Query psy6641
Match_columns 87
No_of_seqs 169 out of 1059
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 23:26:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ehf_A CUB and sushi domain-co 99.8 1.2E-20 4.1E-25 98.2 7.4 69 9-80 1-71 (73)
2 1gkn_A Complement receptor typ 99.8 1.5E-19 5.1E-24 102.8 7.4 76 2-79 45-127 (128)
3 2yra_A Seizure 6-like protein 99.8 2.5E-19 8.5E-24 93.3 7.5 63 16-79 4-66 (74)
4 1h03_P Complement decay-accele 99.8 2.5E-19 8.5E-24 101.4 7.1 75 3-78 41-125 (125)
5 3gov_A MAsp-1; complement, ser 99.8 1.1E-18 3.8E-23 101.9 8.9 78 3-81 53-144 (155)
6 1gkg_A Complement receptor typ 99.7 2.6E-18 8.9E-23 98.5 6.3 74 3-77 45-136 (136)
7 1srz_A Gamma-aminobutyric acid 99.7 1.8E-18 6.3E-23 88.8 4.8 60 17-78 5-67 (68)
8 2qy0_A Complement C1R subcompo 99.7 1.1E-17 3.9E-22 98.0 8.5 81 2-82 50-149 (159)
9 2a55_A C4B-binding protein; co 99.7 9E-19 3.1E-23 100.3 3.0 73 3-78 46-125 (133)
10 3erb_A Complement C2; C3/C5 co 99.7 1.2E-17 4E-22 102.5 7.5 75 3-78 41-126 (223)
11 3iyp_F Complement decay-accele 99.7 2.3E-17 8E-22 108.1 8.9 78 3-81 201-288 (381)
12 3o8e_B Membrane cofactor prote 99.7 2.1E-17 7.3E-22 102.9 7.9 76 2-78 42-125 (252)
13 1ok3_A CD55, CR, DAF, compleme 99.7 1.5E-17 5.2E-22 103.7 6.5 75 3-78 169-253 (254)
14 3tvj_A Mannan-binding lectin s 99.7 6.5E-17 2.2E-21 86.4 7.6 65 16-81 4-77 (86)
15 1ly2_A CD21, complement recept 99.7 6.9E-17 2.4E-21 91.7 7.9 76 3-79 43-130 (130)
16 2wii_C H factor 1, complement 99.7 3E-17 1E-21 103.5 5.7 75 4-79 114-195 (277)
17 3erb_A Complement C2; C3/C5 co 99.7 1.7E-16 5.7E-21 97.4 8.9 74 3-79 108-187 (223)
18 2c8i_E CD55, complement decay- 99.7 9.3E-17 3.2E-21 102.7 7.8 75 3-78 232-316 (316)
19 3sw0_X H factor 1, complement 99.7 1.2E-16 4.1E-21 95.7 7.8 74 3-80 45-124 (188)
20 3hrz_D Complement factor B; se 99.7 9E-17 3.1E-21 111.3 8.0 75 3-78 48-135 (741)
21 1qub_A Protein (human BETA2-gl 99.7 1.4E-16 4.6E-21 102.2 8.1 74 3-79 44-121 (319)
22 1ok3_A CD55, CR, DAF, compleme 99.7 1.2E-16 4.2E-21 99.5 7.5 74 3-78 110-190 (254)
23 3o8e_B Membrane cofactor prote 99.7 1.9E-16 6.4E-21 98.6 8.0 76 3-79 104-192 (252)
24 2xrb_A Complement regulatory p 99.7 2.4E-16 8.2E-21 100.0 8.4 75 3-79 78-159 (290)
25 1ly2_A CD21, complement recept 99.7 1.2E-16 4.1E-21 90.7 5.7 60 18-78 2-65 (130)
26 1qub_A Protein (human BETA2-gl 99.7 2.5E-16 8.4E-21 101.0 7.5 75 3-80 166-245 (319)
27 3gov_A MAsp-1; complement, ser 99.7 2.3E-16 8E-21 91.9 6.3 62 16-78 4-71 (155)
28 2c8i_E CD55, complement decay- 99.7 3.3E-16 1.1E-20 100.1 7.3 74 3-78 173-253 (316)
29 2wii_C H factor 1, complement 99.6 7.6E-16 2.6E-20 97.1 8.6 75 2-78 49-130 (277)
30 1rid_A Complement control prot 99.6 2.4E-16 8.2E-21 97.8 5.1 73 3-78 104-184 (244)
31 4ayi_A H factor 1, complement 99.6 5.2E-17 1.8E-21 92.1 1.7 70 3-77 53-125 (125)
32 1gkg_A Complement receptor typ 99.6 1.2E-15 4.1E-20 87.3 7.0 61 16-78 3-66 (136)
33 3iyp_F Complement decay-accele 99.6 1E-15 3.4E-20 100.4 7.4 75 3-79 142-223 (381)
34 1ntj_A Complement receptor rel 99.6 1.2E-15 4.1E-20 97.7 7.6 74 3-78 45-125 (320)
35 3r62_A H factor 1, complement 99.6 8.5E-16 2.9E-20 87.2 6.1 61 17-80 4-65 (129)
36 1rid_A Complement control prot 99.6 4.5E-16 1.5E-20 96.6 4.8 73 2-78 47-126 (244)
37 2aty_A Complement receptor chi 99.6 2.7E-15 9.2E-20 97.4 8.6 76 3-80 43-131 (376)
38 2xrb_A Complement regulatory p 99.6 1.2E-15 4E-20 96.8 6.5 75 3-78 137-229 (290)
39 1gkn_A Complement receptor typ 99.6 8.5E-16 2.9E-20 87.2 5.0 60 17-78 3-64 (128)
40 1h03_P Complement decay-accele 99.6 2.3E-15 7.7E-20 85.0 6.4 59 18-78 1-62 (125)
41 2yby_A Complement factor H; im 99.6 1.4E-16 4.8E-21 90.1 1.2 72 2-78 50-124 (124)
42 3hrz_D Complement factor B; se 99.6 6.3E-15 2.2E-19 102.2 8.8 75 3-80 117-197 (741)
43 2qy0_A Complement C1R subcompo 99.6 4.7E-15 1.6E-19 86.8 6.9 60 18-78 3-69 (159)
44 1ntj_A Complement receptor rel 99.6 5.1E-15 1.7E-19 94.8 7.5 75 3-78 104-196 (320)
45 1ntl_A CRRY-IG; immunology, co 99.6 7.5E-15 2.6E-19 99.4 8.1 76 3-79 238-319 (551)
46 3t5o_A Complement component C6 99.6 3.8E-15 1.3E-19 106.0 6.3 75 3-78 599-680 (913)
47 2uwn_A H factor 1, human compl 99.6 7.3E-16 2.5E-20 92.4 2.3 71 3-77 109-187 (187)
48 1zjk_A Mannan-binding lectin s 99.6 9.2E-15 3.1E-19 95.9 7.2 70 8-78 4-80 (403)
49 2aty_A Complement receptor chi 99.5 9E-15 3.1E-19 94.9 6.6 60 18-78 2-65 (376)
50 3r62_A H factor 1, complement 99.5 1.6E-15 5.5E-20 86.1 2.5 71 3-78 47-128 (129)
51 1haq_A Complement factor H; im 99.5 2.2E-14 7.4E-19 104.3 8.5 75 4-79 109-190 (1213)
52 2uwn_A H factor 1, human compl 99.5 3.1E-15 1.1E-19 89.6 3.1 73 3-79 52-126 (187)
53 3sw0_X H factor 1, complement 99.5 2.6E-14 8.9E-19 85.5 7.0 60 17-79 2-62 (188)
54 2gsx_A Complement receptor typ 99.5 4.8E-14 1.7E-18 100.5 8.9 76 3-79 807-890 (951)
55 1ntl_A CRRY-IG; immunology, co 99.5 4.1E-14 1.4E-18 95.8 7.3 75 3-78 102-194 (551)
56 2a55_A C4B-binding protein; co 99.5 5.5E-15 1.9E-19 84.4 1.9 59 18-78 1-63 (133)
57 2gsx_A Complement receptor typ 99.5 1.1E-13 3.7E-18 98.7 7.7 74 3-77 486-574 (951)
58 1haq_A Complement factor H; im 99.4 2.2E-13 7.4E-18 99.2 7.4 73 3-79 652-729 (1213)
59 1zjk_A Mannan-binding lectin s 99.4 4.9E-13 1.7E-17 87.7 8.4 77 3-80 62-151 (403)
60 2q7z_A Complement receptor typ 99.4 3.6E-13 1.2E-17 101.2 7.9 74 3-78 1136-1214(1931)
61 1gpz_A Complement C1R componen 99.4 3.8E-13 1.3E-17 88.0 7.0 60 18-78 1-67 (399)
62 3t5o_A Complement component C6 99.4 7.6E-14 2.6E-18 99.4 3.4 71 3-75 662-736 (913)
63 2q7z_A Complement receptor typ 99.4 7.5E-13 2.6E-17 99.5 7.9 75 2-78 41-122 (1931)
64 2yby_A Complement factor H; im 99.4 2.4E-13 8.2E-18 76.7 2.6 59 18-80 3-69 (124)
65 2b5i_D Interleukin-2 receptor 99.3 2E-12 6.7E-17 78.9 4.6 59 19-79 103-166 (217)
66 4aqb_A Mannan-binding lectin s 99.3 4.5E-12 1.5E-16 82.1 6.3 62 17-79 279-346 (361)
67 4ayi_A H factor 1, complement 99.2 7.9E-12 2.7E-16 70.6 3.1 59 17-79 4-70 (125)
68 2psm_F Interleukin-15 receptor 99.2 6.2E-11 2.1E-15 61.4 5.2 60 17-79 8-74 (78)
69 1gpz_A Complement C1R componen 99.1 4.9E-10 1.7E-14 73.3 8.5 78 3-80 49-145 (399)
70 2z3q_B Interleukin-15 receptor 98.8 7.5E-09 2.6E-13 56.1 4.7 59 17-78 5-70 (107)
71 1elv_A Complement C1S componen 98.8 2E-08 6.7E-13 64.4 6.4 61 18-80 2-70 (333)
72 2b5i_D Interleukin-2 receptor 98.7 4.4E-08 1.5E-12 59.8 6.2 57 19-79 2-64 (217)
73 4f4o_C Haptoglobin; globin fol 98.2 2.4E-06 8.4E-11 55.3 5.7 55 17-80 30-90 (347)
74 1md8_A C1R complement serine p 98.0 4E-05 1.4E-09 49.1 7.9 62 19-80 1-77 (329)
75 4aqb_A Mannan-binding lectin s 95.6 0.0037 1.3E-07 40.3 1.2 30 3-32 327-360 (361)
76 2yra_A Seizure 6-like protein 94.5 0.018 6.2E-07 28.8 1.8 22 3-24 47-72 (74)
77 3n7s_A Calcitonin gene-related 90.8 0.16 5.4E-06 28.0 2.2 33 38-70 60-95 (115)
78 1u34_A CRFR2B, corticotropin r 88.2 0.17 5.7E-06 28.1 1.1 33 38-70 60-97 (119)
79 4ers_A GL-R, glucagon receptor 88.1 0.23 8E-06 26.4 1.5 33 38-70 44-81 (96)
80 2l27_A Seven transmembrane hel 87.6 0.095 3.3E-06 27.3 -0.2 31 40-70 36-71 (84)
81 3c5t_A Glucagon-like peptide 1 86.7 0.38 1.3E-05 26.7 1.9 32 38-69 52-88 (122)
82 2jod_A Pituitary adenylate cyc 86.4 0.66 2.3E-05 25.1 2.7 33 38-71 51-89 (106)
83 2x57_A Vasoactive intestinal p 86.2 0.25 8.4E-06 27.3 1.0 33 38-71 63-99 (116)
84 2qkh_A Glucose-dependent insul 85.7 0.25 8.5E-06 28.0 0.9 34 37-70 70-108 (135)
85 2xdg_A Growth hormone-releasin 80.6 0.51 1.7E-05 24.8 0.8 33 38-71 37-73 (92)
86 3n94_A Fusion protein of malto 74.8 0.78 2.7E-05 30.3 0.5 34 39-74 418-457 (475)
87 2xtt_A Protease inhibitor SGPI 65.7 3.6 0.00012 17.8 1.5 23 47-69 3-26 (36)
88 3h3g_A Fusion protein of malto 60.5 5 0.00017 27.0 2.1 33 38-70 467-502 (539)
89 1nzi_A Complement C1S componen 54.2 13 0.00045 20.6 3.0 21 42-63 137-157 (159)
90 4dlq_A Latrophilin-1; GAIN dom 45.1 17 0.00059 23.6 2.8 39 37-77 36-77 (381)
91 1wo9_A HI-1, trypsin inhibitor 39.4 21 0.00072 15.1 1.7 13 58-70 15-27 (35)
92 2bz6_L Blood coagulation facto 35.3 18 0.00063 16.5 1.3 20 43-63 20-39 (53)
93 1vmo_A Vitelline membrane oute 33.7 28 0.00094 20.2 2.1 31 41-76 103-133 (163)
94 2jkh_L Factor X light chain; p 33.0 21 0.00072 16.3 1.3 13 45-57 23-35 (55)
95 2wph_E Coagulation factor IXA 32.3 19 0.00067 16.8 1.1 19 44-63 21-39 (59)
96 1kig_L Factor XA; glycoprotein 30.9 18 0.00063 16.3 0.9 17 46-63 21-37 (51)
97 1szb_A Mannose binding lectin- 29.9 32 0.0011 19.3 2.0 19 44-63 148-166 (170)
98 4dlo_A Brain-specific angiogen 26.3 20 0.00068 23.4 0.7 39 37-77 32-74 (382)
99 1apq_A Complement protease C1R 25.0 47 0.0016 14.5 1.8 14 44-57 33-46 (53)
100 2kl7_A Fibulin-4; secreted, ca 24.1 27 0.00093 17.0 0.9 11 47-57 56-66 (71)
101 2jne_A Hypothetical protein YF 20.1 1E+02 0.0035 16.4 2.6 19 41-59 77-95 (101)
No 1
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=98.19 Aligned_cols=69 Identities=26% Similarity=0.434 Sum_probs=62.1
Q ss_pred eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEeecc
Q psy6641 9 LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVRWC 80 (87)
Q Consensus 9 ~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~~ 80 (87)
.|+...| +.+.|+.|+.+.||.+.. ..|.+|++|+|+|++||.|.|+..++|+++|+|+.+ .|.|++.+
T Consensus 1 Gws~~~p~C~~~~C~~p~~p~nG~~~~--~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~-~P~C~~~c 71 (73)
T 2ehf_A 1 GSSGSSGEIEKGGCGDPGIPAYGKRTG--SSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGN-KPSCSGPS 71 (73)
T ss_dssp CCCCCCCCCCCCCSCCCCCCSSSEEEC--SCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSC-CCCBCCCC
T ss_pred CCCCCCCeEeeeECcCCCCCCCCEEeC--CcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCC-CCeEeccc
Confidence 3888877 688999999999999873 578899999999999999999999999999999997 99998765
No 2
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.80 E-value=1.5e-19 Score=102.78 Aligned_cols=76 Identities=24% Similarity=0.557 Sum_probs=67.4
Q ss_pred eeeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCc---cCCCCCC
Q psy6641 2 VNMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQ---WMPEGIP 74 (87)
Q Consensus 2 ~~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---Ws~~~~p 74 (87)
..++|+ |+|+...| +.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+|+ |+.. .|
T Consensus 45 ~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~-~P 122 (128)
T 1gkn_A 45 FSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI-TDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK-PP 122 (128)
T ss_dssp EEEEBCSSSCBCCCCSCCEECBCCCCCCCTTEEEEES-SCCBTTCEEEEEECTTEECCSCSEEEEEECSSSEEESSC-CC
T ss_pred CceEECCCCcCCCCCCeEcceECcCCCCCCCcEEEec-cCCccCCEEEEEeCCCCEEccCCceEEcCCCCcCCccCC-CC
Confidence 367998 89998777 4678999999999999765 46889999999999999999999999999999 9997 99
Q ss_pred eEeec
Q psy6641 75 FCVRW 79 (87)
Q Consensus 75 ~C~~~ 79 (87)
.|++.
T Consensus 123 ~C~~i 127 (128)
T 1gkn_A 123 ICQRI 127 (128)
T ss_dssp CCEEC
T ss_pred EeeEC
Confidence 99864
No 3
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=2.5e-19 Score=93.35 Aligned_cols=63 Identities=22% Similarity=0.474 Sum_probs=57.4
Q ss_pred CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEeec
Q psy6641 16 EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVRW 79 (87)
Q Consensus 16 ~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~ 79 (87)
..+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+.+|+|+.. .|.|++.
T Consensus 4 ~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~-~P~C~~v 66 (74)
T 2yra_A 4 GSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSD-PPFCEKT 66 (74)
T ss_dssp CCCCCCCCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSC-CCEEEEC
T ss_pred cCCcCcCCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCC-CCEEeec
Confidence 35689999999999998766679999999999999999999999999999999997 9999974
No 4
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.79 E-value=2.5e-19 Score=101.39 Aligned_cols=75 Identities=21% Similarity=0.389 Sum_probs=66.2
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCC---CCccCCCC
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDK---TGQWMPEG 72 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~---~g~Ws~~~ 72 (87)
.++|+ | .|+...| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|+.+
T Consensus 41 ~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~- 119 (125)
T 1h03_P 41 SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGP- 119 (125)
T ss_dssp EEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEESCSEEEEEEETTEEEESSC-
T ss_pred eeEEcCCCCCCEeCCCCCcCCCCcCCCCCCCCCCEEeCCcCceecCCEEEEEECCCCEECCCCeeEEecCCCCCEECCC-
Confidence 57898 6 8998888 5778999999999998766567899999999999999999999999984 6999997
Q ss_pred CCeEee
Q psy6641 73 IPFCVR 78 (87)
Q Consensus 73 ~p~C~~ 78 (87)
+|.|++
T Consensus 120 ~P~C~~ 125 (125)
T 1h03_P 120 PPECRG 125 (125)
T ss_dssp CCEEEC
T ss_pred CceecC
Confidence 999974
No 5
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.78 E-value=1.1e-18 Score=101.87 Aligned_cols=78 Identities=26% Similarity=0.636 Sum_probs=68.0
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCCC-EEc--CCCceeeCCCCccCC---
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFS--NETLSPGTVATYACERGF-ELL--GPSRRVCDKTGQWMP--- 70 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy-~l~--G~~~~~C~~~g~Ws~--- 70 (87)
.++|+ |+|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++|| .|. |+..++|+++|+|+.
T Consensus 53 ~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~Ws~~~~ 132 (155)
T 3gov_A 53 QIECLKDGTWSNKIPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVL 132 (155)
T ss_dssp EEEBCTTSCBSSCCCEEEECBCCSCCCCTTEEEEESSTTCCCBTTCEEEEEECTTTEEECTTCCCEEEECTTSCEEBTTT
T ss_pred EEEECCCCeEcCCCCeeeEccCCCCCCCcCceEEecCCCCccccCCEEEEEeCCChhhhccCCCceEEECCCCeECCCcC
Confidence 68999 89998878 5678999999999999753 467889999999999997 888 889999999999997
Q ss_pred --CCCCeEeeccc
Q psy6641 71 --EGIPFCVRWCT 81 (87)
Q Consensus 71 --~~~p~C~~~~~ 81 (87)
. .|.|++.|.
T Consensus 133 ~~~-~P~C~~vC~ 144 (155)
T 3gov_A 133 GRS-LPTCLPVCG 144 (155)
T ss_dssp BTS-CCCEEECCS
T ss_pred CCC-CCcCCCccC
Confidence 6 899998643
No 6
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.75 E-value=2.6e-18 Score=98.49 Aligned_cols=74 Identities=27% Similarity=0.588 Sum_probs=65.6
Q ss_pred eeEEc--ce---ecCCCC--CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCC------CEEcCCCceeeCCC---
Q psy6641 3 NMKCH--NL---VLPEVS--EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERG------FELLGPSRRVCDKT--- 65 (87)
Q Consensus 3 ~~~C~--g~---W~~~~~--~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--- 65 (87)
.++|+ |+ |+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++| |.|.|+..++|+.+
T Consensus 45 ~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~ 124 (136)
T 1gkg_A 45 SAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQ 124 (136)
T ss_dssp EEEEEECSSSEEESSCCCCEEECCCCCCCCCTTCCBCSSCSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSS
T ss_pred ceEEeCCCccccccCCCCCEEeecCCCCCCCCCCeEEcCCCCccccCCEEEEEeCCCCCccceEEEeCCCeeEECCCCCC
Confidence 57999 77 998877 5678999999999998764 36788999999999999 99999999999998
Q ss_pred -CccCCCCCCeEe
Q psy6641 66 -GQWMPEGIPFCV 77 (87)
Q Consensus 66 -g~Ws~~~~p~C~ 77 (87)
|+|+.+ +|.|+
T Consensus 125 ~G~Ws~~-~P~C~ 136 (136)
T 1gkg_A 125 VGIWSGP-APQCI 136 (136)
T ss_dssp SCCCSCC-CCEEC
T ss_pred CCEECCC-CcccC
Confidence 999997 99995
No 7
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.74 E-value=1.8e-18 Score=88.75 Aligned_cols=60 Identities=25% Similarity=0.558 Sum_probs=52.2
Q ss_pred cccCC-CCCCCCCeEEEec--CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEee
Q psy6641 17 YEECR-FPGAPAHSSIVFS--NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 17 ~~~C~-~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
.+.|+ +++.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+ +|+|+.+ .|.|+.
T Consensus 5 ~~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~-~P~C~~ 67 (68)
T 1srz_A 5 VRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTP-KPHCQV 67 (68)
T ss_dssp SSSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSC-CCCEEE
T ss_pred eeECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCCcCEEC-CCEEeCC-CCEeeE
Confidence 35795 5677899999864 34588999999999999999999999998 9999998 999985
No 8
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=98.02 Aligned_cols=81 Identities=17% Similarity=0.416 Sum_probs=66.4
Q ss_pred eeeEEc--ceecCCCC--CcccCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCCCEEc----CC-----CceeeCCCC
Q psy6641 2 VNMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFS--NETLSPGTVATYACERGFELL----GP-----SRRVCDKTG 66 (87)
Q Consensus 2 ~~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy~l~----G~-----~~~~C~~~g 66 (87)
..++|+ |+|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++||.|. |+ ..++|+++|
T Consensus 50 ~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G 129 (159)
T 2qy0_A 50 FTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQG 129 (159)
T ss_dssp CEEEBCTTSCBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTS
T ss_pred eEEECCCCCcCcCCCCccccccCCCCCCCCCCeeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCc
Confidence 368998 99998877 4679999999999999875 367889999999999999876 54 789999999
Q ss_pred ccCCC----CCCeEeecccc
Q psy6641 67 QWMPE----GIPFCVRWCTG 82 (87)
Q Consensus 67 ~Ws~~----~~p~C~~~~~~ 82 (87)
+|+.+ ..|.|++.|..
T Consensus 130 ~Ws~~~~~~~~P~C~~~C~~ 149 (159)
T 2qy0_A 130 IWKNEQKGEKIPRCLPVCGK 149 (159)
T ss_dssp SEEBTTTBTSCCCEEECCSC
T ss_pred cCCCCCCCccCCceeCCCCC
Confidence 99972 17999987543
No 9
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.73 E-value=9e-19 Score=100.27 Aligned_cols=73 Identities=25% Similarity=0.612 Sum_probs=64.7
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |+|+. .| +.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+| +|+.+ +|.
T Consensus 46 ~~~C~~~G~Ws~-~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G~~~~Ws~~-~p~ 122 (133)
T 2a55_A 46 TLTCNSDGEWVY-NTFCIYKRCRHPGELRNGQVEIK-TDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHP-LPQ 122 (133)
T ss_dssp CCEECSSSSEEC-CCCSEECBCCCCCCCTTBCCCCC-STTBSSCBCCCCBCTTCBCCSCSCCBCCCCSSSCCCSCC-CCC
T ss_pred EEEECCCCeECC-CCcCccCCCcCCCccCCceEEcC-CCCcCCCEEEEEcCCCCEEcCCCeeEecCCCCCCEeCCC-Ccc
Confidence 57999 89999 66 4578999999999988753 5688999999999999999999999999999 99998 999
Q ss_pred Eee
Q psy6641 76 CVR 78 (87)
Q Consensus 76 C~~ 78 (87)
|..
T Consensus 123 C~~ 125 (133)
T 2a55_A 123 CEI 125 (133)
T ss_dssp CBC
T ss_pred ccc
Confidence 874
No 10
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=102.50 Aligned_cols=75 Identities=21% Similarity=0.381 Sum_probs=67.1
Q ss_pred eeEEc--ceecCC-------CC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCC
Q psy6641 3 NMKCH--NLVLPE-------VS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPE 71 (87)
Q Consensus 3 ~~~C~--g~W~~~-------~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~ 71 (87)
.++|+ |+|+.. .| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+.+|+|+..
T Consensus 41 ~~~C~~~G~Ws~~~~~~~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~ 120 (223)
T 3erb_A 41 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGE 120 (223)
T ss_dssp EEEECTTSCEECC-------CCEEEECEEECCSCCTTEEEESCCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSC
T ss_pred eeEECCCCeECCCccCCCCCCCeEeeeECcCCCCCCCCEEecCCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCC
Confidence 47898 899984 55 56789999999999998766778999999999999999999999999999999997
Q ss_pred CCCeEee
Q psy6641 72 GIPFCVR 78 (87)
Q Consensus 72 ~~p~C~~ 78 (87)
.|.|++
T Consensus 121 -~P~C~~ 126 (223)
T 3erb_A 121 -TAVCDN 126 (223)
T ss_dssp -CCEEEC
T ss_pred -CCEEEe
Confidence 999996
No 11
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=108.07 Aligned_cols=78 Identities=21% Similarity=0.363 Sum_probs=67.6
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeC---CCCccCCCC
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCD---KTGQWMPEG 72 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~---~~g~Ws~~~ 72 (87)
.++|. | .|+...| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+ ++|+|+++
T Consensus 201 ~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~~~~G~Ws~~- 279 (381)
T 3iyp_F 201 SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGP- 279 (381)
T ss_dssp EEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEEETCCSCCBTTCEEEEEECTTCEEESCSEEEEECTTSSCEESSC-
T ss_pred ceEEecCCCcceEcCCCCeeeeeecCCCCCCCCCeEecCCCCeecCCEEEEEeCCCCEeCCCCcEEecccCCCCEEcCC-
Confidence 57898 6 7998888 577899999999999987767799999999999999999999999998 47999997
Q ss_pred CCeEeeccc
Q psy6641 73 IPFCVRWCT 81 (87)
Q Consensus 73 ~p~C~~~~~ 81 (87)
.|.|++...
T Consensus 280 ~P~C~~~~~ 288 (381)
T 3iyp_F 280 PPECRGKSL 288 (381)
T ss_dssp CCEEEC---
T ss_pred CCeEeCCCC
Confidence 999998653
No 12
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=99.72 E-value=2.1e-17 Score=102.88 Aligned_cols=76 Identities=25% Similarity=0.532 Sum_probs=67.8
Q ss_pred eeeEEc--ceecC-CCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCC
Q psy6641 2 VNMKCH--NLVLP-EVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGI 73 (87)
Q Consensus 2 ~~~~C~--g~W~~-~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~ 73 (87)
..++|+ |+|++ ..+ +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+.+| +|+.. .
T Consensus 42 ~~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~-~ 120 (252)
T 3o8e_B 42 THTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGK-P 120 (252)
T ss_dssp CEEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEEETTSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSC-C
T ss_pred CeEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEeecCCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCC-C
Confidence 358998 89998 466 568999999999999988767799999999999999999999999999888 89997 9
Q ss_pred CeEee
Q psy6641 74 PFCVR 78 (87)
Q Consensus 74 p~C~~ 78 (87)
|.|++
T Consensus 121 P~C~~ 125 (252)
T 3o8e_B 121 PICEK 125 (252)
T ss_dssp CEEEE
T ss_pred CeEee
Confidence 99987
No 13
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=99.71 E-value=1.5e-17 Score=103.66 Aligned_cols=75 Identities=21% Similarity=0.389 Sum_probs=66.2
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCC---CCccCCCC
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDK---TGQWMPEG 72 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~---~g~Ws~~~ 72 (87)
.++|. | +|+...| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|+.+
T Consensus 169 ~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~- 247 (254)
T 1ok3_A 169 SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGP- 247 (254)
T ss_dssp EEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEEEESEEEEEEETTEEEESSC-
T ss_pred ceEEEeCCCcccccCCCCccccccCCCCCCCCCceEecCCCcccCCCEEEEECCCCCeEcCCCceEEeccCCCCEECCC-
Confidence 57898 6 8998888 5679999999999998765567999999999999999999999999984 7999997
Q ss_pred CCeEee
Q psy6641 73 IPFCVR 78 (87)
Q Consensus 73 ~p~C~~ 78 (87)
+|.|++
T Consensus 248 ~P~C~~ 253 (254)
T 1ok3_A 248 PPECRG 253 (254)
T ss_dssp CCEEEC
T ss_pred CCCccc
Confidence 999974
No 14
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.71 E-value=6.5e-17 Score=86.36 Aligned_cols=65 Identities=22% Similarity=0.532 Sum_probs=56.3
Q ss_pred CcccCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCC-CEEcCC-CceeeCCCCccC-----CCCCCeEeeccc
Q psy6641 16 EYEECRFPGAPAHSSIVFS--NETLSPGTVATYACERG-FELLGP-SRRVCDKTGQWM-----PEGIPFCVRWCT 81 (87)
Q Consensus 16 ~~~~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~g-y~l~G~-~~~~C~~~g~Ws-----~~~~p~C~~~~~ 81 (87)
+.+.|+.|+.+.||.+... ...|.++++|+|+|++| |.|.|+ ..++|+++|+|+ .. +|.|.+.+.
T Consensus 4 ~~v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~-~P~C~~vCg 77 (86)
T 3tvj_A 4 TIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKS-LPVCEPVCG 77 (86)
T ss_dssp CCCBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCS-CCCEEECCC
T ss_pred eeeeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCC-CCeeECcCC
Confidence 4678999999999998753 35789999999999995 789998 899999999999 66 999998653
No 15
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.70 E-value=6.9e-17 Score=91.72 Aligned_cols=76 Identities=22% Similarity=0.476 Sum_probs=62.1
Q ss_pred eeEEc------ceecCCCC--Cc----ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCC
Q psy6641 3 NMKCH------NLVLPEVS--EY----EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 3 ~~~C~------g~W~~~~~--~~----~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~ 70 (87)
.++|+ |+|+...| +. +.|+.| .+.||.+......|.+|++|+|+|++||.|.|+..++|+++|+|+.
T Consensus 43 ~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p-~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~ 121 (130)
T 1ly2_A 43 SLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP-IVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGP 121 (130)
T ss_dssp EEEEECSSSSSCEESSCCCEEEECCTTCEECCC-CCTTEEEEECCSSEETTCEEEEEECTTEEEESCSEEEECTTSSEES
T ss_pred eeEEeCCCCCCCeECCCCCeeEcccCccCCcCC-CCCCCeEecCcccccCCCEEEEEeCCCCEEeCCCceEECCCCEECC
Confidence 47884 79998877 33 789988 5667877654457899999999999999999999999999999997
Q ss_pred CCCCeEeec
Q psy6641 71 EGIPFCVRW 79 (87)
Q Consensus 71 ~~~p~C~~~ 79 (87)
...|.|+++
T Consensus 122 ~~~P~C~~i 130 (130)
T 1ly2_A 122 TRLPTCVSI 130 (130)
T ss_dssp SCCCEEEEC
T ss_pred CCCccceEC
Confidence 217999863
No 16
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=99.69 E-value=3e-17 Score=103.54 Aligned_cols=75 Identities=24% Similarity=0.525 Sum_probs=66.2
Q ss_pred eEEc-ceecCCCC--CcccCCCCCCCCCeEEEe----cCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 4 MKCH-NLVLPEVS--EYEECRFPGAPAHSSIVF----SNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 4 ~~C~-g~W~~~~~--~~~~C~~p~~~~~g~~~~----~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
++|+ +.|+...| +.+.|+.|+.+.||.+.. ....|.+|++|+|+|++||.|.|+..++|+.+|+|+.. .|.|
T Consensus 114 r~C~~~gWs~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~-~P~C 192 (277)
T 2wii_C 114 RECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKE-KPKC 192 (277)
T ss_dssp EEBCSSSBCSCCCEEEECEECCCCCCTTEECCSSSSCTTCCEETTBEEECEECTTEEEESCSEEEBCTTSSBSSC-CCEE
T ss_pred eEeCCCCcCCCCCcccceeCCCCCcccCCeEEecccccCCcccCCCEEEEEcCCCccCcCCCCCEECCCCeECCC-CCee
Confidence 3899 44998888 567899999999999876 34678999999999999999999999999999999987 9999
Q ss_pred eec
Q psy6641 77 VRW 79 (87)
Q Consensus 77 ~~~ 79 (87)
++.
T Consensus 193 ~~v 195 (277)
T 2wii_C 193 VEI 195 (277)
T ss_dssp EEC
T ss_pred eee
Confidence 874
No 17
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.7e-16 Score=97.36 Aligned_cols=74 Identities=23% Similarity=0.485 Sum_probs=62.6
Q ss_pred eeEEc--ceecCCCC--Cc--ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 3 NMKCH--NLVLPEVS--EY--EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~--~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
.++|. |+|+...| +. +.|+.|.. .+|.+.. ...|.+|++|+|+|++||.|.|+..++|+++|+|+.. .|.|
T Consensus 108 ~~~C~~~G~Ws~~~P~C~~~~~~C~~p~~-~~g~~~~-~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~-~P~C 184 (223)
T 3erb_A 108 VRQCRPNGMWDGETAVCDNGAGHCPNPGI-SLGAVRT-GFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGT-EPIC 184 (223)
T ss_dssp EEEBCTTSCBSSCCCEEECSCSSSCCCCC-CTTEEEE-CCCCSTTCEEEEEECTTCEEESCSEEEBCTTSCBSSC-CCEE
T ss_pred ceEECCCCeECCCCCEEEeCCccCcCCCC-CCCcEec-CCCCCCCCEEEEEeCCCCEEcCCCceEECCCCeECCC-CCEE
Confidence 57898 89998888 33 78998764 4666543 3578899999999999999999999999999999997 9999
Q ss_pred eec
Q psy6641 77 VRW 79 (87)
Q Consensus 77 ~~~ 79 (87)
++.
T Consensus 185 ~~~ 187 (223)
T 3erb_A 185 RQP 187 (223)
T ss_dssp ECG
T ss_pred eCC
Confidence 984
No 18
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=99.69 E-value=9.3e-17 Score=102.67 Aligned_cols=75 Identities=21% Similarity=0.389 Sum_probs=66.2
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCC---CCccCCCC
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDK---TGQWMPEG 72 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~---~g~Ws~~~ 72 (87)
.++|+ | +|+...| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|+.+
T Consensus 232 ~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~~~~g~Ws~~- 310 (316)
T 2c8i_E 232 SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGP- 310 (316)
T ss_pred cEEEecCCCcccccCCCCccccccCCCCCccCcceEecCCCcccCCCEEEEEcCCCCeEcCCCceEeecCCCCCeECCC-
Confidence 57898 5 7998877 5678999999999998876677999999999999999999999999985 6999997
Q ss_pred CCeEee
Q psy6641 73 IPFCVR 78 (87)
Q Consensus 73 ~p~C~~ 78 (87)
+|.|++
T Consensus 311 ~P~C~~ 316 (316)
T 2c8i_E 311 PPECRG 316 (316)
T ss_pred CCeeCC
Confidence 999963
No 19
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.69 E-value=1.2e-16 Score=95.74 Aligned_cols=74 Identities=23% Similarity=0.486 Sum_probs=63.5
Q ss_pred eeEEc-ceecCCCC--Ccc--cCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 3 NMKCH-NLVLPEVS--EYE--ECRFPGAPAHSSIVFS-NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 3 ~~~C~-g~W~~~~~--~~~--~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
.++|+ |+|+. .| +.+ .|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+ +|+|+. +|.|
T Consensus 45 ~~~C~~g~Ws~-~p~C~~~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~--~P~C 120 (188)
T 3sw0_X 45 EVMCLNGNWTE-PPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE--PPKC 120 (188)
T ss_dssp EEEEETTEECC-CCEEECTTCCBCSCCCCTTEEESSCCCSCBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC--CCEE
T ss_pred EEEeCCCEeCC-CCccCcCCCcCCCCCccCCCeEecCCCCcccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC--CCcc
Confidence 57999 99996 46 343 8999999999998753 46788999999999999999999999998 999996 5999
Q ss_pred eecc
Q psy6641 77 VRWC 80 (87)
Q Consensus 77 ~~~~ 80 (87)
++.+
T Consensus 121 ~~~C 124 (188)
T 3sw0_X 121 LHPC 124 (188)
T ss_dssp ECCE
T ss_pred cccC
Confidence 9754
No 20
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.68 E-value=9e-17 Score=111.33 Aligned_cols=75 Identities=16% Similarity=0.353 Sum_probs=67.6
Q ss_pred eeEEc--ceecCC---------CC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccC
Q psy6641 3 NMKCH--NLVLPE---------VS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWM 69 (87)
Q Consensus 3 ~~~C~--g~W~~~---------~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws 69 (87)
.++|+ |+|+.. .| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+.+|+|+
T Consensus 48 ~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws 127 (741)
T 3hrz_D 48 TRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWS 127 (741)
T ss_dssp EEEBCTTSCBCCEECTTCCEESCCEEEECEECCCSCCTTEEEECCCSSEETTCEEEEEECTTCEEESCSEEEBCTTSCBS
T ss_pred eEEECCCCcCCCCCcccccCcCCCeEEeeECcCCCCCCCCEEeccCCCcccCCEEEEEECCCCccCCCcceEecCCCeEc
Confidence 57997 889974 44 467899999999999988777899999999999999999999999999999999
Q ss_pred CCCCCeEee
Q psy6641 70 PEGIPFCVR 78 (87)
Q Consensus 70 ~~~~p~C~~ 78 (87)
.+ .|.|++
T Consensus 128 ~~-~p~C~~ 135 (741)
T 3hrz_D 128 GQ-TAICDN 135 (741)
T ss_dssp SC-CCEEEC
T ss_pred cC-cCeeec
Confidence 98 999995
No 21
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=99.68 E-value=1.4e-16 Score=102.21 Aligned_cols=74 Identities=24% Similarity=0.604 Sum_probs=66.0
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEee
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
.++|+ |.|+...| +.+.|+.|+.+.||.+... .|.+|++|+|+|++||.|.|+..++|+.+|+|+.+ .|.|++
T Consensus 44 ~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~~--~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~-~P~C~~ 120 (319)
T 1qub_A 44 KFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYT--TFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPE-LPVCAP 120 (319)
T ss_dssp EEECCTTSCCCCCCCCEEECBCCCCCCCTTEEEECS--CSBTTCEEEEEECTTEEEESCSEEEECTTSCEESC-CCEEEE
T ss_pred eEEECCCCEECCCCCeECccCCcCCCCCCCccEecC--CcccCCEEEEECCCCceeCCCCceEECCCCeECCC-CCCCcc
Confidence 57998 88998777 4679999999999999753 57889999999999999999999999999999997 999987
Q ss_pred c
Q psy6641 79 W 79 (87)
Q Consensus 79 ~ 79 (87)
.
T Consensus 121 ~ 121 (319)
T 1qub_A 121 I 121 (319)
T ss_dssp C
T ss_pred C
Confidence 3
No 22
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=99.68 E-value=1.2e-16 Score=99.55 Aligned_cols=74 Identities=23% Similarity=0.551 Sum_probs=66.2
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |.|+...| +.+.|+.|+.+.||.+... ..+.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.
T Consensus 110 ~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~-~P~ 187 (254)
T 1ok3_A 110 KLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDP-LPE 187 (254)
T ss_dssp EEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECT-TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSC-CCE
T ss_pred eEEECCCCeECCCCCeeCccCCcCCCCCCCCEEEcC-CCcEEcCEEEEECCCCceeCCCcceEEEeCCCcccccCC-CCc
Confidence 57998 89998877 5678999999999999864 4578899999999999999999999999888 89997 999
Q ss_pred Eee
Q psy6641 76 CVR 78 (87)
Q Consensus 76 C~~ 78 (87)
|++
T Consensus 188 C~~ 190 (254)
T 1ok3_A 188 CRE 190 (254)
T ss_dssp EEE
T ss_pred ccc
Confidence 987
No 23
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=99.67 E-value=1.9e-16 Score=98.59 Aligned_cols=76 Identities=24% Similarity=0.416 Sum_probs=66.7
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEecC-CCcCCCCEEEEEcCC-----CCEEcCCCceeeCCCCccC
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFSN-ETLSPGTVATYACER-----GFELLGPSRRVCDKTGQWM 69 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~~-~~~~~g~~~~~~C~~-----gy~l~G~~~~~C~~~g~Ws 69 (87)
.++|+ | .|+...| +.+.|+.|+.+.||.+.... ..|.+|++|+|+|+. ||.|.|+..++|+.+|+|+
T Consensus 104 ~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws 183 (252)
T 3o8e_B 104 ILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWS 183 (252)
T ss_dssp EEEEEESSSCEEESSCCCEEEECEECCCCCCTTEEESSTTCCCEETTCEEEEEECCCSSSSCCEEESCSEEEBCTTSSBS
T ss_pred EEEEeCCCCCCeeCCCCCeEeeeEcCCCCCCCCCcEeccCCceecCCCEEEEEeCCCCCCCCeEEeCCCceEECCCCeEC
Confidence 57898 6 7998888 56789999999999987643 568899999999998 8999999999999999999
Q ss_pred CCCCCeEeec
Q psy6641 70 PEGIPFCVRW 79 (87)
Q Consensus 70 ~~~~p~C~~~ 79 (87)
.. .|.|++.
T Consensus 184 ~~-~P~C~~v 192 (252)
T 3o8e_B 184 RA-APECKVV 192 (252)
T ss_dssp SC-CCEEECC
T ss_pred CC-CCEEeee
Confidence 97 9999864
No 24
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=99.67 E-value=2.4e-16 Score=99.96 Aligned_cols=75 Identities=23% Similarity=0.572 Sum_probs=66.0
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |+|+...| +.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.
T Consensus 78 ~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~-~P~ 155 (290)
T 2xrb_A 78 SITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAE-API 155 (290)
T ss_dssp EEEECTTSCEECCTTCSCBCBCCCCCCCTTEEEEES-SCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSC-CCE
T ss_pred eEEECCCCeECCCCCCcCcCCCcCCCCCCCceEecC-CCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCC-CCe
Confidence 57998 89997766 5679999999999999764 4588999999999999999999999999888 79997 999
Q ss_pred Eeec
Q psy6641 76 CVRW 79 (87)
Q Consensus 76 C~~~ 79 (87)
|++.
T Consensus 156 C~~v 159 (290)
T 2xrb_A 156 CESI 159 (290)
T ss_dssp EEEC
T ss_pred eccc
Confidence 9973
No 25
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.66 E-value=1.2e-16 Score=90.71 Aligned_cols=60 Identities=27% Similarity=0.593 Sum_probs=54.9
Q ss_pred ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCC----CCccCCCCCCeEee
Q psy6641 18 EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDK----TGQWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~----~g~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|+.+ .|.|++
T Consensus 2 i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~-~P~C~~ 65 (130)
T 1ly2_A 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP-APKCEY 65 (130)
T ss_dssp CEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSC-CCEEEE
T ss_pred ccCCCCCCCCCCeEecCCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCC-CCeeEc
Confidence 68999999999999876677899999999999999999999999986 7999997 999985
No 26
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=99.66 E-value=2.5e-16 Score=101.00 Aligned_cols=75 Identities=28% Similarity=0.649 Sum_probs=65.6
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCV 77 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~ 77 (87)
.++|+ |+|+. .| +.+.|+.|+.+.||.+... ...|.+|++|+|.|++||.|.|+..++|+++|+|+. .|.|+
T Consensus 166 ~~~C~~~G~Ws~-~P~C~~v~C~~p~~~~nG~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~--~P~C~ 242 (319)
T 1qub_A 166 TITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA--MPSCK 242 (319)
T ss_dssp EEEBCTTSSBSC-CCEEEECEECCCCCCTTEEEECCSCSSEETTCEEEEEECTTEEESSCSEEEBCTTSSBSC--CCCEE
T ss_pred eEEECCCCeECC-CCceeccCCCCCCCCCCCeEecCCCCccccCCEEEEEcCCCCEECCCCCeEECCCCcCCC--CCCcc
Confidence 57898 99997 56 4678999999999999764 357889999999999999999999999999999995 69999
Q ss_pred ecc
Q psy6641 78 RWC 80 (87)
Q Consensus 78 ~~~ 80 (87)
+.+
T Consensus 243 ~~C 245 (319)
T 1qub_A 243 ASC 245 (319)
T ss_dssp ECB
T ss_pred CcC
Confidence 754
No 27
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.65 E-value=2.3e-16 Score=91.95 Aligned_cols=62 Identities=26% Similarity=0.460 Sum_probs=56.1
Q ss_pred CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCC------ceeeCCCCccCCCCCCeEee
Q psy6641 16 EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPS------RRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 16 ~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~Ws~~~~p~C~~ 78 (87)
+.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|.. .++|+.+|+|+.. .|.|++
T Consensus 4 ~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~-~p~C~~ 71 (155)
T 3gov_A 4 TGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNK-IPTCKI 71 (155)
T ss_dssp -CCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSC-CCEEEE
T ss_pred cceeCCCCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCC-CCeeeE
Confidence 4578999999999999887778999999999999999999876 7999999999997 899996
No 28
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=99.65 E-value=3.3e-16 Score=100.10 Aligned_cols=74 Identities=23% Similarity=0.551 Sum_probs=65.9
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |.|+...| +.+.|+.|+.+.||.+... ..+.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.
T Consensus 173 ~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~-~P~ 250 (316)
T 2c8i_E 173 KLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDP-LPE 250 (316)
T ss_pred eEEECCCCcCCCCCCceeeeeCcCCCCcCCCEEEcC-CCceeCCEEEEEeCCcceECCCccEEEecCCCcccccCC-CCc
Confidence 57898 89998877 5778999999999999764 4578899999999999999999999999887 89997 999
Q ss_pred Eee
Q psy6641 76 CVR 78 (87)
Q Consensus 76 C~~ 78 (87)
|++
T Consensus 251 C~~ 253 (316)
T 2c8i_E 251 CRE 253 (316)
T ss_pred ccc
Confidence 986
No 29
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=99.65 E-value=7.6e-16 Score=97.09 Aligned_cols=75 Identities=27% Similarity=0.657 Sum_probs=65.1
Q ss_pred eeeEEc-ceecCCCC----CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCCCEEcCCCce-eeCCCCccCCCCCC
Q psy6641 2 VNMKCH-NLVLPEVS----EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERGFELLGPSRR-VCDKTGQWMPEGIP 74 (87)
Q Consensus 2 ~~~~C~-g~W~~~~~----~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~-~C~~~g~Ws~~~~p 74 (87)
..++|. |.|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+..+ +|+.+| |+.. .|
T Consensus 49 ~~~~C~~g~Ws~~~P~~~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~-~P 126 (277)
T 2wii_C 49 IIMVCRKGEWVALNPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTND-IP 126 (277)
T ss_dssp EEEEECSSSEEESCSSCCCEECBCCCCCCCTTEEEEEESSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSC-CC
T ss_pred ceEEcCCCeeeCCCCCccccccCCcCCCCCCCCEEEecCCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCC-CC
Confidence 357999 99997654 4578999999999998764 36789999999999999999998876 999999 9997 99
Q ss_pred eEee
Q psy6641 75 FCVR 78 (87)
Q Consensus 75 ~C~~ 78 (87)
.|++
T Consensus 127 ~C~~ 130 (277)
T 2wii_C 127 ICEV 130 (277)
T ss_dssp EEEE
T ss_pred cccc
Confidence 9985
No 30
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=99.63 E-value=2.4e-16 Score=97.81 Aligned_cols=73 Identities=27% Similarity=0.604 Sum_probs=64.0
Q ss_pred eeEEc-c-----eecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCC
Q psy6641 3 NMKCH-N-----LVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIP 74 (87)
Q Consensus 3 ~~~C~-g-----~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p 74 (87)
.++|+ + .|+...| +.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. |+|+ . .|
T Consensus 104 ~~~C~~~~g~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-g~Ws-~-~P 180 (244)
T 1rid_A 104 KSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSG-GEWS-D-PP 180 (244)
T ss_dssp SBCBCCSSSSCCSBSSCSCCEESSCCCSCCCCSSCEECCSSSSCCSSCCBCEECCSSCEEECSSSBCCSS-SCCC-S-CC
T ss_pred ceEEECCCCCccccCCCCCeeccCcCcCCCCCCCCEEecCCCceecCCeEEEEeCCCCeeCCCCceEECC-CccC-C-CC
Confidence 46786 5 8998877 5678999999999999855567999999999999999999999999997 9999 7 89
Q ss_pred eEee
Q psy6641 75 FCVR 78 (87)
Q Consensus 75 ~C~~ 78 (87)
.|++
T Consensus 181 ~C~~ 184 (244)
T 1rid_A 181 TCQI 184 (244)
T ss_dssp EEES
T ss_pred eeee
Confidence 9975
No 31
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.63 E-value=5.2e-17 Score=92.06 Aligned_cols=70 Identities=19% Similarity=0.360 Sum_probs=55.9
Q ss_pred eeEEc-ceecCCCC-CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEc-CCCceeeCCCCccCCCCCCeEe
Q psy6641 3 NMKCH-NLVLPEVS-EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELL-GPSRRVCDKTGQWMPEGIPFCV 77 (87)
Q Consensus 3 ~~~C~-g~W~~~~~-~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~-G~~~~~C~~~g~Ws~~~~p~C~ 77 (87)
.++|+ +.|++.++ ..+.|+ +.+.||.+......|.+|++|+|+|++||.|. |+..++|+++| |+ + +|.|+
T Consensus 53 ~~~C~~~gWs~~P~C~~~~c~--P~i~nG~~~~~~~~y~~g~~v~y~C~~Gy~l~~g~~~~~C~~~g-Ws-~-~P~Cv 125 (125)
T 4ayi_A 53 HIHCTQDGWSPAVPCLRKCYF--PYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WS-P-TPRCI 125 (125)
T ss_dssp EEEEETTEEESSSCCEEEEEC--CCCTTBCCTTTTCEEETTCEEECCBCTTCCCGGGCCEEEEETTE-EE-S-CCCCC
T ss_pred EEEeCCCcccCCCCCcCcCCC--CCCCCCEEeCCCCcccCCCEEEEEcCCCCEeCCCCceEEECCCc-cc-C-cCEeC
Confidence 47899 77997654 345553 35779988766677889999999999999997 89999998777 98 4 79884
No 32
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.62 E-value=1.2e-15 Score=87.32 Aligned_cols=61 Identities=30% Similarity=0.682 Sum_probs=55.1
Q ss_pred CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCc---cCCCCCCeEee
Q psy6641 16 EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQ---WMPEGIPFCVR 78 (87)
Q Consensus 16 ~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~---Ws~~~~p~C~~ 78 (87)
+.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+|+ |+.. .|.|++
T Consensus 3 ~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~-~P~C~~ 66 (136)
T 1gkg_A 3 EAKSCKTPPDPVNGMVHVI-TDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK-PPICQR 66 (136)
T ss_dssp SCCBCCCCCCCSSCEEECC-SCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSC-CCCEEE
T ss_pred ccCCCcCCCCCCCCEEECC-CCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCC-CCCEEe
Confidence 3578999999999999753 56889999999999999999999999999999 9997 999997
No 33
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=99.62 E-value=1e-15 Score=100.36 Aligned_cols=75 Identities=23% Similarity=0.536 Sum_probs=66.8
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |.|+...+ +.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.
T Consensus 142 ~~tC~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~Gs~v~y~C~~GY~L~G~~~~~C~~~G~~~~Ws~~-~P~ 219 (381)
T 3iyp_F 142 KLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDP-LPE 219 (381)
T ss_dssp EEEBCTTSCBCCCCCSEEECBCCCCCCCTTEEEECS-SCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSC-CCE
T ss_pred eEEecCCCcCcccCceeccccCCCCCccCCCceecC-CCcCcCCEEEEEeCCCcccCCccceEEecCCCcceEcCC-CCe
Confidence 57997 89998887 4678999999999999865 4578899999999999999999999999888 89997 999
Q ss_pred Eeec
Q psy6641 76 CVRW 79 (87)
Q Consensus 76 C~~~ 79 (87)
|++.
T Consensus 220 C~~v 223 (381)
T 3iyp_F 220 CREI 223 (381)
T ss_dssp EEEC
T ss_pred eeee
Confidence 9974
No 34
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=99.62 E-value=1.2e-15 Score=97.67 Aligned_cols=74 Identities=23% Similarity=0.587 Sum_probs=65.1
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~ 75 (87)
.++|+ |.|+...| +.+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.
T Consensus 45 ~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~-~P~ 122 (320)
T 1ntj_A 45 SITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAE-API 122 (320)
T ss_pred eEEECCCCEECCCCCccccccCcCCCCCCCCEEECC-CCcccCCEEEEEcCCCCEECCCCceEEEeCCCCeeeCCC-CCc
Confidence 57998 89997766 5679999999999998764 4578999999999999999999999999887 89997 899
Q ss_pred Eee
Q psy6641 76 CVR 78 (87)
Q Consensus 76 C~~ 78 (87)
|++
T Consensus 123 C~~ 125 (320)
T 1ntj_A 123 CES 125 (320)
T ss_pred CcC
Confidence 986
No 35
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.62 E-value=8.5e-16 Score=87.22 Aligned_cols=61 Identities=28% Similarity=0.648 Sum_probs=53.8
Q ss_pred cccCCCCCCCCCeEEEe-cCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEeecc
Q psy6641 17 YEECRFPGAPAHSSIVF-SNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVRWC 80 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~-~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~~ 80 (87)
.+.|+.|+.+.||.+.. ....|.+|++|+|+|++||.|.|+..++|+ +|+|+ . .|.|++.|
T Consensus 4 ~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~-~p~C~~~C 65 (129)
T 3r62_A 4 FGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-E-PPKCLHPC 65 (129)
T ss_dssp -CCBCSCCCBTTEEESSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-C-CCEEECCE
T ss_pred cccCcCCCCCCCCEEecCCCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-C-CCCccCcC
Confidence 56899999999999976 346799999999999999999999999999 99999 6 89998743
No 36
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=99.61 E-value=4.5e-16 Score=96.58 Aligned_cols=73 Identities=25% Similarity=0.520 Sum_probs=64.7
Q ss_pred eeeEEc-ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCC----CccCCCCCC
Q psy6641 2 VNMKCH-NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKT----GQWMPEGIP 74 (87)
Q Consensus 2 ~~~~C~-g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~----g~Ws~~~~p 74 (87)
..++|. |.|++. | +.+.|+.|+.+.||.+.. ..|.+|++|+|+|++||.|.|+..++|+.+ |+|+.. .|
T Consensus 47 ~~~~C~~g~Ws~~-p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~-~p 122 (244)
T 1rid_A 47 IYAKCTGTGWTLF-NQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPE-AP 122 (244)
T ss_dssp SSEEEETTEEESC-CCEECCCCCCCCCCSSCBCCC--CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSC-SC
T ss_pred CeEEcCCCcCCCC-CeeeeCCCcCCCCCCCCEEeC--CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCC-CC
Confidence 358999 999977 5 467899999999999876 678899999999999999999999999876 799997 89
Q ss_pred eEee
Q psy6641 75 FCVR 78 (87)
Q Consensus 75 ~C~~ 78 (87)
.|++
T Consensus 123 ~C~~ 126 (244)
T 1rid_A 123 ICES 126 (244)
T ss_dssp CEES
T ss_pred eecc
Confidence 9987
No 37
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.61 E-value=2.7e-15 Score=97.40 Aligned_cols=76 Identities=25% Similarity=0.494 Sum_probs=63.7
Q ss_pred eeEEc------ceecCCCC--Cc----ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCC
Q psy6641 3 NMKCH------NLVLPEVS--EY----EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 3 ~~~C~------g~W~~~~~--~~----~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~ 70 (87)
.++|+ |+|+...| +. +.|+.|..+.++.+.. ...|.+|++|+|.|++||.|.|+..++|+.+|+|++
T Consensus 43 ~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~ 121 (376)
T 2aty_A 43 SLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRG-STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGP 121 (376)
T ss_pred ceEEeccCCCCCeECCCCCccccccCccEeCCCcCCCCeEecC-CCCccCCCEEEEECCCCCEECCCcCeEECCCCEECC
Confidence 46883 89998877 33 6899988776666654 356889999999999999999999999999999997
Q ss_pred -CCCCeEeecc
Q psy6641 71 -EGIPFCVRWC 80 (87)
Q Consensus 71 -~~~p~C~~~~ 80 (87)
. .|.|++.+
T Consensus 122 ~~-~p~C~~~~ 131 (376)
T 2aty_A 122 TR-LPTCVSVF 131 (376)
T ss_pred CC-CCEeEccC
Confidence 7 89999764
No 38
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=99.61 E-value=1.2e-15 Score=96.79 Aligned_cols=75 Identities=25% Similarity=0.526 Sum_probs=65.9
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCC------CEEcCCCceeeCCC---
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERG------FELLGPSRRVCDKT--- 65 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--- 65 (87)
.++|+ | .|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++| |.|.|+..++|+.+
T Consensus 137 ~~~C~~~g~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~ 216 (290)
T 2xrb_A 137 SAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQ 216 (290)
T ss_dssp EEEEEEETTEEEESSCCCEEEECEECCCCCBTTEEEECSSTTCEETTCEEEEEECBCTTSCBCEEEESCSEEEEEESSSS
T ss_pred ceEEEeCCCCceeCCCCCeeccccCCCCCCCCCCeEecCCCCccccCCEEEEEeCCCCCCcceEEecCCceeEecCCCCC
Confidence 57898 5 7998888 5678999999999998764 35788999999999999 99999999999977
Q ss_pred -CccCCCCCCeEee
Q psy6641 66 -GQWMPEGIPFCVR 78 (87)
Q Consensus 66 -g~Ws~~~~p~C~~ 78 (87)
|+|+.+ .|.|++
T Consensus 217 ~G~Ws~~-~P~C~~ 229 (290)
T 2xrb_A 217 VGVWSGP-PPQCIE 229 (290)
T ss_dssp SEEESSC-CCEEEE
T ss_pred CCeECCC-CCcccc
Confidence 999997 999986
No 39
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.61 E-value=8.5e-16 Score=87.19 Aligned_cols=60 Identities=18% Similarity=0.362 Sum_probs=54.3
Q ss_pred cccCCCCCCCCCeEEEecC--CCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEee
Q psy6641 17 YEECRFPGAPAHSSIVFSN--ETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~--~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
.+.|+.|+.+.||.+.... ..|.+|++|+|+|++|| |.|+..++|+.+|+|+.. .|.|++
T Consensus 3 ~~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~-~p~C~~ 64 (128)
T 1gkn_A 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSP-KDVCKR 64 (128)
T ss_dssp CCEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCC-CSCCEE
T ss_pred CccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCC-CCeEcc
Confidence 3679999999999997653 57899999999999999 999999999999999987 899986
No 40
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.60 E-value=2.3e-15 Score=85.00 Aligned_cols=59 Identities=25% Similarity=0.655 Sum_probs=53.5
Q ss_pred ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCCeEee
Q psy6641 18 EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.||.+... ..|.+|++|+|+|++||.|.|+..++|+.+| +|+.. .|.|++
T Consensus 1 k~C~~p~~~~nG~~~~~-~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~-~p~C~~ 62 (125)
T 1h03_P 1 KSCPNPGEIRNGQIDVP-GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDP-LPECRE 62 (125)
T ss_dssp CBCCCCCCCTTEEEECT-TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSC-CCEEEE
T ss_pred CcCcCCCCCCCCEEECC-CCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCC-CCcCCC
Confidence 36999999999999875 4578899999999999999999999999888 89997 999987
No 41
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.60 E-value=1.4e-16 Score=90.09 Aligned_cols=72 Identities=22% Similarity=0.510 Sum_probs=58.5
Q ss_pred eeeEEc-ceecCCCC-CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCc-eeeCCCCccCCCCCCeEee
Q psy6641 2 VNMKCH-NLVLPEVS-EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSR-RVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 2 ~~~~C~-g~W~~~~~-~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~-~~C~~~g~Ws~~~~p~C~~ 78 (87)
..++|+ +.|++. | ..+.|+. +.+.||.+......|.+|++|+|+|++||.|.|+.. ++|+.+| |+. +|.|++
T Consensus 50 ~~~~C~~~gWs~~-p~C~~~C~~-p~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~~C~~~g-Ws~--~P~C~~ 124 (124)
T 2yby_A 50 DYLRCTAQGWEPE-VPCVRKCVF-HYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSP--PPKCIR 124 (124)
T ss_dssp EEEEEETTEEESS-SCCEEEEEE-CCCBTBCCCSSCEEEETTCEEECCBCTTCCCSSSSCEEEEETTE-EES--CSBCC-
T ss_pred cEEEecCCCccCC-CceeeECcC-CCCCCCeEecccCcccCCCEEEEECCCCCEecCCCCeEEcCCCC-cCC--CCeecC
Confidence 468999 449986 6 3478987 567899886555678889999999999999999884 8999999 997 589863
No 42
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.58 E-value=6.3e-15 Score=102.15 Aligned_cols=75 Identities=28% Similarity=0.528 Sum_probs=64.7
Q ss_pred eeEEc--ceecCCCC--Cc--ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 3 NMKCH--NLVLPEVS--EY--EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~--~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
.++|+ |+|++..| +. +.|+.|+.+.++.... ..|.+|++|+|+|++||.|.|+..++|+.+|+|+++ .|.|
T Consensus 117 ~~~C~~~g~Ws~~~p~C~~~~~~C~~p~~~~~~~~~~--~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~g~Ws~~-~p~C 193 (741)
T 3hrz_D 117 NRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVG--SQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGT-EPSC 193 (741)
T ss_dssp EEEBCTTSCBSSCCCEEECSCSSSCCCCCCTTEEEEC--CCCSTTCEEEEEECTTSEEESCSEEEBCTTSSBSSC-CCEE
T ss_pred ceEecCCCeEccCcCeeeccCCcCCCCCCCCCCeeeC--CccccCCEEEEEcCCCCEEcCCCeEEECCCCEEeCC-Cccc
Confidence 57997 99998888 22 6899998887776643 468899999999999999999999999999999997 9999
Q ss_pred eecc
Q psy6641 77 VRWC 80 (87)
Q Consensus 77 ~~~~ 80 (87)
++..
T Consensus 194 ~~~~ 197 (741)
T 3hrz_D 194 QDSF 197 (741)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 9854
No 43
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.58 E-value=4.7e-15 Score=86.84 Aligned_cols=60 Identities=20% Similarity=0.472 Sum_probs=52.5
Q ss_pred ccCCCCCCCCCeEEE-ecCCCcCCCCEEEEEcCCCCEEcC------CCceeeCCCCccCCCCCCeEee
Q psy6641 18 EECRFPGAPAHSSIV-FSNETLSPGTVATYACERGFELLG------PSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~-~~~~~~~~g~~~~~~C~~gy~l~G------~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.||.+. ..+..|.+|++|+|+|++||.|.| +..++|+.+|+|+.. .|.|++
T Consensus 3 ~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~-~p~C~~ 69 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRA-MPRCKI 69 (159)
T ss_dssp CBCCCCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSC-CCEEEE
T ss_pred ccCcCCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCC-CCcccc
Confidence 679999999999654 344679999999999999999997 478999999999997 999985
No 44
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=99.58 E-value=5.1e-15 Score=94.75 Aligned_cols=75 Identities=25% Similarity=0.526 Sum_probs=65.2
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCC------CEEcCCCceeeCCC---
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERG------FELLGPSRRVCDKT--- 65 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--- 65 (87)
.++|+ | .|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++| |.|.|+..++|+.+
T Consensus 104 ~~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~ 183 (320)
T 1ntj_A 104 SAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQ 183 (320)
T ss_pred ceEEEeCCCCeeeCCCCCcCcCCCCCCCCCCCCCcEecCCCCccccCCEEEEECCCCCCCcceEEEeCCCceEEecCCCC
Confidence 57898 5 7998777 5678999999999988653 35788999999999999 99999999999987
Q ss_pred -CccCCCCCCeEee
Q psy6641 66 -GQWMPEGIPFCVR 78 (87)
Q Consensus 66 -g~Ws~~~~p~C~~ 78 (87)
|+|+.+ .|.|++
T Consensus 184 ~G~Ws~~-~P~C~~ 196 (320)
T 1ntj_A 184 VGVWSGP-PPQCIE 196 (320)
T ss_pred CCEECCC-Cccccc
Confidence 999997 899986
No 45
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.57 E-value=7.5e-15 Score=99.44 Aligned_cols=76 Identities=28% Similarity=0.496 Sum_probs=65.9
Q ss_pred eeEEc--ceecCCCC--Ccc-cCCCCCCCCCeEEE-ecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 3 NMKCH--NLVLPEVS--EYE-ECRFPGAPAHSSIV-FSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~-~C~~p~~~~~g~~~-~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
.++|+ |+|++..| ..+ .|+.|+.+.||.+. .....|.+|++|+|.|++||.|.|+..++|+.+|+|+.. .|.|
T Consensus 238 ~~~C~~~g~Ws~~~P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~W~~~-~p~C 316 (551)
T 1ntl_A 238 SVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPL-LAKC 316 (551)
T ss_pred CeEECCCCeECCCCccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCcEecCCcceEEeCCCeECCC-CCee
Confidence 57898 89998877 344 79999999999886 334568999999999999999999999999999999987 8999
Q ss_pred eec
Q psy6641 77 VRW 79 (87)
Q Consensus 77 ~~~ 79 (87)
...
T Consensus 317 ~~~ 319 (551)
T 1ntl_A 317 VSR 319 (551)
T ss_pred eee
Confidence 864
No 46
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.56 E-value=3.8e-15 Score=105.95 Aligned_cols=75 Identities=23% Similarity=0.310 Sum_probs=59.1
Q ss_pred eeEEc--c----eecCCCC-CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCe
Q psy6641 3 NMKCH--N----LVLPEVS-EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g----~W~~~~~-~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~ 75 (87)
.++|+ | .|+...| ....|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+++|+|+.+ .|.
T Consensus 599 ~~~C~~~g~~~~~Ws~~~P~C~~~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~-~P~ 677 (913)
T 3t5o_A 599 GQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQG-DVE 677 (913)
T ss_dssp --CCCCCCCC-----------CCCBCCCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESCCEEEECTTSCEECC-SCE
T ss_pred cceEeCCCCccccCCCCCCCCcCcCCCCCCCCCceEecCCCceecccEEEEEeCCCCEECCCCceEECCCCeEcCC-CCe
Confidence 46787 4 6998877 23389999999999998766789999999999999999999999999999999998 999
Q ss_pred Eee
Q psy6641 76 CVR 78 (87)
Q Consensus 76 C~~ 78 (87)
|++
T Consensus 678 C~~ 680 (913)
T 3t5o_A 678 CQR 680 (913)
T ss_dssp EEE
T ss_pred ecc
Confidence 987
No 47
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.56 E-value=7.3e-16 Score=92.37 Aligned_cols=71 Identities=24% Similarity=0.390 Sum_probs=58.9
Q ss_pred eeEEc-ceecCCCC--Ccc-cCCC-CCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCC---CceeeCCCCccCCCCCC
Q psy6641 3 NMKCH-NLVLPEVS--EYE-ECRF-PGAPAHSSIVFSNETLSPGTVATYACERGFELLGP---SRRVCDKTGQWMPEGIP 74 (87)
Q Consensus 3 ~~~C~-g~W~~~~~--~~~-~C~~-p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~---~~~~C~~~g~Ws~~~~p 74 (87)
.++|+ +.|++ .| +.+ .|+. |+.+.||.+......|.+|++|+|+|++||.|.|. ..++|+++| |++ .|
T Consensus 109 ~~~C~~~gWs~-~P~C~~v~~C~~~p~~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~g~~~s~~~~C~~~g-Ws~--~P 184 (187)
T 2uwn_A 109 TVTCMENGWSP-TPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG-WSA--QP 184 (187)
T ss_dssp EEEEETTEEES-CSCCEECCEEEGGGCCCSSEECCSCCSEEETTCEEEEEECTTCCCSSSCSEEEEEEETTE-ESC--CC
T ss_pred EEEecCCCcCC-CCceeecccCCCCCccccCceEcCCCccCcCCCEEEEECCCCCEecCCCCcCeEEECCCC-cCC--CC
Confidence 58999 33998 46 355 8998 58899998876556788899999999999999985 789999999 997 58
Q ss_pred eEe
Q psy6641 75 FCV 77 (87)
Q Consensus 75 ~C~ 77 (87)
.|+
T Consensus 185 ~Ci 187 (187)
T 2uwn_A 185 TCI 187 (187)
T ss_dssp CCC
T ss_pred ccC
Confidence 884
No 48
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.56 E-value=9.2e-15 Score=95.86 Aligned_cols=70 Identities=24% Similarity=0.442 Sum_probs=56.5
Q ss_pred ceecCCCC-CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEE------cCCCceeeCCCCccCCCCCCeEee
Q psy6641 8 NLVLPEVS-EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFEL------LGPSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 8 g~W~~~~~-~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l------~G~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
..|+.... +.+.|+.|+.+.||.+......|.+|++|+|+|++||.| .|+..++|+.+|+|+.+ .|.|++
T Consensus 4 ~gw~~~~~c~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~-~p~C~~ 80 (403)
T 1zjk_A 4 TGWKIHYTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRP-MPACSI 80 (403)
T ss_dssp ---------CCCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSC-CCEEEE
T ss_pred CceEEEEEECCccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCC-CCCccc
Confidence 46775554 678999999999999987777899999999999999999 46678999999999997 999997
No 49
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.55 E-value=9e-15 Score=94.93 Aligned_cols=60 Identities=27% Similarity=0.568 Sum_probs=55.8
Q ss_pred ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeC----CCCccCCCCCCeEee
Q psy6641 18 EECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCD----KTGQWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~----~~g~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+ .+|+|+.+ .|.|++
T Consensus 2 i~C~~p~~~~nG~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~-~P~C~~ 65 (376)
T 2aty_A 2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKP-APKCEY 65 (376)
T ss_pred CCCcCCCCCCCCEEeccCCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCC-CCcccc
Confidence 6899999999999987667799999999999999999999999999 79999997 899986
No 50
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.55 E-value=1.6e-15 Score=86.07 Aligned_cols=71 Identities=23% Similarity=0.509 Sum_probs=56.1
Q ss_pred eeEEc-ceecCCCC-CcccCCCCCCCCCe-EEEe----cCCCc-CCCCEEEEEcCCCCEEcCCC---ceeeCCCCccCCC
Q psy6641 3 NMKCH-NLVLPEVS-EYEECRFPGAPAHS-SIVF----SNETL-SPGTVATYACERGFELLGPS---RRVCDKTGQWMPE 71 (87)
Q Consensus 3 ~~~C~-g~W~~~~~-~~~~C~~p~~~~~g-~~~~----~~~~~-~~g~~~~~~C~~gy~l~G~~---~~~C~~~g~Ws~~ 71 (87)
.++|+ |+|+ ..| ....|+.|+.+.|| .+.. ....| .+|++|+|.|++||.|.|+. .++|+ +|+| .
T Consensus 47 ~~~C~~g~Ws-~~p~C~~~C~~p~~~~~g~~i~~~~~~~~~~y~~~g~~v~f~C~~Gy~l~G~~~~~~~~C~-~G~W--~ 122 (129)
T 3r62_A 47 RITCRNGQWS-EPPKCLHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--E 122 (129)
T ss_dssp EEEEETTEEC-CCCEEECCEECCHHHHHHHTEEETTTTTCCSEECTTCEEEEEECTTEEECTTSCCSEEECB-TTBC--C
T ss_pred eeEcCCCcCC-CCCCccCcCCCChhhhcccceeeeecccccccccCCCEEEEEeCCCccccCCCCcceEEeC-CCcC--C
Confidence 57899 9999 566 23389988777777 3322 23455 68999999999999999988 89998 8999 4
Q ss_pred CCCeEee
Q psy6641 72 GIPFCVR 78 (87)
Q Consensus 72 ~~p~C~~ 78 (87)
.|.|++
T Consensus 123 -~P~C~~ 128 (129)
T 3r62_A 123 -YPTCAK 128 (129)
T ss_dssp -CCCEEE
T ss_pred -Cceeee
Confidence 799986
No 51
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=99.54 E-value=2.2e-14 Score=104.33 Aligned_cols=75 Identities=25% Similarity=0.533 Sum_probs=66.0
Q ss_pred eEEc-ceecCCCC--CcccCCCCCCCCCeEEEec----CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 4 MKCH-NLVLPEVS--EYEECRFPGAPAHSSIVFS----NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 4 ~~C~-g~W~~~~~--~~~~C~~p~~~~~g~~~~~----~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
++|+ +.|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+++|+|+.+ .|.|
T Consensus 109 ~~C~~~gWs~~~P~C~~i~C~~~~~p~nG~~~~~~~~~~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~G~Ws~~-~P~C 187 (1213)
T 1haq_A 109 RECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKE-KPKC 187 (1213)
T ss_pred eEECCCCccCCCCCeeccccCCCCCCCCCeEeccccccCCccccCCEEEEEcCCCCEEcCCCceEECCCCcCCCC-CCEE
Confidence 6899 44999888 5789999999999998642 2568899999999999999999999999999999997 9999
Q ss_pred eec
Q psy6641 77 VRW 79 (87)
Q Consensus 77 ~~~ 79 (87)
++.
T Consensus 188 ~~v 190 (1213)
T 1haq_A 188 VEI 190 (1213)
T ss_pred Eec
Confidence 864
No 52
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.53 E-value=3.1e-15 Score=89.60 Aligned_cols=73 Identities=25% Similarity=0.549 Sum_probs=60.9
Q ss_pred eeEEc-ceecCCCCCcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEc-CCCceeeCCCCccCCCCCCeEeec
Q psy6641 3 NMKCH-NLVLPEVSEYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELL-GPSRRVCDKTGQWMPEGIPFCVRW 79 (87)
Q Consensus 3 ~~~C~-g~W~~~~~~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~-G~~~~~C~~~g~Ws~~~~p~C~~~ 79 (87)
.++|+ +.|++..+....|+.| .+.||.+......|.+|++|+|+|++||.|. |+..++|+.+| |++ .|.|++.
T Consensus 52 ~~~C~~~gWs~~~~C~~~C~~p-~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~--~P~C~~v 126 (187)
T 2uwn_A 52 HIHCTQDGWSPAVPCLRKCYFP-YLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP--TPRCIRV 126 (187)
T ss_dssp EEEEETTEEESSSCCEEEEECC-CCTTEECSCTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES--CSCCEEC
T ss_pred EEEeCCCCCCCCCCcCCcCcCC-CCCccEEcCCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC--CCceeec
Confidence 68999 4499877743489875 6789998665567889999999999999997 99999999999 996 5999863
No 53
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.53 E-value=2.6e-14 Score=85.53 Aligned_cols=60 Identities=23% Similarity=0.498 Sum_probs=53.5
Q ss_pred cccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEeec
Q psy6641 17 YEECRFPGAPAHSSIVFS-NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCVRW 79 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~ 79 (87)
.+.|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+ +|+|+. .|.|++.
T Consensus 2 ~v~C~~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~--~p~C~~~ 62 (188)
T 3sw0_X 2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTE--PPQCKDS 62 (188)
T ss_dssp CCCBCSCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC--CCEEECT
T ss_pred cCcCcCCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCCEEEeC-CCEeCC--CCccCcC
Confidence 468999999999998764 46789999999999999999999999998 999994 6999974
No 54
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=99.52 E-value=4.8e-14 Score=100.46 Aligned_cols=76 Identities=26% Similarity=0.617 Sum_probs=66.0
Q ss_pred eeEEc--ceecCCCC--C---cccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCC
Q psy6641 3 NMKCH--NLVLPEVS--E---YEECRFPGAPAHSSIVFS-NETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIP 74 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~---~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p 74 (87)
.++|+ |+|++..| + .+.|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+.+|+|+.+ .|
T Consensus 807 ~~~C~~~g~Ws~~~P~C~~~~~~~C~~pp~~~ng~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~Ws~~-~p 885 (951)
T 2gsx_A 807 VIRCHTDNTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGGNIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQP-AP 885 (951)
T ss_pred eeEEccCCeECCCCceeecccccCCCCCCcCCcceeeCCccccccCCCEEEEEcCCCCEECCCCeeEECCCCEECCC-Cc
Confidence 57898 99998877 2 257999999999988653 3568899999999999999999999999999999998 89
Q ss_pred eEeec
Q psy6641 75 FCVRW 79 (87)
Q Consensus 75 ~C~~~ 79 (87)
.|++.
T Consensus 886 ~C~~~ 890 (951)
T 2gsx_A 886 HCKEV 890 (951)
T ss_pred eeeee
Confidence 99864
No 55
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=99.51 E-value=4.1e-14 Score=95.84 Aligned_cols=75 Identities=27% Similarity=0.552 Sum_probs=65.5
Q ss_pred eeEEc--c---eecCCCC--CcccCCCCCCCCCeEEEec-CCCcCCCCEEEEEcCCC------CEEcCCCceeeCCC---
Q psy6641 3 NMKCH--N---LVLPEVS--EYEECRFPGAPAHSSIVFS-NETLSPGTVATYACERG------FELLGPSRRVCDKT--- 65 (87)
Q Consensus 3 ~~~C~--g---~W~~~~~--~~~~C~~p~~~~~g~~~~~-~~~~~~g~~~~~~C~~g------y~l~G~~~~~C~~~--- 65 (87)
.++|+ | .|+...| +.+.|+.|+.+.||.+... ...|.+|++|+|+|++| |.|.|+..++|+.+
T Consensus 102 ~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~ 181 (551)
T 1ntl_A 102 SAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDGE 181 (551)
T ss_pred cEEEEeCCCcceeCCCCCCCCCCCCCCCCcCCCCcEecCCCCccccCCEEEEEeCCCCCccceeEecCCcceEeeCCCCc
Confidence 57898 5 7998777 5678999999999988764 35788999999999999 99999999999987
Q ss_pred -CccCCCCCCeEee
Q psy6641 66 -GQWMPEGIPFCVR 78 (87)
Q Consensus 66 -g~Ws~~~~p~C~~ 78 (87)
|+|+.+ .|.|++
T Consensus 182 ~G~Ws~~-~P~C~~ 194 (551)
T 1ntl_A 182 IGVWSGP-PPQCIE 194 (551)
T ss_pred CCEECCC-CCcccC
Confidence 999997 999985
No 56
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.49 E-value=5.5e-15 Score=84.44 Aligned_cols=59 Identities=20% Similarity=0.515 Sum_probs=52.5
Q ss_pred ccCCCCCCCCCeEEEec---CCCcCCCCEEEEEcCCCC-EEcCCCceeeCCCCccCCCCCCeEee
Q psy6641 18 EECRFPGAPAHSSIVFS---NETLSPGTVATYACERGF-ELLGPSRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~---~~~~~~g~~~~~~C~~gy-~l~G~~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.||.+... ...|.+|++|+|+|++|| .|.|+..++|+.+|+|+. .|.|++
T Consensus 1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~--~p~C~~ 63 (133)
T 2a55_A 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY--NTFCIY 63 (133)
T ss_dssp CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC--CCCSEE
T ss_pred CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC--CCcCcc
Confidence 47999999999998763 467899999999999999 788999999999999997 699985
No 57
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=99.47 E-value=1.1e-13 Score=98.68 Aligned_cols=74 Identities=28% Similarity=0.538 Sum_probs=66.4
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecC-CCcCCCCEEEEEcCCC------CEEcCCCceeeC----CCCc
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSN-ETLSPGTVATYACERG------FELLGPSRRVCD----KTGQ 67 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~-~~~~~g~~~~~~C~~g------y~l~G~~~~~C~----~~g~ 67 (87)
.++|+ +.|+...| +.+.|+.|+.+.||.+.... ..|.+|++|+|+|++| |.|.|+..++|+ .+|+
T Consensus 486 ~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G~~~~~C~~~~~~~G~ 565 (951)
T 2gsx_A 486 YQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGT 565 (951)
T ss_pred eeEccCcccccCCCceecceeCCCCCCCCCCeEeCCCCCccccCCEEEEEcCCCCCCCceEEEecCceEEecccCCCCcc
Confidence 46888 89998888 57899999999999998654 4599999999999999 999999999999 8999
Q ss_pred cCCCCCCeEe
Q psy6641 68 WMPEGIPFCV 77 (87)
Q Consensus 68 Ws~~~~p~C~ 77 (87)
|+.+ .|.|+
T Consensus 566 Ws~~-~P~C~ 574 (951)
T 2gsx_A 566 WSGP-APLCK 574 (951)
T ss_pred CcCC-Cceee
Confidence 9997 99996
No 58
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=99.44 E-value=2.2e-13 Score=99.17 Aligned_cols=73 Identities=21% Similarity=0.454 Sum_probs=65.4
Q ss_pred eeEEc-ceecCCCC----CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEe
Q psy6641 3 NMKCH-NLVLPEVS----EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCV 77 (87)
Q Consensus 3 ~~~C~-g~W~~~~~----~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~ 77 (87)
.++|+ |.|+. .| +.+.|+.|+.+.||.+......|.+|++|+|+|+.||.|.|+..++| .+|+|+ + .|.|+
T Consensus 652 ~~~C~~G~Ws~-~P~C~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C-~~G~Ws-~-~p~C~ 727 (1213)
T 1haq_A 652 KIQCVDGEWTT-LPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSITC-IHGVWT-Q-LPQCV 727 (1213)
T ss_pred eEEeCCCeeCC-CcccccccCcCCCCCcCCCCeeccCCCcccCCCEEEEEeCCCceeCCCCeEEC-CCCCcc-C-ccccc
Confidence 57999 99998 66 24689999999999998776789999999999999999999999999 899999 6 89998
Q ss_pred ec
Q psy6641 78 RW 79 (87)
Q Consensus 78 ~~ 79 (87)
+.
T Consensus 728 ~~ 729 (1213)
T 1haq_A 728 AI 729 (1213)
T ss_pred cc
Confidence 65
No 59
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.44 E-value=4.9e-13 Score=87.67 Aligned_cols=77 Identities=19% Similarity=0.473 Sum_probs=64.3
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCCC-EEcCC-CceeeCCCCccCC----
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFS--NETLSPGTVATYACERGF-ELLGP-SRRVCDKTGQWMP---- 70 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy-~l~G~-~~~~C~~~g~Ws~---- 70 (87)
.++|+ |+|+...| +.+.|+.|+.+.||.+... ...+.+|++|+|+|++|| .|.|. ..++|..+|.|+.
T Consensus 62 ~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~C~~gyy~l~~~~~~~~C~~~g~W~~~~~~ 141 (403)
T 1zjk_A 62 TAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGE 141 (403)
T ss_dssp EEEBCSSSSBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEESSCSEEEECTTSCEEETTCC
T ss_pred eeEcCCCCEeCCCCCCcccccCCCCCCcCCccEEEccCCCCCccCCeEEEeCCCchhheecCCCCEEECCCcccccccCC
Confidence 58999 99998888 5678999999999998753 356888999999999996 67776 7899999999986
Q ss_pred -CCCCeEeecc
Q psy6641 71 -EGIPFCVRWC 80 (87)
Q Consensus 71 -~~~p~C~~~~ 80 (87)
. .|.|.+.|
T Consensus 142 ~~-~p~C~~~C 151 (403)
T 1zjk_A 142 KS-LPVCEPVC 151 (403)
T ss_dssp CS-CCEEEECC
T ss_pred cc-CCCCCCCC
Confidence 4 78887654
No 60
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=99.43 E-value=3.6e-13 Score=101.22 Aligned_cols=74 Identities=34% Similarity=0.701 Sum_probs=65.3
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecC-CCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeEe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSN-ETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFCV 77 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~-~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~ 77 (87)
.++|+ |+|++..| +.+ |+.|+.+.||.+.... ..|.+|++|+|+|++||.|.|+..++|+.+|+|+.. .|.|+
T Consensus 1136 ~~~C~~~g~Ws~~~P~C~~~-C~~p~~~~~g~~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~-~P~C~ 1213 (1931)
T 2q7z_A 1136 RVKCQALNKWEPELPSCSRV-CQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPE-APRCA 1213 (1931)
T ss_pred eeEECCCCeECCCCCccccc-cCCCCccccCcccccCCcccCCCCEEEEECCCCCEeCCCceeEEcCCCeECCC-Cceee
Confidence 57899 99998887 344 9999999999886543 578899999999999999999999999999999987 99998
Q ss_pred e
Q psy6641 78 R 78 (87)
Q Consensus 78 ~ 78 (87)
+
T Consensus 1214 ~ 1214 (1931)
T 2q7z_A 1214 V 1214 (1931)
T ss_pred e
Confidence 5
No 61
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.42 E-value=3.8e-13 Score=87.97 Aligned_cols=60 Identities=22% Similarity=0.468 Sum_probs=50.8
Q ss_pred ccCCCCCCCCC-eEEEecCCCcCCCCEEEEEcCCCCEEc-CC-----CceeeCCCCccCCCCCCeEee
Q psy6641 18 EECRFPGAPAH-SSIVFSNETLSPGTVATYACERGFELL-GP-----SRRVCDKTGQWMPEGIPFCVR 78 (87)
Q Consensus 18 ~~C~~p~~~~~-g~~~~~~~~~~~g~~~~~~C~~gy~l~-G~-----~~~~C~~~g~Ws~~~~p~C~~ 78 (87)
+.|+.|+.+.| +.+...+..|.+|++|+|+|++||.|. |. ..++|+.+|+|+.. .|.|+.
T Consensus 1 i~C~~p~~~~n~~~~~~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~-~p~C~~ 67 (399)
T 1gpz_A 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRA-MPRCKI 67 (399)
T ss_dssp CCBCCCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSC-CCEEEE
T ss_pred CCCcCCCCCCCCCCcCCCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCc-CCceee
Confidence 47999999999 566666678999999999999999996 43 35679999999997 999984
No 62
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.41 E-value=7.6e-14 Score=99.36 Aligned_cols=71 Identities=24% Similarity=0.431 Sum_probs=61.9
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCe
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTGQWMPEGIPF 75 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~ 75 (87)
.++|+ |+|+...| +.+.|+.|+.+.|+.+......|.+|++|+|.|++||.|.|+..++|+.+ +|+++ +|.
T Consensus 662 ~~~C~~~G~Ws~~~P~C~~v~C~~P~~~~~~~~~~~~~~y~~gs~v~y~C~~Gy~l~G~~~~~C~~~-~Ws~~-~P~ 736 (913)
T 3t5o_A 662 YFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVAGPSRYTCQGN-SWTPP-ISN 736 (913)
T ss_dssp EEEECTTSCEECCSCEEEECEEECCCCCSSSBCSSCCSEEETTCEEECBCCTTCEESSCSEEECBTT-BCSCC-CTT
T ss_pred ceEECCCCeEcCCCCeeccCcCCCCCCCCCcEecCCCCcccCCCEEEEEeCCCCEECCCCceEECCC-EeeCC-CCe
Confidence 57999 99998888 56789999888887775555678899999999999999999999999988 99987 765
No 63
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=99.40 E-value=7.5e-13 Score=99.51 Aligned_cols=75 Identities=25% Similarity=0.603 Sum_probs=66.2
Q ss_pred eeeEEc--ceecCCCC--CcccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCCceeeCCCC---ccCCCCCC
Q psy6641 2 VNMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPSRRVCDKTG---QWMPEGIP 74 (87)
Q Consensus 2 ~~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g---~Ws~~~~p 74 (87)
..++|+ |.|+...+ +.+.|+.|..+.||.+... ..|.+|+.|+|+|++||.|.|++.++|+.+| +|+.+ .|
T Consensus 41 ~~~~C~~~g~W~~~~~~c~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~~~C~~GY~L~G~~~~~C~~~g~~~~Ws~~-~P 118 (1931)
T 2q7z_A 41 FSIICLKNSVWTGAKDRCRRKSCRNPPDPVNGMVHVI-KGIQFGSQIKYSCTKGYRLIGSSSATCIISGDTVIWDNE-TP 118 (1931)
T ss_pred ceEEeCCCCccCCCCCcccCCCCcCCCCCCCCeEEec-CCeEeCCEEEEEECCCCEEcCCccceEecCCCccccCCC-CC
Confidence 358998 99997555 6789999999999999655 4588999999999999999999999999999 89998 99
Q ss_pred eEee
Q psy6641 75 FCVR 78 (87)
Q Consensus 75 ~C~~ 78 (87)
.|++
T Consensus 119 ~C~~ 122 (1931)
T 2q7z_A 119 ICDR 122 (1931)
T ss_pred Eeee
Confidence 9985
No 64
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.36 E-value=2.4e-13 Score=76.71 Aligned_cols=59 Identities=29% Similarity=0.653 Sum_probs=48.6
Q ss_pred ccCCCCCCCCCeEEEec---CCCc--CCCCEEEEEcCCCCEEcCC---CceeeCCCCccCCCCCCeEeecc
Q psy6641 18 EECRFPGAPAHSSIVFS---NETL--SPGTVATYACERGFELLGP---SRRVCDKTGQWMPEGIPFCVRWC 80 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~---~~~~--~~g~~~~~~C~~gy~l~G~---~~~~C~~~g~Ws~~~~p~C~~~~ 80 (87)
+.|+.| .+.||.+... +..| .+|++|+|+|++||.|.|. ..++|+.+| |+. .|.|+..|
T Consensus 3 ~~C~~P-~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~--~p~C~~~C 69 (124)
T 2yby_A 3 KPCEFP-QFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP--EVPCVRKC 69 (124)
T ss_dssp CCBCCC-CCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EES--SSCCEEEE
T ss_pred ccCCCC-cccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccC--CCceeeEC
Confidence 579886 8999998753 2234 7899999999999999998 789999999 997 48998443
No 65
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.31 E-value=2e-12 Score=78.86 Aligned_cols=59 Identities=24% Similarity=0.511 Sum_probs=48.9
Q ss_pred cCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCC--EEcCCCceeeCC-CC--ccCCCCCCeEeec
Q psy6641 19 ECRFPGAPAHSSIVFSNETLSPGTVATYACERGF--ELLGPSRRVCDK-TG--QWMPEGIPFCVRW 79 (87)
Q Consensus 19 ~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy--~l~G~~~~~C~~-~g--~Ws~~~~p~C~~~ 79 (87)
.|..|+.+.|+.+. ....|.+|++|+|.|++|| .|.|+..++|.. +| .|+.+ .|.|+..
T Consensus 103 ~C~~PP~i~n~~l~-~~~~y~~Gs~V~Y~C~eGY~~ll~G~~~~~C~~~~G~~~WS~p-~p~C~~~ 166 (217)
T 2b5i_D 103 HCREPPPWENEATE-RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQP-QLICTGE 166 (217)
T ss_dssp CBCCCCCCSSCCSS-CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEECCC-CEEEEC-
T ss_pred cCCCCCcccccccc-ccccccCCCEEEEECcCCchhcccCCcceEeecCCCccccCCC-CcceEec
Confidence 58888888998653 3467999999999999999 579999999964 45 89998 8999864
No 66
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.30 E-value=4.5e-12 Score=82.09 Aligned_cols=62 Identities=26% Similarity=0.469 Sum_probs=54.8
Q ss_pred cccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcCCC------ceeeCCCCccCCCCCCeEeec
Q psy6641 17 YEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELLGPS------RRVCDKTGQWMPEGIPFCVRW 79 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G~~------~~~C~~~g~Ws~~~~p~C~~~ 79 (87)
...|+.|..+.||.+......|.+|+.|+|+|++||+|.|.. .++|+.+|+|+.+ .|.|++.
T Consensus 279 ~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~-~P~C~~~ 346 (361)
T 4aqb_A 279 GNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNK-IPTCKKN 346 (361)
T ss_dssp CCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSC-CCEEEEC
T ss_pred cCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCC-CCeeeEE
Confidence 356999999999999887778999999999999999999875 3689999999998 9999863
No 67
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.20 E-value=7.9e-12 Score=70.58 Aligned_cols=59 Identities=27% Similarity=0.591 Sum_probs=44.8
Q ss_pred cccCCCCCCCCCeEEEecC-----CCcCCCCEEEEEcCCCCEEcCCCc---eeeCCCCccCCCCCCeEeec
Q psy6641 17 YEECRFPGAPAHSSIVFSN-----ETLSPGTVATYACERGFELLGPSR---RVCDKTGQWMPEGIPFCVRW 79 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~-----~~~~~g~~~~~~C~~gy~l~G~~~---~~C~~~g~Ws~~~~p~C~~~ 79 (87)
.+.|+.| .++||.+.... ..+.+|++|+|+|++||.|.|.+. ++|+.+| |++ .|.|.+.
T Consensus 4 ~k~C~~P-~i~nG~~~~~~~~~~~~p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~--~P~C~~~ 70 (125)
T 4ayi_A 4 LKPCDYP-DIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSP--AVPCLRK 70 (125)
T ss_dssp --CBCSC-CCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EES--SSCCEEE
T ss_pred CccCcCC-ccCCCEEeccccccccccccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-ccC--CCCCcCc
Confidence 4579876 57899986532 124679999999999999999753 7999887 995 5888864
No 68
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=99.17 E-value=6.2e-11 Score=61.44 Aligned_cols=60 Identities=22% Similarity=0.381 Sum_probs=49.6
Q ss_pred cccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEc--CCCceeeCCCC-----ccCCCCCCeEeec
Q psy6641 17 YEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELL--GPSRRVCDKTG-----QWMPEGIPFCVRW 79 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~--G~~~~~C~~~g-----~Ws~~~~p~C~~~ 79 (87)
.+.|+.|+..+|..+ ....|.+++.++|.|++||.-. ++..+.|..+| .|..+ ...|++.
T Consensus 8 ~~~C~~Pp~ve~a~~--r~~~y~v~s~vRYqC~~Gf~rr~g~s~lirC~~n~~~~~~~Wt~P-~L~CI~e 74 (78)
T 2psm_F 8 GTTCPPPVSIEHADI--RVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTP-SLKCIRD 74 (78)
T ss_dssp --CCCCCCCCTTEEC--CCSCCSTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCC-CCCEEEC
T ss_pred CCcCCCCCccccccc--ceeeeccCCEEEEecchhHHhhCCCCCceEEEcCCCcCcceecCC-CeEEecC
Confidence 578999999999977 4578999999999999999654 47899998775 59998 8899865
No 69
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.10 E-value=4.9e-10 Score=73.25 Aligned_cols=78 Identities=17% Similarity=0.424 Sum_probs=60.9
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCCC-EEcC--------CCceeeCCCCc
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIVFS--NETLSPGTVATYACERGF-ELLG--------PSRRVCDKTGQ 67 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy-~l~G--------~~~~~C~~~g~ 67 (87)
.++|+ |+|++..| +.+.|+.|+.+.||.+... ...+.+++.++|.|++|| .+.+ ....+|..+|.
T Consensus 49 ~~~C~~~g~W~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~ 128 (399)
T 1gpz_A 49 TAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGI 128 (399)
T ss_dssp EEEBCTTSCBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSS
T ss_pred eEecCCCCcccCcCCceeeeeCCCCCCCCCcceEeecCCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCce
Confidence 46798 99998888 4578999999999988653 356778999999999999 4433 46689999999
Q ss_pred cCCC----CCCeEeecc
Q psy6641 68 WMPE----GIPFCVRWC 80 (87)
Q Consensus 68 Ws~~----~~p~C~~~~ 80 (87)
|... ..|.|.+.|
T Consensus 129 w~~~~~~~~~p~C~~~C 145 (399)
T 1gpz_A 129 WKNEQKGEKIPRCLPVC 145 (399)
T ss_dssp EEESSSCSSCCEEEECC
T ss_pred EeccccccccCCccCCC
Confidence 9752 157887644
No 70
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=98.81 E-value=7.5e-09 Score=56.10 Aligned_cols=59 Identities=25% Similarity=0.447 Sum_probs=48.9
Q ss_pred cccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCE-EcC-CCceeeCCC-----CccCCCCCCeEee
Q psy6641 17 YEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFE-LLG-PSRRVCDKT-----GQWMPEGIPFCVR 78 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~-l~G-~~~~~C~~~-----g~Ws~~~~p~C~~ 78 (87)
.+.|+.|+..+|..+ ....|.+|+.++|.|+.||. +.| ++.+.|..+ ..|..+ ...|+.
T Consensus 5 ~~~C~~Pp~~EHad~--rv~~y~v~s~vRYqC~~Gykrkagtsali~Ck~~~~~g~~~WT~P-~LkCI~ 70 (107)
T 2z3q_B 5 SITCPPPMSVEHADI--WVKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTP-SLKCIR 70 (107)
T ss_dssp CCBCCCCCCCTTEEC--CCSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCC-CCCEEE
T ss_pred CccCCCCCCcccccc--eeEEeccCCEEEEecchhhhhhcCCCCccEEEecccCCcceecCC-CeEEec
Confidence 468999999999887 34679999999999999995 454 788999744 579998 899994
No 71
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=98.76 E-value=2e-08 Score=64.44 Aligned_cols=61 Identities=26% Similarity=0.603 Sum_probs=48.9
Q ss_pred ccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCC-EEcCC--CceeeCCCCccCC-----CCCCeEeecc
Q psy6641 18 EECRFPGAPAHSSIVFSNETLSPGTVATYACERGF-ELLGP--SRRVCDKTGQWMP-----EGIPFCVRWC 80 (87)
Q Consensus 18 ~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy-~l~G~--~~~~C~~~g~Ws~-----~~~p~C~~~~ 80 (87)
++|+.|+.+.||.+... ....+++.++|.|.++| .|.+. ...+|..+|.|.. . .|.|.+.|
T Consensus 2 v~C~~p~~~~~g~~~~~-~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~-~~~c~~~C 70 (333)
T 1elv_A 2 LDCGIPESIENGKVEDP-ESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPE-LPKCVPVC 70 (333)
T ss_dssp CBCCSCCCCTTEEECCC-SCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTS-CCCEEECC
T ss_pred CCCCCCCcccCCceecC-CCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccc-cccccCCc
Confidence 68999999999998743 35667999999999996 66665 7899999999986 5 78898754
No 72
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=98.70 E-value=4.4e-08 Score=59.79 Aligned_cols=57 Identities=21% Similarity=0.426 Sum_probs=44.1
Q ss_pred cC-CCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEcC--CCceeeCCCC---ccCCCCCCeEeec
Q psy6641 19 EC-RFPGAPAHSSIVFSNETLSPGTVATYACERGFELLG--PSRRVCDKTG---QWMPEGIPFCVRW 79 (87)
Q Consensus 19 ~C-~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~G--~~~~~C~~~g---~Ws~~~~p~C~~~ 79 (87)
.| +.||.+.|+.+. ...|..|++|.|.|+.||.+.+ +..++|..++ .|+. .+.|.+.
T Consensus 2 ~C~g~PP~l~nA~~~--~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~--~~fC~~~ 64 (217)
T 2b5i_D 2 LCDDDPPEIPHATFK--AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN--QCQCTSS 64 (217)
T ss_dssp CCCSCCCCCTTEEEE--CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC--CCCEEEC
T ss_pred CCCCCCCCCcccccc--CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC--Cceeecc
Confidence 47 778889998864 4679999999999999998874 6789997555 4986 4788653
No 73
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=98.22 E-value=2.4e-06 Score=55.29 Aligned_cols=55 Identities=22% Similarity=0.498 Sum_probs=42.0
Q ss_pred cccCCCCCCCCCeEEEecCCCcCCCCEEEEEcCCCCEEc--CCCceeeCCCCccCCC----CCCeEeecc
Q psy6641 17 YEECRFPGAPAHSSIVFSNETLSPGTVATYACERGFELL--GPSRRVCDKTGQWMPE----GIPFCVRWC 80 (87)
Q Consensus 17 ~~~C~~p~~~~~g~~~~~~~~~~~g~~~~~~C~~gy~l~--G~~~~~C~~~g~Ws~~----~~p~C~~~~ 80 (87)
...|+.|+.++||.+.. .++|+|++.|.|. |+...+|.++|+|... .+|.|++.|
T Consensus 30 ~~~c~~p~~~~~g~~~~---------~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p~C 90 (347)
T 4f4o_C 30 DDSCPKPPEIPKGYVEH---------MVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEAVC 90 (347)
T ss_dssp ---CCCCCCBTTEEEEE---------EEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEECC
T ss_pred CCcCCCCCCCCCceece---------eeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccCCC
Confidence 34799999999998742 3899999999875 5677899999999753 158998764
No 74
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=98.00 E-value=4e-05 Score=49.12 Aligned_cols=62 Identities=19% Similarity=0.485 Sum_probs=47.0
Q ss_pred cCCCCCCCCCeEEEec--CCCcCCCCEEEEEcCCCC-EEcCC--------CceeeCCCCccCCC----CCCeEeecc
Q psy6641 19 ECRFPGAPAHSSIVFS--NETLSPGTVATYACERGF-ELLGP--------SRRVCDKTGQWMPE----GIPFCVRWC 80 (87)
Q Consensus 19 ~C~~p~~~~~g~~~~~--~~~~~~g~~~~~~C~~gy-~l~G~--------~~~~C~~~g~Ws~~----~~p~C~~~~ 80 (87)
+|..|..+.||.+.+. .....+++.++|.|+..| .|.+. ...+|..+|.|... ..|.|.+.|
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~~C 77 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVC 77 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEECC
T ss_pred CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCCCC
Confidence 5899999999998763 245778999999999876 56654 56899999999752 157777654
No 75
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=95.61 E-value=0.0037 Score=40.29 Aligned_cols=30 Identities=7% Similarity=0.190 Sum_probs=14.5
Q ss_pred eeEEc--ceecCCCC--CcccCCCCCCCCCeEEE
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPGAPAHSSIV 32 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~~~~~g~~~ 32 (87)
.++|+ |+|+...| +.+.|+.|..+.||.+.
T Consensus 327 ~~~C~~~g~Ws~~~P~C~~~~Cg~p~~~~ng~vt 360 (361)
T 4aqb_A 327 QIECLKDGTWSNKIPTCKKNEIDLESELKSEQVT 360 (361)
T ss_dssp EEEBCTTSCBSSCCCEEEECC-------------
T ss_pred eeEECCCCeeCCCCCeeeEEeCCCCCCCCCCccc
Confidence 46898 99999988 67899999999999864
No 76
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.55 E-value=0.018 Score=28.83 Aligned_cols=22 Identities=18% Similarity=0.193 Sum_probs=17.9
Q ss_pred eeEEc--ceecCCCC--CcccCCCCC
Q psy6641 3 NMKCH--NLVLPEVS--EYEECRFPG 24 (87)
Q Consensus 3 ~~~C~--g~W~~~~~--~~~~C~~p~ 24 (87)
.++|+ |+|+...| +.+.|+.|+
T Consensus 47 ~~~C~~~g~Ws~~~P~C~~v~C~~P~ 72 (74)
T 2yra_A 47 TLTCQWDLSWSSDPPFCEKTEESGPS 72 (74)
T ss_dssp EEEBCTTSCBSSCCCEEEECSCCSSS
T ss_pred ceEECCCCEECCCCCEEeecCCcCCC
Confidence 57999 89998888 577898775
No 77
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=90.79 E-value=0.16 Score=28.02 Aligned_cols=33 Identities=24% Similarity=0.628 Sum_probs=23.8
Q ss_pred cCCCCEEEEEcCCCCE---EcCCCceeeCCCCccCC
Q psy6641 38 LSPGTVATYACERGFE---LLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~---l~G~~~~~C~~~g~Ws~ 70 (87)
-..|++|...|..-|. -.|...+.|+.+|+|+.
T Consensus 60 t~~G~~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 60 VAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 95 (115)
T ss_dssp EETTCEEEEECCSSSTTCCTTSEEEEEBCTTSCBCB
T ss_pred CCCCCEEEecCchhhcCCCCCCcEEeecCCCCCccc
Confidence 4468889999976432 23456789999999974
No 78
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=88.22 E-value=0.17 Score=28.09 Aligned_cols=33 Identities=24% Similarity=0.573 Sum_probs=24.6
Q ss_pred cCCCCEEEEEcCCCCE-----EcCCCceeeCCCCccCC
Q psy6641 38 LSPGTVATYACERGFE-----LLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~-----l~G~~~~~C~~~g~Ws~ 70 (87)
-..|++|...|..-|. ..|...+.|+.+|+|+.
T Consensus 60 t~~G~~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~~ 97 (119)
T 1u34_A 60 SAPGALVERPCPEYFNGIKYNTTRNAYRECLENGTWAS 97 (119)
T ss_dssp CCTTCBCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCCS
T ss_pred CCCCCEEEecCccccCCcccCCCCeeecCCCCCCcCCC
Confidence 3457888888877543 24567789999999975
No 79
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=88.10 E-value=0.23 Score=26.44 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=23.4
Q ss_pred cCCCCEEEEEcCCCCE-----EcCCCceeeCCCCccCC
Q psy6641 38 LSPGTVATYACERGFE-----LLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~-----l~G~~~~~C~~~g~Ws~ 70 (87)
-..|+++...|..-+. ..|...+.|..+|+|..
T Consensus 44 t~~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 44 TPANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp EETTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCCCEEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 3458888889975322 23446789999999964
No 80
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=87.63 E-value=0.095 Score=27.26 Aligned_cols=31 Identities=23% Similarity=0.466 Sum_probs=21.1
Q ss_pred CCCEEEEEcCCCCE-----EcCCCceeeCCCCccCC
Q psy6641 40 PGTVATYACERGFE-----LLGPSRRVCDKTGQWMP 70 (87)
Q Consensus 40 ~g~~~~~~C~~gy~-----l~G~~~~~C~~~g~Ws~ 70 (87)
.|+++...|..-|. ..+...+.|+++|+|+.
T Consensus 36 ~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 36 AGQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp SSBCCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCCEEEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 35566666665332 34567899999999975
No 81
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=86.67 E-value=0.38 Score=26.66 Aligned_cols=32 Identities=25% Similarity=0.581 Sum_probs=23.0
Q ss_pred cCCCCEEEEEcCCCCE-----EcCCCceeeCCCCccC
Q psy6641 38 LSPGTVATYACERGFE-----LLGPSRRVCDKTGQWM 69 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~-----l~G~~~~~C~~~g~Ws 69 (87)
-..|++|...|..-+. -.|...+.|+++|+|.
T Consensus 52 t~~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~ 88 (122)
T 3c5t_A 52 GEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWL 88 (122)
T ss_dssp BCTTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSBC
T ss_pred CCCCcEEEeeCcchhhCccccccceEecCCCCCCccc
Confidence 4458888888877542 2344578999999993
No 82
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=86.37 E-value=0.66 Score=25.06 Aligned_cols=33 Identities=24% Similarity=0.608 Sum_probs=22.8
Q ss_pred cCCCCEEEEEcCCCCEEc------CCCceeeCCCCccCCC
Q psy6641 38 LSPGTVATYACERGFELL------GPSRRVCDKTGQWMPE 71 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~l~------G~~~~~C~~~g~Ws~~ 71 (87)
-..|++|...|..-|... |...+.|+++| |+..
T Consensus 51 t~~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws~~ 89 (106)
T 2jod_A 51 AHVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEP 89 (106)
T ss_dssp CBTTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCC
T ss_pred CCCCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CCCC
Confidence 345777888887755322 34568899999 9865
No 83
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=86.17 E-value=0.25 Score=27.29 Aligned_cols=33 Identities=24% Similarity=0.557 Sum_probs=24.4
Q ss_pred cCCCCEEEEEcCCCCE----EcCCCceeeCCCCccCCC
Q psy6641 38 LSPGTVATYACERGFE----LLGPSRRVCDKTGQWMPE 71 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~----l~G~~~~~C~~~g~Ws~~ 71 (87)
-..|+++...|..-|. ..|...+.|+++| |+..
T Consensus 63 t~~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws~~ 99 (116)
T 2x57_A 63 ANVGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WSET 99 (116)
T ss_dssp BCTTCEEEEECCGGGGGGBSSCCEEEEEEETTE-ECCC
T ss_pred CCCCCEEEecCcccccCccCCCCeEEeeCCccc-CCCC
Confidence 4458889999987543 2355678999999 9864
No 84
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=85.70 E-value=0.25 Score=27.98 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=24.9
Q ss_pred CcCCCCEEEEEcCCCCEE-----cCCCceeeCCCCccCC
Q psy6641 37 TLSPGTVATYACERGFEL-----LGPSRRVCDKTGQWMP 70 (87)
Q Consensus 37 ~~~~g~~~~~~C~~gy~l-----~G~~~~~C~~~g~Ws~ 70 (87)
.-..|+++...|..-+.. .|...+.|+++|+|+.
T Consensus 70 ~t~~G~~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~~ 108 (135)
T 2qkh_A 70 YAAPNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWGL 108 (135)
T ss_dssp CBCTTEEEEEECCTTSTTHHHHTTCEEEEEECTTSCBCS
T ss_pred CCCCCCEEEecCchhhcCcccCCCceEeccCCCCCCCCC
Confidence 344688999999886532 3455789999999973
No 85
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=80.62 E-value=0.51 Score=24.84 Aligned_cols=33 Identities=30% Similarity=0.555 Sum_probs=22.6
Q ss_pred cCCCCEEEEEcCCCCE----EcCCCceeeCCCCccCCC
Q psy6641 38 LSPGTVATYACERGFE----LLGPSRRVCDKTGQWMPE 71 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~----l~G~~~~~C~~~g~Ws~~ 71 (87)
-..|+++...|..-|. ..|...+.|+.+| |+..
T Consensus 37 t~~G~~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~~~ 73 (92)
T 2xdg_A 37 AGSGEWVTLPCPDFFSHFSSESGAVKRDCTITG-WSEP 73 (92)
T ss_dssp BCTTEEEEECCCGGGGGTCSSCCCEEEEEETTE-ECCC
T ss_pred CCCCCEEEecCcchhccccccCCeEecCCCccc-CCCC
Confidence 3457778888876543 2345678999999 8764
No 86
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=74.81 E-value=0.78 Score=30.27 Aligned_cols=34 Identities=26% Similarity=0.685 Sum_probs=23.7
Q ss_pred CCCCEEEEEcCCCCEEc------CCCceeeCCCCccCCCCCC
Q psy6641 39 SPGTVATYACERGFELL------GPSRRVCDKTGQWMPEGIP 74 (87)
Q Consensus 39 ~~g~~~~~~C~~gy~l~------G~~~~~C~~~g~Ws~~~~p 74 (87)
..|++|...|..-+... |...+.|+.+| |+.. .|
T Consensus 418 ~~g~~~~~~cp~~~~~~~~~~~~~~~~r~c~~~g-w~~~-~~ 457 (475)
T 3n94_A 418 HVGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEP-FP 457 (475)
T ss_dssp CTTCEEEEECCGGGGGTCTTGGGCEEEEEEETTE-ECCC-BS
T ss_pred CCCCeEecccchhhcCcCcCCCCCceeeecCccc-CCCC-CC
Confidence 45888888887543322 44568999999 9875 44
No 87
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=65.72 E-value=3.6 Score=17.79 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=15.0
Q ss_pred EcCCCCEEcCC-CceeeCCCCccC
Q psy6641 47 ACERGFELLGP-SRRVCDKTGQWM 69 (87)
Q Consensus 47 ~C~~gy~l~G~-~~~~C~~~g~Ws 69 (87)
.|.+|..+... +.=+|..+|.|+
T Consensus 3 ~C~pG~~~~~dCNtC~C~~~G~W~ 26 (36)
T 2xtt_A 3 ECEPGQTKKQDCNTCRCGSDGVWA 26 (36)
T ss_dssp CSCTTCEEEETTEEEEECTTSCEE
T ss_pred cCCCCCEEECCCCccCCCCCCEEe
Confidence 36666655433 455787799995
No 88
>3h3g_A Fusion protein of maltose-binding periplasmic DOM human parathyroid hormone receptor...; GPCR, extracellular domain, PTHRP, PTH, PThr1, sugar transpo transport, membrane protein; HET: MAL; 1.94A {Escherichia coli} PDB: 3c4m_A* 3l2j_A*
Probab=60.50 E-value=5 Score=27.04 Aligned_cols=33 Identities=30% Similarity=0.572 Sum_probs=24.2
Q ss_pred cCCCCEEEEEcCCCCEE---cCCCceeeCCCCccCC
Q psy6641 38 LSPGTVATYACERGFEL---LGPSRRVCDKTGQWMP 70 (87)
Q Consensus 38 ~~~g~~~~~~C~~gy~l---~G~~~~~C~~~g~Ws~ 70 (87)
-..|+++...|..-+.. .|...+.|+.+|.|..
T Consensus 467 ~~~g~~~~~~Cp~~~~~~~~~~~~~r~C~~~g~w~~ 502 (539)
T 3h3g_A 467 GAPGEVVAVPCPDYIYDFNHKGHAYRRCDRNGSWEL 502 (539)
T ss_dssp BCTTCEEEEECCTTCTTSCTTCEEEEEBCTTSCBCB
T ss_pred CCCCCEEEeeCcchhccCCcCCceEeecCCCccccc
Confidence 45699999999764422 2445689999999964
No 89
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=54.20 E-value=13 Score=20.57 Aligned_cols=21 Identities=14% Similarity=0.232 Sum_probs=15.1
Q ss_pred CEEEEEcCCCCEEcCCCceeeC
Q psy6641 42 TVATYACERGFELLGPSRRVCD 63 (87)
Q Consensus 42 ~~~~~~C~~gy~l~G~~~~~C~ 63 (87)
...+..|.+||.|.+.. ..|.
T Consensus 137 g~~~C~C~~Gy~l~~~~-~~C~ 157 (159)
T 1nzi_A 137 GGYFCSCPPEYFLHDDM-KNCG 157 (159)
T ss_dssp TEEEEECCTTCEECTTS-SCEE
T ss_pred CCEEEecCCCcEECCCC-Cccc
Confidence 34788999999998754 3463
No 90
>4dlq_A Latrophilin-1; GAIN domain, includes the GPS motif, hormone binding domain, autoproteolysis, A-latrotoxin, extracellular domain; HET: NAG; 1.85A {Rattus norvegicus}
Probab=45.08 E-value=17 Score=23.58 Aligned_cols=39 Identities=23% Similarity=0.562 Sum_probs=29.4
Q ss_pred CcCCCCEEEEEcCCCCEEcCCCceeeCC-CCccCC--CCCCeEe
Q psy6641 37 TLSPGTVATYACERGFELLGPSRRVCDK-TGQWMP--EGIPFCV 77 (87)
Q Consensus 37 ~~~~g~~~~~~C~~gy~l~G~~~~~C~~-~g~Ws~--~~~p~C~ 77 (87)
....|..+...|..|.. |...+.|.. +|.|.. +..-.|.
T Consensus 36 ~t~~G~~a~~~CP~~~~--g~a~r~C~~~~g~W~~~~p~~~~C~ 77 (381)
T 4dlq_A 36 ATQQGMLVERPCPKGTR--GIASFQCLPALGLWNPRGPDLSNCT 77 (381)
T ss_dssp CEETTCEEEEECCTTCB--SEEEEEBCTTTCSBCTTCCBCTTCB
T ss_pred CCCCCCEEeCcCccCCC--ceEEEEecCCCCEeecCCCchhhcC
Confidence 35579999999999874 888899974 689973 2255676
No 91
>1wo9_A HI-1, trypsin inhibitor; hydrolase inhibitor; NMR {Synthetic} SCOP: g.4.1.1
Probab=39.42 E-value=21 Score=15.10 Aligned_cols=13 Identities=31% Similarity=0.621 Sum_probs=8.9
Q ss_pred CceeeCCCCccCC
Q psy6641 58 SRRVCDKTGQWMP 70 (87)
Q Consensus 58 ~~~~C~~~g~Ws~ 70 (87)
+.-+|..+|.|.=
T Consensus 15 NtCtC~~~g~W~C 27 (35)
T 1wo9_A 15 NTCTCTPTGIWGC 27 (35)
T ss_dssp EEEEECTTSCEEC
T ss_pred CceECCCCCEEcC
Confidence 3467766889964
No 92
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=35.29 E-value=18 Score=16.45 Aligned_cols=20 Identities=25% Similarity=0.650 Sum_probs=13.5
Q ss_pred EEEEEcCCCCEEcCCCceeeC
Q psy6641 43 VATYACERGFELLGPSRRVCD 63 (87)
Q Consensus 43 ~~~~~C~~gy~l~G~~~~~C~ 63 (87)
..+=.|.+||.|.... .+|.
T Consensus 20 s~~C~C~~Gy~L~~Dg-~tC~ 39 (53)
T 2bz6_L 20 KRSCRCHEGYSLLADG-VSCT 39 (53)
T ss_dssp EEEEECCTTEEECTTS-SCEE
T ss_pred CEEeeCCCCCEECCCC-Cccc
Confidence 4456899999997543 3453
No 93
>1vmo_A Vitelline membrane outer layer protein I; membrane protein; 2.20A {Gallus gallus} SCOP: b.77.1.1
Probab=33.73 E-value=28 Score=20.19 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=20.5
Q ss_pred CCEEEEEcCCCCEEcCCCceeeCCCCccCCCCCCeE
Q psy6641 41 GTVATYACERGFELLGPSRRVCDKTGQWMPEGIPFC 76 (87)
Q Consensus 41 g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C 76 (87)
-.-|+|.|..|..|.|... .-|.|..- ...|
T Consensus 103 ~Nni~~~C~~g~~l~g~~~----~~G~wg~~-~~~C 133 (163)
T 1vmo_A 103 ANNIQFRCSDEAVLVGDGL----SWGRFGPW-SKRC 133 (163)
T ss_dssp CCEEEEEETTSCEEECSCC----CCSEECCC-CCCC
T ss_pred eeeEEEEcCCCCEEccCCC----CCcccccc-cCcc
Confidence 3568999999999988642 34556542 2346
No 94
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=32.99 E-value=21 Score=16.28 Aligned_cols=13 Identities=31% Similarity=0.779 Sum_probs=10.1
Q ss_pred EEEcCCCCEEcCC
Q psy6641 45 TYACERGFELLGP 57 (87)
Q Consensus 45 ~~~C~~gy~l~G~ 57 (87)
.=.|.+||.|...
T Consensus 23 ~C~C~~Gy~L~~d 35 (55)
T 2jkh_L 23 VCSCARGYTLADN 35 (55)
T ss_dssp EEECCTTEEECTT
T ss_pred EEeCCCCCEECCC
Confidence 4579999999754
No 95
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=32.35 E-value=19 Score=16.83 Aligned_cols=19 Identities=21% Similarity=0.733 Sum_probs=13.2
Q ss_pred EEEEcCCCCEEcCCCceeeC
Q psy6641 44 ATYACERGFELLGPSRRVCD 63 (87)
Q Consensus 44 ~~~~C~~gy~l~G~~~~~C~ 63 (87)
..=.|.+||.|.... .+|.
T Consensus 21 ~~C~C~~Gy~L~~D~-~tC~ 39 (59)
T 2wph_E 21 VVCSCTEGYRLAENQ-KSCE 39 (59)
T ss_dssp EEEECCTTEEECTTS-SCEE
T ss_pred EEeeCCCCcEECCCC-Cccc
Confidence 346899999997543 3564
No 96
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=30.87 E-value=18 Score=16.28 Aligned_cols=17 Identities=29% Similarity=0.667 Sum_probs=11.3
Q ss_pred EEcCCCCEEcCCCceeeC
Q psy6641 46 YACERGFELLGPSRRVCD 63 (87)
Q Consensus 46 ~~C~~gy~l~G~~~~~C~ 63 (87)
=.|..||.|.... .+|.
T Consensus 21 C~C~~Gy~L~~d~-~tC~ 37 (51)
T 1kig_L 21 CSCAHGYVLGDDS-KSCV 37 (51)
T ss_dssp CCCCTTEEECTTS-SCEE
T ss_pred EeCCCCcEECCCC-Cccc
Confidence 4689999997543 3453
No 97
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=29.92 E-value=32 Score=19.30 Aligned_cols=19 Identities=26% Similarity=0.651 Sum_probs=12.6
Q ss_pred EEEEcCCCCEEcCCCceeeC
Q psy6641 44 ATYACERGFELLGPSRRVCD 63 (87)
Q Consensus 44 ~~~~C~~gy~l~G~~~~~C~ 63 (87)
....|.+||.|.+. ..+|.
T Consensus 148 ~~C~C~~Gy~l~~d-~~~C~ 166 (170)
T 1szb_A 148 FYCSCRAGYVLHRN-KRTCS 166 (170)
T ss_dssp EEEECCTTEEECTT-SSCEE
T ss_pred EEEeCCCCcEECCC-CCccc
Confidence 55678888888764 34453
No 98
>4dlo_A Brain-specific angiogenesis inhibitor 3; GAIN domain, includes GPS motif, autoproteolytic fold, extra signaling protein; HET: NAG FUL; 2.30A {Homo sapiens}
Probab=26.27 E-value=20 Score=23.40 Aligned_cols=39 Identities=23% Similarity=0.545 Sum_probs=28.1
Q ss_pred CcCCCCEEEEEcCCCCEEcCCCceeeCCC--C--ccCCCCCCeEe
Q psy6641 37 TLSPGTVATYACERGFELLGPSRRVCDKT--G--QWMPEGIPFCV 77 (87)
Q Consensus 37 ~~~~g~~~~~~C~~gy~l~G~~~~~C~~~--g--~Ws~~~~p~C~ 77 (87)
....|..+...|..|+. |...+.|..+ | .|..+..-.|.
T Consensus 32 ~T~~G~~a~~~Cp~g~~--G~a~r~C~~~~~g~~~W~~p~~~~Ct 74 (382)
T 4dlo_A 32 RTPAGDLAFNQCPLNAT--GTTSRRCSLSLHGVAFWEQPSFARCI 74 (382)
T ss_dssp CEETTCEEEECCCTTEE--EEEEEEEEECTTSCEEECCCEEEEEE
T ss_pred CCCCCCeEEccCcCCCc--eeEEEEeCCCCCCceecCCCCcccCC
Confidence 34569999999999965 7788899753 4 69753244575
No 99
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=25.02 E-value=47 Score=14.51 Aligned_cols=14 Identities=29% Similarity=0.558 Sum_probs=10.3
Q ss_pred EEEEcCCCCEEcCC
Q psy6641 44 ATYACERGFELLGP 57 (87)
Q Consensus 44 ~~~~C~~gy~l~G~ 57 (87)
..-.|..||.+...
T Consensus 33 y~C~C~~Gy~~~~d 46 (53)
T 1apq_A 33 YFCSCRPGYELQED 46 (53)
T ss_dssp EEEECSTTCEECTT
T ss_pred eEEECCCCCeECCC
Confidence 34578999998653
No 100
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=24.11 E-value=27 Score=16.96 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=9.0
Q ss_pred EcCCCCEEcCC
Q psy6641 47 ACERGFELLGP 57 (87)
Q Consensus 47 ~C~~gy~l~G~ 57 (87)
.|.+||+|.+.
T Consensus 56 ~C~~Gy~~~~~ 66 (71)
T 2kl7_A 56 PCPPGYEPDDQ 66 (71)
T ss_dssp CSCTTEEEECC
T ss_pred CCCCCeeeCCC
Confidence 69999998753
No 101
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=20.11 E-value=1e+02 Score=16.37 Aligned_cols=19 Identities=26% Similarity=0.588 Sum_probs=14.4
Q ss_pred CCEEEEEcCCCCEEcCCCc
Q psy6641 41 GTVATYACERGFELLGPSR 59 (87)
Q Consensus 41 g~~~~~~C~~gy~l~G~~~ 59 (87)
--.+.|.|+.|..|+....
T Consensus 77 CGAvdYFC~~chgLiSKkR 95 (101)
T 2jne_A 77 CGAVDYFCQHGHGLISKKR 95 (101)
T ss_dssp TTEEEEEETTTTEEECTTT
T ss_pred hcCcchhhccCCceeecce
Confidence 4568899999988886543
Done!