 (491)
T ss_dssp HHTTTTSSSCCCBCSSSBHHHHHHHHHH-TTCSEEEEESCTTTCBEEEEEEHHHHHHCS---------C----------S
T ss_pred hHHhcCcCCCeEECCCCcHHHHHHHHHH-cCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---------c----------C
Confidence 4588999999999999999999999954 4666788887 46778888888865320 0 0
Q ss_pred CCCCCCCCCCCCCCCCCccc--CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 575 VSASSDNIPRTENLDGPQFC--PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~--~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
+.+..++|+ ++.++.|++++.++...|...+.+.+ ||||++|+++|++|+
T Consensus 151 -----------~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~l--pVVd~~g~lvGivt~ 202 (491)
T 1zfj_A 151 -----------NAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKL--PLVDNSGRLSGLITI 202 (491)
T ss_dssp -----------SSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEE--EEECTTSBEEEEEEH
T ss_pred -----------CCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEE--EEEcCCCcEEEEEEH
Confidence 013455666 67788999999999999999888887 999999999999998
No 130
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.43 E-value=3.1e-05 Score=87.48 Aligned_cols=108 Identities=9% Similarity=0.042 Sum_probs=84.1
Q ss_pred cccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccC---CCceEEeehHHHhhhcCCCcccccccCchhhcCCCC
Q psy6631 497 VYVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVES---SGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPH 573 (704)
Q Consensus 497 ~~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~---~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~ 573 (704)
...++.|.+++.++++++++.|+.+.|.+ .+...+||+|+ ++.+|.++.+++.... . .
T Consensus 113 ~~~~~~m~~d~v~l~~~~tv~ea~~~m~~-~~~s~~pVvd~g~~~~lvGiVt~rDl~~~~--~------~---------- 173 (511)
T 3usb_A 113 KRSESGVISDPFFLTPEHQVYDAEHLMGK-YRISGVPVVNNLDERKLVGIITNRDMRFIQ--D------Y---------- 173 (511)
T ss_dssp HTSSSCSSSSCCCBCTTSBHHHHHHHHHH-HCCSEEEEESCTTTCBEEEEEEHHHHTTCC--C------S----------
T ss_pred hccccccccCCEEECCCCCHHHHHHHHHH-cCCcEEEEEecCCCCEEEEEEEehHhhhhc--c------C----------
Confidence 34567788999999999999999999965 55667888874 5678888888753200 0 0
Q ss_pred CCCCCCCCCCCCCCCCCCccc--CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 574 GVSASSDNIPRTENLDGPQFC--PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~--~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|+ ++.+..+++++.++...|...+.+.+ ||||++|+++|+||+
T Consensus 174 ------------~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~l--pVVDe~g~l~GiIT~ 225 (511)
T 3usb_A 174 ------------SIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKL--PLVDNNGVLQGLITI 225 (511)
T ss_dssp ------------SSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEE--EEECTTSBEEEEEEH
T ss_pred ------------CCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEE--EEEeCCCCEeeeccH
Confidence 012445555 67788899999999999998888876 999999999999998
No 131
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.17 E-value=6.2e-05 Score=84.57 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=1.4
Q ss_pred ccccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhhcCCCcccccccCchhhcCCCCCCCC
Q psy6631 498 YVEDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGVSA 577 (704)
Q Consensus 498 ~V~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~~~ 577 (704)
..++.|.+++.++.+++++.|+.+.|.+ .+...+||+++++.+|.++.+++. . + .
T Consensus 94 ~~~~~m~~~~~~v~~~~tv~ea~~~~~~-~~~~~~pVvd~~~lvGivt~~Dl~------------~--~---~------- 148 (486)
T 2cu0_A 94 RAERLIVEDVITIAPDETVDFALFLMEK-HGIDGLPVVEDEKVVGIITKKDIA------------A--R---E------- 148 (486)
T ss_dssp TCC-----------------------------------------------------------------------------
T ss_pred chhhccccCceEECCCCCHHHHHHHHHH-cCCcEEEEEECCEEEEEEEHHHhc------------c--C---C-------
Confidence 3467899999999999999999999954 445567777665555555554432 1 0 0
Q ss_pred CCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH--HHHHH
Q psy6631 578 SSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR--IRMAF 642 (704)
Q Consensus 578 ~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr--~r~a~ 642 (704)
..+..++|. ++.+..|++++.++.+.|...+.+.+ ||||++|+++|++|+ +..++
T Consensus 149 --------~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~l--pVVde~g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 149 --------GKLVKELMTKEVITVPESIEVEEALKIMIENRIDRL--PVVDERGKLVGLITMSDLVARK 206 (486)
T ss_dssp --------------------------------------------------------------------
T ss_pred --------CCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEE--EEEecCCeEEEEEEHHHHHHhh
Confidence 013556677 77888999999999999998888776 999999999999999 44443
No 132
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.82 E-value=0.00019 Score=80.22 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=0.9
Q ss_pred ccccccCceEEeCCCCHHHHHHHhHhcCCCceeecccCC----CceEEeehHHHhhhcCCCcccccccCchhhcCCCCCC
Q psy6631 500 EDFMVRDVKYIWNNMTYRDLKNLLKENRSLRVFPLVESS----GKFEQMEIKRREERQRRPSRFEVTPAPDLLRGNPHGV 575 (704)
Q Consensus 500 ~dvM~~~v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~----~~~~~i~~~~~~~~~~~~sr~~v~~~~~~l~~~~~~~ 575 (704)
+..|..++.+++||+++.|+.++|. ..+..-+||+|++ +.+|+++.+|.. ++ |.
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~-~~~isgvpVvd~g~~~~kLvGIvT~RD~r--------f~-----d~-------- 198 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKA-KFGFCGVPITETGEPDSKLLGIVTGRDVQ--------FQ-----DA-------- 198 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHH-HhCCCccccccccCcCCEEEEEEeccccc--------cc-----cc--------
Confidence 4558888999999999999999995 4566678888752 344544444321 10 00
Q ss_pred CCCCCCCCCCCCCCCCccc-CccccCCCchhhhcccccccccCCCCcCcccCCCCCcchHHHH
Q psy6631 576 SASSDNIPRTENLDGPQFC-PVFGCQPKKSILKKTNSFSLKNFSPMLTPNVTPYTTVTGAESR 637 (704)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~-~v~~~~p~~si~k~~~~~~~~~~~~~~~Pvv~~~g~l~G~vtr 637 (704)
..+..++|+ .+.+..+..++.++...+.......+ ||||++|+|+|+|||
T Consensus 199 ----------~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kiekl--pVVd~~g~LvGlIT~ 249 (556)
T 4af0_A 199 ----------ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKL--PIVDSNGHLVSLVAR 249 (556)
T ss_dssp ---------------------------------------------------------------
T ss_pred ----------ceEhhhhcccceEEecCCCCHHHHHHHHHHccccce--eEEccCCcEEEEEEe
Confidence 014667788 78888888888888888777777666 999999999999998
No 133
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=96.69 E-value=0.0022 Score=52.38 Aligned_cols=44 Identities=7% Similarity=0.009 Sum_probs=39.0
Q ss_pred ceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhh
Q psy6631 507 VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREE 551 (704)
Q Consensus 507 v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~ 551 (704)
+++++||+++.||+++|. .+++..+||+|+++.+|.++++|...
T Consensus 2 ~vtv~p~~tv~ea~~~M~-~~~i~~~~V~d~~~lvGIvT~~Di~~ 45 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILS-RNKAGSAVVMEGDEILGVVTERDILD 45 (70)
T ss_dssp EEEECTTCBHHHHHHHHH-HTTCSEEEEEETTEEEEEEEHHHHHH
T ss_pred CEEECCCCcHHHHHHHHH-HcCCCEEEEEECCEEEEEEEHHHHHH
Confidence 679999999999999995 57788999999888899999999753
No 134
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=93.97 E-value=0.11 Score=41.08 Aligned_cols=45 Identities=7% Similarity=0.029 Sum_probs=37.9
Q ss_pred ceEEeCCCCHHHHHHHhHhcCCCceeecccCCCceEEeehHHHhhh
Q psy6631 507 VKYIWNNMTYRDLKNLLKENRSLRVFPLVESSGKFEQMEIKRREER 552 (704)
Q Consensus 507 v~tV~~d~sl~ea~~~m~~~~rl~Vvpvv~~~~~~~~i~~~~~~~~ 552 (704)
+.++++++++.|+++.|. ..+...+||+|+++.+|.+++++....
T Consensus 2 ~~~v~~~~~~~~a~~~m~-~~~~~~~pV~d~~~l~Givt~~dl~~~ 46 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILS-RNKAGSAVVMEGDEILGVVTERDILDK 46 (70)
T ss_dssp EEEECTTCBHHHHHHHHH-HTTCSEEEEEETTEEEEEEEHHHHHHH
T ss_pred CeEECCCCcHHHHHHHHH-HcCCCEEEEEECCEEEEEEEHHHHHHH
Confidence 578999999999999995 466788999988777899998887654
Done!