BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6634
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VGH7|CLCN2_DROME Chloride channel protein 2 OS=Drosophila melanogaster GN=ClC-a PE=2
SV=3
Length = 1193
Score = 87.8 bits (216), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/45 (91%), Positives = 43/45 (95%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLTF TLVAK+IGLTATLGSG+PLGKE
Sbjct: 242 GSGIPEMKTILRGVQLKEYLTFKTLVAKVIGLTATLGSGMPLGKE 286
>sp|P51789|CLCN2_RABIT Chloride channel protein 2 OS=Oryctolagus cuniculus GN=CLCN2 PE=2
SV=1
Length = 898
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 39/45 (86%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+PLGKE
Sbjct: 164 GSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKE 208
>sp|Q9R0A1|CLCN2_MOUSE Chloride channel protein 2 OS=Mus musculus GN=Clcn2 PE=2 SV=2
Length = 908
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 39/45 (86%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+PLGKE
Sbjct: 169 GSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKE 213
>sp|Q9WU45|CLCN2_CAVPO Chloride channel protein 2 OS=Cavia porcellus GN=CLCN2 PE=2 SV=1
Length = 902
Score = 79.3 bits (194), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 39/45 (86%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+PLGKE
Sbjct: 163 GSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKE 207
>sp|P35525|CLCN2_RAT Chloride channel protein 2 OS=Rattus norvegicus GN=Clcn2 PE=2 SV=1
Length = 907
Score = 79.3 bits (194), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/45 (82%), Positives = 39/45 (86%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT T VAK+IGLT LGSG+PLGKE
Sbjct: 167 GSGIPEMKTILRGVVLKEYLTLKTFVAKVIGLTCALGSGMPLGKE 211
>sp|P51788|CLCN2_HUMAN Chloride channel protein 2 OS=Homo sapiens GN=CLCN2 PE=1 SV=2
Length = 898
Score = 79.3 bits (194), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/45 (80%), Positives = 39/45 (86%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT T +AK+IGLT LGSG+PLGKE
Sbjct: 161 GSGIPEMKTILRGVVLKEYLTLKTFIAKVIGLTCALGSGMPLGKE 205
>sp|P35524|CLCN1_RAT Chloride channel protein 1 OS=Rattus norvegicus GN=Clcn1 PE=2 SV=1
Length = 994
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT VAK++ LTA LGSG+P+GKE
Sbjct: 188 GSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAGLGSGIPVGKE 232
>sp|Q64347|CLCN1_MOUSE Chloride channel protein 1 OS=Mus musculus GN=Clcn1 PE=1 SV=3
Length = 994
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT VAK++ LTA LGSG+P+GKE
Sbjct: 188 GSGIPEMKTILRGVVLKEYLTLKAFVAKVVALTAGLGSGIPVGKE 232
>sp|Q9MZT1|CLCN1_CANFA Chloride channel protein 1 OS=Canis familiaris GN=CLCN1 PE=1 SV=1
Length = 976
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT VAK++ LTA LGSG+P+GKE
Sbjct: 188 GSGIPEMKTILRGVILKEYLTLKAFVAKVVALTAGLGSGIPVGKE 232
>sp|P35523|CLCN1_HUMAN Chloride channel protein 1 OS=Homo sapiens GN=CLCN1 PE=1 SV=3
Length = 988
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPEMKTILRGV LKEYLT VAK++ LTA LGSG+P+GKE
Sbjct: 188 GSGIPEMKTILRGVVLKEYLTMKAFVAKVVALTAGLGSGIPVGKE 232
>sp|P21564|CICH_TORMA Chloride channel protein OS=Torpedo marmorata PE=1 SV=1
Length = 805
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPE+KTI+RG L EYLT T VAK +GLT L +G PLGKE
Sbjct: 122 GSGIPELKTIIRGAVLHEYLTLRTFVAKTVGLTVALSAGFPLGKE 166
>sp|P35522|CICH_TORCA Chloride channel protein OS=Torpedo californica PE=1 SV=3
Length = 810
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
GSGIPE+KTI+RG L EYLT T VAK +GLT L +G PLGKE
Sbjct: 122 GSGIPELKTIIRGAVLHEYLTLRTFVAKTVGLTVALSAGFPLGKE 166
>sp|Q9W701|CLCKB_XENLA Chloride channel protein ClC-Kb OS=Xenopus laevis GN=clcnkb PE=1
SV=1
Length = 689
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
GSGIPE+KTIL GV L+EYLT AK++GLT TL GS + LGK
Sbjct: 121 GSGIPELKTILSGVILEEYLTIKNFGAKVVGLTCTLSAGSTMFLGK 166
>sp|Q9R279|CLCN3_CAVPO H(+)/Cl(-) exchange transporter 3 OS=Cavia porcellus GN=CLCN3 PE=2
SV=1
Length = 760
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEP--ISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 177 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGN 236
Query: 79 ISNF 82
I ++
Sbjct: 237 IFSY 240
>sp|P51804|CLCKB_RABIT Chloride channel protein ClC-Kb OS=Oryctolagus cuniculus GN=CLCNKB
PE=2 SV=1
Length = 678
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
+ GSGIPE+KTIL GV L+ YL AK++GL+ TL GS L LGK
Sbjct: 117 FSGGSGIPELKTILSGVVLENYLDIKNFGAKVVGLSCTLATGSTLFLGK 165
>sp|Q9TTU3|CLCN5_RABIT H(+)/Cl(-) exchange transporter 5 OS=Oryctolagus cuniculus GN=CLCN5
PE=2 SV=1
Length = 746
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TLV K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|Q54LQ4|CLCE_DICDI Chloride channel protein E OS=Dictyostelium discoideum GN=clcE PE=3
SV=1
Length = 994
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGK 67
Y GSGIPEMK+I+ G+ L L F TLV+KI+G+ +GL +G+
Sbjct: 250 YAVGSGIPEMKSIMSGINLSRVLGFKTLVSKIVGMVCASAAGLTIGR 296
>sp|Q9WVD4|CLCN5_MOUSE H(+)/Cl(-) exchange transporter 5 OS=Mus musculus GN=Clcn5 PE=2
SV=1
Length = 746
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TLV K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|P51796|CLCN5_RAT H(+)/Cl(-) exchange transporter 5 OS=Rattus norvegicus GN=Clcn5
PE=2 SV=1
Length = 746
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TLV K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|P51803|CLCKA_RABIT Chloride channel protein ClC-Ka OS=Oryctolagus cuniculus GN=CLCNKA
PE=2 SV=1
Length = 687
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
+ GSGIPE+KTIL GV L+ YL AK++GL+ TL GS L LGK
Sbjct: 117 FSGGSGIPELKTILSGVVLENYLDIKNFGAKVVGLSCTLATGSTLFLGK 165
>sp|Q5RBK4|CLCN5_PONAB H(+)/Cl(-) exchange transporter 5 OS=Pongo abelii GN=CLCN5 PE=2
SV=1
Length = 746
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TLV K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|P51795|CLCN5_HUMAN H(+)/Cl(-) exchange transporter 5 OS=Homo sapiens GN=CLCN5 PE=1
SV=1
Length = 746
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TLV K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLVIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|Q9GKE7|CLCN5_PIG H(+)/Cl(-) exchange transporter 5 OS=Sus scrofa GN=CLCN5 PE=2 SV=1
Length = 746
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|P51792|CLCN3_RAT H(+)/Cl(-) exchange transporter 3 OS=Rattus norvegicus GN=Clcn3
PE=2 SV=2
Length = 818
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 235 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGN 294
Query: 79 ISNF 82
I ++
Sbjct: 295 IFSY 298
>sp|O18894|CLCN3_RABIT H(+)/Cl(-) exchange transporter 3 OS=Oryctolagus cuniculus GN=CLCN3
PE=2 SV=3
Length = 818
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 235 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGN 294
Query: 79 ISNF 82
I ++
Sbjct: 295 IFSY 298
>sp|P51790|CLCN3_HUMAN H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens GN=CLCN3 PE=1
SV=2
Length = 818
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 235 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGN 294
Query: 79 ISNF 82
I ++
Sbjct: 295 IFSY 298
>sp|P51791|CLCN3_MOUSE H(+)/Cl(-) exchange transporter 3 OS=Mus musculus GN=Clcn3 PE=1
SV=2
Length = 818
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 235 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTITLVLAVASGLSLGKEGPLVHVACCCGN 294
Query: 79 ISNF 82
I ++
Sbjct: 295 IFSY 298
>sp|Q61418|CLCN4_MOUSE H(+)/Cl(-) exchange transporter 4 OS=Mus musculus GN=Clcn4 PE=2
SV=2
Length = 747
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEP--ISVSGHCG 77
Y GSGIPE+KTIL G ++ YL TL+ K + L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTLVLVVSSGLSLGKEGPLVHVACCCG 222
>sp|P51794|CLCN4_RAT H(+)/Cl(-) exchange transporter 4 OS=Rattus norvegicus GN=Clcn4
PE=2 SV=1
Length = 747
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEP--ISVSGHCG 77
Y GSGIPE+KTIL G ++ YL TL+ K + L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTLVLVVSSGLSLGKEGPLVHVACCCG 222
>sp|Q99P66|CLCN5_CAVPO H(+)/Cl(-) exchange transporter 5 OS=Cavia porcellus GN=CLCN5 PE=2
SV=1
Length = 746
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K I L + SGL LGKE + V+ CG
Sbjct: 164 YACGSGIPEIKTILSGFIIRGYLGKWTLIIKTITLVLAVSSGLSLGKEGPLVHVACCCGN 223
Query: 79 I 79
I
Sbjct: 224 I 224
>sp|P51793|CLCN4_HUMAN H(+)/Cl(-) exchange transporter 4 OS=Homo sapiens GN=CLCN4 PE=1
SV=2
Length = 760
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEP--ISVSGHCG 77
Y GSGIPE+KTIL G ++ YL TL+ K + L + SGL LGKE + V+ CG
Sbjct: 177 YACGSGIPEIKTILSGFIIRGYLGKWTLLIKTVTLVLVVSSGLSLGKEGPLVHVACCCG 235
>sp|Q5RDJ7|CLCN3_PONAB H(+)/Cl(-) exchange transporter 3 OS=Pongo abelii GN=CLCN3 PE=2
SV=1
Length = 801
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE--PISVSGHCGP 78
Y GSGIPE+KTIL G ++ YL TL+ K + L + SGL LGKE + V+ CG
Sbjct: 235 YACGSGIPEIKTILSGFIIRGYLGKWTLMIKTVTLVLAVASGLSLGKEGPLVHVACCCGN 294
Query: 79 ISNF 82
I ++
Sbjct: 295 IFSY 298
>sp|Q06393|CLCKA_RAT Chloride channel protein ClC-Ka OS=Rattus norvegicus GN=Clcnka PE=1
SV=3
Length = 687
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
+ GSG+PE+KT+L GV L++YL AK++GL+ TL GS + LGK
Sbjct: 117 FSGGSGLPELKTMLSGVVLEDYLDIKNFGAKVVGLSCTLATGSTIFLGK 165
>sp|Q9WUB6|CLCKB_MOUSE Chloride channel protein ClC-Kb OS=Mus musculus GN=Clcnkb PE=1 SV=2
Length = 687
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSG 62
GSGIPE+KTIL GV L++YL AK++GL+ TL +G
Sbjct: 120 GSGIPEVKTILTGVVLEDYLDIKNFGAKVVGLSCTLATG 158
>sp|P92943|CLCD_ARATH Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D
PE=1 SV=2
Length = 792
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE-PISVSGHC 76
+GSGIPE+K L G+ + L F TL+ KI G ++G GL LGKE P+ +G C
Sbjct: 147 AGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGAC 201
>sp|P51801|CLCKB_HUMAN Chloride channel protein ClC-Kb OS=Homo sapiens GN=CLCNKB PE=1 SV=3
Length = 687
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
GSGIPE+KT+L GV L++YL AK++GL+ TL GS L LGK
Sbjct: 120 GSGIPEVKTMLAGVVLEDYLDIKNFGAKVVGLSCTLACGSTLFLGK 165
>sp|Q75JF3|CLCC_DICDI Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3
SV=1
Length = 757
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE 68
S SGIPE+K IL GV ++E L F L+ KI+ L + SGL +G E
Sbjct: 167 SSSGIPEVKGILNGVKVREALGFRALLGKIVSLVLSFSSGLFVGPE 212
>sp|P51800|CLCKA_HUMAN Chloride channel protein ClC-Ka OS=Homo sapiens GN=CLCNKA PE=1 SV=1
Length = 687
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
GSGIPE+KT+L GV L++YL AK++GL+ TL GS L LGK
Sbjct: 120 GSGIPELKTMLAGVILEDYLDIKNFGAKVVGLSCTLATGSTLFLGK 165
>sp|P51802|CLCKB_RAT Chloride channel protein ClC-Kb OS=Rattus norvegicus GN=Clcnkb PE=1
SV=1
Length = 687
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 24 GSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSG 62
GSGIPE+KTIL GV L++YL AK++GL+ TL +G
Sbjct: 120 GSGIPEVKTILTGVILEDYLDIKNFGAKVVGLSCTLATG 158
>sp|Q9WUB7|CLCKA_MOUSE Chloride channel protein ClC-Ka OS=Mus musculus GN=Clcnka PE=1 SV=2
Length = 687
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATL--GSGLPLGK 67
+ GSG+PE+KT+L GV L+ YL AK++GL+ TL GS + LGK
Sbjct: 117 FSGGSGLPELKTMLSGVVLENYLDIKNFGAKVVGLSCTLATGSTIFLGK 165
>sp|P0C197|CLCNX_USTMA Probable chloride channel protein UM03490-D OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM11084.2 PE=3 SV=1
Length = 1131
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 21 YLSGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHC 76
Y +GSGI E+K IL G + YL F TL K + L + SGL +GKE +V C
Sbjct: 332 YAAGSGISEIKCILAGFVINGYLGFWTLAIKSLTLPLAIASGLSVGKEGPAVHVAC 387
>sp|Q54AX6|CLCA_DICDI Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2
SV=1
Length = 863
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHCGPISNF 82
SGSGIPE+K L G+ + + + TLV K++ L SGL LG E GP+ +
Sbjct: 199 SGSGIPEVKGYLNGIRIPQSMNVKTLVGKLVSLILAYSSGLILGPE--------GPMIHI 250
Query: 83 G 83
G
Sbjct: 251 G 251
>sp|P60300|CLCG_ARATH Putative chloride channel-like protein CLC-g OS=Arabidopsis
thaliana GN=CBSCLC6 PE=2 SV=2
Length = 765
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE-PISVSGHC 76
+GSGIPE+K L GV E + TL+ KIIG + + + L +GK P+ +G C
Sbjct: 142 AGSGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIGKAGPMVHTGAC 196
>sp|O60159|YHYB_SCHPO Putative anion/proton exchange transporter C19C7.11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC19C7.11 PE=3 SV=2
Length = 766
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISV 72
+GSGI E+K I+ G +L+F ++ K +GL + SGL +GKE SV
Sbjct: 173 AGSGISEIKCIISGFLRDSFLSFRVMLVKCVGLPLAIASGLSVGKEGPSV 222
>sp|P92941|CLCA_ARATH Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A
PE=1 SV=2
Length = 775
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE-PISVSGHC 76
+G GIPE+K L G+ F T++ KI+G + +GL LGKE P+ G C
Sbjct: 158 AGPGIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIGAVAAGLDLGKEGPLVHIGSC 212
>sp|P51798|CLCN7_HUMAN H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1
SV=2
Length = 805
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHCGPISNF 82
+GSGIP++K L GV + + TLV K+ G+ ++ GL +GKE + H G +
Sbjct: 202 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMI--HSGSVIAA 259
Query: 83 GI 84
GI
Sbjct: 260 GI 261
>sp|P51799|CLCN7_RAT H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7
PE=2 SV=1
Length = 803
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHCGPISNF 82
+GSGIP++K L GV + + TLV K+ G+ ++ GL +GKE + H G +
Sbjct: 200 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMI--HSGSVIAA 257
Query: 83 GI 84
GI
Sbjct: 258 GI 259
>sp|Q4PKH3|CLCN7_BOVIN H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1
Length = 809
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHCGPISNF 82
+GSGIP++K L GV + + TLV K+ G+ ++ GL +GKE + H G +
Sbjct: 206 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMI--HSGSVIAA 263
Query: 83 GI 84
GI
Sbjct: 264 GI 265
>sp|O70496|CLCN7_MOUSE H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1
SV=1
Length = 803
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKEPISVSGHCGPISNF 82
+GSGIP++K L GV + + TLV K+ G+ ++ GL +GKE + H G +
Sbjct: 200 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMI--HSGSVIAA 257
Query: 83 GI 84
GI
Sbjct: 258 GI 259
>sp|Q9TT16|CLCN6_RABIT Chloride transport protein 6 OS=Oryctolagus cuniculus GN=CLCN6 PE=2
SV=1
Length = 869
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 23 SGSGIPEMKTILRGVALKEYLTFNTLVAKIIGLTATLGSGLPLGKE-PISVSG 74
+GSGIPE+K L GV + + TL+ K+ G+ ++ GL +GKE P+ SG
Sbjct: 155 AGSGIPEIKCYLNGVKVPGIVRLRTLLCKVFGVLFSVAGGLFVGKEGPMIHSG 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,300,716
Number of Sequences: 539616
Number of extensions: 1352331
Number of successful extensions: 2701
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 2642
Number of HSP's gapped (non-prelim): 122
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)