Query psy6637
Match_columns 105
No_of_seqs 104 out of 202
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 23:20:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d4z_A Chloride channel protei 99.9 5.8E-25 2E-29 168.5 8.9 77 1-77 171-247 (250)
2 4esy_A CBS domain containing m 99.1 1.1E-10 3.6E-15 81.3 5.6 56 21-77 108-163 (170)
3 3ghd_A A cystathionine beta-sy 99.1 2.7E-10 9.4E-15 71.8 6.9 46 29-74 2-47 (70)
4 3fio_A A cystathionine beta-sy 99.0 1.3E-09 4.6E-14 65.4 7.2 48 29-76 2-49 (70)
5 2pfi_A Chloride channel protei 98.9 2.4E-09 8.2E-14 72.4 6.7 52 25-76 96-147 (164)
6 1pbj_A Hypothetical protein; s 98.9 2.9E-09 9.8E-14 69.1 6.6 56 20-76 67-122 (125)
7 2j9l_A Chloride channel protei 98.9 3.6E-09 1.2E-13 73.1 7.4 60 17-77 107-166 (185)
8 3kpb_A Uncharacterized protein 98.9 1.1E-08 3.7E-13 66.3 8.3 57 19-76 63-120 (122)
9 1y5h_A Hypothetical protein RV 98.9 5.2E-09 1.8E-13 68.9 6.8 52 25-76 80-131 (133)
10 3nqr_A Magnesium and cobalt ef 98.9 5.5E-09 1.9E-13 69.1 6.9 51 25-76 75-126 (127)
11 3lfr_A Putative metal ION tran 98.9 5.7E-09 1.9E-13 70.1 6.6 56 19-76 71-127 (136)
12 2ef7_A Hypothetical protein ST 98.8 3.7E-09 1.3E-13 69.6 5.4 58 19-77 68-126 (133)
13 3lv9_A Putative transporter; C 98.8 9.7E-09 3.3E-13 69.3 7.5 58 17-76 87-145 (148)
14 3fhm_A Uncharacterized protein 98.8 1.1E-08 3.8E-13 70.5 7.9 59 18-77 93-151 (165)
15 4gqw_A CBS domain-containing p 98.8 5.2E-09 1.8E-13 69.6 5.9 56 21-77 88-144 (152)
16 2rc3_A CBS domain; in SITU pro 98.8 7.6E-09 2.6E-13 68.5 6.4 56 20-76 76-131 (135)
17 3hf7_A Uncharacterized CBS-dom 98.8 8.9E-09 3.1E-13 68.8 6.6 50 27-76 77-127 (130)
18 2o16_A Acetoin utilization pro 98.8 8.1E-09 2.8E-13 71.0 6.3 57 20-77 80-136 (160)
19 3sl7_A CBS domain-containing p 98.8 5.4E-09 1.8E-13 71.7 5.4 57 20-77 100-157 (180)
20 3jtf_A Magnesium and cobalt ef 98.8 8.5E-09 2.9E-13 68.4 6.1 56 19-76 70-126 (129)
21 2yzq_A Putative uncharacterize 98.8 7.7E-09 2.6E-13 75.5 6.3 58 18-76 221-279 (282)
22 3oco_A Hemolysin-like protein 98.8 1.5E-08 5.2E-13 69.0 7.3 58 18-77 86-144 (153)
23 4fry_A Putative signal-transdu 98.8 1.2E-08 4E-13 69.3 6.5 56 21-77 81-136 (157)
24 3lhh_A CBS domain protein; str 98.8 1.3E-08 4.6E-13 71.0 6.9 59 17-77 106-165 (172)
25 3i8n_A Uncharacterized protein 98.8 1.6E-08 5.3E-13 67.1 6.7 49 28-76 80-129 (130)
26 2rih_A Conserved protein with 98.8 1.6E-08 5.4E-13 67.5 6.6 58 18-77 71-129 (141)
27 3gby_A Uncharacterized protein 98.8 3.3E-09 1.1E-13 70.0 3.1 55 20-75 70-125 (128)
28 3gby_A Uncharacterized protein 98.8 2.2E-08 7.5E-13 66.0 6.9 59 18-77 5-63 (128)
29 2yzi_A Hypothetical protein PH 98.8 2.9E-08 9.9E-13 65.7 7.3 57 19-77 73-130 (138)
30 3lv9_A Putative transporter; C 98.8 1.3E-08 4.3E-13 68.7 5.6 54 21-75 26-83 (148)
31 1o50_A CBS domain-containing p 98.7 1.4E-08 4.9E-13 69.2 5.8 54 21-76 99-153 (157)
32 4esy_A CBS domain containing m 98.7 3.5E-08 1.2E-12 68.4 7.3 59 18-77 18-77 (170)
33 3kxr_A Magnesium transporter, 98.7 1.6E-08 5.4E-13 73.9 5.7 77 20-97 118-199 (205)
34 1pbj_A Hypothetical protein; s 98.7 4.9E-08 1.7E-12 63.2 7.5 52 25-76 7-58 (125)
35 3k2v_A Putative D-arabinose 5- 98.7 1.9E-08 6.5E-13 68.1 5.3 49 25-73 101-149 (149)
36 2ef7_A Hypothetical protein ST 98.7 7E-08 2.4E-12 63.4 7.6 55 21-76 7-61 (133)
37 2p9m_A Hypothetical protein MJ 98.7 3.1E-08 1.1E-12 65.4 5.7 51 25-75 79-135 (138)
38 2nyc_A Nuclear protein SNF4; b 98.7 4.8E-08 1.6E-12 64.5 6.4 49 28-76 92-141 (144)
39 3org_A CMCLC; transporter, tra 98.7 2.3E-08 7.9E-13 84.3 5.8 57 20-77 570-626 (632)
40 3ocm_A Putative membrane prote 98.6 4.8E-08 1.6E-12 69.1 6.0 51 27-77 107-158 (173)
41 3fv6_A YQZB protein; CBS domai 98.6 1.3E-07 4.6E-12 64.6 7.8 55 18-74 17-72 (159)
42 3oi8_A Uncharacterized protein 98.6 9E-08 3.1E-12 65.6 6.9 56 20-76 40-99 (156)
43 1pvm_A Conserved hypothetical 98.6 6.4E-08 2.2E-12 67.8 6.0 57 19-76 76-133 (184)
44 3k2v_A Putative D-arabinose 5- 98.6 1.1E-07 3.9E-12 64.2 7.0 57 19-76 29-88 (149)
45 3ddj_A CBS domain-containing p 98.6 6.2E-08 2.1E-12 71.7 6.1 58 19-77 228-286 (296)
46 2uv4_A 5'-AMP-activated protei 98.6 1.1E-07 3.6E-12 64.6 6.7 49 27-75 101-150 (152)
47 3kpb_A Uncharacterized protein 98.6 8.8E-08 3E-12 61.9 6.0 53 25-77 7-60 (122)
48 3lhh_A CBS domain protein; str 98.6 7.9E-08 2.7E-12 67.0 6.0 50 27-76 52-103 (172)
49 2yvy_A MGTE, Mg2+ transporter 98.6 1E-07 3.6E-12 71.6 7.0 59 18-77 199-258 (278)
50 1vr9_A CBS domain protein/ACT 98.6 1.1E-07 3.8E-12 69.0 6.9 57 20-77 74-131 (213)
51 2o16_A Acetoin utilization pro 98.6 8.1E-08 2.8E-12 65.9 5.8 55 20-75 7-62 (160)
52 3lqn_A CBS domain protein; csg 98.6 1.1E-07 3.8E-12 63.8 6.3 56 19-77 88-144 (150)
53 3fv6_A YQZB protein; CBS domai 98.6 7.4E-08 2.5E-12 65.9 5.4 58 19-77 82-145 (159)
54 3kh5_A Protein MJ1225; AMPK, A 98.6 1.3E-07 4.4E-12 68.5 7.0 57 19-76 149-205 (280)
55 3oco_A Hemolysin-like protein 98.6 3E-08 1E-12 67.5 3.4 48 28-75 31-81 (153)
56 3oi8_A Uncharacterized protein 98.6 9E-08 3.1E-12 65.6 5.6 46 25-71 109-155 (156)
57 3kh5_A Protein MJ1225; AMPK, A 98.6 9.7E-08 3.3E-12 69.2 5.9 53 21-74 226-279 (280)
58 2qrd_G Protein C1556.08C; AMPK 98.6 2E-07 6.8E-12 70.0 7.7 52 27-78 265-317 (334)
59 3ctu_A CBS domain protein; str 98.5 1.1E-07 3.8E-12 64.4 5.4 57 18-77 86-143 (156)
60 2rc3_A CBS domain; in SITU pro 98.5 2.9E-07 1E-11 60.7 7.4 48 27-74 17-64 (135)
61 2yzi_A Hypothetical protein PH 98.5 2.5E-07 8.6E-12 61.1 7.0 54 21-75 10-65 (138)
62 2p9m_A Hypothetical protein MJ 98.5 3.4E-07 1.2E-11 60.3 7.0 55 20-75 10-66 (138)
63 3l2b_A Probable manganase-depe 98.5 1.8E-07 6E-12 68.3 6.1 56 21-77 10-66 (245)
64 3nqr_A Magnesium and cobalt ef 98.5 1.5E-07 5E-12 62.1 5.1 47 29-75 15-63 (127)
65 3k6e_A CBS domain protein; str 98.5 9.4E-08 3.2E-12 66.6 4.3 54 20-76 88-142 (156)
66 2pfi_A Chloride channel protei 98.5 2.7E-07 9.2E-12 62.2 6.4 51 25-75 19-72 (164)
67 3ocm_A Putative membrane prote 98.5 6.1E-07 2.1E-11 63.4 8.4 74 2-75 20-96 (173)
68 3t4n_C Nuclear protein SNF4; C 98.5 2.9E-07 9.8E-12 68.9 7.0 49 28-76 271-320 (323)
69 2oux_A Magnesium transporter; 98.5 2.2E-07 7.5E-12 70.7 6.4 53 25-77 207-260 (286)
70 3lqn_A CBS domain protein; csg 98.5 2.4E-07 8.2E-12 62.1 5.9 49 28-76 26-75 (150)
71 1yav_A Hypothetical protein BS 98.5 1.8E-07 6E-12 63.7 5.2 53 21-76 89-142 (159)
72 4fry_A Putative signal-transdu 98.5 2.1E-07 7E-12 63.1 5.5 47 29-75 23-69 (157)
73 3jtf_A Magnesium and cobalt ef 98.5 3.2E-07 1.1E-11 60.7 6.3 51 27-77 15-67 (129)
74 2emq_A Hypothetical conserved 98.5 2.8E-07 9.6E-12 62.1 6.1 55 20-77 85-140 (157)
75 2rih_A Conserved protein with 98.5 5.7E-07 2E-11 59.9 7.5 55 21-76 8-65 (141)
76 3hf7_A Uncharacterized CBS-dom 98.5 2.5E-07 8.5E-12 61.6 5.7 51 27-77 12-64 (130)
77 2emq_A Hypothetical conserved 98.5 2.7E-07 9.2E-12 62.2 5.8 58 18-76 11-71 (157)
78 2nyc_A Nuclear protein SNF4; b 98.5 4.2E-07 1.4E-11 59.9 6.6 52 25-76 17-69 (144)
79 2uv4_A 5'-AMP-activated protei 98.5 4.3E-07 1.5E-11 61.5 6.7 50 27-76 29-79 (152)
80 1o50_A CBS domain-containing p 98.5 5.5E-07 1.9E-11 61.3 7.2 53 22-75 20-73 (157)
81 3kxr_A Magnesium transporter, 98.4 8E-07 2.7E-11 64.7 8.4 53 21-74 57-113 (205)
82 3lfr_A Putative metal ION tran 98.4 3.2E-07 1.1E-11 61.4 5.7 48 28-75 14-63 (136)
83 1yav_A Hypothetical protein BS 98.4 3.7E-07 1.3E-11 62.1 6.1 52 25-76 20-74 (159)
84 3ctu_A CBS domain protein; str 98.4 3E-07 1E-11 62.2 5.5 50 27-76 25-75 (156)
85 3fhm_A Uncharacterized protein 98.4 5.3E-07 1.8E-11 62.0 6.8 49 28-76 36-85 (165)
86 2v8q_E 5'-AMP-activated protei 98.4 5.2E-07 1.8E-11 67.8 7.1 52 26-77 272-324 (330)
87 1y5h_A Hypothetical protein RV 98.4 3.6E-07 1.2E-11 59.9 5.2 51 25-75 14-66 (133)
88 1pvm_A Conserved hypothetical 98.4 9E-07 3.1E-11 61.9 7.1 56 19-75 10-66 (184)
89 2d4z_A Chloride channel protei 98.4 7.2E-07 2.4E-11 67.9 7.0 57 19-76 14-73 (250)
90 3l2b_A Probable manganase-depe 98.4 3.9E-07 1.3E-11 66.5 5.2 54 20-74 187-242 (245)
91 3k6e_A CBS domain protein; str 98.4 5.7E-07 2E-11 62.6 5.8 49 28-76 26-75 (156)
92 3i8n_A Uncharacterized protein 98.3 3.9E-07 1.3E-11 60.2 4.1 49 28-76 17-67 (130)
93 2j9l_A Chloride channel protei 98.3 3.6E-07 1.2E-11 62.9 4.0 47 29-75 25-76 (185)
94 4gqw_A CBS domain-containing p 98.3 7.4E-07 2.5E-11 59.0 4.6 47 28-74 16-63 (152)
95 3ddj_A CBS domain-containing p 98.3 1.5E-06 5.1E-11 64.2 6.6 51 25-75 162-213 (296)
96 3sl7_A CBS domain-containing p 98.3 6.6E-07 2.3E-11 61.1 4.2 47 28-74 15-62 (180)
97 3t4n_C Nuclear protein SNF4; C 98.3 1.4E-06 4.7E-11 65.2 6.0 53 25-77 196-249 (323)
98 1vr9_A CBS domain protein/ACT 98.3 1.3E-06 4.5E-11 63.3 5.8 51 25-75 19-70 (213)
99 2zy9_A Mg2+ transporter MGTE; 98.2 1.7E-06 5.9E-11 70.7 6.4 59 18-77 219-278 (473)
100 2oux_A Magnesium transporter; 98.2 2.5E-06 8.5E-11 64.8 6.5 50 25-74 143-198 (286)
101 2yvy_A MGTE, Mg2+ transporter 98.2 1.1E-05 3.6E-10 60.6 8.9 51 22-73 139-195 (278)
102 2qrd_G Protein C1556.08C; AMPK 98.2 3.8E-06 1.3E-10 63.0 6.3 52 25-76 191-243 (334)
103 2v8q_E 5'-AMP-activated protei 98.1 2.8E-06 9.5E-11 63.8 5.5 51 25-75 124-176 (330)
104 2yzq_A Putative uncharacterize 98.1 6.1E-06 2.1E-10 60.0 7.2 56 20-76 62-119 (282)
105 3pc3_A CG1753, isoform A; CBS, 98.1 3.6E-06 1.2E-10 69.2 6.2 55 20-75 386-443 (527)
106 1zfj_A Inosine monophosphate d 98.0 1.3E-05 4.5E-10 64.9 7.6 57 19-76 153-211 (491)
107 3usb_A Inosine-5'-monophosphat 97.9 1.7E-05 5.7E-10 65.9 6.8 52 25-76 181-234 (511)
108 1zfj_A Inosine monophosphate d 97.9 1.6E-05 5.6E-10 64.3 6.0 55 18-73 90-147 (491)
109 2zy9_A Mg2+ transporter MGTE; 97.9 4.9E-05 1.7E-09 62.1 8.1 62 11-73 143-215 (473)
110 3pc3_A CG1753, isoform A; CBS, 97.8 1.8E-05 6.1E-10 65.0 5.5 57 18-77 451-512 (527)
111 4fxs_A Inosine-5'-monophosphat 97.8 3.5E-05 1.2E-09 63.7 6.6 59 13-72 84-143 (496)
112 3usb_A Inosine-5'-monophosphat 97.8 3.4E-05 1.2E-09 64.0 6.4 57 15-72 110-169 (511)
113 1vrd_A Inosine-5'-monophosphat 97.7 5.4E-06 1.8E-10 67.5 0.8 66 2-72 83-149 (494)
114 1me8_A Inosine-5'-monophosphat 97.7 4.9E-06 1.7E-10 68.6 0.0 57 20-77 163-222 (503)
115 1vrd_A Inosine-5'-monophosphat 97.7 5.6E-06 1.9E-10 67.4 0.3 57 20-77 157-216 (494)
116 1jcn_A Inosine monophosphate d 97.7 1.2E-05 3.9E-10 66.0 1.6 68 1-73 95-166 (514)
117 2cu0_A Inosine-5'-monophosphat 97.6 8.2E-06 2.8E-10 66.7 0.0 56 20-76 152-208 (486)
118 4avf_A Inosine-5'-monophosphat 97.6 9.3E-06 3.2E-10 67.0 0.3 56 16-72 86-141 (490)
119 4avf_A Inosine-5'-monophosphat 97.6 9.4E-06 3.2E-10 67.0 0.0 49 28-76 158-207 (490)
120 1jcn_A Inosine monophosphate d 97.6 3.9E-06 1.3E-10 68.8 -2.7 56 20-76 175-233 (514)
121 4fxs_A Inosine-5'-monophosphat 97.5 1.3E-05 4.3E-10 66.4 -0.8 49 28-76 160-209 (496)
122 3org_A CMCLC; transporter, tra 97.4 5.2E-05 1.8E-09 63.9 2.7 53 25-77 459-515 (632)
123 4af0_A Inosine-5'-monophosphat 97.4 3E-05 1E-09 66.3 0.6 52 20-72 140-195 (556)
124 1me8_A Inosine-5'-monophosphat 97.3 3.6E-05 1.2E-09 63.4 0.0 49 25-73 103-155 (503)
125 4af0_A Inosine-5'-monophosphat 97.2 8.3E-05 2.8E-09 63.5 0.8 51 25-75 206-257 (556)
126 2cu0_A Inosine-5'-monophosphat 97.2 7.8E-05 2.7E-09 60.9 0.6 60 12-72 87-146 (486)
127 1svj_A Potassium-transporting 75.5 2 6.8E-05 30.3 2.9 35 38-72 121-155 (156)
128 3me7_A Putative uncharacterize 56.7 33 0.0011 22.8 6.0 42 38-79 103-162 (170)
129 2as9_A Serine protease; trypsi 45.3 9.6 0.00033 26.7 1.8 15 54-68 161-176 (210)
130 1h75_A Glutaredoxin-like prote 44.1 21 0.00073 20.4 3.0 36 41-76 39-75 (81)
131 1r7h_A NRDH-redoxin; thioredox 42.9 35 0.0012 18.9 3.7 34 41-74 39-73 (75)
132 2w7s_A Serine protease SPLA; h 42.3 12 0.00042 25.6 1.9 16 54-69 157-173 (200)
133 1agj_A Epidermolytic toxin A; 41.5 14 0.00047 26.3 2.1 15 54-68 198-213 (242)
134 3tjo_A Serine protease HTRA1; 38.9 11 0.00037 27.2 1.2 15 54-68 192-207 (231)
135 2kmv_A Copper-transporting ATP 38.7 37 0.0013 24.1 4.0 24 46-69 161-184 (185)
136 2arf_A Wilson disease ATPase; 38.7 33 0.0011 23.6 3.7 24 46-69 142-165 (165)
137 2vid_A Serine protease SPLB; h 38.7 15 0.00052 24.9 1.9 16 54-69 160-176 (204)
138 4glq_A Methyl-accepting chemot 38.4 29 0.001 23.6 3.4 27 42-68 96-125 (171)
139 2lb5_A Sensor histidine kinase 37.7 50 0.0017 22.0 4.4 26 42-67 140-168 (208)
140 1qtf_A Exfoliative toxin B; se 37.4 16 0.00055 26.2 2.0 16 54-69 189-205 (246)
141 1cjw_A Protein (serotonin N-ac 37.4 67 0.0023 19.4 4.7 32 37-68 37-68 (166)
142 1xvq_A Thiol peroxidase; thior 37.3 37 0.0013 22.6 3.7 15 51-65 130-145 (175)
143 1tif_A IF3-N, translation init 36.4 27 0.00092 22.3 2.7 27 51-77 14-41 (78)
144 3hfo_A SSR3341 protein; HFQ, S 36.4 25 0.00086 22.2 2.5 34 37-70 10-43 (70)
145 3by8_A Sensor protein DCUS; hi 36.3 25 0.00084 23.2 2.6 22 53-74 111-133 (142)
146 2lsj_B DNA polymerase kappa; R 42.4 7.6 0.00026 20.4 0.0 13 87-99 11-23 (26)
147 2pka_B Kallikrein A; serine pr 35.9 20 0.0007 23.7 2.2 11 58-68 111-121 (152)
148 3ci6_A Phosphoenolpyruvate-pro 35.3 34 0.0011 21.0 3.0 23 46-68 110-135 (171)
149 3lgi_A Protease DEGS; stress-s 34.5 16 0.00055 26.2 1.6 16 53-68 178-194 (237)
150 2lrn_A Thiol:disulfide interch 34.5 40 0.0014 21.4 3.4 37 41-77 101-139 (152)
151 3trc_A Phosphoenolpyruvate-pro 34.1 35 0.0012 21.2 3.0 20 48-67 110-132 (171)
152 1p0z_A Sensor kinase CITA; tra 33.6 30 0.001 22.3 2.7 20 53-72 106-126 (131)
153 1qhk_A RNAse HI, protein (ribo 33.6 27 0.00091 20.0 2.1 25 53-77 3-28 (47)
154 3k6y_A Serine protease, possib 33.3 15 0.00051 26.2 1.2 15 54-68 186-201 (237)
155 2o8l_A V8 protease, taphylococ 33.2 18 0.00061 26.7 1.7 12 57-68 176-187 (274)
156 3hfn_A ASL2047 protein; HFQ, S 32.9 19 0.00064 22.9 1.5 32 39-70 14-45 (72)
157 3ia1_A THIO-disulfide isomeras 31.9 34 0.0012 21.6 2.7 41 37-77 97-142 (154)
158 3oov_A Methyl-accepting chemot 31.8 41 0.0014 20.9 3.0 22 47-68 109-133 (169)
159 1ttz_A Conserved hypothetical 31.8 19 0.00066 22.3 1.4 33 44-77 40-75 (87)
160 2e4s_A CAMP and CAMP-inhibited 31.5 40 0.0014 21.5 3.0 16 52-67 131-146 (189)
161 3p01_A Two-component response 31.4 68 0.0023 20.9 4.2 25 43-67 123-150 (184)
162 2w3g_A DOSS, two component sen 30.9 44 0.0015 20.3 3.0 16 52-67 100-115 (153)
163 1wcz_A Glutamyl endopeptidase; 30.2 22 0.00074 26.1 1.7 11 58-68 177-187 (268)
164 3e0y_A Conserved domain protei 30.0 37 0.0013 21.3 2.6 20 48-67 115-137 (181)
165 2bmx_A Alkyl hydroperoxidase C 30.0 70 0.0024 21.5 4.2 38 39-76 116-167 (195)
166 3r8s_H 50S ribosomal protein L 29.8 31 0.0011 24.2 2.4 21 57-77 86-106 (149)
167 1z4r_A General control of amin 28.5 97 0.0033 19.4 4.5 30 39-68 43-72 (168)
168 2sga_A Proteinase A; hydrolase 28.4 34 0.0012 23.2 2.3 16 53-68 139-154 (181)
169 2h01_A 2-Cys peroxiredoxin; th 28.4 87 0.003 20.9 4.4 47 29-76 96-156 (192)
170 1kux_A Aralkylamine, serotonin 28.1 94 0.0032 20.1 4.5 31 37-67 66-96 (207)
171 2qa9_E Streptogrisin-B; chymot 28.0 35 0.0012 23.2 2.3 15 54-68 144-158 (185)
172 3h7t_A Group 3 allergen smipp- 27.7 33 0.0011 23.5 2.2 15 54-68 189-203 (235)
173 3mgd_A Predicted acetyltransfe 27.6 84 0.0029 18.9 4.0 20 49-68 50-69 (157)
174 3sti_A Protease DEGQ; serine p 27.1 27 0.00092 25.7 1.7 15 54-68 190-205 (245)
175 3drn_A Peroxiredoxin, bacterio 26.4 1.3E+02 0.0045 19.3 5.4 29 39-67 96-129 (161)
176 1we0_A Alkyl hydroperoxide red 26.3 59 0.002 21.6 3.2 48 29-77 93-155 (187)
177 3owc_A Probable acetyltransfer 25.6 80 0.0027 19.7 3.6 32 37-68 50-86 (188)
178 1bo4_A Protein (serratia marce 25.4 1.1E+02 0.0038 18.6 4.2 18 51-68 76-94 (168)
179 3eyt_A Uncharacterized protein 24.8 1.3E+02 0.0045 18.7 5.4 36 40-75 108-148 (158)
180 1s7k_A Acetyl transferase; GNA 24.6 1.3E+02 0.0044 18.5 6.7 18 51-68 70-88 (182)
181 3fix_A N-acetyltransferase; te 24.5 1.2E+02 0.0041 19.1 4.4 18 52-69 89-106 (183)
182 2q7b_A Acetyltransferase, GNAT 24.4 53 0.0018 21.2 2.6 31 39-69 60-90 (181)
183 3hcy_A Putative two-component 23.8 53 0.0018 20.3 2.5 28 40-67 80-110 (151)
184 3s69_A Thrombin-like enzyme de 23.6 47 0.0016 22.9 2.3 14 55-68 184-197 (234)
185 1pq7_A Trypsin; ultra-high res 23.6 35 0.0012 23.6 1.7 11 58-68 188-198 (224)
186 4ag7_A Glucosamine-6-phosphate 23.5 1.3E+02 0.0045 18.2 5.1 20 49-68 66-88 (165)
187 1hj8_A Trypsin I; hydrolase, r 23.5 47 0.0016 23.1 2.3 12 57-68 182-193 (222)
188 1div_A Ribosomal protein L9; r 23.5 1.6E+02 0.0053 20.5 5.1 40 38-77 62-105 (149)
189 3mfj_A Cationic trypsin; serin 23.4 47 0.0016 23.1 2.3 12 57-68 183-194 (223)
190 1l1j_A Heat shock protease HTR 23.3 37 0.0013 24.7 1.8 12 57-68 190-201 (239)
191 3ic4_A Glutaredoxin (GRX-1); s 23.3 58 0.002 19.0 2.5 34 42-75 57-91 (92)
192 3k2n_A Sigma-54-dependent tran 23.2 70 0.0024 20.1 3.0 25 43-67 110-137 (177)
193 3num_A Serine protease HTRA1; 23.2 35 0.0012 25.7 1.8 15 54-68 175-190 (332)
194 1nsl_A Probable acetyltransfer 23.2 1.4E+02 0.0048 18.4 6.0 17 52-68 70-86 (184)
195 4e7n_A Snake-venom thrombin-li 23.0 48 0.0017 22.8 2.3 15 54-68 187-201 (238)
196 4evy_A Aminoglycoside N(6')-ac 23.0 94 0.0032 19.4 3.6 29 39-67 52-80 (166)
197 1s3z_A Aminoglycoside 6'-N-ace 22.7 1.1E+02 0.0037 18.9 3.8 19 51-69 63-82 (165)
198 3raz_A Thioredoxin-related pro 22.7 1.3E+02 0.0043 18.9 4.2 42 36-77 90-138 (151)
199 2voc_A Thioredoxin; electron t 22.7 43 0.0015 20.2 1.8 34 46-79 68-105 (112)
200 3dba_A CONE CGMP-specific 3',5 22.6 70 0.0024 21.2 3.0 20 49-68 125-144 (180)
201 3ey5_A Acetyltransferase-like, 22.6 90 0.0031 20.0 3.5 34 35-68 34-68 (181)
202 3exn_A Probable acetyltransfer 22.5 1.3E+02 0.0045 17.9 4.8 17 52-68 64-80 (160)
203 2aiq_A Protein C activator; sn 22.5 50 0.0017 23.0 2.3 12 57-68 183-194 (231)
204 1nkw_F 50S ribosomal protein L 22.2 1.2E+02 0.0042 21.0 4.3 40 38-77 61-103 (146)
205 2eui_A Probable acetyltransfer 22.2 1.3E+02 0.0044 17.7 4.4 20 49-68 46-67 (153)
206 1gvz_A Kallikrein-1E2; antigen 22.0 48 0.0017 23.1 2.2 12 57-68 195-206 (237)
207 2zmf_A CAMP and CAMP-inhibited 21.9 77 0.0026 19.9 3.0 16 52-67 131-146 (189)
208 1npm_A Neuropsin; serine prote 21.9 52 0.0018 22.8 2.3 12 57-68 186-197 (225)
209 1uul_A Tryparedoxin peroxidase 21.9 1E+02 0.0035 20.8 3.8 39 39-77 110-163 (202)
210 3dsb_A Putative acetyltransfer 21.7 1.2E+02 0.0042 17.9 3.8 28 40-67 44-72 (157)
211 4euy_A Uncharacterized protein 21.6 56 0.0019 19.4 2.2 34 43-76 65-102 (105)
212 1fxy_A Coagulation factor XA-t 21.6 53 0.0018 22.8 2.3 13 56-68 186-198 (228)
213 1sgf_A 7S NGF, nerve growth fa 21.5 50 0.0017 23.1 2.2 11 58-68 199-209 (240)
214 2atr_A Acetyltransferase, GNAT 21.0 97 0.0033 18.2 3.2 28 39-67 32-59 (138)
215 2k2n_A Sensor protein, SYB-CPH 21.0 71 0.0024 20.7 2.7 26 42-67 110-138 (172)
216 3ha9_A Uncharacterized thiored 20.7 97 0.0033 19.7 3.4 36 40-75 121-160 (165)
217 1te0_A Protease DEGS; two doma 20.5 49 0.0017 24.7 2.0 15 54-68 168-183 (318)
218 3a2v_A Probable peroxiredoxin; 20.2 1.2E+02 0.0041 22.3 4.1 39 39-77 106-160 (249)
219 1yr0_A AGR_C_1654P, phosphinot 20.2 1.7E+02 0.0059 18.3 5.2 20 49-68 54-73 (175)
220 4evm_A Thioredoxin family prot 20.2 1.2E+02 0.0042 17.8 3.6 35 41-75 96-135 (138)
221 1qst_A TGCN5 histone acetyl tr 20.2 1.4E+02 0.0046 18.6 3.9 28 41-68 37-65 (160)
No 1
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.91 E-value=5.8e-25 Score=168.47 Aligned_cols=77 Identities=49% Similarity=0.843 Sum_probs=73.6
Q ss_pred CChHHHHhHHHHHhcCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 1 MSPEDQKKWEEEEMGQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 1 ~~~~e~~~we~~~l~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
|+++|+++|+++++.+++||+.|.||++||||+++|||++||.||+++|++|+|||+.||||||||+|||++||++.
T Consensus 171 i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~GrLVGIVTrkDl~kai~~~ 247 (250)
T 2d4z_A 171 LTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSMGKLVGVVALAEIQAAIEGS 247 (250)
T ss_dssp CBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHC-
T ss_pred cChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEECCEEEEEEEHHHHHHHHHHH
Confidence 57899999999999999999998899999999999999999999999999999999999999999999999999754
No 2
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.10 E-value=1.1e-10 Score=81.29 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=51.2
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+ +.+.|+++.+++++.+|..+|...|+++++|+++|+|+||||++||.+++...
T Consensus 108 ~~i-m~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 108 SAV-MTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQDGVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp HHH-CBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHTTTSCCC
T ss_pred hhh-cccCcccCCcchhHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHHHHHHHhc
Confidence 334 67889999999999999999999999999999999999999999999998544
No 3
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=99.09 E-value=2.7e-10 Score=71.81 Aligned_cols=46 Identities=17% Similarity=0.235 Sum_probs=43.8
Q ss_pred ceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhh
Q psy6637 29 PFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI 74 (105)
++++.+++|+.+|..+|...++++++|+++|+|+||||.+|+.+++
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHH
Confidence 6899999999999999999999999999999999999999997655
No 4
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=99.01 E-value=1.3e-09 Score=65.42 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=45.4
Q ss_pred ceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 29 PFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
|+++.+++++.+|..+|...++++++|++.|+++|+||.+|+.+++..
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEGDEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999998744
No 5
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.92 E-value=2.4e-09 Score=72.45 Aligned_cols=52 Identities=27% Similarity=0.502 Sum_probs=47.8
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
+++.|+++.+++++.+|..+|...++++++|+++|+++||||++||.+++..
T Consensus 96 ~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 96 TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 3344899999999999999999999999999999999999999999998854
No 6
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.91 E-value=2.9e-09 Score=69.12 Aligned_cols=56 Identities=9% Similarity=0.112 Sum_probs=50.3
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
...+ +.+.|+++.+++++.+|..+|...++++++|++.|+++|+||++|+.+++..
T Consensus 67 v~~~-m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 67 VWEV-MERDLVTISPRATIKEAAEKMVKNVVWRLLVEEDDEIIGVISATDILRAKMA 122 (125)
T ss_dssp HHHH-CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHC-
T ss_pred HHHH-cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 3445 6678999999999999999999999999999999999999999999998854
No 7
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.91 E-value=3.6e-09 Score=73.08 Aligned_cols=60 Identities=27% Similarity=0.459 Sum_probs=53.8
Q ss_pred cccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 17 KVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 17 ~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
......+ +++.|+++.+++++..|..+|...++++++|+++|+++||||++||.+++...
T Consensus 107 ~~~v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 107 TLKLRNI-LDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTHNGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CEECGGG-EESSCCEEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHHH
T ss_pred CccHHHh-hCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEECCEEEEEEEHHHHHHHHHHh
Confidence 3455666 77889999999999999999999999999999999999999999999988544
No 8
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.88 E-value=1.1e-08 Score=66.29 Aligned_cols=57 Identities=16% Similarity=0.107 Sum_probs=51.2
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-CeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-GrLVGvVT~kDL~kaI~~ 76 (105)
....+ +.+.|+++.+++++.+|..+|...++++++|++. |+++|+||.+|+.+++..
T Consensus 63 ~v~~~-~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 63 TIEEI-MTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp BGGGT-SBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred CHHHH-hcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 45566 6788999999999999999999999999999996 999999999999998854
No 9
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.87 E-value=5.2e-09 Score=68.93 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=48.5
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+.|+++.+++++.+|..+|...++++++|+++|+++|+||++|+.+++.+
T Consensus 80 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 80 ARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHTCC-
T ss_pred hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHh
Confidence 6688999999999999999999999999999999999999999999998753
No 10
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.87 E-value=5.5e-09 Score=69.05 Aligned_cols=51 Identities=14% Similarity=0.146 Sum_probs=45.7
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+ |+++.+++++.+|..+|...++++++|++ +|+++|+||++|+.+++.+
T Consensus 75 m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 75 LRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred cCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 434 88999999999999999999999999997 7999999999999998843
No 11
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.85 E-value=5.7e-09 Score=70.05 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=48.8
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..+.+ +.+ |+++.+++++..|..+|...++++++|++ +|+++||||++|+.+++.+
T Consensus 71 ~v~~~-m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 71 DVKKL-LRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp CGGGT-CBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--
T ss_pred CHHHH-cCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 34555 555 99999999999999999999999999997 7999999999999999855
No 12
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.85 E-value=3.7e-09 Score=69.62 Aligned_cols=58 Identities=12% Similarity=0.269 Sum_probs=51.3
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
....+ +.+.|+++.+++++..|..+|...++++++|++ +|+++|+||.+|+.+++...
T Consensus 68 ~v~~~-~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 68 KAEEF-MTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp BGGGT-SEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred CHHHH-cCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 34455 567899999999999999999999999999998 89999999999999988544
No 13
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.84 E-value=9.7e-09 Score=69.27 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=51.1
Q ss_pred cccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 17 KVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 17 ~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
......+ + ..|+++.+++++.+|..+|...++++++|++ +|+++|+||+.|+.+++.+
T Consensus 87 ~~~v~~~-m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 87 KIELEEI-L-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp CCCGGGT-C-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred CccHHHh-c-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3445566 5 7789999999999999999999999999998 5999999999999998843
No 14
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.84 E-value=1.1e-08 Score=70.46 Aligned_cols=59 Identities=15% Similarity=0.169 Sum_probs=52.9
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
.....+ +.+.|+++.+++++..|..+|...++++++|++.|+++|+||++||.+++...
T Consensus 93 ~~v~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 93 QSVSVA-MTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEENGRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp SBGGGT-SBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHTTCC
T ss_pred CCHHHH-hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHH
Confidence 344556 66889999999999999999999999999999999999999999999998655
No 15
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.84 E-value=5.2e-09 Score=69.57 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=50.1
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
..+ +.+.|+++.+++++.+|..+|...++++++|++ +|+++||||++|+.+++...
T Consensus 88 ~~~-m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 88 GDL-MTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp HHH-SEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC-
T ss_pred HHh-cCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 344 567789999999999999999999999999998 89999999999999998654
No 16
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.83 E-value=7.6e-09 Score=68.46 Aligned_cols=56 Identities=11% Similarity=0.170 Sum_probs=51.0
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
...+ +.+.|+++.+++++..|..+|...++++++|+++|+++|+||.+|+.+++..
T Consensus 76 v~~~-m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 76 VKEI-MTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDDGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGGT-SBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHC
T ss_pred HHHh-ccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEeCCEEEEEEEHHHHHHHHHh
Confidence 4445 6688999999999999999999999999999999999999999999998854
No 17
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=8.9e-09 Score=68.78 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=46.4
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..|+++.+++++.+|..+|...++++++|++ +|+++||||++|+.+++.+
T Consensus 77 ~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 4588999999999999999999999999996 7999999999999999854
No 18
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.81 E-value=8.1e-09 Score=71.02 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=51.2
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
...+ +.+.|+++.+++++..|..+|...++++++|+++|+++||||++||.+++...
T Consensus 80 v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~g~lvGiit~~dil~~~~~~ 136 (160)
T 2o16_A 80 LFEV-MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKDVLVGIITDSDFVTIAINL 136 (160)
T ss_dssp HHHH-SCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEETTEEEEEECHHHHHHHHHHH
T ss_pred HHHH-hcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEECCEEEEEEEHHHHHHHHHHH
Confidence 3445 66889999999999999999999999999999999999999999999987543
No 19
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.81 E-value=5.4e-09 Score=71.68 Aligned_cols=57 Identities=16% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
...+ +.+.|+++.+++++.+|..+|...++++++|++ +|+++||||++||.+++...
T Consensus 100 v~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~ 157 (180)
T 3sl7_A 100 VGDL-MTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQI 157 (180)
T ss_dssp HHHH-SEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HHHH-hCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 3445 678899999999999999999999999999998 89999999999999998654
No 20
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.81 E-value=8.5e-09 Score=68.45 Aligned_cols=56 Identities=18% Similarity=0.180 Sum_probs=48.5
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..+.+ +.+ |+++.+++++.+|..+|...++++++|++ +|+++|+||++|+.+++.+
T Consensus 70 ~v~~~-m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 70 DIRSL-VRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp CGGGG-CBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred CHHHH-hCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 34455 444 89999999999999999999999999998 4999999999999998843
No 21
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.80 E-value=7.7e-09 Score=75.52 Aligned_cols=58 Identities=9% Similarity=0.041 Sum_probs=52.1
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-CeEEEEEehHHHHHhhcc
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-GrLVGvVT~kDL~kaI~~ 76 (105)
...+.+ +.+.|+++.+++++.+|..+|...++++++|+++ |+++|+||++|+.+++..
T Consensus 221 ~~v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 221 KPVAEI-MTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp CBGGGT-CBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred CCHHHh-cCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 344556 7789999999999999999999999999999996 699999999999998854
No 22
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.80 E-value=1.5e-08 Score=69.01 Aligned_cols=58 Identities=17% Similarity=0.134 Sum_probs=51.1
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.....+ + +.|+++.+++++..|..+|...++++++|++ +|+++||||++|+.+++.+.
T Consensus 86 ~~v~~~-m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 86 AKISTI-M-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp SBGGGT-C-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred CcHHHH-h-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 344556 5 7899999999999999999999999999998 59999999999999998653
No 23
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.79 E-value=1.2e-08 Score=69.29 Aligned_cols=56 Identities=13% Similarity=0.168 Sum_probs=51.1
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+ +.+.|+++.+++++.+|..+|...++++++|+++|+++|+||++|+.+++...
T Consensus 81 ~~~-m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 81 EEI-MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp HHH-SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHTT
T ss_pred HHH-cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHHHH
Confidence 344 56789999999999999999999999999999999999999999999998655
No 24
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.79 E-value=1.3e-08 Score=71.01 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=52.0
Q ss_pred cccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 17 KVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 17 ~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
......+ + +.|+++.+++++.+|..+|...++++++|++ +|+++||||++|+.+++.+.
T Consensus 106 ~~~v~~i-m-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 106 RLELVDL-V-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp CCCGGGG-C-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTT
T ss_pred cccHHHH-h-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCC
Confidence 3445666 5 7899999999999999999999999999998 59999999999999998543
No 25
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.78 E-value=1.6e-08 Score=67.07 Aligned_cols=49 Identities=20% Similarity=0.215 Sum_probs=45.7
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.|+++.+++++.+|..+|...++++++|++ +|+++|+||+.|+.+++.+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 488999999999999999999999999997 6999999999999998853
No 26
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.77 E-value=1.6e-08 Score=67.54 Aligned_cols=58 Identities=14% Similarity=0.140 Sum_probs=51.0
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.....+ +.+.|+++.++ ++.+|..+|...++++++|++ +|+++|+||++||.+++...
T Consensus 71 ~~v~~~-m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 129 (141)
T 2rih_A 71 GPAMPI-ANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAIL 129 (141)
T ss_dssp SBSGGG-CBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHHH
T ss_pred CCHHHH-cCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHHH
Confidence 344555 67889999999 999999999999999999998 89999999999999887553
No 27
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.77 E-value=3.3e-09 Score=70.02 Aligned_cols=55 Identities=13% Similarity=0.009 Sum_probs=50.5
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
...+ +.+.++++.+++++.+|..+|...++++++|++ +|+++|+||++|+.+++.
T Consensus 70 v~~~-m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 70 LGEE-LLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CCGG-GCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHH-ccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 5566 678889999999999999999999999999996 899999999999999884
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.76 E-value=2.2e-08 Score=66.02 Aligned_cols=59 Identities=17% Similarity=0.072 Sum_probs=52.6
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
+-.+.+ +.+.+.++.+++++.+|..+|...++++++|++.|+++|+||.+|+.+++...
T Consensus 5 ~~v~~~-m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~~ 63 (128)
T 3gby_A 5 VTFSYL-AETDYPVFTLGGSTADAARRLAASGCACAPVLDGERYLGMVHLSRLLEGRKGW 63 (128)
T ss_dssp CBGGGG-CBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHTTCSSS
T ss_pred eEHHHh-hcCCcceECCCCCHHHHHHHHHHCCCcEEEEEECCEEEEEEEHHHHHHHHhhC
Confidence 344556 77889999999999999999999999999999999999999999999987644
No 29
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.75 E-value=2.9e-08 Score=65.66 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=50.7
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
....+ +.+.|+++.+++++.+|..+|...+++++ |++ +|+++|+||.+|+.+++...
T Consensus 73 ~v~~~-m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 73 PVERI-MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp BGGGT-CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCC
T ss_pred CHHHH-hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHH
Confidence 34455 67889999999999999999999999999 988 99999999999999998543
No 30
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.75 E-value=1.3e-08 Score=68.71 Aligned_cols=54 Identities=20% Similarity=0.259 Sum_probs=48.3
Q ss_pred CccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhc
Q psy6637 21 EQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 21 ~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~ 75 (105)
..+ +.+ .++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++.
T Consensus 26 ~di-M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~ 83 (148)
T 3lv9_A 26 REI-MVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKI 83 (148)
T ss_dssp GGT-SEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred HHc-cccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 344 555 7899999999999999999999999999986 89999999999998864
No 31
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.75 E-value=1.4e-08 Score=69.25 Aligned_cols=54 Identities=15% Similarity=0.095 Sum_probs=49.2
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..+ +.+ |+++.+++++.+|..+|...++++++|++ +|+++|+||++||.+++..
T Consensus 99 ~~i-m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 99 SEI-MLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp HHH-CBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred HHH-cCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 335 677 99999999999999999999999999998 8999999999999998843
No 32
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.72 E-value=3.5e-08 Score=68.41 Aligned_cols=59 Identities=19% Similarity=0.161 Sum_probs=52.5
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+..+.+ |.+.++++.+++|+.+|..+|...++++++|++ +|+|+|+||.+|+.+++...
T Consensus 18 ~~V~di-M~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~ 77 (170)
T 4esy_A 18 VPIRDI-LTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPF 77 (170)
T ss_dssp SBGGGG-CCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCT
T ss_pred CCHHHh-cCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhc
Confidence 445666 778899999999999999999999999999996 89999999999998877544
No 33
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.72 E-value=1.6e-08 Score=73.85 Aligned_cols=77 Identities=16% Similarity=0.116 Sum_probs=51.9
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC--chh--hhcccccCCcCCcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS--SVV--IRSITMADGLGEGQ 94 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~--~~~--~~~~~~~~~~~e~~ 94 (105)
...+ +++.|+++.+++++..|..+|...++++++|++ +|+|+|+||..|+.+++... ++. ..++.....+..+.
T Consensus 118 v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~ed~~~~~g~~~~~~~~~~~ 196 (205)
T 3kxr_A 118 LISL-LSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYEAQLMATAGMDESDDLFAPI 196 (205)
T ss_dssp GGGG-CCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC-------------------
T ss_pred HHHH-hcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHHHHHHhcCCCcccccCCCH
Confidence 4556 778899999999999999999999999999998 79999999999999998755 111 12333334455566
Q ss_pred hhh
Q psy6637 95 WNA 97 (105)
Q Consensus 95 ~~~ 97 (105)
|..
T Consensus 197 ~~~ 199 (205)
T 3kxr_A 197 LKG 199 (205)
T ss_dssp ---
T ss_pred HHH
Confidence 654
No 34
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.72 E-value=4.9e-08 Score=63.20 Aligned_cols=52 Identities=17% Similarity=0.026 Sum_probs=48.1
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+.++++.+++|+.+|..+|...+.++++|+++|+++|+||.+|+.+++..
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEETTEEEEEEEHHHHHHHHHH
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeCCeeEEEEeHHHHHHHHhc
Confidence 5678899999999999999999999999999999999999999999987643
No 35
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.70 E-value=1.9e-08 Score=68.06 Aligned_cols=49 Identities=12% Similarity=0.191 Sum_probs=45.8
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHh
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRND 73 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~ka 73 (105)
+.+.|+++.+++++.+|..+|...++++++|++.|+++|+||++|+.+|
T Consensus 101 m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~Giit~~dil~a 149 (149)
T 3k2v_A 101 MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADGDHLLGVVHMHDLLRA 149 (149)
T ss_dssp SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHTCC
T ss_pred cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecCCEEEEEEEHHHhhcC
Confidence 5677899999999999999999999999999999999999999999764
No 36
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.69 E-value=7e-08 Score=63.42 Aligned_cols=55 Identities=7% Similarity=0.185 Sum_probs=49.7
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+ +.+.++++.+++|+.+|..+|...+.++++|+++|+++|+||.+|+.+++..
T Consensus 7 ~~i-m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~~~ 61 (133)
T 2ef7_A 7 KEY-MKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVDGNKPVGIITERDIVKAIGK 61 (133)
T ss_dssp GGT-SBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHHT
T ss_pred HHh-ccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEcHHHHHHHHhc
Confidence 345 6677999999999999999999999999999999999999999999988754
No 37
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.68 E-value=3.1e-08 Score=65.37 Aligned_cols=51 Identities=18% Similarity=0.305 Sum_probs=46.9
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhC-----CcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVG-----VNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lg-----lr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
+.+.|+++.+++++.+|..+|...+ +++++|++ +|+++|+||.+||.+++.
T Consensus 79 m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 79 MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred hCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 6678999999999999999999999 99999998 899999999999999873
No 38
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.67 E-value=4.8e-08 Score=64.48 Aligned_cols=49 Identities=22% Similarity=0.360 Sum_probs=44.5
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.++++.+++++.+|..+|...++++++|++ +|+++|+||++|+.+++..
T Consensus 92 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 92 GVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp --CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 578999999999999999999999999998 7999999999999998843
No 39
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.66 E-value=2.3e-08 Score=84.31 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=51.4
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.+ +++.|+++.+++++.+|..+|...++++++|+++|+++||||++|+.+++..+
T Consensus 570 v~~i-Mt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve~G~lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 570 LVVP-CDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTERGKLVGIVEREDVAYGYSNS 626 (632)
T ss_dssp -CCS-CCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEETTEEEEEEEGGGTEECCCC-
T ss_pred cchh-hcCCCceecCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehhhHHHHHhhh
Confidence 3445 88999999999999999999999999999999999999999999999988654
No 40
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.64 E-value=4.8e-08 Score=69.13 Aligned_cols=51 Identities=16% Similarity=0.175 Sum_probs=47.4
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
..|+++.+++++..|..+|...++++++|++ +|+++||||++|+.+++.+.
T Consensus 107 ~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 107 RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 6689999999999999999999999999996 79999999999999999653
No 41
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.63 E-value=1.3e-07 Score=64.63 Aligned_cols=55 Identities=22% Similarity=0.265 Sum_probs=48.8
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
+....+ +.+ |+++.+++++.+|..+|...++++++|++ +|+++|+||.+||.+++
T Consensus 17 ~~v~~i-m~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 72 (159)
T 3fv6_A 17 LQVKDF-QSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRAS 72 (159)
T ss_dssp CBGGGS-CBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CCHHHH-cCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHh
Confidence 344455 445 88999999999999999999999999998 89999999999999987
No 42
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.62 E-value=9e-08 Score=65.63 Aligned_cols=56 Identities=11% Similarity=0.055 Sum_probs=48.2
Q ss_pred CCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~~ 76 (105)
.+.+ +.+ .++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++..
T Consensus 40 v~di-M~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~ 99 (156)
T 3oi8_A 40 VRDA-MITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN 99 (156)
T ss_dssp GGGT-CEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC
T ss_pred Hhhe-eeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc
Confidence 3445 444 6899999999999999999999999999985 599999999999998754
No 43
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.61 E-value=6.4e-08 Score=67.85 Aligned_cols=57 Identities=18% Similarity=0.210 Sum_probs=51.5
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-CeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-GrLVGvVT~kDL~kaI~~ 76 (105)
....+ +.+.++++.+++++..|..+|...++++++|++. |+++|+||++||.+++..
T Consensus 76 ~v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 76 PIRLV-MRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp BGGGT-SBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred CHHHH-hCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 44555 6778999999999999999999999999999996 999999999999998865
No 44
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.61 E-value=1.1e-07 Score=64.20 Aligned_cols=57 Identities=5% Similarity=-0.001 Sum_probs=51.2
Q ss_pred cCCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..+.+ +.+ .++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 29 ~v~di-m~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 29 RVNDI-MHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp BGGGT-SBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred CHHHH-hcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 34455 677 899999999999999999999999999998 7999999999999998864
No 45
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.61 E-value=6.2e-08 Score=71.66 Aligned_cols=58 Identities=7% Similarity=0.074 Sum_probs=52.0
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
....+ +.+.|+++.+++++.+|..+|...++++++|++ +|+++||||++||.+++...
T Consensus 228 ~v~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 228 VVKDV-MVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp BHHHH-SBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred CHHHH-hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHH
Confidence 34445 677899999999999999999999999999999 89999999999999998654
No 46
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.60 E-value=1.1e-07 Score=64.56 Aligned_cols=49 Identities=12% Similarity=0.107 Sum_probs=46.0
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
..|+++.+++++.+|..+|...++++++|++ +|+++|+||..|+.+++.
T Consensus 101 ~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 101 EGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp HTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 5788999999999999999999999999998 599999999999999874
No 47
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.60 E-value=8.8e-08 Score=61.91 Aligned_cols=53 Identities=17% Similarity=0.324 Sum_probs=48.7
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+.++++.+++|+.+|..+|...+.++++|++ +|+++|+||.+||.+++...
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~ 60 (122)
T 3kpb_A 7 LSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQN 60 (122)
T ss_dssp CCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTT
T ss_pred hCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhc
Confidence 557789999999999999999999999999998 89999999999999987654
No 48
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.59 E-value=7.9e-08 Score=67.04 Aligned_cols=50 Identities=14% Similarity=0.005 Sum_probs=46.1
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhcc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~~ 76 (105)
..++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++..
T Consensus 52 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~ 103 (172)
T 3lhh_A 52 SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIA 103 (172)
T ss_dssp GGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHT
T ss_pred HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhh
Confidence 45689999999999999999999999999986 999999999999998753
No 49
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.59 E-value=1e-07 Score=71.65 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=51.3
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.....+ +++.|+++.+++++..|..+|...++++++|++ +|+++||||..|+.+++.+.
T Consensus 199 ~~v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 199 TRVAEI-MNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp CBSTTT-SBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC---
T ss_pred CcHHHH-hCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 345566 778899999999999999999999999999998 79999999999999998654
No 50
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.59 E-value=1.1e-07 Score=68.97 Aligned_cols=57 Identities=16% Similarity=0.056 Sum_probs=50.8
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-CeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-GRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.+ +.+.|+++.+++++.+|..+|...++++++|++. |+++|+||.+|+.+++...
T Consensus 74 v~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 74 VFNK-VSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp SGGG-CBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHS
T ss_pred HHHH-ccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHH
Confidence 4445 6678999999999999999999999999999985 9999999999999987543
No 51
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.58 E-value=8.1e-08 Score=65.95 Aligned_cols=55 Identities=15% Similarity=0.348 Sum_probs=49.1
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
...+ +.+.++++.+++|+..|..+|...++++++|++ +|+++|+||.+||.+++.
T Consensus 7 v~di-m~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 7 VEDM-MTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp GGGT-SEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred HHHH-hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 3445 567789999999999999999999999999998 799999999999998764
No 52
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.58 E-value=1.1e-07 Score=63.79 Aligned_cols=56 Identities=13% Similarity=0.014 Sum_probs=48.9
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
....+ +.+.|+++.+++++.+|..+|...++ ++|++ +|+++|+||++|+.+++...
T Consensus 88 ~v~~~-m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 88 KVEQV-MKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp BGGGT-CBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred CHHHH-hcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHH
Confidence 34555 66889999999999999999999986 99998 89999999999999988543
No 53
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.58 E-value=7.4e-08 Score=65.92 Aligned_cols=58 Identities=5% Similarity=-0.064 Sum_probs=50.4
Q ss_pred cCCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEeeC-C---eEEEEEehHHHHHhhccC
Q psy6637 19 SFEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTAI-G---RLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 19 dl~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-G---rLVGvVT~kDL~kaI~~~ 77 (105)
..+.+ +.+ .++++.+++++..|..+|...++++++|++. | +++|+||++||.+++...
T Consensus 82 ~v~~~-m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 82 PVHII-MTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVSL 145 (159)
T ss_dssp BGGGT-SEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHHH
T ss_pred CHHHH-HcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHHH
Confidence 34455 555 7899999999999999999999999999985 5 999999999999988654
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.58 E-value=1.3e-07 Score=68.52 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=51.4
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~~ 76 (105)
....+ +.+.|+++.+++++..|..+|...+.++++|+++|+++|+||.+|+.+++..
T Consensus 149 ~v~~~-m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~~~~~~Givt~~dl~~~~~~ 205 (280)
T 3kh5_A 149 VIDDY-ITRDVIVATPGERLKDVARTMVRNGFRRLPVVSEGRLVGIITSTDFIKLLGS 205 (280)
T ss_dssp BSGGG-CBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHHTS
T ss_pred CHHHH-hCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEECCEEEEEEEHHHHHHHHhh
Confidence 44555 6678999999999999999999999999999999999999999999998853
No 55
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.58 E-value=3e-08 Score=67.49 Aligned_cols=48 Identities=6% Similarity=0.011 Sum_probs=44.7
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEe-e--CCeEEEEEehHHHHHhhc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVT-A--IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt-~--~GrLVGvVT~kDL~kaI~ 75 (105)
.++++.+++|+.+|..+|...++++++|+ + .|+++|+||.+||.+++.
T Consensus 31 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 31 SMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp GCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred heEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 68999999999999999999999999999 4 499999999999998864
No 56
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.57 E-value=9e-08 Score=65.64 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=42.6
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHH
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVR 71 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~ 71 (105)
+.+ |+++.+++++.+|..+|...++++++|++ +|+++||||++|+.
T Consensus 109 m~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 109 LRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp CBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred cCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 445 89999999999999999999999999997 79999999999975
No 57
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=98.56 E-value=9.7e-08 Score=69.20 Aligned_cols=53 Identities=19% Similarity=0.161 Sum_probs=48.1
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-CeEEEEEehHHHHHhh
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-GRLVGVVGLKEVRNDS 74 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-GrLVGvVT~kDL~kaI 74 (105)
..+ +.+.|+++.+++++.+|..+|...++++++|++. |+++|+||++|+.+++
T Consensus 226 ~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 226 EEI-MKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHH-SBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHGGGG
T ss_pred HHH-hcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEeHHHHHHhh
Confidence 344 5678999999999999999999999999999984 6999999999999886
No 58
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.56 E-value=2e-07 Score=70.04 Aligned_cols=52 Identities=13% Similarity=0.126 Sum_probs=48.3
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccCc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLSS 78 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~~ 78 (105)
+.|+++.+++++..|..+|...++++++|++ +|+++||||+.||.+++....
T Consensus 265 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 265 DGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp CCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred CCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 3789999999999999999999999999998 799999999999999987663
No 59
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.54 E-value=1.1e-07 Score=64.37 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=49.0
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.....+ +.+.|+++.+++++..|..+|...+ +++|++ +|+++|+||++|+.+++...
T Consensus 86 ~~v~~~-m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 86 TDIVHM-TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp SBGGGG-CBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHH
T ss_pred CcHHHh-ccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 334556 6788999999999999999998886 799998 89999999999999998544
No 60
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.54 E-value=2.9e-07 Score=60.71 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=44.9
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhh
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI 74 (105)
+.++++.+++|+.+|..+|...+.++++|+++|+++|+||.+||.+++
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~Givt~~dl~~~~ 64 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMKDEKLVGILTERDFSRKS 64 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEETTEEEEEEEHHHHHHHG
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEECCEEEEEEehHHHHHHH
Confidence 678999999999999999999999999999999999999999998643
No 61
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.54 E-value=2.5e-07 Score=61.07 Aligned_cols=54 Identities=13% Similarity=0.112 Sum_probs=47.8
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHH-Hhhc
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVR-NDSH 75 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~-kaI~ 75 (105)
..+ +.+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||. +++.
T Consensus 10 ~~i-m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 65 (138)
T 2yzi_A 10 KVY-MTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV 65 (138)
T ss_dssp GGT-CBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT
T ss_pred HHH-hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh
Confidence 344 557899999999999999999999999999998 89999999999997 4543
No 62
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.51 E-value=3.4e-07 Score=60.28 Aligned_cols=55 Identities=7% Similarity=0.125 Sum_probs=49.1
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHH-HHhhc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEV-RNDSH 75 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL-~kaI~ 75 (105)
...+ +.+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+|+ .+++.
T Consensus 10 v~~i-m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 10 VKDV-MTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp GGGT-SBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred HHHh-hcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 3445 667889999999999999999999999999998 7999999999999 88764
No 63
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.50 E-value=1.8e-07 Score=68.29 Aligned_cols=56 Identities=14% Similarity=0.050 Sum_probs=50.0
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+ +.+.|+++.+++++.+|..+|...++++++|++ +|+|+||||.+|+.+++...
T Consensus 10 ~~i-m~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 10 EDL-EMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp GGS-CCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred HHh-cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 345 567799999999999999999999999999998 59999999999999988543
No 64
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.50 E-value=1.5e-07 Score=62.09 Aligned_cols=47 Identities=11% Similarity=0.037 Sum_probs=44.5
Q ss_pred ceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhc
Q psy6637 29 PFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~ 75 (105)
++++.+++|+.+|..+|...+.++++|++. |+++|+||.+||.+++.
T Consensus 15 ~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (127)
T 3nqr_A 15 MITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMR 63 (127)
T ss_dssp CCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGS
T ss_pred eEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHh
Confidence 789999999999999999999999999985 89999999999999875
No 65
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.50 E-value=9.4e-08 Score=66.59 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=46.1
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
...+ +.+.|+++.+++++.+|..+|...+ +++|++ +|+++||||++|+.+++..
T Consensus 88 v~~i-m~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 88 IVHM-TKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp GGGT-CBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHh-hcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 3445 6788999999999999999998765 588886 8999999999999999843
No 66
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.49 E-value=2.7e-07 Score=62.23 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=47.3
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee---CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA---IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~---~GrLVGvVT~kDL~kaI~ 75 (105)
+.+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++.
T Consensus 19 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 19 MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp CBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred cCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 567889999999999999999999999999998 599999999999998874
No 67
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.49 E-value=6.1e-07 Score=63.39 Aligned_cols=74 Identities=9% Similarity=-0.045 Sum_probs=55.9
Q ss_pred ChHHHHhHHHHHhcCcccCCcccc-CCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhc
Q psy6637 2 SPEDQKKWEEEEMGQKVSFEQCHI-DPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 2 ~~~e~~~we~~~l~~~idl~~~~i-d~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~ 75 (105)
+++|++.....---..+....+.. ...++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++.
T Consensus 20 ~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 20 GVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI 96 (173)
T ss_dssp CHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh
Confidence 344544444333334445566622 235789999999999999999999999999973 89999999999998874
No 68
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.49 E-value=2.9e-07 Score=68.86 Aligned_cols=49 Identities=22% Similarity=0.360 Sum_probs=46.4
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.++++.+++++..|..+|...++++++|++ +|+++||||.+||.+++.+
T Consensus 271 ~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 271 GVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp CCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 689999999999999999999999999998 7999999999999999854
No 69
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.49 E-value=2.2e-07 Score=70.69 Aligned_cols=53 Identities=11% Similarity=0.054 Sum_probs=49.3
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+++.|+++.+++++..|..+|...++++++|++ +|+++||||..|+.+++...
T Consensus 207 m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 207 LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 667899999999999999999999999999998 79999999999999988654
No 70
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.49 E-value=2.4e-07 Score=62.15 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=45.8
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 26 ~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~ 75 (150)
T 3lqn_A 26 KVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILG 75 (150)
T ss_dssp GSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBC
T ss_pred ceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 388999999999999999999999999997 8999999999999998853
No 71
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.48 E-value=1.8e-07 Score=63.70 Aligned_cols=53 Identities=13% Similarity=0.083 Sum_probs=46.8
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..+ +.+.|+++.+++++.+|..+|...++ ++|++ +|+++|+||++|+.+++..
T Consensus 89 ~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 89 EEV-MLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp HHH-SBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HHh-cCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 334 66789999999999999999998887 99998 8999999999999998854
No 72
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.48 E-value=2.1e-07 Score=63.08 Aligned_cols=47 Identities=9% Similarity=0.175 Sum_probs=44.5
Q ss_pred ceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHHhhc
Q psy6637 29 PFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~kaI~ 75 (105)
.+++.+++|+.+|..+|...++++++|.++|+++|+||.+||.+++.
T Consensus 23 ~~~v~~~~~~~~a~~~~~~~~~~~~~V~~~~~~~Givt~~dl~~~~~ 69 (157)
T 4fry_A 23 IYTVTKNDFVYDAIKLMAEKGIGALLVVDGDDIAGIVTERDYARKVV 69 (157)
T ss_dssp CCEEETTSBHHHHHHHHHHHTCSEEEEESSSSEEEEEEHHHHHHHSG
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEeeCCEEEEEEEHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999874
No 73
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.48 E-value=3.2e-07 Score=60.71 Aligned_cols=51 Identities=10% Similarity=-0.052 Sum_probs=45.9
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhccC
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~~~ 77 (105)
+.++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++...
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~ 67 (129)
T 3jtf_A 15 SRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP 67 (129)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT
T ss_pred HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC
Confidence 34689999999999999999999999999985 8999999999999987543
No 74
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.47 E-value=2.8e-07 Score=62.07 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=48.4
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.+ +.+.|+++.+++++..|..+|...++ ++|++ +|+++|+||++|+.+++...
T Consensus 85 v~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 85 VEEV-MNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GGGT-CBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred HHHH-hCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 4445 67889999999999999999999987 88988 79999999999999998554
No 75
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.47 E-value=5.7e-07 Score=59.85 Aligned_cols=55 Identities=22% Similarity=0.251 Sum_probs=48.7
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-C--eEEEEEehHHHHHhhcc
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-G--RLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-G--rLVGvVT~kDL~kaI~~ 76 (105)
..+ +.+.++++.+++|+.+|..+|...++++++|++. | +++|+||.+||.+++..
T Consensus 8 ~~i-m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~ 65 (141)
T 2rih_A 8 SEL-LKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQ 65 (141)
T ss_dssp GGG-CCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHT
T ss_pred HHH-hcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhc
Confidence 445 5678999999999999999999999999999985 5 99999999999998743
No 76
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.47 E-value=2.5e-07 Score=61.64 Aligned_cols=51 Identities=2% Similarity=-0.057 Sum_probs=46.1
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee--CCeEEEEEehHHHHHhhccC
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA--IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~--~GrLVGvVT~kDL~kaI~~~ 77 (105)
..++++.+++|+.+|..+|...++++++|++ .|+++|+||.+||.+++...
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~ 64 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK 64 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc
Confidence 3578999999999999999999999999996 48999999999999988653
No 77
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.47 E-value=2.7e-07 Score=62.15 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=50.5
Q ss_pred ccCCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 18 VSFEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 18 idl~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+..+.+ +.+ .++++.+++|+..|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 11 ~~v~~i-m~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~ 71 (157)
T 2emq_A 11 MTVKPF-LIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILG 71 (157)
T ss_dssp CBSTTT-CEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBC
T ss_pred CcHHhh-ccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhc
Confidence 344556 545 788999999999999999999999999998 7999999999999998754
No 78
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.47 E-value=4.2e-07 Score=59.89 Aligned_cols=52 Identities=13% Similarity=0.027 Sum_probs=47.7
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+...++++.+++|+.+|..+|...++++++|++ +|+++|+||.+|+.+++..
T Consensus 17 ~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 17 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc
Confidence 557789999999999999999999999999998 7999999999999987753
No 79
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.46 E-value=4.3e-07 Score=61.50 Aligned_cols=50 Identities=20% Similarity=0.105 Sum_probs=46.4
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~ 79 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAE 79 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcc
Confidence 6788999999999999999999999999998 7999999999999988753
No 80
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.46 E-value=5.5e-07 Score=61.26 Aligned_cols=53 Identities=21% Similarity=0.222 Sum_probs=48.1
Q ss_pred ccccCCCceEEeccCCHHHHHHHHHHhCCcE-EEEeeCCeEEEEEehHHHHHhhc
Q psy6637 22 QCHIDPAPFQLVERTSLLKVHSIFSLVGVNH-AYVTAIGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 22 ~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~-l~Vt~~GrLVGvVT~kDL~kaI~ 75 (105)
.+ +.+.++++.+++|+.+|..+|...++++ ++|++.++++|+||.+||.+++.
T Consensus 20 ~i-m~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 20 KL-ISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDNKLVGMIPVMHLLKVSG 73 (157)
T ss_dssp TS-SCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETTEEEEEEEHHHHHHHHH
T ss_pred hc-ccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECCEEEEEEEHHHHHHHHh
Confidence 44 5678999999999999999999999999 99999779999999999998753
No 81
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.45 E-value=8e-07 Score=64.72 Aligned_cols=53 Identities=9% Similarity=0.265 Sum_probs=47.2
Q ss_pred CccccCCCceEEeccCCHHHHHHHHHHh---CCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 21 EQCHIDPAPFQLVERTSLLKVHSIFSLV---GVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 21 ~~~~id~sP~qv~~~tsL~kv~~LF~~L---glr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
..+ |.+.++++.+++|+.+|..+|+.. +++++||++ .|+|+|+||.+||.++.
T Consensus 57 ~~i-M~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~~ 113 (205)
T 3kxr_A 57 GRY-TDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKHE 113 (205)
T ss_dssp GGG-CBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTSC
T ss_pred Hhh-ccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhCC
Confidence 345 778899999999999999999987 899999998 79999999999998753
No 82
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.45 E-value=3.2e-07 Score=61.40 Aligned_cols=48 Identities=8% Similarity=-0.055 Sum_probs=44.9
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~ 75 (105)
.++++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++.
T Consensus 14 ~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 14 QMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp GCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGG
T ss_pred HEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHH
Confidence 4689999999999999999999999999985 79999999999999876
No 83
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.44 E-value=3.7e-07 Score=62.10 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=47.5
Q ss_pred cCC--CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 25 IDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+ .++++.+++++.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 20 m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 20 MIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp SEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBC
T ss_pred hCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhh
Confidence 445 789999999999999999999999999997 6899999999999998754
No 84
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.44 E-value=3e-07 Score=62.21 Aligned_cols=50 Identities=14% Similarity=0.178 Sum_probs=45.4
Q ss_pred CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 27 PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 27 ~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 25 ~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp GGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred cCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHh
Confidence 4578999999999999999999999999997 7999999999999988753
No 85
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.44 E-value=5.3e-07 Score=61.96 Aligned_cols=49 Identities=10% Similarity=0.079 Sum_probs=45.6
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 36 ~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 36 DVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp CCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 589999999999999999999999999998 7999999999999987643
No 86
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.43 E-value=5.2e-07 Score=67.80 Aligned_cols=52 Identities=13% Similarity=0.108 Sum_probs=48.2
Q ss_pred CCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 26 DPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 26 d~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.|+++.+++++..|..+|...++++++|++ +|+++|+||..||.+++...
T Consensus 272 ~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 272 FEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp CCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 37899999999999999999999999999998 59999999999999998654
No 87
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.41 E-value=3.6e-07 Score=59.95 Aligned_cols=51 Identities=10% Similarity=0.100 Sum_probs=45.7
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHH-Hhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVR-NDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~-kaI~ 75 (105)
+.+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||. +++.
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (133)
T 1y5h_A 14 MNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLA 66 (133)
T ss_dssp SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGG
T ss_pred hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHh
Confidence 446788999999999999999999999999995 89999999999998 5654
No 88
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.39 E-value=9e-07 Score=61.92 Aligned_cols=56 Identities=13% Similarity=0.086 Sum_probs=50.0
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
....+ +.+.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.+++.
T Consensus 10 ~v~~i-m~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 10 RVEKI-MNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp BGGGT-SBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTG
T ss_pred CHHHh-cCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHh
Confidence 34455 667899999999999999999999999999997 799999999999998865
No 89
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.38 E-value=7.2e-07 Score=67.93 Aligned_cols=57 Identities=7% Similarity=0.046 Sum_probs=50.4
Q ss_pred cCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC---CeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI---GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~---GrLVGvVT~kDL~kaI~~ 76 (105)
--..+ |.+.+++|.+++++.+|..+|...++++++|++. |+|||+||++||.+++..
T Consensus 14 ~v~di-Mt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~ 73 (250)
T 2d4z_A 14 QVGDI-MVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQR 73 (250)
T ss_dssp BTTSS-SBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred ChHHh-cCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHH
Confidence 34456 6678999999999999999999999999999984 789999999999988753
No 90
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.38 E-value=3.9e-07 Score=66.46 Aligned_cols=54 Identities=9% Similarity=0.054 Sum_probs=43.6
Q ss_pred CCccccC-CCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 20 FEQCHID-PAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 20 l~~~~id-~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
.+.+ +. ..|+++.+++++.+|..+|...++++++|++ +|+|+|+||++|+.++.
T Consensus 187 v~~i-m~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 187 VDYV-MTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HHHH-SBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred eeeE-ecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 4445 55 7899999999999999999999999999997 79999999999998875
No 91
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.38 E-value=5.7e-07 Score=62.56 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=44.2
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
..++|.+++|+.+|..+|...|++++||++ .|+++|+||.+|+.+++..
T Consensus 26 ~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~ 75 (156)
T 3k6e_A 26 NLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp SSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHH
T ss_pred HeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhh
Confidence 457899999999999999999999999997 6999999999999887743
No 92
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.34 E-value=3.9e-07 Score=60.22 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=44.4
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEeeC--CeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTAI--GRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~--GrLVGvVT~kDL~kaI~~ 76 (105)
..+++.+++|+.+|..+|...++++++|++. |+++|+||.+||.+++..
T Consensus 17 ~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~ 67 (130)
T 3i8n_A 17 VVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQS 67 (130)
T ss_dssp CCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHT
T ss_pred HEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhc
Confidence 3458999999999999999999999999984 899999999999998753
No 93
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.34 E-value=3.6e-07 Score=62.88 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=43.8
Q ss_pred ceEE--eccCCHHHHHHHHHHhCCcEEEEe---eCCeEEEEEehHHHHHhhc
Q psy6637 29 PFQL--VERTSLLKVHSIFSLVGVNHAYVT---AIGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 29 P~qv--~~~tsL~kv~~LF~~Lglr~l~Vt---~~GrLVGvVT~kDL~kaI~ 75 (105)
|+++ .+++++.+|..+|...++++++|+ +.|+++|+||.+||.+++.
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~ 76 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIE 76 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHH
Confidence 7788 999999999999999999999999 5899999999999998864
No 94
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.29 E-value=7.4e-07 Score=59.00 Aligned_cols=47 Identities=13% Similarity=0.007 Sum_probs=43.7
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
.++++.+++++.+|..+|...++++++|++ +|+++|+||.+||.+++
T Consensus 16 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~ 63 (152)
T 4gqw_A 16 DLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALD 63 (152)
T ss_dssp TCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC
T ss_pred CCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhh
Confidence 688999999999999999999999999998 58999999999998754
No 95
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=98.29 E-value=1.5e-06 Score=64.21 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=48.1
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
+.+.++++.+++++..|..+|...++++++|++ +|+++|+||.+|+.+++.
T Consensus 162 m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 162 MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp SBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 567899999999999999999999999999999 899999999999999875
No 96
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.28 E-value=6.6e-07 Score=61.13 Aligned_cols=47 Identities=19% Similarity=0.017 Sum_probs=43.5
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
.++++.+++|+.+|..+|...++++++|++ +|+++|+||.+||.++.
T Consensus 15 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~ 62 (180)
T 3sl7_A 15 NLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALD 62 (180)
T ss_dssp GCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-
T ss_pred CceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhh
Confidence 688999999999999999999999999998 79999999999998653
No 97
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=98.27 E-value=1.4e-06 Score=65.16 Aligned_cols=53 Identities=13% Similarity=0.029 Sum_probs=48.6
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+.++++.+++++..|..+|...++++++|++ +|+++|+||.+|+.+++...
T Consensus 196 m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~ 249 (323)
T 3t4n_C 196 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGG 249 (323)
T ss_dssp BCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTT
T ss_pred CCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhc
Confidence 457889999999999999999999999999997 69999999999999988654
No 98
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.27 E-value=1.3e-06 Score=63.26 Aligned_cols=51 Identities=14% Similarity=0.114 Sum_probs=47.5
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
+.+.|+++.+++|+.+|..+|...++++++|++ +|+++|+||.+|+.+++.
T Consensus 19 ~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~ 70 (213)
T 1vr9_A 19 VTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL 70 (213)
T ss_dssp CBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT
T ss_pred hcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC
Confidence 667899999999999999999999999999998 899999999999988764
No 99
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=98.23 E-value=1.7e-06 Score=70.74 Aligned_cols=59 Identities=19% Similarity=0.224 Sum_probs=52.7
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
...+.+ +++.|+++.+++++.+|..+|...+++.++|++ +|+++|+||.+|+.+++...
T Consensus 219 ~~v~di-m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 219 TRVAEI-MNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp SBGGGT-SBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred CcHHHH-hCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHHH
Confidence 345556 778899999999999999999999999999998 79999999999999988654
No 100
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=98.21 E-value=2.5e-06 Score=64.84 Aligned_cols=50 Identities=16% Similarity=0.283 Sum_probs=46.0
Q ss_pred cCCCceEEeccCCHHHHHHHHHHh-----CCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLV-----GVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~L-----glr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
+.+.++++.+++++.+|..+|+.. +++++||++ +|+++|+||.+||.++.
T Consensus 143 M~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~~ 198 (286)
T 2oux_A 143 MTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVND 198 (286)
T ss_dssp CBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTSC
T ss_pred CCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcCC
Confidence 678899999999999999999998 889999998 79999999999998763
No 101
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=98.16 E-value=1.1e-05 Score=60.62 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=46.5
Q ss_pred ccccCCCceEEeccCCHHHHHHHHHHh-----CCcEEEEee-CCeEEEEEehHHHHHh
Q psy6637 22 QCHIDPAPFQLVERTSLLKVHSIFSLV-----GVNHAYVTA-IGRLVGVVGLKEVRND 73 (105)
Q Consensus 22 ~~~id~sP~qv~~~tsL~kv~~LF~~L-----glr~l~Vt~-~GrLVGvVT~kDL~ka 73 (105)
.+ |.+.++++.+++++..|..+|+.. ++.++||++ .|+++|+||.+|+..+
T Consensus 139 ~i-M~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~ 195 (278)
T 2yvy_A 139 GL-MTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 195 (278)
T ss_dssp GT-CBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS
T ss_pred hh-cCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC
Confidence 35 678899999999999999999998 799999998 7999999999999875
No 102
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=98.15 E-value=3.8e-06 Score=63.02 Aligned_cols=52 Identities=12% Similarity=0.010 Sum_probs=48.3
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+.++++.+++++.+|..+|...++++++|++ +|+++|+||.+||.+++..
T Consensus 191 m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 191 TWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTT
T ss_pred ccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhc
Confidence 568899999999999999999999999999998 6999999999999998754
No 103
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=98.15 E-value=2.8e-06 Score=63.79 Aligned_cols=51 Identities=12% Similarity=-0.005 Sum_probs=47.3
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee--CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA--IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~--~GrLVGvVT~kDL~kaI~ 75 (105)
+.+.++++.+++++.+|..+|...++++++|++ +|+++|+||.+|+.+++.
T Consensus 124 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~ 176 (330)
T 2v8q_E 124 SFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLK 176 (330)
T ss_dssp SCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHH
T ss_pred ccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHH
Confidence 357789999999999999999999999999998 799999999999999874
No 104
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=98.14 E-value=6.1e-06 Score=60.00 Aligned_cols=56 Identities=13% Similarity=0.120 Sum_probs=48.5
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHH-hhcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRN-DSHL 76 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~k-aI~~ 76 (105)
.+.+ +.+.++++.+++++.+|..+|...++++++|++ +|+++|+||.+|+.+ ++..
T Consensus 62 v~~~-m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 62 LAML-VKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp --CC-CBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT
T ss_pred HHHH-cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc
Confidence 3445 556789999999999999999999999999998 589999999999998 7754
No 105
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=98.12 E-value=3.6e-06 Score=69.16 Aligned_cols=55 Identities=18% Similarity=0.243 Sum_probs=49.6
Q ss_pred CCccccCCCceEEecc-CCHHHHHHHHHHhCCcEEEEee--CCeEEEEEehHHHHHhhc
Q psy6637 20 FEQCHIDPAPFQLVER-TSLLKVHSIFSLVGVNHAYVTA--IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 20 l~~~~id~sP~qv~~~-tsL~kv~~LF~~Lglr~l~Vt~--~GrLVGvVT~kDL~kaI~ 75 (105)
.+.+ |.+.|+++.++ +|+.+|..+|...++++++|++ +|+++||||.+||++++.
T Consensus 386 V~di-M~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~ 443 (527)
T 3pc3_A 386 IAEL-ELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIV 443 (527)
T ss_dssp GGGG-CCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHH
T ss_pred HHHh-CcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHH
Confidence 3445 56789999999 9999999999999999999998 899999999999998774
No 106
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.02 E-value=1.3e-05 Score=64.89 Aligned_cols=57 Identities=14% Similarity=0.223 Sum_probs=50.7
Q ss_pred cCCccccCC-CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 19 SFEQCHIDP-APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 19 dl~~~~id~-sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.++.+ +.+ .|+++.+++++.++..+|...++++++|++ +|+++|+||++|+.+++..
T Consensus 153 ~v~~i-m~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 153 PISEH-MTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp BTTTS-CCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred cHHHH-cCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 34445 555 789999999999999999999999999998 8999999999999998864
No 107
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.94 E-value=1.7e-05 Score=65.90 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=48.2
Q ss_pred cCC-CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 25 IDP-APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 25 id~-sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
+.+ .|+++.+++++.++..+|...+++.++|++ +|+|+|+||.+|+.+++..
T Consensus 181 M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 181 MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 444 889999999999999999999999999998 8999999999999999865
No 108
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.90 E-value=1.6e-05 Score=64.35 Aligned_cols=55 Identities=15% Similarity=0.209 Sum_probs=49.1
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee---CCeEEEEEehHHHHHh
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA---IGRLVGVVGLKEVRND 73 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~---~GrLVGvVT~kDL~ka 73 (105)
..++.. +.+.++++.+++++.++..+|...+.++++|++ +|+++|+||.+||+++
T Consensus 90 ~~~~~i-m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~ 147 (491)
T 1zfj_A 90 KRSENG-VIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI 147 (491)
T ss_dssp HHHTTT-TSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC
T ss_pred hhHHhc-CcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh
Confidence 344556 678899999999999999999999999999997 8999999999999874
No 109
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.85 E-value=4.9e-05 Score=62.11 Aligned_cols=62 Identities=21% Similarity=0.321 Sum_probs=51.3
Q ss_pred HHHhcCcccCC-----ccccCCCceEEeccCCHHHHHHHHHHh-----CCcEEEEee-CCeEEEEEehHHHHHh
Q psy6637 11 EEEMGQKVSFE-----QCHIDPAPFQLVERTSLLKVHSIFSLV-----GVNHAYVTA-IGRLVGVVGLKEVRND 73 (105)
Q Consensus 11 ~~~l~~~idl~-----~~~id~sP~qv~~~tsL~kv~~LF~~L-----glr~l~Vt~-~GrLVGvVT~kDL~ka 73 (105)
.+++.+.+.+. .+ +.+.++++.+++++.+|...|+.. +++++||++ +|+++|+||.+|+.++
T Consensus 143 ~~~i~~~l~~~~~~v~~i-M~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~ 215 (473)
T 2zy9_A 143 RAEVEALARYEEDEAGGL-MTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA 215 (473)
T ss_dssp HHHHHHHHTSCTTBSTTT-CBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS
T ss_pred HHHHHHHhcCCCCCHHHh-CCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC
Confidence 34444445554 45 778899999999999999999987 489999998 6999999999999875
No 110
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.85 E-value=1.8e-05 Score=65.00 Aligned_cols=57 Identities=11% Similarity=0.019 Sum_probs=48.6
Q ss_pred ccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC-----CeEEEEEehHHHHHhhccC
Q psy6637 18 VSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI-----GRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 18 idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~-----GrLVGvVT~kDL~kaI~~~ 77 (105)
...+.+ +.+.++++.+++++.+|..+|...++ ++|++. |+++||||+.||++++...
T Consensus 451 ~~V~~i-m~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 451 DPAIKA-LNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp SBGGGG-EETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred CcHHHH-hcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 345566 77889999999999999999977665 688876 9999999999999999665
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.81 E-value=3.5e-05 Score=63.75 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=49.4
Q ss_pred HhcCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHH
Q psy6637 13 EMGQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRN 72 (105)
Q Consensus 13 ~l~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~k 72 (105)
++......+.. +...|+++.+++++.+|..++...+.+++||++ +|+|+||||.+||+.
T Consensus 84 ~V~~Vk~~~~~-m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~ 143 (496)
T 4fxs_A 84 QVHQVKIFEAG-VVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRF 143 (496)
T ss_dssp HHHHHHHCCC---CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTT
T ss_pred HHHhccccccc-cccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhh
Confidence 33334455666 558899999999999999999999999999998 899999999999973
No 112
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.79 E-value=3.4e-05 Score=64.02 Aligned_cols=57 Identities=16% Similarity=0.246 Sum_probs=49.3
Q ss_pred cCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee---CCeEEEEEehHHHHH
Q psy6637 15 GQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA---IGRLVGVVGLKEVRN 72 (105)
Q Consensus 15 ~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~---~GrLVGvVT~kDL~k 72 (105)
.+....+.. +.+.|+++.+++|+.++..++...+++++||++ +|+|+|+||.+||+.
T Consensus 110 ~~V~~~~~~-m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~ 169 (511)
T 3usb_A 110 DKVKRSESG-VISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF 169 (511)
T ss_dssp HHHHTSSSC-SSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT
T ss_pred HHhhccccc-cccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh
Confidence 333445555 667899999999999999999999999999998 689999999999975
No 113
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.74 E-value=5.4e-06 Score=67.47 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=6.9
Q ss_pred ChHHHHhHHHHHhcCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHH
Q psy6637 2 SPEDQKKWEEEEMGQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRN 72 (105)
Q Consensus 2 ~~~e~~~we~~~l~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~k 72 (105)
+++++.. ++.....++.. +.+.|+++.+++++.+|..+|...++++++|++ +|+|+|+||.+||++
T Consensus 83 ~~e~~~~----~v~~v~~~~~i-M~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 83 TPDEQAR----QVSIVKKTENG-IIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRF 149 (494)
T ss_dssp CHHHHHH----HHHHHHTC-----------------------------------------------------
T ss_pred ChHHHHH----HHHhhhhHhhc-CccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHh
Confidence 5555433 23334456666 567899999999999999999999999999998 689999999999976
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.71 E-value=4.9e-06 Score=68.63 Aligned_cols=57 Identities=14% Similarity=0.030 Sum_probs=0.4
Q ss_pred CCccccCCC--ceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDPA--PFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~s--P~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.+ +.+. |+++.+++++.+|..+|...++++++|++ +|+|+|+||.+||.+++...
T Consensus 163 V~di-M~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 163 VSDM-MTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp ------------------------------------------------------------C
T ss_pred HHHH-hCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcc
Confidence 3445 5566 99999999999999999999999999998 89999999999999988644
No 115
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.70 E-value=5.6e-06 Score=67.39 Aligned_cols=57 Identities=16% Similarity=0.226 Sum_probs=6.0
Q ss_pred CCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 20 FEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 20 l~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
.+.+ +.+ .|+++.+++++.+|..+|...++++++|++ +|+|+|+||++|+.+++...
T Consensus 157 v~~i-m~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 157 IKDL-MTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------------------------------------CHHHHTCT
T ss_pred HHHH-hCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 4445 556 899999999999999999999999999998 89999999999999988543
No 116
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.66 E-value=1.2e-05 Score=66.05 Aligned_cols=68 Identities=22% Similarity=0.199 Sum_probs=32.6
Q ss_pred CChHHHHhHHHHHhcCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC----CeEEEEEehHHHHHh
Q psy6637 1 MSPEDQKKWEEEEMGQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI----GRLVGVVGLKEVRND 73 (105)
Q Consensus 1 ~~~~e~~~we~~~l~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~----GrLVGvVT~kDL~ka 73 (105)
++|+++.+.-. .....+.. +-+.|+++.+++++.+|..+|...+++.+||++. |+|+|+||.+||+++
T Consensus 95 ~t~e~~~~~v~----~v~~~~~i-m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 95 CTPEFQANEVR----KVKNFEQG-FITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp SCHHHHHHHHH----HHHTCCTT-SCSSCCCCCC-----------------CEESCC--------CCEECTTTTC--
T ss_pred CCHHHHHHHHH----hhhhhhhc-cccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhh
Confidence 36777654322 22245555 4467999999999999999999999999999986 899999999999764
No 117
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.61 E-value=8.2e-06 Score=66.71 Aligned_cols=56 Identities=13% Similarity=0.221 Sum_probs=1.0
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
++.+ +.+.|+++.+++++.++..+|...+++.++|++ +|+++|+||++||.++++.
T Consensus 152 v~~i-m~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~ 208 (486)
T 2cu0_A 152 VKEL-MTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKY 208 (486)
T ss_dssp --------------------------------------------------------CC
T ss_pred HHHH-ccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhc
Confidence 3444 555789999999999999999999999999998 7999999999999998763
No 118
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.61 E-value=9.3e-06 Score=67.03 Aligned_cols=56 Identities=21% Similarity=0.302 Sum_probs=3.6
Q ss_pred CcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHH
Q psy6637 16 QKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRN 72 (105)
Q Consensus 16 ~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~k 72 (105)
....++.. +...|+++.+++++.+|..+|...++++++|+++|+|+||||.+||+.
T Consensus 86 ~vk~~~~~-m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd~g~lvGIVt~rDl~~ 141 (490)
T 4avf_A 86 KVKKHETA-IVRDPVTVTPSTKIIELLQMAREYGFSGFPVVEQGELVGIVTGRDLRV 141 (490)
T ss_dssp HHHHCCC--------------------------------------------------
T ss_pred hhcccccC-cccCceEeCCCCcHHHHHHHHHHhCCCEEEEEECCEEEEEEEhHHhhh
Confidence 33455666 557899999999999999999999999999999999999999999964
No 119
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.58 E-value=9.4e-06 Score=66.99 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=0.4
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.|+++.+++++.+|..+|...++++++|++ +|+|+|+||++|+.+++..
T Consensus 158 ~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 158 KLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp -------------------------------------------------C
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhccC
Confidence 599999999999999999999999999998 8999999999999998643
No 120
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.55 E-value=3.9e-06 Score=68.83 Aligned_cols=56 Identities=9% Similarity=0.207 Sum_probs=43.0
Q ss_pred CCccccCC--CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 20 FEQCHIDP--APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 20 l~~~~id~--sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
++.+ +.+ .++++.+++++.+|..+|...++++++|++ +|+|+|+||++|+.+++..
T Consensus 175 v~~v-m~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 175 LSEV-MTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp -------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCC
T ss_pred HHHH-hCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhC
Confidence 3445 666 899999999999999999999999999997 8999999999999988754
No 121
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.46 E-value=1.3e-05 Score=66.43 Aligned_cols=49 Identities=14% Similarity=0.093 Sum_probs=34.3
Q ss_pred CceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 28 APFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 28 sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
.|+++.+++++.++..+|...++++++|++ +|+|+|+||++|+.++...
T Consensus 160 ~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~~~ 209 (496)
T 4fxs_A 160 RLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAESK 209 (496)
T ss_dssp GCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----CCC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhhcc
Confidence 489999999999999999999999999998 7999999999999997653
No 122
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.44 E-value=5.2e-05 Score=63.91 Aligned_cols=53 Identities=15% Similarity=0.155 Sum_probs=47.6
Q ss_pred cC--CCceEEeccCCHHHHHHHHH-HhCCcEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 25 ID--PAPFQLVERTSLLKVHSIFS-LVGVNHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 25 id--~sP~qv~~~tsL~kv~~LF~-~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
|. +.+.++.+++|+.++..+|+ ..+.++++|++ +|+++|+||++||.+++...
T Consensus 459 M~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~ 515 (632)
T 3org_A 459 MHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHV 515 (632)
T ss_dssp CBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC
T ss_pred hhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHH
Confidence 55 56789999999999999999 79999999998 79999999999999987543
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.39 E-value=3e-05 Score=66.25 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=1.4
Q ss_pred CCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC----CeEEEEEehHHHHH
Q psy6637 20 FEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI----GRLVGVVGLKEVRN 72 (105)
Q Consensus 20 l~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~----GrLVGvVT~kDL~k 72 (105)
+++- +...|++|.|+.++..|..|+...++.-++|++. |+||||||.+|++-
T Consensus 140 ~e~g-~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf 195 (556)
T 4af0_A 140 YENG-FITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQF 195 (556)
T ss_dssp CCC------------------------------------------------------
T ss_pred cccC-ccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEecccccc
Confidence 4444 5577999999999999999999999999999984 69999999999854
No 124
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.29 E-value=3.6e-05 Score=63.45 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=0.0
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeC----CeEEEEEehHHHHHh
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAI----GRLVGVVGLKEVRND 73 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~----GrLVGvVT~kDL~ka 73 (105)
+.+.|++|.+++|+.+|..+|...+++++||++. |+|+|+||.+||+++
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~ 155 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID 155 (503)
T ss_dssp -----------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh
Confidence 4568999999999999999999999999999986 799999999999863
No 125
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.16 E-value=8.3e-05 Score=63.52 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=0.0
Q ss_pred cCCCceEEeccCCHHHHHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 25 IDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 25 id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
+-+-++++.+.+++.+|..+|...++..++|++ +|+|+|+||.||+.++..
T Consensus 206 MT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 206 MTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------------------
T ss_pred cccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 445688999999999999999999999999997 899999999999988653
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.15 E-value=7.8e-05 Score=60.90 Aligned_cols=60 Identities=13% Similarity=0.163 Sum_probs=5.1
Q ss_pred HHhcCcccCCccccCCCceEEeccCCHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHH
Q psy6637 12 EEMGQKVSFEQCHIDPAPFQLVERTSLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRN 72 (105)
Q Consensus 12 ~~l~~~idl~~~~id~sP~qv~~~tsL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~k 72 (105)
+++.....++.. +...++++.+++++.++..+|...+.++++|++.|+++|+||.+||+.
T Consensus 87 ~~I~~v~~~~~~-m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~~~lvGivt~~Dl~~ 146 (486)
T 2cu0_A 87 EQVKRVKRAERL-IVEDVITIAPDETVDFALFLMEKHGIDGLPVVEDEKVVGIITKKDIAA 146 (486)
T ss_dssp HHHHHHHTCC---------------------------------------------------
T ss_pred HHHHhhcchhhc-cccCceEECCCCCHHHHHHHHHHcCCcEEEEEECCEEEEEEEHHHhcc
Confidence 344444556665 668899999999999999999999999999999999999999999874
No 127
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=75.46 E-value=2 Score=30.28 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHHHH
Q psy6637 38 LLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEVRN 72 (105)
Q Consensus 38 L~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL~k 72 (105)
+.....-+...|-.-+||..+|+++|+|..+|-.|
T Consensus 121 ~~~~~~~la~~G~T~v~VA~d~~l~GvIalaD~iK 155 (156)
T 1svj_A 121 VDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK 155 (156)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTEEEEEEEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEEEECCEEEEEEEEecCCC
Confidence 44445556788989999999999999999888543
No 128
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=56.71 E-value=33 Score=22.84 Aligned_cols=42 Identities=10% Similarity=0.021 Sum_probs=27.7
Q ss_pred HHHHHHHHHHhCCc------------EEEEee-CCeEEEE-----EehHHHHHhhccCch
Q psy6637 38 LLKVHSIFSLVGVN------------HAYVTA-IGRLVGV-----VGLKEVRNDSHLSSV 79 (105)
Q Consensus 38 L~kv~~LF~~Lglr------------~l~Vt~-~GrLVGv-----VT~kDL~kaI~~~~~ 79 (105)
-.....+.+..|++ ..||.+ +|+++++ ...++|.++|.....
T Consensus 103 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 103 SEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 34556666665543 466776 9999998 456778887766533
No 129
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=45.34 E-value=9.6 Score=26.72 Aligned_cols=15 Identities=27% Similarity=0.124 Sum_probs=11.9
Q ss_pred EEee-CCeEEEEEehH
Q psy6637 54 YVTA-IGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~k 68 (105)
++.+ +|+||||+|+.
T Consensus 161 Plv~~~g~lvGI~s~g 176 (210)
T 2as9_A 161 PVLNSNNEVIGVVYGG 176 (210)
T ss_dssp EEECTTSCEEEEECCS
T ss_pred cEECCCCeEEEEEecc
Confidence 4444 89999999985
No 130
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=44.13 E-value=21 Score=20.41 Aligned_cols=36 Identities=6% Similarity=-0.158 Sum_probs=25.5
Q ss_pred HHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhcc
Q psy6637 41 VHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSHL 76 (105)
Q Consensus 41 v~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~~ 76 (105)
....+...|.+.+|++- +|+.+|-.+..+|.+++..
T Consensus 39 ~~~~~~~~g~~~vP~~~~~g~~~~g~~~~~l~~~l~~ 75 (81)
T 1h75_A 39 AAEALRAQGFRQLPVVIAGDLSWSGFRPDMINRLHPA 75 (81)
T ss_dssp HHHHHHHTTCCSSCEEEETTEEEESCCHHHHGGGSCC
T ss_pred HHHHHHHhCCCccCEEEECCEEEecCCHHHHHHHHhc
Confidence 34455667888887654 7888877788887777753
No 131
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=42.86 E-value=35 Score=18.93 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=23.7
Q ss_pred HHHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhh
Q psy6637 41 VHSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 41 v~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
....|...|.+.+|++- +|+.+|=.+..++.+++
T Consensus 39 ~~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~~l 73 (75)
T 1r7h_A 39 ARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQLQ 73 (75)
T ss_dssp HHHHHHHTTCBCCCEEEETTEEEESCCHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEECCeEEcCCCHHHHHHHH
Confidence 33445678888888764 78877656777777766
No 132
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=42.32 E-value=12 Score=25.59 Aligned_cols=16 Identities=19% Similarity=0.171 Sum_probs=12.2
Q ss_pred EEee-CCeEEEEEehHH
Q psy6637 54 YVTA-IGRLVGVVGLKE 69 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~kD 69 (105)
++.+ +|+||||+|+..
T Consensus 157 Pl~~~~g~lvGI~s~g~ 173 (200)
T 2w7s_A 157 PVLNSKHELIGILYAGS 173 (200)
T ss_dssp EEECTTSCEEEEEEEEC
T ss_pred eEECcCCEEEEEEeccc
Confidence 4444 799999999863
No 133
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=41.47 E-value=14 Score=26.26 Aligned_cols=15 Identities=33% Similarity=0.388 Sum_probs=11.7
Q ss_pred EEee-CCeEEEEEehH
Q psy6637 54 YVTA-IGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~k 68 (105)
++.+ +|+||||+|+.
T Consensus 198 Pl~~~~g~lvGI~s~g 213 (242)
T 1agj_A 198 GIFNSNGELVGIHSSK 213 (242)
T ss_dssp EEECTTSEEEEEEEEE
T ss_pred HhcccCCEEEEEEecc
Confidence 4444 79999999985
No 134
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=38.95 E-value=11 Score=27.25 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=12.0
Q ss_pred EEe-eCCeEEEEEehH
Q psy6637 54 YVT-AIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt-~~GrLVGvVT~k 68 (105)
++. .+|+||||+|++
T Consensus 192 PLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 192 PLVNLDGEVIGINTLK 207 (231)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred HeecCCCeEEEEEeEE
Confidence 455 489999999985
No 135
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=38.71 E-value=37 Score=24.13 Aligned_cols=24 Identities=17% Similarity=0.315 Sum_probs=19.7
Q ss_pred HHhCCcEEEEeeCCeEEEEEehHH
Q psy6637 46 SLVGVNHAYVTAIGRLVGVVGLKE 69 (105)
Q Consensus 46 ~~Lglr~l~Vt~~GrLVGvVT~kD 69 (105)
...|-..+||.-+|+++|+|+..|
T Consensus 161 ~~~G~T~V~vaidg~l~g~iavaD 184 (185)
T 2kmv_A 161 ERKGRTAVLVAVDDELCGLIAIAD 184 (185)
T ss_dssp HHTTCEEEEEEETTEEEEEEEEEC
T ss_pred HhCCCeEEEEEECCEEEEEEEEEc
Confidence 445767889999999999998765
No 136
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=38.69 E-value=33 Score=23.60 Aligned_cols=24 Identities=21% Similarity=0.421 Sum_probs=19.3
Q ss_pred HHhCCcEEEEeeCCeEEEEEehHH
Q psy6637 46 SLVGVNHAYVTAIGRLVGVVGLKE 69 (105)
Q Consensus 46 ~~Lglr~l~Vt~~GrLVGvVT~kD 69 (105)
...|-..+||..+|+++|+|+..|
T Consensus 142 ~~~G~T~v~va~dg~~~g~i~l~D 165 (165)
T 2arf_A 142 EMKGQTAILVAIDGVLCGMIAIAD 165 (165)
T ss_dssp HTTTSEEEEEEETTEEEEEEEECC
T ss_pred HhCCCeEEEEEECCEEEEEEEEEC
Confidence 345667889999999999998654
No 137
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=38.69 E-value=15 Score=24.91 Aligned_cols=16 Identities=25% Similarity=0.173 Sum_probs=12.3
Q ss_pred EEee-CCeEEEEEehHH
Q psy6637 54 YVTA-IGRLVGVVGLKE 69 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~kD 69 (105)
++.+ +|+||||+++..
T Consensus 160 Pl~~~~g~lvGI~s~g~ 176 (204)
T 2vid_A 160 PVLNSNNELVGIHFASD 176 (204)
T ss_dssp EEECTTSCEEEEEEEEC
T ss_pred cEECCCCeEEEEEecCc
Confidence 4444 899999999863
No 138
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=38.41 E-value=29 Score=23.56 Aligned_cols=27 Identities=15% Similarity=0.133 Sum_probs=22.5
Q ss_pred HHHHHHhCCcEEEEee---CCeEEEEEehH
Q psy6637 42 HSIFSLVGVNHAYVTA---IGRLVGVVGLK 68 (105)
Q Consensus 42 ~~LF~~Lglr~l~Vt~---~GrLVGvVT~k 68 (105)
..+++.+|++..+++. +|+|.|++.-.
T Consensus 96 ~~~l~~~~v~S~L~vPi~~~~~l~GlL~~~ 125 (171)
T 4glq_A 96 LNQLRPLKVRANLVVPMVIDDQLFGLLIAH 125 (171)
T ss_dssp HHHHGGGTEEEEEEEEEEETTEEEEEEEEE
T ss_pred HHHHHhcCCcEEEEEEEEECCEEEEEEEEE
Confidence 5688999999887774 99999999753
No 139
>2lb5_A Sensor histidine kinase; PCB, transferase, GAF domain, phosphoprotein; HET: CYC; NMR {Synechococcus SP} PDB: 2lb9_A*
Probab=37.73 E-value=50 Score=22.05 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=20.3
Q ss_pred HHHHHHhCCcEEEEe---eCCeEEEEEeh
Q psy6637 42 HSIFSLVGVNHAYVT---AIGRLVGVVGL 67 (105)
Q Consensus 42 ~~LF~~Lglr~l~Vt---~~GrLVGvVT~ 67 (105)
...+...|++..+++ .+|+++|++..
T Consensus 140 ~~~l~~~~~~S~l~vPi~~~~~l~GvL~~ 168 (208)
T 2lb5_A 140 VHYLKSMGVASSLVVPLMHHQELWGLLVS 168 (208)
T ss_dssp HHHHHHTTCSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcCCcEEEEEEEEECCEeEEEEEE
Confidence 556778899886555 69999999964
No 140
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=37.44 E-value=16 Score=26.22 Aligned_cols=16 Identities=25% Similarity=0.308 Sum_probs=12.6
Q ss_pred EEee-CCeEEEEEehHH
Q psy6637 54 YVTA-IGRLVGVVGLKE 69 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~kD 69 (105)
++.+ +|+||||+|+.-
T Consensus 189 Plv~~~g~lvGI~s~g~ 205 (246)
T 1qtf_A 189 GIFNLKGELIGIHSGKG 205 (246)
T ss_dssp EEECTTCCEEEEEEEEE
T ss_pred heECCCCEEEEEEeccc
Confidence 4544 899999999863
No 141
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=37.39 E-value=67 Score=19.38 Aligned_cols=32 Identities=22% Similarity=0.099 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHhCCcEEEEeeCCeEEEEEehH
Q psy6637 37 SLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 37 sL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~k 68 (105)
+.......+..-.-....+..+|++||.+...
T Consensus 37 ~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~ 68 (166)
T 1cjw_A 37 NLDEVQHFLTLCPELSLGWFVEGRLVAFIIGS 68 (166)
T ss_dssp CHHHHHHHHHHCGGGEEEEEETTEEEEEEEEE
T ss_pred CHHHHHHHHhcCCCcEEEEEECCeEEEEEEee
Confidence 44555555554333455555799999998754
No 142
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=37.27 E-value=37 Score=22.60 Aligned_cols=15 Identities=13% Similarity=0.003 Sum_probs=12.2
Q ss_pred cEEEEee-CCeEEEEE
Q psy6637 51 NHAYVTA-IGRLVGVV 65 (105)
Q Consensus 51 r~l~Vt~-~GrLVGvV 65 (105)
...||.+ +|+++...
T Consensus 130 p~~~lid~~G~I~~~~ 145 (175)
T 1xvq_A 130 RAIVVIGADGNVAYTE 145 (175)
T ss_dssp SEEEEECTTSBEEEEE
T ss_pred ceEEEECCCCeEEEEE
Confidence 4677776 99999987
No 143
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=36.44 E-value=27 Score=22.34 Aligned_cols=27 Identities=11% Similarity=0.100 Sum_probs=19.6
Q ss_pred cEEEEee-CCeEEEEEehHHHHHhhccC
Q psy6637 51 NHAYVTA-IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 51 r~l~Vt~-~GrLVGvVT~kDL~kaI~~~ 77 (105)
+.+-|++ +|..+||++.+|-++.....
T Consensus 14 ~eVrli~~~Ge~lGv~~~~eAl~~A~e~ 41 (78)
T 1tif_A 14 REVRLIDQNGDQLGIKSKQEALEIAARR 41 (78)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHHHHHT
T ss_pred CEEEEECCCCcCCCcccHHHHHHHHHHc
Confidence 4454554 99999999999976655443
No 144
>3hfo_A SSR3341 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 1.30A {Synechocystis SP}
Probab=36.40 E-value=25 Score=22.16 Aligned_cols=34 Identities=12% Similarity=0.094 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHhCCcEEEEeeCCeEEEEEehHHH
Q psy6637 37 SLLKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEV 70 (105)
Q Consensus 37 sL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL 70 (105)
|+.++.++.+.-..=.++.+.+-+|.|.|.|.|-
T Consensus 10 svR~lQ~~ik~k~~V~I~L~tG~~l~G~i~WQD~ 43 (70)
T 3hfo_A 10 SVRQVQLLIKDQTPVEIKLLTGDSLFGTIRWQDT 43 (70)
T ss_dssp HHHHHHHHHHHTCEEEEEETTSCEEEEEEEEECS
T ss_pred cHHHHHHHHhhCceEEEEecCCCEEEEEEEEeCC
Confidence 3445566777766667788889999999999984
No 145
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=36.27 E-value=25 Score=23.22 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=15.0
Q ss_pred EEEee-CCeEEEEEehHHHHHhh
Q psy6637 53 AYVTA-IGRLVGVVGLKEVRNDS 74 (105)
Q Consensus 53 l~Vt~-~GrLVGvVT~kDL~kaI 74 (105)
+||.+ +|+++|+|+-+-....+
T Consensus 111 ~PV~~~~g~viGvv~vg~~~~~~ 133 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGLELSRV 133 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEHHHH
T ss_pred EeEEcCCCCEEEEEEEeEEHHHH
Confidence 46665 79999999865544333
No 146
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=42.39 E-value=7.6 Score=20.42 Aligned_cols=13 Identities=23% Similarity=0.115 Sum_probs=10.0
Q ss_pred cCCcCCcchhhhh
Q psy6637 87 ADGLGEGQWNAQE 99 (105)
Q Consensus 87 ~~~~~e~~~~~~~ 99 (105)
+-+-+|++||+|+
T Consensus 11 dKKRser~~n~q~ 23 (26)
T 2lsj_B 11 DKKRSERISNCQD 23 (26)
Confidence 3456799999986
No 147
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=35.87 E-value=20 Score=23.72 Aligned_cols=11 Identities=18% Similarity=0.250 Sum_probs=9.4
Q ss_pred CCeEEEEEehH
Q psy6637 58 IGRLVGVVGLK 68 (105)
Q Consensus 58 ~GrLVGvVT~k 68 (105)
.|+|+||+|+.
T Consensus 111 ~g~l~Gi~S~g 121 (152)
T 2pka_B 111 NGMWQGITSWG 121 (152)
T ss_dssp TTEEEEEECCC
T ss_pred CCEEEEEEecC
Confidence 47899999986
No 148
>3ci6_A Phosphoenolpyruvate-protein phosphotransferase; PEP-phosphotransferase, GAF domain, structura genomics, PSI-2, protein structure initiative; HET: MSE P4G; 1.55A {Acinetobacter SP}
Probab=35.34 E-value=34 Score=20.95 Aligned_cols=23 Identities=17% Similarity=0.086 Sum_probs=14.9
Q ss_pred HHhCCcE---EEEeeCCeEEEEEehH
Q psy6637 46 SLVGVNH---AYVTAIGRLVGVVGLK 68 (105)
Q Consensus 46 ~~Lglr~---l~Vt~~GrLVGvVT~k 68 (105)
...|++. +|+..+|+++|++..-
T Consensus 110 ~~~~~~s~l~vPl~~~~~~~Gvl~l~ 135 (171)
T 3ci6_A 110 GEEIYNSFLGVPVMYRRKVMGVLVVQ 135 (171)
T ss_dssp ---CCCEEEEEEEEETTEEEEEEEEE
T ss_pred cccccceEEEEeEEECCEEEEEEEEe
Confidence 4455554 5666799999999753
No 149
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=34.55 E-value=16 Score=26.23 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=12.2
Q ss_pred EEEee-CCeEEEEEehH
Q psy6637 53 AYVTA-IGRLVGVVGLK 68 (105)
Q Consensus 53 l~Vt~-~GrLVGvVT~k 68 (105)
-++.+ +|+||||+|+.
T Consensus 178 GPlv~~~G~vvGI~s~~ 194 (237)
T 3lgi_A 178 GALVNSLGELMGINTLS 194 (237)
T ss_dssp CEEECTTCCEEEEECCC
T ss_pred HHeeCCCCeEEEEEeee
Confidence 34554 89999999983
No 150
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=34.51 E-value=40 Score=21.36 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=25.2
Q ss_pred HHHHHHHhCCcEEEEe-eCCeEEEE-EehHHHHHhhccC
Q psy6637 41 VHSIFSLVGVNHAYVT-AIGRLVGV-VGLKEVRNDSHLS 77 (105)
Q Consensus 41 v~~LF~~Lglr~l~Vt-~~GrLVGv-VT~kDL~kaI~~~ 77 (105)
+...|...++...++. .+|++++. ++..+|.++|...
T Consensus 101 ~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~l~~~l~~l 139 (152)
T 2lrn_A 101 VLESYCIVGFPHIILVDPEGKIVAKELRGDDLYNTVEKF 139 (152)
T ss_dssp HHHHTTCCSSCEEEEECTTSEEEEECCCTTHHHHHHHHH
T ss_pred HHHHhCCCcCCeEEEECCCCeEEEeeCCHHHHHHHHHHH
Confidence 3344444456677777 48999998 6888887776543
No 151
>3trc_A Phosphoenolpyruvate-protein phosphotransferase; signal transduction; HET: MSE; 1.65A {Coxiella burnetii}
Probab=34.12 E-value=35 Score=21.24 Aligned_cols=20 Identities=15% Similarity=0.291 Sum_probs=14.8
Q ss_pred hCCcE---EEEeeCCeEEEEEeh
Q psy6637 48 VGVNH---AYVTAIGRLVGVVGL 67 (105)
Q Consensus 48 Lglr~---l~Vt~~GrLVGvVT~ 67 (105)
.+++. +|+...|+++|++..
T Consensus 110 ~~~~s~l~vPl~~~~~~~Gvl~~ 132 (171)
T 3trc_A 110 EDYHGFLGIPIIEQGELLGILVI 132 (171)
T ss_dssp CCCCEEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEEEeEEECCEEEEEEEE
Confidence 44454 566789999999975
No 152
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=33.65 E-value=30 Score=22.34 Aligned_cols=20 Identities=15% Similarity=0.408 Sum_probs=13.9
Q ss_pred EEEee-CCeEEEEEehHHHHH
Q psy6637 53 AYVTA-IGRLVGVVGLKEVRN 72 (105)
Q Consensus 53 l~Vt~-~GrLVGvVT~kDL~k 72 (105)
.||.+ +|+++|+|+-+-.+.
T Consensus 106 ~PV~~~~g~viGvv~vg~~l~ 126 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGYTIE 126 (131)
T ss_dssp EEEECTTCCEEEEEEEEEEGG
T ss_pred EeEECCCCCEEEEEEEEEEhH
Confidence 45665 799999998654433
No 153
>1qhk_A RNAse HI, protein (ribonuclease HI); ribonuclease HI N-terminal domain, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.100.1.2
Probab=33.55 E-value=27 Score=19.96 Aligned_cols=25 Identities=24% Similarity=0.310 Sum_probs=20.8
Q ss_pred EEEeeCCeEEEEE-ehHHHHHhhccC
Q psy6637 53 AYVTAIGRLVGVV-GLKEVRNDSHLS 77 (105)
Q Consensus 53 l~Vt~~GrLVGvV-T~kDL~kaI~~~ 77 (105)
-|++..|+-.||. ||.|-.+.+.+-
T Consensus 3 yYaV~~G~~~GIy~sW~ec~~qV~g~ 28 (47)
T 1qhk_A 3 FYAVRKGRETGIYNTWNECKNQVDGY 28 (47)
T ss_dssp EEEECSSSSCEEEEEHHHHHHHSSSC
T ss_pred EEEEEeCCCCceECCHHHHHHHhcCC
Confidence 4788899999999 688888887664
No 154
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=33.33 E-value=15 Score=26.19 Aligned_cols=15 Identities=27% Similarity=0.226 Sum_probs=11.9
Q ss_pred EEee-CCeEEEEEehH
Q psy6637 54 YVTA-IGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~k 68 (105)
++.+ +|+||||++.+
T Consensus 186 PLv~~~G~vvGI~s~~ 201 (237)
T 3k6y_A 186 PLIDLNGQVLGVVFGA 201 (237)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred HEECCCCEEEEEEEee
Confidence 4554 89999999875
No 155
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=33.16 E-value=18 Score=26.67 Aligned_cols=12 Identities=8% Similarity=0.052 Sum_probs=10.3
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
..|+||||+|+.
T Consensus 176 ~~g~lvGIvS~G 187 (274)
T 2o8l_A 176 EKNEVIGIHWGG 187 (274)
T ss_dssp TTSCEEEEEEEE
T ss_pred cCCeEEEEEeCc
Confidence 379999999985
No 156
>3hfn_A ASL2047 protein; HFQ, SM, RNA-binding protein, sRNA, translational regulation binding protein; 2.31A {Nostoc SP}
Probab=32.88 E-value=19 Score=22.87 Aligned_cols=32 Identities=6% Similarity=0.055 Sum_probs=23.1
Q ss_pred HHHHHHHHHhCCcEEEEeeCCeEEEEEehHHH
Q psy6637 39 LKVHSIFSLVGVNHAYVTAIGRLVGVVGLKEV 70 (105)
Q Consensus 39 ~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kDL 70 (105)
.++.++.+.-..=.+....+-+|+|.|.|.|-
T Consensus 14 R~lQ~~Ik~k~~V~I~L~tGd~l~G~i~WQD~ 45 (72)
T 3hfn_A 14 RQLQNLIKQAAPVEIKLVTGDAITGRVLWQDP 45 (72)
T ss_dssp HHHHHHHSSCCEEEEEETTSCEEEEEEEEECS
T ss_pred HHHHHHHhhCceEEEEecCCCEEEEEEEEECC
Confidence 34455555555556677788999999999984
No 157
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=31.86 E-value=34 Score=21.59 Aligned_cols=41 Identities=20% Similarity=0.354 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhCCcEEEEee-CCeEEEE----EehHHHHHhhccC
Q psy6637 37 SLLKVHSIFSLVGVNHAYVTA-IGRLVGV----VGLKEVRNDSHLS 77 (105)
Q Consensus 37 sL~kv~~LF~~Lglr~l~Vt~-~GrLVGv----VT~kDL~kaI~~~ 77 (105)
.-..+...|...++-..++.+ +|++++. .+..+|.+.|...
T Consensus 97 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 97 RPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLA 142 (154)
T ss_dssp CHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHT
T ss_pred chHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhc
Confidence 344444445555666777775 8887765 5778888888666
No 158
>3oov_A Methyl-accepting chemotaxis protein, putative; structural genomics, PSI-2, protein structure initiative; 2.20A {Geobacter sulfurreducens}
Probab=31.80 E-value=41 Score=20.89 Aligned_cols=22 Identities=14% Similarity=0.267 Sum_probs=15.7
Q ss_pred HhCCc---EEEEeeCCeEEEEEehH
Q psy6637 47 LVGVN---HAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 47 ~Lglr---~l~Vt~~GrLVGvVT~k 68 (105)
..+++ .+|+...|+++|++...
T Consensus 109 ~~~~~s~l~vPl~~~~~~iGvl~~~ 133 (169)
T 3oov_A 109 ALRSKSFVICPIVVKGEAIGVFAVD 133 (169)
T ss_dssp GGCCSSEEEEEEEETTEEEEEEEEE
T ss_pred hcCcCcEEEEEEEeCCcEEEEEEEE
Confidence 34554 45667799999999753
No 159
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=31.79 E-value=19 Score=22.30 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=25.6
Q ss_pred HHHHhCCcEEEEee--CCeEE-EEEehHHHHHhhccC
Q psy6637 44 IFSLVGVNHAYVTA--IGRLV-GVVGLKEVRNDSHLS 77 (105)
Q Consensus 44 LF~~Lglr~l~Vt~--~GrLV-GvVT~kDL~kaI~~~ 77 (105)
+....|++ +||+- +|+.+ |..+..+|.+++...
T Consensus 40 l~~~~g~~-vPtl~~~~G~~v~g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 40 LESAYGLR-VPVLRDPMGRELDWPFDAPRLRAWLDAA 75 (87)
T ss_dssp HHHHHTTT-CSEEECTTCCEEESCCCHHHHHHHHHTC
T ss_pred HHHHhCCC-cCeEEEECCEEEeCCCCHHHHHHHHHHH
Confidence 55566888 88875 68888 678889999988655
No 160
>2e4s_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; GAF domain, structural genomics, NPPSFA; HET: MSE CMP; 2.10A {Homo sapiens} PDB: 2zmf_A*
Probab=31.48 E-value=40 Score=21.49 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=13.6
Q ss_pred EEEEeeCCeEEEEEeh
Q psy6637 52 HAYVTAIGRLVGVVGL 67 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~ 67 (105)
.+|+..+|+++|++..
T Consensus 131 ~vPl~~~~~~iGvl~l 146 (189)
T 2e4s_A 131 CMPIVSRGSVIGVVQM 146 (189)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EEEeccCCeEEEEEEE
Confidence 4677789999999985
No 161
>3p01_A Two-component response regulator; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, signali protein; 2.65A {Nostoc SP}
Probab=31.44 E-value=68 Score=20.89 Aligned_cols=25 Identities=24% Similarity=0.379 Sum_probs=19.0
Q ss_pred HHHHHhCCcEE---EEeeCCeEEEEEeh
Q psy6637 43 SIFSLVGVNHA---YVTAIGRLVGVVGL 67 (105)
Q Consensus 43 ~LF~~Lglr~l---~Vt~~GrLVGvVT~ 67 (105)
..+...|++.. |+..+|+++|+++.
T Consensus 123 ~~~~~~~~~s~l~vPL~~~~~~~GvL~l 150 (184)
T 3p01_A 123 SQYQDNGIQSHVVIPITYRNEMLGVLSL 150 (184)
T ss_dssp HHHHHHTCCEEEEEEEEETTEEEEEEEE
T ss_pred hHHHHhCccEEEEEEEEECCEEEEEEEe
Confidence 45667788865 44569999999986
No 162
>2w3g_A DOSS, two component sensor histidine kinase DEVS (GAF family protein); redox sensor, heme, hypoxia, GAF domain, transferase; HET: HEM; 1.40A {Mycobacterium tuberculosis} PDB: 2w3d_A* 2w3f_A* 2w3e_A* 2w3h_A* 2y79_A* 2y8h_A* 2vzw_A*
Probab=30.92 E-value=44 Score=20.26 Aligned_cols=16 Identities=19% Similarity=0.073 Sum_probs=12.9
Q ss_pred EEEEeeCCeEEEEEeh
Q psy6637 52 HAYVTAIGRLVGVVGL 67 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~ 67 (105)
.+|+...|+++|++..
T Consensus 100 ~vPl~~~~~~~Gvl~l 115 (153)
T 2w3g_A 100 GVPVRVRDESFGTLYL 115 (153)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EeeEEECCEEEEEEEE
Confidence 3566789999999975
No 163
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=30.25 E-value=22 Score=26.14 Aligned_cols=11 Identities=9% Similarity=0.057 Sum_probs=9.9
Q ss_pred CCeEEEEEehH
Q psy6637 58 IGRLVGVVGLK 68 (105)
Q Consensus 58 ~GrLVGvVT~k 68 (105)
.|+||||+|+.
T Consensus 177 ~g~lvGIvS~G 187 (268)
T 1wcz_A 177 KNEVIGIHWGG 187 (268)
T ss_dssp TSCEEEEEEEE
T ss_pred CCEEEEEEeCC
Confidence 79999999985
No 164
>3e0y_A Conserved domain protein; APC87688.2, geobacter sulfurreducens PCA, structural genomics, PSI-2, midwest center for structural G MCSG; 3.10A {Geobacter sulfurreducens}
Probab=30.03 E-value=37 Score=21.29 Aligned_cols=20 Identities=20% Similarity=0.188 Sum_probs=14.2
Q ss_pred hCCcE---EEEeeCCeEEEEEeh
Q psy6637 48 VGVNH---AYVTAIGRLVGVVGL 67 (105)
Q Consensus 48 Lglr~---l~Vt~~GrLVGvVT~ 67 (105)
.|++. +|+...|+++|++..
T Consensus 115 ~~~~s~l~vPl~~~~~~iGvl~~ 137 (181)
T 3e0y_A 115 EKYNSMLSFPIGDKKEVYGVINL 137 (181)
T ss_dssp -CEEEEEEEEEECSSCEEEEEEE
T ss_pred cCcceEEEEEEEeCCeEEEEEEE
Confidence 44444 466679999999975
No 165
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=29.99 E-value=70 Score=21.49 Aligned_cols=38 Identities=8% Similarity=0.043 Sum_probs=25.8
Q ss_pred HHHHHHHHHh-----CCcEEEEee-CCeEEEEE--------ehHHHHHhhcc
Q psy6637 39 LKVHSIFSLV-----GVNHAYVTA-IGRLVGVV--------GLKEVRNDSHL 76 (105)
Q Consensus 39 ~kv~~LF~~L-----glr~l~Vt~-~GrLVGvV--------T~kDL~kaI~~ 76 (105)
..+...|... ++...+|.+ +|++++.. +..+|.++|..
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 167 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDA 167 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 3444555555 667888886 89999987 35677776643
No 166
>3r8s_H 50S ribosomal protein L9; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_F 1p86_F 1vs8_H 1vs6_H 2aw4_H 2awb_H 2gya_F 2gyc_F 1vt2_H 2i2v_H 2j28_H 2i2t_H* 2qao_H* 2qba_H* 2qbc_H* 2qbe_H 2qbg_H 2qbi_H* 2qbk_H* 2qov_H ...
Probab=29.78 E-value=31 Score=24.23 Aligned_cols=21 Identities=19% Similarity=0.521 Sum_probs=18.4
Q ss_pred eCCeEEEEEehHHHHHhhccC
Q psy6637 57 AIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 57 ~~GrLVGvVT~kDL~kaI~~~ 77 (105)
++|+|-|-||.+|+.+++...
T Consensus 86 ~~gklfGSVt~~dIa~al~~~ 106 (149)
T 3r8s_H 86 DEGKLFGSIGTRDIADAVTAA 106 (149)
T ss_dssp TTSEEEEEECHHHHHHHHHTT
T ss_pred CCCceEcccCHHHHHHHHHHc
Confidence 479999999999999998654
No 167
>1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B*
Probab=28.47 E-value=97 Score=19.36 Aligned_cols=30 Identities=10% Similarity=0.089 Sum_probs=17.1
Q ss_pred HHHHHHHHHhCCcEEEEeeCCeEEEEEehH
Q psy6637 39 LKVHSIFSLVGVNHAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 39 ~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~k 68 (105)
.....++..-+.....+..+|++||.++..
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 72 (168)
T 1z4r_A 43 EYIARLVFDPKHKTLALIKDGRVIGGICFR 72 (168)
T ss_dssp HHHHHHHTCTTCEEEEEEETTEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEEECCEEEEEEEEE
Confidence 333444333333344444689999998764
No 168
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=28.43 E-value=34 Score=23.22 Aligned_cols=16 Identities=13% Similarity=0.007 Sum_probs=12.1
Q ss_pred EEEeeCCeEEEEEehH
Q psy6637 53 AYVTAIGRLVGVVGLK 68 (105)
Q Consensus 53 l~Vt~~GrLVGvVT~k 68 (105)
-++...+++|||+|+.
T Consensus 139 GPlv~~~~~vGI~s~g 154 (181)
T 2sga_A 139 GSLFAGSTALGLTSGG 154 (181)
T ss_dssp CEEEETTEEEEEEEEE
T ss_pred CEEEECCEEEEEEEee
Confidence 3555667999999985
No 169
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=28.39 E-value=87 Score=20.87 Aligned_cols=47 Identities=9% Similarity=0.123 Sum_probs=28.9
Q ss_pred ceEEeccCCHHHHHHHHHHh-----CCcEEEEee-CCeEEEEEe--------hHHHHHhhcc
Q psy6637 29 PFQLVERTSLLKVHSIFSLV-----GVNHAYVTA-IGRLVGVVG--------LKEVRNDSHL 76 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~L-----glr~l~Vt~-~GrLVGvVT--------~kDL~kaI~~ 76 (105)
+|.+..+.. .++...|... +++..+|.+ +|++++... .++++++|..
T Consensus 96 ~~~~l~D~~-~~~~~~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 96 KHTLISDIS-KSIARSYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp SSEEEECTT-SHHHHHTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred CcCeEECCc-HHHHHHhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 444443322 3444555555 567888886 999999874 3566666643
No 170
>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*
Probab=28.06 E-value=94 Score=20.14 Aligned_cols=31 Identities=23% Similarity=0.101 Sum_probs=19.0
Q ss_pred CHHHHHHHHHHhCCcEEEEeeCCeEEEEEeh
Q psy6637 37 SLLKVHSIFSLVGVNHAYVTAIGRLVGVVGL 67 (105)
Q Consensus 37 sL~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~ 67 (105)
+.......+..-+-....+.++|++||.+..
T Consensus 66 ~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~ 96 (207)
T 1kux_A 66 NLDEVQHFLTLCPELSLGWFVEGRLVAFIIG 96 (207)
T ss_dssp CHHHHHHHHHHCGGGEEEEEETTEEEEEEEE
T ss_pred CHHHHHHHHhhCCCeEEEEEECCEEEEEEEE
Confidence 3445555555434334444568999999875
No 171
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=28.03 E-value=35 Score=23.19 Aligned_cols=15 Identities=13% Similarity=0.051 Sum_probs=11.2
Q ss_pred EEeeCCeEEEEEehH
Q psy6637 54 YVTAIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~~GrLVGvVT~k 68 (105)
++...++||||+|+.
T Consensus 144 Plv~~~~~vGI~s~g 158 (185)
T 2qa9_E 144 PLYSGTRAIGLTSGG 158 (185)
T ss_dssp EEEETTEEEEEEEEE
T ss_pred eEEECCEEEEEEEec
Confidence 444556999999985
No 172
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=27.74 E-value=33 Score=23.53 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=11.5
Q ss_pred EEeeCCeEEEEEehH
Q psy6637 54 YVTAIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~~GrLVGvVT~k 68 (105)
++..+|+|+||+|+.
T Consensus 189 Pl~~~~~l~Gi~S~g 203 (235)
T 3h7t_A 189 PAVQNGTLVGVASYI 203 (235)
T ss_dssp EEEETTEEEEEECCC
T ss_pred ceeeCCeEEEEEEec
Confidence 344478999999985
No 173
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=27.64 E-value=84 Score=18.92 Aligned_cols=20 Identities=0% Similarity=-0.001 Sum_probs=13.4
Q ss_pred CCcEEEEeeCCeEEEEEehH
Q psy6637 49 GVNHAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 49 glr~l~Vt~~GrLVGvVT~k 68 (105)
+.....+.++|++||.+...
T Consensus 50 ~~~~~v~~~~~~ivG~~~~~ 69 (157)
T 3mgd_A 50 LLVEWIAEENNQIIATAAIA 69 (157)
T ss_dssp SEEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEEECCEEEEEEEEE
Confidence 33334445699999998653
No 174
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=27.14 E-value=27 Score=25.70 Aligned_cols=15 Identities=20% Similarity=0.257 Sum_probs=11.6
Q ss_pred EEe-eCCeEEEEEehH
Q psy6637 54 YVT-AIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt-~~GrLVGvVT~k 68 (105)
++. .+|+||||+|+.
T Consensus 190 PLvn~~G~vVGI~s~~ 205 (245)
T 3sti_A 190 ALLNLNGELIGINTAI 205 (245)
T ss_dssp EEECTTSCEEEEEECC
T ss_pred HeecCCCeEEEEEEeE
Confidence 444 489999999974
No 175
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=26.37 E-value=1.3e+02 Score=19.26 Aligned_cols=29 Identities=14% Similarity=0.291 Sum_probs=20.6
Q ss_pred HHHHHHHHHhC----CcEEEEee-CCeEEEEEeh
Q psy6637 39 LKVHSIFSLVG----VNHAYVTA-IGRLVGVVGL 67 (105)
Q Consensus 39 ~kv~~LF~~Lg----lr~l~Vt~-~GrLVGvVT~ 67 (105)
.++...|...| +...|+.+ +|+++....-
T Consensus 96 ~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g 129 (161)
T 3drn_A 96 KKIRELYGAKGFILPARITFVIDKKGIIRHIYNS 129 (161)
T ss_dssp SHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHHcCCCCcCcccceEEEECCCCEEEEEEec
Confidence 34555566667 78888886 9999887654
No 176
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=26.26 E-value=59 Score=21.58 Aligned_cols=48 Identities=8% Similarity=0.214 Sum_probs=29.1
Q ss_pred ceEEeccCCHHHHHHHHHHh------CCcEEEEee-CCeEEEEE--------ehHHHHHhhccC
Q psy6637 29 PFQLVERTSLLKVHSIFSLV------GVNHAYVTA-IGRLVGVV--------GLKEVRNDSHLS 77 (105)
Q Consensus 29 P~qv~~~tsL~kv~~LF~~L------glr~l~Vt~-~GrLVGvV--------T~kDL~kaI~~~ 77 (105)
+|.+..+.. .++...|... ++...++.+ +|++++.. +..+|.++|...
T Consensus 93 ~~~~~~d~~-~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 93 EYIMIGDPS-QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp CSEEEECTT-CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred CceEEECCc-hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 444443322 3444444444 566788885 89999986 356777777543
No 177
>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Probab=25.60 E-value=80 Score=19.70 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=19.2
Q ss_pred CHHHHHHHHHHh----CCcEEEE-eeCCeEEEEEehH
Q psy6637 37 SLLKVHSIFSLV----GVNHAYV-TAIGRLVGVVGLK 68 (105)
Q Consensus 37 sL~kv~~LF~~L----glr~l~V-t~~GrLVGvVT~k 68 (105)
+.......+... +-...+| ..+|++||.+...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~vG~~~~~ 86 (188)
T 3owc_A 50 SLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLL 86 (188)
T ss_dssp CGGGGHHHHHHHHSSSCSEEEEEEEETTEEEEEEEEE
T ss_pred cHHHHHHHHHHhccCCCCcEEEEEEECCcEEEEEEEE
Confidence 344444555441 3344444 4599999999875
No 178
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=25.36 E-value=1.1e+02 Score=18.59 Aligned_cols=18 Identities=17% Similarity=0.045 Sum_probs=12.8
Q ss_pred cEEEE-eeCCeEEEEEehH
Q psy6637 51 NHAYV-TAIGRLVGVVGLK 68 (105)
Q Consensus 51 r~l~V-t~~GrLVGvVT~k 68 (105)
...+| ..+|++||.+...
T Consensus 76 ~~~~v~~~~~~~vG~~~~~ 94 (168)
T 1bo4_A 76 FIALAAFDQEAVVGALAAY 94 (168)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred eEEEEEEECCeEEEEEEEE
Confidence 34444 4699999998864
No 179
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=24.81 E-value=1.3e+02 Score=18.74 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=24.8
Q ss_pred HHHHHHHHhCCcEEEEee-CCeEEEE----EehHHHHHhhc
Q psy6637 40 KVHSIFSLVGVNHAYVTA-IGRLVGV----VGLKEVRNDSH 75 (105)
Q Consensus 40 kv~~LF~~Lglr~l~Vt~-~GrLVGv----VT~kDL~kaI~ 75 (105)
++...|...++-..++.+ +|+++.. ++..+|.++|.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 148 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIA 148 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHH
Confidence 455556666777777875 8988765 56777777664
No 180
>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A
Probab=24.55 E-value=1.3e+02 Score=18.50 Aligned_cols=18 Identities=17% Similarity=0.451 Sum_probs=13.0
Q ss_pred cEEEE-eeCCeEEEEEehH
Q psy6637 51 NHAYV-TAIGRLVGVVGLK 68 (105)
Q Consensus 51 r~l~V-t~~GrLVGvVT~k 68 (105)
...+| ..+|++||.++..
T Consensus 70 ~~~~~~~~~~~~vG~~~~~ 88 (182)
T 1s7k_A 70 AKMYLIFCQNEMAGVLSFN 88 (182)
T ss_dssp CEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEECCEEEEEEEEE
Confidence 34444 4689999999865
No 181
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=24.53 E-value=1.2e+02 Score=19.14 Aligned_cols=18 Identities=28% Similarity=0.224 Sum_probs=13.9
Q ss_pred EEEEeeCCeEEEEEehHH
Q psy6637 52 HAYVTAIGRLVGVVGLKE 69 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~kD 69 (105)
.+.+.++|++||.+....
T Consensus 89 ~~v~~~~~~ivG~~~~~~ 106 (183)
T 3fix_A 89 FLGAFADSTLIGFIELKI 106 (183)
T ss_dssp EEEEEETTEEEEEEEEEE
T ss_pred EEEEEeCCEEEEEEEEEe
Confidence 555567999999998753
No 182
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=24.44 E-value=53 Score=21.18 Aligned_cols=31 Identities=10% Similarity=0.152 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCcEEEEeeCCeEEEEEehHH
Q psy6637 39 LKVHSIFSLVGVNHAYVTAIGRLVGVVGLKE 69 (105)
Q Consensus 39 ~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~kD 69 (105)
......+..-+.....+..+|++||.+....
T Consensus 60 ~~~~~~~~~~~~~~~v~~~~g~ivG~~~~~~ 90 (181)
T 2q7b_A 60 FQIENYYQNRKGQFWIALENEKVVGSIALLR 90 (181)
T ss_dssp GCHHHHTGGGTCEEEEEEETTEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEEECCEEEEEEEEEE
Confidence 3344444443433344456999999998654
No 183
>3hcy_A Putative two-component sensor histidine kinase PR; two-component sensor histidine kinase protein, structural GE PSI, MCSG; 2.80A {Sinorhizobium meliloti}
Probab=23.83 E-value=53 Score=20.34 Aligned_cols=28 Identities=18% Similarity=0.220 Sum_probs=20.0
Q ss_pred HHHHHHHHhCCcEE---EEeeCCeEEEEEeh
Q psy6637 40 KVHSIFSLVGVNHA---YVTAIGRLVGVVGL 67 (105)
Q Consensus 40 kv~~LF~~Lglr~l---~Vt~~GrLVGvVT~ 67 (105)
.........|++.+ |+...|+++|+++.
T Consensus 80 ~~~~~~~~~g~~s~~~vPl~~~~~~iGvl~~ 110 (151)
T 3hcy_A 80 ELKESIVGEGIAALGFFPLVTEGRLIGKFMT 110 (151)
T ss_dssp HHHHHHHHHTCCEEEEEEEESSSSEEEEEEE
T ss_pred hhHHHHHhcCchheEEeceEECCEEEEEEEE
Confidence 34456677788765 44569999999864
No 184
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=23.60 E-value=47 Score=22.85 Aligned_cols=14 Identities=21% Similarity=0.522 Sum_probs=10.9
Q ss_pred EeeCCeEEEEEehH
Q psy6637 55 VTAIGRLVGVVGLK 68 (105)
Q Consensus 55 Vt~~GrLVGvVT~k 68 (105)
+..+++|+||+|+.
T Consensus 184 L~~~~~l~Gi~S~g 197 (234)
T 3s69_A 184 LICNGQFQGIVSFG 197 (234)
T ss_dssp EEETTEEEEEEEEC
T ss_pred eEEcCEEEEEEEEc
Confidence 34468899999985
No 185
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=23.59 E-value=35 Score=23.65 Aligned_cols=11 Identities=27% Similarity=0.432 Sum_probs=9.8
Q ss_pred CCeEEEEEehH
Q psy6637 58 IGRLVGVVGLK 68 (105)
Q Consensus 58 ~GrLVGvVT~k 68 (105)
+|+|+||+|+.
T Consensus 188 ~g~l~Gi~S~g 198 (224)
T 1pq7_A 188 SNTLIGAVSWG 198 (224)
T ss_dssp TCCEEEEEEEC
T ss_pred CCeEEEEEEeC
Confidence 78999999986
No 186
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=23.54 E-value=1.3e+02 Score=18.25 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=14.7
Q ss_pred CCcEEEEee---CCeEEEEEehH
Q psy6637 49 GVNHAYVTA---IGRLVGVVGLK 68 (105)
Q Consensus 49 glr~l~Vt~---~GrLVGvVT~k 68 (105)
+-.+++|.. +|++||.++..
T Consensus 66 ~~~~~~v~~~~~~~~ivG~~~~~ 88 (165)
T 4ag7_A 66 PNYHIVVIEDSNSQKVVASASLV 88 (165)
T ss_dssp SCCEEEEEEETTTTEEEEEEEEE
T ss_pred CceEEEEEEeCCCCeEEEEEEEE
Confidence 445566665 89999999864
No 187
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=23.47 E-value=47 Score=23.10 Aligned_cols=12 Identities=42% Similarity=0.534 Sum_probs=10.0
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+|+||+|+.
T Consensus 182 ~~~~l~Gi~S~g 193 (222)
T 1hj8_A 182 CNGELQGVVSWG 193 (222)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEeec
Confidence 467999999985
No 188
>1div_A Ribosomal protein L9; rRNA-binding; 2.60A {Geobacillus stearothermophilus} SCOP: d.99.1.1 d.100.1.1 PDB: 1giy_K 1yl3_K 2b66_I 2b9n_I 2b9p_I 487d_K
Probab=23.46 E-value=1.6e+02 Score=20.53 Aligned_cols=40 Identities=15% Similarity=0.195 Sum_probs=26.3
Q ss_pred HHHHHHHHHHhCCcEEEEe----eCCeEEEEEehHHHHHhhccC
Q psy6637 38 LLKVHSIFSLVGVNHAYVT----AIGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 38 L~kv~~LF~~Lglr~l~Vt----~~GrLVGvVT~kDL~kaI~~~ 77 (105)
+..|..+-..|.--.+-+. ++|+|-|-||.+|+.+++...
T Consensus 62 ~~~A~~~a~~L~~~~v~i~~k~g~~gklfGSVt~~dIa~al~~~ 105 (149)
T 1div_A 62 LANAKKLKEQLEKLTVTIPAKAGEGGRLFGSITSKQIAESLQAQ 105 (149)
T ss_dssp HHHHHHHHHHHTTCCEEEEECBCGGGEEEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEEEeCCCCcEEeecCHHHHHHHHHHh
Confidence 3445555555543333333 369999999999999988643
No 189
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=23.39 E-value=47 Score=23.10 Aligned_cols=12 Identities=33% Similarity=0.617 Sum_probs=9.9
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+|+||+|+.
T Consensus 183 ~~~~l~GI~S~g 194 (223)
T 3mfj_A 183 CSGKLQGIVSWG 194 (223)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEEEC
Confidence 367899999985
No 190
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=23.33 E-value=37 Score=24.70 Aligned_cols=12 Identities=17% Similarity=0.335 Sum_probs=10.4
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+||||+|+.
T Consensus 190 ~~G~vvGI~s~~ 201 (239)
T 1l1j_A 190 IHGEVIGINTAI 201 (239)
T ss_dssp SSSEEEEEECCC
T ss_pred CCCeEEEEEeee
Confidence 489999999975
No 191
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=23.29 E-value=58 Score=19.04 Aligned_cols=34 Identities=12% Similarity=0.034 Sum_probs=24.0
Q ss_pred HHHHHHhCCcEEEEee-CCeEEEEEehHHHHHhhc
Q psy6637 42 HSIFSLVGVNHAYVTA-IGRLVGVVGLKEVRNDSH 75 (105)
Q Consensus 42 ~~LF~~Lglr~l~Vt~-~GrLVGvVT~kDL~kaI~ 75 (105)
..+....|.+.+|++- +|+.+|=.+..+|.+++.
T Consensus 57 ~~l~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVKGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHHSSSCSCEEEETTEEEESCCHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEECCEEEeCCCHHHHHHHhc
Confidence 4555677777777764 777777678888877763
No 192
>3k2n_A Sigma-54-dependent transcriptional regulator; PSI-2, protein structure initiative, structural genomics; 2.50A {Chlorobium tepidum tls}
Probab=23.22 E-value=70 Score=20.11 Aligned_cols=25 Identities=16% Similarity=0.400 Sum_probs=18.9
Q ss_pred HHHHHhCCcE---EEEeeCCeEEEEEeh
Q psy6637 43 SIFSLVGVNH---AYVTAIGRLVGVVGL 67 (105)
Q Consensus 43 ~LF~~Lglr~---l~Vt~~GrLVGvVT~ 67 (105)
..+...|++. +|+...|+++|+++.
T Consensus 110 ~~~~~~~~~s~l~vPL~~~~~~iGvL~l 137 (177)
T 3k2n_A 110 WTLHELGMRQIVLSPLRSGGRVIGFLSF 137 (177)
T ss_dssp HHHHHHTCCEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHcCceEEEEEEEEECCEEEEEEEE
Confidence 4567778887 455579999999975
No 193
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=23.22 E-value=35 Score=25.72 Aligned_cols=15 Identities=27% Similarity=0.428 Sum_probs=11.9
Q ss_pred EEe-eCCeEEEEEehH
Q psy6637 54 YVT-AIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt-~~GrLVGvVT~k 68 (105)
++. .+|+||||+|+.
T Consensus 175 Plv~~~G~vvGI~s~~ 190 (332)
T 3num_A 175 PLVNLDGEVIGINTLK 190 (332)
T ss_dssp EEEETTSCEEEEEEEE
T ss_pred HhhCCCCcEEEEEeeE
Confidence 455 489999999975
No 194
>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=23.20 E-value=1.4e+02 Score=18.44 Aligned_cols=17 Identities=29% Similarity=0.393 Sum_probs=12.4
Q ss_pred EEEEeeCCeEEEEEehH
Q psy6637 52 HAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~k 68 (105)
...+..+|++||.+...
T Consensus 70 ~~~~~~~~~~vG~~~~~ 86 (184)
T 1nsl_A 70 EAGLLYDGSLCGMISLH 86 (184)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCEEEEEEEEE
Confidence 34444689999999865
No 195
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=23.05 E-value=48 Score=22.83 Aligned_cols=15 Identities=13% Similarity=0.286 Sum_probs=11.4
Q ss_pred EEeeCCeEEEEEehH
Q psy6637 54 YVTAIGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~~GrLVGvVT~k 68 (105)
++..+++|+||+|+.
T Consensus 187 PL~~~~~l~Gi~S~g 201 (238)
T 4e7n_A 187 PLICNGQFQGIASWG 201 (238)
T ss_dssp EEEETTEEEEEEEEC
T ss_pred ceEECCEEEEEEEEe
Confidence 334468899999986
No 196
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=23.01 E-value=94 Score=19.40 Aligned_cols=29 Identities=3% Similarity=0.017 Sum_probs=16.7
Q ss_pred HHHHHHHHHhCCcEEEEeeCCeEEEEEeh
Q psy6637 39 LKVHSIFSLVGVNHAYVTAIGRLVGVVGL 67 (105)
Q Consensus 39 ~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~ 67 (105)
......+..-+.....+..+|++||.+..
T Consensus 52 ~~~~~~~~~~~~~~~v~~~~~~~vG~~~~ 80 (166)
T 4evy_A 52 QEMHQLLAEKYALQLLAYSDHQAIAMLEA 80 (166)
T ss_dssp HHHHHHHTCTTEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHhcCCCceEEEEEECCeEEEEEEE
Confidence 33444444333333334458999999975
No 197
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=22.73 E-value=1.1e+02 Score=18.87 Aligned_cols=19 Identities=16% Similarity=0.232 Sum_probs=13.3
Q ss_pred cEEEE-eeCCeEEEEEehHH
Q psy6637 51 NHAYV-TAIGRLVGVVGLKE 69 (105)
Q Consensus 51 r~l~V-t~~GrLVGvVT~kD 69 (105)
...+| ..+|++||.+....
T Consensus 63 ~~~~v~~~~~~ivG~~~~~~ 82 (165)
T 1s3z_A 63 LASFIAMADGVAIGFADASI 82 (165)
T ss_dssp EEEEEEEETTEEEEEEEEEE
T ss_pred ceEEEEEECCEEEEEEEEEe
Confidence 34444 46899999988653
No 198
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=22.72 E-value=1.3e+02 Score=18.86 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=26.4
Q ss_pred CCHHHHHHHHH--HhCCcEEEEee-CCeEEE----EEehHHHHHhhccC
Q psy6637 36 TSLLKVHSIFS--LVGVNHAYVTA-IGRLVG----VVGLKEVRNDSHLS 77 (105)
Q Consensus 36 tsL~kv~~LF~--~Lglr~l~Vt~-~GrLVG----vVT~kDL~kaI~~~ 77 (105)
.....+...|. ..++-..++.+ +|++++ .++..+|.++|...
T Consensus 90 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 90 ANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 33444444444 45566777775 787765 56888888777654
No 199
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=22.69 E-value=43 Score=20.24 Aligned_cols=34 Identities=12% Similarity=0.152 Sum_probs=22.7
Q ss_pred HHhCCcEEEEeeCCeEE----EEEehHHHHHhhccCch
Q psy6637 46 SLVGVNHAYVTAIGRLV----GVVGLKEVRNDSHLSSV 79 (105)
Q Consensus 46 ~~Lglr~l~Vt~~GrLV----GvVT~kDL~kaI~~~~~ 79 (105)
...++-.+++..+|+++ |..+..+|.+.+.....
T Consensus 68 ~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 68 GVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp TCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSC
T ss_pred CCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 33444556666888865 66778899888866533
No 200
>3dba_A CONE CGMP-specific 3',5'-cyclic phosphodiesterase alpha'; 3', GAF domain, cyclic nucleotide phosphodiesterase hydrolase, lipoprotein, membrane; HET: 35G; 2.57A {Gallus gallus}
Probab=22.65 E-value=70 Score=21.20 Aligned_cols=20 Identities=15% Similarity=-0.007 Sum_probs=15.5
Q ss_pred CCcEEEEeeCCeEEEEEehH
Q psy6637 49 GVNHAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 49 glr~l~Vt~~GrLVGvVT~k 68 (105)
.+=.+|+...|+++||+..-
T Consensus 125 S~L~vPl~~~~~viGVL~l~ 144 (180)
T 3dba_A 125 NMMAIPITQGKEVLAVVMAL 144 (180)
T ss_dssp CEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEeccCCEEEEEEEEE
Confidence 44467778899999999863
No 201
>3ey5_A Acetyltransferase-like, GNAT family; structural genomics, APC60148, GNAT famil protein structure initiative; 2.15A {Bacteroides thetaiotaomicron}
Probab=22.65 E-value=90 Score=20.00 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=22.0
Q ss_pred cCCHHHHHHHHHHhCCcEEEEe-eCCeEEEEEehH
Q psy6637 35 RTSLLKVHSIFSLVGVNHAYVT-AIGRLVGVVGLK 68 (105)
Q Consensus 35 ~tsL~kv~~LF~~Lglr~l~Vt-~~GrLVGvVT~k 68 (105)
..+.......+...+-.+.+|. .+|++||.+...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~v~~~~~~ivG~~~~~ 68 (181)
T 3ey5_A 34 YRELEHLREYTDRIGNFHNNIIFDDDLPIGFITYW 68 (181)
T ss_dssp SCCHHHHHHHHHHCTTEEEEEEEETTEEEEEEEEE
T ss_pred cchHHHHHHHhccCCCeEEEEEEECCEEEEEEEEE
Confidence 3455566666653444555554 599999999864
No 202
>3exn_A Probable acetyltransferase; GCN5-related N-acetyltransferase, MCSG, P structural genomics, protein structure initiative; HET: ACO; 1.80A {Thermus thermophilus}
Probab=22.53 E-value=1.3e+02 Score=17.91 Aligned_cols=17 Identities=18% Similarity=0.016 Sum_probs=12.5
Q ss_pred EEEEeeCCeEEEEEehH
Q psy6637 52 HAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~k 68 (105)
...+..+|++||.+...
T Consensus 64 ~~~~~~~~~~vG~~~~~ 80 (160)
T 3exn_A 64 AFLLFLGQEPVGYLDAK 80 (160)
T ss_dssp EEEEEETTEEEEEEEEE
T ss_pred EEEEEECCeEEEEEEee
Confidence 34444699999999865
No 203
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=22.47 E-value=50 Score=23.03 Aligned_cols=12 Identities=17% Similarity=0.526 Sum_probs=10.0
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+|+||+|+.
T Consensus 183 ~~~~l~Gi~S~g 194 (231)
T 2aiq_A 183 CNGQFQGILSVG 194 (231)
T ss_dssp ETTEEEEEEEEE
T ss_pred ECCEEEEEEEEe
Confidence 357999999985
No 204
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=22.19 E-value=1.2e+02 Score=20.98 Aligned_cols=40 Identities=15% Similarity=0.123 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCcEEEEee---CCeEEEEEehHHHHHhhccC
Q psy6637 38 LLKVHSIFSLVGVNHAYVTA---IGRLVGVVGLKEVRNDSHLS 77 (105)
Q Consensus 38 L~kv~~LF~~Lglr~l~Vt~---~GrLVGvVT~kDL~kaI~~~ 77 (105)
+..+..+-..|.--.+-+.. +|+|-|-||-+|+.+++...
T Consensus 61 ~~~A~~~a~~L~~~~v~i~~k~g~gklfGSVt~~dIa~al~~~ 103 (146)
T 1nkw_F 61 KAVAEDLASRLNGVAVELSVRAGEGKIYGAVTHQDVANSLDQL 103 (146)
T ss_pred HHHHHHHHHHhcCCEEEEEEEcCCCceeeccCHHHHHHHHHHc
Confidence 44555555555433333332 59999999999999998754
No 205
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=22.18 E-value=1.3e+02 Score=17.71 Aligned_cols=20 Identities=25% Similarity=0.140 Sum_probs=13.2
Q ss_pred CCcEEEEee--CCeEEEEEehH
Q psy6637 49 GVNHAYVTA--IGRLVGVVGLK 68 (105)
Q Consensus 49 glr~l~Vt~--~GrLVGvVT~k 68 (105)
+.....+.+ +|++||.+...
T Consensus 46 ~~~~~v~~~~~~~~~vG~~~~~ 67 (153)
T 2eui_A 46 ESVIYLALADEEDRLLGFCQLY 67 (153)
T ss_dssp CSEEEEEECSSSCCEEEEEEEE
T ss_pred CCeEEEEEecCCCcEEEEEEEE
Confidence 333444445 79999999863
No 206
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=21.99 E-value=48 Score=23.07 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=10.0
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+|+||+|+.
T Consensus 195 ~~~~l~GI~S~g 206 (237)
T 1gvz_A 195 CDGVFQGITSWG 206 (237)
T ss_dssp ETTEEEEEECCC
T ss_pred eCCEEEEEEEeC
Confidence 368999999985
No 207
>2zmf_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phospho 10A; GAF domain, phosphodiesterase, CGMP-binding, HYD nucleotide-binding, structural genomics; HET: MSE CMP; 2.10A {Homo sapiens}
Probab=21.92 E-value=77 Score=19.94 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=12.5
Q ss_pred EEEEeeCCeEEEEEeh
Q psy6637 52 HAYVTAIGRLVGVVGL 67 (105)
Q Consensus 52 ~l~Vt~~GrLVGvVT~ 67 (105)
.+|+...|+++|++..
T Consensus 131 ~vPl~~~~~~~Gvl~l 146 (189)
T 2zmf_A 131 CMPIVSRGSVIGVVQM 146 (189)
T ss_dssp EEEEEETTEEEEEEEE
T ss_pred EeeecccCceeeEEEE
Confidence 4566789999999853
No 208
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=21.91 E-value=52 Score=22.82 Aligned_cols=12 Identities=25% Similarity=0.346 Sum_probs=9.8
Q ss_pred eCCeEEEEEehH
Q psy6637 57 AIGRLVGVVGLK 68 (105)
Q Consensus 57 ~~GrLVGvVT~k 68 (105)
.+|+|+||+|+.
T Consensus 186 ~~~~l~GI~S~g 197 (225)
T 1npm_A 186 CDGMLQGITSWG 197 (225)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEEeC
Confidence 357899999985
No 209
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=21.88 E-value=1e+02 Score=20.82 Aligned_cols=39 Identities=5% Similarity=0.023 Sum_probs=26.5
Q ss_pred HHHHHHHHHh------CCcEEEEee-CCeEEEEEe--------hHHHHHhhccC
Q psy6637 39 LKVHSIFSLV------GVNHAYVTA-IGRLVGVVG--------LKEVRNDSHLS 77 (105)
Q Consensus 39 ~kv~~LF~~L------glr~l~Vt~-~GrLVGvVT--------~kDL~kaI~~~ 77 (105)
.++...|... ++...||.+ +|++++... ..+++++|...
T Consensus 110 ~~~~~~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 110 KCIMKSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp CHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 3455556655 677888886 899999852 26777777543
No 210
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=21.68 E-value=1.2e+02 Score=17.92 Aligned_cols=28 Identities=11% Similarity=0.049 Sum_probs=18.0
Q ss_pred HHHHHHHHhCCcEEEEe-eCCeEEEEEeh
Q psy6637 40 KVHSIFSLVGVNHAYVT-AIGRLVGVVGL 67 (105)
Q Consensus 40 kv~~LF~~Lglr~l~Vt-~~GrLVGvVT~ 67 (105)
....++........+|. .+|++||.+..
T Consensus 44 ~~~~~~~~~~~~~~~v~~~~~~~vG~~~~ 72 (157)
T 3dsb_A 44 GVKALLLDERKGKYHVYTVFDKVVAQIMY 72 (157)
T ss_dssp HHHHHHHCGGGCEEEEEEETTEEEEEEEE
T ss_pred HHHHHHhCcCcceEEEEEeCCcEEEEEEE
Confidence 34455544444455554 59999999987
No 211
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=21.62 E-value=56 Score=19.38 Aligned_cols=34 Identities=9% Similarity=0.192 Sum_probs=21.7
Q ss_pred HHHHHhCCcEEEEeeCCeEE----EEEehHHHHHhhcc
Q psy6637 43 SIFSLVGVNHAYVTAIGRLV----GVVGLKEVRNDSHL 76 (105)
Q Consensus 43 ~LF~~Lglr~l~Vt~~GrLV----GvVT~kDL~kaI~~ 76 (105)
.-|...++=.+++..+|+.+ |..+..+|.+.+..
T Consensus 65 ~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~ 102 (105)
T 4euy_A 65 GRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQL 102 (105)
T ss_dssp -----CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHT
T ss_pred HhcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHH
Confidence 33455566667777888886 77788888887753
No 212
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=21.62 E-value=53 Score=22.82 Aligned_cols=13 Identities=38% Similarity=0.521 Sum_probs=10.3
Q ss_pred eeCCeEEEEEehH
Q psy6637 56 TAIGRLVGVVGLK 68 (105)
Q Consensus 56 t~~GrLVGvVT~k 68 (105)
..+|+|+||+|+.
T Consensus 186 ~~~~~l~Gi~S~g 198 (228)
T 1fxy_A 186 VCNGQLQGVVSWG 198 (228)
T ss_dssp EETTEEEEEEEEC
T ss_pred EECCEEEEEEEEC
Confidence 3457999999985
No 213
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=21.45 E-value=50 Score=23.09 Aligned_cols=11 Identities=27% Similarity=0.341 Sum_probs=9.4
Q ss_pred CCeEEEEEehH
Q psy6637 58 IGRLVGVVGLK 68 (105)
Q Consensus 58 ~GrLVGvVT~k 68 (105)
+|.|+||+|+.
T Consensus 199 ~~~l~GI~S~g 209 (240)
T 1sgf_A 199 DGILQGITSWG 209 (240)
T ss_dssp TTEEEEEECCC
T ss_pred ccEEEEEEEEC
Confidence 57899999985
No 214
>2atr_A Acetyltransferase, GNAT family; MCSG, structural genomics, PSI, protein structure INIT midwest center for structural genomics; 2.01A {Streptococcus pneumoniae} SCOP: d.108.1.1
Probab=21.04 E-value=97 Score=18.22 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=16.2
Q ss_pred HHHHHHHHHhCCcEEEEeeCCeEEEEEeh
Q psy6637 39 LKVHSIFSLVGVNHAYVTAIGRLVGVVGL 67 (105)
Q Consensus 39 ~kv~~LF~~Lglr~l~Vt~~GrLVGvVT~ 67 (105)
......+. -+.....+..+|++||.+..
T Consensus 32 ~~~~~~~~-~~~~~~~~~~~~~~vG~~~~ 59 (138)
T 2atr_A 32 EMLEQALS-HSLVIYLALDGDAVVGLIRL 59 (138)
T ss_dssp CHHHHHHT-SCSEEEEEEETTEEEEEEEE
T ss_pred HHHHHhcC-CCeEEEEEEECCeeEEEEEE
Confidence 33444443 23223444569999999975
No 215
>2k2n_A Sensor protein, SYB-CPH1(GAF); phytochrome, GAF domain, phycocyanobilin, PCB, bacteriophytochrome, cyanobacterial phytochrome, kinase; HET: CYC; NMR {Synechococcus SP} SCOP: d.110.2.1 PDB: 2kli_A* 2koi_A*
Probab=21.03 E-value=71 Score=20.68 Aligned_cols=26 Identities=19% Similarity=0.198 Sum_probs=20.9
Q ss_pred HHHHHHhCCcEEEEe---eCCeEEEEEeh
Q psy6637 42 HSIFSLVGVNHAYVT---AIGRLVGVVGL 67 (105)
Q Consensus 42 ~~LF~~Lglr~l~Vt---~~GrLVGvVT~ 67 (105)
...+...|++..+++ .+|+++|++..
T Consensus 110 ~~~~~~~~~~s~l~vPi~~~~~l~G~l~~ 138 (172)
T 2k2n_A 110 VHYLKSMGVASSLVVPLMHHQELWGLLVS 138 (172)
T ss_dssp HHHHHTTTCSEEEECCCSCSSCCCEEEEE
T ss_pred HHHHHhcCCeEEEEEEEEECCEEEEEEEE
Confidence 456778899988776 48999999964
No 216
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=20.71 E-value=97 Score=19.69 Aligned_cols=36 Identities=11% Similarity=0.229 Sum_probs=24.7
Q ss_pred HHHHHHHHhCCcEEEEee-CCeEE--EEE-ehHHHHHhhc
Q psy6637 40 KVHSIFSLVGVNHAYVTA-IGRLV--GVV-GLKEVRNDSH 75 (105)
Q Consensus 40 kv~~LF~~Lglr~l~Vt~-~GrLV--GvV-T~kDL~kaI~ 75 (105)
.+...|...++-.++|.+ +|+++ |.+ +..+|.+.|.
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~l~~~l~ 160 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNVLYAGTTPSLGELESVIK 160 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCEEEEEESCCHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEEcCCCcEEEeCCCCCHHHHHHHHH
Confidence 444455556677788875 88887 566 7777777764
No 217
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=20.45 E-value=49 Score=24.75 Aligned_cols=15 Identities=27% Similarity=0.561 Sum_probs=11.6
Q ss_pred EEee-CCeEEEEEehH
Q psy6637 54 YVTA-IGRLVGVVGLK 68 (105)
Q Consensus 54 ~Vt~-~GrLVGvVT~k 68 (105)
++.+ +|+||||+++.
T Consensus 168 Pl~~~~G~vvGI~s~~ 183 (318)
T 1te0_A 168 ALVNSLGELMGINTLS 183 (318)
T ss_dssp EEECTTCCEEEEEECC
T ss_pred ceECCCCeEEEEEeee
Confidence 4444 89999999864
No 218
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=20.21 E-value=1.2e+02 Score=22.29 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=28.4
Q ss_pred HHHHHHHHHh-------CCcEEEEee-CCeEEEEE--------ehHHHHHhhccC
Q psy6637 39 LKVHSIFSLV-------GVNHAYVTA-IGRLVGVV--------GLKEVRNDSHLS 77 (105)
Q Consensus 39 ~kv~~LF~~L-------glr~l~Vt~-~GrLVGvV--------T~kDL~kaI~~~ 77 (105)
.++...|..+ +++..||.+ +|+++.+. +..||+++|...
T Consensus 106 ~~ia~~ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 106 GTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp SHHHHHHTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 3455556665 788899997 99999986 357888877654
No 219
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=20.19 E-value=1.7e+02 Score=18.34 Aligned_cols=20 Identities=15% Similarity=0.210 Sum_probs=13.0
Q ss_pred CCcEEEEeeCCeEEEEEehH
Q psy6637 49 GVNHAYVTAIGRLVGVVGLK 68 (105)
Q Consensus 49 glr~l~Vt~~GrLVGvVT~k 68 (105)
+...+.+..+|++||.++..
T Consensus 54 ~~~~~v~~~~~~ivG~~~~~ 73 (175)
T 1yr0_A 54 GFPVIVAILDGKVAGYASYG 73 (175)
T ss_dssp TCCEEEEEETTEEEEEEEEE
T ss_pred CceEEEEEeCCcEEEEEEEe
Confidence 43333334589999999854
No 220
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=20.18 E-value=1.2e+02 Score=17.82 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=23.4
Q ss_pred HHHHHHHhCCcEEEEee-CCeEEEEE----ehHHHHHhhc
Q psy6637 41 VHSIFSLVGVNHAYVTA-IGRLVGVV----GLKEVRNDSH 75 (105)
Q Consensus 41 v~~LF~~Lglr~l~Vt~-~GrLVGvV----T~kDL~kaI~ 75 (105)
+...|...++-..++.+ +|++++.. +..+|.++|.
T Consensus 96 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 135 (138)
T 4evm_A 96 LLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLK 135 (138)
T ss_dssp HHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHH
T ss_pred HHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHH
Confidence 44455566777788884 89886654 6667776664
No 221
>1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A*
Probab=20.17 E-value=1.4e+02 Score=18.60 Aligned_cols=28 Identities=4% Similarity=0.071 Sum_probs=16.9
Q ss_pred HHHHHHHhCCcEEEEee-CCeEEEEEehH
Q psy6637 41 VHSIFSLVGVNHAYVTA-IGRLVGVVGLK 68 (105)
Q Consensus 41 v~~LF~~Lglr~l~Vt~-~GrLVGvVT~k 68 (105)
...++...+-.+++|.. +|++||.++..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~vG~~~~~ 65 (160)
T 1qst_A 37 IVKLVFDRHHESMVILKNKQKVIGGICFR 65 (160)
T ss_dssp HHHHHTSSSEEEEEEEETTTEEEEEEEEE
T ss_pred HHHHhhCCCCceEEEEecCCEEEEEEEEE
Confidence 33333333445556655 78999998864
Done!