BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6642
(292 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|348519190|ref|XP_003447114.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Oreochromis niloticus]
Length = 240
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 164/195 (84%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QFI
Sbjct: 44 LAHTDIKIPDFSDYRRPEVMDPNKSSQESSEARRAFSYLVTGATTVVGVYAAKTVVTQFI 103
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHRT+KEI TEQ N+++LRD
Sbjct: 104 SSMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTEKEIATEQAVNLAELRD 163
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D DRV +P W++++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 164 PEHDKDRVTNPKWVIVLGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPLN 223
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ ++
Sbjct: 224 LEVPYYEFQDDETVV 238
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 83/102 (81%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QFI
Sbjct: 44 LAHTDIKIPDFSDYRRPEVMDPNKSSQESSEARRAFSYLVTGATTVVGVYAAKTVVTQFI 103
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 104 SSMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 145
>gi|288814596|gb|ADC54384.1| ubiquinol-cytochrome c reductase [Locusta migratoria manilensis]
Length = 272
Score = 286 bits (731), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 130/193 (67%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+DI+ PDFS YRR D K E RK+FTY++AG ++ G AK++V QF+SS
Sbjct: 78 AHTDIQVPDFSAYRRHSVTDPTTKNTEPEARKSFTYLVAGTGAIAGAYGAKALVTQFVSS 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLA+A IEV L IPEG+SVTFKWRGKPLFIRHRT EI EQ+ N+S LRDPQ
Sbjct: 138 MSASADVLALAKIEVKLAEIPEGKSVTFKWRGKPLFIRHRTAAEIQQEQSVNVSTLRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D++RV+ P WLV++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDAS RIRKGPAP N+E
Sbjct: 198 HDNERVQKPEWLVVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASRRIRKGPAPLNLE 257
Query: 180 VPPYQFGDEGILI 192
VP Y F DEG L+
Sbjct: 258 VPAYVFQDEGTLV 270
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/100 (63%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+DI+ PDFS YRR D K E RK+FTY++AG ++ G AK++V QF+SS
Sbjct: 78 AHTDIQVPDFSAYRRHSVTDPTTKNTEPEARKSFTYLVAGTGAIAGAYGAKALVTQFVSS 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLA+A IEV L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 138 MSASADVLALAKIEVKLAEIPEGKSVTFKWRGKPLFIRHR 177
>gi|209734266|gb|ACI68002.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Salmo salar]
Length = 273
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 159/195 (81%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR +P+K +E+ RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELLDPNKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR++KEI E+ ++++LRD
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHRSEKEIAAEEAVDMAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVANPKWIIVIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE +I
Sbjct: 257 LEVPYYEFPDEDTVI 271
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR +P+K +E+ RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELLDPNKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHR 178
>gi|283046728|ref|NP_001164310.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Tribolium castaneum]
gi|270004785|gb|EFA01233.1| hypothetical protein TcasGA2_TC000043 [Tribolium castaneum]
Length = 268
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 132/194 (68%), Positives = 156/194 (80%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI PD+S YRRD + P +++ RK+FTY+IAG +V AK+VV QF+S
Sbjct: 73 AHTDINVPDWSHYRRDPVKAPTAKSTDSEEGRKSFTYLIAGAGTVTAAYAAKAVVGQFVS 132
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHRT +EI TEQ N+S LRDP
Sbjct: 133 SMSASADVLALAKIEIKLGEIPEGKSVTFKWRGKPLFIRHRTAEEIATEQGVNVSSLRDP 192
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D+DRVK P WLVI+G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 193 QHDNDRVKKPEWLVILGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 252
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F D+ L+
Sbjct: 253 EVPYYEFPDDTTLV 266
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 76/101 (75%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI PD+S YRRD + P +++ RK+FTY+IAG +V AK+VV QF+S
Sbjct: 73 AHTDINVPDWSHYRRDPVKAPTAKSTDSEEGRKSFTYLIAGAGTVTAAYAAKAVVGQFVS 132
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 133 SMSASADVLALAKIEIKLGEIPEGKSVTFKWRGKPLFIRHR 173
>gi|37747939|gb|AAH59475.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Danio rerio]
Length = 273
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 162/195 (83%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR NP+K +E+ R+AF+Y++ G + VVG+ AK+VV QF+
Sbjct: 77 FAHTDIKIPDFSDYRRPEVLNPNKQSQESGDARRAFSYLMTGSTLVVGVYTAKTVVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI+TE N+++LRD
Sbjct: 137 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHRTEKEIETEAGVNLAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +PSW+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVVNPSWVIVIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ ++
Sbjct: 257 LEVPYYEFPDDDTVV 271
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR NP+K +E+ R+AF+Y++ G + VVG+ AK+VV QF+
Sbjct: 77 FAHTDIKIPDFSDYRRPEVLNPNKQSQESGDARRAFSYLMTGSTLVVGVYTAKTVVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHR 178
>gi|157073897|ref|NP_001096664.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Danio rerio]
gi|292616189|ref|XP_002662916.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 1 [Danio rerio]
gi|326669539|ref|XP_003199036.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 2 [Danio rerio]
gi|156230934|gb|AAI52278.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Danio rerio]
Length = 273
Score = 285 bits (728), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 162/195 (83%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR NP+K +E+ R+AF+Y++ G + VVG+ AK+VV QF+
Sbjct: 77 FAHTDIKIPDFSDYRRPEVLNPNKQSQESGDARRAFSYLMTGSTLVVGVYTAKTVVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI+TE N+++LRD
Sbjct: 137 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHRTEKEIETEAGVNLAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +PSW+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVVNPSWVIVIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ ++
Sbjct: 257 LEVPYYEFPDDDTVV 271
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 80/102 (78%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR NP+K +E+ R+AF+Y++ G + VVG+ AK+VV QF+
Sbjct: 77 FAHTDIKIPDFSDYRRPEVLNPNKQSQESGDARRAFSYLMTGSTLVVGVYTAKTVVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHR 178
>gi|158299624|ref|XP_319708.4| AGAP008955-PA [Anopheles gambiae str. PEST]
gi|157013606|gb|EAA14787.4| AGAP008955-PA [Anopheles gambiae str. PEST]
Length = 265
Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 157/193 (81%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+DIR PDFS YRRD + P+ K R AFTY++ GG++V AKS+V+ F+SS
Sbjct: 71 AHTDIRVPDFSDYRRDQVKRPNAKNDSADDRAAFTYLLVGGAAVSTAYVAKSLVSTFVSS 130
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L IPEG+S+TFKWRGKPLFIRHRT EI+ EQ+ ++ LRDPQ
Sbjct: 131 MSASADVLAMSKIEIKLADIPEGKSMTFKWRGKPLFIRHRTSAEIEAEQSVAVATLRDPQ 190
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D++RV+ P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 191 NDAERVQKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 250
Query: 180 VPPYQFGDEGILI 192
VP Y+F ++G+LI
Sbjct: 251 VPHYEFPEDGLLI 263
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+DIR PDFS YRRD + P+ K R AFTY++ GG++V AKS+V+ F+SS
Sbjct: 71 AHTDIRVPDFSDYRRDQVKRPNAKNDSADDRAAFTYLLVGGAAVSTAYVAKSLVSTFVSS 130
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAM+ IE+ L IPEG+S+TFKWRGKPLFIRHR
Sbjct: 131 MSASADVLAMSKIEIKLADIPEGKSMTFKWRGKPLFIRHR 170
>gi|432862546|ref|XP_004069909.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Oryzias latipes]
Length = 235
Score = 283 bits (725), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 163/195 (83%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 39 LAHTDIKIPDFSDYRRPEVLDPNKSSQESSEARRAFSYLLTGATTVVGVYAAKTVVTQFV 98
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI TE+ N+++LRD
Sbjct: 99 SSMSASADVLALSQIEIKLGDIPEGKNMTFKWRGKPLFVRHRTEKEIATEEAVNLTELRD 158
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W++++G+CTHLGCVPI+NAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 159 PQHDKDRVINPKWVIVLGVCTHLGCVPISNAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 218
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE ++
Sbjct: 219 LEVPFYEFPDEETVV 233
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 82/102 (80%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 39 LAHTDIKIPDFSDYRRPEVLDPNKSSQESSEARRAFSYLLTGATTVVGVYAAKTVVTQFV 98
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 99 SSMSASADVLALSQIEIKLGDIPEGKNMTFKWRGKPLFVRHR 140
>gi|289742957|gb|ADD20226.1| ubiquinol cytochrome c reductase subunit RIP1 [Glossina morsitans
morsitans]
Length = 258
Score = 283 bits (725), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 63 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 122
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI TE+N ++ LRDP
Sbjct: 123 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHRTGAEIATERNVAVATLRDP 182
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q+D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 183 QSDDQRVTKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 242
Query: 179 EVPPYQFGDEGILI 192
EVP + F DEG L+
Sbjct: 243 EVPAHTFPDEGTLV 256
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 63 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 122
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 123 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHR 163
>gi|289742955|gb|ADD20225.1| ubiquinol cytochrome c reductase subunit RIP1 [Glossina morsitans
morsitans]
Length = 248
Score = 283 bits (723), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 53 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 112
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI TE+N ++ LRDP
Sbjct: 113 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHRTGAEIATERNVAVATLRDP 172
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q+D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 173 QSDDQRVTKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 232
Query: 179 EVPPYQFGDEGILI 192
EVP + F DEG L+
Sbjct: 233 EVPAHTFPDEGTLV 246
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 53 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 112
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 113 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHR 153
>gi|312383020|gb|EFR28261.1| hypothetical protein AND_04037 [Anopheles darlingi]
Length = 242
Score = 283 bits (723), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 157/194 (80%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI+TPDFS YRR+ + P+ + R AFTY++ GG++V AKS+V+ FIS
Sbjct: 47 FAHTDIQTPDFSDYRREQVKRPNARNDSADDRAAFTYLLVGGAAVSTAYVAKSLVSTFIS 106
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L IPEG+S+TFKWRGKPLFIRHRT +EI+ EQ+ ++ LRDP
Sbjct: 107 SMSASADVLAMSKIEIKLGDIPEGKSMTFKWRGKPLFIRHRTAQEIEAEQSVAVATLRDP 166
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RV+ P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 167 QNDGERVQKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 226
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F EG+L+
Sbjct: 227 EVPYYEFPQEGLLV 240
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/101 (60%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI+TPDFS YRR+ + P+ + R AFTY++ GG++V AKS+V+ FIS
Sbjct: 47 FAHTDIQTPDFSDYRREQVKRPNARNDSADDRAAFTYLLVGGAAVSTAYVAKSLVSTFIS 106
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L IPEG+S+TFKWRGKPLFIRHR
Sbjct: 107 SMSASADVLAMSKIEIKLGDIPEGKSMTFKWRGKPLFIRHR 147
>gi|170064087|ref|XP_001867379.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Culex
quinquefasciatus]
gi|167881520|gb|EDS44903.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Culex
quinquefasciatus]
Length = 241
Score = 283 bits (723), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD---RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAH+DI+TPDFS YRRD R K +R AFTY++ GG+ V AKS+V+ F+S
Sbjct: 46 LAHTDIQTPDFSDYRRDQVKRANAKNSSADERAAFTYLMVGGACVSTAYVAKSLVSTFVS 105
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI EQ LRDP
Sbjct: 106 SMSASADVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTPAEISQEQAVATGTLRDP 165
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D++RVK+P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 166 QTDAERVKNPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 225
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F ++ +++
Sbjct: 226 EVPFYEFPEDNLVV 239
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD---RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAH+DI+TPDFS YRRD R K +R AFTY++ GG+ V AKS+V+ F+S
Sbjct: 46 LAHTDIQTPDFSDYRRDQVKRANAKNSSADERAAFTYLMVGGACVSTAYVAKSLVSTFVS 105
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 106 SMSASADVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 146
>gi|253795465|ref|NP_001156726.1| rieske iron-sulfur protein [Acyrthosiphon pisum]
gi|328698643|ref|XP_003240694.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Acyrthosiphon pisum]
Length = 262
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 159/195 (81%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
L H+D + PD++ YRR+ ++P +T R AFTYM+ G + M CAK++V++F+
Sbjct: 66 LVHTDFKIPDYTDYRRNSVKDPSASNRDTYENRNAFTYMVLGTAVTGTMFCAKAIVHKFV 125
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SM+ +ADVLA+A+IEV+LN IPEG++ T KWRGKPLF+RHRT EI+TEQNT++++LRD
Sbjct: 126 LSMAPAADVLALASIEVNLNDIPEGKNATIKWRGKPLFVRHRTTAEIETEQNTSLAELRD 185
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ DS RV+ P WLVI+G+CTHLGCVPIANAGDWGGYYCPCHGSHYDA+GRIRKGPAPTN
Sbjct: 186 PEDDSVRVQKPEWLVIVGVCTHLGCVPIANAGDWGGYYCPCHGSHYDAAGRIRKGPAPTN 245
Query: 178 MEVPPYQFGDEGILI 192
MEVPPY+F ++ L+
Sbjct: 246 MEVPPYKFINDNTLL 260
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
L H+D + PD++ YRR+ ++P +T R AFTYM+ G + M CAK++V++F+
Sbjct: 66 LVHTDFKIPDYTDYRRNSVKDPSASNRDTYENRNAFTYMVLGTAVTGTMFCAKAIVHKFV 125
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SM+ +ADVLA+A+IEV+LN IPEG++ T KWRGKPLF+RHR
Sbjct: 126 LSMAPAADVLALASIEVNLNDIPEGKNATIKWRGKPLFVRHR 167
>gi|308322147|gb|ADO28211.1| mitochondrial cytochrome b-c1 complex subunit rieske [Ictalurus
furcatus]
Length = 261
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 161/195 (82%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+D+R PDF+ YRR ++P +E+ R+AF+Y+I G ++VVG+ AK+ V QF+
Sbjct: 65 FAHTDVRIPDFTHYRRPEVQDPKTSSQESSEARRAFSYLITGSTAVVGVYAAKTAVTQFV 124
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI TE N ++S+LRD
Sbjct: 125 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHRTEKEIATEVNVDLSELRD 184
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+DRV PSW++++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 185 PQHDTDRVIKPSWVIVVGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPLN 244
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE ++
Sbjct: 245 LEVPYYEFPDEDTVV 259
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+D+R PDF+ YRR ++P +E+ R+AF+Y+I G ++VVG+ AK+ V QF+
Sbjct: 65 FAHTDVRIPDFTHYRRPEVQDPKTSSQESSEARRAFSYLITGSTAVVGVYAAKTAVTQFV 124
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 125 SSMSASADVLALSKIEIKLADIPEGKNMTFKWRGKPLFVRHR 166
>gi|323650032|gb|ADX97102.1| mitochondrial cytochrome b-c1 complex subunit rieske [Perca
flavescens]
Length = 241
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 163/194 (84%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+R PDFS YRR +P K +++ R+ F+Y++ G ++VVG+ AK+VV+QF+S
Sbjct: 46 AHTDVRVPDFSDYRRPEVLDPSKSSQDSSEGRRTFSYLVTGATTVVGVYAAKTVVSQFVS 105
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHRT+KEI TE N+++LRDP
Sbjct: 106 SMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTEKEIATEAGVNLAELRDP 165
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRV++PSW++++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 166 QHDKDRVQNPSWVIVLGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNL 225
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F D+ ++
Sbjct: 226 EVPYYEFPDDSTVV 239
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 81/101 (80%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+R PDFS YRR +P K +++ R+ F+Y++ G ++VVG+ AK+VV+QF+S
Sbjct: 46 AHTDVRVPDFSDYRRPEVLDPSKSSQDSSEGRRTFSYLVTGATTVVGVYAAKTVVSQFVS 105
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 106 SMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 146
>gi|90819978|gb|ABD98746.1| Rieske iron-sulfur protein 1 [Graphocephala atropunctata]
Length = 272
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 127/194 (65%), Positives = 153/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQ--EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI PDFS YRR R+P + RKAFTY+I GG +V AK+VV Q +S
Sbjct: 77 AHTDIEVPDFSAYRRKATRDPTSKNIDSDESRKAFTYLIVGGGAVATAYAAKTVVRQLVS 136
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLA+A IEV L+ IPEG+SVTFKWRGKPLFIRHRT +EI+ E+ +++LRDP
Sbjct: 137 TMSASADVLALAKIEVKLSAIPEGKSVTFKWRGKPLFIRHRTNQEIEVERGVPLAELRDP 196
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRV+ P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 197 QHDDDRVQKPEWLVLIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 256
Query: 179 EVPPYQFGDEGILI 192
E+P Y+F E +L+
Sbjct: 257 EIPTYEFQTEDLLV 270
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQ--EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI PDFS YRR R+P + RKAFTY+I GG +V AK+VV Q +S
Sbjct: 77 AHTDIEVPDFSAYRRKATRDPTSKNIDSDESRKAFTYLIVGGGAVATAYAAKTVVRQLVS 136
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLA+A IEV L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 137 TMSASADVLALAKIEVKLSAIPEGKSVTFKWRGKPLFIRHR 177
>gi|387914956|gb|AFK11087.1| cytochrome b-c1 complex subunit Rieske, mitochondrial
[Callorhinchus milii]
Length = 273
Score = 281 bits (718), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 158/195 (81%), Gaps = 6/195 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ-----RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AHSD++ PDFS YRR D Q+ +Q R+ F+Y+I G + + AK+VV QFI
Sbjct: 78 AHSDVKIPDFSDYRRADVMD-AQKTSQDSIDTRRGFSYLITGATLCMTAYAAKNVVTQFI 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR+ KE++ EQ N+++LRD
Sbjct: 137 SSMSASADVLAMSQIEVKLADIPEGKNMTFKWRGKPLFIRHRSPKEVEKEQAVNLAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ DSDRVK+P W+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAPTN
Sbjct: 197 PQLDSDRVKNPQWMIVIGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPTN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F + ++I
Sbjct: 257 LEVPPYEFTSDDVVI 271
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ-----RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AHSD++ PDFS YRR D Q+ +Q R+ F+Y+I G + + AK+VV QFI
Sbjct: 78 AHSDVKIPDFSDYRRADVMD-AQKTSQDSIDTRRGFSYLITGATLCMTAYAAKNVVTQFI 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR
Sbjct: 137 SSMSASADVLAMSQIEVKLADIPEGKNMTFKWRGKPLFIRHR 178
>gi|47225798|emb|CAF98278.1| unnamed protein product [Tetraodon nigroviridis]
Length = 240
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 161/195 (82%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 44 LAHTDIKIPDFSDYRRPEVIDPNKSSKESSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 103
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT KEI TE+ N+ +LRD
Sbjct: 104 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHRTDKEIATEEAVNLGELRD 163
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W++++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 164 PQHDKDRVINPRWVIVLGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPLN 223
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ +I
Sbjct: 224 LEVPFYEFPDDDTVI 238
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 82/102 (80%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DI+ PDFS YRR +P+K +E+ R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 44 LAHTDIKIPDFSDYRRPEVIDPNKSSKESSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 103
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 104 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHR 145
>gi|410912018|ref|XP_003969487.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Takifugu rubripes]
Length = 273
Score = 280 bits (717), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DIR PDF+ YRR D N Q R+ F+Y++ G ++VVG+ AK++V QF+
Sbjct: 77 FAHTDIRIPDFNDYRRPEVLDPNKSSQQSHDSRRTFSYLLTGATTVVGVYAAKTLVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI TE N+++LRD
Sbjct: 137 SSMSASADVLALSKIEIKLTDIPEGKNMTFKWRGKPLFVRHRTEKEIATENAVNLAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W++++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVMNPRWVIVLGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ ++
Sbjct: 257 LEVPYYEFPDDDTVV 271
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DIR PDF+ YRR D N Q R+ F+Y++ G ++VVG+ AK++V QF+
Sbjct: 77 FAHTDIRIPDFNDYRRPEVLDPNKSSQQSHDSRRTFSYLLTGATTVVGVYAAKTLVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLALSKIEIKLTDIPEGKNMTFKWRGKPLFVRHR 178
>gi|195386080|ref|XP_002051732.1| GJ10683 [Drosophila virilis]
gi|194148189|gb|EDW63887.1| GJ10683 [Drosophila virilis]
Length = 227
Score = 280 bits (716), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D+R PDFS YRRD D + + +RKAF+YM+ G +V G+ AK +VN F+ S
Sbjct: 33 AHTDLRVPDFSAYRRDSVKDERRRNESAEERKAFSYMLVGAGAVGGVYAAKGMVNAFLGS 92
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHRT EI+TE+ S LRDP+
Sbjct: 93 MSASADVLAMAKIEIKLGDIAEGKSVTFKWRGKPLFIRHRTPAEIETERAVPTSALRDPE 152
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 153 TDDQRVLKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 212
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG LI
Sbjct: 213 VPTHEFPDEGTLI 225
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D+R PDFS YRRD D + + +RKAF+YM+ G +V G+ AK +VN F+ S
Sbjct: 33 AHTDLRVPDFSAYRRDSVKDERRRNESAEERKAFSYMLVGAGAVGGVYAAKGMVNAFLGS 92
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHR
Sbjct: 93 MSASADVLAMAKIEIKLGDIAEGKSVTFKWRGKPLFIRHR 132
>gi|410908000|ref|XP_003967479.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Takifugu rubripes]
Length = 238
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YRR D N R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 42 LAHTDIKLPDFSDYRRPEVIDANKSSKDSSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 101
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI E+ N+ +LRD
Sbjct: 102 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHRTEKEIAAEEAVNLGELRD 161
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W++++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 162 PQHDKDRVLNPRWVIVLGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 221
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ +I
Sbjct: 222 LEVPFYEFPDDDTVI 236
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DI+ PDFS YRR D N R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 42 LAHTDIKLPDFSDYRRPEVIDANKSSKDSSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 101
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 102 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHR 143
>gi|157137763|ref|XP_001657170.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Aedes
aegypti]
gi|108880827|gb|EAT45052.1| AAEL003675-PA [Aedes aegypti]
Length = 266
Score = 279 bits (714), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 158/194 (81%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAH+DI+TPDFS YRRD + P+ K +R AFTY++ GG++V AKS+V+ F+S
Sbjct: 71 LAHTDIQTPDFSDYRRDQVKRPNAKNDSADERAAFTYLMVGGAAVTTAYVAKSLVSTFVS 130
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI E+ N LRDP
Sbjct: 131 SMSASADVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHRTAAEIAAEEAVNTGTLRDP 190
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q DS+RVK+P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 191 QHDSERVKNPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 250
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F ++G+++
Sbjct: 251 EVPHYEFPEDGLVV 264
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAH+DI+TPDFS YRRD + P+ K +R AFTY++ GG++V AKS+V+ F+S
Sbjct: 71 LAHTDIQTPDFSDYRRDQVKRPNAKNDSADERAAFTYLMVGGAAVTTAYVAKSLVSTFVS 130
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 131 SMSASADVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHR 171
>gi|157137761|ref|XP_001657169.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Aedes
aegypti]
gi|403182596|gb|EJY57498.1| AAEL003675-PB [Aedes aegypti]
Length = 240
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/194 (67%), Positives = 158/194 (81%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAH+DI+TPDFS YRRD + P+ K +R AFTY++ GG++V AKS+V+ F+S
Sbjct: 45 LAHTDIQTPDFSDYRRDQVKRPNAKNDSADERAAFTYLMVGGAAVTTAYVAKSLVSTFVS 104
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI E+ N LRDP
Sbjct: 105 SMSASADVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHRTAAEIAAEEAVNTGTLRDP 164
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q DS+RVK+P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 165 QHDSERVKNPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 224
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F ++G+++
Sbjct: 225 EVPHYEFPEDGLVV 238
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPD-KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAH+DI+TPDFS YRRD + P+ K +R AFTY++ GG++V AKS+V+ F+S
Sbjct: 45 LAHTDIQTPDFSDYRRDQVKRPNAKNDSADERAAFTYLMVGGAAVTTAYVAKSLVSTFVS 104
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 105 SMSASADVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHR 145
>gi|209737538|gb|ACI69638.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Salmo salar]
gi|223646876|gb|ACN10196.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Salmo salar]
gi|223672737|gb|ACN12550.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Salmo salar]
Length = 273
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR D + RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELIDPKKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR++KEI E+ ++++LRD
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHRSEKEIAAEEAVDMAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVANPKWIIVIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE +I
Sbjct: 257 LEVPYYEFPDEDTVI 271
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR D + RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELIDPKKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHR 178
>gi|225703406|gb|ACO07549.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Oncorhynchus mykiss]
Length = 273
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 154/195 (78%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR D + RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELLDPKKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR++KEI E+ ++++LRD
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHRSEKEIAAEEAVDMAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVANPKWIIVIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE +I
Sbjct: 257 LEVPFYEFPDEDTVI 271
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR D + RK F+Y++ G ++VVG+ AK+V QFI
Sbjct: 77 FAHTDIKVPDFSDYRRPELLDPKKSSQESSESRKTFSYLVTGATAVVGVYTAKTVATQFI 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IEV L IPEG+++TFKWRGKPLFIRHR
Sbjct: 137 SSMSASADVLAMSKIEVKLGEIPEGKNMTFKWRGKPLFIRHR 178
>gi|410908215|ref|XP_003967586.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Takifugu rubripes]
Length = 208
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YRR D N R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 12 LAHTDIKLPDFSDYRRPEVIDANKSSKDSSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 71
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHRT+KEI E+ N+ +LRD
Sbjct: 72 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHRTEKEIAAEEAVNLGELRD 131
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W++++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 132 PQHDKDRVLNPRWVIVLGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 191
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ +I
Sbjct: 192 LEVPFYEFPDDDTVI 206
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DI+ PDFS YRR D N R+AF+Y++ G ++VVG+ AK+VV QF+
Sbjct: 12 LAHTDIKLPDFSDYRRPEVIDANKSSKDSSDGRRAFSYLLTGATTVVGVYAAKTVVTQFV 71
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 72 SSMSASADVLALSKIEIKLGDIPEGKNMTFKWRGKPLFVRHR 113
>gi|193795733|gb|ACF21937.1| ubiquinol-cytochrome c reductase [Plutella xylostella]
gi|306847627|gb|ADN06277.1| Rieske iron-sulfur protein [Plutella xylostella]
Length = 272
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR--DRNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI PDF+ YRR +++P Q ET R FTY+IAGG + AKSVV F+
Sbjct: 76 FAHTDIAVPDFTAYRRKDNQDPTSKQAETSDGRHGFTYLIAGGGVMASAYAAKSVVTHFV 135
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSA+ADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHRT EI EQ + LRD
Sbjct: 136 SSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTAAEIAAEQAVAVESLRD 195
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+ R P WLV+IG+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 196 PQHDNQRTIQPEWLVVIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 255
Query: 178 MEVPPYQFGDEGILI 192
+EVPP F DEG L+
Sbjct: 256 LEVPPVAFMDEGTLV 270
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 86/139 (61%), Gaps = 20/139 (14%)
Query: 159 HGSHYDASGRIRKGPA-PTNMEVPPYQFGDEGILIRMLAHSDIRTPDFSKYRR--DRNPD 215
HGS ++R GP+ PT + AH+DI PDF+ YRR +++P
Sbjct: 54 HGSLPIQGLKVRSGPSVPTQVR---------------FAHTDIAVPDFTAYRRKDNQDPT 98
Query: 216 KGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIP 273
Q ET R FTY+IAGG + AKSVV F+SSMSA+ADVLA+A IE+ L IP
Sbjct: 99 SKQAETSDGRHGFTYLIAGGGVMASAYAAKSVVTHFVSSMSAAADVLALAKIEIKLAEIP 158
Query: 274 EGQSVTFKWRGKPLFIRHR 292
EG+SVTFKWRGKPLFIRHR
Sbjct: 159 EGKSVTFKWRGKPLFIRHR 177
>gi|239799432|dbj|BAH70636.1| hypothetical protein [Acyrthosiphon pisum]
Length = 262
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 157/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
L H+D + PD++ YRR+ ++P +T R AFTYM+ G + M CAK++V++F+
Sbjct: 66 LVHTDFKIPDYTDYRRNSVKDPSASNRDTYENRNAFTYMVLGTAVTGTMFCAKAIVHKFV 125
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SM+ +ADVLA+A+IEV+LN IPEG++ T KWRGKPLF+RHRT EI+TEQNT++++LRD
Sbjct: 126 LSMAPAADVLALASIEVNLNDIPEGKNATIKWRGKPLFVRHRTTAEIETEQNTSLAELRD 185
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ DS RV+ P WLVI+G+CTHLGCVPIANAGDWGGYYCPCHGSHYDA+GRI KGPAPTN
Sbjct: 186 PEDDSVRVQKPEWLVIVGVCTHLGCVPIANAGDWGGYYCPCHGSHYDAAGRICKGPAPTN 245
Query: 178 MEVPPYQFGDEGILI 192
MEVPPY+F ++ L
Sbjct: 246 MEVPPYKFINDNTLF 260
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
L H+D + PD++ YRR+ ++P +T R AFTYM+ G + M CAK++V++F+
Sbjct: 66 LVHTDFKIPDYTDYRRNSVKDPSASNRDTYENRNAFTYMVLGTAVTGTMFCAKAIVHKFV 125
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SM+ +ADVLA+A+IEV+LN IPEG++ T KWRGKPLF+RHR
Sbjct: 126 LSMAPAADVLALASIEVNLNDIPEGKNATIKWRGKPLFVRHR 167
>gi|195034480|ref|XP_001988905.1| GH10320 [Drosophila grimshawi]
gi|193904905|gb|EDW03772.1| GH10320 [Drosophila grimshawi]
Length = 230
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 150/193 (77%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AHSD++ PDFS YRRD D + + +RKAF+YM+ G +V G+ AK +VN F+ S
Sbjct: 36 AHSDLQVPDFSPYRRDSVKDVRRRNESAEERKAFSYMLVGAGAVGGVYAAKGLVNTFLGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHRT EI+TE+ S LRDP+
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHRTASEIETERGVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 TDDQRVIKPEWLVVIGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG LI
Sbjct: 216 VPTHEFPDEGTLI 228
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AHSD++ PDFS YRRD D + + +RKAF+YM+ G +V G+ AK +VN F+ S
Sbjct: 36 AHSDLQVPDFSPYRRDSVKDVRRRNESAEERKAFSYMLVGAGAVGGVYAAKGLVNTFLGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHR 135
>gi|308321490|gb|ADO27896.1| mitochondrial cytochrome b-c1 complex subunit rieske [Ictalurus
furcatus]
Length = 272
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 158/195 (81%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DIR PDFS YRR +P K +E+ R+ F+Y++ G ++VVG+ AK+ V QF+
Sbjct: 76 FAHTDIRVPDFSDYRRPEVSDPKKSSQESADARRVFSYLVTGSTAVVGVYTAKTAVTQFV 135
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLA++ +E+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI E ++SQLRD
Sbjct: 136 SSMSASADVLALSKVEIKLSDIPEGRNMVFKWRGKPLFVRHRTEKEIAAEAEVDLSQLRD 195
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D DRV+ PSW+++IG+CT+LGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 196 PEHDLDRVQKPSWIIVIGVCTYLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 255
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE ++
Sbjct: 256 LEVPYYEFPDEDTVV 270
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 78/102 (76%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DIR PDFS YRR +P K +E+ R+ F+Y++ G ++VVG+ AK+ V QF+
Sbjct: 76 FAHTDIRVPDFSDYRRPEVSDPKKSSQESADARRVFSYLVTGSTAVVGVYTAKTAVTQFV 135
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ +E+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 136 SSMSASADVLALSKVEIKLSDIPEGRNMVFKWRGKPLFVRHR 177
>gi|195433899|ref|XP_002064944.1| GK14939 [Drosophila willistoni]
gi|194161029|gb|EDW75930.1| GK14939 [Drosophila willistoni]
Length = 221
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 151/193 (78%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEET---QRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRRD D+ + T +RKAF+Y++ G +V AK +VN F+ S
Sbjct: 27 AHTDLQVPDFSAYRRDSVKDERRRNTTSEERKAFSYLLVGAGAVGSAYAAKGLVNAFVGS 86
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L+ I EG+SVTFKWRGKPLFIRHRT EID+E+N S LRDP+
Sbjct: 87 MSASADVLAMAKIEIKLSDIAEGKSVTFKWRGKPLFIRHRTAAEIDSERNVPTSTLRDPE 146
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 147 TDDQRVIKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 206
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG L+
Sbjct: 207 VPTHEFPDEGTLV 219
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEET---QRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRRD D+ + T +RKAF+Y++ G +V AK +VN F+ S
Sbjct: 27 AHTDLQVPDFSAYRRDSVKDERRRNTTSEERKAFSYLLVGAGAVGSAYAAKGLVNAFVGS 86
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L+ I EG+SVTFKWRGKPLFIRHR
Sbjct: 87 MSASADVLAMAKIEIKLSDIAEGKSVTFKWRGKPLFIRHR 126
>gi|348545418|ref|XP_003460177.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Oreochromis niloticus]
Length = 273
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 159/195 (81%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI PDFS YRR +P+K +++ R+ F+Y++ G ++VV + AK+VV QF+
Sbjct: 77 FAHTDITVPDFSDYRRPEVLDPNKSSQDSSESRRTFSYLVTGATAVVSVYAAKTVVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHRT+KEI TE ++++LRD
Sbjct: 137 SSMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTEKEIATEAAVSLTELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV PSW++++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVISPSWVIVLGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ +I
Sbjct: 257 LEVPYYEFPDDNTVI 271
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI PDFS YRR +P+K +++ R+ F+Y++ G ++VV + AK+VV QF+
Sbjct: 77 FAHTDITVPDFSDYRRPEVLDPNKSSQDSSESRRTFSYLVTGATAVVSVYAAKTVVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 178
>gi|225707078|gb|ACO09385.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Osmerus mordax]
Length = 273
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 123/190 (64%), Positives = 155/190 (81%), Gaps = 4/190 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI+ PDFS YRR ++P +E+ R+ F+YM+ G S+VG+ AK+VV QF+S
Sbjct: 78 AHTDIKIPDFSDYRRPDVQDPKTSSQESSEARRTFSYMVTGAFSIVGVYAAKTVVTQFVS 137
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA++ IEV L IPEG++VTFKWRGKPLF+RHRT+KEI E ++S+LRDP
Sbjct: 138 SMSASADVLALSKIEVKLGDIPEGKNVTFKWRGKPLFVRHRTEKEIAAEAAVDMSELRDP 197
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D++RV P W+++IG+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 198 QHDTERVTKPEWVIVIGVCTHLGCVPIANSGDYGGYYCPCHGSHYDASGRIRKGPAPLNL 257
Query: 179 EVPPYQFGDE 188
EVP Y+F DE
Sbjct: 258 EVPYYEFLDE 267
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI+ PDFS YRR ++P +E+ R+ F+YM+ G S+VG+ AK+VV QF+S
Sbjct: 78 AHTDIKIPDFSDYRRPDVQDPKTSSQESSEARRTFSYMVTGAFSIVGVYAAKTVVTQFVS 137
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA++ IEV L IPEG++VTFKWRGKPLF+RHR
Sbjct: 138 SMSASADVLALSKIEVKLGDIPEGKNVTFKWRGKPLFVRHR 178
>gi|432851117|ref|XP_004066864.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Oryzias latipes]
Length = 273
Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 158/195 (81%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR +P K E+ R+AF+Y++ G ++VV + AK+VV QF+
Sbjct: 77 FAHTDIKVPDFSDYRRPEVLDPHKPSTESSESRRAFSYLLTGATAVVSVYAAKTVVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHRT+KEI E+ ++++LRD
Sbjct: 137 SSMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTEKEISAEEAVSLAELRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV P W+++IG+CTHLGCVPI+NAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQEDKDRVIKPKWVIVIGVCTHLGCVPISNAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F D+ ++
Sbjct: 257 LEVPYYEFPDDDTVV 271
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 79/102 (77%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR +P K E+ R+AF+Y++ G ++VV + AK+VV QF+
Sbjct: 77 FAHTDIKVPDFSDYRRPEVLDPHKPSTESSESRRAFSYLLTGATAVVSVYAAKTVVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 178
>gi|195114648|ref|XP_002001879.1| GI17080 [Drosophila mojavensis]
gi|193912454|gb|EDW11321.1| GI17080 [Drosophila mojavensis]
Length = 227
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 152/193 (78%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDF+ YRRD D + + +RKAF+Y++ G +V G+ AK +VN F+ S
Sbjct: 33 AHTDLQVPDFTAYRRDSVKDSRRRNESAEERKAFSYLLVGAGAVGGVYAAKGMVNAFVGS 92
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L+ I EG+SVTFKWRGKPLFIRHRT EI+TE++ SQLRDP+
Sbjct: 93 MSASADVLAMAKIEIKLSDIAEGKSVTFKWRGKPLFIRHRTPAEIETERSVPTSQLRDPE 152
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 153 TDDQRVVKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 212
Query: 180 VPPYQFGDEGILI 192
VP ++F DE L+
Sbjct: 213 VPTHEFPDESTLV 225
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDF+ YRRD D + + +RKAF+Y++ G +V G+ AK +VN F+ S
Sbjct: 33 AHTDLQVPDFTAYRRDSVKDSRRRNESAEERKAFSYLLVGAGAVGGVYAAKGMVNAFVGS 92
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L+ I EG+SVTFKWRGKPLFIRHR
Sbjct: 93 MSASADVLAMAKIEIKLSDIAEGKSVTFKWRGKPLFIRHR 132
>gi|164448652|ref|NP_001106738.1| ubiquinol-cytochrome c reductase [Bombyx mori]
gi|98990259|gb|ABF60225.1| ubiquinol-cytochrome c reductase [Bombyx mori]
Length = 271
Score = 276 bits (706), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI PDFS YRR ++P ET +R++FTY+IAG SV G AKSVV F+
Sbjct: 75 FAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIAGAGSVAGAYAAKSVVTHFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSA+ADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHRT EI TE+ + LRD
Sbjct: 135 SSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHRTADEISTEKAVPVDTLRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D ++P WLV+IG+CTHLGCVP+AN G++GGYYCPCHGSHYDASG IRKGPAP N
Sbjct: 195 PQHDDQHTQNPKWLVVIGVCTHLGCVPVANVGEFGGYYCPCHGSHYDASGGIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+EVPP+ F DEG+L+
Sbjct: 255 LEVPPHTFMDEGLLV 269
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI PDFS YRR ++P ET +R++FTY+IAG SV G AKSVV F+
Sbjct: 75 FAHTDISYPDFSAYRRKETQDPTSKANETIDERQSFTYLIAGAGSVAGAYAAKSVVTHFV 134
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSA+ADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 135 SSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLFIRHR 176
>gi|321477681|gb|EFX88639.1| hypothetical protein DAPPUDRAFT_304712 [Daphnia pulex]
Length = 273
Score = 276 bits (705), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 123/195 (63%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+D+ PDFS YRR D + D R+ F+Y+I G +V G AK+VV +F+
Sbjct: 77 FAHTDVSIPDFSAYRRSNLKDSSADNKSSAPSRQGFSYLIVGSGAVGGAYAAKTVVGEFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SMSASADVLA+A IEV LN IPEG++VTFKWRGKPLFIRHRT +EIDTE ++S LRD
Sbjct: 137 GSMSASADVLALAKIEVKLNDIPEGKNVTFKWRGKPLFIRHRTAEEIDTESKVDMSTLRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ DSDR + P WLV++G+CTHLGCVPIAN+G++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQLDSDRAQRPEWLVLLGVCTHLGCVPIANSGEFGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+E+P + F DE L+
Sbjct: 257 LEIPIHTFVDENTLV 271
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+D+ PDFS YRR D + D R+ F+Y+I G +V G AK+VV +F+
Sbjct: 77 FAHTDVSIPDFSAYRRSNLKDSSADNKSSAPSRQGFSYLIVGSGAVGGAYAAKTVVGEFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IEV LN IPEG++VTFKWRGKPLFIRHR
Sbjct: 137 GSMSASADVLALAKIEVKLNDIPEGKNVTFKWRGKPLFIRHR 178
>gi|156371186|ref|XP_001628646.1| predicted protein [Nematostella vectensis]
gi|156215628|gb|EDO36583.1| predicted protein [Nematostella vectensis]
Length = 260
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 151/194 (77%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+ PDF YRR + G+ ET R+AFTY++ G V G+ K+++ F+S
Sbjct: 65 FSHTDVNMPDFGDYRRPSTSEVGKTETTEIGRRAFTYLVVAGMGVTGVHAGKNLLVNFLS 124
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLAMA IEVDLN IPEG+++ FKWRGKPLF+RHRT EI EQN +++ LR P
Sbjct: 125 TMSASADVLAMAKIEVDLNTIPEGKNMVFKWRGKPLFVRHRTADEISEEQNVDVASLRHP 184
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+AD+DRVKD WLV+IG+CTHLGCVPI+NAG++GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 185 EADADRVKDDKWLVLIGVCTHLGCVPISNAGEYGGYYCPCHGSHYDASGRIRKGPAPLNL 244
Query: 179 EVPPYQFGDEGILI 192
EVP + F DE L+
Sbjct: 245 EVPEHSFLDESTLV 258
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+ PDF YRR + G+ ET R+AFTY++ G V G+ K+++ F+S
Sbjct: 65 FSHTDVNMPDFGDYRRPSTSEVGKTETTEIGRRAFTYLVVAGMGVTGVHAGKNLLVNFLS 124
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLAMA IEVDLN IPEG+++ FKWRGKPLF+RHR
Sbjct: 125 TMSASADVLAMAKIEVDLNTIPEGKNMVFKWRGKPLFVRHR 165
>gi|54036555|sp|Q69BJ7.1|UCRI_SAISC RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939362|gb|AAR32730.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Saimiri sciureus]
Length = 274
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 259 EVPTYEFLSDDMVV 272
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|54036556|sp|Q69BJ8.1|UCRI_LAGLA RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939366|gb|AAR32731.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Lagothrix lagotricha]
Length = 274
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 154/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 259 EVPTYEFTGDDMVIV 273
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|403292978|ref|XP_003937503.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Saimiri boliviensis boliviensis]
Length = 227
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 32 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 91
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 92 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 151
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 152 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 211
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 212 EVPTYEFLSDDMVV 225
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 32 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 91
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 92 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 132
>gi|194762213|ref|XP_001963250.1| GF14036 [Drosophila ananassae]
gi|190616947|gb|EDV32471.1| GF14036 [Drosophila ananassae]
Length = 230
Score = 273 bits (699), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 149/193 (77%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D++ PDF+ YRRD D + + +RKAF+Y++ G +V AK +VN F+ S
Sbjct: 36 GHTDLQVPDFTDYRRDSVKDGRRRNETAEERKAFSYLMVGAGAVGSAYAAKGLVNAFVGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EIDTE+ + LRDP+
Sbjct: 96 MSASADVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAGEIDTERQVPTASLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 TDDQRVIKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG L+
Sbjct: 216 VPTHEFPDEGTLV 228
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 78/111 (70%), Gaps = 7/111 (6%)
Query: 189 GILIRMLA----HSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVC 241
G+ I +A H+D++ PDF+ YRRD D + + +RKAF+Y++ G +V
Sbjct: 25 GVAINSMANRQGHTDLQVPDFTDYRRDSVKDGRRRNETAEERKAFSYLMVGAGAVGSAYA 84
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AK +VN F+ SMSASADVLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 85 AKGLVNAFVGSMSASADVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|288856315|ref|NP_001165810.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Nasonia
vitripennis]
Length = 275
Score = 273 bits (698), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 155/195 (79%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DIR PDF++YR+D +NP E+ R+A +Y++A + V+G AKS V +
Sbjct: 80 LAHTDIRVPDFNEYRKDEVKNPSVRSRESAPSRQAVSYVVAASAGVIGAYTAKSFVIDLL 139
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S+M+ASADVLAMA IEV L+ IPEG+SV FKWRGKPLFIRHRT EI+ E +++ LRD
Sbjct: 140 STMAASADVLAMAKIEVKLDAIPEGKSVVFKWRGKPLFIRHRTAAEIERENAVDVASLRD 199
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+DRV+ P WL+++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 200 PQKDTDRVQQPEWLIVVGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLN 259
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F ++ +++
Sbjct: 260 LEVPAYEFQNDIVVV 274
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+DIR PDF++YR+D +NP E+ R+A +Y++A + V+G AKS V +
Sbjct: 80 LAHTDIRVPDFNEYRKDEVKNPSVRSRESAPSRQAVSYVVAASAGVIGAYTAKSFVIDLL 139
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S+M+ASADVLAMA IEV L+ IPEG+SV FKWRGKPLFIRHR
Sbjct: 140 STMAASADVLAMAKIEVKLDAIPEGKSVVFKWRGKPLFIRHR 181
>gi|39939332|gb|AAR32720.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Alouatta belzebul]
Length = 202
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 187 EVPTYEFTSDDMVI 200
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|297704312|ref|XP_002829052.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Pongo abelii]
gi|54036561|sp|Q69BK3.1|UCRI_PONPY RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939374|gb|AAR32733.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Pongo pygmaeus]
Length = 274
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS+YRR D + RK F+Y++ G ++V AK+VV QF+S
Sbjct: 79 SHTDVRVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNVVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPIYEFTSDDMVI 272
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS+YRR D + RK F+Y++ G ++V AK+VV QF+S
Sbjct: 79 SHTDVRVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNVVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|39939334|gb|AAR32721.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Pithecia irrorata]
Length = 202
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D+ + RK F+Y++ ++V AK++V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTASSRESSDARKGFSYLVTATTTVGVAYAAKNIVTQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 67 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F E ++I
Sbjct: 187 EVPTYEFTSEDMVI 200
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D+ + RK F+Y++ ++V AK++V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTASSRESSDARKGFSYLVTATTTVGVAYAAKNIVTQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|410983363|ref|XP_003998010.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Felis catus]
Length = 274
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRTEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIEQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 259 EVPSYEFTGDDMVIV 273
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRTEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|39939336|gb|AAR32722.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Callicebus donacophilus]
Length = 202
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYMVTATTAVGVAYAAKSIVTQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 67 SMSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 187 EVPTYEFTSDDMVI 200
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QF+S
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYMVTATTAVGVAYAAKSIVTQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|431914085|gb|ELK15344.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Pteropus
alecto]
Length = 274
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 156/195 (80%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDK---GQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS YRR D +E T+ RK F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDVKVPDFSDYRRAEVSDSTASSRESTEARKGFSYLITATTTVAVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWIILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 259 EVPTYEFTGDDLVIV 273
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDK---GQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS YRR D +E T+ RK F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDVKVPDFSDYRRAEVSDSTASSRESTEARKGFSYLITATTTVAVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|54036557|sp|Q69BJ9.1|UCRI_AOTAZ RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939370|gb|AAR32732.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Aotus azarai]
Length = 274
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDLVI 272
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|57036706|ref|XP_533711.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
[Canis lupus familiaris]
Length = 274
Score = 271 bits (694), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIEQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 259 EVPSYEFTGDDMVIV 273
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|351707089|gb|EHB10008.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial
[Heterocephalus glaber]
Length = 274
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS YRR D + RKAF+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVRVPDFSDYRRTEVLDSTKSSKESSEARKAFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L IPEG+S+ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLADIPEGKSMAFKWRGKPLFVRHRTQKEIEQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+V+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVVLIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y F + +LI
Sbjct: 259 EVPTYHFPSDDLLI 272
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS YRR D + RKAF+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVRVPDFSDYRRTEVLDSTKSSKESSEARKAFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L IPEG+S+ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLADIPEGKSMAFKWRGKPLFVRHR 179
>gi|296233443|ref|XP_002762014.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Callithrix jacchus]
Length = 265
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDF+ YRR DK + + RK F+Y++ ++V AK +V QF+S
Sbjct: 70 SHTDIKVPDFADYRRSEVLDKAKSSRESSDARKGFSYLVTAATAVGVTYAAKGIVTQFVS 129
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 130 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 189
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 190 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 249
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 250 EVPTYEFTGDDMVVV 264
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDF+ YRR DK + + RK F+Y++ ++V AK +V QF+S
Sbjct: 70 SHTDIKVPDFADYRRSEVLDKAKSSRESSDARKGFSYLVTAATAVGVTYAAKGIVTQFVS 129
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 130 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 170
>gi|194854202|ref|XP_001968304.1| GG24583 [Drosophila erecta]
gi|190660171|gb|EDV57363.1| GG24583 [Drosophila erecta]
Length = 230
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRRD D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRDSVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F EG+L+
Sbjct: 216 VPTHEFPSEGLLV 228
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRRD D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRDSVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|195350377|ref|XP_002041717.1| GM16602 [Drosophila sechellia]
gi|194123490|gb|EDW45533.1| GM16602 [Drosophila sechellia]
Length = 230
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRRD D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F +EG+L+
Sbjct: 216 VPTHEFPNEGLLV 228
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRRD D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|443696156|gb|ELT96936.1| hypothetical protein CAPTEDRAFT_224546 [Capitella teleta]
Length = 274
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 116/193 (60%), Positives = 153/193 (79%), Gaps = 2/193 (1%)
Query: 2 LAHSDIRTPDFSKYRR--DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
LAH+D++ PDF YR+ D + + RKAFTY++ G+ + K+V+ QF+SS
Sbjct: 80 LAHTDLQVPDFDYYRKAPKEADDSIEGDNNRKAFTYLMLAGAGAPALYGTKTVITQFVSS 139
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLA+A IE++L+ IPEG++VTFKWRGKPLF+RHRT +E+D E ++ LRDPQ
Sbjct: 140 MSASADVLALAKIEINLDEIPEGKNVTFKWRGKPLFVRHRTAEEVDKEAAVDVGSLRDPQ 199
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DRVK+P WL+I+G+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIR GPAP N+E
Sbjct: 200 HDTDRVKNPEWLIILGVCTHLGCVPMANAGDYGGYYCPCHGSHYDASGRIRAGPAPLNLE 259
Query: 180 VPPYQFGDEGILI 192
VP Y+F ++ +L+
Sbjct: 260 VPYYEFVEDNLLV 272
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/100 (54%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
Query: 195 LAHSDIRTPDFSKYRR--DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
LAH+D++ PDF YR+ D + + RKAFTY++ G+ + K+V+ QF+SS
Sbjct: 80 LAHTDLQVPDFDYYRKAPKEADDSIEGDNNRKAFTYLMLAGAGAPALYGTKTVITQFVSS 139
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLA+A IE++L+ IPEG++VTFKWRGKPLF+RHR
Sbjct: 140 MSASADVLALAKIEINLDEIPEGKNVTFKWRGKPLFVRHR 179
>gi|39939330|gb|AAR32719.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Callithrix jacchus]
Length = 202
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDF+ YRR DK + + RK F+Y++ ++V AK +V QF+S
Sbjct: 7 SHTDIKVPDFADYRRSEVLDKAKSSRESSDARKGFSYLVTAATAVGVTYAAKGIVTQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 187 EVPTYEFTGDDMVVV 201
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDF+ YRR DK + + RK F+Y++ ++V AK +V QF+S
Sbjct: 7 SHTDIKVPDFADYRRSEVLDKAKSSRESSDARKGFSYLVTAATAVGVTYAAKGIVTQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|311257294|ref|XP_003127050.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Sus scrofa]
Length = 274
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D + RK F+Y+I ++V AK+ V+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDSTKSSKESSDARKGFSYLITATTTVGVAYAAKNAVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDLVI 272
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D + RK F+Y+I ++V AK+ V+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDSTKSSKESSDARKGFSYLITATTTVGVAYAAKNAVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|355703378|gb|EHH29869.1| Putative cytochrome b-c1 complex subunit Rieske-like protein 1
[Macaca mulatta]
gi|384949238|gb|AFI38224.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Macaca
mulatta]
Length = 274
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+YM+ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYMVTAVTTVSVAYAAKNVVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GG+YCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGFYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+YM+ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYMVTAVTTVSVAYAAKNVVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|38674607|gb|AAR26321.1| Rieske iron sulfur protein/complex III subunit 9 precursor [Eulemur
fulvus]
Length = 255
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 154/194 (79%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD--KGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS YRR D K +E+ RK F+Y+I ++V AK+VV+QF+S
Sbjct: 60 SHTDVRVPDFSDYRRTEVLDGTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 119
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 120 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 179
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 180 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 239
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 240 EVPSYEFTSDDMVI 253
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 75/101 (74%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD--KGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS YRR D K +E+ RK F+Y+I ++V AK+VV+QF+S
Sbjct: 60 SHTDVRVPDFSDYRRTEVLDGTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 119
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 120 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 160
>gi|54036559|sp|Q69BK1.1|UCRI_CERAE RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939382|gb|AAR32735.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Chlorocebus aethiops]
Length = 274
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVPPY+F GD+ +++
Sbjct: 259 EVPPYEFTGDDVVVV 273
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|196004272|ref|XP_002112003.1| hypothetical protein TRIADDRAFT_24746 [Trichoplax adhaerens]
gi|190585902|gb|EDV25970.1| hypothetical protein TRIADDRAFT_24746, partial [Trichoplax
adhaerens]
Length = 201
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 148/193 (76%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRR--DRNPDKGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
+H+DI P F YRR + NPD R+AFTYM+ G VV AK+VV +S+
Sbjct: 7 SHTDITVPSFDNYRRAANSNPDTSNTNPDGRRAFTYMMVAGGGVVAAHAAKNVVTDLVST 66
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IEVDL IPEG+S FKWRGKPLFIRHRT EI+ EQN N+ +LRD +
Sbjct: 67 MSASADVLAMAQIEVDLTTIPEGKSAAFKWRGKPLFIRHRTATEIEREQNVNLDELRDRE 126
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DRVKDPSWLV+IG+CTHLGCVPIA+AG++GGY+CPCHGSHYDASGRIRKGPAP N+E
Sbjct: 127 HDNDRVKDPSWLVLIGVCTHLGCVPIADAGEFGGYFCPCHGSHYDASGRIRKGPAPLNLE 186
Query: 180 VPPYQFGDEGILI 192
+P Y+F + L+
Sbjct: 187 IPSYKFATDTTLL 199
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRR--DRNPDKGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+H+DI P F YRR + NPD R+AFTYM+ G VV AK+VV +S+
Sbjct: 7 SHTDITVPSFDNYRRAANSNPDTSNTNPDGRRAFTYMMVAGGGVVAAHAAKNVVTDLVST 66
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IEVDL IPEG+S FKWRGKPLFIRHR
Sbjct: 67 MSASADVLAMAQIEVDLTTIPEGKSAAFKWRGKPLFIRHR 106
>gi|355727834|gb|AES09325.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Mustela putorius furo]
Length = 258
Score = 270 bits (691), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 153/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 63 SHTDVRVPDFSDYRRAEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 122
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI+ E +SQLRDP
Sbjct: 123 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIEQEAAVEVSQLRDP 182
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 183 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 242
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 243 EVPSYEFTGDDMVVV 257
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS YRR D + RK F+Y+I +S+ AK+VV+QF+S
Sbjct: 63 SHTDVRVPDFSDYRRAEVLDGTKSSKESSEARKGFSYLITATTSIGVAYAAKNVVSQFVS 122
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 123 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 163
>gi|391226631|gb|AFM38203.1| Rieske Fe-S protein 1 [Anasa tristis]
Length = 270
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 127/195 (65%), Positives = 153/195 (78%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNP--DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+D++ PDFS YRR ++P D E RK F+Y+I G V G AK++V Q+I
Sbjct: 74 FAHTDLKVPDFSPYRRSAVQSPTADSQSSEESRKTFSYVIVGAGGVAGAYAAKTLVTQYI 133
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+SMSASADVLAMA IEV L+ IPEG+S+TFKWRGKPLFIRHRT +EI E+ T +S+LRD
Sbjct: 134 TSMSASADVLAMAKIEVKLSDIPEGKSMTFKWRGKPLFIRHRTGEEISKERQTPVSELRD 193
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D DRV+ WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYD SGRIRKGPAP N
Sbjct: 194 PERDEDRVQKAEWLVLIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDNSGRIRKGPAPLN 253
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F DE L+
Sbjct: 254 LEVPPYEFMDESTLV 268
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNP--DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+D++ PDFS YRR ++P D E RK F+Y+I G V G AK++V Q+I
Sbjct: 74 FAHTDLKVPDFSPYRRSAVQSPTADSQSSEESRKTFSYVIVGAGGVAGAYAAKTLVTQYI 133
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SMSASADVLAMA IEV L+ IPEG+S+TFKWRGKPLFIRHR
Sbjct: 134 TSMSASADVLAMAKIEVKLSDIPEGKSMTFKWRGKPLFIRHR 175
>gi|417398204|gb|JAA46135.1| Putative cytochrome b-c1 complex subunit rieske mitochondrial
[Desmodus rotundus]
Length = 274
Score = 270 bits (690), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVKVPDFSDYRRAEVLDSTKSSRESAEARKGFSYLVTAATTVAFAYTAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KE++ E ++SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEVEQEAAVDVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + I++
Sbjct: 259 EVPSYEFPSDDIVV 272
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVKVPDFSDYRRAEVLDSTKSSRESAEARKGFSYLVTAATTVAFAYTAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|333755436|gb|AEF97527.1| VisGreen-RFeSP [synthetic construct]
Length = 499
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 305 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 364
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 365 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 424
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 425 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 484
Query: 180 VPPYQFGDEGILI 192
VP ++F +EG+L+
Sbjct: 485 VPTHEFPNEGLLV 497
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 305 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 364
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 365 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 404
>gi|195470523|ref|XP_002087556.1| RFeSP [Drosophila yakuba]
gi|194173657|gb|EDW87268.1| RFeSP [Drosophila yakuba]
Length = 230
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRESVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F +EG+L+
Sbjct: 216 VPTHEFPNEGLLV 228
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRESVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHR 135
>gi|24580896|ref|NP_722715.1| rieske iron-sulfur protein, isoform B [Drosophila melanogaster]
gi|442625211|ref|NP_001259876.1| rieske iron-sulfur protein, isoform D [Drosophila melanogaster]
gi|442625213|ref|NP_524748.2| rieske iron-sulfur protein, isoform E [Drosophila melanogaster]
gi|22945459|gb|AAF51354.3| rieske iron-sulfur protein, isoform B [Drosophila melanogaster]
gi|290491284|gb|ADD31621.1| SD14047p [Drosophila melanogaster]
gi|333755439|gb|AEF97529.1| RFeSP [synthetic construct]
gi|333755442|gb|AEF97531.1| RFeSP [synthetic construct]
gi|440213137|gb|AGB92413.1| rieske iron-sulfur protein, isoform D [Drosophila melanogaster]
gi|440213138|gb|AAF51353.2| rieske iron-sulfur protein, isoform E [Drosophila melanogaster]
Length = 230
Score = 270 bits (689), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 153/193 (79%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F +EG+L+
Sbjct: 216 VPTHEFPNEGLLV 228
Score = 110 bits (274), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|427786823|gb|JAA58863.1| Putative cytochrome b-c1 complex subunit rieske mitochondrial
[Rhipicephalus pulchellus]
Length = 273
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 117/195 (60%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQR----KAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+AH+DI+ PDFS YRR N D K TY+I +V G AKS+V +F+
Sbjct: 77 MAHTDIKVPDFSAYRRKSNLDPASSSRDSEVSSKVQTYLILSAGAVGGTYAAKSLVTKFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+++ASADVLAMA IEV LN IPEG++ TFKWRGKPLF+RHRT +EI E++ ++S LRD
Sbjct: 137 MALAASADVLAMAKIEVKLNEIPEGKNATFKWRGKPLFVRHRTSEEISREESVDVSTLRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ+D DR + P WL+++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQSDKDRTQKPEWLIVLGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F ++
Sbjct: 257 LEVPPYEFTSNSTVL 271
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 71/105 (67%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRRDRNPDKGQEETQR----KAFTYMIAGGSSVVGMVCAKSVVN 247
+RM AH+DI+ PDFS YRR N D K TY+I +V G AKS+V
Sbjct: 75 VRM-AHTDIKVPDFSAYRRKSNLDPASSSRDSEVSSKVQTYLILSAGAVGGTYAAKSLVT 133
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F+ +++ASADVLAMA IEV LN IPEG++ TFKWRGKPLF+RHR
Sbjct: 134 KFVMALAASADVLAMAKIEVKLNEIPEGKNATFKWRGKPLFVRHR 178
>gi|350414774|ref|XP_003490414.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Bombus impatiens]
Length = 246
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D++ PDF+ YR +D RK+FTY++ + V + AK+VV+ +
Sbjct: 50 LAHTDVQWPDFTDYRHNAVKDPKVSSKHSAASRKSFTYLVTATTGVCAVYSAKTVVHNLV 109
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+SMSA+ DVLA+A IEV L+ IPEG++ FKWRGKPLF+RHR+QKEID E +++ LRD
Sbjct: 110 ASMSAAGDVLALAKIEVKLDNIPEGKNAVFKWRGKPLFVRHRSQKEIDREAQVDVASLRD 169
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+DR +DP WLV++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 170 PQVDTDRTRDPKWLVVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 229
Query: 178 MEVPPYQFGDEGILI 192
+E+PPY+F + +L+
Sbjct: 230 LEIPPYEFVEGNVLV 244
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+D++ PDF+ YR +D RK+FTY++ + V + AK+VV+
Sbjct: 48 RRLAHTDVQWPDFTDYRHNAVKDPKVSSKHSAASRKSFTYLVTATTGVCAVYSAKTVVHN 107
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++SMSA+ DVLA+A IEV L+ IPEG++ FKWRGKPLF+RHR
Sbjct: 108 LVASMSAAGDVLALAKIEVKLDNIPEGKNAVFKWRGKPLFVRHR 151
>gi|163644321|ref|NP_005994.2| cytochrome b-c1 complex subunit Rieske, mitochondrial [Homo
sapiens]
gi|143811471|sp|P47985.2|UCRI_HUMAN RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|5042402|gb|AAD38242.1|AC007786_1 UCRI_HUMAN [Homo sapiens]
Length = 274
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|45768728|gb|AAH67832.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Homo sapiens]
Length = 274
Score = 269 bits (687), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|194215244|ref|XP_001488802.2| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Equus caballus]
Length = 237
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D RK F+Y++ ++V AK+VV+QF+S
Sbjct: 42 SHTDIRVPDFSDYRRPEVLDSTKSSKASSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 101
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 102 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEMSQLRDP 161
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 162 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 221
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 222 EVPSYEFTGDDLVIV 236
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D RK F+Y++ ++V AK+VV+QF+S
Sbjct: 42 SHTDIRVPDFSDYRRPEVLDSTKSSKASSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 101
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 102 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 142
>gi|54036562|sp|Q69BK4.1|UCRI_GORGO RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|488299|gb|AAC41754.1| Rieske Fe-S protein [Homo sapiens]
gi|12653727|gb|AAH00649.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Homo sapiens]
gi|14603136|gb|AAH10035.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Homo sapiens]
gi|39939354|gb|AAR32728.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Gorilla gorilla]
gi|123981876|gb|ABM82767.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[synthetic construct]
gi|158255704|dbj|BAF83823.1| unnamed protein product [Homo sapiens]
gi|312151912|gb|ADQ32468.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[synthetic construct]
Length = 274
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|426388083|ref|XP_004060479.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 2 [Gorilla gorilla gorilla]
Length = 255
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 60 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 119
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 120 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 179
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 180 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 239
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 240 EVPTYEFTSDDMVI 253
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 60 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 119
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 120 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 160
>gi|13385168|ref|NP_079986.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Mus
musculus]
gi|52000877|sp|Q9CR68.1|UCRI_MOUSE RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|12834945|dbj|BAB23097.1| unnamed protein product [Mus musculus]
gi|12848766|dbj|BAB28081.1| unnamed protein product [Mus musculus]
gi|12852345|dbj|BAB29374.1| unnamed protein product [Mus musculus]
gi|18044191|gb|AAH19934.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Mus musculus]
gi|56205461|emb|CAI24872.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Mus musculus]
gi|74139813|dbj|BAE31751.1| unnamed protein product [Mus musculus]
gi|74214679|dbj|BAE31179.1| unnamed protein product [Mus musculus]
gi|148700439|gb|EDL32386.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1,
isoform CRA_b [Mus musculus]
Length = 274
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+
Sbjct: 78 FSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFV 137
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRD
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRD 197
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 198 PQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 257
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F + +++
Sbjct: 258 LEVPAYEFTSDDVVV 272
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+
Sbjct: 78 FSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFV 137
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|355755673|gb|EHH59420.1| Putative cytochrome b-c1 complex subunit Rieske-like protein 1
[Macaca fascicularis]
Length = 274
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QF+S
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVSVAYAAKNVVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 TMSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVVLSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GG+YCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGFYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QF+S
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVSVAYAAKNVVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 TMSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|349603768|gb|AEP99513.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial-like protein,
partial [Equus caballus]
Length = 204
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D RK F+Y++ ++V AK+VV+QF+S
Sbjct: 9 SHTDIRVPDFSDYRRPEVLDSTKSSKASSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 68
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 69 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEMSQLRDP 128
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 129 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 188
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 189 EVPSYEFTGDDLVIV 203
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D RK F+Y++ ++V AK+VV+QF+S
Sbjct: 9 SHTDIRVPDFSDYRRPEVLDSTKSSKASSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 68
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 69 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 109
>gi|332373642|gb|AEE61962.1| unknown [Dendroctonus ponderosae]
Length = 268
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI P+F YRR+ ++P + ET+ RK FTY++AGG + K++V FIS
Sbjct: 73 AHTDITVPNFDNYRRNSTKDPTRKASETEDTRKNFTYLLAGGLGAASVYGTKNIVTYFIS 132
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IEV L IPEG+SVTFKWRGKPLFIRHRT EI E+ + LRDP
Sbjct: 133 SMSASADVLALAKIEVKLGDIPEGKSVTFKWRGKPLFIRHRTADEIAAERAVPVESLRDP 192
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D+DR++ P WLV++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 193 QHDNDRIQKPEWLVVLGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 252
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F E L+
Sbjct: 253 EVPYYEFAAEDTLV 266
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/101 (59%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI P+F YRR+ ++P + ET+ RK FTY++AGG + K++V FIS
Sbjct: 73 AHTDITVPNFDNYRRNSTKDPTRKASETEDTRKNFTYLLAGGLGAASVYGTKNIVTYFIS 132
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IEV L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 133 SMSASADVLALAKIEVKLGDIPEGKSVTFKWRGKPLFIRHR 173
>gi|109099174|ref|XP_001101289.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
isoform 2 [Macaca mulatta]
Length = 274
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GG+YCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGFYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|426388081|ref|XP_004060478.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 1 [Gorilla gorilla gorilla]
Length = 286
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 91 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 150
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 151 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 210
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 211 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 270
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 271 EVPTYEFTSDDMVI 284
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 91 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 150
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 151 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 191
>gi|291409784|ref|XP_002721187.1| PREDICTED: Rieske iron sulfur protein/complex III subunit 9-like
[Oryctolagus cuniculus]
Length = 230
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEE----TQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS YRR+ D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 35 SHTDVKVPDFSDYRRNEVLDSTKSSRDSSEARKGFSYLVTATATVGVAYAAKNVVSQFVS 94
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 95 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVEVSQLRDP 154
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 155 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 214
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 215 EVPSYEFTSDDLVV 228
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEE----TQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS YRR+ D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 35 SHTDVKVPDFSDYRRNEVLDSTKSSRDSSEARKGFSYLVTATATVGVAYAAKNVVSQFVS 94
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 95 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 135
>gi|344289308|ref|XP_003416386.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Loxodonta africana]
Length = 274
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D + RK+F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRADVLDSTKSSKESSEARKSFSYLITAATTVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +S+LRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVEVSKLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RV+ P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR+GPAP N+
Sbjct: 199 QHDLERVQKPEWIILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRRGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP YQF +++
Sbjct: 259 EVPSYQFTSNDMVV 272
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D + RK+F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDIRVPDFSDYRRADVLDSTKSSKESSEARKSFSYLITAATTVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|397490578|ref|XP_003816278.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Pan paniscus]
gi|54036563|sp|Q69BK5.1|UCRI_PANTR RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|54036564|sp|Q69BK6.1|UCRI_PANPA RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939346|gb|AAR32726.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Pan paniscus]
gi|39939350|gb|AAR32727.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Pan troglodytes]
gi|410211634|gb|JAA03036.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Pan troglodytes]
gi|410294200|gb|JAA25700.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Pan troglodytes]
gi|410332119|gb|JAA35006.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Pan troglodytes]
Length = 274
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|297263804|ref|XP_002798865.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
[Macaca mulatta]
Length = 256
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 61 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 120
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 121 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 180
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GG+YCPCHGSHYDASGRIR GPAP N+
Sbjct: 181 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGFYCPCHGSHYDASGRIRLGPAPLNL 240
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 241 EVPPYEFTSDDMVV 254
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 61 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 120
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+MSASADVLAMA IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 121 TMSASADVLAMAKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 161
>gi|114676451|ref|XP_001148728.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
isoform 1 [Pan troglodytes]
Length = 274
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|410053609|ref|XP_003316294.2| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
isoform 2 [Pan troglodytes]
Length = 255
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 60 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 119
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 120 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 179
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 180 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 239
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 240 EVPTYEFTSDDMVI 253
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 60 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 119
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 120 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 160
>gi|426242165|ref|XP_004014945.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Ovis aries]
Length = 274
Score = 268 bits (684), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPSYEFTSDDMVI 272
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y+I ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|1351360|sp|P13272.3|UCRI_BOVIN RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|299558|gb|AAB26197.1| Rieske iron-sulfur [Bos taurus]
gi|94534880|gb|AAI15995.1| UQCRFS1 protein [Bos taurus]
gi|126920891|gb|AAI33621.1| UQCRFS1 protein [Bos taurus]
gi|126920969|gb|AAI33633.1| UQCRFS1 protein [Bos taurus]
gi|296478230|tpg|DAA20345.1| TPA: ubiquinol-cytochrome c reductase, Rieske iron-sulfur
polypeptide 1 [Bos taurus]
gi|440891651|gb|ELR45215.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Bos
grunniens mutus]
Length = 274
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPSYEFTSDDMVI 272
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|332023384|gb|EGI63629.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Acromyrmex
echinatior]
Length = 276
Score = 267 bits (683), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDF++YR+ D N RK TY+IA GSSV G+ AK +V+ +
Sbjct: 79 LAHTDIQWPDFTEYRQSETQDPNAKSRDSAPSRKGTTYLIAAGSSVAGVYGAKVLVHNLV 138
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+S +ADVLAM+ IE+ L+ IPEG+S FKWRGKPLF+RHR EI TE N+ LRD
Sbjct: 139 GMLSPTADVLAMSKIEIKLDNIPEGKSAIFKWRGKPLFVRHRIDSEIATENKVNVGSLRD 198
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ DS RVKDP WLVIIG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 199 PEEDSARVKDPKWLVIIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 258
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F + G ++
Sbjct: 259 LEVPPYEFTEGGSML 273
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+DI+ PDF++YR+ D N RK TY+IA GSSV G+ AK +V+
Sbjct: 77 RRLAHTDIQWPDFTEYRQSETQDPNAKSRDSAPSRKGTTYLIAAGSSVAGVYGAKVLVHN 136
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ +S +ADVLAM+ IE+ L+ IPEG+S FKWRGKPLF+RHR
Sbjct: 137 LVGMLSPTADVLAMSKIEIKLDNIPEGKSAIFKWRGKPLFVRHR 180
>gi|340715150|ref|XP_003396082.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Bombus terrestris]
Length = 246
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDF+ YR +D RK+FTY++ + V + AK+VV+ +
Sbjct: 50 LAHTDIQWPDFTDYRHKAVKDPKVPSKHSAASRKSFTYLVTATTGVCAVYSAKTVVHNLV 109
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+SMSA+ DVLA+A IEV L+ IPEG++ FKWRGKPLF+RHR+QKEID E +++ LRD
Sbjct: 110 ASMSAAGDVLALAKIEVKLDNIPEGKNAVFKWRGKPLFVRHRSQKEIDREAQVDVASLRD 169
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D+DR +DP WLV++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 170 PEVDTDRTRDPKWLVVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 229
Query: 178 MEVPPYQFGDEGILI 192
+E+PPY+F + +L+
Sbjct: 230 LEIPPYEFVEGNVLV 244
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 70/104 (67%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+DI+ PDF+ YR +D RK+FTY++ + V + AK+VV+
Sbjct: 48 RRLAHTDIQWPDFTDYRHKAVKDPKVPSKHSAASRKSFTYLVTATTGVCAVYSAKTVVHN 107
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++SMSA+ DVLA+A IEV L+ IPEG++ FKWRGKPLF+RHR
Sbjct: 108 LVASMSAAGDVLALAKIEVKLDNIPEGKNAVFKWRGKPLFVRHR 151
>gi|402904992|ref|XP_003915313.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Papio anubis]
Length = 274
Score = 267 bits (683), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLLTAVTTVGVAYAAKNAVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IGICTHLGCVPIANAGD+GG+YCPCHGSHYD SGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGFYCPCHGSHYDVSGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLLTAVTTVGVAYAAKNAVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHR 179
>gi|348561555|ref|XP_003466578.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Cavia porcellus]
Length = 274
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDF+ YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVRVPDFTDYRRAEVLDSTKSSKESSEARKGFSYLVTATATVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 259 EVPTYEFTSDDLVV 272
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDF+ YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDVRVPDFTDYRRAEVLDSTKSSKESSEARKGFSYLVTATATVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|39939342|gb|AAR32725.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Nycticebus coucang]
Length = 202
Score = 267 bits (682), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 7 SHTDVRVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEID E ISQLRDP
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIDQEAAVEISQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 187 EVPTYEFTSDDLVI 200
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 7 SHTDVRVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|395851858|ref|XP_003798467.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Otolemur garnettii]
Length = 274
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DIR PDFS YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDLVI 272
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DIR PDFS YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDIRVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|54036560|sp|Q69BK2.1|UCRI_THEGE RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939378|gb|AAR32734.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Theropithecus gelada]
Length = 274
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IGICTHLGCVPIANAGD+GGYYCPCHGSHYD SGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGYYCPCHGSHYDVSGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|391226633|gb|AFM38204.1| Rieske Fe-S protein 1 [Anasa tristis]
Length = 267
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+ H+D++ PDFS YRR D D E RK+FTY+I GG V K++V Q++
Sbjct: 71 ILHNDLKVPDFSNYRRPSVKDPRRDSRSSEEARKSFTYLIVGGGGVAAAYATKTIVAQYV 130
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
M+A+ADVLA+A IEV+L+ IPEG+++ FKWRGKPLFI+HRTQ+EI E+ T +S+LRD
Sbjct: 131 ECMAATADVLALAKIEVNLSEIPEGKNMAFKWRGKPLFIKHRTQEEIQKERETPLSELRD 190
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D DRV+ P WL++IG+CTHLGCVP+ANAGDW GYYCPCHGSHYD SGRIRKGPAPTN
Sbjct: 191 PERDEDRVQKPEWLILIGVCTHLGCVPMANAGDWNGYYCPCHGSHYDNSGRIRKGPAPTN 250
Query: 178 MEVPPYQFGDEGILI 192
ME+PPY+F +E L+
Sbjct: 251 MEIPPYEFINENTLV 265
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
Query: 185 FGDEGILIRMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMV 240
F E R+L H+D++ PDFS YRR D D E RK+FTY+I GG V
Sbjct: 62 FSPESCKDRIL-HNDLKVPDFSNYRRPSVKDPRRDSRSSEEARKSFTYLIVGGGGVAAAY 120
Query: 241 CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
K++V Q++ M+A+ADVLA+A IEV+L+ IPEG+++ FKWRGKPLFI+HR
Sbjct: 121 ATKTIVAQYVECMAATADVLALAKIEVNLSEIPEGKNMAFKWRGKPLFIKHR 172
>gi|54036558|sp|Q69BK0.1|UCRI_COLPO RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939386|gb|AAR32736.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Colobus polykomos]
Length = 274
Score = 266 bits (680), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK+F+YM+ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFCDYRRPEVLDSTKSSRESSEARKSFSYMVTAVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IEV L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 259 EVPTYEFTSDDMVV 272
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK+F+YM+ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFCDYRRPEVLDSTKSSRESSEARKSFSYMVTAVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IEV L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|198475424|ref|XP_002132913.1| GA25273 [Drosophila pseudoobscura pseudoobscura]
gi|198138817|gb|EDY70315.1| GA25273 [Drosophila pseudoobscura pseudoobscura]
Length = 230
Score = 266 bits (680), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/193 (66%), Positives = 151/193 (78%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRRD D + + +RKAF+Y++ GG +V G AK +VN F+ S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNESAEERKAFSYLLVGGGAVGGAYAAKGLVNAFLGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHRTQ EIDTE+ S LRDP+
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHRTQAEIDTERGVPTSSLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 TDDQRVIKPQWLVVIGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG LI
Sbjct: 216 VPTHEFPDEGTLI 228
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRRD D + + +RKAF+Y++ GG +V G AK +VN F+ S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNESAEERKAFSYLLVGGGAVGGAYAAKGLVNAFLGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHR 135
>gi|327284704|ref|XP_003227076.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Anolis carolinensis]
Length = 274
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDK---GQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
H+D+ PDFS YRR D QE ++ RKAF+Y + + V AK+VV QF+
Sbjct: 78 FVHNDVNVPDFSDYRRHEVLDSKTSSQESSETRKAFSYFLTATTCVATAYVAKNVVTQFV 137
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +++LRD
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAQVALTELRD 197
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV+ P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 198 PQHDLDRVQKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPYN 257
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F E ++I
Sbjct: 258 LEVPHYEFPSEDLVI 272
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDK---GQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
H+D+ PDFS YRR D QE ++ RKAF+Y + + V AK+VV QF+
Sbjct: 78 FVHNDVNVPDFSDYRRHEVLDSKTSSQESSETRKAFSYFLTATTCVATAYVAKNVVTQFV 137
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|39939340|gb|AAR32724.1| Rieske iron sulfur protein [Otolemur crassicaudatus]
Length = 195
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/193 (61%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+DIR PDFS YRR D + RK F+Y++ ++V AK+ V QF+SS
Sbjct: 1 HTDIRVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVSS 60
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDPQ
Sbjct: 61 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVEVSQLRDPQ 120
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 121 HDLERVKKPEWVILIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLNLE 180
Query: 180 VPPYQFGDEGILI 192
VP Y+F + ++I
Sbjct: 181 VPTYEFTSDDLVI 193
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+DIR PDFS YRR D + RK F+Y++ ++V AK+ V QF+SS
Sbjct: 1 HTDIRVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVTQFVSS 60
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 61 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 100
>gi|332251894|ref|XP_003275084.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Nomascus leucogenys]
Length = 274
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|3891852|pdb|1QCR|E Chain E, Crystal Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex, Alpha Carbon Atoms Only
gi|4139396|pdb|1BGY|E Chain E, Cytochrome Bc1 Complex From Bovine
gi|4139407|pdb|1BGY|Q Chain Q, Cytochrome Bc1 Complex From Bovine
gi|4389310|pdb|1BE3|E Chain E, Cytochrome Bc1 Complex From Bovine
gi|30749379|pdb|1L0L|E Chain E, Structure Of Bovine Mitochondrial Cytochrome Bc1 Complex
With A Bound Fungicide Famoxadone
gi|30749390|pdb|1L0N|E Chain E, Native Structure Of Bovine Mitochondrial Cytochrome Bc1
Complex
gi|37926969|pdb|1NTK|E Chain E, Crystal Structure Of Mitochondrial Cytochrome Bc1 In
Complex With Antimycin A1
gi|37926982|pdb|1NTM|E Chain E, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
At 2.4 Angstrom
gi|37927001|pdb|1NTZ|E Chain E, Crystal Structure Of Mitochondrial Cytochrome Bc1 Complex
Bound With Ubiquinone
gi|37927022|pdb|1NU1|E Chain E, Crystal Structure Of Mitochondrial Cytochrome Bc1
Complexed With 2- Nonyl-4-Hydroxyquinoline N-Oxide
(Nqno)
gi|51247156|pdb|1PP9|E Chain E, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|51247166|pdb|1PP9|R Chain R, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|51247176|pdb|1PPJ|E Chain E, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
gi|51247186|pdb|1PPJ|R Chain R, Bovine Cytochrome Bc1 Complex With Stigmatellin And
Antimycin
gi|55669768|pdb|1SQB|E Chain E, Crystal Structure Analysis Of Bovine Bc1 With Azoxystrobin
gi|71042579|pdb|2A06|E Chain E, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|71042589|pdb|2A06|R Chain R, Bovine Cytochrome Bc1 Complex With Stigmatellin Bound
gi|75765183|pdb|1SQV|E Chain E, Crystal Structure Analysis Of Bovine Bc1 With Uhdbt
gi|75765194|pdb|1SQX|E Chain E, Crystal Structure Analysis Of Bovine Bc1 With Stigmatellin
A
gi|82407280|pdb|1SQP|E Chain E, Crystal Structure Analysis Of Bovine Bc1 With Myxothiazol
gi|82407291|pdb|1SQQ|E Chain E, Crystal Structure Analysis Of Bovine Bc1 With Methoxy
Acrylate Stilbene (Moas)
gi|114793905|pdb|2FYU|E Chain E, Crystal Structure Of Bovine Heart Mitochondrial Bc1 With
Jg144 Inhibitor
gi|353251557|pdb|2YBB|E Chain E, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
gi|353251582|pdb|2YBB|EE Chain e, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
Length = 196
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 1 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 61 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 181 EVPSYEFTSDDMVI 194
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 1 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 61 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 101
>gi|54036554|sp|Q69BJ6.1|UCRI_HYLSY RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Contains: RecName: Full=Cytochrome
b-c1 complex subunit 11; AltName: Full=Complex III
subunit IX; AltName: Full=Ubiquinol-cytochrome c
reductase 8 kDa protein; Flags: Precursor
gi|39939358|gb|AAR32729.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Symphalangus syndactylus]
Length = 274
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|27807365|ref|NP_777238.1| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Bos taurus]
gi|163044|gb|AAA30515.1| Rieske iron-sulfur protein precursor [Bos taurus]
Length = 269
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 74 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 133
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 134 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 193
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 194 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 253
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 254 EVPSYEFTSDDMVI 267
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 74 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 133
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 134 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 174
>gi|308322965|gb|ADO28620.1| mitochondrial cytochrome b-c1 complex subunit rieske [Ictalurus
punctatus]
Length = 273
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 156/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DIR PDFS YRR +P K +E+ R+ F+Y++ G + VVG+ AK+ V QFI
Sbjct: 77 FAHTDIRVPDFSDYRRPEVSDPKKSSQESADARRVFSYLVTGPTVVVGVYTAKTAVTQFI 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVL ++ +E+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI E ++SQLRD
Sbjct: 137 SSMSASADVLVLSKVEIKLSDIPEGKNMVFKWRGKPLFVRHRTEKEIAAEAEVDLSQLRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D DRV+ PSW+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PEHDLDRVQKPSWIIVIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE ++
Sbjct: 257 LEVPYYEFPDEDTVV 271
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 76/102 (74%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DIR PDFS YRR +P K +E+ R+ F+Y++ G + VVG+ AK+ V QFI
Sbjct: 77 FAHTDIRVPDFSDYRRPEVSDPKKSSQESADARRVFSYLVTGPTVVVGVYTAKTAVTQFI 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVL ++ +E+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLVLSKVEIKLSDIPEGKNMVFKWRGKPLFVRHR 178
>gi|195159740|ref|XP_002020736.1| GL14741 [Drosophila persimilis]
gi|194117686|gb|EDW39729.1| GL14741 [Drosophila persimilis]
Length = 230
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 127/193 (65%), Positives = 151/193 (78%), Gaps = 3/193 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDF+ YRRD D + + +RKAF+Y++ GG +V G AK +VN F+ S
Sbjct: 36 AHTDLQVPDFTAYRRDSVKDSRRRNESAEERKAFSYLLVGGGAVGGAYAAKGLVNAFLGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHRTQ EIDTE+ S LRDP+
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHRTQAEIDTERGVPTSSLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D RV P WLV+IG+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 TDDQRVIKPQWLVVIGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VPPYQFGDEGILI 192
VP ++F DEG LI
Sbjct: 216 VPTHEFPDEGTLI 228
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDF+ YRRD D + + +RKAF+Y++ GG +V G AK +VN F+ S
Sbjct: 36 AHTDLQVPDFTAYRRDSVKDSRRRNESAEERKAFSYLLVGGGAVGGAYAAKGLVNAFLGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE+ L I EG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASADVLAMAKIEIKLADIAEGKSVTFKWRGKPLFIRHR 135
>gi|72148403|ref|XP_780127.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 274
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQ----EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS+YRRD D + T R+ F+Y++ GG ++ AK++V FI
Sbjct: 78 FAHTDIQVPDFSEYRRDTTSDPKKPASTSSTDRQMFSYLLVGGGTIAATYGAKNIVTDFI 137
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+M+ASADVLAMA IE+ L IPEG+++TFKWRGKPLF+RHRTQ+EID + +++ LRD
Sbjct: 138 QTMNASADVLAMAKIEIKLEEIPEGKNMTFKWRGKPLFVRHRTQEEIDECVSVDVASLRD 197
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RV+ WLV+IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 198 PQHDKERVQKDEWLVLIGVCTHLGCVPIANAGEYGGYYCPCHGSHYDASGRIRKGPAPLN 257
Query: 178 MEVPPYQFGDEGILI 192
+E+P Y F + +LI
Sbjct: 258 LEIPEYTFPTDEMLI 272
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKGQ----EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS+YRRD D + T R+ F+Y++ GG ++ AK++V FI
Sbjct: 78 FAHTDIQVPDFSEYRRDTTSDPKKPASTSSTDRQMFSYLLVGGGTIAATYGAKNIVTDFI 137
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+M+ASADVLAMA IE+ L IPEG+++TFKWRGKPLF+RHR
Sbjct: 138 QTMNASADVLAMAKIEIKLEEIPEGKNMTFKWRGKPLFVRHR 179
>gi|39939328|gb|AAR32718.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Cebus apella]
Length = 202
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QFIS
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTATTAVAVTYAAKSIVTQFIS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 187 EVPTYEFISDDLVI 200
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QFIS
Sbjct: 7 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTATTAVAVTYAAKSIVTQFIS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|225715786|gb|ACO13739.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Esox lucius]
Length = 273
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 157/195 (80%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+D++ PDFS YRR +P+K +E+ RKAF+Y++ G ++VVG+ AK+V QF+
Sbjct: 77 FAHTDVKVPDFSDYRRPELLDPNKSSQESSESRKAFSYLVTGATAVVGVYTAKTVAAQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IEV L+ IPEG+++TFKWRGKPLFIRHR+ KEI E+ +++ RD
Sbjct: 137 SSMSASADVLAMSKIEVKLSEIPEGKNMTFKWRGKPLFIRHRSAKEIAAEEAVEMAEFRD 196
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRV +P W+++IG+CTHLG VPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 197 PQHDKDRVTNPKWIIVIGVCTHLGYVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 256
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F DE ++
Sbjct: 257 LEVPYYEFPDEDTVV 271
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 81/102 (79%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+D++ PDFS YRR +P+K +E+ RKAF+Y++ G ++VVG+ AK+V QF+
Sbjct: 77 FAHTDVKVPDFSDYRRPELLDPNKSSQESSESRKAFSYLVTGATAVVGVYTAKTVAAQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IEV L+ IPEG+++TFKWRGKPLFIRHR
Sbjct: 137 SSMSASADVLAMSKIEVKLSEIPEGKNMTFKWRGKPLFIRHR 178
>gi|39939338|gb|AAR32723.1| ubiquinol-cytochrome c oxidoreductase subunit 9 and Rieske iron
sulfur protein [Tarsius syrichta]
Length = 202
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 7 SHTDIKVPDFSDYRRAEVLDSTTSSRESSEARKGFSYLVTAATTVGVAYAAKNAVSQFVS 66
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 126
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 127 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 186
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 187 EVPSYEFTSDDMVI 200
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 7 SHTDIKVPDFSDYRRAEVLDSTTSSRESSEARKGFSYLVTAATTVGVAYAAKNAVSQFVS 66
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 67 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 107
>gi|126296030|ref|XP_001363023.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Monodelphis domestica]
Length = 274
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS YRR RK F+Y+I ++V AK+ V+QF+S
Sbjct: 79 SHTDVKVPDFSPYRRSDVLDSTKSSKDSSESRKGFSYLITATTTVGVAYAAKNAVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ KWRGKPLF+RHRTQKEI+ E +++QLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNIALKWRGKPLFVRHRTQKEIEQEAAVDLAQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q DSDRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDSDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPSYEFTSDDLVI 272
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS YRR RK F+Y+I ++V AK+ V+QF+S
Sbjct: 79 SHTDVKVPDFSPYRRSDVLDSTKSSKDSSESRKGFSYLITATTTVGVAYAAKNAVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ KWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNIALKWRGKPLFVRHR 179
>gi|444515726|gb|ELV10973.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial, partial
[Tupaia chinensis]
Length = 254
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 59 SHTDIKVPDFSDYRRTDVLDSTKSSKESSEARKGFSYLVTAATTVGVAYAAKNVVSQFVS 118
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEI+ E +SQLRDP
Sbjct: 119 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIEQEAAVEVSQLRDP 178
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 179 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 238
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + I+I
Sbjct: 239 EVPFYEFTSDDIVI 252
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 59 SHTDIKVPDFSDYRRTDVLDSTKSSKESSEARKGFSYLVTAATTVGVAYAAKNVVSQFVS 118
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 119 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 159
>gi|193806571|sp|P0C7P4.1|UCRIL_HUMAN RecName: Full=Putative cytochrome b-c1 complex subunit Rieske-like
protein 1; AltName: Full=Ubiquinol-cytochrome c
reductase Rieske iron-sulfur subunit pseudogene 1
Length = 283
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 88 SHTDIKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 147
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI E +SQLRDP
Sbjct: 148 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDP 207
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPA N+
Sbjct: 208 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNL 267
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 268 EVPTYEFTSDDMVI 281
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 88 SHTDIKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 147
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 148 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 188
>gi|91091738|ref|XP_967958.1| PREDICTED: similar to Rieske iron-sulfur protein CG7361-PB
[Tribolium castaneum]
gi|270001288|gb|EEZ97735.1| hypothetical protein TcasGA2_TC011373 [Tribolium castaneum]
Length = 205
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 149/193 (77%), Gaps = 2/193 (1%)
Query: 2 LAHSDIRTPDFSKYRRDRNP--DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+DI+ PDF+ YRR+ NP R YM++G + V + AK+ V +++
Sbjct: 11 FAHTDIQVPDFTPYRRNPNPCSSSSSSAPSRHLVPYMVSGTAVTVALYGAKAEVIRYVEF 70
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ASADVLA+A IE+ L IPEG++ TFKWRGKPLFI+HRT +EI TE++ +++ LR P+
Sbjct: 71 MAASADVLALAKIEIKLEDIPEGKNATFKWRGKPLFIKHRTPEEIQTERSVDVATLRHPE 130
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
DS+RVKDP+WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYD+SGRIRKGPAPTN+E
Sbjct: 131 HDSERVKDPAWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDSSGRIRKGPAPTNLE 190
Query: 180 VPPYQFGDEGILI 192
VP Y F D G LI
Sbjct: 191 VPEYHFPDAGTLI 203
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 191 LIRMLAHSDIRTPDFSKYRRDRNP--DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
+I AH+DI+ PDF+ YRR+ NP R YM++G + V + AK+ V +
Sbjct: 7 IISRFAHTDIQVPDFTPYRRNPNPCSSSSSSAPSRHLVPYMVSGTAVTVALYGAKAEVIR 66
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ASADVLA+A IE+ L IPEG++ TFKWRGKPLFI+HR
Sbjct: 67 YVEFMAASADVLALAKIEIKLEDIPEGKNATFKWRGKPLFIKHR 110
>gi|57524866|ref|NP_001005843.1| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Gallus gallus]
gi|75571417|sp|Q5ZLR5.1|UCRI_CHICK RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|53128721|emb|CAG31328.1| hypothetical protein RCJMB04_5b19 [Gallus gallus]
Length = 272
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 148/194 (76%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHRTQ EI+ E ++S+LRDPQ
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 198 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 257
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 258 VPTYQFVGDDLVVV 271
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHR
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHR 177
>gi|57114330|ref|NP_001008888.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Rattus
norvegicus]
gi|52001457|sp|P20788.2|UCRI_RAT RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Cytochrome b-c1 complex subunit 5;
AltName: Full=Liver regeneration-related protein
LRRGT00195; AltName: Full=Rieske iron-sulfur protein;
Short=RISP; AltName: Full=Ubiquinol-cytochrome c
reductase iron-sulfur subunit; Contains: RecName:
Full=Cytochrome b-c1 complex subunit 11; AltName:
Full=Complex III subunit IX; AltName:
Full=Ubiquinol-cytochrome c reductase 8 kDa protein;
Flags: Precursor
gi|45478230|gb|AAS66286.1| LRRGT00195 [Rattus norvegicus]
gi|55154120|gb|AAH85339.1| Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Rattus norvegicus]
gi|149045286|gb|EDL98372.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1,
isoform CRA_b [Rattus norvegicus]
Length = 274
Score = 264 bits (675), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F +++
Sbjct: 259 EVPTYEFTSGDVVV 272
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|380011280|ref|XP_003689738.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Apis florea]
Length = 246
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 149/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEE--TQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YR + ++P +E + RK+F Y++ S V G AKS ++ +
Sbjct: 50 LAHTDIQWPDFSDYRHEAVQDPRSKSKENSSSRKSFAYLMTAASGVTGAYIAKSAIHNLV 109
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
++ SASADVLA+A IE+ L+ IPEG+S FKWRGKP+F+RHR+ KEI+ E +I LRD
Sbjct: 110 ATFSASADVLALAKIEIKLDAIPEGKSAVFKWRGKPIFVRHRSTKEIEKEAAVDIKILRD 169
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK P WL+++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 170 PQVDLDRVKQPQWLIVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 229
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY F D+ ++
Sbjct: 230 LEVPPYDFIDDNTVV 244
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYRRD--RNPDKGQEE--TQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+DI+ PDFS YR + ++P +E + RK+F Y++ S V G AKS ++
Sbjct: 48 RRLAHTDIQWPDFSDYRHEAVQDPRSKSKENSSSRKSFAYLMTAASGVTGAYIAKSAIHN 107
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+++ SASADVLA+A IE+ L+ IPEG+S FKWRGKP+F+RHR
Sbjct: 108 LVATFSASADVLALAKIEIKLDAIPEGKSAVFKWRGKPIFVRHR 151
>gi|159472081|ref|XP_001694184.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270179|gb|EDO96122.1| predicted protein [Chlamydomonas reinhardtii]
Length = 272
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 148/194 (76%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHRTQ EI+ E ++S+LRDPQ
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 198 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 257
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 258 VPTYQFVGDDLVVV 271
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHR
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHR 177
>gi|357620265|gb|EHJ72520.1| ubiquinol-cytochrome c reductase [Danaus plexippus]
Length = 271
Score = 264 bits (674), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 128/195 (65%), Positives = 152/195 (77%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD---KGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI PDFS YRR + D K + +R+AFTY+IAG SV AKSVV QF+
Sbjct: 75 FAHTDIAYPDFSAYRRKESQDPKVKADDSVDRRQAFTYLIAGAGSVASAYAAKSVVTQFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSM+A+ADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHRT EI TE+ + QLRD
Sbjct: 135 SSMAAAADVLALAKIEIKLGDIPEGKSVTFKWRGKPLFIRHRTANEISTEKAVPVDQLRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D R +DP WLV+IG+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 195 PEHDDQRTQDPKWLVVIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+EVPP+ F DE +L+
Sbjct: 255 LEVPPHTFVDESLLV 269
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 75/102 (73%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPD---KGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI PDFS YRR + D K + +R+AFTY+IAG SV AKSVV QF+
Sbjct: 75 FAHTDIAYPDFSAYRRKESQDPKVKADDSVDRRQAFTYLIAGAGSVASAYAAKSVVTQFV 134
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSM+A+ADVLA+A IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 135 SSMAAAADVLALAKIEIKLGDIPEGKSVTFKWRGKPLFIRHR 176
>gi|119580759|gb|EAW60355.1| hCG1641472 [Homo sapiens]
Length = 274
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPA N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>gi|206681|gb|AAA42051.1| Rieske Fe-S protein precursor, partial [Rattus norvegicus]
Length = 256
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 61 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 120
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 121 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 180
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 181 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 240
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F +++
Sbjct: 241 EVPTYEFTSGDVVV 254
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 61 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 120
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 121 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 161
>gi|354468805|ref|XP_003496841.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Cricetulus griseus]
Length = 239
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS YRR D + RK F+Y+I ++V AK+VV QF+S
Sbjct: 44 SHTDVKVPDFSDYRRADVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVTQFVS 103
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI E +SQLRDP
Sbjct: 104 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIAQEAAVEVSQLRDP 163
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR+GPAP N+
Sbjct: 164 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRRGPAPLNL 223
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 224 EVPTYEFTSDDVVV 237
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS YRR D + RK F+Y+I ++V AK+VV QF+S
Sbjct: 44 SHTDVKVPDFSDYRRADVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVVTQFVS 103
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 104 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 144
>gi|149045287|gb|EDL98373.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1,
isoform CRA_c [Rattus norvegicus]
Length = 255
Score = 263 bits (673), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 60 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 119
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 120 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 179
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 180 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 239
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F +++
Sbjct: 240 EVPTYEFTSGDVVV 253
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 60 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 119
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 120 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 160
>gi|328776195|ref|XP_394657.2| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
[Apis mellifera]
Length = 246
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 150/195 (76%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEE--TQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDFS YR + ++P +E + RK+F Y++ S + G AKS ++ +
Sbjct: 50 LAHTDIQWPDFSDYRHEAVQDPRSKSKENSSSRKSFAYVMTAASGITGAYIAKSAIHDLV 109
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
++ SASADVLA+A IE+ L+ IPEG+S FKWRGKP+F+RHR++KEI+ E +I LRD
Sbjct: 110 ATFSASADVLALAKIEIKLDAIPEGKSAVFKWRGKPIFVRHRSKKEIEKEAAVDIKILRD 169
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK P WL+++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 170 PQVDLDRVKQPQWLIVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 229
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY F D+ ++
Sbjct: 230 LEVPPYDFIDDNTVV 244
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 73/104 (70%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYRRD--RNPDKGQEE--TQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+DI+ PDFS YR + ++P +E + RK+F Y++ S + G AKS ++
Sbjct: 48 RRLAHTDIQWPDFSDYRHEAVQDPRSKSKENSSSRKSFAYVMTAASGITGAYIAKSAIHD 107
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+++ SASADVLA+A IE+ L+ IPEG+S FKWRGKP+F+RHR
Sbjct: 108 LVATFSASADVLALAKIEIKLDAIPEGKSAVFKWRGKPIFVRHR 151
>gi|196049779|pdb|3CWB|E Chain E, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated
Analogue Of The Polyketide Crocacin-d
gi|196049789|pdb|3CWB|R Chain R, Chicken Cytochrome Bc1 Complex Inhibited By An Iodinated
Analogue Of The Polyketide Crocacin-d
gi|228312417|pdb|3H1H|E Chain E, Cytochrome Bc1 Complex From Chicken
gi|228312427|pdb|3H1H|R Chain R, Cytochrome Bc1 Complex From Chicken
gi|228312439|pdb|3H1I|E Chain E, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|228312449|pdb|3H1I|R Chain R, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|228312462|pdb|3H1J|E Chain E, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
gi|228312472|pdb|3H1J|R Chain R, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
gi|228312486|pdb|3H1K|E Chain E, Chicken Cytochrome Bc1 Complex With Zn++ And An Iodinated
Derivative Of Kresoxim-Methyl Bound
gi|228312496|pdb|3H1K|R Chain R, Chicken Cytochrome Bc1 Complex With Zn++ And An Iodinated
Derivative Of Kresoxim-Methyl Bound
gi|283135347|pdb|3H1L|E Chain E, Chicken Cytochrome Bc1 Complex With Ascochlorin Bound At
Qo And Qi Sites
gi|283135357|pdb|3H1L|R Chain R, Chicken Cytochrome Bc1 Complex With Ascochlorin Bound At
Qo And Qi Sites
gi|285803642|pdb|3L70|E Chain E, Cytochrome Bc1 Complex From Chicken With Trifloxystrobin
Bound
gi|285803652|pdb|3L70|R Chain R, Cytochrome Bc1 Complex From Chicken With Trifloxystrobin
Bound
gi|285803662|pdb|3L71|E Chain E, Cytochrome Bc1 Complex From Chicken With Azoxystrobin
Bound
gi|285803672|pdb|3L71|R Chain R, Cytochrome Bc1 Complex From Chicken With Azoxystrobin
Bound
gi|285803682|pdb|3L72|E Chain E, Chicken Cytochrome Bc1 Complex With Kresoxym-I-Dimethyl
Bound
gi|285803692|pdb|3L72|R Chain R, Chicken Cytochrome Bc1 Complex With Kresoxym-I-Dimethyl
Bound
gi|285803702|pdb|3L73|E Chain E, Cytochrome Bc1 Complex From Chicken With Triazolone
Inhibitor
gi|285803712|pdb|3L73|R Chain R, Cytochrome Bc1 Complex From Chicken With Triazolone
Inhibitor
gi|285803722|pdb|3L74|E Chain E, Cytochrome Bc1 Complex From Chicken With Famoxadone Bound
gi|285803732|pdb|3L74|R Chain R, Cytochrome Bc1 Complex From Chicken With Famoxadone Bound
gi|285803742|pdb|3L75|E Chain E, Cytochrome Bc1 Complex From Chicken With Fenamidone Bound
gi|285803752|pdb|3L75|R Chain R, Cytochrome Bc1 Complex From Chicken With Fenamidone Bound
gi|393715171|pdb|3TGU|E Chain E, Cytochrome Bc1 Complex From Chicken With Pfvs-Designed Moa
Inhibitor Bound
gi|393715181|pdb|3TGU|R Chain R, Cytochrome Bc1 Complex From Chicken With Pfvs-Designed Moa
Inhibitor Bound
Length = 196
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 148/194 (76%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 2 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 61
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHRTQ EI+ E ++S+LRDPQ
Sbjct: 62 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQ 121
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 122 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 181
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 182 VPTYQFVGDDLVVV 195
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 2 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 61
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHR
Sbjct: 62 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHR 101
>gi|3659971|pdb|1BCC|E Chain E, Cytochrome Bc1 Complex From Chicken
gi|3660380|pdb|3BCC|E Chain E, Stigmatellin And Antimycin Bound Cytochrome Bc1 Complex
From Chicken
gi|5822461|pdb|2BCC|E Chain E, Stigmatellin-Bound Cytochrome Bc1 Complex From Chicken
Length = 196
Score = 263 bits (671), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR--DRNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ P+FS YRR D K E+ RK F+Y++ +++ AK+VV QF+S
Sbjct: 1 SHTDIKVPNFSDYRRPPDDYSTKSSRESDPSRKGFSYLVTAVTTLGVAYAAKNVVTQFVS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 61 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 181 EVPSYEFTSDDMVI 194
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR--DRNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ P+FS YRR D K E+ RK F+Y++ +++ AK+VV QF+S
Sbjct: 1 SHTDIKVPNFSDYRRPPDDYSTKSSRESDPSRKGFSYLVTAVTTLGVAYAAKNVVTQFVS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 61 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 101
>gi|395505856|ref|XP_003757253.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Sarcophilus harrisii]
Length = 262
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D RK F+Y+I ++V AK++V+QF+S
Sbjct: 67 SHTDIKVPDFSAYRRADVLDSKKSSKDSSESRKGFSYLITATTTVGVAYAAKNIVSQFVS 126
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVL M+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E ++SQLRDP
Sbjct: 127 SMSASADVLVMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVDVSQLRDP 186
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 187 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 246
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F ++I
Sbjct: 247 EVPAYEFTGNDLVI 260
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D RK F+Y+I ++V AK++V+QF+S
Sbjct: 67 SHTDIKVPDFSAYRRADVLDSKKSSKDSSESRKGFSYLITATTTVGVAYAAKNIVSQFVS 126
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVL M+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 127 SMSASADVLVMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 167
>gi|345328321|ref|XP_001506483.2| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 361
Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 151/195 (77%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR RK F+Y+I ++V AK+VV+QF+S
Sbjct: 166 SHTDIKVPDFSDYRRAEVSDSTKSSKDSSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 225
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 226 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEGAVEVSQLRDP 285
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 286 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 345
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 346 EVPAYEFTGDDLVIV 360
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR RK F+Y+I ++V AK+VV+QF+S
Sbjct: 166 SHTDIKVPDFSDYRRAEVSDSTKSSKDSSEARKGFSYLITATTTVGVAYAAKNVVSQFVS 225
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 226 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 266
>gi|221131677|ref|XP_002158337.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 1 [Hydra magnipapillata]
Length = 268
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
H+D+ PDF+ YRRD D + + R+AFTY++ G V G K++ FI
Sbjct: 72 FGHTDVSVPDFTAYRRDDTKDPTSQYSDTDISRRAFTYVMVAGLGVTGAHAGKNIAIDFI 131
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S+MSASADVLA+A +EVDL IP G+++T KWRGKPLF+RHRT +EID + N++ LRD
Sbjct: 132 STMSASADVLAVAKVEVDLTTIPPGKNITIKWRGKPLFVRHRTHEEIDQVRAVNVASLRD 191
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK+PS+LV++G+CTHLGCVPIANAGD+GGY+CPCHGSHYDASGRIRKGPAP N
Sbjct: 192 PQMDEDRVKNPSYLVVLGVCTHLGCVPIANAGDFGGYFCPCHGSHYDASGRIRKGPAPLN 251
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F + LI
Sbjct: 252 LEVPNYEFTPDSKLI 266
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 189 GILIRMLAHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKS 244
G + + H+D+ PDF+ YRRD D + + R+AFTY++ G V G K+
Sbjct: 66 GKIQQRFGHTDVSVPDFTAYRRDDTKDPTSQYSDTDISRRAFTYVMVAGLGVTGAHAGKN 125
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ FIS+MSASADVLA+A +EVDL IP G+++T KWRGKPLF+RHR
Sbjct: 126 IAIDFISTMSASADVLAVAKVEVDLTTIPPGKNITIKWRGKPLFVRHR 173
>gi|147901416|ref|NP_001090500.1| uncharacterized protein LOC779413 [Xenopus laevis]
gi|116063424|gb|AAI23358.1| MGC154858 protein [Xenopus laevis]
Length = 273
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD+ PDFS YRR D RK F+Y++ G ++V AK+ V+QF++S
Sbjct: 79 HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKTFSYLVTGATAVASAYAAKNAVSQFVTS 138
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT KEID E ++S LRDPQ
Sbjct: 139 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTAKEIDQEAQVSLSDLRDPQ 198
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 199 HDLDRVKKPEWVILIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLE 258
Query: 180 VPPYQFGDEGILI 192
VP Y+F E ++I
Sbjct: 259 VPEYEFPSEDLVI 271
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
+R L HSD+ PDFS YRR D RK F+Y++ G ++V AK+ V+
Sbjct: 75 VRFL-HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKTFSYLVTGATAVASAYAAKNAVS 133
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
QF++SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 134 QFVTSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 178
>gi|449667412|ref|XP_004206559.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like isoform 2 [Hydra magnipapillata]
Length = 224
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 147/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
H+D+ PDF+ YRRD D + + R+AFTY++ G V G K++ FI
Sbjct: 28 FGHTDVSVPDFTAYRRDDTKDPTSQYSDTDISRRAFTYVMVAGLGVTGAHAGKNIAIDFI 87
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S+MSASADVLA+A +EVDL IP G+++T KWRGKPLF+RHRT +EID + N++ LRD
Sbjct: 88 STMSASADVLAVAKVEVDLTTIPPGKNITIKWRGKPLFVRHRTHEEIDQVRAVNVASLRD 147
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK+PS+LV++G+CTHLGCVPIANAGD+GGY+CPCHGSHYDASGRIRKGPAP N
Sbjct: 148 PQMDEDRVKNPSYLVVLGVCTHLGCVPIANAGDFGGYFCPCHGSHYDASGRIRKGPAPLN 207
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F + LI
Sbjct: 208 LEVPNYEFTPDSKLI 222
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 189 GILIRMLAHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKS 244
G + + H+D+ PDF+ YRRD D + + R+AFTY++ G V G K+
Sbjct: 22 GKIQQRFGHTDVSVPDFTAYRRDDTKDPTSQYSDTDISRRAFTYVMVAGLGVTGAHAGKN 81
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ FIS+MSASADVLA+A +EVDL IP G+++T KWRGKPLF+RHR
Sbjct: 82 IAIDFISTMSASADVLAVAKVEVDLTTIPPGKNITIKWRGKPLFVRHR 129
>gi|37811697|gb|AAR03847.1| rieske iron-sulfur protein [Tigriopus californicus]
Length = 227
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 146/195 (74%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 31 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 90
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 91 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 150
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 151 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 210
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F +EG++I
Sbjct: 211 LEVPEYEFPEEGMVI 225
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 31 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 90
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 91 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 132
>gi|383860833|ref|XP_003705893.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Megachile rotundata]
Length = 248
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/198 (58%), Positives = 148/198 (74%), Gaps = 10/198 (5%)
Query: 2 LAHSDIRTPDFSKYRRDRN-------PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 54
LAH+DI+ PDF+ YR+ N PDK RK +TY++ V G AKS+V+
Sbjct: 52 LAHTDIQWPDFTPYRQQSNKDPTVNDPDKAD---TRKTYTYVVTAALGVAGAYSAKSIVH 108
Query: 55 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
++ ++AS DV+A+A IEV L+ IPEG+SV FKWRGKPLF+RHR+ KEI+ E +I+
Sbjct: 109 NVVAMLAASKDVMALAKIEVKLDTIPEGKSVVFKWRGKPLFVRHRSAKEIEKESQVDIAS 168
Query: 115 LRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPA 174
LRDPQ D DRVK P WL+++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPA
Sbjct: 169 LRDPQEDKDRVKQPEWLIVLGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPA 228
Query: 175 PTNMEVPPYQFGDEGILI 192
P N+EVP Y+F +E ++
Sbjct: 229 PLNLEVPEYEFLNETTVV 246
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 10/107 (9%)
Query: 193 RMLAHSDIRTPDFSKYRRDRN-------PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSV 245
R LAH+DI+ PDF+ YR+ N PDK RK +TY++ V G AKS+
Sbjct: 50 RRLAHTDIQWPDFTPYRQQSNKDPTVNDPDKAD---TRKTYTYVVTAALGVAGAYSAKSI 106
Query: 246 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V+ ++ ++AS DV+A+A IEV L+ IPEG+SV FKWRGKPLF+RHR
Sbjct: 107 VHNVVAMLAASKDVMALAKIEVKLDTIPEGKSVVFKWRGKPLFVRHR 153
>gi|45360473|ref|NP_988911.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Xenopus (Silurana) tropicalis]
gi|38181721|gb|AAH59770.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Xenopus (Silurana) tropicalis]
gi|89272032|emb|CAJ83175.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Xenopus (Silurana) tropicalis]
Length = 273
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD+ PDFS YRR D RK+F+Y++ G ++V AK+ V QF++S
Sbjct: 79 HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKSFSYLVTGVTAVATAYAAKNAVTQFVTS 138
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT KEID E N++ LRDPQ
Sbjct: 139 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTAKEIDQEAQVNLTDLRDPQ 198
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 199 HDLDRVKKPEWVILIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLE 258
Query: 180 VPPYQFGDEGILI 192
VP Y+F + ++I
Sbjct: 259 VPEYEFPSDDLVI 271
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
+R L HSD+ PDFS YRR D RK+F+Y++ G ++V AK+ V
Sbjct: 75 VRFL-HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKSFSYLVTGVTAVATAYAAKNAVT 133
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
QF++SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 134 QFVTSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 178
>gi|326927297|ref|XP_003209829.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like, partial [Meleagris gallopavo]
Length = 214
Score = 261 bits (666), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 149/194 (76%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D +RK F+Y++ + V AK+VV QFISS
Sbjct: 20 HNDVTVPDFSAYRREDVLDATTSSQSSSEERKGFSYLVTATACVATAYAAKNVVTQFISS 79
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQ EI+ E ++S+LRDPQ
Sbjct: 80 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQ 139
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 140 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 199
Query: 180 VPPYQF-GDEGILI 192
VP Y+F GD+ +++
Sbjct: 200 VPTYEFVGDDLVIV 213
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 68/100 (68%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D +RK F+Y++ + V AK+VV QFISS
Sbjct: 20 HNDVTVPDFSAYRREDVLDATTSSQSSSEERKGFSYLVTATACVATAYAAKNVVTQFISS 79
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 80 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 119
>gi|195575811|ref|XP_002077770.1| GD22901 [Drosophila simulans]
gi|194189779|gb|EDX03355.1| GD22901 [Drosophila simulans]
Length = 249
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/182 (68%), Positives = 144/182 (79%), Gaps = 3/182 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRRD D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 156 ADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPLNLE 215
Query: 180 VP 181
VP
Sbjct: 216 VP 217
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRRD D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRDSVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|197127524|gb|ACH44022.1| putative ubiquinol-cytochrome c reductase core protein 1 variant 2
[Taeniopygia guttata]
Length = 273
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 147/194 (75%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR + RK F+Y++ + V AK+VV QFISS
Sbjct: 79 HNDVAVPDFSAYRRQDVQDASASSQGSSDSRKGFSYLMTAATGVATAYVAKNVVTQFISS 138
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQ EI E ++SQLRDPQ
Sbjct: 139 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQAEISQEAGVDVSQLRDPQ 198
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 199 HDLDRVKKPEWVILVGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 258
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 259 VPFYQFIGDDTVVV 272
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR + RK F+Y++ + V AK+VV QFISS
Sbjct: 79 HNDVAVPDFSAYRRQDVQDASASSQGSSDSRKGFSYLMTAATGVATAYVAKNVVTQFISS 138
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 178
>gi|307168648|gb|EFN61684.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Camponotus
floridanus]
Length = 280
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 119/200 (59%), Positives = 153/200 (76%), Gaps = 9/200 (4%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGG-----SSVVGMVCAKSV 52
LAH+DI+ PDF+ YR++ ++P +T RK+ +Y+IA G +SVVG+ AK +
Sbjct: 79 LAHTDIQWPDFTDYRKEEVKDPSSKSRDTAPSRKSISYVIAAGKYIRRASVVGVYGAKVI 138
Query: 53 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNI 112
V+ + +SASADVLA++ IEV L+ IPEG+S FKWRGKPLF+RHR+ EI E +
Sbjct: 139 VHDLVGILSASADVLALSKIEVKLDSIPEGKSAVFKWRGKPLFVRHRSDSEIANEAKVDF 198
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
+ LRDP+ DS RVKD WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKG
Sbjct: 199 ASLRDPEEDSARVKDSKWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKG 258
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY+F ++ +LI
Sbjct: 259 PAPLNLEVPPYEFAEDNMLI 278
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 77/109 (70%), Gaps = 9/109 (8%)
Query: 193 RMLAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGG-----SSVVGMVCAK 243
R LAH+DI+ PDF+ YR++ ++P +T RK+ +Y+IA G +SVVG+ AK
Sbjct: 77 RRLAHTDIQWPDFTDYRKEEVKDPSSKSRDTAPSRKSISYVIAAGKYIRRASVVGVYGAK 136
Query: 244 SVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+V+ + +SASADVLA++ IEV L+ IPEG+S FKWRGKPLF+RHR
Sbjct: 137 VIVHDLVGILSASADVLALSKIEVKLDSIPEGKSAVFKWRGKPLFVRHR 185
>gi|307197914|gb|EFN79013.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Harpegnathos
saltator]
Length = 271
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 119/195 (61%), Positives = 150/195 (76%), Gaps = 8/195 (4%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD---KGQEE-TQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+DI+ PDF YRRD D K +E + RK ++Y+I+ G+ V G AK +V +
Sbjct: 79 LAHTDIQFPDFIDYRRDETKDPSSKSKENASSRKGYSYLISAGN-VYG---AKVLVYDMV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S +SASADVLAM+ IE+ L+ IPEG+S FKWRGKPLF+RHR+ EI E +++ LRD
Sbjct: 135 SMLSASADVLAMSKIEIKLDTIPEGKSAVFKWRGKPLFVRHRSGTEISKETQVDVASLRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ DS RVKDP WLV++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 195 PEEDSARVKDPKWLVVLGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F + +L+
Sbjct: 255 LEVPPYEFLESNLLV 269
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 73/104 (70%), Gaps = 8/104 (7%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPD---KGQEE-TQRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R LAH+DI+ PDF YRRD D K +E + RK ++Y+I+ G+ V G AK +V
Sbjct: 77 RRLAHTDIQFPDFIDYRRDETKDPSSKSKENASSRKGYSYLISAGN-VYG---AKVLVYD 132
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+S +SASADVLAM+ IE+ L+ IPEG+S FKWRGKPLF+RHR
Sbjct: 133 MVSMLSASADVLAMSKIEIKLDTIPEGKSAVFKWRGKPLFVRHR 176
>gi|320168907|gb|EFW45806.1| Rieske iron-sulfur protein 1 [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 259 bits (662), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 146/190 (76%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
AH+DI+ PDFS YRR+ P + + + + F+Y + G + V K++V F+ SMSA
Sbjct: 92 AHTDIQVPDFSHYRREIAPTEAKGDPTSRLFSYFVVGATGVFTASIVKNIVVDFVMSMSA 151
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLA+A +EVDL+ IPEG++V WRGKPLF+RHRT+ EI + ++S+LRDPQ D+
Sbjct: 152 SADVLALAKVEVDLSAIPEGKNVVVTWRGKPLFVRHRTEAEIAEANSVSLSELRDPQMDA 211
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
+RV+ P WLV++G+CTHLGCVPIA+AGD+GGY+CPCHGSHYD SGRIR+GPAP N+EVPP
Sbjct: 212 ERVQQPKWLVLLGVCTHLGCVPIASAGDFGGYFCPCHGSHYDVSGRIRRGPAPLNLEVPP 271
Query: 183 YQFGDEGILI 192
Y F +E +I
Sbjct: 272 YSFLEENKII 281
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
AH+DI+ PDFS YRR+ P + + + + F+Y + G + V K++V F+ SMSA
Sbjct: 92 AHTDIQVPDFSHYRREIAPTEAKGDPTSRLFSYFVVGATGVFTASIVKNIVVDFVMSMSA 151
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLA+A +EVDL+ IPEG++V WRGKPLF+RHR
Sbjct: 152 SADVLALAKVEVDLSAIPEGKNVVVTWRGKPLFVRHR 188
>gi|260805600|ref|XP_002597674.1| hypothetical protein BRAFLDRAFT_217418 [Branchiostoma floridae]
gi|229282941|gb|EEN53686.1| hypothetical protein BRAFLDRAFT_217418 [Branchiostoma floridae]
Length = 204
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/195 (61%), Positives = 145/195 (74%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AHSDI PDF+ YRR D N + RKAF+YM+ GG +V AK+VV +
Sbjct: 8 FAHSDITVPDFNDYRRRDAQDPNKPAVSSDVSRKAFSYMLVGGCAVTCAYAAKNVVQDLV 67
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
++MSASADVLA+A IEV L IPEG+SVT KWRGKPLF+RHRT +E++ + + + LRD
Sbjct: 68 TTMSASADVLALAKIEVKLAEIPEGKSVTIKWRGKPLFVRHRTDEEVNEVRAVDHNTLRD 127
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D RV+ P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGR+RKGPAP N
Sbjct: 128 PEPDEIRVQKPEWLVLIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRLRKGPAPYN 187
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y F DE LI
Sbjct: 188 LEVPEYTFPDEETLI 202
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AHSDI PDF+ YRR D N + RKAF+YM+ GG +V AK+VV +
Sbjct: 8 FAHSDITVPDFNDYRRRDAQDPNKPAVSSDVSRKAFSYMLVGGCAVTCAYAAKNVVQDLV 67
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++MSASADVLA+A IEV L IPEG+SVT KWRGKPLF+RHR
Sbjct: 68 TTMSASADVLALAKIEVKLAEIPEGKSVTIKWRGKPLFVRHR 109
>gi|225712136|gb|ACO11914.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Lepeophtheirus salmonis]
Length = 276
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 153/193 (79%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD++ PDFS YRR D + RK F Y+++G +++VG+ KS+V++FI+S
Sbjct: 83 HSDVQVPDFSFYRRSATKDPTSVNDKNAANRKTFNYVVSGSTAIVGIYAGKSIVSKFINS 142
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ +ADVLA+A IE+ ++ IPEG+++ FKWRGKP+F+RHRT +EI+ E+N +++ LR P+
Sbjct: 143 MNPAADVLALAKIEIKISDIPEGKNMIFKWRGKPVFVRHRTSQEIEIEKNVDVASLRHPE 202
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
DS+R +D WLV++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 203 VDSERCQDEKWLVVVGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLE 262
Query: 180 VPPYQFGDEGILI 192
VP Y+F ++ +++
Sbjct: 263 VPTYEFKEDILVV 275
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
IR L HSD++ PDFS YRR D + RK F Y+++G +++VG+ KS+V+
Sbjct: 79 IRCL-HSDVQVPDFSFYRRSATKDPTSVNDKNAANRKTFNYVVSGSTAIVGIYAGKSIVS 137
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+FI+SM+ +ADVLA+A IE+ ++ IPEG+++ FKWRGKP+F+RHR
Sbjct: 138 KFINSMNPAADVLALAKIEIKISDIPEGKNMIFKWRGKPVFVRHR 182
>gi|224064724|ref|XP_002194892.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Taeniopygia guttata]
Length = 220
Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 147/194 (75%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR + RK F+Y++ + V AK+VV QFISS
Sbjct: 26 HNDVAVPDFSAYRRQDVQDASASSQGSSDSRKGFSYLMTAATGVATAYVAKNVVTQFISS 85
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQ EI E ++SQLRDPQ
Sbjct: 86 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQAEISQEAGVDVSQLRDPQ 145
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 146 HDLDRVKKPEWVILVGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 205
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 206 VPFYQFIGDDTVVV 219
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRRD----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR + RK F+Y++ + V AK+VV QFISS
Sbjct: 26 HNDVAVPDFSAYRRQDVQDASASSQGSSDSRKGFSYLMTAATGVATAYVAKNVVTQFISS 85
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 86 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 125
>gi|449268872|gb|EMC79709.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial, partial
[Columba livia]
Length = 203
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 141/186 (75%), Gaps = 4/186 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D RK F+Y++ + V AKSVV QFISS
Sbjct: 9 HNDVAVPDFSAYRRQEVLDSTASSQSSSEARKGFSYLLTATTCVATAYAAKSVVTQFISS 68
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQ EI E ++S+LRDPQ
Sbjct: 69 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQAEITQEAEVDVSKLRDPQ 128
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 129 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 188
Query: 180 VPPYQF 185
VP YQF
Sbjct: 189 VPTYQF 194
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D RK F+Y++ + V AKSVV QFISS
Sbjct: 9 HNDVAVPDFSAYRRQEVLDSTASSQSSSEARKGFSYLLTATTCVATAYAAKSVVTQFISS 68
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 69 LSASADVLALSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 108
>gi|198431780|ref|XP_002120316.1| PREDICTED: similar to ubiquinol-cytochrome c reductase, Rieske
iron-sulfur polypeptide 1 [Ciona intestinalis]
Length = 272
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/198 (60%), Positives = 150/198 (75%), Gaps = 9/198 (4%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKG-----QEETQRK----AFTYMIAGGSSVVGMVCAKSVV 53
AHSD+ PDF+ YR + + ++E QRK F Y I G+ + G+ AK+ V
Sbjct: 72 AHSDVTVPDFNDYRPNNVSNTAITNFREKEEQRKKDTKTFNYAITAGAWIGGVYVAKNTV 131
Query: 54 NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNIS 113
FI SMSASADVLA+A+IEV L +PEG+SVTFKWRGKPLFIRHRT +EI TE+ N++
Sbjct: 132 ELFIKSMSASADVLALASIEVPLADVPEGKSVTFKWRGKPLFIRHRTAEEIATEEAVNLA 191
Query: 114 QLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+LRDPQ D+ RV+ P +L+++GICTHLGCVPIA++GD+GGYYCPCHGSHYDASGRIRKGP
Sbjct: 192 ELRDPQHDNVRVQRPEFLIVVGICTHLGCVPIADSGDFGGYYCPCHGSHYDASGRIRKGP 251
Query: 174 APTNMEVPPYQFGDEGIL 191
AP N+EVP Y F EGI+
Sbjct: 252 APLNLEVPEYSFPSEGIV 269
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 71/106 (66%), Gaps = 9/106 (8%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKG-----QEETQRK----AFTYMIAGGSSVVGMVCAKSVV 246
AHSD+ PDF+ YR + + ++E QRK F Y I G+ + G+ AK+ V
Sbjct: 72 AHSDVTVPDFNDYRPNNVSNTAITNFREKEEQRKKDTKTFNYAITAGAWIGGVYVAKNTV 131
Query: 247 NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI SMSASADVLA+A+IEV L +PEG+SVTFKWRGKPLFIRHR
Sbjct: 132 ELFIKSMSASADVLALASIEVPLADVPEGKSVTFKWRGKPLFIRHR 177
>gi|147904657|ref|NP_001080250.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Xenopus laevis]
gi|27371203|gb|AAH41528.1| Uqcrfs1 protein [Xenopus laevis]
Length = 268
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/193 (61%), Positives = 148/193 (76%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD+ PDFS YRR D RK+F+Y++ G ++V AK+ V+QF++S
Sbjct: 74 HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKSFSYLVTGATAVATAYAAKNAVSQFVTS 133
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT KEID E ++S LRDPQ
Sbjct: 134 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTAKEIDQEAQVSLSDLRDPQ 193
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W+++IG+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 194 HDLDRVKKPEWVILIGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLE 253
Query: 180 VPPYQFGDEGILI 192
VP Y+F E ++I
Sbjct: 254 VPEYEFPSEDLVI 266
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
+R L HSD+ PDFS YRR D RK+F+Y++ G ++V AK+ V+
Sbjct: 70 VRFL-HSDVTVPDFSDYRRPEVLDSTKSSQTSSDSRKSFSYLVTGATAVATAYAAKNAVS 128
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
QF++SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 129 QFVTSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 173
>gi|432101067|gb|ELK29370.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Myotis
davidii]
Length = 226
Score = 256 bits (654), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 31 SHTDVRVPDFSDYRRAEVQDSTKSSKESSEARKGFSYLVTATTTVAAAYAAKNVVSQFVS 90
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKE++ E ++S LRDP
Sbjct: 91 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEVEQEAAVDVSHLRDP 150
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 151 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDYGGYYCPCHGSHYDASGRIRKGPAPLNL 210
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 211 EVPYYEFTSDDVVV 224
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 31 SHTDVRVPDFSDYRRAEVQDSTKSSKESSEARKGFSYLVTATTTVAAAYAAKNVVSQFVS 90
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 91 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 131
>gi|37811695|gb|AAR03846.1| rieske iron-sulfur protein [Tigriopus californicus]
Length = 204
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 140/188 (74%), Gaps = 4/188 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 74
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 134
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 135 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 194
Query: 178 MEVPPYQF 185
+EVP Y+F
Sbjct: 195 LEVPEYEF 202
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 74
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 116
>gi|291237628|ref|XP_002738733.1| PREDICTED: ubiquinol-cytochrome c reductase, Rieske iron-sulfur
polypeptide 1-like [Saccoglossus kowalevskii]
Length = 274
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 146/194 (75%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI+ PDFS YRR +P E + R+AFTY + G S VVG AK++V + +S
Sbjct: 79 AHTDIQYPDFSDYRRQPVSDPKTSSEPSSVSRRAFTYAMVGASGVVGAYAAKNIVQELLS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+MSASADVLA+A +EVDL I EG+S+ KWRGKPLF+RHRT EI+TE+ ++ LR
Sbjct: 139 TMSASADVLALAKVEVDLKTIAEGKSICVKWRGKPLFVRHRTGDEIETEKGVDVESLRHK 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+ D +RVK P WL++IG+CTHLGCVPIA+AG++GGY+CPCHGSHYD SGRIRKGPAP N+
Sbjct: 199 EHDDERVKRPEWLILIGVCTHLGCVPIAHAGEYGGYFCPCHGSHYDTSGRIRKGPAPENL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y F D+ ++
Sbjct: 259 EVPEYTFSDDTTVV 272
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 4/111 (3%)
Query: 186 GDEGILIRMLAHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVC 241
G G + AH+DI+ PDFS YRR +P E + R+AFTY + G S VVG
Sbjct: 69 GPHGPMQVRYAHTDIQYPDFSDYRRQPVSDPKTSSEPSSVSRRAFTYAMVGASGVVGAYA 128
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AK++V + +S+MSASADVLA+A +EVDL I EG+S+ KWRGKPLF+RHR
Sbjct: 129 AKNIVQELLSTMSASADVLALAKVEVDLKTIAEGKSICVKWRGKPLFVRHR 179
>gi|395318517|gb|AFN54358.1| rieske iron-sulfur protein, partial [Tigriopus californicus]
Length = 189
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 140/189 (74%), Gaps = 4/189 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRDP
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQFGD 187
EVP Y+F +
Sbjct: 181 EVPEYEFAE 189
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 101
>gi|37811693|gb|AAR03845.1| rieske iron-sulfur protein [Tigriopus californicus]
Length = 208
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 140/188 (74%), Gaps = 4/188 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVPPYQF 185
+EVP Y+F
Sbjct: 201 LEVPEYEF 208
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|395318513|gb|AFN54356.1| rieske iron-sulfur protein, partial [Tigriopus californicus]
Length = 187
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRDP
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQF 185
EVP Y+F
Sbjct: 181 EVPEYEF 187
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 101
>gi|225718980|gb|ACO15336.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Caligus clemensi]
Length = 276
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 150/193 (77%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD + PDF+ YRR D + RK F Y ++G ++VVG+ KS+V++F++S
Sbjct: 83 HSDAQVPDFTFYRRGATKDPTSVNNKNAANRKTFNYAVSGTAAVVGIYGGKSIVSKFVNS 142
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ +ADVLA+A IE+ + IPEG+++ FKWRGKP+F+RHRT EID E++ +++ LRDPQ
Sbjct: 143 MNPAADVLALAKIEIKITDIPEGKNMIFKWRGKPVFVRHRTATEIDAEKSVDLASLRDPQ 202
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DR +D WLV++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 203 TDTDRCQDEKWLVVVGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLNLE 262
Query: 180 VPPYQFGDEGILI 192
VP ++F ++ +++
Sbjct: 263 VPIHEFKEDILVV 275
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
+R L HSD + PDF+ YRR D + RK F Y ++G ++VVG+ KS+V+
Sbjct: 79 VRSL-HSDAQVPDFTFYRRGATKDPTSVNNKNAANRKTFNYAVSGTAAVVGIYGGKSIVS 137
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F++SM+ +ADVLA+A IE+ + IPEG+++ FKWRGKP+F+RHR
Sbjct: 138 KFVNSMNPAADVLALAKIEIKITDIPEGKNMIFKWRGKPVFVRHR 182
>gi|395318511|gb|AFN54355.1| rieske iron-sulfur protein, partial [Tigriopus californicus]
Length = 189
Score = 254 bits (649), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRDP
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQF 185
EVP Y+F
Sbjct: 181 EVPEYEF 187
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFIS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 101
>gi|251737745|gb|ACT10720.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737751|gb|ACT10723.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737759|gb|ACT10727.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737761|gb|ACT10728.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737765|gb|ACT10730.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737767|gb|ACT10731.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737771|gb|ACT10733.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737773|gb|ACT10734.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737775|gb|ACT10735.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 207
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 140/187 (74%), Gaps = 4/187 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVPPYQ 184
+EVP Y+
Sbjct: 201 LEVPEYE 207
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|395318515|gb|AFN54357.1| rieske iron-sulfur protein, partial [Tigriopus californicus]
Length = 189
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFIS 60
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRDP
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRDP 120
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 121 QTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLNL 180
Query: 179 EVPPYQF 185
EVP Y+F
Sbjct: 181 EVPEYEF 187
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FIS
Sbjct: 1 AHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFIS 60
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 61 NLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 101
>gi|251737777|gb|ACT10736.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737779|gb|ACT10737.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737781|gb|ACT10738.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737783|gb|ACT10739.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737785|gb|ACT10740.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737787|gb|ACT10741.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737791|gb|ACT10743.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 207
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVPPYQ 184
+EVP Y+
Sbjct: 201 LEVPEYE 207
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|251737755|gb|ACT10725.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737757|gb|ACT10726.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 206
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 139/186 (74%), Gaps = 4/186 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVPPY 183
+EVP Y
Sbjct: 201 LEVPEY 206
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|251737837|gb|ACT10766.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737839|gb|ACT10767.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 201
Score = 252 bits (644), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 74
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 134
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 135 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 194
Query: 178 MEVPPYQ 184
+EVP Y+
Sbjct: 195 LEVPEYE 201
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 74
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 116
>gi|251737793|gb|ACT10744.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737795|gb|ACT10745.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737797|gb|ACT10746.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737799|gb|ACT10747.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737801|gb|ACT10748.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737803|gb|ACT10749.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737805|gb|ACT10750.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737807|gb|ACT10751.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737811|gb|ACT10753.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737815|gb|ACT10755.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737817|gb|ACT10756.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737819|gb|ACT10757.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737821|gb|ACT10758.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737823|gb|ACT10759.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737825|gb|ACT10760.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737829|gb|ACT10762.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737833|gb|ACT10764.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 207
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/187 (59%), Positives = 139/187 (74%), Gaps = 4/187 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVPPYQ 184
+EVP Y+
Sbjct: 201 LEVPEYE 207
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|251737747|gb|ACT10721.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737749|gb|ACT10722.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 202
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 19 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 78
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 79 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 138
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 139 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 198
Query: 178 MEVP 181
+EVP
Sbjct: 199 LEVP 202
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 19 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 78
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 79 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 120
>gi|315258472|gb|ADT91770.1| ubiquinol-cytochrome c reductase [Spodoptera litura]
Length = 271
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI+ PDFS YRR D + + R++FTY+IAG V G AKS+V F+
Sbjct: 75 FAHTDIQYPDFSAYRRKETQDPTVKSAENVDGRQSFTYLIAGAGGVAGAYAAKSIVTHFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSM+A+ADVLA+A IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI TEQ + LRD
Sbjct: 135 SSMAAAADVLALAKIEIKLSEIPEGKSVTFKWRGKPLFIRHRTPNEISTEQAVPVDTLRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+ R +DP WLV+IG+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 195 PQHDNQRTQDPKWLVVIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+EVPP+ F DE +L+
Sbjct: 255 LEVPPHSFVDESLLV 269
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI+ PDFS YRR D + + R++FTY+IAG V G AKS+V F+
Sbjct: 75 FAHTDIQYPDFSAYRRKETQDPTVKSAENVDGRQSFTYLIAGAGGVAGAYAAKSIVTHFV 134
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSM+A+ADVLA+A IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 135 SSMAAAADVLALAKIEIKLSEIPEGKSVTFKWRGKPLFIRHR 176
>gi|37811699|gb|AAR03848.1| rieske iron-sulfur protein [Tigriopus californicus]
Length = 202
Score = 251 bits (641), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 19 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 78
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 79 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 138
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 139 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 198
Query: 178 MEVP 181
+EVP
Sbjct: 199 LEVP 202
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 19 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 78
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 79 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 120
>gi|326436784|gb|EGD82354.1| Rieske iron sulfur protein [Salpingoeca sp. ATCC 50818]
Length = 390
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 144/188 (76%), Gaps = 3/188 (1%)
Query: 2 LAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
AH I TP F Y+RD + D + + R+AFTY++ G +V + AKS+V F+ +M
Sbjct: 198 FAH--IETPSFDNYKRDDSGKDLREADYSRRAFTYLLGAGGAVASIHLAKSMVQDFLDTM 255
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
SASADVLA+A +EVDL+ IPEG++VTFKWRGKP+F+RHRTQKEID + +++ LR +
Sbjct: 256 SASADVLALAKMEVDLSAIPEGKNVTFKWRGKPVFVRHRTQKEIDEVRAVDVASLRHKET 315
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D +R P WLV++GICTHLGCVPIANAGD+GGY+CPCHGSHYDASGRIRKGPAP N+E+
Sbjct: 316 DQERAPKPEWLVVLGICTHLGCVPIANAGDFGGYFCPCHGSHYDASGRIRKGPAPENLEI 375
Query: 181 PPYQFGDE 188
P + F DE
Sbjct: 376 PQHTFIDE 383
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
AH I TP F Y+RD + D + + R+AFTY++ G +V + AKS+V F+ +M
Sbjct: 198 FAH--IETPSFDNYKRDDSGKDLREADYSRRAFTYLLGAGGAVASIHLAKSMVQDFLDTM 255
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SASADVLA+A +EVDL+ IPEG++VTFKWRGKP+F+RHR
Sbjct: 256 SASADVLALAKMEVDLSAIPEGKNVTFKWRGKPVFVRHR 294
>gi|251737789|gb|ACT10742.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 201
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 74
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 134
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 135 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 194
Query: 178 MEVP 181
+EVP
Sbjct: 195 LEVP 198
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 15 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 74
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 75 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 116
>gi|251737763|gb|ACT10729.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 204
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVP 181
+EVP
Sbjct: 201 LEVP 204
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|384484533|gb|EIE76713.1| cytochrome b-c1 complex subunit Rieske [Rhizopus delemar RA 99-880]
Length = 235
Score = 250 bits (638), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 109/192 (56%), Positives = 143/192 (74%), Gaps = 5/192 (2%)
Query: 1 MLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
M HS PDFSKY++ + + + F YM+ GG+ +V A++ V+ F+++M
Sbjct: 48 MRHHSTTSVPDFSKYKKTKTSGEAS-----RNFAYMMVGGTGLVSAAGAQATVSDFLANM 102
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
SASADVLA+A EVDL IPEG++VT KWRGKP+FIRHRT+ EI +IS+LRDPQ
Sbjct: 103 SASADVLALAKAEVDLASIPEGKNVTIKWRGKPVFIRHRTEAEIAEANQVSISELRDPQQ 162
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D++RVKDP WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGRIRKGPAP N+E+
Sbjct: 163 DAERVKDPKWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRIRKGPAPLNLEI 222
Query: 181 PPYQFGDEGILI 192
P Y F D+ +++
Sbjct: 223 PEYSFQDDKLIV 234
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+M HS PDFSKY++ + + + F YM+ GG+ +V A++ V+ F+++
Sbjct: 47 QMRHHSTTSVPDFSKYKKTKTSGEAS-----RNFAYMMVGGTGLVSAAGAQATVSDFLAN 101
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLA+A EVDL IPEG++VT KWRGKP+FIRHR
Sbjct: 102 MSASADVLALAKAEVDLASIPEGKNVTIKWRGKPVFIRHR 141
>gi|251737835|gb|ACT10765.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 205
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVP 181
+EVP
Sbjct: 201 LEVP 204
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|251737809|gb|ACT10752.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737813|gb|ACT10754.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737827|gb|ACT10761.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
gi|251737831|gb|ACT10763.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 204
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 111/184 (60%), Positives = 137/184 (74%), Gaps = 4/184 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEVP 181
+EVP
Sbjct: 201 LEVP 204
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG----QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTAKNRESHANRNGFAYLMTAGAAIPSVYGATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|387015390|gb|AFJ49814.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial-like
[Crotalus adamanteus]
Length = 274
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 145/195 (74%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD--KGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
H+D+ PDFS +RRD D K +E+ +R+ FTY G + ++ AK+ V F+
Sbjct: 78 FVHNDMVVPDFSYHRRDSVQDSTKSSQESGAERRVFTYFFNGATYLLAAYFAKNTVVMFV 137
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSM+ +ADVLA+A IE+ L+ I EG+++ F+WRGKPLF+RHRTQ EID +S+LRD
Sbjct: 138 SSMNPAADVLALAKIEIKLSDISEGRNMVFQWRGKPLFVRHRTQAEIDQVAKVPLSELRD 197
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK P WLV++GICTHLGCVPIA+AGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 198 PQHDLDRVKKPEWLVVLGICTHLGCVPIADAGDYGGYYCPCHGSHYDASGRIRKGPAPLN 257
Query: 178 MEVPPYQFGDEGILI 192
+EVP + F DE L+
Sbjct: 258 LEVPEHDFVDEDTLV 272
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 69/102 (67%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPD--KGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
H+D+ PDFS +RRD D K +E+ +R+ FTY G + ++ AK+ V F+
Sbjct: 78 FVHNDMVVPDFSYHRRDSVQDSTKSSQESGAERRVFTYFFNGATYLLAAYFAKNTVVMFV 137
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSM+ +ADVLA+A IE+ L+ I EG+++ F+WRGKPLF+RHR
Sbjct: 138 SSMNPAADVLALAKIEIKLSDISEGRNMVFQWRGKPLFVRHR 179
>gi|379067629|gb|AFC90194.1| rieske iron-sulfur protein of mitochondrial complex III [Spodoptera
exigua]
gi|379067631|gb|AFC90195.1| rieske iron-sulfur protein of mitochondrial complex III [Spodoptera
exigua]
Length = 271
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/195 (63%), Positives = 153/195 (78%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DI PDF+ YRR + P ET R++FTY+IAG V G AKS+V F+
Sbjct: 75 FAHTDIGYPDFTAYRRKETQEPTAKSAETVDGRQSFTYLIAGAGGVAGAYAAKSIVTHFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSM+A+ADVLA+A IE+ L+ IPEG+SVTFKWRGKPLFIRHRT+ EI TEQ + LRD
Sbjct: 135 SSMAAAADVLALAKIEIKLSEIPEGKSVTFKWRGKPLFIRHRTENEISTEQAVPVDTLRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D+ R ++P WLV+IG+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 195 PQHDNQRTQNPKWLVVIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+EVPP+ F ++G+L+
Sbjct: 255 LEVPPHSFVEDGLLV 269
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DI PDF+ YRR + P ET R++FTY+IAG V G AKS+V F+
Sbjct: 75 FAHTDIGYPDFTAYRRKETQEPTAKSAETVDGRQSFTYLIAGAGGVAGAYAAKSIVTHFV 134
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSM+A+ADVLA+A IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 135 SSMAAAADVLALAKIEIKLSEIPEGKSVTFKWRGKPLFIRHR 176
>gi|384498634|gb|EIE89125.1| cytochrome b-c1 complex subunit Rieske [Rhizopus delemar RA 99-880]
Length = 266
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 142/189 (75%), Gaps = 6/189 (3%)
Query: 4 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
HS PDFSKY++ +N + + F YM+ G + +V A++ V+ F+++MSAS
Sbjct: 82 HSTTSVPDFSKYKKTKNSGEAS-----RNFAYMMIGSTGLVSAAGAQATVSDFLANMSAS 136
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLA+A EV+L+ IPEG++VT KWRGKP+FIRHRT EID +I++LRDPQ D++
Sbjct: 137 ADVLALAKAEVELDAIPEGKNVTIKWRGKPVFIRHRTAAEIDEANQVSINELRDPQQDAE 196
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RVKDP WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 197 RVKDPQWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRIRKGPAPLNLEIPEY 256
Query: 184 QFGDEGILI 192
F EG LI
Sbjct: 257 NF-QEGKLI 264
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 76/117 (64%), Gaps = 11/117 (9%)
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSS 235
+N+ V P+ +++ HS PDFSKY++ +N + + F YM+ G +
Sbjct: 67 SNVNVGPFN------KLQLRLHSTTSVPDFSKYKKTKNSGEAS-----RNFAYMMIGSTG 115
Query: 236 VVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+V A++ V+ F+++MSASADVLA+A EV+L+ IPEG++VT KWRGKP+FIRHR
Sbjct: 116 LVSAAGAQATVSDFLANMSASADVLALAKAEVELDAIPEGKNVTIKWRGKPVFIRHR 172
>gi|251737769|gb|ACT10732.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 204
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 137/183 (74%), Gaps = 4/183 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEV 180
+EV
Sbjct: 201 LEV 203
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|251737753|gb|ACT10724.1| mitochondrial rieske iron-sulfur protein [Tigriopus californicus]
Length = 203
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 137/183 (74%), Gaps = 4/183 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHRT EIDTE + + LRD
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHRTSAEIDTENKVDATSLRD 140
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D +RVKDP +L++IG+CTHLGCVPIANAG +GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 141 PQTDEERVKDPKFLIVIGVCTHLGCVPIANAGQFGGYYCPCHGSHYDASGRIRKGPAPLN 200
Query: 178 MEV 180
+EV
Sbjct: 201 LEV 203
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
LAH+D+ PDF+ YRR D + + R F Y++ G+++ + A VN FI
Sbjct: 21 LAHTDMEVPDFTYYRRSSTKDSTANNRESHANRNGFAYLMTAGAAIPSVYAATKFVNVFI 80
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++S S DVLAMA IEV L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 81 SNLSPSRDVLAMAKIEVKLSDIPEGKNMTFKWRGKPLFVRHR 122
>gi|255720398|ref|XP_002556479.1| KLTH0H14344p [Lachancea thermotolerans]
gi|238942445|emb|CAR30617.1| KLTH0H14344p [Lachancea thermotolerans CBS 6340]
Length = 214
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 142/190 (74%), Gaps = 5/190 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A S RTPDF Y +++N + + +++ Y + G ++ V AKS V FIS+MSA
Sbjct: 29 AKSTYRTPDFGDYLKEKN-----DADKSRSYAYFMVGSLGLLSSVGAKSTVETFISTMSA 83
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EV+L IPEG++V KW+GKP+FIRHRTQ EID ++S L+DPQ DS
Sbjct: 84 SADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTQGEIDEANAVDMSALKDPQTDS 143
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK+P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 144 DRVKNPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPE 203
Query: 183 YQFGDEGILI 192
Y+F D +++
Sbjct: 204 YEFDDTKLIV 213
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A S RTPDF Y +++N + + +++ Y + G ++ V AKS V FIS+MSA
Sbjct: 29 AKSTYRTPDFGDYLKEKN-----DADKSRSYAYFMVGSLGLLSSVGAKSTVETFISTMSA 83
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 84 SADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 120
>gi|384495921|gb|EIE86412.1| Rieske Fe-S protein [Rhizopus delemar RA 99-880]
Length = 235
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 107/192 (55%), Positives = 143/192 (74%), Gaps = 5/192 (2%)
Query: 1 MLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
M HS PDFSKY++ +N + + F YM+ G + +V A++ V+ F+++M
Sbjct: 48 MRHHSTTSVPDFSKYKKTKNSGEAS-----RNFAYMMIGSTGLVSAAGAQATVSDFLANM 102
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
SASADVLA+A EV+L IPEG++VT KWRGKP+FIRHRT+ EI +I++LRDPQ
Sbjct: 103 SASADVLALAKAEVELASIPEGKNVTIKWRGKPVFIRHRTEAEIAEANQVSINELRDPQQ 162
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D++RVKDP WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGRIRKGPAP N+E+
Sbjct: 163 DAERVKDPKWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRIRKGPAPLNLEI 222
Query: 181 PPYQFGDEGILI 192
P Y F ++ ++I
Sbjct: 223 PEYNFQEDKLII 234
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 68/100 (68%), Gaps = 5/100 (5%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+M HS PDFSKY++ +N + + F YM+ G + +V A++ V+ F+++
Sbjct: 47 QMRHHSTTSVPDFSKYKKTKNSGEAS-----RNFAYMMIGSTGLVSAAGAQATVSDFLAN 101
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLA+A EV+L IPEG++VT KWRGKP+FIRHR
Sbjct: 102 MSASADVLALAKAEVELASIPEGKNVTIKWRGKPVFIRHR 141
>gi|358400473|gb|EHK49799.1| putative ubiquinol-cytochrome C reductase iron-sulfur subunit
[Trichoderma atroviride IMI 206040]
Length = 235
Score = 246 bits (629), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 136/185 (73%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY KG E T K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 55 KIPDFSKYM-----SKGSE-TSNKLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 108
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRTQ EID NI+ LRDPQ+D DRVK
Sbjct: 109 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHRTQDEIDQANKVNITSLRDPQSDEDRVKR 168
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 169 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPE 228
Query: 188 EGILI 192
+ LI
Sbjct: 229 DDKLI 233
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 62/92 (67%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY KG E T K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 55 KIPDFSKYM-----SKGSE-TSNKLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 108
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 109 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHR 140
>gi|320580719|gb|EFW94941.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Ogataea parapolymorpha DL-1]
Length = 217
Score = 246 bits (628), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 136/184 (73%), Gaps = 4/184 (2%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
+PDFS Y N KG + R +TY + G ++ AKS V F+++MSASADVLA
Sbjct: 36 SPDFSHYL---NKSKGTNDKSR-VYTYFMVGSYGLISAAAAKSTVEAFLTTMSASADVLA 91
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
MA +EV LN IPEG++V KW+GKP+FIRHRTQ EI +IS LRDPQ DSDRVK+P
Sbjct: 92 MAKVEVKLNAIPEGKNVVVKWQGKPVFIRHRTQAEIAEANEVDISSLRDPQKDSDRVKNP 151
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F DE
Sbjct: 152 EWLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYEFSDE 211
Query: 189 GILI 192
L+
Sbjct: 212 STLV 215
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
+PDFS Y N KG + R +TY + G ++ AKS V F+++MSASADVLA
Sbjct: 36 SPDFSHYL---NKSKGTNDKSR-VYTYFMVGSYGLISAAAAKSTVEAFLTTMSASADVLA 91
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MA +EV LN IPEG++V KW+GKP+FIRHR
Sbjct: 92 MAKVEVKLNAIPEGKNVVVKWQGKPVFIRHR 122
>gi|340521191|gb|EGR51426.1| ubiquinol cytochrome reductase [Trichoderma reesei QM6a]
Length = 236
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY N ET K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 56 QVPDFGKYMTKGN------ETTNKLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 109
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRTQ EI+ N++ LRDPQ D DRVK
Sbjct: 110 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHRTQDEIEQANKVNVASLRDPQTDEDRVKR 169
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 170 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPE 229
Query: 188 EGILI 192
+G L+
Sbjct: 230 DGKLV 234
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY N ET K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 56 QVPDFGKYMTKGN------ETTNKLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 109
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 110 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHR 141
>gi|167521714|ref|XP_001745195.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776153|gb|EDQ89773.1| predicted protein [Monosiga brevicollis MX1]
Length = 221
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 142/190 (74%), Gaps = 2/190 (1%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
AH D+ P F +R N D+ + + R+AFTY++ G ++ AKS+V F+ +MSA
Sbjct: 33 AHLDV--PSFEAVKRSDNGDQKEADYSRRAFTYLMGAGGAIATAQLAKSMVQDFLDTMSA 90
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EV+L+ IP G++VTFKWRGKP+F+RHR Q EID E ++ LR PQ+D+
Sbjct: 91 SADVLAMAKMEVNLDDIPVGKNVTFKWRGKPVFVRHRPQSEIDREAAVDVKSLRHPQSDA 150
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
+R P WLV++GICTHLGCVPIANAGD+ GY+CPCHGSHYDASGRIRKGPAP N+E+P
Sbjct: 151 ERATKPEWLVVLGICTHLGCVPIANAGDFHGYFCPCHGSHYDASGRIRKGPAPENLEIPE 210
Query: 183 YQFGDEGILI 192
+ F D ++I
Sbjct: 211 HSFEDNRLII 220
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 70/100 (70%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
R + ++ + P F +R N D+ + + R+AFTY++ G ++ AKS+V F+ +
Sbjct: 28 RQVRYAHLDVPSFEAVKRSDNGDQKEADYSRRAFTYLMGAGGAIATAQLAKSMVQDFLDT 87
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA +EV+L+ IP G++VTFKWRGKP+F+RHR
Sbjct: 88 MSASADVLAMAKMEVNLDDIPVGKNVTFKWRGKPVFVRHR 127
>gi|310796680|gb|EFQ32141.1| ubiquinol-cytochrome c reductase [Glomerella graminicola M1.001]
Length = 235
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A + + PDFSKY +P Q F Y + G + AKS V +F+ +MSA
Sbjct: 50 AQAGNKIPDFSKYMSKTSPATNQ------LFGYFMVGTMGAITAAGAKSTVQEFLVNMSA 103
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHRTQ EID +IS LRDPQAD
Sbjct: 104 SADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHRTQAEIDEANKVSISSLRDPQADE 163
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 164 DRVKNPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPE 223
Query: 183 YQFGDEGILI 192
Y F ++G L+
Sbjct: 224 YDFPEDGKLV 233
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 61/97 (62%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A + + PDFSKY +P Q F Y + G + AKS V +F+ +MSA
Sbjct: 50 AQAGNKIPDFSKYMSKTSPATNQ------LFGYFMVGTMGAITAAGAKSTVQEFLVNMSA 103
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHR
Sbjct: 104 SADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHR 140
>gi|358380496|gb|EHK18174.1| hypothetical protein TRIVIDRAFT_80807 [Trichoderma virens Gv29-8]
Length = 232
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY KG E T K F+Y G + AKS V +F+ +MSASADVL
Sbjct: 52 KIPDFSKYM-----SKGGE-TSNKLFSYFAVGTMGAITAAGAKSTVQEFLVNMSASADVL 105
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRTQ EID NI+ LRDPQ+D DRVK
Sbjct: 106 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHRTQDEIDQANKVNIASLRDPQSDEDRVKR 165
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 166 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPE 225
Query: 188 EGILI 192
+ LI
Sbjct: 226 DDKLI 230
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 61/92 (66%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY KG E T K F+Y G + AKS V +F+ +MSASADVL
Sbjct: 52 KIPDFSKYM-----SKGGE-TSNKLFSYFAVGTMGAITAAGAKSTVQEFLVNMSASADVL 105
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 106 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHR 137
>gi|322700870|gb|EFY92622.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Metarhizium
acridum CQMa 102]
Length = 233
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 132/183 (72%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF KY + E K F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 55 PDFGKYMSKKG------EGNNKLFSYFMVGTMGALSAAGAKSTVQEFLVNMSASADVLAM 108
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDLN IPEG++V KWRGKP+FIRHRTQ EID N++ LRDPQ D +RVK P
Sbjct: 109 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTQDEIDQANKVNVASLRDPQTDDERVKQPE 168
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +EG
Sbjct: 169 WLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPEEG 228
Query: 190 ILI 192
L+
Sbjct: 229 KLV 231
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF KY + E K F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 55 PDFGKYMSKKG------EGNNKLFSYFMVGTMGALSAAGAKSTVQEFLVNMSASADVLAM 108
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 109 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 138
>gi|322706593|gb|EFY98173.1| cytochrome c reductase iron-sulfur subunit [Metarhizium anisopliae
ARSEF 23]
Length = 233
Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 132/183 (72%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF KY + E K F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 55 PDFGKYMSKKG------EGNNKLFSYFMVGTMGALSAAGAKSTVQEFLVNMSASADVLAM 108
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDLN IPEG++V KWRGKP+FIRHRTQ EID N++ LRDPQ D +RVK P
Sbjct: 109 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTQDEIDQANKVNVASLRDPQTDDERVKQPE 168
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +EG
Sbjct: 169 WLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPEEG 228
Query: 190 ILI 192
L+
Sbjct: 229 KLV 231
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF KY + E K F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 55 PDFGKYMSKKG------EGNNKLFSYFMVGTMGALSAAGAKSTVQEFLVNMSASADVLAM 108
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 109 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 138
>gi|254568538|ref|XP_002491379.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031176|emb|CAY69099.1| hypothetical protein PAS_chr2-1_0850 [Komagataella pastoris GS115]
gi|328352108|emb|CCA38507.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Komagataella
pastoris CBS 7435]
Length = 214
Score = 243 bits (619), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 141/189 (74%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S+ +PDFS Y ++DRN DK ++ FTY + G ++ AKS V F+S+MSAS
Sbjct: 30 SNYDSPDFSHYLKKDRNADKTRD------FTYFMVGSFGLLSAAGAKSTVESFLSTMSAS 83
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV L IPEG++V KW+GKP+FIRHRTQ EI+ + +IS LRDPQ D+D
Sbjct: 84 ADVLAMAKVEVKLANIPEGKNVIVKWQGKPVFIRHRTQAEIEEANDIDISTLRDPQKDAD 143
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RVK+P WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y
Sbjct: 144 RVKNPEWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEY 203
Query: 184 QFGDEGILI 192
F D L+
Sbjct: 204 DFADPDTLV 212
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 66/96 (68%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S+ +PDFS Y ++DRN DK ++ FTY + G ++ AKS V F+S+MSAS
Sbjct: 30 SNYDSPDFSHYLKKDRNADKTRD------FTYFMVGSFGLLSAAGAKSTVESFLSTMSAS 83
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 84 ADVLAMAKVEVKLANIPEGKNVIVKWQGKPVFIRHR 119
>gi|389609843|dbj|BAM18533.1| rieske iron-sulfur protein [Papilio xuthus]
Length = 270
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 148/195 (75%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD---KGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AHSDI PDFS YRR D K +E R +FTY+IAG V G AKSVV F+
Sbjct: 75 FAHSDIAYPDFSAYRRKDTIDPKSKAKENVDTRNSFTYLIAGAGGVAGAYAAKSVVTHFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSM+A+ADVLA+A IEV+L IPEG+SVTFKWRGKPLFIRHRT EI TE+ + +LRD
Sbjct: 135 SSMAAAADVLALAKIEVNLAEIPEGKSVTFKWRGKPLFIRHRTPAEISTEKAVPLDELRD 194
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
P+ D R +P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 195 PEPDEKRATNPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 254
Query: 178 MEVPPYQFGDEGILI 192
+E+PPY F + +++
Sbjct: 255 LEIPPYDFVGDLLVV 269
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 73/102 (71%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRDRNPD---KGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AHSDI PDFS YRR D K +E R +FTY+IAG V G AKSVV F+
Sbjct: 75 FAHSDIAYPDFSAYRRKDTIDPKSKAKENVDTRNSFTYLIAGAGGVAGAYAAKSVVTHFV 134
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSM+A+ADVLA+A IEV+L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 135 SSMAAAADVLALAKIEVNLAEIPEGKSVTFKWRGKPLFIRHR 176
>gi|225718816|gb|ACO15254.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Caligus clemensi]
Length = 265
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 138/178 (77%), Gaps = 4/178 (2%)
Query: 4 HSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
HSD + PDF+ YRR D + RK F Y ++G ++VVG+ KS+V++F++S
Sbjct: 83 HSDAQVPDFTFYRRGATKDPTSVNNKNAANRKTFNYAVSGTAAVVGIYGGKSIVSKFVNS 142
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ +ADVLA+A IE+ + IPEG+++ FKWRGKP+F+RHRT EID E++ +++ LRDPQ
Sbjct: 143 MNPAADVLALAKIEIKITDIPEGKNMIFKWRGKPVFVRHRTATEIDAEKSVDLASLRDPQ 202
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
D+DR +D WLV++G+CTHLGCVPIANAG++GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 203 TDTDRCQDEKWLVVVGVCTHLGCVPIANAGEFGGYYCPCHGSHYDASGRIRKGPAPLN 260
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
+R L HSD + PDF+ YRR D + RK F Y ++G ++VVG+ KS+V+
Sbjct: 79 VRSL-HSDAQVPDFTFYRRGATKDPTSVNNKNAANRKTFNYAVSGTAAVVGIYGGKSIVS 137
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F++SM+ +ADVLA+A IE+ + IPEG+++ FKWRGKP+F+RHR
Sbjct: 138 KFVNSMNPAADVLALAKIEIKITDIPEGKNMIFKWRGKPVFVRHR 182
>gi|45190540|ref|NP_984794.1| AEL067Wp [Ashbya gossypii ATCC 10895]
gi|44983482|gb|AAS52618.1| AEL067Wp [Ashbya gossypii ATCC 10895]
gi|374108015|gb|AEY96922.1| FAEL067Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 139/190 (73%), Gaps = 5/190 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A S RTPDFS Y +++N + + +++ Y + G ++ AKS V+ FISSMSA
Sbjct: 27 AKSTYRTPDFSDYLKEKN-----DSNKGRSYAYFMVGSLGLLSSAGAKSTVDTFISSMSA 81
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EID +S L+DPQ D+
Sbjct: 82 SADVLAMAKVEVNLASIPEGKNVVVKWQGKPVFIRHRTASEIDEANGVQMSSLKDPQTDA 141
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P
Sbjct: 142 DRVKKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPA 201
Query: 183 YQFGDEGILI 192
Y F E ++I
Sbjct: 202 YDFDGEKLII 211
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A S RTPDFS Y +++N + + +++ Y + G ++ AKS V+ FISSMSA
Sbjct: 27 AKSTYRTPDFSDYLKEKN-----DSNKGRSYAYFMVGSLGLLSSAGAKSTVDTFISSMSA 81
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 82 SADVLAMAKVEVNLASIPEGKNVVVKWQGKPVFIRHR 118
>gi|363748406|ref|XP_003644421.1| hypothetical protein Ecym_1371 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888053|gb|AET37604.1| hypothetical protein Ecym_1371 [Eremothecium cymbalariae
DBVPG#7215]
Length = 212
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 111/191 (58%), Positives = 141/191 (73%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
A S RTPDFS Y +++N DKG +++ Y + G ++ AKS V FISSMS
Sbjct: 27 AKSTYRTPDFSDYLKEKNDADKG------RSYAYFMVGSLGLLSSTGAKSTVETFISSMS 80
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EI+ T +S L+DPQAD
Sbjct: 81 ASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTSSEIEEASVTALSALKDPQAD 140
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVK P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P
Sbjct: 141 ADRVKKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIP 200
Query: 182 PYQFGDEGILI 192
Y F + ++I
Sbjct: 201 QYDFDGDKLII 211
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
A S RTPDFS Y +++N DKG +++ Y + G ++ AKS V FISSMS
Sbjct: 27 AKSTYRTPDFSDYLKEKNDADKG------RSYAYFMVGSLGLLSSTGAKSTVETFISSMS 80
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 81 ASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 118
>gi|302423346|ref|XP_003009503.1| cytochrome b-c1 complex subunit Rieske [Verticillium albo-atrum
VaMs.102]
gi|261352649|gb|EEY15077.1| cytochrome b-c1 complex subunit Rieske [Verticillium albo-atrum
VaMs.102]
gi|346970654|gb|EGY14106.1| cytochrome b-c1 complex subunit Rieske [Verticillium dahliae
VdLs.17]
Length = 232
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 134/183 (73%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFSKY KG + F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 54 PDFSKYM-----SKGSG-AKNHLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVLAM 107
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDL+ IPEG++V KWRGKP+F+RHRTQ EID N++ LRDPQ DSDRVK P
Sbjct: 108 AKVEVDLSAIPEGKNVVIKWRGKPVFVRHRTQAEIDEANKINVASLRDPQNDSDRVKQPE 167
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +EG
Sbjct: 168 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYDFPEEG 227
Query: 190 ILI 192
L+
Sbjct: 228 KLV 230
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFSKY KG + F+Y + G + AKS V +F+ +MSASADVLAM
Sbjct: 54 PDFSKYM-----SKGSG-AKNHLFSYFMVGTMGAITAAGAKSTVQEFLVNMSASADVLAM 107
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDL+ IPEG++V KWRGKP+F+RHR
Sbjct: 108 AKVEVDLSAIPEGKNVVIKWRGKPVFVRHR 137
>gi|367044682|ref|XP_003652721.1| hypothetical protein THITE_2077933 [Thielavia terrestris NRRL 8126]
gi|346999983|gb|AEO66385.1| hypothetical protein THITE_2077933 [Thielavia terrestris NRRL 8126]
Length = 241
Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY KG + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 61 KVPDFSKYMA-----KGSSSSN-ALFSYFMVGALGAISAAGAKSTIQEFLVNMSASADVL 114
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ + N++ LRDPQ+D +RVK
Sbjct: 115 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTAAEIEEANSVNVASLRDPQSDEERVKK 174
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 175 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPQYDFPE 234
Query: 188 EGILI 192
EG L+
Sbjct: 235 EGKLV 239
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY KG + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 61 KVPDFSKYMA-----KGSSSSN-ALFSYFMVGALGAISAAGAKSTIQEFLVNMSASADVL 114
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 115 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 146
>gi|336263559|ref|XP_003346559.1| hypothetical protein SMAC_04732 [Sordaria macrospora k-hell]
gi|380090454|emb|CCC11750.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 312
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY KG T F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 132 KIPDFGKYM-----SKGSGSTNM-LFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 185
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRT EID N+S LRDPQAD+DRVK
Sbjct: 186 AMAKVEVDLASIPEGKNVIIKWRGKPVFIRHRTAAEIDEANQVNVSNLRDPQADADRVKK 245
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F +
Sbjct: 246 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPNYEFPE 305
Query: 188 EGILI 192
+G L+
Sbjct: 306 DGKLV 310
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY KG T F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 132 KIPDFGKYM-----SKGSGSTNM-LFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 185
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 186 AMAKVEVDLASIPEGKNVIIKWRGKPVFIRHR 217
>gi|380488196|emb|CCF37543.1| cytochrome b-c1 complex subunit Rieske [Colletotrichum
higginsianum]
Length = 235
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A + + PDFSKY KG + + F Y + G + AKS V +F+ +MSA
Sbjct: 50 AQAGNKIPDFSKYM-----SKGSA-SNNQLFGYFMVGTMGAITAAGAKSTVQEFLVNMSA 103
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHRTQ EID ++S LRDPQAD
Sbjct: 104 SADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHRTQAEIDEANKVSVSSLRDPQADE 163
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 164 DRVKTPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPE 223
Query: 183 YQFGDEGILI 192
Y F ++G L+
Sbjct: 224 YDFPEDGKLV 233
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 62/97 (63%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A + + PDFSKY KG + + F Y + G + AKS V +F+ +MSA
Sbjct: 50 AQAGNKIPDFSKYM-----SKGSA-SNNQLFGYFMVGTMGAITAAGAKSTVQEFLVNMSA 103
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHR
Sbjct: 104 SADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHR 140
>gi|260941099|ref|XP_002614716.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238851902|gb|EEQ41366.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 212
Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS Y +R G ++T K FTY + G ++ AKS V F+SSMSASADVL
Sbjct: 32 QQPDFSSYLSNR----GDQKT--KNFTYFMVGSMGLLSAAGAKSTVEAFLSSMSASADVL 85
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EV L IPEG +V KW+GKP+FIRHRTQ EID +I LRDPQ D DRVK
Sbjct: 86 AMAKVEVKLGAIPEGNNVIVKWQGKPVFIRHRTQDEIDEANQVDIKALRDPQTDDDRVKK 145
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y+F D
Sbjct: 146 PEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPQYEFSD 205
Query: 188 EGILI 192
E L+
Sbjct: 206 EETLL 210
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 61/92 (66%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS Y +R G ++T K FTY + G ++ AKS V F+SSMSASADVL
Sbjct: 32 QQPDFSSYLSNR----GDQKT--KNFTYFMVGSMGLLSAAGAKSTVEAFLSSMSASADVL 85
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EV L IPEG +V KW+GKP+FIRHR
Sbjct: 86 AMAKVEVKLGAIPEGNNVIVKWQGKPVFIRHR 117
>gi|336470790|gb|EGO58951.1| cytochrome b-c1 complex subunit Rieske, mitochondrial [Neurospora
tetrasperma FGSC 2508]
gi|350291856|gb|EGZ73051.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
[Neurospora tetrasperma FGSC 2509]
Length = 231
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ N++ LRDP+ D+DRVK
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVANLRDPETDADRVKK 164
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F +
Sbjct: 165 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPE 224
Query: 188 EGILI 192
EG L+
Sbjct: 225 EGKLV 229
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 136
>gi|85107305|ref|XP_962348.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
[Neurospora crassa OR74A]
gi|136704|sp|P07056.1|UCRI_NEUCR RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|3002|emb|CAA26308.1| cytochrome c reductase iron-sulfur subunit [Neurospora crassa]
gi|28923952|gb|EAA33112.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
[Neurospora crassa OR74A]
Length = 231
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ N++ LRDP+ D+DRVK
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKK 164
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F +
Sbjct: 165 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPE 224
Query: 188 EGILI 192
EG L+
Sbjct: 225 EGKLV 229
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 136
>gi|258573989|ref|XP_002541176.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Uncinocarpus
reesii 1704]
gi|237901442|gb|EEP75843.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Uncinocarpus
reesii 1704]
Length = 245
Score = 240 bits (612), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/188 (57%), Positives = 134/188 (71%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P+F KY RN T K F+Y +AG ++ V AK+ V F+ +MSASA
Sbjct: 62 STLKIPNFGKYASPRN------ATSNKVFSYFVAGSMGLITAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI +NTN LRDPQ DSDR
Sbjct: 116 DVLAQAKVEIGLNSIPEGKNVIIKWRGKPVFIRHRTASEIAEAENTNWEGLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 176 VKKPEWLVMLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYD 235
Query: 185 FGDEGILI 192
F E L+
Sbjct: 236 FPTEDTLV 243
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P+F KY RN T K F+Y +AG ++ V AK+ V F+ +MSASA
Sbjct: 62 STLKIPNFGKYASPRN------ATSNKVFSYFVAGSMGLITAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEIGLNSIPEGKNVIIKWRGKPVFIRHR 150
>gi|391342568|ref|XP_003745589.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Metaseiulus occidentalis]
Length = 272
Score = 240 bits (612), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 143/193 (74%), Gaps = 2/193 (1%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
LAH+D++ P+F YR D + K E++ +Y+ V G+ AK+ V F+ +
Sbjct: 78 LAHTDLKVPNFDHYRPDDRKTVTKNSRESKVSVGSYVAGAAVGVAGLYSAKNTVAFFVEA 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ASAD+LA+A IE+D+ IPEG++VTFKWRGKPLF+RHRT +EI E N+++LRDPQ
Sbjct: 138 MAASADILALAKIEIDVTSIPEGKNVTFKWRGKPLFVRHRTDEEIKREAAVNLAELRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
DSDR +P +LV++G+CTHLGCVPIANAG++GGYYCPCHGSHYD SGRIR GPAP N+E
Sbjct: 198 NDSDRTANPKFLVVLGVCTHLGCVPIANAGNYGGYYCPCHGSHYDGSGRIRLGPAPLNLE 257
Query: 180 VPPYQFGDEGILI 192
VP ++F + L+
Sbjct: 258 VPEHKFTSDTTLV 270
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
LAH+D++ P+F YR D + K E++ +Y+ V G+ AK+ V F+ +
Sbjct: 78 LAHTDLKVPNFDHYRPDDRKTVTKNSRESKVSVGSYVAGAAVGVAGLYSAKNTVAFFVEA 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ASAD+LA+A IE+D+ IPEG++VTFKWRGKPLF+RHR
Sbjct: 138 MAASADILALAKIEIDVTSIPEGKNVTFKWRGKPLFVRHR 177
>gi|367007499|ref|XP_003688479.1| hypothetical protein TPHA_0O00760 [Tetrapisispora phaffii CBS 4417]
gi|357526788|emb|CCE66045.1| hypothetical protein TPHA_0O00760 [Tetrapisispora phaffii CBS 4417]
Length = 212
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 108/189 (57%), Positives = 141/189 (74%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDF-SKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F S + DRN DK +++ Y + G ++ V AKS V F+SSMSAS
Sbjct: 29 SSYRTPNFGSNIKEDRNADKS------RSYAYFMVGSLGLLSSVGAKSTVETFVSSMSAS 82
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
+D+LAMA IEV+L IPEG++V KW+GKP+FIRHRT +EI + +IS L+DPQADSD
Sbjct: 83 SDILAMAKIEVNLAAIPEGKNVVVKWQGKPVFIRHRTSEEIKEANDIDISSLKDPQADSD 142
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV++P WLV++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 143 RVQNPEWLVMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPKY 202
Query: 184 QFGDEGILI 192
F E +++
Sbjct: 203 AFDGEKVIV 211
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 65/96 (67%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDF-SKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F S + DRN DK +++ Y + G ++ V AKS V F+SSMSAS
Sbjct: 29 SSYRTPNFGSNIKEDRNADKS------RSYAYFMVGSLGLLSSVGAKSTVETFVSSMSAS 82
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+D+LAMA IEV+L IPEG++V KW+GKP+FIRHR
Sbjct: 83 SDILAMAKIEVNLAAIPEGKNVVVKWQGKPVFIRHR 118
>gi|302894053|ref|XP_003045907.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726834|gb|EEU40194.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 234
Score = 239 bits (611), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P+F Y + E + K ++Y + G V AKS V +F+ +MSASADVL
Sbjct: 54 KIPNFGAYVSSGS------EGKNKLYSYFMVGALGAVSAAGAKSTVQEFLVNMSASADVL 107
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL+ IPEG++V KWRGKP+FIRHRTQ+EID NIS LRDP+ DS RVKD
Sbjct: 108 AMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHRTQEEIDLANKVNISALRDPEEDSARVKD 167
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 168 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPE 227
Query: 188 EGILI 192
+G L+
Sbjct: 228 DGKLV 232
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P+F Y + E + K ++Y + G V AKS V +F+ +MSASADVL
Sbjct: 54 KIPNFGAYVSSGS------EGKNKLYSYFMVGALGAVSAAGAKSTVQEFLVNMSASADVL 107
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL+ IPEG++V KWRGKP+FIRHR
Sbjct: 108 AMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHR 139
>gi|50289911|ref|XP_447387.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526697|emb|CAG60324.1| unnamed protein product [Candida glabrata]
Length = 213
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 137/188 (72%), Gaps = 5/188 (2%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S RTP+F RD Q + +++ Y + G ++ V AKS V F+SSMSASA
Sbjct: 30 STYRTPNFDDVLRDD-----QNSDKSRSYAYFMVGSLGLLSSVGAKSTVETFVSSMSASA 84
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EID ++S L+DPQ D+DR
Sbjct: 85 DVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTAHEIDEANAVDMSVLKDPQTDADR 144
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VKDP WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y+
Sbjct: 145 VKDPKWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPAYE 204
Query: 185 FGDEGILI 192
F E +++
Sbjct: 205 FDGEKLVV 212
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S RTP+F RD Q + +++ Y + G ++ V AKS V F+SSMSASA
Sbjct: 30 STYRTPNFDDVLRDD-----QNSDKSRSYAYFMVGSLGLLSSVGAKSTVETFVSSMSASA 84
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 85 DVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 119
>gi|119192644|ref|XP_001246928.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor (Rieske iron-sulfur protein) [Coccidioides
immitis RS]
gi|392863831|gb|EAS35402.2| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Coccidioides
immitis RS]
Length = 245
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 132/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY RN T K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 SSLKIPSFKKYASPRN------ATTNKVFSYFVAGSMGLVSAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRT EI ++TN LRDPQ DSDR
Sbjct: 116 DVLAQAKVEISLASIPEGKNVIIKWRGKPVFIRHRTASEIAEAESTNWESLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 176 VKKPEWLVMLGVCTHLGCVPIGEAGEFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYD 235
Query: 185 FGDEGILI 192
F E L+
Sbjct: 236 FPSEDTLV 243
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY RN T K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 SSLKIPSFKKYASPRN------ATTNKVFSYFVAGSMGLVSAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEISLASIPEGKNVIIKWRGKPVFIRHR 150
>gi|303312685|ref|XP_003066354.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106016|gb|EER24209.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320032283|gb|EFW14238.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Coccidioides
posadasii str. Silveira]
Length = 245
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 132/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY RN T K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 SSLKIPSFKKYASPRN------ATTNKVFSYFVAGSMGLVSAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRT EI ++TN LRDPQ DSDR
Sbjct: 116 DVLAQAKVEISLASIPEGKNVIIKWRGKPVFIRHRTASEIAEAESTNWETLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 176 VKKPEWLVMLGVCTHLGCVPIGEAGEFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYD 235
Query: 185 FGDEGILI 192
F E L+
Sbjct: 236 FPSEDTLV 243
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY RN T K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 SSLKIPSFKKYASPRN------ATTNKVFSYFVAGSMGLVSAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEISLASIPEGKNVIIKWRGKPVFIRHR 150
>gi|154309173|ref|XP_001553921.1| ubiquinol-cytochrome c reductase iron-sulphur subunit [Botryotinia
fuckeliana B05.10]
gi|347838159|emb|CCD52731.1| similar to ubiquinol-cytochrome c reductase iron-sulfur subunit
[Botryotinia fuckeliana]
Length = 227
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 130/183 (71%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFSKYR ++ + Y + G + AK+ V F+ +MSASADVLAM
Sbjct: 49 PDFSKYRSKKS------GGSNLVYQYFMVGAMGALTAAGAKATVQDFLVNMSASADVLAM 102
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDLN IPEG++V KWRGKP+FIRHRT EI +N + LRDPQAD+DRVK P
Sbjct: 103 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTADEIKEAENVKVETLRDPQADADRVKKPE 162
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E
Sbjct: 163 WLVMVGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYDFAEES 222
Query: 190 ILI 192
L+
Sbjct: 223 SLV 225
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFSKYR ++ + Y + G + AK+ V F+ +MSASADVLAM
Sbjct: 49 PDFSKYRSKKS------GGSNLVYQYFMVGAMGALTAAGAKATVQDFLVNMSASADVLAM 102
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 103 AKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 132
>gi|406604945|emb|CCH43618.1| Cytochrome b-c1 complex subunit [Wickerhamomyces ciferrii]
Length = 216
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 135/188 (71%), Gaps = 5/188 (2%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S RTPDF Y R + D + + FTY G ++ AKS V F+++MSASA
Sbjct: 33 STYRTPDFGDYVRPQGTDD-----KSRVFTYFTVGSLGLLSAAGAKSTVEAFLTTMSASA 87
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLAMA +EV L IPEG++V KW+GKP+FIRHRTQ EID +I+ LRDPQ DSDR
Sbjct: 88 DVLAMAKVEVGLAAIPEGKNVVVKWQGKPVFIRHRTQGEIDEANKVDINALRDPQQDSDR 147
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
++P WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P YQ
Sbjct: 148 AQNPEWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPQYQ 207
Query: 185 FGDEGILI 192
F + ++I
Sbjct: 208 FDGDNLVI 215
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S RTPDF Y R + D + + FTY G ++ AKS V F+++MSASA
Sbjct: 33 STYRTPDFGDYVRPQGTDD-----KSRVFTYFTVGSLGLLSAAGAKSTVEAFLTTMSASA 87
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 88 DVLAMAKVEVGLAAIPEGKNVVVKWQGKPVFIRHR 122
>gi|328848291|gb|EGF97522.1| hypothetical protein MELLADRAFT_41235 [Melampsora larici-populina
98AG31]
gi|328856430|gb|EGG05551.1| hypothetical protein MELLADRAFT_36650 [Melampsora larici-populina
98AG31]
Length = 190
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 103/179 (57%), Positives = 135/179 (75%), Gaps = 7/179 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PD+S YR E +AF+Y++ G ++ AKS+V+ F++++SASADVLA+
Sbjct: 16 PDYSAYRT-------STEDSGRAFSYLMVGSMGLITAAGAKSLVSDFLTNLSASADVLAL 68
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV+L IPEG++V KWRGKP+FIRHRT EID + IS LRDPQAD+DR+K P
Sbjct: 69 AKVEVELGNIPEGKNVIIKWRGKPVFIRHRTSSEIDEANSVEISSLRDPQADTDRIKKPE 128
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+EVP Y+F DE
Sbjct: 129 WLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLEVPSYEFNDE 187
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 62/90 (68%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PD+S YR E +AF+Y++ G ++ AKS+V+ F++++SASADVLA+
Sbjct: 16 PDYSAYRT-------STEDSGRAFSYLMVGSMGLITAAGAKSLVSDFLTNLSASADVLAL 68
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV+L IPEG++V KWRGKP+FIRHR
Sbjct: 69 AKVEVELGNIPEGKNVIIKWRGKPVFIRHR 98
>gi|367033705|ref|XP_003666135.1| hypothetical protein MYCTH_2316294 [Myceliophthora thermophila ATCC
42464]
gi|347013407|gb|AEO60890.1| hypothetical protein MYCTH_2316294 [Myceliophthora thermophila ATCC
42464]
Length = 230
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY KG + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 50 KVPDFSKYMA-----KGSSGSN-ALFSYFMVGSLGAISAAGAKSTIQEFLVNMSASADVL 103
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ + N++ LRDPQAD+DRVK
Sbjct: 104 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTAAEIEEANSVNVASLRDPQADADRVKK 163
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y D
Sbjct: 164 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTYDITD 223
Query: 188 EGILI 192
+ L+
Sbjct: 224 DNKLV 228
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY KG + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 50 KVPDFSKYMA-----KGSSGSN-ALFSYFMVGSLGAISAAGAKSTIQEFLVNMSASADVL 103
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 104 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 135
>gi|344234017|gb|EGV65887.1| ubiquinol-cytochrome c r [Candida tenuis ATCC 10573]
Length = 210
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 106/183 (57%), Positives = 132/183 (72%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS Y +R+ E+ + F Y + G ++ AKS V F+SSM+ASADVLAM
Sbjct: 32 PDFSSYLHNRS------ESTNRNFAYFMVGSMGLLSAAGAKSTVETFLSSMAASADVLAM 85
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV L IPEG++V KW+GKP+FIRHRT EID I+ LRDPQAD+DRVK P
Sbjct: 86 AKVEVKLGAIPEGKNVIVKWQGKPVFIRHRTASEIDEANAVEINGLRDPQADADRVKKPE 145
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F DE
Sbjct: 146 WLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFTDEE 205
Query: 190 ILI 192
L+
Sbjct: 206 TLL 208
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFS Y +R+ E+ + F Y + G ++ AKS V F+SSM+ASADVLAM
Sbjct: 32 PDFSSYLHNRS------ESTNRNFAYFMVGSMGLLSAAGAKSTVETFLSSMAASADVLAM 85
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 86 AKVEVKLGAIPEGKNVIVKWQGKPVFIRHR 115
>gi|46121745|ref|XP_385427.1| hypothetical protein FG05251.1 [Gibberella zeae PH-1]
gi|408393340|gb|EKJ72605.1| hypothetical protein FPSE_07242 [Fusarium pseudograminearum CS3096]
Length = 235
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 132/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY + E + K ++Y + G V AKS V +F+ +MSASADVL
Sbjct: 55 QIPDFGKYVSTGS------EGKNKLYSYFMVGALGAVSAAGAKSTVQEFLVNMSASADVL 108
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRTQ EID NIS LRDP+ DS R +
Sbjct: 109 AMAKVEVDLASIPEGKNVIIKWRGKPVFIRHRTQDEIDQANKVNISSLRDPEEDSARARQ 168
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 169 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFPE 228
Query: 188 EGILI 192
EG LI
Sbjct: 229 EGKLI 233
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY + E + K ++Y + G V AKS V +F+ +MSASADVL
Sbjct: 55 QIPDFGKYVSTGS------EGKNKLYSYFMVGALGAVSAAGAKSTVQEFLVNMSASADVL 108
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 109 AMAKVEVDLASIPEGKNVIIKWRGKPVFIRHR 140
>gi|367010748|ref|XP_003679875.1| hypothetical protein TDEL_0B05350 [Torulaspora delbrueckii]
gi|359747533|emb|CCE90664.1| hypothetical protein TDEL_0B05350 [Torulaspora delbrueckii]
Length = 217
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%), Gaps = 7/186 (3%)
Query: 3 AHSDIRTPDFS-KYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
A S RTP+F + D NPDK ++F Y + G ++ AKS V F+SSMS
Sbjct: 30 AKSTYRTPNFGDAVQDDINPDKS------RSFAYFMVGSLGLLSSAGAKSTVETFVSSMS 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EI + +IS L+DPQ D
Sbjct: 84 ASADVLAMAKVEVNLASIPEGKNVVVKWQGKPVFIRHRTAHEIQEANDIDISSLKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 203
Query: 182 PYQFGD 187
Y+F D
Sbjct: 204 QYEFED 209
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFS-KYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
A S RTP+F + D NPDK ++F Y + G ++ AKS V F+SSMS
Sbjct: 30 AKSTYRTPNFGDAVQDDINPDKS------RSFAYFMVGSLGLLSSAGAKSTVETFVSSMS 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 84 ASADVLAMAKVEVNLASIPEGKNVVVKWQGKPVFIRHR 121
>gi|448089866|ref|XP_004196923.1| Piso0_004153 [Millerozyma farinosa CBS 7064]
gi|448094221|ref|XP_004197954.1| Piso0_004153 [Millerozyma farinosa CBS 7064]
gi|359378345|emb|CCE84604.1| Piso0_004153 [Millerozyma farinosa CBS 7064]
gi|359379376|emb|CCE83573.1| Piso0_004153 [Millerozyma farinosa CBS 7064]
Length = 213
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 135/190 (71%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A S+ + PDFS Y R E + + FTY + G ++G AKS V F+SSMSA
Sbjct: 28 ALSNYQHPDFSGYLNKR------PEEKNRNFTYFMVGSMGLLGAAGAKSTVEAFLSSMSA 81
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EV L IPEG+++ KW+GKP+FIRHRT EI+ +I+ LRDPQ DS
Sbjct: 82 SADVLAMAKVEVKLGAIPEGKNIIVKWQGKPVFIRHRTPDEIEEANQVDITSLRDPQNDS 141
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRV P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP
Sbjct: 142 DRVVKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQ 201
Query: 183 YQFGDEGILI 192
Y F D+ L+
Sbjct: 202 YDFTDDETLL 211
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A S+ + PDFS Y R E + + FTY + G ++G AKS V F+SSMSA
Sbjct: 28 ALSNYQHPDFSGYLNKR------PEEKNRNFTYFMVGSMGLLGAAGAKSTVEAFLSSMSA 81
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EV L IPEG+++ KW+GKP+FIRHR
Sbjct: 82 SADVLAMAKVEVKLGAIPEGKNIIVKWQGKPVFIRHR 118
>gi|340377689|ref|XP_003387361.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Amphimedon queenslandica]
gi|340385683|ref|XP_003391338.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Amphimedon queenslandica]
Length = 220
Score = 237 bits (605), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 138/193 (71%), Gaps = 4/193 (2%)
Query: 4 HSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+R PDFS+YR++ D RKAFTY++ G V K+ V +++
Sbjct: 27 HNDLRPPDFSEYRKESTTDPKLPANDTILSRKAFTYLVLGSGGVATAYFGKNAVRGLLAT 86
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+ SADVLA+A IE+D+ IPEG++V FKWRGKPLF+RHRTQ+EI+ +N ++ LR PQ
Sbjct: 87 KNPSADVLALAKIEIDIASIPEGKNVVFKWRGKPLFVRHRTQQEIEDVRNVDVGSLRHPQ 146
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D +RV P WLV+IG CTHLGCVP+AN GD+GGY+CPCHGSHYDASGRIRKGPAP N+
Sbjct: 147 HDDERVVKPEWLVVIGSCTHLGCVPVANEGDFGGYFCPCHGSHYDASGRIRKGPAPENLA 206
Query: 180 VPPYQFGDEGILI 192
VP Y F + +++
Sbjct: 207 VPEYVFNGDQLVV 219
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+R PDFS+YR++ D RKAFTY++ G V K+ V +++
Sbjct: 27 HNDLRPPDFSEYRKESTTDPKLPANDTILSRKAFTYLVLGSGGVATAYFGKNAVRGLLAT 86
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ SADVLA+A IE+D+ IPEG++V FKWRGKPLF+RHR
Sbjct: 87 KNPSADVLALAKIEIDIASIPEGKNVVFKWRGKPLFVRHR 126
>gi|389629926|ref|XP_003712616.1| cytochrome b-c1 complex subunit Rieske [Magnaporthe oryzae 70-15]
gi|351644948|gb|EHA52809.1| cytochrome b-c1 complex subunit Rieske [Magnaporthe oryzae 70-15]
gi|440464738|gb|ELQ34109.1| cytochrome b-c1 complex subunit Rieske [Magnaporthe oryzae Y34]
gi|440487048|gb|ELQ66856.1| cytochrome b-c1 complex subunit Rieske [Magnaporthe oryzae P131]
Length = 236
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 5/185 (2%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY + T F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 55 QIPDFKKYMAPKG-----SSTSNAVFSYFMVGAMGAISAAGAKSTVQEFLVNMSASADVL 109
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRT +EID +++ LRDP+ADSDRVK
Sbjct: 110 AMAKVEVDLTTIPEGKNVIIKWRGKPVFIRHRTGREIDEANKIDVASLRDPEADSDRVKK 169
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 170 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 229
Query: 188 EGILI 192
+ L+
Sbjct: 230 DDKLV 234
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 57/92 (61%), Gaps = 5/92 (5%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY + T F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 55 QIPDFKKYMAPKG-----SSTSNAVFSYFMVGAMGAISAAGAKSTVQEFLVNMSASADVL 109
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 110 AMAKVEVDLTTIPEGKNVIIKWRGKPVFIRHR 141
>gi|344301310|gb|EGW31622.1| hypothetical protein SPAPADRAFT_72393 [Spathaspora passalidarum
NRRL Y-27907]
Length = 213
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 134/187 (71%), Gaps = 6/187 (3%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ + PD+S Y +++ D + F Y + G ++ AKS V F+SSM+ASAD
Sbjct: 31 NYQHPDYSSYLNNKSQDSSRN------FAYFMVGSMGLLSAAGAKSTVETFLSSMAASAD 84
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EV L IPEG++V KW+GKP+FIRHRT EI+ +IS LRDPQ DSDRV
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHRTADEIEEANKVDISSLRDPQNDSDRV 144
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P WLV++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y+F
Sbjct: 145 KKPEWLVMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYEF 204
Query: 186 GDEGILI 192
DE LI
Sbjct: 205 ADEETLI 211
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 6/94 (6%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ + PD+S Y +++ D + F Y + G ++ AKS V F+SSM+ASAD
Sbjct: 31 NYQHPDYSSYLNNKSQDSSRN------FAYFMVGSMGLLSAAGAKSTVETFLSSMAASAD 84
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHR 118
>gi|358058499|dbj|GAA95462.1| hypothetical protein E5Q_02116 [Mixia osmundae IAM 14324]
Length = 324
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 137/192 (71%), Gaps = 6/192 (3%)
Query: 1 MLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
M A S PDFS Y KG E +AF+Y + G ++ AKS+V+ F+++M
Sbjct: 137 MNAQSTASVPDFSHY------TKGNTEASGRAFSYFMVGTFGLLTAAGAKSLVSDFLANM 190
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
+ASADVLA+A +E+ + IPEG++V KWRGKP+FIRHRT EI+ ++ LRDPQ
Sbjct: 191 AASADVLALAKVEIAMGDIPEGKNVLIKWRGKPVFIRHRTPAEIEEANAVDVKSLRDPQK 250
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
DSDR + P WLV+IG+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR+R+GPAP N+EV
Sbjct: 251 DSDRTQKPEWLVMIGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRVRRGPAPLNLEV 310
Query: 181 PPYQFGDEGILI 192
P Y FGD+ +L+
Sbjct: 311 PEYSFGDDDMLV 322
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Query: 194 MLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
M A S PDFS Y KG E +AF+Y + G ++ AKS+V+ F+++M
Sbjct: 137 MNAQSTASVPDFSHY------TKGNTEASGRAFSYFMVGTFGLLTAAGAKSLVSDFLANM 190
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ASADVLA+A +E+ + IPEG++V KWRGKP+FIRHR
Sbjct: 191 AASADVLALAKVEIAMGDIPEGKNVLIKWRGKPVFIRHR 229
>gi|171691146|ref|XP_001910498.1| hypothetical protein [Podospora anserina S mat+]
gi|170945521|emb|CAP71633.1| unnamed protein product [Podospora anserina S mat+]
Length = 228
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 135/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY D+ P + +Y + G + AKS + +F+ +MSASADVL
Sbjct: 48 KVPDFSKYLSDKKP------SSNALISYFMVGTLGAITAGGAKSTIQEFLVNMSASADVL 101
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
+A +EVDLN IPEG++V KWRGKP+FIRHRT EI+ N N++ LRDP+ADSDRV+
Sbjct: 102 VLAKVEVDLNAIPEGKNVIVKWRGKPVFIRHRTAAEIEEANNINVASLRDPEADSDRVQK 161
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F +
Sbjct: 162 PEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYEFPE 221
Query: 188 EGILI 192
+ L+
Sbjct: 222 DDKLV 226
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY D+ P + +Y + G + AKS + +F+ +MSASADVL
Sbjct: 48 KVPDFSKYLSDKKP------SSNALISYFMVGTLGAITAGGAKSTIQEFLVNMSASADVL 101
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 102 VLAKVEVDLNAIPEGKNVIVKWRGKPVFIRHR 133
>gi|440640728|gb|ELR10647.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Geomyces
destructans 20631-21]
Length = 239
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 128/185 (69%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKYR + F Y + G + AKS V F+ +MSASADVL
Sbjct: 59 KIPDFSKYRSK------NATSSNLMFQYFMVGSMGAITAAGAKSTVQDFLVNMSASADVL 112
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRT EI ++ I LRDPQ D+DRVK
Sbjct: 113 AMAKVEVDLAAIPEGKNVLIKWRGKPVFIRHRTADEIKEAEDIKIESLRDPQQDADRVKK 172
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV+IG+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F D
Sbjct: 173 PEWLVMIGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFAD 232
Query: 188 EGILI 192
E L+
Sbjct: 233 ETNLV 237
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKYR + F Y + G + AKS V F+ +MSASADVL
Sbjct: 59 KIPDFSKYRSK------NATSSNLMFQYFMVGSMGAITAAGAKSTVQDFLVNMSASADVL 112
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 113 AMAKVEVDLAAIPEGKNVLIKWRGKPVFIRHR 144
>gi|345564133|gb|EGX47114.1| hypothetical protein AOL_s00097g160 [Arthrobotrys oligospora ATCC
24927]
Length = 231
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 131/183 (71%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFSKY+ ++ ET K F Y + G + AK+ V F+ +MSASADVLAM
Sbjct: 53 PDFSKYKSKKS------ETSNKVFGYFMVGTLGALSATSAKATVQDFLVNMSASADVLAM 106
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV L+ IPEG++V KWRGKP+F+RHRT EI+ N NIS LR P+ D +RVK P
Sbjct: 107 AKVEVALSSIPEGKNVVIKWRGKPVFVRHRTSDEIEEANNVNISSLRHPETDDERVKKPE 166
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F D+
Sbjct: 167 WLVMVGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPDDD 226
Query: 190 ILI 192
L+
Sbjct: 227 TLV 229
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFSKY+ ++ ET K F Y + G + AK+ V F+ +MSASADVLAM
Sbjct: 53 PDFSKYKSKKS------ETSNKVFGYFMVGTLGALSATSAKATVQDFLVNMSASADVLAM 106
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV L+ IPEG++V KWRGKP+F+RHR
Sbjct: 107 AKVEVALSSIPEGKNVVIKWRGKPVFVRHR 136
>gi|50309919|ref|XP_454973.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644108|emb|CAH00060.1| KLLA0E22573p [Kluyveromyces lactis]
Length = 213
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 139/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
A S RTPDF Y ++ N DKG +++ Y + G ++ AKS V FI+SMS
Sbjct: 28 AKSTYRTPDFGDYIKENNDADKG------RSYAYFMVGSLGLLSSAGAKSTVETFIASMS 81
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 82 ASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTDHEIQEANSVDMSALKDPQTD 141
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
SDRV+ P WLV++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 142 SDRVQKPEWLVMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 201
Query: 182 PYQFGDEGILI 192
Y+F E +++
Sbjct: 202 QYEFDGENLIV 212
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
A S RTPDF Y ++ N DKG +++ Y + G ++ AKS V FI+SMS
Sbjct: 28 AKSTYRTPDFGDYIKENNDADKG------RSYAYFMVGSLGLLSSAGAKSTVETFIASMS 81
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 82 ASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 119
>gi|145249386|ref|XP_001401032.1| cytochrome b-c1 complex subunit Rieske [Aspergillus niger CBS
513.88]
gi|134081710|emb|CAK46644.1| unnamed protein product [Aspergillus niger]
gi|350639497|gb|EHA27851.1| hypothetical protein ASPNIDRAFT_211145 [Aspergillus niger ATCC
1015]
gi|358374192|dbj|GAA90786.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus kawachii IFO 4308]
Length = 238
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 132/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ PDFSKY+ + P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 55 STLKIPDFSKYQSKKPPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 108
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EI Q T LRDPQAD DR
Sbjct: 109 DVLAQAKVEIGLGAIPEGKNVIIKWRGKPVFIRHRTQDEIQEAQKTEWQSLRDPQADEDR 168
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 169 VQKPEWLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYN 228
Query: 185 FGDEGILI 192
F E L+
Sbjct: 229 FPSEDTLV 236
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ PDFSKY+ + P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 55 STLKIPDFSKYQSKKPPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 108
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 109 DVLAQAKVEIGLGAIPEGKNVIIKWRGKPVFIRHR 143
>gi|340960603|gb|EGS21784.1| hypothetical protein CTHT_0036520 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 235
Score = 236 bits (602), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 130/182 (71%), Gaps = 6/182 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
R PDFSKY+ + TQ +Y + G + AKS V +F+ +MSASADVL
Sbjct: 54 RIPDFSKYKTSGS------STQNALISYFMVGTLGAISAAGAKSTVQEFLVNMSASADVL 107
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRTQ EID + N++ LR P+ D RVK
Sbjct: 108 AMAKVEVDLAAIPEGKNVIIKWRGKPVFIRHRTQAEIDEANSVNVASLRHPETDDQRVKK 167
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 168 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDFSE 227
Query: 188 EG 189
+G
Sbjct: 228 DG 229
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
R PDFSKY+ + TQ +Y + G + AKS V +F+ +MSASADVL
Sbjct: 54 RIPDFSKYKTSGS------STQNALISYFMVGTLGAISAAGAKSTVQEFLVNMSASADVL 107
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 108 AMAKVEVDLAAIPEGKNVIIKWRGKPVFIRHR 139
>gi|343424899|emb|CBQ68437.1| probable ubiquinol-cytochrome-c reductase Rieske iron-sulfur
protein [Sporisorium reilianum SRZ2]
Length = 285
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS YR + KAF+Y + G +V AK+ V+ F++SM AS+DVL
Sbjct: 105 QVPDFSGYRT-------KSTDSNKAFSYFMVGSMGLVAASGAKATVSDFLASMGASSDVL 157
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +EVD+N IPEG++ KWRGKP+F+RHRTQ EID +IS+LRDPQ DSDR K
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHRTQGEIDEANAVDISKLRDPQKDSDRTKR 217
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR RKGPAP N+EVP Y F D
Sbjct: 218 PEWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRARKGPAPLNLEVPEYDFND 277
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS YR + KAF+Y + G +V AK+ V+ F++SM AS+DVL
Sbjct: 105 QVPDFSGYRT-------KSTDSNKAFSYFMVGSMGLVAASGAKATVSDFLASMGASSDVL 157
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A +EVD+N IPEG++ KWRGKP+F+RHR
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHR 189
>gi|71019483|ref|XP_759972.1| hypothetical protein UM03825.1 [Ustilago maydis 521]
gi|46099478|gb|EAK84711.1| hypothetical protein UM03825.1 [Ustilago maydis 521]
Length = 411
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 104/180 (57%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS YR + KAF+Y + G ++ AK+ V+ F+SSM AS+DVL
Sbjct: 231 QVPDFSAYRT-------KSTDSNKAFSYFMVGSMGLIAASGAKATVSDFLSSMGASSDVL 283
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +EVD+N IPEG++ KWRGKP+F+RHRT+ EID +IS+LRDPQ DSDR K
Sbjct: 284 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHRTKDEIDEANAVDISKLRDPQKDSDRAKR 343
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR RKGPAP N+EVP Y F D
Sbjct: 344 PEWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRARKGPAPLNLEVPEYDFND 403
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS YR + KAF+Y + G ++ AK+ V+ F+SSM AS+DVL
Sbjct: 231 QVPDFSAYRT-------KSTDSNKAFSYFMVGSMGLIAASGAKATVSDFLSSMGASSDVL 283
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A +EVD+N IPEG++ KWRGKP+F+RHR
Sbjct: 284 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHR 315
>gi|430814444|emb|CCJ28314.1| unnamed protein product [Pneumocystis jirovecii]
Length = 216
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 137/189 (72%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S R PDFS Y+ + +AF+Y + G +V A++ + F+S+MSASA
Sbjct: 33 STTRIPDFSNYKSE------SSLAVNRAFSYFMVGTFGMVAAAGAQATITDFLSNMSASA 86
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLAMA +EVDL+ +PEG+++ KWRGKP+FIRHRTQ EID ++ NIS LRDPQ+D DR
Sbjct: 87 DVLAMAKVEVDLSNLPEGKNLIIKWRGKPVFIRHRTQDEIDEARSVNISSLRDPQSDDDR 146
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
K P WLV+IG+CTHLGCVPI AGD+ G++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 147 TKRPEWLVMIGVCTHLGCVPIGEAGDYRGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYD 206
Query: 185 F-GDEGILI 192
F D+ ++I
Sbjct: 207 FLSDDKLVI 215
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S R PDFS Y+ + +AF+Y + G +V A++ + F+S+MSASA
Sbjct: 33 STTRIPDFSNYKSE------SSLAVNRAFSYFMVGTFGMVAAAGAQATITDFLSNMSASA 86
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLAMA +EVDL+ +PEG+++ KWRGKP+FIRHR
Sbjct: 87 DVLAMAKVEVDLSNLPEGKNLIIKWRGKPVFIRHR 121
>gi|255726162|ref|XP_002548007.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
gi|240133931|gb|EER33486.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Candida tropicalis MYA-3404]
Length = 213
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 133/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S+ + PDFS Y +++P + FTY + G ++ AKS V F+S+ +ASA
Sbjct: 30 SNYQQPDFSSYLNNKSPQSSRN------FTYFMVGSMGLLSAAGAKSTVESFLSTFAASA 83
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLAMA +EV L IPEG++V KW+GKP+FIRHRT EI+ +I LRDPQ D+DR
Sbjct: 84 DVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHRTPDEIEEANQVDIKALRDPQTDADR 143
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 144 VKKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYV 203
Query: 185 FGDEGILI 192
F D+ L+
Sbjct: 204 FSDDETLV 211
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S+ + PDFS Y +++P + FTY + G ++ AKS V F+S+ +ASA
Sbjct: 30 SNYQQPDFSSYLNNKSPQSSRN------FTYFMVGSMGLLSAAGAKSTVESFLSTFAASA 83
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 84 DVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHR 118
>gi|261188620|ref|XP_002620724.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
dermatitidis SLH14081]
gi|239593082|gb|EEQ75663.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
dermatitidis SLH14081]
gi|239606232|gb|EEQ83219.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
dermatitidis ER-3]
gi|327355989|gb|EGE84846.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 249
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 133/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY E+ K F+Y +AG +V V AK+ V+ F+ +MSASA
Sbjct: 66 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVHDFLVNMSASA 119
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI +N LRDPQAD+DR
Sbjct: 120 DVLAQAKVEIALNAIPEGKNVIIKWRGKPVFIRHRTADEIQEAENMKWEDLRDPQADADR 179
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVPPY
Sbjct: 180 VQKPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYT 239
Query: 185 FGDEGILI 192
F + L+
Sbjct: 240 FPTDDSLV 247
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY E+ K F+Y +AG +V V AK+ V+ F+ +MSASA
Sbjct: 66 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVHDFLVNMSASA 119
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 120 DVLAQAKVEIALNAIPEGKNVIIKWRGKPVFIRHR 154
>gi|295670087|ref|XP_002795591.1| cytochrome b-c1 complex subunit Rieske [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284676|gb|EEH40242.1| cytochrome b-c1 complex subunit Rieske [Paracoccidioides sp.
'lutzii' Pb01]
Length = 250
Score = 234 bits (597), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 135/188 (71%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 67 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 120
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT E+ +NT LRDPQ DSDR
Sbjct: 121 DVLAQAKVEISLSAIPEGKNVIIKWRGKPVFIRHRTPSEVQEAENTKWETLRDPQPDSDR 180
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 181 VKNPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTYS 240
Query: 185 FGDEGILI 192
F E L+
Sbjct: 241 FPTENTLL 248
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 67 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 120
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 121 DVLAQAKVEISLSAIPEGKNVIIKWRGKPVFIRHR 155
>gi|410079541|ref|XP_003957351.1| hypothetical protein KAFR_0E00620 [Kazachstania africana CBS 2517]
gi|372463937|emb|CCF58216.1| hypothetical protein KAFR_0E00620 [Kazachstania africana CBS 2517]
Length = 220
Score = 234 bits (597), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/192 (54%), Positives = 141/192 (73%), Gaps = 7/192 (3%)
Query: 2 LAHSDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
L S RTPDF + +RN DK + +TY + G ++ AKS V FISSM
Sbjct: 34 LGKSTYRTPDFGNVIKEERNSDKS------RIYTYFMVGSLGLLSSAGAKSTVETFISSM 87
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
SASADVLAMA +EV+L IPEG++V KW+GKP+FIRHRT EI+ + +++ L+DPQ
Sbjct: 88 SASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTPHEINEANSVDMTSLKDPQP 147
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
DSDRV++P WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP+N+E+
Sbjct: 148 DSDRVQNPEWLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPSNLEI 207
Query: 181 PPYQFGDEGILI 192
P Y+F + +++
Sbjct: 208 PQYEFDGDKLVV 219
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 195 LAHSDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
L S RTPDF + +RN DK + +TY + G ++ AKS V FISSM
Sbjct: 34 LGKSTYRTPDFGNVIKEERNSDKS------RIYTYFMVGSLGLLSSAGAKSTVETFISSM 87
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SASADVLAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 88 SASADVLAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 126
>gi|444319132|ref|XP_004180223.1| hypothetical protein TBLA_0D01970 [Tetrapisispora blattae CBS 6284]
gi|387513265|emb|CCH60704.1| hypothetical protein TBLA_0D01970 [Tetrapisispora blattae CBS 6284]
Length = 199
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 140/189 (74%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFS-KYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S +TPDF ++D++ DKG +++ Y + G ++ KS V F+ SMSAS
Sbjct: 16 STYKTPDFGDAVKKDKSTDKG------RSYAYFMIGSLGMLSAAGGKSTVETFLGSMSAS 69
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IPEG++ KW+GKP+FIRHRT EI+ +I+ L+DPQAD+D
Sbjct: 70 ADVLAMAKVEVNLASIPEGKNAVVKWQGKPVFIRHRTAHEIEEANQVDITSLKDPQADAD 129
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RVK+PSWLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 130 RVKNPSWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTY 189
Query: 184 QFGDEGILI 192
+F D+ +++
Sbjct: 190 EFQDDTLIV 198
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFS-KYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S +TPDF ++D++ DKG +++ Y + G ++ KS V F+ SMSAS
Sbjct: 16 STYKTPDFGDAVKKDKSTDKG------RSYAYFMIGSLGMLSAAGGKSTVETFLGSMSAS 69
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IPEG++ KW+GKP+FIRHR
Sbjct: 70 ADVLAMAKVEVNLASIPEGKNAVVKWQGKPVFIRHR 105
>gi|225684306|gb|EEH22590.1| cytochrome b-c1 complex subunit Rieske [Paracoccidioides
brasiliensis Pb03]
Length = 468
Score = 234 bits (596), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 135/188 (71%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 285 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 338
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI ++T LRDPQ DSDR
Sbjct: 339 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPSEIQEAESTKWETLRDPQPDSDR 398
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 399 VKNPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTYS 458
Query: 185 FGDEGILI 192
F E L+
Sbjct: 459 FPTESTLL 466
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 285 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 338
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 339 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 373
>gi|240274861|gb|EER38376.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
capsulatus H143]
Length = 245
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI +N LRDPQ DSDR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPDEIQEAENAKWESLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVPPY
Sbjct: 176 VQKPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYS 235
Query: 185 FGDEGILI 192
F E LI
Sbjct: 236 FPTEESLI 243
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 150
>gi|156049877|ref|XP_001590905.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154693044|gb|EDN92782.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 227
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 129/185 (69%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKYR ++ + Y + G + AK+ V F+ +MSASADVL
Sbjct: 47 KIPDFSKYRSKKS------GGSNLVYQYFMVGAMGALTAAGAKATVQDFLVNMSASADVL 100
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRT EI N + LRDPQ+D+DRVK
Sbjct: 101 AMAKVEVDLAAIPEGKNVIIKWRGKPVFIRHRTADEIKEAGNVKVESLRDPQSDADRVKK 160
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +
Sbjct: 161 PEWLVMVGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYDFAE 220
Query: 188 EGILI 192
E L+
Sbjct: 221 ENSLV 225
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 57/92 (61%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKYR ++ + Y + G + AK+ V F+ +MSASADVL
Sbjct: 47 KIPDFSKYRSKKS------GGSNLVYQYFMVGAMGALTAAGAKATVQDFLVNMSASADVL 100
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 101 AMAKVEVDLAAIPEGKNVIIKWRGKPVFIRHR 132
>gi|115401296|ref|XP_001216236.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
gi|114190177|gb|EAU31877.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Aspergillus terreus NIH2624]
Length = 236
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + PDFSKY+ R P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 53 STAKIPDFSKYQSKRAPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 106
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EI ++ LRDPQ DSDR
Sbjct: 107 DVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHRTQDEIKEAEDIEWQSLRDPQPDSDR 166
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 167 VQKPEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYN 226
Query: 185 FGDEGILI 192
F E L+
Sbjct: 227 FPSEETLV 234
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + PDFSKY+ R P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 53 STAKIPDFSKYQSKRAPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 106
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 107 DVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHR 141
>gi|325094213|gb|EGC47523.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
capsulatus H88]
Length = 245
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI +N LRDPQ DSDR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPDEIQEAENAKWESLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVPPY
Sbjct: 176 VQKPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYS 235
Query: 185 FGDEGILI 192
F E LI
Sbjct: 236 FPTEESLI 243
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 150
>gi|225558428|gb|EEH06712.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Ajellomyces
capsulatus G186AR]
Length = 245
Score = 233 bits (595), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI +N LRDPQ DSDR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPDEIQEAENAKWESLRDPQPDSDR 175
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVPPY
Sbjct: 176 VQKPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYS 235
Query: 185 FGDEGILI 192
F E LI
Sbjct: 236 FPTEESLI 243
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 62 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 115
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 116 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 150
>gi|402083317|gb|EJT78335.1| cytochrome b-c1 complex subunit Rieske [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 241
Score = 233 bits (594), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 133/185 (71%), Gaps = 5/185 (2%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PD+SKY ++ +T + F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 60 KIPDWSKYLAPKS-----SQTANQVFSYFMVGTMGAISAAGAKSTVQEFLVNMSASADVL 114
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ ++ LRDPQ D DRV+
Sbjct: 115 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHRTPSEIEEANKVDVKALRDPQTDDDRVQK 174
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 175 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 234
Query: 188 EGILI 192
+ LI
Sbjct: 235 DDKLI 239
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PD+SKY ++ +T + F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 60 KIPDWSKYLAPKS-----SQTANQVFSYFMVGTMGAISAAGAKSTVQEFLVNMSASADVL 114
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 115 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHR 146
>gi|146423124|ref|XP_001487494.1| hypothetical protein PGUG_00871 [Meyerozyma guilliermondii ATCC
6260]
gi|146388615|gb|EDK36773.1| hypothetical protein PGUG_00871 [Meyerozyma guilliermondii ATCC
6260]
Length = 222
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 132/183 (72%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS Y ++ K + FTY + G ++ AKS V F+SSM+ASADVLAM
Sbjct: 44 PDFSSYLNNKTDQKSRN------FTYFMVGSMGLLSAAGAKSTVEAFLSSMAASADVLAM 97
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV L IPEG++V KW+GKP+FIRHRT +EID +I +LRDPQ D+DRVK P
Sbjct: 98 AKVEVKLGAIPEGKNVIVKWQGKPVFIRHRTAEEIDEANKVDIKKLRDPQNDADRVKKPE 157
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y F D+
Sbjct: 158 WLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEYDFTDDE 217
Query: 190 ILI 192
L+
Sbjct: 218 TLL 220
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFS Y ++ K + FTY + G ++ AKS V F+SSM+ASADVLAM
Sbjct: 44 PDFSSYLNNKTDQKSRN------FTYFMVGSMGLLSAAGAKSTVEAFLSSMAASADVLAM 97
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 98 AKVEVKLGAIPEGKNVIVKWQGKPVFIRHR 127
>gi|388855802|emb|CCF50586.1| probable ubiquinol-cytochrome-c reductase Rieske iron-sulfur
protein [Ustilago hordei]
Length = 285
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 132/180 (73%), Gaps = 7/180 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS YR + P+ KAF+Y + G ++ AK+ V+ F+SSM AS+DVL
Sbjct: 105 QVPDFSGYR-TKTPE------SNKAFSYFMVGSMGLIAASGAKATVSDFLSSMGASSDVL 157
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +EVD+N IPEG++ KWRGKP+F+RHRT+ EID ++S+LRDP+ DSDR K
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHRTKSEIDEANAVDVSKLRDPEKDSDRTKR 217
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR RKGPAP N+EVP Y F D
Sbjct: 218 PEWLVMLGVCTHLGCVPIGEAGDYGGWYCPCHGSHYDISGRARKGPAPLNLEVPEYDFND 277
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 62/92 (67%), Gaps = 7/92 (7%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS YR + P+ KAF+Y + G ++ AK+ V+ F+SSM AS+DVL
Sbjct: 105 QVPDFSGYR-TKTPE------SNKAFSYFMVGSMGLIAASGAKATVSDFLSSMGASSDVL 157
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A +EVD+N IPEG++ KWRGKP+F+RHR
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHR 189
>gi|154286204|ref|XP_001543897.1| hypothetical protein HCAG_00943 [Ajellomyces capsulatus NAm1]
gi|150407538|gb|EDN03079.1| hypothetical protein HCAG_00943 [Ajellomyces capsulatus NAm1]
Length = 243
Score = 233 bits (593), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 60 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 113
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI +N LRDPQ DSDR
Sbjct: 114 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPDEIQEAENAKWESLRDPQPDSDR 173
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVPPY
Sbjct: 174 VQKPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYS 233
Query: 185 FGDEGILI 192
F E LI
Sbjct: 234 FPTEESLI 241
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY E+ K F+Y +AG +V V AK+ V F+ +MSASA
Sbjct: 60 STLKIPSFKKYASKSG------ESSNKVFSYFMAGSMGLVTAVGAKATVQDFLVNMSASA 113
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 114 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 148
>gi|169785999|ref|XP_001827460.1| cytochrome b-c1 complex subunit Rieske [Aspergillus oryzae RIB40]
gi|238506929|ref|XP_002384666.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus flavus NRRL3357]
gi|83776208|dbj|BAE66327.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689379|gb|EED45730.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus flavus NRRL3357]
gi|391866214|gb|EIT75486.1| ubiquinol cytochrome c reductase, subunit RIP1 [Aspergillus oryzae
3.042]
Length = 237
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 54 STYKIPDFSKYASKKPPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 107
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EI+ + LRDPQAD DR
Sbjct: 108 DVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHRTQDEINEANSIEWQTLRDPQADEDR 167
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 168 VQKPEWLVMLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYS 227
Query: 185 FGDEGILI 192
F DE L+
Sbjct: 228 FPDESTLV 235
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 54 STYKIPDFSKYASKKPPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 107
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 108 DVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHR 142
>gi|403177573|ref|XP_003336063.2| ubiquinol-cytochrome c reductase iron-sulfur subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
gi|375172925|gb|EFP91644.2| ubiquinol-cytochrome c reductase iron-sulfur subunit [Puccinia
graminis f. sp. tritici CRL 75-36-700-3]
Length = 401
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 135/184 (73%), Gaps = 8/184 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P++S Y K E + F+Y++ G +V AKS+V+ F++++SASADVLA+
Sbjct: 223 PNYSSY-------KTVSEDSGRVFSYLMVGSMGLVTASGAKSLVSDFLTNLSASADVLAL 275
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +E+DL IPEG++V KWRGKP+FIRHRT EID + +IS LRDPQADSDR K P
Sbjct: 276 AKVEIDLANIPEGKNVIIKWRGKPVFIRHRTPAEIDEANSVDISSLRDPQADSDRAKRPE 335
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-E 188
WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR R+GPAP N+EVP Y F D E
Sbjct: 336 WLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRARRGPAPLNLEVPAYDFNDEE 395
Query: 189 GILI 192
G LI
Sbjct: 396 GKLI 399
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P++S Y K E + F+Y++ G +V AKS+V+ F++++SASADVLA+
Sbjct: 223 PNYSSY-------KTVSEDSGRVFSYLMVGSMGLVTASGAKSLVSDFLTNLSASADVLAL 275
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 276 AKVEIDLANIPEGKNVIIKWRGKPVFIRHR 305
>gi|325182502|emb|CCA16957.1| cytochrome bc1 complex subunit Rieske putative [Albugo laibachii
Nc14]
Length = 220
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 139/188 (73%), Gaps = 5/188 (2%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
D+ TPD + DR + R+AFTY + GG+ ++ A+ V +F+ SMSASAD
Sbjct: 36 DMSTPD-HYFETDR---ISSGDPSRRAFTYFVLGGARIMYATAARLAVIKFVGSMSASAD 91
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+AT E DL+ I EG +VT KWRGKP+FI+HRT +EI++ + +S LRDP+ D RV
Sbjct: 92 VLALATAEFDLSSIDEGATVTVKWRGKPIFIKHRTDQEIESANDVPVSSLRDPETDDVRV 151
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
KDP WLV++G+CTHLGCVPI+NAGD+ G++CPCHGSHYD SGRIRKGPAP N+E+PPYQF
Sbjct: 152 KDPKWLVVLGVCTHLGCVPISNAGDYKGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYQF 211
Query: 186 -GDEGILI 192
D IL+
Sbjct: 212 LEDNKILL 219
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
D+ TPD + DR + R+AFTY + GG+ ++ A+ V +F+ SMSASAD
Sbjct: 36 DMSTPD-HYFETDR---ISSGDPSRRAFTYFVLGGARIMYATAARLAVIKFVGSMSASAD 91
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+AT E DL+ I EG +VT KWRGKP+FI+HR
Sbjct: 92 VLALATAEFDLSSIDEGATVTVKWRGKPIFIKHR 125
>gi|326474064|gb|EGD98073.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trichophyton
tonsurans CBS 112818]
gi|326478261|gb|EGE02271.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trichophyton
equinum CBS 127.97]
Length = 243
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 113
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI QNT LRDPQ DSDR
Sbjct: 114 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHRTASEIQEAQNTKWENLRDPQPDSDR 173
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 174 VKNPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPIYD 233
Query: 185 FGDEGILI 192
F + L+
Sbjct: 234 FPSDDTLV 241
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 113
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 114 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHR 148
>gi|119479197|ref|XP_001259627.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Neosartorya fischeri NRRL 181]
gi|119407781|gb|EAW17730.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Neosartorya fischeri NRRL 181]
Length = 239
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 132/189 (69%), Gaps = 6/189 (3%)
Query: 4 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S ++ P FSKY ++ P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 55 QSTLKIPSFSKYASNKPPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 108
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EI Q + LRDPQ D D
Sbjct: 109 ADVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHRTQDEIQEAQQYDWKTLRDPQPDED 168
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV+ P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGR+RKGPAP N+EVP Y
Sbjct: 169 RVQKPEWLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRVRKGPAPLNLEVPQY 228
Query: 184 QFGDEGILI 192
F DEG L+
Sbjct: 229 SFPDEGTLV 237
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
Query: 197 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S ++ P FSKY ++ P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 55 QSTLKIPSFSKYASNKPPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 108
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 109 ADVLAQAKVEIGLASIPEGKNVIIKWRGKPVFIRHR 144
>gi|443896785|dbj|GAC74128.1| ubiquinol cytochrome c reductase, subunit RIP1 [Pseudozyma
antarctica T-34]
Length = 285
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 130/180 (72%), Gaps = 7/180 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS YR + KAF+Y + G ++ AK+ V+ F++SM AS+DVL
Sbjct: 105 QVPDFSGYRT-------KSADSNKAFSYFMVGSMGLIAASGAKATVSDFLASMGASSDVL 157
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +EVD+N IPEG++ KWRGKP+F+RHRT+ EID +IS+LRDP+ DSDR K
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHRTKDEIDEANAVDISKLRDPEKDSDRAKR 217
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR RKGPAP N+EVP Y F D
Sbjct: 218 PEWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRARKGPAPLNLEVPEYDFND 277
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS YR + KAF+Y + G ++ AK+ V+ F++SM AS+DVL
Sbjct: 105 QVPDFSGYRT-------KSADSNKAFSYFMVGSMGLIAASGAKATVSDFLASMGASSDVL 157
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A +EVD+N IPEG++ KWRGKP+F+RHR
Sbjct: 158 ALAKVEVDMNSIPEGKNAIIKWRGKPVFVRHR 189
>gi|164659776|ref|XP_001731012.1| hypothetical protein MGL_2011 [Malassezia globosa CBS 7966]
gi|159104910|gb|EDP43798.1| hypothetical protein MGL_2011 [Malassezia globosa CBS 7966]
Length = 308
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/181 (56%), Positives = 134/181 (74%), Gaps = 7/181 (3%)
Query: 7 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 66
++ PDFS+ R +NP+ +AF+Y + G V A+S V F+S+MSAS+DV
Sbjct: 127 LQAPDFSETRV-KNPE------VHRAFSYFMIGTFGAVSAASARSTVTNFLSTMSASSDV 179
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK 126
LA+A +EVD++ IPEG++ KWRGKP+F+RHRTQ EID ++S LRDP+ADSDR K
Sbjct: 180 LALAKVEVDMSNIPEGKNAIIKWRGKPVFVRHRTQAEIDEANQVDMSSLRDPEADSDRAK 239
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 240 RPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYDFN 299
Query: 187 D 187
D
Sbjct: 300 D 300
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Query: 200 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 259
++ PDFS+ R +NP+ +AF+Y + G V A+S V F+S+MSAS+DV
Sbjct: 127 LQAPDFSETRV-KNPE------VHRAFSYFMIGTFGAVSAASARSTVTNFLSTMSASSDV 179
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
LA+A +EVD++ IPEG++ KWRGKP+F+RHR
Sbjct: 180 LALAKVEVDMSNIPEGKNAIIKWRGKPVFVRHR 212
>gi|449017901|dbj|BAM81303.1| cytochrome c reductase Rieske iron-sulfur subunit [Cyanidioschyzon
merolae strain 10D]
Length = 320
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 96/163 (58%), Positives = 128/163 (78%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+AFTYM+ G + +V + ++ +FI +MSASADVLA+ T+EVDL+ +P GQ+ T KW
Sbjct: 156 RRAFTYMMLGSAKLVAASAVRVLLLKFIYTMSASADVLALGTVEVDLSAVPLGQTATIKW 215
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+ IRHRT +EI+ + + + LRDP+ D+ R +P WLV++G+CTHLGCVPIANAG
Sbjct: 216 RGKPVMIRHRTPEEIEAARRDDNAPLRDPETDASRAINPEWLVVVGVCTHLGCVPIANAG 275
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
DWGG++CPCHGSHYD SGR+RKGPAP N+EVP Y F D+G +I
Sbjct: 276 DWGGFFCPCHGSHYDVSGRVRKGPAPLNLEVPTYSFTDDGKII 318
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 53/70 (75%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+AFTYM+ G + +V + ++ +FI +MSASADVLA+ T+EVDL+ +P GQ+ T KW
Sbjct: 156 RRAFTYMMLGSAKLVAASAVRVLLLKFIYTMSASADVLALGTVEVDLSAVPLGQTATIKW 215
Query: 283 RGKPLFIRHR 292
RGKP+ IRHR
Sbjct: 216 RGKPVMIRHR 225
>gi|226293937|gb|EEH49357.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Paracoccidioides brasiliensis Pb18]
Length = 251
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 135/188 (71%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 68 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 121
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHRT EI ++T LRDPQ DSDR
Sbjct: 122 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHRTPSEIQEAESTKWETLRDPQPDSDR 181
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WLV++G+CTHLGCVPI AG++GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 182 VKNPEWLVMLGVCTHLGCVPIGEAGEYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTYS 241
Query: 185 FGDEGILI 192
F E L+
Sbjct: 242 FPTESTLL 249
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P F KY KG E T K F+Y +AG ++ V AK+ V+ F+ +MSASA
Sbjct: 68 STLKIPSFKKYA-----SKGGE-TSNKVFSYFMAGSMGLLTAVGAKATVHDFLLNMSASA 121
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 122 DVLAQAKVEIALSAIPEGKNVIIKWRGKPVFIRHR 156
>gi|395334011|gb|EJF66387.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 279
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 133/183 (72%), Gaps = 7/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFSKY + + ET + Y++ G ++ AKS V +F+++MSASADVLAM
Sbjct: 102 PDFSKY-------EAKSETTNRGLAYLMIGSLGLLSASAAKSTVTEFLATMSASADVLAM 154
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +E+DL IPEG++V KWRGKP+FIRHRT EI+ +NT+ LRDP+AD R K P
Sbjct: 155 AKVELDLAAIPEGKNVIIKWRGKPVFIRHRTPDEIEEARNTDWKGLRDPEADEARTKKPE 214
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F ++
Sbjct: 215 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPQYDFIEDN 274
Query: 190 ILI 192
+I
Sbjct: 275 KMI 277
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 67/110 (60%), Gaps = 13/110 (11%)
Query: 189 GILIRMLAHSDI------RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCA 242
GI L H+ + PDFSKY + + ET + Y++ G ++ A
Sbjct: 82 GITQHRLLHTSVANRDAPNVPDFSKY-------EAKSETTNRGLAYLMIGSLGLLSASAA 134
Query: 243 KSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
KS V +F+++MSASADVLAMA +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 135 KSTVTEFLATMSASADVLAMAKVELDLAAIPEGKNVIIKWRGKPVFIRHR 184
>gi|50543086|ref|XP_499709.1| YALI0A02915p [Yarrowia lipolytica]
gi|49645574|emb|CAG83632.1| YALI0A02915p [Yarrowia lipolytica CLIB122]
Length = 225
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 134/189 (70%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S + PDF+ Y ++DRN D + F+Y + G ++ AK+ V F+S+MSAS
Sbjct: 41 STYKIPDFTPYLKKDRNTD------ANRLFSYFMIGSFGMLSAAGAKATVQDFLSNMSAS 94
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV L IP G++V KWRGKP+FIRHRT +EI+ N++ LRDPQ D +
Sbjct: 95 ADVLAMAKVEVKLGAIPLGKNVIIKWRGKPIFIRHRTSEEIEEANEVNVATLRDPQTDDE 154
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV+ P WLV+IG+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y
Sbjct: 155 RVQKPEWLVMIGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEY 214
Query: 184 QFGDEGILI 192
F D L+
Sbjct: 215 DFADAETLV 223
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKY-RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S + PDF+ Y ++DRN D + F+Y + G ++ AK+ V F+S+MSAS
Sbjct: 41 STYKIPDFTPYLKKDRNTD------ANRLFSYFMIGSFGMLSAAGAKATVQDFLSNMSAS 94
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV L IP G++V KWRGKP+FIRHR
Sbjct: 95 ADVLAMAKVEVKLGAIPLGKNVIIKWRGKPIFIRHR 130
>gi|425772694|gb|EKV11090.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Penicillium
digitatum Pd1]
gi|425773460|gb|EKV11813.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Penicillium
digitatum PHI26]
Length = 237
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 133/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P+FSKY+ + +P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 54 STLKIPNFSKYKSNSSPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 107
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EID + LRDPQ D DR
Sbjct: 108 DVLAQAKVEISLGAIPEGKNVIIKWRGKPVFIRHRTQSEIDEAREAKWEGLRDPQPDEDR 167
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+EVP Y
Sbjct: 168 VQRPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLEVPTYS 227
Query: 185 FGDEGILI 192
F ++ L+
Sbjct: 228 FPEDDTLV 235
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P+FSKY+ + +P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 54 STLKIPNFSKYKSNSSPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 107
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 108 DVLAQAKVEISLGAIPEGKNVIIKWRGKPVFIRHR 142
>gi|392597085|gb|EIW86407.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Coniophora
puteana RWD-64-598 SS2]
Length = 276
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 132/184 (71%), Gaps = 8/184 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS Y + + + +A +Y+I G V+ AKS V F+ +M+ASADVLA+
Sbjct: 98 PDFSDY-------EAKSSSTNRALSYVIVGSMGVLSASVAKSAVTGFLETMAASADVLAL 150
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A EV+L IPEG++V KWRGKP+FIRHRTQ EI+ +N N RDPQ+D DRVK P
Sbjct: 151 AKTEVELASIPEGKNVIIKWRGKPVFIRHRTQGEIEEARNVNWKTFRDPQSDEDRVKKPE 210
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-E 188
WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGR RKGPAP N+E+PPY F D +
Sbjct: 211 WLVMVGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRARKGPAPLNLEIPPYDFNDVD 270
Query: 189 GILI 192
G LI
Sbjct: 271 GNLI 274
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 12/106 (11%)
Query: 192 IRMLAHSDI-----RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV 246
+R+L S + PDFS Y + + + +A +Y+I G V+ AKS V
Sbjct: 82 LRLLHTSAVAREAPEVPDFSDY-------EAKSSSTNRALSYVIVGSMGVLSASVAKSAV 134
Query: 247 NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ +M+ASADVLA+A EV+L IPEG++V KWRGKP+FIRHR
Sbjct: 135 TGFLETMAASADVLALAKTEVELASIPEGKNVIIKWRGKPVFIRHR 180
>gi|121713480|ref|XP_001274351.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus clavatus NRRL 1]
gi|119402504|gb|EAW12925.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus clavatus NRRL 1]
Length = 239
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/189 (56%), Positives = 130/189 (68%), Gaps = 6/189 (3%)
Query: 4 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S ++ P F KY + P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 55 QSTLKIPSFGKYSSGKAPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 108
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLA A +EV L IPEG++V KWRGKP+FIRHRTQ EI Q + LRDPQAD D
Sbjct: 109 ADVLAQAKVEVGLASIPEGKNVIIKWRGKPVFIRHRTQDEIQEAQQIDWKTLRDPQADED 168
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV+ P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 169 RVQKPEWLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQY 228
Query: 184 QFGDEGILI 192
F DE L+
Sbjct: 229 NFPDEETLV 237
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 197 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S ++ P F KY + P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 55 QSTLKIPSFGKYSSGKAPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 108
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLA A +EV L IPEG++V KWRGKP+FIRHR
Sbjct: 109 ADVLAQAKVEVGLASIPEGKNVIIKWRGKPVFIRHR 144
>gi|255954597|ref|XP_002568051.1| Pc21g10160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589762|emb|CAP95913.1| Pc21g10160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 236
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 133/188 (70%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P+FSKY+ + +P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 53 STLKIPNFSKYKSNSSPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 106
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EID + LRDPQ D DR
Sbjct: 107 DVLAQAKVEIALGAIPEGKNVIIKWRGKPVFIRHRTQSEIDEARGYKWEGLRDPQPDEDR 166
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 167 VQRPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPTYS 226
Query: 185 FGDEGILI 192
F ++ L+
Sbjct: 227 FPEDETLV 234
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P+FSKY+ + +P Q F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 53 STLKIPNFSKYKSNSSPRSNQ------VFSYFMAGSLGLASAVGAKATVQDFLVNMSASA 106
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 107 DVLAQAKVEIALGAIPEGKNVIIKWRGKPVFIRHR 141
>gi|401626143|gb|EJS44105.1| rip1p [Saccharomyces arboricola H-6]
Length = 215
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 139/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSVLKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVP 203
Query: 182 PYQFGDEGILI 192
Y+F + +++
Sbjct: 204 AYEFEGDKVIV 214
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|241953261|ref|XP_002419352.1| ubiquinol-cytochrome c oxidoreductase complex subunit, putative;
ubiquinol-cytochrome c reductase iron-sulfur subunit,
mitochondrial precursor, putative [Candida dubliniensis
CD36]
gi|223642692|emb|CAX42946.1| ubiquinol-cytochrome c oxidoreductase complex subunit, putative
[Candida dubliniensis CD36]
Length = 213
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 133/187 (71%), Gaps = 6/187 (3%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ + PD+S Y +++ GQ + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDYSSYLNNKS---GQGS---RNFTYFMVGSMGLLSAAGAKSTVEAFLSSFAASAD 84
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EV L IPEG++V KW+GKP+FIRHRT EI+ NI LRDPQ DSDRV
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHRTADEIEEANQVNIKSLRDPQNDSDRV 144
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F
Sbjct: 145 KKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDF 204
Query: 186 GDEGILI 192
D+ L+
Sbjct: 205 TDDETLL 211
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 6/94 (6%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ + PD+S Y +++ GQ + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDYSSYLNNKS---GQGS---RNFTYFMVGSMGLLSAAGAKSTVEAFLSSFAASAD 84
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHR 118
>gi|315052610|ref|XP_003175679.1| cytochrome b-c1 complex subunit Rieske [Arthroderma gypseum CBS
118893]
gi|311340994|gb|EFR00197.1| cytochrome b-c1 complex subunit Rieske [Arthroderma gypseum CBS
118893]
Length = 243
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 106/188 (56%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGTMGMMTAVGAKATVQDFLLNMSASA 113
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI Q+T LRDPQ DSDR
Sbjct: 114 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHRTASEIQEAQDTKWEGLRDPQPDSDR 173
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 174 VKNPEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPAYD 233
Query: 185 FGDEGILI 192
F + L+
Sbjct: 234 FPTDDTLV 241
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGTMGMMTAVGAKATVQDFLLNMSASA 113
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 114 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHR 148
>gi|70997691|ref|XP_753583.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus fumigatus Af293]
gi|66851219|gb|EAL91545.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus fumigatus Af293]
gi|159126686|gb|EDP51802.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Aspergillus fumigatus A1163]
Length = 298
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/189 (55%), Positives = 132/189 (69%), Gaps = 6/189 (3%)
Query: 4 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S ++ P FSKY ++ P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 114 QSTLKIPSFSKYASNKPPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 167
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLA A +E+ L+ IPEG++V KWRGKP+FIRHRTQ EI Q + LRDPQ D D
Sbjct: 168 ADVLAQAKVEIGLDSIPEGKNVIIKWRGKPVFIRHRTQDEIQEAQQIDWKTLRDPQPDED 227
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV+ P WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 228 RVQKPEWLVMLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQY 287
Query: 184 QFGDEGILI 192
F DE L+
Sbjct: 288 SFPDESTLV 296
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 6/96 (6%)
Query: 197 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S ++ P FSKY ++ P Q F+Y +AG + V AK+ V F+ +MSAS
Sbjct: 114 QSTLKIPSFSKYASNKPPRSNQ------VFSYFMAGALGLGSAVGAKATVQDFLVNMSAS 167
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLA A +E+ L+ IPEG++V KWRGKP+FIRHR
Sbjct: 168 ADVLAQAKVEIGLDSIPEGKNVIIKWRGKPVFIRHR 203
>gi|254582693|ref|XP_002499078.1| ZYRO0E03146p [Zygosaccharomyces rouxii]
gi|238942652|emb|CAR30823.1| ZYRO0E03146p [Zygosaccharomyces rouxii]
Length = 216
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 135/188 (71%), Gaps = 7/188 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
A S RTP+F ++ N PD+ +++ Y + G ++ AKS V+ FISSMS
Sbjct: 29 AKSTYRTPNFGDSIKENNDPDRS------RSYAYFMVGSLGLLSSAGAKSTVDSFISSMS 82
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
ASADVLAMA +EV L IPEG++V KW+GKP+FIRHRT E+ ++ L+DPQ D
Sbjct: 83 ASADVLAMAKVEVSLAAIPEGKNVVVKWQGKPVFIRHRTSAEVQEANEVQMAALKDPQTD 142
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DR KDP WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 143 ADRTKDPQWLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 202
Query: 182 PYQFGDEG 189
Y+F ++G
Sbjct: 203 AYEFEEDG 210
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 64/98 (65%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
A S RTP+F ++ N PD+ +++ Y + G ++ AKS V+ FISSMS
Sbjct: 29 AKSTYRTPNFGDSIKENNDPDRS------RSYAYFMVGSLGLLSSAGAKSTVDSFISSMS 82
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 83 ASADVLAMAKVEVSLAAIPEGKNVVVKWQGKPVFIRHR 120
>gi|212533291|ref|XP_002146802.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Talaromyces marneffei ATCC 18224]
gi|210072166|gb|EEA26255.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Talaromyces marneffei ATCC 18224]
Length = 238
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/188 (55%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S ++ P+F KY +P T K F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 55 STLKIPNFKKYMSKNSP------TTNKVFSYFVAGTMGLGSAVGAKATVQDFLVNMSASA 108
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ L IPEG++V KWRGKP+F+RHRT +EI + LRDPQ D DR
Sbjct: 109 DVLAQAKVEIALGSIPEGKNVIIKWRGKPVFVRHRTGEEIKEAAEVDWKTLRDPQPDEDR 168
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V+ P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP YQ
Sbjct: 169 VQKPEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPAYQ 228
Query: 185 FGDEGILI 192
F DE L+
Sbjct: 229 FPDEETLV 236
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S ++ P+F KY +P T K F+Y +AG + V AK+ V F+ +MSASA
Sbjct: 55 STLKIPNFKKYMSKNSP------TTNKVFSYFVAGTMGLGSAVGAKATVQDFLVNMSASA 108
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ L IPEG++V KWRGKP+F+RHR
Sbjct: 109 DVLAQAKVEIALGSIPEGKNVIIKWRGKPVFVRHR 143
>gi|302658130|ref|XP_003020773.1| hypothetical protein TRV_05128 [Trichophyton verrucosum HKI 0517]
gi|291184635|gb|EFE40155.1| hypothetical protein TRV_05128 [Trichophyton verrucosum HKI 0517]
Length = 301
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 131/190 (68%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
+ S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSA
Sbjct: 116 SSSTYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSA 169
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI Q T LRDPQ DS
Sbjct: 170 SADVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHRTASEIQEAQETKWENLRDPQPDS 229
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP
Sbjct: 230 DRVKNPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPI 289
Query: 183 YQFGDEGILI 192
Y F + L+
Sbjct: 290 YDFPSDDTLV 299
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
+ S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSA
Sbjct: 116 SSSTYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSA 169
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 170 SADVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHR 206
>gi|302496581|ref|XP_003010291.1| hypothetical protein ARB_02990 [Arthroderma benhamiae CBS 112371]
gi|291173834|gb|EFE29651.1| hypothetical protein ARB_02990 [Arthroderma benhamiae CBS 112371]
Length = 301
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 118 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 171
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI Q T LRDPQ DSDR
Sbjct: 172 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHRTASEIQEAQETKWENLRDPQPDSDR 231
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 232 VKNPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPIYD 291
Query: 185 FGDEGILI 192
F + L+
Sbjct: 292 FPSDDTLV 299
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 118 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 171
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 172 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHR 206
>gi|259487700|tpe|CBF86573.1| TPA: Ubiquinol-cytochrome c reductase (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 228
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 105/190 (55%), Positives = 130/190 (68%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A ++ PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSA
Sbjct: 43 AKDTLKVPDFSKYSSKKAPRSNQ------VFSYFVAGTMGLASAVGAKATVQDFLVNMSA 96
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLA A +E+ L IPEG++V KWRGKP+FIRHRTQ EI Q + LRDPQ D
Sbjct: 97 SADVLAQAKVEIGLATIPEGKNVIIKWRGKPVFIRHRTQDEIKEAQEYDWKTLRDPQPDE 156
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
+RV+ WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP
Sbjct: 157 ERVQKAEWLVMLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQ 216
Query: 183 YQFGDEGILI 192
Y F DE LI
Sbjct: 217 YNFPDEETLI 226
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A ++ PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSA
Sbjct: 43 AKDTLKVPDFSKYSSKKAPRSNQ------VFSYFVAGTMGLASAVGAKATVQDFLVNMSA 96
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 97 SADVLAQAKVEIGLATIPEGKNVIIKWRGKPVFIRHR 133
>gi|393218915|gb|EJD04403.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Fomitiporia
mediterranea MF3/22]
Length = 280
Score = 230 bits (587), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 136/186 (73%), Gaps = 9/186 (4%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS Y+ NP A +Y + GG ++ AKS V +F+ +MSASADVL
Sbjct: 101 QVPDFSHYQT--NP------RTNAALSYFMIGGMGLLSASVAKSTVTEFLGTMSASADVL 152
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +EV+L IPEG++V KWRGKP+FIRHRTQ EID + + +LRDPQ+D DRVK
Sbjct: 153 ALAKVEVELASIPEGKNVIIKWRGKPVFIRHRTQSEIDEARAEDWKKLRDPQSDEDRVKK 212
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++GICTHLGCVPI +GD+GG++CPCHGSHYD SGR+RKGPAP N+EVP Y+F +
Sbjct: 213 PEWLVMLGICTHLGCVPIGESGDYGGWFCPCHGSHYDISGRVRKGPAPLNLEVPQYEFNE 272
Query: 188 -EGILI 192
EG L+
Sbjct: 273 PEGKLV 278
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 8/92 (8%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS Y+ NP A +Y + GG ++ AKS V +F+ +MSASADVL
Sbjct: 101 QVPDFSHYQT--NP------RTNAALSYFMIGGMGLLSASVAKSTVTEFLGTMSASADVL 152
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A +EV+L IPEG++V KWRGKP+FIRHR
Sbjct: 153 ALAKVEVELASIPEGKNVIIKWRGKPVFIRHR 184
>gi|320593168|gb|EFX05577.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Grosmannia clavigera kw1407]
Length = 257
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 122/160 (76%)
Query: 33 FTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGK 92
F Y + G + AKS V +F+ +MSASADVLAMA +EVDLN IPEG++V KWRGK
Sbjct: 96 FGYFMVGTLGAISAAGAKSTVQEFLVNMSASADVLAMAKVEVDLNTIPEGKNVIIKWRGK 155
Query: 93 PLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWG 152
P+FIRHRT+ EI NI LRDPQAD+DRVK P WLV++G+CTHLGCVPI AGD+G
Sbjct: 156 PVFIRHRTEAEIAEANTVNIQSLRDPQADADRVKRPEWLVMLGVCTHLGCVPIGEAGDYG 215
Query: 153 GYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
G++CPCHGSHYD SGRIRKGPAP N+E+P Y F ++ L+
Sbjct: 216 GWFCPCHGSHYDISGRIRKGPAPLNLEIPQYDFPEDERLV 255
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 49/67 (73%)
Query: 226 FTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGK 285
F Y + G + AKS V +F+ +MSASADVLAMA +EVDLN IPEG++V KWRGK
Sbjct: 96 FGYFMVGTLGAISAAGAKSTVQEFLVNMSASADVLAMAKVEVDLNTIPEGKNVIIKWRGK 155
Query: 286 PLFIRHR 292
P+FIRHR
Sbjct: 156 PVFIRHR 162
>gi|396465900|ref|XP_003837558.1| similar to ubiquinol-cytochrome c reductase iron-sulfur subunit
[Leptosphaeria maculans JN3]
gi|312214116|emb|CBX94118.1| similar to ubiquinol-cytochrome c reductase iron-sulfur subunit
[Leptosphaeria maculans JN3]
Length = 233
Score = 230 bits (586), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALASLGAKATVQDFLVNMSASADVL 106
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI ++T LRDPQ DSDRVK
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTESEIKEAEDTKWQSLRDPQPDSDRVKS 166
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 167 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPSYDFPE 226
Query: 188 EGILI 192
EG ++
Sbjct: 227 EGKVV 231
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALASLGAKATVQDFLVNMSASADVL 106
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 138
>gi|327299482|ref|XP_003234434.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trichophyton
rubrum CBS 118892]
gi|326463328|gb|EGD88781.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trichophyton
rubrum CBS 118892]
Length = 315
Score = 230 bits (586), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 130/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 132 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 185
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+ LN IPEG++V KWRGKP+FIRHRT EI Q T LRDPQ DSDR
Sbjct: 186 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHRTASEIQEAQETKWENLRDPQPDSDR 245
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 246 VKNPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPIYD 305
Query: 185 FGDEGILI 192
F + L+
Sbjct: 306 FPSDDTLV 313
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S + P F KY R E+ K F+Y + G ++ V AK+ V F+ +MSASA
Sbjct: 132 STYKIPSFGKYASPR------RESTNKTFSYFVVGSMGMMTAVGAKATVQDFLLNMSASA 185
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+ LN IPEG++V KWRGKP+FIRHR
Sbjct: 186 DVLAQAKVEIALNSIPEGKNVIIKWRGKPVFIRHR 220
>gi|403413645|emb|CCM00345.1| predicted protein [Fibroporia radiculosa]
Length = 292
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 138/198 (69%), Gaps = 14/198 (7%)
Query: 2 LAHSDI------RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 55
L HS + + PDFS Y + + E+ + Y + G ++ AKS V +
Sbjct: 100 LIHSSVPAKDAPQVPDFSHY-------EAKSESTNRGVAYFMIGSLGLLSATVAKSTVTE 152
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+++M+ASADVLAMA +E++L IPEG++ KWRGKP+FIRHRTQ E+ ++TN L
Sbjct: 153 FLATMAASADVLAMAKVEIELASIPEGKNAIIKWRGKPVFIRHRTQDEVQDARSTNWKSL 212
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
RDPQ+D DR K P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP
Sbjct: 213 RDPQSDEDRTKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAP 272
Query: 176 TNMEVPPYQFGD-EGILI 192
+N+EVP Y F + G+L+
Sbjct: 273 SNLEVPQYDFDEANGLLV 290
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 17/121 (14%)
Query: 178 MEVPPYQFGDEGILIRMLAHSDI------RTPDFSKYRRDRNPDKGQEETQRKAFTYMIA 231
+ +PP GI + L HS + + PDFS Y + + E+ + Y +
Sbjct: 87 ISLPP----STGIFQKRLIHSSVPAKDAPQVPDFSHY-------EAKSESTNRGVAYFMI 135
Query: 232 GGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
G ++ AKS V +F+++M+ASADVLAMA +E++L IPEG++ KWRGKP+FIRH
Sbjct: 136 GSLGLLSATVAKSTVTEFLATMAASADVLAMAKVEIELASIPEGKNAIIKWRGKPVFIRH 195
Query: 292 R 292
R
Sbjct: 196 R 196
>gi|354545329|emb|CCE42056.1| hypothetical protein CPAR2_806050 [Candida parapsilosis]
Length = 213
Score = 229 bits (585), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 132/186 (70%), Gaps = 6/186 (3%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ + PDFS Y ++P + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDFSSYLNHKSPQASRN------FTYFMVGSMGLLSAAGAKSTVESFLSSFAASAD 84
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EV L IP G++V KW+GKP+FIRHRT +EI+ ++S+LRDPQ DSDRV
Sbjct: 85 VLAMAKVEVKLGAIPLGKNVIVKWQGKPVFIRHRTPEEIEEANEVDVSKLRDPQKDSDRV 144
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 145 QKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYSF 204
Query: 186 GDEGIL 191
D+ L
Sbjct: 205 PDDDTL 210
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ + PDFS Y ++P + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDFSSYLNHKSPQASRN------FTYFMVGSMGLLSAAGAKSTVESFLSSFAASAD 84
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EV L IP G++V KW+GKP+FIRHR
Sbjct: 85 VLAMAKVEVKLGAIPLGKNVIVKWQGKPVFIRHR 118
>gi|378726343|gb|EHY52802.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Exophiala
dermatitidis NIH/UT8656]
Length = 259
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F Y+ R P E + F Y + G ++ V AK+ V F+ +MSASADVL
Sbjct: 79 KVPSFKAYQA-RTP-----EVTNRVFQYFMVGSMGLLTAVGAKATVQDFLVNMSASADVL 132
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI ++ ++S LRDPQ DSDRVK
Sbjct: 133 AQAKVEIDLASIPEGKNVIIKWRGKPVFIRHRTEDEIKEAESVDLSVLRDPQPDSDRVKK 192
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +
Sbjct: 193 PEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPQYDFPE 252
Query: 188 EGILI 192
E L+
Sbjct: 253 EDKLV 257
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 6/100 (6%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
R + + P F Y+ R P E + F Y + G ++ V AK+ V F+ +
Sbjct: 71 RAKKYDTTKVPSFKAYQA-RTP-----EVTNRVFQYFMVGSMGLLTAVGAKATVQDFLVN 124
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLA A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 125 MSASADVLAQAKVEIDLASIPEGKNVIIKWRGKPVFIRHR 164
>gi|336374473|gb|EGO02810.1| hypothetical protein SERLA73DRAFT_176200 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387367|gb|EGO28512.1| Rieske iron-sulfur protein of the mitochondrial cytochrome bc1
complex, RIP1 [Serpula lacrymans var. lacrymans S7.9]
Length = 280
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 131/184 (71%), Gaps = 8/184 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF+ Y + Q ++ +A +Y + G V+ AKS V F+ +MSASADVLA+
Sbjct: 102 PDFTPY-------QAQSDSTNRALSYFMVGSLGVLSASVAKSTVTGFLETMSASADVLAL 154
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A EV+L IPEG++V KWRGKP+FIRHRT EI + + +LRDPQ+D DRVK P
Sbjct: 155 AKAEVELGGIPEGKNVIIKWRGKPVFIRHRTSDEIQEAKTADWKKLRDPQSDEDRVKRPE 214
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-E 188
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR RKGPAP N+EVPPY F D E
Sbjct: 215 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRARKGPAPLNLEVPPYDFNDAE 274
Query: 189 GILI 192
G L+
Sbjct: 275 GKLV 278
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF+ Y + Q ++ +A +Y + G V+ AKS V F+ +MSASADVLA+
Sbjct: 102 PDFTPY-------QAQSDSTNRALSYFMVGSLGVLSASVAKSTVTGFLETMSASADVLAL 154
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A EV+L IPEG++V KWRGKP+FIRHR
Sbjct: 155 AKAEVELGGIPEGKNVIIKWRGKPVFIRHR 184
>gi|365761188|gb|EHN02858.1| Rip1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838041|gb|EJT41852.1| RIP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 215
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 139/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDSDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI+ + ++S L+DPQ D
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIEEANSVDMSVLKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIP 203
Query: 182 PYQFGDEGILI 192
Y+F E +++
Sbjct: 204 AYEFDGEKVIV 214
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDSDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|189194245|ref|XP_001933461.1| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979025|gb|EDU45651.1| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 233
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI NT LRDPQ DSDRV+
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTEDEIKEADNTKWESLRDPQPDSDRVQK 166
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 167 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 226
Query: 188 EGILI 192
EG ++
Sbjct: 227 EGKVV 231
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 138
>gi|330930357|ref|XP_003303000.1| hypothetical protein PTT_15012 [Pyrenophora teres f. teres 0-1]
gi|311321302|gb|EFQ88900.1| hypothetical protein PTT_15012 [Pyrenophora teres f. teres 0-1]
Length = 233
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 132/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI NT LRDPQ DSDRV+
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTEDEIKEADNTKWEALRDPQPDSDRVQK 166
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 167 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPSYDFPE 226
Query: 188 EGILI 192
EG ++
Sbjct: 227 EGKVV 231
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 138
>gi|268552071|ref|XP_002634018.1| C. briggsae CBR-ISP-1 protein [Caenorhabditis briggsae]
Length = 276
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 136/196 (69%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
LAH+D+ P+ YRRD + P + E+ +R T + G V+ + K VV
Sbjct: 78 LAHTDVSFPNMESYRRDSTKNTQTPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTL 137
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
+S + +AD A+A+IE+++N IPEGQ+ TF+WRGKP+F++HRT+ EI E+ ++ LR
Sbjct: 138 VSYKAMAADQRALASIEINMNDIPEGQTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLR 197
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D +RV+ W V+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 198 HPQHDDERVQKDEWSVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPL 257
Query: 177 NMEVPPYQFGDEGILI 192
N+ VP Y F D I+I
Sbjct: 258 NLHVPAYSFKDTTIVI 273
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 190 ILIRMLAHSDIRTPDFSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKS 244
+ R LAH+D+ P+ YRRD + P + E+ +R T + G V+ + K
Sbjct: 73 VTSRRLAHTDVSFPNMESYRRDSTKNTQTPARDTEDQRRALPTALYYGAGGVLSLWAGKE 132
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VV +S + +AD A+A+IE+++N IPEGQ+ TF+WRGKP+F++HR
Sbjct: 133 VVQTLVSYKAMAADQRALASIEINMNDIPEGQTKTFEWRGKPVFVKHR 180
>gi|398364263|ref|NP_010890.3| ubiquinol--cytochrome-c reductase catalytic subunit RIP1
[Saccharomyces cerevisiae S288c]
gi|136715|sp|P08067.1|UCRI_YEAST RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|172426|gb|AAA34980.1| Rieske iron-sulfur protein [Saccharomyces cerevisiae]
gi|172428|gb|AAA34981.1| Rieske iron-sulfur protein [Saccharomyces cerevisiae]
gi|602391|gb|AAB64501.1| Rieske iron-sulfur protein of mitochondrial Ubiquinol-cytochrome c
reductase [Saccharomyces cerevisiae]
gi|45270572|gb|AAS56667.1| YEL024W [Saccharomyces cerevisiae]
gi|285811600|tpg|DAA07628.1| TPA: ubiquinol--cytochrome-c reductase catalytic subunit RIP1
[Saccharomyces cerevisiae S288c]
gi|392299920|gb|EIW11012.1| Rip1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 139/193 (72%), Gaps = 7/193 (3%)
Query: 1 MLAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
+ + S RTP+F ++ N DKG +++ Y + G ++ AKS V FISS
Sbjct: 28 LASKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISS 81
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ
Sbjct: 82 MTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQ 141
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E
Sbjct: 142 TDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLE 201
Query: 180 VPPYQFGDEGILI 192
+P Y+F + +++
Sbjct: 202 IPAYEFDGDKVIV 214
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
Query: 194 MLAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+ + S RTP+F ++ N DKG +++ Y + G ++ AKS V FISS
Sbjct: 28 LASKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISS 81
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 82 MTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|169611458|ref|XP_001799147.1| hypothetical protein SNOG_08842 [Phaeosphaeria nodorum SN15]
gi|111062890|gb|EAT84010.1| hypothetical protein SNOG_08842 [Phaeosphaeria nodorum SN15]
Length = 232
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 134/185 (72%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG +ET K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 52 KIPSFAAYR-----NKG-DETGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 105
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI ++T LRDPQ+D DRV+
Sbjct: 106 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTEDEIKEAEDTKWESLRDPQSDKDRVQK 165
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 166 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 225
Query: 188 EGILI 192
EG ++
Sbjct: 226 EGKVV 230
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 60/92 (65%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG +ET K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 52 KIPSFAAYR-----NKG-DETGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 105
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 106 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 137
>gi|323309343|gb|EGA62560.1| Rip1p [Saccharomyces cerevisiae FostersO]
gi|323333885|gb|EGA75274.1| Rip1p [Saccharomyces cerevisiae AWRI796]
Length = 201
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 138/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 16 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 69
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 70 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTD 129
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 130 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 189
Query: 182 PYQFGDEGILI 192
Y+F + +++
Sbjct: 190 AYEFDGDKVIV 200
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 16 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 69
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 70 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 107
>gi|323355392|gb|EGA87216.1| Rip1p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 138/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 203
Query: 182 PYQFGDEGILI 192
Y+F + +++
Sbjct: 204 AYEFDGDKVIV 214
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|385303373|gb|EIF47450.1| ubiquinol-cytochrome c reductase iron-sulfur mitochondrial
precursor [Dekkera bruxellensis AWRI1499]
Length = 219
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 130/180 (72%), Gaps = 3/180 (1%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
+PDF+ Y N KG + + +TY + G V+G AKS V+ F+S+ SASADVLA
Sbjct: 36 SPDFTSYL---NRSKGANPDKSRDYTYFMVGAYGVLGAAAAKSTVDVFLSTXSASADVLA 92
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
M+ +EV L IP G++ KW+GKP+FIRHRT +EI +IS LRDPQ D+DRV P
Sbjct: 93 MSKVEVKLGAIPLGENAVVKWQGKPVFIRHRTXEEIQEANXVDISTLRDPQKDADRVIKP 152
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WL+++G+CTHLGCVPI NAGD+ G++CPCHGSHYD SGRIRKGPAP N+E+P Y+F D+
Sbjct: 153 EWLIMVGVCTHLGCVPIGNAGDYDGWFCPCHGSHYDISGRIRKGPAPLNLEIPHYKFADD 212
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
+PDF+ Y N KG + + +TY + G V+G AKS V+ F+S+ SASADVLA
Sbjct: 36 SPDFTSYL---NRSKGANPDKSRDYTYFMVGAYGVLGAAAAKSTVDVFLSTXSASADVLA 92
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ +EV L IP G++ KW+GKP+FIRHR
Sbjct: 93 MSKVEVKLGAIPLGENAVVKWQGKPVFIRHR 123
>gi|121543951|gb|ABM55640.1| putative ubiquinol-cytochrome c reductase, Rieske iron-sulfur
polypeptide 1 [Maconellicoccus hirsutus]
Length = 276
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 134/189 (70%), Gaps = 5/189 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+H+D+R PD++ YRR R+P +E+ RKAFTY+ G+ V AK+ V + +
Sbjct: 79 FSHTDVRIPDYTVYRRKSCRDPSVPSKESADGRKAFTYVFTAGTIAFASVAAKTAVTKVV 138
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+ D LA +E+D++ +P G+SVTFKWR KPLF++HRT EI QNT +S LRD
Sbjct: 139 KYYGYNQDSLATGILELDISSVPVGKSVTFKWRNKPLFVKHRTPAEIQDSQNTPLSDLRD 198
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPT 176
P DS+R P WL+ +GICTHLGCVPIAN GD+ GGY+CPCHGSHYDA+GRIRKGPAP
Sbjct: 199 PAEDSERCPKPEWLIALGICTHLGCVPIANKGDFVGGYFCPCHGSHYDAAGRIRKGPAPE 258
Query: 177 NMEVPPYQF 185
N+E+PPY+F
Sbjct: 259 NLELPPYRF 267
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
+H+D+R PD++ YRR R+P +E+ RKAFTY+ G+ V AK+ V + +
Sbjct: 79 FSHTDVRIPDYTVYRRKSCRDPSVPSKESADGRKAFTYVFTAGTIAFASVAAKTAVTKVV 138
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ D LA +E+D++ +P G+SVTFKWR KPLF++HR
Sbjct: 139 KYYGYNQDSLATGILELDISSVPVGKSVTFKWRNKPLFVKHR 180
>gi|151944685|gb|EDN62944.1| ubiquinol-cytochrome c oxidoreductase complex subunit
[Saccharomyces cerevisiae YJM789]
gi|190405540|gb|EDV08807.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Saccharomyces
cerevisiae RM11-1a]
gi|207346080|gb|EDZ72688.1| YEL024Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269359|gb|EEU04658.1| Rip1p [Saccharomyces cerevisiae JAY291]
gi|259145879|emb|CAY79139.1| Rip1p [Saccharomyces cerevisiae EC1118]
gi|349577632|dbj|GAA22800.1| K7_Rip1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 215
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 138/191 (72%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 203
Query: 182 PYQFGDEGILI 192
Y+F + +++
Sbjct: 204 AYEFDGDKVIV 214
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|242777691|ref|XP_002479085.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Talaromyces stipitatus ATCC 10500]
gi|218722704|gb|EED22122.1| ubiquinol-cytochrome c reductase iron-sulfur subunit precursor
[Talaromyces stipitatus ATCC 10500]
Length = 242
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 7 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 66
++ P+F KY +P T K F+Y +AG + V AK+ V F+ +MSASADV
Sbjct: 61 LKIPNFKKYMSKSSP------TTNKVFSYFVAGTMGLGSAVGAKATVQDFLVNMSASADV 114
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK 126
LA A +E+ L IPEG++V KWRGKP+FIRHRT EI + LRDPQ D DRV+
Sbjct: 115 LAQAKVEIALGSIPEGKNVIIKWRGKPVFIRHRTADEIKEANEIDWKTLRDPQPDEDRVQ 174
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP YQF
Sbjct: 175 KPEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPAYQFP 234
Query: 187 DEGILI 192
D+ L+
Sbjct: 235 DDDTLV 240
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Query: 200 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 259
++ P+F KY +P T K F+Y +AG + V AK+ V F+ +MSASADV
Sbjct: 61 LKIPNFKKYMSKSSP------TTNKVFSYFVAGTMGLGSAVGAKATVQDFLVNMSASADV 114
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
LA A +E+ L IPEG++V KWRGKP+FIRHR
Sbjct: 115 LAQAKVEIALGSIPEGKNVIIKWRGKPVFIRHR 147
>gi|213402207|ref|XP_002171876.1| ubiquinol-cytochrome-c reductase complex subunit 5
[Schizosaccharomyces japonicus yFS275]
gi|211999923|gb|EEB05583.1| ubiquinol-cytochrome-c reductase complex subunit 5
[Schizosaccharomyces japonicus yFS275]
Length = 227
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 135/183 (73%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFSKYR D + F+Y++ G + A++ V+ F+SS SASADVLAM
Sbjct: 49 PDFSKYRTKSRSDAP------RVFSYVMVGALGALTAAGAQATVHDFLSSWSASADVLAM 102
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
+ +EVDL IPEG+++ KW GKP+FIRHRT EI+ + +IS LRDPQ DS RV+ P
Sbjct: 103 SKVEVDLKKIPEGKNLIIKWHGKPVFIRHRTAAEIEEANSVDISTLRDPQPDSARVQKPE 162
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+IG+CTHLGCVPI NAGD+GG++CPCHGSHYD SGR+R+GPAPTN+E+PPYQ ++G
Sbjct: 163 WLVMIGVCTHLGCVPIGNAGDYGGWFCPCHGSHYDISGRVRQGPAPTNLEIPPYQLNEDG 222
Query: 190 ILI 192
+I
Sbjct: 223 TII 225
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 6/102 (5%)
Query: 191 LIRMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
++R ++S PDFSKYR D + F+Y++ G + A++ V+ F+
Sbjct: 37 IVRPYSNSGDEIPDFSKYRTKSRSDAP------RVFSYVMVGALGALTAAGAQATVHDFL 90
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SS SASADVLAM+ +EVDL IPEG+++ KW GKP+FIRHR
Sbjct: 91 SSWSASADVLAMSKVEVDLKKIPEGKNLIIKWHGKPVFIRHR 132
>gi|403216619|emb|CCK71115.1| hypothetical protein KNAG_0G00580 [Kazachstania naganishii CBS
8797]
Length = 215
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 103/189 (54%), Positives = 135/189 (71%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFSK-YRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F R+D D+ + +TY + G ++ AKS V FISSMSAS
Sbjct: 32 STYRTPNFDDVLRKDGASDRS------RVYTYFMVGSLGLLSSAGAKSTVETFISSMSAS 85
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+LN IPEG++V KW+GKP+FIRHRT EI +S L+DPQ D+D
Sbjct: 86 ADVLAMAKVEVELNAIPEGKNVVVKWQGKPVFIRHRTPHEIQEANAVEMSVLKDPQTDAD 145
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RV+ P WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 146 RVQKPEWLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPQY 205
Query: 184 QFGDEGILI 192
+F + +++
Sbjct: 206 EFDGDKVIV 214
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSK-YRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F R+D D+ + +TY + G ++ AKS V FISSMSAS
Sbjct: 32 STYRTPNFDDVLRKDGASDRS------RVYTYFMVGSLGLLSSAGAKSTVETFISSMSAS 85
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+LN IPEG++V KW+GKP+FIRHR
Sbjct: 86 ADVLAMAKVEVELNAIPEGKNVVVKWQGKPVFIRHR 121
>gi|156843221|ref|XP_001644679.1| hypothetical protein Kpol_1056p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156115327|gb|EDO16821.1| hypothetical protein Kpol_1056p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 216
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 99/190 (52%), Positives = 141/190 (74%), Gaps = 7/190 (3%)
Query: 4 HSDIRTPDF-SKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
+S RTPDF S ++DR+ DK +++ Y + G ++ V AKS V F++SM+A
Sbjct: 32 NSTYRTPDFGSNVKQDRDADKS------RSYAYFMVGSLGLLSSVGAKSTVETFVTSMTA 85
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
S+D+LAMA +EV+L IPEG++V KW+GKP+FIRHRT +EI + +++ L+DPQ D+
Sbjct: 86 SSDILAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHRTPREIQEANSVDVASLKDPQTDA 145
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRV+DP WLV++GICTHLGCVPI +GD+ G++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 146 DRVQDPQWLVMLGICTHLGCVPIGESGDFDGWFCPCHGSHYDISGRIRKGPAPLNLEIPK 205
Query: 183 YQFGDEGILI 192
Y+ + +++
Sbjct: 206 YELDGDKLVV 215
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 67/97 (69%), Gaps = 7/97 (7%)
Query: 197 HSDIRTPDF-SKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
+S RTPDF S ++DR+ DK +++ Y + G ++ V AKS V F++SM+A
Sbjct: 32 NSTYRTPDFGSNVKQDRDADKS------RSYAYFMVGSLGLLSSVGAKSTVETFVTSMTA 85
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S+D+LAMA +EV+L IPEG++V KW+GKP+FIRHR
Sbjct: 86 SSDILAMAKVEVNLAAIPEGKNVVVKWQGKPVFIRHR 122
>gi|209867685|gb|ACI90372.1| ubiquinol-cytochrome c reductase-like protein [Philodina roseola]
Length = 274
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI+ P F YRR +P K + ++Y+ G +V AK +V +
Sbjct: 79 AHTDIQVPSFDYYRRKARMDPSKSYRDAPDTTAPYSYLAPIGLAVTSAYMAKYIVRDIAA 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+ + DV+++A +E+ L +PEG++ F+WR KP+F+RHRT +EI E+ N+SQLR P
Sbjct: 139 FVGPAKDVMSLAKVEISLAAVPEGKNAVFEWRNKPIFVRHRTPEEIAREEGVNVSQLRHP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q DS+RVK P WL+++GICTHLGC+PIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QPDSERVKKPEWLIVVGICTHLGCIPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
+VP Y F DE +I
Sbjct: 259 DVPQYVFKDESTVI 272
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI+ P F YRR +P K + ++Y+ G +V AK +V +
Sbjct: 79 AHTDIQVPSFDYYRRKARMDPSKSYRDAPDTTAPYSYLAPIGLAVTSAYMAKYIVRDIAA 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ + DV+++A +E+ L +PEG++ F+WR KP+F+RHR
Sbjct: 139 FVGPAKDVMSLAKVEISLAAVPEGKNAVFEWRNKPIFVRHR 179
>gi|342885674|gb|EGU85656.1| hypothetical protein FOXB_03802 [Fusarium oxysporum Fo5176]
Length = 254
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 136/204 (66%), Gaps = 25/204 (12%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV-------------- 53
+ P+F KY + ET+ K ++Y + G V AKS V
Sbjct: 55 QIPNFGKYVSSGS------ETKNKLYSYFMVGALGAVSAAGAKSTVQACWHDVRDGQLMV 108
Query: 54 -----NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQ 108
+F+ +MSASADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHRTQ EID
Sbjct: 109 TDDGMTEFLVNMSASADVLAMAKVEVDLSSIPEGKNVIIKWRGKPVFIRHRTQDEIDQAN 168
Query: 109 NTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGR 168
NIS LRDP+ DS RVK+P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR
Sbjct: 169 KVNISALRDPEEDSARVKNPEWLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGR 228
Query: 169 IRKGPAPTNMEVPPYQFGDEGILI 192
IRKGPAP N+E+P Y F ++G L+
Sbjct: 229 IRKGPAPLNLEIPEYDFPEDGKLV 252
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 25/111 (22%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV-------------- 246
+ P+F KY + ET+ K ++Y + G V AKS V
Sbjct: 55 QIPNFGKYVSSGS------ETKNKLYSYFMVGALGAVSAAGAKSTVQACWHDVRDGQLMV 108
Query: 247 -----NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F+ +MSASADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHR
Sbjct: 109 TDDGMTEFLVNMSASADVLAMAKVEVDLSSIPEGKNVIIKWRGKPVFIRHR 159
>gi|452838512|gb|EME40452.1| hypothetical protein DOTSEDRAFT_74131 [Dothistroma septosporum
NZE10]
Length = 241
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 132/191 (69%), Gaps = 8/191 (4%)
Query: 3 AHSDIRT-PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+H D P F+KYR ET K F Y + G + + AK+ V F+ +MS
Sbjct: 56 SHQDTTAIPSFAKYR-------AGNETGNKMFQYFMVGAFGGLSALGAKNTVQDFLVNMS 108
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
ASADVLA A +EVDL IPEG++V KWRGKP+FIRHRT EI ++ + QLRDPQ D
Sbjct: 109 ASADVLAQAKVEVDLASIPEGKNVIIKWRGKPVFIRHRTGDEIKEAEDYDWKQLRDPQPD 168
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
SDRVK P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR+RKGPAP N+EVP
Sbjct: 169 SDRVKKPEWLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRVRKGPAPLNLEVP 228
Query: 182 PYQFGDEGILI 192
Y F ++ L+
Sbjct: 229 EYDFPEDNALV 239
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 59/98 (60%), Gaps = 8/98 (8%)
Query: 196 AHSDIRT-PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+H D P F+KYR ET K F Y + G + + AK+ V F+ +MS
Sbjct: 56 SHQDTTAIPSFAKYR-------AGNETGNKMFQYFMVGAFGGLSALGAKNTVQDFLVNMS 108
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLA A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 109 ASADVLAQAKVEVDLASIPEGKNVIIKWRGKPVFIRHR 146
>gi|238880847|gb|EEQ44485.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Candida
albicans WO-1]
Length = 213
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 133/187 (71%), Gaps = 6/187 (3%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ + PD+S Y +++ GQ + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDYSSYLNNKS---GQGS---RNFTYFMVGSMGLLSAAGAKSTVEAFLSSFAASAD 84
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EV L IPEG++V KW+GKP+FIRHRT EI+ +I LRDPQ D+DRV
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHRTADEIEEANQVDIKTLRDPQNDADRV 144
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F
Sbjct: 145 KKPEWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYDF 204
Query: 186 GDEGILI 192
D+ L+
Sbjct: 205 TDDETLL 211
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 6/94 (6%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ + PD+S Y +++ GQ + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDYSSYLNNKS---GQGS---RNFTYFMVGSMGLLSAAGAKSTVEAFLSSFAASAD 84
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 85 VLAMAKVEVKLGAIPEGKNVIIKWQGKPVFIRHR 118
>gi|308492381|ref|XP_003108381.1| CRE-ISP-1 protein [Caenorhabditis remanei]
gi|308249229|gb|EFO93181.1| CRE-ISP-1 protein [Caenorhabditis remanei]
Length = 276
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 137/196 (69%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
LAH+D+ PD + YRRD + P + E+ +R + + G V+ + K VV
Sbjct: 78 LAHTDVTFPDMTSYRRDSTKNTQTPARDTEDQRRALPSALYYGAGGVLSLWAGKEVVQTL 137
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
+S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HRT+ EI E+ ++ LR
Sbjct: 138 VSYKAMAADQRALASIEINMSDIPEGQTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLR 197
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D +RV+ W V+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 198 HPQHDDERVQKDEWSVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPL 257
Query: 177 NMEVPPYQFGDEGILI 192
N+ VP Y F D I+I
Sbjct: 258 NLHVPAYSFKDTTIVI 273
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 67/108 (62%), Gaps = 5/108 (4%)
Query: 190 ILIRMLAHSDIRTPDFSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKS 244
+ R LAH+D+ PD + YRRD + P + E+ +R + + G V+ + K
Sbjct: 73 VTSRRLAHTDVTFPDMTSYRRDSTKNTQTPARDTEDQRRALPSALYYGAGGVLSLWAGKE 132
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VV +S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HR
Sbjct: 133 VVQTLVSYKAMAADQRALASIEINMSDIPEGQTKTFEWRGKPVFVKHR 180
>gi|209867705|gb|ACI90391.1| ubiquinol-cytochrome c reductase-like protein [Philodina roseola]
Length = 269
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 134/194 (69%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI+ P F YRR D + ++Y+ G +V AK +V ++
Sbjct: 74 AHTDIQVPSFDYYRRKARLDSSKSYRDSADATAPYSYLAPIGLAVTSAYMAKYIVRDIVN 133
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+ + DV+++A +E+ L+ +PEG++ F+WR KP+F+RHRT +EI E+ N+SQLR P
Sbjct: 134 FVGPAKDVMSLAKVEISLSAVPEGKNAVFEWRNKPIFVRHRTPEEIAREEGVNVSQLRHP 193
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+ D+ RVK P WL+++GICTHLGC+PIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 194 ENDAQRVKKPEWLIVVGICTHLGCIPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 253
Query: 179 EVPPYQFGDEGILI 192
EVP Y F D+ ++
Sbjct: 254 EVPQYVFKDDSTVV 267
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQE----ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI+ P F YRR D + ++Y+ G +V AK +V ++
Sbjct: 74 AHTDIQVPSFDYYRRKARLDSSKSYRDSADATAPYSYLAPIGLAVTSAYMAKYIVRDIVN 133
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ + DV+++A +E+ L+ +PEG++ F+WR KP+F+RHR
Sbjct: 134 FVGPAKDVMSLAKVEISLSAVPEGKNAVFEWRNKPIFVRHR 174
>gi|14277716|pdb|1EZV|E Chain E, Structure Of The Yeast Cytochrome Bc1 Complex Co-
Crystallized With An Antibody Fv-Fragment
gi|20151122|pdb|1KYO|E Chain E, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
gi|20151133|pdb|1KYO|P Chain P, Yeast Cytochrome Bc1 Complex With Bound Substrate
Cytochrome C
gi|24158775|pdb|1KB9|E Chain E, Yeast Cytochrome Bc1 Complex
gi|34811040|pdb|1P84|E Chain E, Hdbt Inhibited Yeast Cytochrome Bc1 Complex
gi|145579630|pdb|2IBZ|E Chain E, Yeast Cytochrome Bc1 Complex With Stigmatellin
gi|188036284|pdb|3CX5|E Chain E, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core Interface
For Electron Transfer.
gi|188036295|pdb|3CX5|P Chain P, Structure Of Complex Iii With Bound Cytochrome C In
Reduced State And Definition Of A Minimal Core Interface
For Electron Transfer.
gi|188036307|pdb|3CXH|E Chain E, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome C
Bound And Definition Of A Minimal Core Interface For
Electron Transfer.
gi|188036318|pdb|3CXH|P Chain P, Structure Of Yeast Complex Iii With Isoform-2 Cytochrome C
Bound And Definition Of A Minimal Core Interface For
Electron Transfer
Length = 185
Score = 227 bits (579), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 137/189 (72%), Gaps = 7/189 (3%)
Query: 5 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 2 STYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 55
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D+D
Sbjct: 56 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTDAD 115
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 116 RVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAY 175
Query: 184 QFGDEGILI 192
+F + +++
Sbjct: 176 EFDGDKVIV 184
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 2 STYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 55
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 56 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 91
>gi|361128788|gb|EHL00714.1| putative Cytochrome b-c1 complex subunit Rieske, mitochondrial
[Glarea lozoyensis 74030]
Length = 229
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/185 (54%), Positives = 128/185 (69%), Gaps = 13/185 (7%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KYR K F Y + G + AK+ V F+ +MSASADVL
Sbjct: 56 KIPDFGKYRS-------------KIFQYFMVGTMGALTAAGAKATVQDFLVNMSASADVL 102
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL+ I EG++V KWRGKP+FIRHRT EI +N + LRDPQ+D+DRV+
Sbjct: 103 AMAKVEVDLSTIAEGKNVIIKWRGKPVFIRHRTADEIKQAENVKVESLRDPQSDADRVQK 162
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 163 PEWLVMVGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 222
Query: 188 EGILI 192
+ L+
Sbjct: 223 DNSLV 227
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 13/92 (14%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KYR K F Y + G + AK+ V F+ +MSASADVL
Sbjct: 56 KIPDFGKYRS-------------KIFQYFMVGTMGALTAAGAKATVQDFLVNMSASADVL 102
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDL+ I EG++V KWRGKP+FIRHR
Sbjct: 103 AMAKVEVDLSTIAEGKNVIIKWRGKPVFIRHR 134
>gi|409051290|gb|EKM60766.1| hypothetical protein PHACADRAFT_168084 [Phanerochaete carnosa
HHB-10118-sp]
Length = 281
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 133/186 (71%), Gaps = 8/186 (4%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS Y + + T+ + Y + G V+ AKS V +F++SMSASADVL
Sbjct: 101 QVPDFSNY-------EAESPTRNRNVAYAMIGTMGVLSASVAKSTVTEFLASMSASADVL 153
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A +E++L IPEG++V KWRGKP+FIRHRT EI+ +NT+ LRDP++D R K
Sbjct: 154 ALAKVEIELASIPEGKNVVIKWRGKPVFIRHRTADEIEEARNTDWKTLRDPESDEQRAKK 213
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 214 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPNYDFNE 273
Query: 188 -EGILI 192
EG L+
Sbjct: 274 AEGKLV 279
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 65/105 (61%), Gaps = 12/105 (11%)
Query: 193 RMLAHSDIR-----TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
R L+ S +R PDFS Y + + T+ + Y + G V+ AKS V
Sbjct: 88 RFLSTSAVRRDAPQVPDFSNY-------EAESPTRNRNVAYAMIGTMGVLSASVAKSTVT 140
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F++SMSASADVLA+A +E++L IPEG++V KWRGKP+FIRHR
Sbjct: 141 EFLASMSASADVLALAKVEIELASIPEGKNVVIKWRGKPVFIRHR 185
>gi|255079494|ref|XP_002503327.1| predicted protein [Micromonas sp. RCC299]
gi|226518593|gb|ACO64585.1| predicted protein [Micromonas sp. RCC299]
Length = 267
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 135/179 (75%), Gaps = 1/179 (0%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
T D + + DK + ++R AFTYM+ G V+ + V +F+ SMSASADVLA
Sbjct: 83 TADIKYDESNHSVDKPGDPSKR-AFTYMVLTGGRVIYASALRLAVLKFLLSMSASADVLA 141
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
+A++EVDL I GQ+VT KWRGKP+FIR RT+ EI+ E +++ LRDPQAD+DR ++P
Sbjct: 142 LASLEVDLGKIESGQTVTVKWRGKPVFIRRRTEGEIEREVAVDVASLRDPQADADRAQNP 201
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
W+V++G+CTHLGCVPI+NAGD+ G++CPCHGSHYDASGRIRKGPAP N+EVP Y+F D
Sbjct: 202 EWMVLVGVCTHLGCVPISNAGDYNGWFCPCHGSHYDASGRIRKGPAPYNLEVPEYKFMD 260
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
T D + + DK + ++R AFTYM+ G V+ + V +F+ SMSASADVLA
Sbjct: 83 TADIKYDESNHSVDKPGDPSKR-AFTYMVLTGGRVIYASALRLAVLKFLLSMSASADVLA 141
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A++EVDL I GQ+VT KWRGKP+FIR R
Sbjct: 142 LASLEVDLGKIESGQTVTVKWRGKPVFIRRR 172
>gi|365766009|gb|EHN07510.1| Rip1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 201
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 137/191 (71%), Gaps = 7/191 (3%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 16 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 69
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAM +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 70 ATADVLAMTKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTD 129
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P
Sbjct: 130 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIP 189
Query: 182 PYQFGDEGILI 192
Y+F + +++
Sbjct: 190 AYEFDGDKVIV 200
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 16 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 69
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAM +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 70 ATADVLAMTKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 107
>gi|398392653|ref|XP_003849786.1| hypothetical protein MYCGRDRAFT_75376 [Zymoseptoria tritici IPO323]
gi|339469663|gb|EGP84762.1| hypothetical protein MYCGRDRAFT_75376 [Zymoseptoria tritici IPO323]
Length = 240
Score = 227 bits (578), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 128/183 (69%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P F KYR ET K F Y + G V + AK+ V F+ +MSASADVLA
Sbjct: 62 PSFQKYRSSGG------ETGNKLFQYFMVGAMGGVSALGAKNTVQDFLVNMSASADVLAQ 115
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDL IPEG++V KWRGKP+FIRHRT EI + + +LRDPQ D+DRVK P
Sbjct: 116 AKVEVDLASIPEGKNVIIKWRGKPVFIRHRTGDEIKEAEAYDWKKLRDPQPDADRVKKPE 175
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++G
Sbjct: 176 WLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYDFPEDG 235
Query: 190 ILI 192
L+
Sbjct: 236 ALV 238
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P F KYR ET K F Y + G V + AK+ V F+ +MSASADVLA
Sbjct: 62 PSFQKYRSSGG------ETGNKLFQYFMVGAMGGVSALGAKNTVQDFLVNMSASADVLAQ 115
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 116 AKVEVDLASIPEGKNVIIKWRGKPVFIRHR 145
>gi|189503108|gb|ACE06935.1| unknown [Schistosoma japonicum]
gi|226466955|emb|CAX75958.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
gi|226466957|emb|CAX75959.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
gi|226466959|emb|CAX75960.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
gi|226466961|emb|CAX75961.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
gi|226471514|emb|CAX70838.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
Length = 270
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 135/197 (68%), Gaps = 6/197 (3%)
Query: 2 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR+ +EI E+ ++ LR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHRSAEEIARERAVPLTSLR 191
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAP 175
DPQ D DRVK+ WL+ +G+CTHLGC+PIA++GD+ GGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 192 DPQKDEDRVKEDKWLICVGVCTHLGCIPIAHSGDFPGGYYCPCHGSHYDASGRIRKGPAP 251
Query: 176 TNMEVPPYQFGDEGILI 192
N+EVP Y+F DE +I
Sbjct: 252 LNLEVPQYKFVDENTVI 268
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 195 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 249
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 250 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHR 174
>gi|406868688|gb|EKD21725.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 233
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 127/187 (67%), Gaps = 10/187 (5%)
Query: 8 RTPDFSKYRRDR--NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ PDFS YR NP+ Y + G + AK+ V F+ +MSASAD
Sbjct: 53 KIPDFSNYRSKSGSNPNL--------LIQYFMVGTMGALTAAGAKATVQDFLVNMSASAD 104
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EVDL IPEG++V KWRGKP+FIRHRT EI +N + LRDPQ D DRV
Sbjct: 105 VLAMAKVEVDLAAIPEGKNVIVKWRGKPVFIRHRTADEIKDAENVKVESLRDPQKDEDRV 164
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y F
Sbjct: 165 KKPEWLVMVGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEYDF 224
Query: 186 GDEGILI 192
+E L+
Sbjct: 225 AEETSLV 231
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 56/94 (59%), Gaps = 10/94 (10%)
Query: 201 RTPDFSKYRRDR--NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ PDFS YR NP+ Y + G + AK+ V F+ +MSASAD
Sbjct: 53 KIPDFSNYRSKSGSNPNL--------LIQYFMVGTMGALTAAGAKATVQDFLVNMSASAD 104
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 105 VLAMAKVEVDLAAIPEGKNVIVKWRGKPVFIRHR 138
>gi|226466963|emb|CAX75962.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
[Schistosoma japonicum]
Length = 270
Score = 227 bits (578), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 135/197 (68%), Gaps = 6/197 (3%)
Query: 2 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR+ +EI E+ ++ LR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHRSAEEIARERAVPLTSLR 191
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAP 175
DPQ D DRVK+ WL+ +G+CTHLGC+PIA++GD+ GGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 192 DPQKDEDRVKEDKWLICVGVCTHLGCIPIAHSGDFPGGYYCPCHGSHYDASGRIRKGPAP 251
Query: 176 TNMEVPPYQFGDEGILI 192
N+EVP Y+F DE +I
Sbjct: 252 LNLEVPQYKFVDENTVI 268
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 195 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 249
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 250 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHR 174
>gi|393247691|gb|EJD55198.1| ubiquinol-cytochrome c r [Auricularia delicata TFB-10046 SS5]
Length = 287
Score = 226 bits (577), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 131/183 (71%), Gaps = 7/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF+ YR E+ +A +Y + G +V AKS V +F+ SM+ASADVLA+
Sbjct: 111 PDFTPYRT-------SNESGHRAMSYFMIGSMGIVAASAAKSSVTEFLGSMAASADVLAL 163
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +E++L IPEG++V KWRGKP+FIRHRT EI+ + + LRDP+ D DR K+P
Sbjct: 164 AKVELELGAIPEGKNVIIKWRGKPVFIRHRTPDEIEEAKKVDWKTLRDPERDEDRAKEPE 223
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+PP+ F D
Sbjct: 224 WLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPPHSFSDGK 283
Query: 190 ILI 192
+++
Sbjct: 284 LIV 286
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 59/90 (65%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF+ YR E+ +A +Y + G +V AKS V +F+ SM+ASADVLA+
Sbjct: 111 PDFTPYRT-------SNESGHRAMSYFMIGSMGIVAASAAKSSVTEFLGSMAASADVLAL 163
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +E++L IPEG++V KWRGKP+FIRHR
Sbjct: 164 AKVELELGAIPEGKNVIIKWRGKPVFIRHR 193
>gi|366995755|ref|XP_003677641.1| hypothetical protein NCAS_0G04020 [Naumovozyma castellii CBS 4309]
gi|342303510|emb|CCC71289.1| hypothetical protein NCAS_0G04020 [Naumovozyma castellii CBS 4309]
Length = 217
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 138/192 (71%), Gaps = 7/192 (3%)
Query: 2 LAHSDIRTPDFSKYRRDR-NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
+A S +TPDF ++ N DK +++ Y + G ++ AKS V FISSM
Sbjct: 31 IAKSTYQTPDFDDVLKEHGNSDKS------RSYAYFMIGSMGLLSSAGAKSTVETFISSM 84
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
SAS+DVLAMA +EV+L+ IP G++V KW+GKP+FIRHRTQ EID +++L+DPQ
Sbjct: 85 SASSDVLAMAKVEVNLSSIPLGKNVVVKWQGKPVFIRHRTQGEIDEANEVQMNELKDPQL 144
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
DSDRVK P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+
Sbjct: 145 DSDRVKQPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEI 204
Query: 181 PPYQFGDEGILI 192
P Y+ + +++
Sbjct: 205 PQYELDGDKLIV 216
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 7/99 (7%)
Query: 195 LAHSDIRTPDFSKYRRDR-NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
+A S +TPDF ++ N DK +++ Y + G ++ AKS V FISSM
Sbjct: 31 IAKSTYQTPDFDDVLKEHGNSDKS------RSYAYFMIGSMGLLSSAGAKSTVETFISSM 84
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SAS+DVLAMA +EV+L+ IP G++V KW+GKP+FIRHR
Sbjct: 85 SASSDVLAMAKVEVNLSSIPLGKNVVVKWQGKPVFIRHR 123
>gi|392571789|gb|EIW64961.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trametes
versicolor FP-101664 SS1]
Length = 281
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 131/186 (70%), Gaps = 8/186 (4%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY + + E + Y + G ++ AKS V +F+++MSASADVL
Sbjct: 101 QVPDFSKY-------EAKSEGTNRGLAYFMIGSLGLLSASAAKSTVTEFLATMSASADVL 153
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDL IPEG++V KWRGKP+FIRHRT EI+ + + LRDP++D R K
Sbjct: 154 AMARVEVDLAAIPEGKNVIIKWRGKPVFIRHRTTGEIEEAREYDWKSLRDPESDEQRTKK 213
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +
Sbjct: 214 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPTYDFNE 273
Query: 188 -EGILI 192
EG L+
Sbjct: 274 AEGKLV 279
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 13/110 (11%)
Query: 189 GILIRMLAHSDI------RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCA 242
G+ R L H+ + PDFSKY + + E + Y + G ++ A
Sbjct: 83 GVFQRSLIHTSSVARDAPQVPDFSKY-------EAKSEGTNRGLAYFMIGSLGLLSASAA 135
Query: 243 KSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
KS V +F+++MSASADVLAMA +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 136 KSTVTEFLATMSASADVLAMARVEVDLAAIPEGKNVIIKWRGKPVFIRHR 185
>gi|407919784|gb|EKG13007.1| hypothetical protein MPH_09827 [Macrophomina phaseolina MS6]
Length = 238
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 130/188 (69%), Gaps = 6/188 (3%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
++I T + KYR ET K F Y + G + + AK+ V F+ +MSASA
Sbjct: 55 TNIPTTAWKKYRSSSG------ETGNKVFQYFMVGSMGALSALGAKNTVQDFLVNMSASA 108
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA A +E+DL IPEG++V KWRGKP+FIRHRT EI ++T LRDPQ D DR
Sbjct: 109 DVLAQAKVEIDLEAIPEGKNVIIKWRGKPVFIRHRTSDEIQEAESTKWESLRDPQPDGDR 168
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y
Sbjct: 169 VKKPEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYS 228
Query: 185 FGDEGILI 192
F ++G ++
Sbjct: 229 FPEDGKVV 236
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
++I T + KYR ET K F Y + G + + AK+ V F+ +MSASA
Sbjct: 55 TNIPTTAWKKYRSSSG------ETGNKVFQYFMVGSMGALSALGAKNTVQDFLVNMSASA 108
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 109 DVLAQAKVEIDLEAIPEGKNVIIKWRGKPVFIRHR 143
>gi|451856335|gb|EMD69626.1| hypothetical protein COCSADRAFT_78765 [Cochliobolus sativus ND90Pr]
gi|452003414|gb|EMD95871.1| hypothetical protein COCHEDRAFT_1127079 [Cochliobolus
heterostrophus C5]
Length = 233
Score = 226 bits (576), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 132/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI ++T LRDPQ DS RV+
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTEDEIKEAEDTKWESLRDPQPDSARVQK 166
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +
Sbjct: 167 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPSYDFPE 226
Query: 188 EGILI 192
EG ++
Sbjct: 227 EGKVV 231
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKVFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 138
>gi|353242243|emb|CCA73903.1| probable ubiquinol-cytochrome-c reductase Rieske iron-sulfur
protein [Piriformospora indica DSM 11827]
Length = 291
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/185 (52%), Positives = 135/185 (72%), Gaps = 9/185 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P+F Y+ +NP+ G +A +Y + G ++ AK+ + F+++MSASADVLA+
Sbjct: 113 PNFEPYK-SKNPENG------RALSYFMVGSLGLLSASMAKASITNFLATMSASADVLAL 165
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV L IPEG++V KWRGKP+FIRHRT EI+ +N ++ LRDP+ D R K+P
Sbjct: 166 AKVEVGLGSIPEGKNVIVKWRGKPVFIRHRTADEIEEAKNVDVKSLRDPETDEARTKNPE 225
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF--GD 187
WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+EVPPY+ G+
Sbjct: 226 WLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPPYELNEGE 285
Query: 188 EGILI 192
E ++I
Sbjct: 286 EKVII 290
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P+F Y+ +NP+ G +A +Y + G ++ AK+ + F+++MSASADVLA+
Sbjct: 113 PNFEPYK-SKNPENG------RALSYFMVGSLGLLSASMAKASITNFLATMSASADVLAL 165
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV L IPEG++V KWRGKP+FIRHR
Sbjct: 166 AKVEVGLGSIPEGKNVIVKWRGKPVFIRHR 195
>gi|195616520|gb|ACG30090.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Zea mays]
Length = 233
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 131/185 (70%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKMFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A A +E+DL IPEG++V KWRGKP+FIRHRT+ EI +T LRDPQ D DRV+
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHRTESEIKEADDTKWESLRDPQPDKDRVQK 166
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F +
Sbjct: 167 PEWLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPAYDFPE 226
Query: 188 EGILI 192
EG ++
Sbjct: 227 EGKVV 231
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ P F+ YR +KG E T K F Y + G + + AK+ V F+ +MSASADVL
Sbjct: 53 KIPSFAAYR-----NKGGE-TGPKMFQYFMVGTMGALSALGAKATVQDFLVNMSASADVL 106
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A +E+DL IPEG++V KWRGKP+FIRHR
Sbjct: 107 AQAKVEIDLAAIPEGKNVIIKWRGKPVFIRHR 138
>gi|453081621|gb|EMF09670.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Mycosphaerella populorum SO2202]
Length = 245
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 129/183 (70%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P F YR +KG E T K F Y + G + + AK+ V F+ +MSASADVLA
Sbjct: 67 PSFKSYR-----NKGSE-TSNKMFQYFMVGAFGGISALGAKNTVQDFLVNMSASADVLAQ 120
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDL IPEG++V KWRGKP+FIRHRT EI ++ + LRDPQ DSDRVK P
Sbjct: 121 AKVEVDLASIPEGKNVIIKWRGKPVFIRHRTADEIKEAEDLDWKTLRDPQPDSDRVKKPE 180
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR+R+GPAP N+EVP Y F ++
Sbjct: 181 WLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRVRRGPAPLNLEVPAYDFPEDN 240
Query: 190 ILI 192
L+
Sbjct: 241 ALV 243
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P F YR +KG E T K F Y + G + + AK+ V F+ +MSASADVLA
Sbjct: 67 PSFKSYR-----NKGSE-TSNKMFQYFMVGAFGGISALGAKNTVQDFLVNMSASADVLAQ 120
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 121 AKVEVDLASIPEGKNVIIKWRGKPVFIRHR 150
>gi|17540418|ref|NP_501361.1| Protein ISP-1 [Caenorhabditis elegans]
gi|351065443|emb|CCD61411.1| Protein ISP-1 [Caenorhabditis elegans]
Length = 276
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 135/196 (68%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRN-----PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
LAH+D+ PD S YRRD P + E+ +R T + G V+ + K VV
Sbjct: 78 LAHTDVTFPDMSNYRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKEVVQTL 137
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
+S + +AD A+A+IE+++ IPEG++ TF+WRGKP+F++HRT+ EI E+ ++ LR
Sbjct: 138 VSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLR 197
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D +RV+ W V+IG+CTHLGCVPIA+AGD+GGYYCPCHGSHYDASGRIRKGPAP
Sbjct: 198 HPQHDDERVQKDEWSVVIGVCTHLGCVPIADAGDYGGYYCPCHGSHYDASGRIRKGPAPL 257
Query: 177 NMEVPPYQFGDEGILI 192
N+ VP Y F D I+I
Sbjct: 258 NLHVPAYSFKDATIVI 273
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 190 ILIRMLAHSDIRTPDFSKYRRDRN-----PDKGQEETQRKAFTYMIAGGSSVVGMVCAKS 244
+ R LAH+D+ PD S YRRD P + E+ +R T + G V+ + K
Sbjct: 73 VTSRRLAHTDVTFPDMSNYRRDSTKNTQVPARDTEDQRRALPTALYYGAGGVLSLWAGKE 132
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VV +S + +AD A+A+IE+++ IPEG++ TF+WRGKP+F++HR
Sbjct: 133 VVQTLVSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVFVKHR 180
>gi|294658536|ref|XP_460873.2| DEHA2F11726p [Debaryomyces hansenii CBS767]
gi|202953204|emb|CAG89223.2| DEHA2F11726p [Debaryomyces hansenii CBS767]
Length = 213
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 137/190 (72%), Gaps = 6/190 (3%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A S PDFS Y +R+ +K + FTY + G ++G V AKS V F+SS+SA
Sbjct: 28 ALSKYDQPDFSSYLNNRSQEK------NRNFTYFMVGSMGLLGTVGAKSTVESFLSSLSA 81
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA +EV L IPEG++V KW+GKP+FIRHRTQ EID ++ LRDP+ D+
Sbjct: 82 SADVLAMAKVEVKLGAIPEGKNVIVKWQGKPVFIRHRTQDEIDEANEVKVANLRDPETDA 141
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVK P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P
Sbjct: 142 DRVKKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRRGPAPLNLEIPA 201
Query: 183 YQFGDEGILI 192
Y F D+ L+
Sbjct: 202 YDFTDDETLM 211
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 64/97 (65%), Gaps = 6/97 (6%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A S PDFS Y +R+ +K + FTY + G ++G V AKS V F+SS+SA
Sbjct: 28 ALSKYDQPDFSSYLNNRSQEK------NRNFTYFMVGSMGLLGTVGAKSTVESFLSSLSA 81
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA +EV L IPEG++V KW+GKP+FIRHR
Sbjct: 82 SADVLAMAKVEVKLGAIPEGKNVIVKWQGKPVFIRHR 118
>gi|110456587|gb|ABG74729.1| putative Rieske iron-sulfur protein, partial [Diaphorina citri]
Length = 132
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/130 (77%), Positives = 112/130 (86%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SADVLAMA IEV L IPEG++VTFKWRGKPLFIRHR EI EQ IS LRDPQADS
Sbjct: 1 SADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHRAAAEIAKEQAVAISTLRDPQADS 60
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
DRVKDP WLV+IG+CTHLGCVP+ANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+EVP
Sbjct: 61 DRVKDPKWLVLIGVCTHLGCVPVANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPK 120
Query: 183 YQFGDEGILI 192
Y+F + G+L+
Sbjct: 121 YEFPEPGLLV 130
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/37 (83%), Positives = 33/37 (89%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SADVLAMA IEV L IPEG++VTFKWRGKPLFIRHR
Sbjct: 1 SADVLAMAKIEVKLADIPEGRNVTFKWRGKPLFIRHR 37
>gi|67523701|ref|XP_659910.1| hypothetical protein AN2306.2 [Aspergillus nidulans FGSC A4]
gi|40745261|gb|EAA64417.1| hypothetical protein AN2306.2 [Aspergillus nidulans FGSC A4]
Length = 238
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 129/200 (64%), Gaps = 16/200 (8%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
A ++ PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSA
Sbjct: 43 AKDTLKVPDFSKYSSKKAPRSNQ------VFSYFVAGTMGLASAVGAKATVQDFLVNMSA 96
Query: 63 SADVLAMATIEVDLNLIPEG----------QSVTFKWRGKPLFIRHRTQKEIDTEQNTNI 112
SADVLA A +E+ L IPEG Q V KWRGKP+FIRHRTQ EI Q +
Sbjct: 97 SADVLAQAKVEIGLATIPEGKNALRLNRSFQQVIIKWRGKPVFIRHRTQDEIKEAQEYDW 156
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
LRDPQ D +RV+ WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKG
Sbjct: 157 KTLRDPQPDEERVQKAEWLVMLGVCTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKG 216
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP Y F DE LI
Sbjct: 217 PAPLNLEVPQYNFPDEETLI 236
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 59/107 (55%), Gaps = 16/107 (14%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
A ++ PDFSKY + P Q F+Y +AG + V AK+ V F+ +MSA
Sbjct: 43 AKDTLKVPDFSKYSSKKAPRSNQ------VFSYFVAGTMGLASAVGAKATVQDFLVNMSA 96
Query: 256 SADVLAMATIEVDLNLIPEG----------QSVTFKWRGKPLFIRHR 292
SADVLA A +E+ L IPEG Q V KWRGKP+FIRHR
Sbjct: 97 SADVLAQAKVEIGLATIPEGKNALRLNRSFQQVIIKWRGKPVFIRHR 143
>gi|400600370|gb|EJP68044.1| cytochrome b-c1 complex subunit Rieske [Beauveria bassiana ARSEF
2860]
Length = 252
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 131/205 (63%), Gaps = 26/205 (12%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY + E K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 52 QIPDFGKYM------SAKPEGSNKLFSYFMVGAMGALTAAGAKSTVQEFLVNMSASADVL 105
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI ++ LRDPQ+D DRV+
Sbjct: 106 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHRTADEIAEANKVEVASLRDPQSDDDRVQK 165
Query: 128 PSWLVI--------------------IGICTHLGCVPIANAGDWGGYYCPCHGSHYDASG 167
P WLV+ IG+CTHLGCVPI AGD+GG++CPCHGSHYD SG
Sbjct: 166 PEWLVMLGKSRKDHPDSHGREKLTPSIGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISG 225
Query: 168 RIRKGPAPTNMEVPPYQFGDEGILI 192
RIR+GPAP N+E+P Y+F +E LI
Sbjct: 226 RIRRGPAPLNLEIPAYEFPEEDKLI 250
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY + E K F+Y + G + AKS V +F+ +MSASADVL
Sbjct: 52 QIPDFGKYM------SAKPEGSNKLFSYFMVGAMGALTAAGAKSTVQEFLVNMSASADVL 105
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 106 AMAKVEVDLNTIPEGKNVIIKWRGKPVFIRHR 137
>gi|388579153|gb|EIM19481.1| cytochrome b-c1 complex subunit Rieske [Wallemia sebi CBS 633.66]
Length = 201
Score = 224 bits (570), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 130/185 (70%), Gaps = 7/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFS YR + KAF+Y + G ++ AK+ V +S++SASADVL
Sbjct: 23 QVPDFSPYR-------SKNTGSNKAFSYFMVGSMGLLSSAGAKATVTDILSNLSASADVL 75
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
A+A EVD++ IPEG++VT KWRGKP+FIRHRT EI+ +S LRDPQ D+DR +
Sbjct: 76 ALAKAEVDISAIPEGKNVTIKWRGKPVFIRHRTASEIEEADKVEMSDLRDPQKDADRFEQ 135
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WLV++G+CTHLGCVPI AGD+GG+YCPCHGSHYD SGR RKGPAPTN+EVP Y +
Sbjct: 136 REWLVMLGVCTHLGCVPIGEAGDFGGWYCPCHGSHYDISGRARKGPAPTNLEVPVYSLNE 195
Query: 188 EGILI 192
+ ++I
Sbjct: 196 DKLVI 200
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFS YR + KAF+Y + G ++ AK+ V +S++SASADVL
Sbjct: 23 QVPDFSPYR-------SKNTGSNKAFSYFMVGSMGLLSSAGAKATVTDILSNLSASADVL 75
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A EVD++ IPEG++VT KWRGKP+FIRHR
Sbjct: 76 ALAKAEVDISAIPEGKNVTIKWRGKPVFIRHR 107
>gi|301112621|ref|XP_002998081.1| cytochrome b-c1 complex subunit Rieske, putative [Phytophthora
infestans T30-4]
gi|262112375|gb|EEY70427.1| cytochrome b-c1 complex subunit Rieske, putative [Phytophthora
infestans T30-4]
Length = 215
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AFTY + GG+ V A+ V +F+ SMSASADVLA+AT E DL+ I EG +VT
Sbjct: 48 DPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEGSTVT 107
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FI+HRT KEID ++ LRDP+ D+ RV+ P WLV++G+CTHLGCVP +
Sbjct: 108 VKWRGKPIFIKHRTTKEIDISNQVDVGNLRDPETDAVRVQKPEWLVVLGVCTHLGCVPTS 167
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
+AG++GG++CPCHGSHYD SGRIRKGPAP N+E+PPY+F D IL+
Sbjct: 168 DAGEYGGWFCPCHGSHYDLSGRIRKGPAPLNLEIPPYKFIEDNKILL 214
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AFTY + GG+ V A+ V +F+ SMSASADVLA+AT E DL+ I EG +VT
Sbjct: 48 DPSKRAFTYFMLGGARVAYATAARLAVVKFVGSMSASADVLALATAEFDLSNINEGSTVT 107
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FI+HR
Sbjct: 108 VKWRGKPIFIKHR 120
>gi|452978476|gb|EME78239.1| hypothetical protein MYCFIDRAFT_72052 [Pseudocercospora fijiensis
CIRAD86]
Length = 244
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 125/183 (68%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P F YR E K F Y + G + + AK+ V F+ +MSASADVLA
Sbjct: 66 PSFKNYRSSSG------EQGNKMFQYFMVGAFGGISALGAKNTVQDFLVNMSASADVLAQ 119
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDL IPEG++V KWRGKP+FIRHRT EI ++ + LRDPQ DSDRVK P
Sbjct: 120 AKVEVDLATIPEGKNVIIKWRGKPVFIRHRTADEIKQAEDFDWKTLRDPQPDSDRVKKPE 179
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++
Sbjct: 180 WLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEVPAYDFPEDN 239
Query: 190 ILI 192
L+
Sbjct: 240 ALV 242
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P F YR E K F Y + G + + AK+ V F+ +MSASADVLA
Sbjct: 66 PSFKNYRSSSG------EQGNKMFQYFMVGAFGGISALGAKNTVQDFLVNMSASADVLAQ 119
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 120 AKVEVDLATIPEGKNVIIKWRGKPVFIRHR 149
>gi|323456944|gb|EGB12810.1| hypothetical protein AURANDRAFT_52117 [Aureococcus anophagefferens]
Length = 217
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S++ + D+ +++DR + + FTY++ G + + + +FI++MSAS
Sbjct: 29 SELGSFDYG-FKKDRIAKTTSGAAENRGFTYLVMGSNKFIYASAVRIGALKFIATMSASK 87
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLA+A+ E D+ + EGQ++T KWRGKP+FIRHRT +EI + + +LRDPQ DS+R
Sbjct: 88 DVLALASAEFDVGAVEEGQTITVKWRGKPVFIRHRTAEEIAQSEAVTLDELRDPQLDSER 147
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V WLV++GICTHLGCVPIANAGD+GG++CPCHGSHYD SGRIRKGPAP N+E+PPY+
Sbjct: 148 VDTSEWLVVMGICTHLGCVPIANAGDYGGWFCPCHGSHYDVSGRIRKGPAPLNLEIPPYK 207
Query: 185 FGDEGILI 192
F D+ L+
Sbjct: 208 FTDDTNLL 215
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S++ + D+ +++DR + + FTY++ G + + + +FI++MSAS
Sbjct: 29 SELGSFDYG-FKKDRIAKTTSGAAENRGFTYLVMGSNKFIYASAVRIGALKFIATMSASK 87
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLA+A+ E D+ + EGQ++T KWRGKP+FIRHR
Sbjct: 88 DVLALASAEFDVGAVEEGQTITVKWRGKPVFIRHR 122
>gi|223997030|ref|XP_002288188.1| rieske iron-sulfur protein 1 [Thalassiosira pseudonana CCMP1335]
gi|220975296|gb|EED93624.1| rieske iron-sulfur protein 1 [Thalassiosira pseudonana CCMP1335]
Length = 168
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 124/162 (76%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E +R+AFTY++ G A+ +V +F+SSMSASADVLA+A+ E D+ + G+++T
Sbjct: 1 EPERRAFTYLLLSGVRFAYASTARVLVVKFVSSMSASADVLALASAEFDIGAVAPGKTIT 60
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIRHRT EI TE ++SQLRD + D DR P WLV++GICTHLGCVPI+
Sbjct: 61 VKWRGKPVFIRHRTPAEISTEAAVSLSQLRDEETDDDRTLKPEWLVVLGICTHLGCVPIS 120
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
AGD+ G++CPCHGSHYD SGRIRKGPAP N+EVPPY+F +E
Sbjct: 121 GAGDYNGWFCPCHGSHYDVSGRIRKGPAPLNLEVPPYKFTEE 162
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 53/73 (72%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E +R+AFTY++ G A+ +V +F+SSMSASADVLA+A+ E D+ + G+++T
Sbjct: 1 EPERRAFTYLLLSGVRFAYASTARVLVVKFVSSMSASADVLALASAEFDIGAVAPGKTIT 60
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 61 VKWRGKPVFIRHR 73
>gi|256082430|ref|XP_002577459.1| ubiquinol--cytochrome C reductase [Schistosoma mansoni]
gi|360044636|emb|CCD82184.1| ubiquinol--cytochrome C reductase [Schistosoma mansoni]
Length = 270
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 135/196 (68%), Gaps = 6/196 (3%)
Query: 3 AHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+D+ PDF+KYR + D E QRK F+Y + ++++ AK V FI
Sbjct: 73 AHTDVANVPDFTKYRLESTKDPQSRAADTEIQRKIFSYTMMFATAMIATTSAKYTVRMFI 132
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
+ S+ +A A+ EV+L IPEG++VT KWR KPLFIRHR+ +EI E+ + LRD
Sbjct: 133 EPLGPSSKTMAEASTEVNLASIPEGKNVTVKWRNKPLFIRHRSAEEIARERAVPLESLRD 192
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D DRVK WL+ +G+CTHLGCVP+A+AGD+ GGY+CPCHGSHYDASGR+RKGPAP
Sbjct: 193 PQLDQDRVKVDKWLICLGVCTHLGCVPVAHAGDFPGGYFCPCHGSHYDASGRVRKGPAPL 252
Query: 177 NMEVPPYQFGDEGILI 192
N+E+P Y+F DE +I
Sbjct: 253 NLEIPQYKFVDENTVI 268
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 196 AHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+D+ PDF+KYR + D E QRK F+Y + ++++ AK V FI
Sbjct: 73 AHTDVANVPDFTKYRLESTKDPQSRAADTEIQRKIFSYTMMFATAMIATTSAKYTVRMFI 132
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ S+ +A A+ EV+L IPEG++VT KWR KPLFIRHR
Sbjct: 133 EPLGPSSKTMAEASTEVNLASIPEGKNVTVKWRNKPLFIRHR 174
>gi|448521867|ref|XP_003868589.1| Rip1 ubiquinol cytochrome c-reductase [Candida orthopsilosis Co
90-125]
gi|380352929|emb|CCG25685.1| Rip1 ubiquinol cytochrome c-reductase [Candida orthopsilosis]
Length = 213
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/186 (55%), Positives = 133/186 (71%), Gaps = 6/186 (3%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+ + PDFS Y ++P + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDFSSYLNHKSPQGSRN------FTYFMVGSMGLLSAAGAKSTVESFLSSFAASAD 84
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAMA +EV L IP G++V KW+GKP+FIRHRT +EI+ + ++S+LRDPQ D+DRV
Sbjct: 85 VLAMAKVEVKLGAIPLGKNVIVKWQGKPVFIRHRTPEEIEEAEEVDVSKLRDPQKDADRV 144
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P WLV++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 145 KKPEWLVMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEVPEYSF 204
Query: 186 GDEGIL 191
D+ L
Sbjct: 205 PDDDTL 210
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 6/94 (6%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+ + PDFS Y ++P + FTY + G ++ AKS V F+SS +ASAD
Sbjct: 31 NYQQPDFSSYLNHKSPQGSRN------FTYFMVGSMGLLSAAGAKSTVESFLSSFAASAD 84
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAMA +EV L IP G++V KW+GKP+FIRHR
Sbjct: 85 VLAMAKVEVKLGAIPLGKNVIVKWQGKPVFIRHR 118
>gi|412991450|emb|CCO16295.1| predicted protein [Bathycoccus prasinos]
Length = 303
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 136/187 (72%), Gaps = 11/187 (5%)
Query: 10 PDFSK--YRRDR--NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
P++++ +R D+ +PDK +AFTY + G ++ + V +F+ SMSA+AD
Sbjct: 122 PNYAQENHRVDKIGDPDK-------RAFTYFVLTGGRMIYASAIRLAVLKFLMSMSATAD 174
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL+ I G + T KWRGKP+FIR RT EI E ++ +LRD QAD+DR
Sbjct: 175 VLALASLEVDLSKIQRGTTTTVKWRGKPVFIRRRTADEIAKENAVDLGELRDKQADADRT 234
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
++P WLV++G+CTHLGCVPIANAGD+ G++CPCHGSHYDASGRIRKGPAP N+EVP Y F
Sbjct: 235 QNPEWLVVVGVCTHLGCVPIANAGDYNGWFCPCHGSHYDASGRIRKGPAPENLEVPEYSF 294
Query: 186 GDEGILI 192
DE +I
Sbjct: 295 QDETTMI 301
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 11/94 (11%)
Query: 203 PDFSK--YRRDR--NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
P++++ +R D+ +PDK +AFTY + G ++ + V +F+ SMSA+AD
Sbjct: 122 PNYAQENHRVDKIGDPDK-------RAFTYFVLTGGRMIYASAIRLAVLKFLMSMSATAD 174
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL+ I G + T KWRGKP+FIR R
Sbjct: 175 VLALASLEVDLSKIQRGTTTTVKWRGKPVFIRRR 208
>gi|365991884|ref|XP_003672770.1| hypothetical protein NDAI_0L00420 [Naumovozyma dairenensis CBS 421]
gi|410729767|ref|XP_003671062.2| hypothetical protein NDAI_0G00430 [Naumovozyma dairenensis CBS 421]
gi|401779881|emb|CCD25819.2| hypothetical protein NDAI_0G00430 [Naumovozyma dairenensis CBS 421]
Length = 222
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 135/188 (71%), Gaps = 4/188 (2%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S +TP+F ++ + + + +++ Y + G ++ AKS V FISSMSASA
Sbjct: 38 STYKTPNFDDVLKEDHTNNDKS----RSYAYFMVGSLGLLSSAGAKSTVETFISSMSASA 93
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
DVLAMA IEV+L IP G++V KW+GKP+FIRHRT EI +++ L+DPQ DSDR
Sbjct: 94 DVLAMAKIEVNLATIPVGKNVVVKWQGKPVFIRHRTSHEIQEANEISMTDLKDPQTDSDR 153
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V++P WL+++GICTHLGCVPI +GD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+
Sbjct: 154 VQNPEWLIMLGICTHLGCVPIGESGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPNYE 213
Query: 185 FGDEGILI 192
F + ++I
Sbjct: 214 FDGDKVII 221
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S +TP+F ++ + + + +++ Y + G ++ AKS V FISSMSASA
Sbjct: 38 STYKTPNFDDVLKEDHTNNDKS----RSYAYFMVGSLGLLSSAGAKSTVETFISSMSASA 93
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
DVLAMA IEV+L IP G++V KW+GKP+FIRHR
Sbjct: 94 DVLAMAKIEVNLATIPVGKNVVVKWQGKPVFIRHR 128
>gi|148700440|gb|EDL32387.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1,
isoform CRA_c [Mus musculus]
Length = 135
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 115/133 (86%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDPQ
Sbjct: 1 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQ 60
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 61 HDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLE 120
Query: 180 VPPYQFGDEGILI 192
VP Y+F + +++
Sbjct: 121 VPAYEFTSDDVVV 133
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 36/40 (90%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 1 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 40
>gi|19112733|ref|NP_595941.1| ubiquinol-cytochrome-c reductase complex subunit 5
[Schizosaccharomyces pombe 972h-]
gi|12644395|sp|Q09154.2|UCRI_SCHPO RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|2956758|emb|CAA17904.1| ubiquinol-cytochrome-c reductase complex subunit 5
[Schizosaccharomyces pombe]
Length = 228
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS+Y+ D+ + +Y + G + A++ V+ F++S SASADVLAM
Sbjct: 51 PDFSEYQTKSTGDRS------RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAM 104
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
+ EVDL+ IPEG+++ KW+GKP+FIRHRT +EI + +IS LRDPQADSDRV+ P
Sbjct: 105 SKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPE 164
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+IG+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+ +P Y F
Sbjct: 165 WLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTFEGSK 224
Query: 190 ILI 192
I+I
Sbjct: 225 III 227
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 188 EGILIRMLAHSDIRT-------PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMV 240
+G ++ + + IRT PDFS+Y+ D+ + +Y + G +
Sbjct: 29 KGSMMTIPKFTSIRTYTDSPEMPDFSEYQTKSTGDRS------RVISYAMVGTMGALTAA 82
Query: 241 CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A++ V+ F++S SASADVLAM+ EVDL+ IPEG+++ KW+GKP+FIRHR
Sbjct: 83 GAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHR 134
>gi|409083123|gb|EKM83480.1| RIP1 ubiquinol-cytochrome-c reductase a Rieske iron-sulfur protein
of the mitochondrial cytochrome bc1 complex [Agaricus
bisporus var. burnettii JB137-S8]
Length = 205
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 131/179 (73%), Gaps = 8/179 (4%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDFSKYR + + ++ A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 27 VPDFSKYRTNIDSNR--------ALSYFVVGSLGVLSASVAKSSVSEFLQTMAASADVLA 78
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
+A +EVDL IPEG++V KWRGKP+FIRHRT EI+ ++ N RDPQ+D DRVK P
Sbjct: 79 LAKVEVDLTTIPEGKNVIIKWRGKPVFIRHRTAGEIEEARSANWKSFRDPQSDEDRVKKP 138
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR RKGPAP N+EVP Y+F +
Sbjct: 139 EWLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRARKGPAPLNLEVPAYEFTE 197
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDFSKYR + + ++ A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 27 VPDFSKYRTNIDSNR--------ALSYFVVGSLGVLSASVAKSSVSEFLQTMAASADVLA 78
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 79 LAKVEVDLTTIPEGKNVIIKWRGKPVFIRHR 109
>gi|90084707|dbj|BAE91195.1| unnamed protein product [Macaca fascicularis]
Length = 135
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 116/133 (87%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDPQ
Sbjct: 1 MSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVVLSQLRDPQ 60
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W+++IG+CTHLGCVPIANAGD+GG+YCPCHGSHYDASGRIR GPAP N+E
Sbjct: 61 HDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGFYCPCHGSHYDASGRIRLGPAPLNLE 120
Query: 180 VPPYQFGDEGILI 192
VPPY+F + ++
Sbjct: 121 VPPYEFTSDDTVV 133
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 38/40 (95%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA IE++L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 1 MSASADVLAMAKIEINLSDIPEGKNMTFKWRGKPLFVRHR 40
>gi|426201825|gb|EKV51748.1| RIP1 ubiquinol-cytochrome-c reductase [Agaricus bisporus var.
bisporus H97]
Length = 205
Score = 221 bits (563), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 131/179 (73%), Gaps = 8/179 (4%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDFSKYR + + ++ A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 27 VPDFSKYRTNIDSNR--------ALSYFVVGSLGVLSASVAKSSVSEFLQTMAASADVLA 78
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
+A +EVDL IPEG++V KWRGKP+FIRHRT EI+ ++ N RDPQ+D DRVK P
Sbjct: 79 LAKVEVDLTTIPEGKNVIIKWRGKPVFIRHRTAGEIEEARSANWKSFRDPQSDEDRVKKP 138
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR RKGPAP N+EVP Y+F +
Sbjct: 139 EWLIMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRARKGPAPLNLEVPAYEFTE 197
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDFSKYR + + ++ A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 27 VPDFSKYRTNIDSNR--------ALSYFVVGSLGVLSASVAKSSVSEFLQTMAASADVLA 78
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 79 LAKVEVDLTTIPEGKNVIIKWRGKPVFIRHR 109
>gi|449295701|gb|EMC91722.1| hypothetical protein BAUCODRAFT_79098 [Baudoinia compniacensis UAMH
10762]
Length = 245
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 126/184 (68%), Gaps = 8/184 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P F KYR ET K F Y + G + + AK V F+ +MSASADVLA
Sbjct: 68 PSFKKYRSG-------SETGNKVFQYFMVGAFGGLSALGAKDTVQNFLVNMSASADVLAQ 120
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EVDL IPEG++V KWRGKP+FIRHRT EI ++ + +LRDPQ D RVK P
Sbjct: 121 AKVEVDLASIPEGKNVIIKWRGKPVFIRHRTADEIKEAEDADWQKLRDPQPDDARVKKPE 180
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDE 188
WL+++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGR+RKGPAP N+EVP Y F DE
Sbjct: 181 WLIMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRVRKGPAPLNLEVPEYDFPTDE 240
Query: 189 GILI 192
++I
Sbjct: 241 SLVI 244
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P F KYR ET K F Y + G + + AK V F+ +MSASADVLA
Sbjct: 68 PSFKKYRSG-------SETGNKVFQYFMVGAFGGLSALGAKDTVQNFLVNMSASADVLAQ 120
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 121 AKVEVDLASIPEGKNVIIKWRGKPVFIRHR 150
>gi|307103822|gb|EFN52079.1| hypothetical protein CHLNCDRAFT_36997 [Chlorella variabilis]
Length = 249
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 125/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AFTY + G +G + V +F+ SM+A+ DVLAMA +EVDL+ I GQ+VT
Sbjct: 78 DPSKRAFTYFVLTGGRFIGAAAVRLAVLKFLLSMTATKDVLAMANLEVDLSNIQPGQTVT 137
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIRHRT +I +IS+LRDPQ DS R KDP+WL+++G+CTHLGCVP+
Sbjct: 138 VKWRGKPVFIRHRTAADIAAANEVDISKLRDPQPDSARTKDPNWLIVLGVCTHLGCVPLN 197
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+ ++CPCHGSHYD+SGRIRKGPAP N+EVP Y F D+G ++
Sbjct: 198 NAGDYNAWFCPCHGSHYDSSGRIRKGPAPYNLEVPDYVFLDDGKVL 243
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AFTY + G +G + V +F+ SM+A+ DVLAMA +EVDL+ I GQ+VT
Sbjct: 78 DPSKRAFTYFVLTGGRFIGAAAVRLAVLKFLLSMTATKDVLAMANLEVDLSNIQPGQTVT 137
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 138 VKWRGKPVFIRHR 150
>gi|397621444|gb|EJK66293.1| hypothetical protein THAOC_12795 [Thalassiosira oceanica]
Length = 249
Score = 220 bits (561), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/167 (58%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E +R+AFTY++ G A+ +V +F+SSMSASADVLA+A+ E D+ + +G+++T
Sbjct: 82 EPERRAFTYLLLSGVRFAYASTARVLVVKFVSSMSASADVLALASAEFDVGGVAQGKTIT 141
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIRHRT EI E +S LRD + D DR P WLV++GICTHLGCVPI+
Sbjct: 142 VKWRGKPVFIRHRTPAEISAEAGVALSSLRDEETDDDRTLKPEWLVVLGICTHLGCVPIS 201
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
AGD+ G++CPCHGSHYD SGRIRKGPAP N+E+PPY+F GD ILI
Sbjct: 202 GAGDYNGWFCPCHGSHYDISGRIRKGPAPLNLEIPPYKFTGDTKILI 248
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 54/73 (73%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E +R+AFTY++ G A+ +V +F+SSMSASADVLA+A+ E D+ + +G+++T
Sbjct: 82 EPERRAFTYLLLSGVRFAYASTARVLVVKFVSSMSASADVLALASAEFDVGGVAQGKTIT 141
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 142 VKWRGKPVFIRHR 154
>gi|402217910|gb|EJT97989.1| ubiquinol-cytochrome c reductase iron-sulfur subunit mitochondrial
precursor [Dacryopinax sp. DJM-731 SS1]
Length = 279
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 9/185 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PD+S Y K + + +AF+Y + G ++G AK+ V F+++M+ASADVLA+
Sbjct: 101 PDWSHY-------KTESPSMNRAFSYFMVGSMGLLGASAAKATVTDFLATMAASADVLAL 153
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV ++ IP ++V KWRGKP+FIRHRT EID ++ ++ LRDP+ D R K P
Sbjct: 154 AKVEVSMSAIPLAKNVIIKWRGKPVFIRHRTAAEIDDARHVDLKSLRDPETDEARTKRPE 213
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-- 187
WLV++G+CTHLGCVPI +GD+GG++CPCHGSHYD SGR RKGPAP N+E+PPY F D
Sbjct: 214 WLVMLGVCTHLGCVPIGESGDYGGWFCPCHGSHYDISGRARKGPAPLNLEIPPYDFNDAE 273
Query: 188 EGILI 192
E I+I
Sbjct: 274 EKIII 278
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PD+S Y K + + +AF+Y + G ++G AK+ V F+++M+ASADVLA+
Sbjct: 101 PDWSHY-------KTESPSMNRAFSYFMVGSMGLLGASAAKATVTDFLATMAASADVLAL 153
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV ++ IP ++V KWRGKP+FIRHR
Sbjct: 154 AKVEVSMSAIPLAKNVIIKWRGKPVFIRHR 183
>gi|392578551|gb|EIW71679.1| hypothetical protein TREMEDRAFT_43002 [Tremella mesenterica DSM
1558]
Length = 273
Score = 219 bits (559), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
Query: 1 MLAHSDIRT-PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
+ H D + PDFS YR K +Y + G V+ AKS V +S+
Sbjct: 85 LAEHPDTTSIPDFSPYR-------ASSPESNKTLSYFMVGSLGVLAASGAKSTVTDLLSN 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA+A IEV++ IPEG+++ KWRGKP+FIRHRT E++ + +I LRDPQ
Sbjct: 138 LSASADVLALAKIEVEMGAIPEGKNLIVKWRGKPVFIRHRTDDEVEEARAVDIKTLRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DR + P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E
Sbjct: 198 KDEDRTQRPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLE 257
Query: 180 VPPYQFGDE 188
+P Y F D+
Sbjct: 258 IPQYAFNDD 266
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 194 MLAHSDIRT-PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+ H D + PDFS YR K +Y + G V+ AKS V +S+
Sbjct: 85 LAEHPDTTSIPDFSPYR-------ASSPESNKTLSYFMVGSLGVLAASGAKSTVTDLLSN 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA+A IEV++ IPEG+++ KWRGKP+FIRHR
Sbjct: 138 LSASADVLALAKIEVEMGAIPEGKNLIVKWRGKPVFIRHR 177
>gi|299755397|ref|XP_001828634.2| ubiquinol-cytochrome c reductase iron-sulfur subunit [Coprinopsis
cinerea okayama7#130]
gi|298411208|gb|EAU93138.2| ubiquinol-cytochrome c reductase iron-sulfur subunit [Coprinopsis
cinerea okayama7#130]
Length = 276
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 132/179 (73%), Gaps = 8/179 (4%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
TPD+S YR NP+ +A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 98 TPDWSAYRT--NPENS------RALSYFMVGSMGVISASAAKSSVSEFLQTMAASADVLA 149
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
+A +EVDL IPEG++V KWRGKP+FIRHRTQ EI+ + + LRDP++D RVK P
Sbjct: 150 LAKVEVDLASIPEGKNVIIKWRGKPVFIRHRTQSEIEEARAIDWKSLRDPESDDARVKKP 209
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAPTN+EVP Y+ +
Sbjct: 210 EWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPTNLEVPQYELNE 268
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
TPD+S YR NP+ +A +Y + G V+ AKS V++F+ +M+ASADVLA
Sbjct: 98 TPDWSAYRT--NPENS------RALSYFMVGSMGVISASAAKSSVSEFLQTMAASADVLA 149
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A +EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 150 LAKVEVDLASIPEGKNVIIKWRGKPVFIRHR 180
>gi|443611699|gb|AGC96125.1| 1-aminocyclopropane-1-carboxylate synthase protein, partial
[Magnolia denudata]
Length = 207
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLAMA+
Sbjct: 28 YDEYNHERFP---PGDPSKRAFAYFVLTGGRFVYASLIRPLVLKFVLSMSASKDVLAMAS 84
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LRDPQ DS RVKDP WL
Sbjct: 85 LEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRDPQEDSVRVKDPEWL 144
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F DE L
Sbjct: 145 IVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLDESKL 204
Query: 192 I 192
+
Sbjct: 205 L 205
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLAMA+
Sbjct: 28 YDEYNHERFP---PGDPSKRAFAYFVLTGGRFVYASLIRPLVLKFVLSMSASKDVLAMAS 84
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 85 LEVDLSSIEPGSTVTVKWRGKPVFIRRR 112
>gi|1397233|gb|AAC49359.1| Rieske iron-sulfur protein [Schizosaccharomyces pombe]
Length = 228
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 130/183 (71%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS+Y+ D+ + +Y + G + A++ V+ F++S SASADVLAM
Sbjct: 51 PDFSEYQTKSTGDRS------RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAM 104
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
+ EVDL+ IPEG+++ KW+GKP+FIRHRT +EI + +IS LRDPQADSDRV+ P
Sbjct: 105 SKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPE 164
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+IG+CTHLGCVPI GD+GG++CPCHGSHYD SGRIR+GPAP N+ +P Y F
Sbjct: 165 WLVMIGVCTHLGCVPIGERGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTFEGSK 224
Query: 190 ILI 192
I+I
Sbjct: 225 III 227
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 188 EGILIRMLAHSDIRT-------PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMV 240
+G ++ + + IRT PDFS+Y+ D+ + +Y + G +
Sbjct: 29 KGSMMTIPKFTSIRTYTDSPEMPDFSEYQTKSTGDRS------RVISYAMVGTMGALTAA 82
Query: 241 CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A++ V+ F++S SASADVLAM+ EVDL+ IPEG+++ KW+GKP+FIRHR
Sbjct: 83 GAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHR 134
>gi|389742348|gb|EIM83535.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Stereum
hirsutum FP-91666 SS1]
Length = 278
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 129/186 (69%), Gaps = 9/186 (4%)
Query: 16 RRDRN--PD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
RRD N PD E+ +A +Y + G ++ AKS V +F+ +MSASADVLA+
Sbjct: 91 RRDANEVPDLQEYAAASESNNRALSYFMIGSMGIITASVAKSTVTEFLQTMSASADVLAL 150
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A +EV+L IPEG++V KWRGKP+FIRHRTQ EI ++ N RDP++D R K P
Sbjct: 151 AKVEVELASIPEGKNVIIKWRGKPVFIRHRTQDEIQEARSANWKTFRDPESDEARTKKPE 210
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYY--CPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WLV++G+CTHLGCVPI AGD+GG+Y CPCHGSHYD SGR RKGPAP N+EVP + F D
Sbjct: 211 WLVMLGVCTHLGCVPIGEAGDYGGWYVFCPCHGSHYDISGRARKGPAPLNLEVPEHDFND 270
Query: 188 -EGILI 192
EG L+
Sbjct: 271 AEGKLV 276
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 6/90 (6%)
Query: 209 RRDRN--PD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
RRD N PD E+ +A +Y + G ++ AKS V +F+ +MSASADVLA+
Sbjct: 91 RRDANEVPDLQEYAAASESNNRALSYFMIGSMGIITASVAKSTVTEFLQTMSASADVLAL 150
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EV+L IPEG++V KWRGKP+FIRHR
Sbjct: 151 AKVEVELASIPEGKNVIIKWRGKPVFIRHR 180
>gi|225451621|ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
[Vitis vinifera]
Length = 274
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 127/166 (76%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLAMA++EVDL+ I G +VT
Sbjct: 107 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASVEVDLSGIESGNTVT 166
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I + + +++ LRDPQ DS+RVK+P WL+++G+CTHLGC+P+
Sbjct: 167 IKWRGKPVFIRRRTEEDIKSANSVDLASLRDPQEDSERVKNPEWLIVVGVCTHLGCIPLP 226
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F DE L+
Sbjct: 227 NAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLDENKLL 272
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLAMA++EVDL+ I G +VT
Sbjct: 107 DPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASVEVDLSGIESGNTVT 166
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 167 IKWRGKPVFIRRR 179
>gi|384253112|gb|EIE26587.1| ubiquinol-cytochrome c r [Coccomyxa subellipsoidea C-169]
Length = 262
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 124/163 (76%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
++AFTY + G + + V +FI SMSAS DVLAMA++EVDL I GQ++T KW
Sbjct: 98 KRAFTYFVLTGGRFIYASALRLAVLKFILSMSASKDVLAMASLEVDLTKIEPGQTITVKW 157
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+FI+ RT+++ID N+ +LRDPQ DS+R ++P WLV++G+CTHLGCVP+ NAG
Sbjct: 158 RGKPVFIKRRTEEDIDLANQVNVKELRDPQTDSERTQNPEWLVLVGVCTHLGCVPLPNAG 217
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
D+ G++CPCHGSHYD SGR+RKGPAP N+EVP Y+F E +L+
Sbjct: 218 DYHGWFCPCHGSHYDGSGRVRKGPAPLNLEVPEYKFLSEEMLL 260
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
++AFTY + G + + V +FI SMSAS DVLAMA++EVDL I GQ++T KW
Sbjct: 98 KRAFTYFVLTGGRFIYASALRLAVLKFILSMSASKDVLAMASLEVDLTKIEPGQTITVKW 157
Query: 283 RGKPLFIRHR 292
RGKP+FI+ R
Sbjct: 158 RGKPVFIKRR 167
>gi|390604266|gb|EIN13657.1| ubiquinol-cytochrome c r [Punctularia strigosozonata HHB-11173 SS5]
Length = 159
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/157 (61%), Positives = 121/157 (77%), Gaps = 1/157 (0%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ GG V+ AKS V +F+ +M+ASADVLAMA +E+D+N IPEG++V KWRGKP+FI
Sbjct: 1 MVGGFGVLSASVAKSTVTEFLGTMAASADVLAMAKVELDINSIPEGKNVIIKWRGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRTQ EI+ ++ + LRDPQ D RVK P WLV++G+CTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTQDEIEEARSVDWKSLRDPQPDEARVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-EGILI 192
PCHGSHYD SGR RKGPAP N+EVP Y F D EG L+
Sbjct: 121 PCHGSHYDISGRARKGPAPLNLEVPEYSFNDAEGKLV 157
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 49/63 (77%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ GG V+ AKS V +F+ +M+ASADVLAMA +E+D+N IPEG++V KWRGKP+FI
Sbjct: 1 MVGGFGVLSASVAKSTVTEFLGTMAASADVLAMAKVELDINSIPEGKNVIIKWRGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|344243127|gb|EGV99230.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Cricetulus
griseus]
Length = 135
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 114/133 (85%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI E +SQLRDPQ
Sbjct: 1 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIAQEAAVEVSQLRDPQ 60
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR+GPAP N+E
Sbjct: 61 HDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRRGPAPLNLE 120
Query: 180 VPPYQFGDEGILI 192
VP Y+F + +++
Sbjct: 121 VPTYEFTSDDVVV 133
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 36/40 (90%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 1 MSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 40
>gi|149240443|ref|XP_001526097.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450220|gb|EDK44476.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Lodderomyces
elongisporus NRRL YB-4239]
Length = 158
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 121/156 (77%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G ++ AKS V F+SSM+ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSMAASADVLAMAKVEVKLGAIPEGKNVIVKWQGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRT +EI+ + ++S+LRDP+ D+ RVK P WLV++GICTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTAEEIEEANDVDVSKLRDPETDAQRVKKPEWLVMLGICTHLGCVPIGEAGDYGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD SGRIRKGPAP N+E+P Y F D+ L+
Sbjct: 121 PCHGSHYDISGRIRKGPAPLNLEIPQYDFTDDSTLM 156
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 46/63 (73%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G ++ AKS V F+SSM+ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSMAASADVLAMAKVEVKLGAIPEGKNVIVKWQGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|303278238|ref|XP_003058412.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459572|gb|EEH56867.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 241
Score = 217 bits (553), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 129/182 (70%), Gaps = 5/182 (2%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA 70
D S + D+ D ++AFTY + G +V + V +F+ SMSASADVLA+A
Sbjct: 63 DLSNHSVDKPGDP-----SKRAFTYFVLTGGRMVYASALRLTVLKFLLSMSASADVLALA 117
Query: 71 TIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSW 130
++EVD + I GQ+VT KWRGKP+FIR RT EI+ E ++ LRDPQ D +R DP W
Sbjct: 118 SLEVDTSKIESGQTVTVKWRGKPVFIRRRTPGEIEKEVAVDVGSLRDPQTDGERAADPEW 177
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGI 190
LV++G+CTHLGCVPI+NAGD+ G++CPCHGSHYDASGRIRKGPAP N+EVP Y+F +
Sbjct: 178 LVVVGVCTHLGCVPISNAGDYNGWFCPCHGSHYDASGRIRKGPAPYNLEVPEYKFTESDK 237
Query: 191 LI 192
++
Sbjct: 238 MV 239
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA 263
D S + D+ D ++AFTY + G +V + V +F+ SMSASADVLA+A
Sbjct: 63 DLSNHSVDKPGDP-----SKRAFTYFVLTGGRMVYASALRLTVLKFLLSMSASADVLALA 117
Query: 264 TIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++EVD + I GQ+VT KWRGKP+FIR R
Sbjct: 118 SLEVDTSKIESGQTVTVKWRGKPVFIRRR 146
>gi|308810957|ref|XP_003082787.1| Ubiquinol cytochrome c reductase, subunit RIP1 (ISS) [Ostreococcus
tauri]
gi|116061256|emb|CAL56644.1| Ubiquinol cytochrome c reductase, subunit RIP1 (ISS) [Ostreococcus
tauri]
Length = 238
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 126/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AFTY + G ++ + V +F+ SMSASADVLA+A++EVDL+ + G +VT
Sbjct: 71 DPDKRAFTYFVVSGGRMIYASALRLAVLKFLLSMSASADVLALASLEVDLSKVELGSTVT 130
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT EI E +++ LRDPQAD++R +P WLV +G+CTHLGCVPIA
Sbjct: 131 VKWRGKPVFIRRRTPAEIAREAAVDVASLRDPQADAERASNPEWLVAVGVCTHLGCVPIA 190
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+ G++CPCHGSHYDASGRIRKGPAP N+E+P Y+F ++ +I
Sbjct: 191 NAGDYNGWFCPCHGSHYDASGRIRKGPAPENLEIPAYKFLEDDKMI 236
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 51/73 (69%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AFTY + G ++ + V +F+ SMSASADVLA+A++EVDL+ + G +VT
Sbjct: 71 DPDKRAFTYFVVSGGRMIYASALRLAVLKFLLSMSASADVLALASLEVDLSKVELGSTVT 130
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 131 VKWRGKPVFIRRR 143
>gi|296815502|ref|XP_002848088.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Arthroderma
otae CBS 113480]
gi|238841113|gb|EEQ30775.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Arthroderma
otae CBS 113480]
Length = 271
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 132/216 (61%), Gaps = 34/216 (15%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV----------- 53
S + P F KY R E+ K F+Y + G ++ V AK+ V
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGTMGMMTAVGAKATVQGAFRLCVFLM 113
Query: 54 -----------------NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ F+ +MSASADVLA A +E+ LN IPEG++V KWRGKP+FI
Sbjct: 114 LAVNWGLRRYTDLAGLNSDFLLNMSASADVLAQAKVEIALNSIPEGKNVIIKWRGKPVFI 173
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRT EI Q T+ LRDPQ DSDRVK+P WLV++G+CTHLGCVPI AGD+GG++C
Sbjct: 174 RHRTASEIQEAQETSWESLRDPQPDSDRVKNPEWLVMLGVCTHLGCVPIGEAGDFGGWFC 233
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD SGRIRKGPAP N+EVP Y F + LI
Sbjct: 234 PCHGSHYDISGRIRKGPAPLNLEVPAYDFPTDDTLI 269
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 60/123 (48%), Gaps = 34/123 (27%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV----------- 246
S + P F KY R E+ K F+Y + G ++ V AK+ V
Sbjct: 60 STYKIPSFGKYASPR------RESTNKTFSYFVVGTMGMMTAVGAKATVQGAFRLCVFLM 113
Query: 247 -----------------NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ F+ +MSASADVLA A +E+ LN IPEG++V KWRGKP+FI
Sbjct: 114 LAVNWGLRRYTDLAGLNSDFLLNMSASADVLAQAKVEIALNSIPEGKNVIIKWRGKPVFI 173
Query: 290 RHR 292
RHR
Sbjct: 174 RHR 176
>gi|449550595|gb|EMD41559.1| hypothetical protein CERSUDRAFT_110112 [Ceriporiopsis subvermispora
B]
Length = 159
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 94/149 (63%), Positives = 117/149 (78%)
Query: 39 GGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 98
G ++ A+S V +F+ +MSASADVLAMA +EVD+N IPEG++V KWRGKP+FIRH
Sbjct: 3 GSMGIITASVAQSTVTEFLKTMSASADVLAMAKVEVDINTIPEGKNVIIKWRGKPVFIRH 62
Query: 99 RTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPC 158
RTQ EI ++T+ LRDPQ D DR K P WLV++G+CTHLGCVPI AGD+GG++CPC
Sbjct: 63 RTQDEIQEARSTDWKTLRDPQPDEDRAKKPDWLVMLGVCTHLGCVPIGEAGDFGGWFCPC 122
Query: 159 HGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
HGSHYD SGRIRKGPAPTN+EVP Y+ +
Sbjct: 123 HGSHYDISGRIRKGPAPTNLEVPQYEINE 151
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 232 GGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
G ++ A+S V +F+ +MSASADVLAMA +EVD+N IPEG++V KWRGKP+FIRH
Sbjct: 3 GSMGIITASVAQSTVTEFLKTMSASADVLAMAKVEVDINTIPEGKNVIIKWRGKPVFIRH 62
Query: 292 R 292
R
Sbjct: 63 R 63
>gi|126275479|ref|XP_001387090.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor (Rieske iron-sulfur protein) (RISP)
[Scheffersomyces stipitis CBS 6054]
gi|126212959|gb|EAZ63067.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor (Rieske iron-sulfur protein) (RISP)
[Scheffersomyces stipitis CBS 6054]
Length = 158
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 96/156 (61%), Positives = 118/156 (75%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G ++ AKS V F+SS++ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSIAASADVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRT EID +I LRDPQ D DRVK P WLV++GICTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTADEIDEANQVDIKTLRDPQNDIDRVKKPEWLVMLGICTHLGCVPIGEAGDFGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD SGRIR+GPAP N+E+P Y+F DE L+
Sbjct: 121 PCHGSHYDISGRIRRGPAPLNLEIPQYEFSDEETLL 156
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G ++ AKS V F+SS++ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSIAASADVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|170084801|ref|XP_001873624.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651176|gb|EDR15416.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 159
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/158 (60%), Positives = 123/158 (77%), Gaps = 2/158 (1%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G V+ AKS V++F+ +M+ASADVLA+A +EV+L IPEG++V KWRGKP+FI
Sbjct: 1 MVGSLGVLSASMAKSSVSEFLQTMAASADVLALAKVEVELGAIPEGKNVIIKWRGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRTQ EI+ ++++ RDPQ D DRVK P WLV++G+CTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTQAEIEEARSSDWKSFRDPQPDEDRVKKPEWLVMLGVCTHLGCVPIGEAGDFGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQF--GDEGILI 192
PCHGSHYD SGR RKGPAP N+EVP Y+F GDE ++I
Sbjct: 121 PCHGSHYDISGRARKGPAPLNLEVPAYEFTEGDEKVVI 158
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G V+ AKS V++F+ +M+ASADVLA+A +EV+L IPEG++V KWRGKP+FI
Sbjct: 1 MVGSLGVLSASMAKSSVSEFLQTMAASADVLALAKVEVELGAIPEGKNVIIKWRGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|115446391|ref|NP_001046975.1| Os02g0520800 [Oryza sativa Japonica Group]
gi|49388912|dbj|BAD26134.1| putative ubiquinol-cytochrome c reductase iron-sulfur subunit,
mitochondrial precursor [Oryza sativa Japonica Group]
gi|49389082|dbj|BAD26320.1| putative ubiquinol-cytochrome c reductase iron-sulfur subunit,
mitochondrial precursor [Oryza sativa Japonica Group]
gi|113536506|dbj|BAF08889.1| Os02g0520800 [Oryza sativa Japonica Group]
gi|125539673|gb|EAY86068.1| hypothetical protein OsI_07438 [Oryza sativa Indica Group]
gi|215735009|dbj|BAG95731.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 272
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 126/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 164
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I+ + +I LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 165 VKWRGKPVFIRRRTEEDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 224
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 225 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 270
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 164
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 165 VKWRGKPVFIRRR 177
>gi|357622638|gb|EHJ74064.1| ubiquinol-cytochrome c reductase [Danaus plexippus]
Length = 273
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 134/194 (69%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H DI+ P+F YR+++ +P K +Q + +TY++ + GM C K+ + F+ S
Sbjct: 78 HRDIKHPNFDAYRKEKFKDPSKTTWHSQDEKYGYTYVVGFFGLLGGMYCTKTELIHFLLS 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSA ADVLA+A+IE+D+ I G +++KWRGKPLF++HRT EI E T +S L DP+
Sbjct: 138 MSAPADVLALASIEIDIGNIAPGACLSYKWRGKPLFVKHRTVGEISAEAKTPLSLLIDPE 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTNM 178
R + P WL++IGICTHLGCVP+ N+GDW GG+YCPCHGSHYD GR RKGPAP N+
Sbjct: 198 TPEQRTQKPEWLIVIGICTHLGCVPVPNSGDWAGGFYCPCHGSHYDNVGRARKGPAPLNL 257
Query: 179 EVPPYQFGDEGILI 192
EVPPY F + +++
Sbjct: 258 EVPPYTFLSDTLVL 271
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H DI+ P+F YR+++ +P K +Q + +TY++ + GM C K+ + F+ S
Sbjct: 78 HRDIKHPNFDAYRKEKFKDPSKTTWHSQDEKYGYTYVVGFFGLLGGMYCTKTELIHFLLS 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSA ADVLA+A+IE+D+ I G +++KWRGKPLF++HR
Sbjct: 138 MSAPADVLALASIEIDIGNIAPGACLSYKWRGKPLFVKHR 177
>gi|405120742|gb|AFR95512.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Cryptococcus
neoformans var. grubii H99]
Length = 279
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSAYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A IEV++ IPEG+++ KWRGKP+FIRHRT EID N ++ LRDP+ D R + P
Sbjct: 154 AKIEVEMGSIPEGKNLIVKWRGKPVFIRHRTPDEIDEANNIDVKTLRDPETDEQRTQRPE 213
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y F D+
Sbjct: 214 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEYAFNDD 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSAYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A IEV++ IPEG+++ KWRGKP+FIRHR
Sbjct: 154 AKIEVEMGSIPEGKNLIVKWRGKPVFIRHR 183
>gi|58267540|ref|XP_570926.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134111963|ref|XP_775517.1| hypothetical protein CNBE2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258176|gb|EAL20870.1| hypothetical protein CNBE2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227160|gb|AAW43619.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 279
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 126/179 (70%), Gaps = 7/179 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSAYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A IEV++ IPEG+++ KWRGKP+FIRHRT EID N ++ LRDP+ D R + P
Sbjct: 154 AKIEVEMGSIPEGKNLIVKWRGKPVFIRHRTPDEIDEANNIDVKTLRDPETDEQRTQRPE 213
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E+P Y F D+
Sbjct: 214 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLEIPEYAFNDD 272
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSAYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A IEV++ IPEG+++ KWRGKP+FIRHR
Sbjct: 154 AKIEVEMGSIPEGKNLIVKWRGKPVFIRHR 183
>gi|449452028|ref|XP_004143762.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
mitochondrial-like [Cucumis sativus]
gi|449516924|ref|XP_004165496.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
mitochondrial-like [Cucumis sativus]
Length = 274
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 95 YDEYNHERFP---PGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALAS 151
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+++I + +I LRDPQ D +RVKDP WL
Sbjct: 152 LEVDLSSIEPGATVTVKWRGKPVFIRRRTEEDIKLANSVDIGTLRDPQQDGERVKDPEWL 211
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++ L
Sbjct: 212 VVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYTFLEDNKL 271
Query: 192 I 192
+
Sbjct: 272 L 272
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 95 YDEYNHERFP---PGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALAS 151
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 152 LEVDLSSIEPGATVTVKWRGKPVFIRRR 179
>gi|224075449|ref|XP_002304638.1| predicted protein [Populus trichocarpa]
gi|222842070|gb|EEE79617.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + +V +F+ SMSAS DVLAMA+
Sbjct: 93 YDEHNHERYP---PGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMAS 149
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LRDPQ D+ RVKDP WL
Sbjct: 150 LEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRDPQEDAARVKDPEWL 209
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 210 VVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 269
Query: 192 I 192
+
Sbjct: 270 L 270
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + +V +F+ SMSAS DVLAMA+
Sbjct: 93 YDEHNHERYP---PGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMAS 149
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 150 LEVDLSSIEPGSTVTVKWRGKPVFIRRR 177
>gi|1717951|sp|P51133.1|UCRI3_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-3,
mitochondrial; AltName: Full=Complex III subunit 5-3;
AltName: Full=Rieske iron-sulfur protein 3; Short=RISP3;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit 3; Flags: Precursor
gi|530053|gb|AAA20832.1| Rieske iron-sulfur protein [Nicotiana tabacum]
Length = 268
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 126/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I+ + ++ LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 161 VKWRGKPVFIRRR 173
>gi|104294991|gb|ABF72007.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
(Rieske iron-sulfur protein), putative [Musa acuminata]
Length = 225
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 46 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFVYASLLRLLILKFVLSMSASKDVLALAS 102
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++S LRDPQ DS RVK+P WL
Sbjct: 103 LEVDLSNIEPGNTVTVKWRGKPVFIRRRTESDIKMANSVDVSSLRDPQEDSARVKNPEWL 162
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 163 IVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPFNLEVPTYTFLEENKL 222
Query: 192 I 192
+
Sbjct: 223 L 223
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 46 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFVYASLLRLLILKFVLSMSASKDVLALAS 102
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 103 LEVDLSNIEPGNTVTVKWRGKPVFIRRR 130
>gi|222622965|gb|EEE57097.1| hypothetical protein OsJ_06940 [Oryza sativa Japonica Group]
Length = 416
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 126/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 249 DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 308
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I+ + +I LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 309 VKWRGKPVFIRRRTEEDINLANSVDIGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 368
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 369 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 414
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 174 APTNMEVPPYQFGDEGILIRM---------LAHSDIRTPDFSKYRRDRNPDKGQE-ETQR 223
+P PP+ F E ++ R S ++ P + N ++ Q + +
Sbjct: 193 SPAVPRPPPHGFSSETLVPRNQDVSLTELPATVSAVKNPSAKIVYDEYNHERYQPGDPSK 252
Query: 224 KAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWR 283
+AF Y + G + + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT KWR
Sbjct: 253 RAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWR 312
Query: 284 GKPLFIRHR 292
GKP+FIR R
Sbjct: 313 GKPVFIRRR 321
>gi|356498600|ref|XP_003518138.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
mitochondrial-like [Glycine max]
Length = 266
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 99 DPSKRAFAYFVLTGGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 158
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ D+DRVKDP WL++IG+CTHLGC+P+
Sbjct: 159 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLP 218
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 219 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLM 264
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 99 DPSKRAFAYFVLTGGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 158
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 159 VKWRGKPVFIRRR 171
>gi|68465495|ref|XP_723109.1| likely ubiquinol cytochrome-c reductase complex component [Candida
albicans SC5314]
gi|68465788|ref|XP_722962.1| likely ubiquinol cytochrome-c reductase complex component [Candida
albicans SC5314]
gi|46444970|gb|EAL04241.1| likely ubiquinol cytochrome-c reductase complex component [Candida
albicans SC5314]
gi|46445126|gb|EAL04396.1| likely ubiquinol cytochrome-c reductase complex component [Candida
albicans SC5314]
Length = 158
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 117/156 (75%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G ++ AKS V F+SS +ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSFAASADVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRT EI+ +I LRDPQ D+DRVK P WL+++GICTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTADEIEEANQVDIKTLRDPQNDADRVKKPEWLIMLGICTHLGCVPIGEAGDFGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD SGRIRKGPAP N+E+P Y F D+ L+
Sbjct: 121 PCHGSHYDISGRIRKGPAPLNLEIPEYDFTDDETLL 156
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G ++ AKS V F+SS +ASADVLAMA +EV L IPEG++V KW+GKP+FI
Sbjct: 1 MVGSMGLLSAAGAKSTVEAFLSSFAASADVLAMAKVEVKLGAIPEGKNVIIKWQGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|449452030|ref|XP_004143763.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
mitochondrial-like [Cucumis sativus]
gi|449516922|ref|XP_004165495.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
mitochondrial-like [Cucumis sativus]
Length = 274
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 124/174 (71%), Gaps = 3/174 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 95 YDDYNHERFP---PGDPSKRAFAYFVLSGGRFVYASLIRLLVLKFVLSMSASKDVLALAS 151
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +I LRDPQ D +RVKDP WL
Sbjct: 152 LEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQQDEERVKDPEWL 211
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 212 VVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSF 265
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 187 DEGILIRMLAH-SDIRTPD----FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVC 241
D+G+++ + A + ++ P + Y +R P + ++AF Y + G V
Sbjct: 72 DDGLILDIPATVAAVKNPSSKIVYDDYNHERFP---PGDPSKRAFAYFVLSGGRFVYASL 128
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ +V +F+ SMSAS DVLA+A++EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 129 IRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRR 179
>gi|359806775|ref|NP_001241047.1| uncharacterized protein LOC100798615 [Glycine max]
gi|255644394|gb|ACU22702.1| unknown [Glycine max]
Length = 265
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 157
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ D+DRVKDP WL++IG+CTHLGC+P+
Sbjct: 158 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLP 217
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 218 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLM 263
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 157
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 158 VKWRGKPVFIRRR 170
>gi|339234541|ref|XP_003378825.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
gi|316978578|gb|EFV61552.1| putative ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Trichinella spiralis]
Length = 1326
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 131/217 (60%), Gaps = 27/217 (12%)
Query: 3 AHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF +YRRD D + RK F+Y+ G + + C K+V Q IS
Sbjct: 962 AHTDVTFPDFDEYRRDSTKDIKLRNEDTDVPRKMFSYLSLGVGTAATLYCTKTVALQVIS 1021
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
A A E++LNL+PEG++ TF WRGKP+F+RHRT KEI+ E +IS+LRDP
Sbjct: 1022 YKGPPFSEEAGAVAEINLNLVPEGKNSTFLWRGKPVFVRHRTAKEINVESQVDISKLRDP 1081
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPI-----------------------ANAGDWGGYY 155
+ D RV+ P WL+++ CTHLGCVPI A AGD+ GY+
Sbjct: 1082 EHDHQRVQKPEWLIVLAPCTHLGCVPIRKLMMFFKIETCNILLHVYEIILAYAGDYKGYF 1141
Query: 156 CPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
CPCHGSHYDASGRIR+GPAP N+EVP Y F DE ++
Sbjct: 1142 CPCHGSHYDASGRIRRGPAPRNLEVPHYVFKDENTVL 1178
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF +YRRD D + RK F+Y+ G + + C K+V Q IS
Sbjct: 962 AHTDVTFPDFDEYRRDSTKDIKLRNEDTDVPRKMFSYLSLGVGTAATLYCTKTVALQVIS 1021
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A E++LNL+PEG++ TF WRGKP+F+RHR
Sbjct: 1022 YKGPPFSEEAGAVAEINLNLVPEGKNSTFLWRGKPVFVRHR 1062
>gi|388498708|gb|AFK37420.1| unknown [Lotus japonicus]
Length = 273
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 124/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AFTY + G V + +V +F+ SMSAS DVLA+A++EVDL+ I G VT
Sbjct: 106 DPSKRAFTYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTIVT 165
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ DS+RVK+P WL++IG+CTHLGC+P+
Sbjct: 166 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQQDSERVKNPEWLIVIGVCTHLGCIPLP 225
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 226 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLM 271
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AFTY + G V + +V +F+ SMSAS DVLA+A++EVDL+ I G VT
Sbjct: 106 DPSKRAFTYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTIVT 165
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 166 VKWRGKPVFIRRR 178
>gi|6102770|emb|CAB59195.1| ubiquinol-cytochrome C reductase iron-sulfur subunit precursor
[Cyanophora paradoxa]
Length = 225
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/198 (49%), Positives = 140/198 (70%), Gaps = 8/198 (4%)
Query: 3 AHSDIRTPDFSK------YRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 55
A + + TP +S+ Y++++ ++ + R+ F Y++ G + M + V +
Sbjct: 27 ATNAVATPAYSELSSVPLYQQEKKIERFTPGDENRRPFAYLVIGSARFAYMAWTRVAVLK 86
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
IS+MSASADVLA+A++EVD++ IP GQ+VT KWRGKP+FIRHRT EI NIS+L
Sbjct: 87 VISTMSASADVLALASVEVDVSSIPVGQNVTIKWRGKPVFIRHRTAAEIAEAGAVNISEL 146
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
R + D+ R + P++L+++G+CTHLGCVP+ NAGD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 147 RHQETDAQRAQKPNFLIMLGVCTHLGCVPLGNAGDYNGWFCPCHGSHYDISGRIRKGPAP 206
Query: 176 TNMEVPPYQF-GDEGILI 192
N+EVPPY+F D +LI
Sbjct: 207 LNLEVPPYKFTSDSTVLI 224
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 71/111 (63%), Gaps = 7/111 (6%)
Query: 189 GILIRMLAHSDIRTPDFSK------YRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVC 241
+L R A + + TP +S+ Y++++ ++ + R+ F Y++ G + M
Sbjct: 20 ALLARPHATNAVATPAYSELSSVPLYQQEKKIERFTPGDENRRPFAYLVIGSARFAYMAW 79
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ V + IS+MSASADVLA+A++EVD++ IP GQ+VT KWRGKP+FIRHR
Sbjct: 80 TRVAVLKVISTMSASADVLALASVEVDVSSIPVGQNVTIKWRGKPVFIRHR 130
>gi|1717953|sp|P51135.1|UCRI5_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-5,
mitochondrial; AltName: Full=Complex III subunit 5-5;
AltName: Full=Rieske iron-sulfur protein 5; Short=RISP5;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit 5; Flags: Precursor
gi|530055|gb|AAA20834.1| Rieske iron-sulfur protein [Nicotiana tabacum]
Length = 268
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 125/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT ++I+ + ++ LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 161 VKWRGKPVFIRRR 173
>gi|168001898|ref|XP_001753651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695058|gb|EDQ81403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 126/163 (77%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
+KAFTY++ G + + + + I SMSAS DVLAMA++EVD++ I G +VT KW
Sbjct: 32 KKAFTYLVLTGGRFIYASALRILALKLILSMSASRDVLAMASLEVDISSIEPGSTVTVKW 91
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+F+RHRT+ +I +T +++LRDP+ DS RV++P WLV++G+CTHLGCVP+ NAG
Sbjct: 92 RGKPVFVRHRTEADIKLANSTPMNELRDPEEDSVRVQNPEWLVVVGVCTHLGCVPLPNAG 151
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
D+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y+F +E L+
Sbjct: 152 DYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPQYKFTEETKLL 194
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 49/70 (70%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
+KAFTY++ G + + + + I SMSAS DVLAMA++EVD++ I G +VT KW
Sbjct: 32 KKAFTYLVLTGGRFIYASALRILALKLILSMSASRDVLAMASLEVDISSIEPGSTVTVKW 91
Query: 283 RGKPLFIRHR 292
RGKP+F+RHR
Sbjct: 92 RGKPVFVRHR 101
>gi|358248526|ref|NP_001239641.1| uncharacterized protein LOC100806917 [Glycine max]
gi|255642305|gb|ACU21417.1| unknown [Glycine max]
Length = 264
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 97 DPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 156
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ D+DRVKDP WL++IG+CTHLGC+P+
Sbjct: 157 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQLDADRVKDPEWLIVIGVCTHLGCIPLP 216
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 217 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLM 262
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 97 DPSKRAFAYFVLTGGRFAYASLVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 156
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 157 VKWRGKPVFIRRR 169
>gi|145353439|ref|XP_001421020.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357337|ref|XP_001422876.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581256|gb|ABO99313.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583120|gb|ABP01235.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 190
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 127/171 (74%), Gaps = 7/171 (4%)
Query: 17 RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 76
R +PDK +AFTY + G ++ + V +F+ SMSA+ADVLA+A++EVDL
Sbjct: 20 RAGDPDK-------RAFTYFVMTGGRMIYASALRLAVLKFLLSMSATADVLALASLEVDL 72
Query: 77 NLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGI 136
+ + G +VT KWRGKP+FIR RT EI E++ +++ LRDPQADS+R + WLV +G+
Sbjct: 73 SKVELGSTVTVKWRGKPVFIRRRTPAEIAKEESVDVASLRDPQADSERAPNQEWLVAVGV 132
Query: 137 CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
CTHLGCVPIANAGD+ G++CPCHGSHYDASGRIRKGPAP N+E+P Y+F D
Sbjct: 133 CTHLGCVPIANAGDYNGWFCPCHGSHYDASGRIRKGPAPENLEIPEYKFLD 183
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 7/83 (8%)
Query: 210 RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 269
R +PDK +AFTY + G ++ + V +F+ SMSA+ADVLA+A++EVDL
Sbjct: 20 RAGDPDK-------RAFTYFVMTGGRMIYASALRLAVLKFLLSMSATADVLALASLEVDL 72
Query: 270 NLIPEGQSVTFKWRGKPLFIRHR 292
+ + G +VT KWRGKP+FIR R
Sbjct: 73 SKVELGSTVTVKWRGKPVFIRRR 95
>gi|255543531|ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Ricinus communis]
gi|223547839|gb|EEF49331.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Ricinus communis]
Length = 280
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + ++ + + SMSAS DVLA+A+
Sbjct: 101 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFVYASLIRLLILKLVLSMSASKDVLALAS 157
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ D+DRVK+P WL
Sbjct: 158 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVELASLRDPQPDADRVKNPEWL 217
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F DE L
Sbjct: 218 IVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLDENKL 277
Query: 192 I 192
+
Sbjct: 278 L 278
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + ++ + + SMSAS DVLA+A+
Sbjct: 101 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFVYASLIRLLILKLVLSMSASKDVLALAS 157
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 158 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 185
>gi|328768119|gb|EGF78166.1| hypothetical protein BATDEDRAFT_30541 [Batrachochytrium
dendrobatidis JAM81]
Length = 158
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 122/156 (78%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G S +G + AK++V ++ ++SASADVLA+A +E++L IPEG++V KWRGKP+F+
Sbjct: 1 MVGNLSAIGAMSAKNIVTDYLLNLSASADVLALAKVEINLAAIPEGKNVVLKWRGKPVFV 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRT +EI N+ +LRD +AD+DR + P WLV++G+CTHLGCVP+ AG++GG++C
Sbjct: 61 RHRTAQEIAEANTVNLDELRDREADADRTQKPEWLVMLGVCTHLGCVPLGEAGEYGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD SGRIRKGPAP NME+PPY+ D+ L+
Sbjct: 121 PCHGSHYDISGRIRKGPAPLNMEIPPYEIKDDDKLV 156
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G S +G + AK++V ++ ++SASADVLA+A +E++L IPEG++V KWRGKP+F+
Sbjct: 1 MVGNLSAIGAMSAKNIVTDYLLNLSASADVLALAKVEINLAAIPEGKNVVLKWRGKPVFV 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|224053573|ref|XP_002297879.1| predicted protein [Populus trichocarpa]
gi|222845137|gb|EEE82684.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 124/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + +V +F+ SMSAS DVLAMA++EVDL+ I G +VT
Sbjct: 108 DPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVT 167
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + +++ LRDPQ D+ RVK+P WLV++G+CTHLGC+P+
Sbjct: 168 VKWRGKPVFIRRRTEDDIKLANSVDLASLRDPQEDAARVKNPEWLVVVGVCTHLGCIPLP 227
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 228 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 273
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + +V +F+ SMSAS DVLAMA++EVDL+ I G +VT
Sbjct: 108 DPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVT 167
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 168 VKWRGKPVFIRRR 180
>gi|1717950|sp|P51132.1|UCRI2_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-2,
mitochondrial; AltName: Full=Complex III subunit 5-2;
AltName: Full=Rieske iron-sulfur protein 2; Short=RISP2;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit 2; Flags: Precursor
gi|530052|gb|AAA20831.1| Rieske iron-sulfur protein [Nicotiana tabacum]
Length = 272
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 93 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 149
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I+ + ++ LRDPQ D++RVK P WL
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWL 209
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 210 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 269
Query: 192 I 192
+
Sbjct: 270 L 270
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 93 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 149
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 177
>gi|328870656|gb|EGG19029.1| ubiquinol-cytochrome-c reductase subunit [Dictyostelium
fasciculatum]
Length = 219
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 127/176 (72%), Gaps = 4/176 (2%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
P+F KYR+ + + + + +TY++ G ++ AK+ V +S+M+ D+LA+
Sbjct: 37 PNFDKYRKHSS----AADPEGRGYTYLVVGAAASGLAAMAKNTVVSALSTMAPGQDILAL 92
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
++IE+DL+ IPE +VT KWRGKPLFIRHR+ EI Q ++S L DPQAD R KDP
Sbjct: 93 SSIEIDLSSIPEATAVTLKWRGKPLFIRHRSADEISQSQAVDVSTLVDPQADVKRAKDPE 152
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
W+V+IG+CTHLGC+PIA GD+GG+YCPCHGSHYD +GRIRKGPAP N+ +PPY+F
Sbjct: 153 WIVLIGVCTHLGCIPIAGGGDFGGWYCPCHGSHYDNAGRIRKGPAPENLIIPPYKF 208
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
P+F KYR+ + + + + +TY++ G ++ AK+ V +S+M+ D+LA+
Sbjct: 37 PNFDKYRKHSS----AADPEGRGYTYLVVGAAASGLAAMAKNTVVSALSTMAPGQDILAL 92
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++IE+DL+ IPE +VT KWRGKPLFIRHR
Sbjct: 93 SSIEIDLSSIPEATAVTLKWRGKPLFIRHR 122
>gi|357508447|ref|XP_003624512.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago
truncatula]
gi|355499527|gb|AES80730.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Medicago
truncatula]
Length = 273
Score = 213 bits (542), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 128/181 (70%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + +V +F+ SMSAS DVLAMA+
Sbjct: 94 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT ++ + ++ LRDPQ DS+RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVKLANSVDVGSLRDPQQDSERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + +V +F+ SMSAS DVLAMA+
Sbjct: 94 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>gi|7543910|emb|CAB87150.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
Length = 240
Score = 213 bits (542), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 52 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 111
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 112 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 171
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WLV++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 172 KNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 231
Query: 186 GDEGILI 192
+E L+
Sbjct: 232 LEENKLL 238
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 52 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 111
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 112 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 145
>gi|225425274|ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
[Vitis vinifera]
gi|296085532|emb|CBI29264.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A+IEVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPGSTVT 164
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ D+ RVKDP WL++IG+CTHLGC+P+
Sbjct: 165 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVIGVCTHLGCIPLP 224
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 225 NAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLEVPTYSFLEENKLM 270
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A+IEVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPGSTVT 164
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 165 VKWRGKPVFIRRR 177
>gi|324514690|gb|ADY45953.1| Cytochrome b-c1 complex subunit Rieske [Ascaris suum]
Length = 314
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 131/196 (66%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGG-SSVVGMVCAKSVVNQF 56
AH+D+ PDF KYR + D + E +R+A + G V+ ++ AK V
Sbjct: 116 FAHTDVSFPDFDKYRLENTLDVVTSARETENERRALPIAVYYGVGGVMSLLVAKEAVQTM 175
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
+S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HRT +EI E+ +S LR
Sbjct: 176 VSFKAMAADQKALASIEINMSDIPEGQTKTFEWRGKPVFVKHRTPEEISREKAVVVSDLR 235
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D +RV W V+IG+CTHLGCVPI AGD+ GYYCPCHGSHYD SGRIRKGPAP
Sbjct: 236 HPQHDDERVIRDEWSVVIGVCTHLGCVPIVGAGDYFGYYCPCHGSHYDGSGRIRKGPAPL 295
Query: 177 NMEVPPYQFGDEGILI 192
N+ VP Y F + I+I
Sbjct: 296 NLHVPAYNFKENSIVI 311
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 190 ILIRMLAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGG-SSVVGMVCAKS 244
+ R AH+D+ PDF KYR + D + E +R+A + G V+ ++ AK
Sbjct: 111 VTTRRFAHTDVSFPDFDKYRLENTLDVVTSARETENERRALPIAVYYGVGGVMSLLVAKE 170
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V +S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HR
Sbjct: 171 AVQTMVSFKAMAADQKALASIEINMSDIPEGQTKTFEWRGKPVFVKHR 218
>gi|18417067|ref|NP_568288.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis
thaliana]
gi|14030645|gb|AAK52997.1|AF375413_1 AT5g13430/T22N19_80 [Arabidopsis thaliana]
gi|17978905|gb|AAL47422.1| AT5g13430/T22N19_80 [Arabidopsis thaliana]
gi|332004510|gb|AED91893.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis
thaliana]
Length = 272
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 84 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 143
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 144 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 203
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WLV++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 204 KNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 263
Query: 186 GDEGILI 192
+E L+
Sbjct: 264 LEENKLL 270
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 84 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 143
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 144 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 177
>gi|324515394|gb|ADY46188.1| Cytochrome b-c1 complex subunit Rieske [Ascaris suum]
Length = 279
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 131/196 (66%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGG-SSVVGMVCAKSVVNQF 56
AH+D+ PDF KYR + D + E +R+A + G V+ ++ AK V
Sbjct: 81 FAHTDVSFPDFDKYRLENTLDVVTSARETENERRALPIAVYYGVGGVMSLLVAKEAVQTM 140
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
+S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HRT +EI E+ +S LR
Sbjct: 141 VSFKAMAADQKALASIEINMSDIPEGQTKTFEWRGKPVFVKHRTPEEISREKAVVVSDLR 200
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
PQ D +RV W V+IG+CTHLGCVPI AGD+ GYYCPCHGSHYD SGRIRKGPAP
Sbjct: 201 HPQHDDERVIRDEWSVVIGVCTHLGCVPIVGAGDYFGYYCPCHGSHYDGSGRIRKGPAPL 260
Query: 177 NMEVPPYQFGDEGILI 192
N+ VP Y F + I+I
Sbjct: 261 NLHVPAYNFKENSIVI 276
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 190 ILIRMLAHSDIRTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGG-SSVVGMVCAKS 244
+ R AH+D+ PDF KYR + D + E +R+A + G V+ ++ AK
Sbjct: 76 VTTRRFAHTDVSFPDFDKYRLENTLDVVTSARETENERRALPIAVYYGVGGVMSLLVAKE 135
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V +S + +AD A+A+IE++++ IPEGQ+ TF+WRGKP+F++HR
Sbjct: 136 AVQTMVSFKAMAADQKALASIEINMSDIPEGQTKTFEWRGKPVFVKHR 183
>gi|297811457|ref|XP_002873612.1| hypothetical protein ARALYDRAFT_909296 [Arabidopsis lyrata subsp.
lyrata]
gi|297319449|gb|EFH49871.1| hypothetical protein ARALYDRAFT_909296 [Arabidopsis lyrata subsp.
lyrata]
Length = 272
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 131/190 (68%), Gaps = 7/190 (3%)
Query: 7 IRTPD----FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
++TP+ + + +R P + ++AF Y + G V + +V + + SMSA
Sbjct: 84 VKTPNSKIVYDNHNHERYPPG---DPSKRAFAYFVLSGGRFVYASVIRLLVLKLVVSMSA 140
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
S DVLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + +I LRDPQ DS
Sbjct: 141 SKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDIGSLRDPQEDS 200
Query: 123 DRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
RVK+P WLV++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP
Sbjct: 201 VRVKNPEWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPT 260
Query: 183 YQFGDEGILI 192
Y F +E L+
Sbjct: 261 YSFLEENKLL 270
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 200 IRTPD----FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
++TP+ + + +R P + ++AF Y + G V + +V + + SMSA
Sbjct: 84 VKTPNSKIVYDNHNHERYPPG---DPSKRAFAYFVLSGGRFVYASVIRLLVLKLVVSMSA 140
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S DVLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 141 SKDVLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 177
>gi|21554278|gb|AAM63353.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
Length = 274
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 145
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 205
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WL+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 206 KNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 265
Query: 186 GDEGILI 192
+E L+
Sbjct: 266 LEENKLL 272
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 145
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 179
>gi|1717949|sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-1,
mitochondrial; AltName: Full=Complex III subunit 5-1;
AltName: Full=Rieske iron-sulfur protein 1; Short=RISP1;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit 1; Flags: Precursor
gi|170322|gb|AAA34112.1| Rieske Fe-S protein, partial [Nicotiana tabacum]
Length = 258
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 79 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALAS 135
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ D++RVK+P WL
Sbjct: 136 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWL 195
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 196 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 255
Query: 192 I 192
+
Sbjct: 256 L 256
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 79 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALAS 135
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 136 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 163
>gi|212723156|ref|NP_001131160.1| uncharacterized protein LOC100192468 [Zea mays]
gi|194688502|gb|ACF78335.1| unknown [Zea mays]
gi|194690744|gb|ACF79456.1| unknown [Zea mays]
gi|194707918|gb|ACF88043.1| unknown [Zea mays]
gi|195627274|gb|ACG35467.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Zea mays]
gi|195628664|gb|ACG36162.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Zea mays]
gi|413937039|gb|AFW71590.1| hypothetical protein ZEAMMB73_776977 [Zea mays]
Length = 272
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 93 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 149
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LR P+ D++RVK+P WL
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWL 209
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 210 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 269
Query: 192 I 192
+
Sbjct: 270 L 270
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 93 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 149
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 177
>gi|21553507|gb|AAM62600.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
Length = 272
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 84 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 143
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 144 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 203
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WL+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 204 KNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 263
Query: 186 GDEGILI 192
+E L+
Sbjct: 264 LEENKLL 270
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 84 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 143
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 144 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 177
>gi|15240627|ref|NP_196848.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis
thaliana]
gi|13899077|gb|AAK48960.1|AF370533_1 ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
gi|7543911|emb|CAB87151.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
gi|20148363|gb|AAM10072.1| ubiquinol--cytochrome-c reductase-like protein [Arabidopsis
thaliana]
gi|332004511|gb|AED91894.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Arabidopsis
thaliana]
Length = 274
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 145
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 205
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WL+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 206 KNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 265
Query: 186 GDEGILI 192
+E L+
Sbjct: 266 LEENKLL 272
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + I SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKD 145
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 179
>gi|297811459|ref|XP_002873613.1| hypothetical protein ARALYDRAFT_488163 [Arabidopsis lyrata subsp.
lyrata]
gi|297319450|gb|EFH49872.1| hypothetical protein ARALYDRAFT_488163 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/187 (50%), Positives = 130/187 (69%), Gaps = 1/187 (0%)
Query: 7 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
++TP+ D N ++ + ++AF Y + G V + +V + + SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVIRLLVLKLVVSMSASKD 145
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A++EVDL I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ DS RV
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRV 205
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K+P WL+++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F
Sbjct: 206 KNPEWLIVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSF 265
Query: 186 GDEGILI 192
+E L+
Sbjct: 266 LEENKLL 272
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 200 IRTPDFSKYRRDRNPDKGQE-ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
++TP+ D N ++ + ++AF Y + G V + +V + + SMSAS D
Sbjct: 86 VKTPNSKIVYDDHNHERYPPGDPSKRAFAYFVLSGGRFVYASVIRLLVLKLVVSMSASKD 145
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A++EVDL I G +VT KWRGKP+FIR R
Sbjct: 146 VLALASLEVDLGSIEPGTTVTVKWRGKPVFIRRR 179
>gi|255647066|gb|ACU24001.1| unknown [Glycine max]
Length = 266
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 122/166 (73%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 99 DPSKRAFAYFVLTGGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 158
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ D+DRVKDP WL++IG+CTHLGC+P+
Sbjct: 159 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLP 218
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD GRIRKGPAP N+EVP Y F +E L+
Sbjct: 219 NAGDFGGWFCPCHGSHYDIFGRIRKGPAPYNLEVPTYPFLEENKLM 264
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + +V +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 99 DPSKRAFAYFVLTGGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 158
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 159 VKWRGKPVFIRRR 171
>gi|357163143|ref|XP_003579637.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Brachypodium distachyon]
Length = 272
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 93 YDQYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 149
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT +I + +++ LR PQ D++RVK+P WL
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDIKLANSVDVASLRHPQQDAERVKNPEWL 209
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ N+GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 210 VVIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 269
Query: 192 I 192
+
Sbjct: 270 L 270
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 93 YDQYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 149
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 177
>gi|162458481|ref|NP_001105561.1| cytochrome b-c1 complex subunit Rieske, mitochondrial precursor
[Zea mays]
gi|1717957|sp|P49727.1|UCRI_MAIZE RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|168607|gb|AAA33507.1| Rieske Fe-S protein [Zea mays]
Length = 273
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LR P+ D++RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>gi|357149217|ref|XP_003575039.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Brachypodium distachyon]
Length = 269
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 90 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 146
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ ++ + +++ LRDPQ D+ RVK+P WL
Sbjct: 147 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEADVKLANSVDVASLRDPQEDAVRVKNPEWL 206
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ N+GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E +
Sbjct: 207 VVIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKM 266
Query: 192 I 192
+
Sbjct: 267 L 267
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 90 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 146
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 147 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 174
>gi|1717952|sp|P51134.1|UCRI4_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-4,
mitochondrial; AltName: Full=Complex III subunit 5-4;
AltName: Full=Rieske iron-sulfur protein 4; Short=RISP4;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit 4; Flags: Precursor
gi|530054|gb|AAA20833.1| Rieske iron-sulfur protein [Nicotiana tabacum]
Length = 236
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 57 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 113
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I+ + ++ LRDPQ D++RVK P WL
Sbjct: 114 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWL 173
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 174 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 233
Query: 192 I 192
+
Sbjct: 234 L 234
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 57 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 113
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 114 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 141
>gi|194691146|gb|ACF79657.1| unknown [Zea mays]
gi|413918191|gb|AFW58123.1| cytochrome b-c1 complex subunit Rieske, Precursor(Rieske
iron-sulfur protein) [Zea mays]
Length = 273
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LR P+ D++RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>gi|242072852|ref|XP_002446362.1| hypothetical protein SORBIDRAFT_06g014720 [Sorghum bicolor]
gi|241937545|gb|EES10690.1| hypothetical protein SORBIDRAFT_06g014720 [Sorghum bicolor]
Length = 270
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 91 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 147
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LR P+ D++RVK+P WL
Sbjct: 148 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWL 207
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 208 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 267
Query: 192 I 192
+
Sbjct: 268 L 268
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 91 YDEYNHERYPPG---DPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 147
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 148 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 175
>gi|168016554|ref|XP_001760814.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688174|gb|EDQ74553.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 223
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 125/163 (76%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
+KAF Y+I G + + + + I SMSAS DVLA+A++EVD++ I G +VT KW
Sbjct: 59 KKAFAYLILTGGRFIYASALRILALKLILSMSASRDVLALASLEVDISSIEPGSTVTVKW 118
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+F+RHRT+ +I +T +++LRDP+ DS RV++P WLV++G+CTHLGCVP+ NAG
Sbjct: 119 RGKPVFVRHRTEADIKLANSTPLNELRDPEEDSVRVQNPEWLVVVGVCTHLGCVPLPNAG 178
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
D+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y+F +E L+
Sbjct: 179 DYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPQYKFTEETKLL 221
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 48/70 (68%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
+KAF Y+I G + + + + I SMSAS DVLA+A++EVD++ I G +VT KW
Sbjct: 59 KKAFAYLILTGGRFIYASALRILALKLILSMSASRDVLALASLEVDISSIEPGSTVTVKW 118
Query: 283 RGKPLFIRHR 292
RGKP+F+RHR
Sbjct: 119 RGKPVFVRHR 128
>gi|308451611|ref|XP_003088736.1| hypothetical protein CRE_15107 [Caenorhabditis remanei]
gi|308245574|gb|EFO89526.1| hypothetical protein CRE_15107 [Caenorhabditis remanei]
Length = 189
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 128/186 (68%), Gaps = 5/186 (2%)
Query: 12 FSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 66
+ YRRD + P + E+ +R + + G V+ + K VV +S + +AD
Sbjct: 1 MTSYRRDSTKNTQTPARDTEDQRRALPSALYYGAGGVLSLWAGKEVVQTLVSYKAMAADQ 60
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK 126
A+A+IE+ ++ IPEGQ+ TF+WRGKP+F++HRT+ EI E+ ++ LR PQ D +RV+
Sbjct: 61 RALASIEISMSDIPEGQTKTFEWRGKPVFVKHRTKAEIAKEKAVPVADLRHPQHDDERVQ 120
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
W V+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+ VP Y F
Sbjct: 121 KDEWSVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLHVPAYSFK 180
Query: 187 DEGILI 192
D I+I
Sbjct: 181 DTTIVI 186
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 205 FSKYRRD-----RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 259
+ YRRD + P + E+ +R + + G V+ + K VV +S + +AD
Sbjct: 1 MTSYRRDSTKNTQTPARDTEDQRRALPSALYYGAGGVLSLWAGKEVVQTLVSYKAMAADQ 60
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+A+IE+ ++ IPEGQ+ TF+WRGKP+F++HR
Sbjct: 61 RALASIEISMSDIPEGQTKTFEWRGKPVFVKHR 93
>gi|77416965|gb|ABA81878.1| rieske iron-sulfur protein-like [Solanum tuberosum]
Length = 265
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASLLRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT +I + ++ LRDPQ D++RVK+P WLV++G+CTHLGC+P+
Sbjct: 158 VKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLP 217
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 218 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 263
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASLLRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 158 VKWRGKPVFIRRR 170
>gi|388516897|gb|AFK46510.1| unknown [Medicago truncatula]
Length = 273
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 127/181 (70%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + +V +F+ SMSAS DVLAMA+
Sbjct: 94 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT ++ + ++ LRDPQ D +RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDVKLANSVDVGSLRDPQQDFERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + +V +F+ SMSAS DVLAMA+
Sbjct: 94 YDEYNHERFPPG---DPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>gi|586145|sp|P37841.1|UCRI_SOLTU RecName: Full=Cytochrome b-c1 complex subunit Rieske,
mitochondrial; AltName: Full=Complex III subunit 5;
AltName: Full=Rieske iron-sulfur protein; Short=RISP;
AltName: Full=Ubiquinol-cytochrome c reductase
iron-sulfur subunit; Flags: Precursor
gi|488848|emb|CAA55894.1| Rieske iron sulphur protein [Solanum tuberosum]
Length = 265
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT +I + ++ LRDPQ D++RVK+P WLV++G+CTHLGC+P+
Sbjct: 158 VKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLP 217
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 218 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 263
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 158 VKWRGKPVFIRRR 170
>gi|115458144|ref|NP_001052672.1| Os04g0398500 [Oryza sativa Japonica Group]
gi|38347166|emb|CAE05156.2| OSJNBa0039C07.12 [Oryza sativa Japonica Group]
gi|113564243|dbj|BAF14586.1| Os04g0398500 [Oryza sativa Japonica Group]
gi|116309464|emb|CAH66535.1| H0209H04.2 [Oryza sativa Indica Group]
gi|125548128|gb|EAY93950.1| hypothetical protein OsI_15723 [Oryza sativa Indica Group]
gi|215765320|dbj|BAG87017.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 278
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R+ + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 99 YDEYNHERH---APGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 155
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++ LR PQ D++RVK+P WL
Sbjct: 156 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIALANSVDVGSLRHPQQDAERVKNPEWL 215
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 216 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 275
Query: 192 I 192
+
Sbjct: 276 L 276
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R+ + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 99 YDEYNHERH---APGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 155
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 156 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 183
>gi|255543220|ref|XP_002512673.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Ricinus communis]
gi|223548634|gb|EEF50125.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Ricinus communis]
Length = 264
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 125/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + +V + + SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 97 DPSKRAFAYFVLTGGRFVYASLIRLLVLKLVLSMSASKDVLALASLEVDLSSIEPGTTVT 156
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I+ + +++ LRDPQ D+ RVK+P WLV+IG+CTHLGC+P+
Sbjct: 157 VKWRGKPVFIRRRTEEDINLANSVDVASLRDPQEDATRVKNPEWLVVIGVCTHLGCIPLP 216
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++ L+
Sbjct: 217 NAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEDNKLL 262
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + +V + + SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 97 DPSKRAFAYFVLTGGRFVYASLIRLLVLKLVLSMSASKDVLALASLEVDLSSIEPGTTVT 156
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 157 VKWRGKPVFIRRR 169
>gi|212723608|ref|NP_001131229.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Zea mays]
gi|194690934|gb|ACF79551.1| unknown [Zea mays]
gi|194701342|gb|ACF84755.1| unknown [Zea mays]
gi|414587473|tpg|DAA38044.1| TPA: ubiquinol-cytochrome c reductase iron-sulfur subunit [Zea
mays]
Length = 273
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT +I + +++ LR P+ D++RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDIKLANSVDVASLRHPEQDAERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>gi|125590242|gb|EAZ30592.1| hypothetical protein OsJ_14641 [Oryza sativa Japonica Group]
Length = 218
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R+ + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 39 YDEYNHERH---APGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 95
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++ LR PQ D++RVK+P WL
Sbjct: 96 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIALANSVDVGSLRHPQQDAERVKNPEWL 155
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 156 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 215
Query: 192 I 192
+
Sbjct: 216 L 216
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R+ + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 39 YDEYNHERH---APGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 95
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 96 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 123
>gi|324517031|gb|ADY46707.1| Cytochrome b-c1 complex subunit Rieske [Ascaris suum]
Length = 245
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 133/195 (68%), Gaps = 6/195 (3%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGG-SSVVGMVCAKSVVNQFIS 58
H+D++ P F +RR D N + E R+A + I G V+ ++ AK + ++
Sbjct: 47 HTDVKFPHFEDFRRRSTLDINKAARESEDHRRALPHAIYYGVGGVMTLLTAKESIQALVA 106
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+AD A+A+IEV + IPEGQ+ TF+W+GKP+F++HRT +EI E+ +S+LR P
Sbjct: 107 FKGMAADQKALASIEVKMEEIPEGQTKTFEWQGKPVFVKHRTAREIQREREVVVSELRHP 166
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
Q D +RV+ P W V+IG+CTHLGCVPI AGD+ GGY+CPCHG+H+D SGRIRKGPAP N
Sbjct: 167 QTDEERVQKPEWSVLIGVCTHLGCVPIPGAGDFPGGYFCPCHGTHFDGSGRIRKGPAPLN 226
Query: 178 MEVPPYQFGDEGILI 192
+ +PPY F D+ I+I
Sbjct: 227 LNIPPYTFKDDTIVI 241
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 191 LIRMLAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGG-SSVVGMVCAKSV 245
+ R H+D++ P F +RR D N + E R+A + I G V+ ++ AK
Sbjct: 41 MARRSTHTDVKFPHFEDFRRRSTLDINKAARESEDHRRALPHAIYYGVGGVMTLLTAKES 100
Query: 246 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ ++ +AD A+A+IEV + IPEGQ+ TF+W+GKP+F++HR
Sbjct: 101 IQALVAFKGMAADQKALASIEVKMEEIPEGQTKTFEWQGKPVFVKHR 147
>gi|452819394|gb|EME26454.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Galdieria
sulphuraria]
Length = 276
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 124/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++ Y+ G + A+ V+ FI +M SADVLA A+ EV L+ +PEG +V+
Sbjct: 109 DPSKRTVVYLWLGICKFITACIARVVILCFIYTMMPSADVLAEASTEVSLDSVPEGSTVS 168
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIRHR++ +I + + + LRDPQ D RV+DP WLV+IGICTHLGC+PIA
Sbjct: 169 VKWRGKPVFIRHRSEADIAKAKQDDHADLRDPQLDESRVEDPHWLVVIGICTHLGCIPIA 228
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
+AGD+GG++CPCHGSHYD SGRIRKGPAP+N+E+PPY+F ++G +I
Sbjct: 229 DAGDYGGWFCPCHGSHYDVSGRIRKGPAPSNLEIPPYKFTEDGKMI 274
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++ Y+ G + A+ V+ FI +M SADVLA A+ EV L+ +PEG +V+
Sbjct: 109 DPSKRTVVYLWLGICKFITACIARVVILCFIYTMMPSADVLAEASTEVSLDSVPEGSTVS 168
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 169 VKWRGKPVFIRHR 181
>gi|302771938|ref|XP_002969387.1| hypothetical protein SELMODRAFT_92007 [Selaginella moellendorffii]
gi|300162863|gb|EFJ29475.1| hypothetical protein SELMODRAFT_92007 [Selaginella moellendorffii]
Length = 197
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 125/167 (74%), Gaps = 1/167 (0%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ R A+ Y +A G+ V + + + I +MSASADV+A++++EVDL+ I EG ++T
Sbjct: 30 DPDRAAYIYFVATGTRFVYAAAIRVFILRLIMTMSASADVMALSSLEVDLSNIIEGSTIT 89
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT E+ T + ++ LRDPQ D++RV +P WL++IG+CTHLGCVP+
Sbjct: 90 VKWRGKPVFIRRRTPDEVATANSVPVNSLRDPQQDAERVVNPEWLIVIGVCTHLGCVPLP 149
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
NAGD+GG++CPCHGSHYD SGR+RKGPAP N+EVP Y+F D +LI
Sbjct: 150 NAGDYGGWFCPCHGSHYDVSGRVRKGPAPLNLEVPEYKFISDTTVLI 196
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ R A+ Y +A G+ V + + + I +MSASADV+A++++EVDL+ I EG ++T
Sbjct: 30 DPDRAAYIYFVATGTRFVYAAAIRVFILRLIMTMSASADVMALSSLEVDLSNIIEGSTIT 89
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 90 VKWRGKPVFIRRR 102
>gi|383865006|ref|XP_003707968.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Megachile rotundata]
Length = 222
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 132/195 (67%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ +F +YRR D N + +R+A TY + SV GM KS + ++
Sbjct: 26 AHTDLPKVNFQEYRRKKLKDPNVSARKSIDERRAATYAASFVGSVAGMYGFKSHLLHYVM 85
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
M+ S +VLA A IE+ L I G+ KWRGKP+F+ HR Q ID EQ N+S+LRDP
Sbjct: 86 FMAPSREVLAEAQIEISLQGITVGKVSVLKWRGKPIFVYHRPQSMIDQEQQVNVSELRDP 145
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
Q+D +R K P WL+++GICTHLGCVP+ NAG GG++CPCHGSH+DASGRIRKGPAPTN
Sbjct: 146 QSDDERTKKPEWLIVVGICTHLGCVPVPNAGIIPGGFFCPCHGSHFDASGRIRKGPAPTN 205
Query: 178 MEVPPYQFGDEGILI 192
ME+P Y+F D+ ++
Sbjct: 206 MEIPEYRFLDDDTVL 220
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ +F +YRR D N + +R+A TY + SV GM KS + ++
Sbjct: 26 AHTDLPKVNFQEYRRKKLKDPNVSARKSIDERRAATYAASFVGSVAGMYGFKSHLLHYVM 85
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ S +VLA A IE+ L I G+ KWRGKP+F+ HR
Sbjct: 86 FMAPSREVLAEAQIEISLQGITVGKVSVLKWRGKPIFVYHR 126
>gi|168001112|ref|XP_001753259.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695545|gb|EDQ81888.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 196
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 125/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ +KAF Y++ G + + + + I SMSAS DVLA+A++EVD++ I G +VT
Sbjct: 29 DPSKKAFAYLVLTGGRFIYASALRILALKLILSMSASRDVLALASLEVDISSIEPGSTVT 88
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+F+RHRT+ +I +T +++LRDP+ D+ RV +P WLV++G+CTHLGCVP+
Sbjct: 89 VKWRGKPVFVRHRTEADIKLANSTPLNELRDPEDDAARVLNPEWLVVVGVCTHLGCVPLP 148
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y+F +E L+
Sbjct: 149 NAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPQYKFTEETKLL 194
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ +KAF Y++ G + + + + I SMSAS DVLA+A++EVD++ I G +VT
Sbjct: 29 DPSKKAFAYLVLTGGRFIYASALRILALKLILSMSASRDVLALASLEVDISSIEPGSTVT 88
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+F+RHR
Sbjct: 89 VKWRGKPVFVRHR 101
>gi|170591869|ref|XP_001900692.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit family
protein [Brugia malayi]
gi|158591844|gb|EDP30447.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit family
protein [Brugia malayi]
Length = 272
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 125/196 (63%), Gaps = 5/196 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPD-----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
L H+DIR P + R D + E+ +R ++ G + V + A V
Sbjct: 74 LIHTDIRFPKYDDERSKAASDSTKAARDTEDFRRVTAQGLLFGVNGAVYLYMATKFVQSL 133
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HRTQ +I ++ N+++LR
Sbjct: 134 VTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHRTQDDIGKAKSVNLNELR 193
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
DPQ D +RVK WLV IG+C HLGCVP+A GD+GGYYCPCHGS +D SGRIR GPAPT
Sbjct: 194 DPQTDDERVKKDEWLVTIGVCPHLGCVPLAGKGDFGGYYCPCHGSTFDTSGRIRLGPAPT 253
Query: 177 NMEVPPYQFGDEGILI 192
N+EVPPYQ D LI
Sbjct: 254 NLEVPPYQITDNNKLI 269
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 193 RMLAHSDIRTPDFSKYRRDRNPD-----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVN 247
R L H+DIR P + R D + E+ +R ++ G + V + A V
Sbjct: 72 RRLIHTDIRFPKYDDERSKAASDSTKAARDTEDFRRVTAQGLLFGVNGAVYLYMATKFVQ 131
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HR
Sbjct: 132 SLVTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHR 176
>gi|62319688|dbj|BAD95225.1| ubiquinol--cytochrome-c reductase - like protein [Arabidopsis
thaliana]
Length = 180
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 121/166 (72%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + +V + I SMSAS DVLA+A++EVDL I G +VT
Sbjct: 13 DPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVT 72
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I + ++ LRDPQ DS RVK+P WL+++G+CTHLGC+P+
Sbjct: 73 VKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQEDSVRVKNPEWLIVVGVCTHLGCIPLP 132
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 133 NAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 178
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + +V + I SMSAS DVLA+A++EVDL I G +VT
Sbjct: 13 DPSKRAFAYFVLSGGRFVYASVLRLLVLKLIVSMSASKDVLALASLEVDLGSIEPGTTVT 72
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 73 VKWRGKPVFIRRR 85
>gi|157833692|pdb|1RIE|A Chain A, Structure Of A Water Soluble Fragment Of The Rieske Iron-
Sulfur Protein Of The Bovine Heart Mitochondrial
Cytochrome Bc1-complex
Length = 129
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 109/127 (85%)
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDPQ D +RV
Sbjct: 1 VLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLERV 60
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
K P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+EVP Y+F
Sbjct: 61 KKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPSYEF 120
Query: 186 GDEGILI 192
+ ++I
Sbjct: 121 TSDDMVI 127
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 1 VLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 34
>gi|326521742|dbj|BAK00447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528929|dbj|BAJ97486.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 273
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDQYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT +I + +++ LR P+ D++RVK+P WL
Sbjct: 151 LEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDIKLANSVDVASLRHPEQDAERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ N+GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++ +
Sbjct: 211 VVIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKM 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDQYNHERYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGSTVTVKWRGKPVFIRRR 178
>gi|326510969|dbj|BAJ91832.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326515984|dbj|BAJ88015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 129/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 91 YDEYNHKRYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 147
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ ++ + +++ LRDPQ D+ RVK+P WL
Sbjct: 148 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDVKLANSVDVASLRDPQEDAVRVKNPEWL 207
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ N+GD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F ++ +
Sbjct: 208 VVIGVCTHLGCIPLPNSGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEDNKM 267
Query: 192 I 192
+
Sbjct: 268 L 268
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y R P + ++AF Y + G V + +V +F+ SMSAS DVLA+A+
Sbjct: 91 YDEYNHKRYPPG---DPSKRAFAYFVLSGGRFVYASLLRLLVLKFVLSMSASKDVLALAS 147
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 148 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 175
>gi|302774613|ref|XP_002970723.1| hypothetical protein SELMODRAFT_94112 [Selaginella moellendorffii]
gi|300161434|gb|EFJ28049.1| hypothetical protein SELMODRAFT_94112 [Selaginella moellendorffii]
Length = 262
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 87/163 (53%), Positives = 124/163 (76%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R A+ Y +A G+ V + + + + +MSASADV+A++++EVDL+ I EG ++T KW
Sbjct: 98 RAAYIYFVATGTRFVYAAAIRVFILRLVMTMSASADVMALSSLEVDLSNIIEGSTITVKW 157
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+FIR RT E+ T + ++ LRDPQ D++RV +P WL++IG+CTHLGCVP+ NAG
Sbjct: 158 RGKPVFIRRRTPDEVATANSVPVNSLRDPQQDAERVVNPEWLIVIGVCTHLGCVPLPNAG 217
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
D+GG++CPCHGSHYD SGR+RKGPAP N+EVP Y+F + I++
Sbjct: 218 DYGGWFCPCHGSHYDVSGRVRKGPAPLNLEVPEYKFISDTIVL 260
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R A+ Y +A G+ V + + + + +MSASADV+A++++EVDL+ I EG ++T KW
Sbjct: 98 RAAYIYFVATGTRFVYAAAIRVFILRLVMTMSASADVMALSSLEVDLSNIIEGSTITVKW 157
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 158 RGKPVFIRRR 167
>gi|219118259|ref|XP_002179908.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408961|gb|EEC48894.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 179
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 124/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E +R+AFTY++ A+ +V +F++SMSASADVLA+A E DL+ I G+++T
Sbjct: 12 EPERRAFTYLMLSSVRFAYASAARLLVVKFVASMSASADVLALAFSEFDLSSIEMGKTIT 71
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR R+ EI TE + LRD + D+DR P ++V++GIC HLGCVP++
Sbjct: 72 AKWRGKPVFIRRRSAAEIATEAAVPMEYLRDQETDADRTLKPEFIVVLGICPHLGCVPVS 131
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGP+P N+EVPPY+F DE +++
Sbjct: 132 NAGDFGGWFCPCHGSHYDKSGRIRKGPSPLNLEVPPYKFIDENVIL 177
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E +R+AFTY++ A+ +V +F++SMSASADVLA+A E DL+ I G+++T
Sbjct: 12 EPERRAFTYLMLSSVRFAYASAARLLVVKFVASMSASADVLALAFSEFDLSSIEMGKTIT 71
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 72 AKWRGKPVFIRRR 84
>gi|401884857|gb|EJT48995.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, precursor
[Trichosporon asahii var. asahii CBS 2479]
gi|406694417|gb|EKC97744.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Trichosporon
asahii var. asahii CBS 8904]
Length = 263
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 120/179 (67%), Gaps = 7/179 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF+ Y K + +Y + G + AKS V +S+M+ASADVLA+
Sbjct: 85 PDFTPY-------KTSNADSNRTLSYFMVGTLGALAASGAKSTVTDILSNMAASADVLAL 137
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A IEV++ IP G+++ KWRGKP+FIRHRT EI + ++ LRDP+ D R + P
Sbjct: 138 AKIEVEMGSIPLGKNLIVKWRGKPVFIRHRTPDEIAEANDVDVKTLRDPETDEQRTQRPE 197
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y F D+
Sbjct: 198 WLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPEYSFNDD 256
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF+ Y K + +Y + G + AKS V +S+M+ASADVLA+
Sbjct: 85 PDFTPY-------KTSNADSNRTLSYFMVGTLGALAASGAKSTVTDILSNMAASADVLAL 137
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A IEV++ IP G+++ KWRGKP+FIRHR
Sbjct: 138 AKIEVEMGSIPLGKNLIVKWRGKPVFIRHR 167
>gi|307190359|gb|EFN74418.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Camponotus
floridanus]
Length = 199
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 138/196 (70%), Gaps = 6/196 (3%)
Query: 3 AHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+DI P+F +YRR ++P+K E +R+A ++ V G+ KS + ++
Sbjct: 3 AHTDIPKPNFEEYRRKSTQDPEKPAAENIDKRRALRSAVSFAGWVAGLYAFKSHLLHYVF 62
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+S S D+LA A +EV L+ IPEG+ KWRGKP+FI HR Q I+ E+ ++S+LRDP
Sbjct: 63 FLSPSRDILAEAQLEVKLDNIPEGKVSIVKWRGKPVFIYHRPQSIIEQERAVSLSELRDP 122
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
+ D DR+K P WL+++GICTHLGCVPI NAG GG++CPCHGSH+DA+GRIRKGPAPTN
Sbjct: 123 ETDDDRIKKPEWLIVLGICTHLGCVPIPNAGIIPGGFFCPCHGSHFDAAGRIRKGPAPTN 182
Query: 178 MEVPPYQF-GDEGILI 192
ME+P ++F D+ I+I
Sbjct: 183 MEIPEHKFINDDRIII 198
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+DI P+F +YRR ++P+K E +R+A ++ V G+ KS + ++
Sbjct: 3 AHTDIPKPNFEEYRRKSTQDPEKPAAENIDKRRALRSAVSFAGWVAGLYAFKSHLLHYVF 62
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+S S D+LA A +EV L+ IPEG+ KWRGKP+FI HR
Sbjct: 63 FLSPSRDILAEAQLEVKLDNIPEGKVSIVKWRGKPVFIYHR 103
>gi|340709742|ref|XP_003393461.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Bombus terrestris]
Length = 228
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 134/195 (68%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ F +YRR + N + +RK +Y+++ SV G+ KS + +I
Sbjct: 32 AHTDLPKTSFQEYRRKSLQNSNVSTKRSINERKTSSYVMSFVGSVAGLYGFKSHLLHYIL 91
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SM+ + ++LA A IE++L IP G+ FKWRGKP+FI HR+Q I+ E+ N++ LRDP
Sbjct: 92 SMAPARNILAEAQIEINLRDIPVGKVSVFKWRGKPIFIYHRSQSIIEQEKVINVATLRDP 151
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
+ D RVK WL++IGICTHLGC+PI N+G GG+YCPCHGSH+DASGRIRKGPAPTN
Sbjct: 152 ETDDQRVKRAEWLIVIGICTHLGCIPIPNSGIVRGGFYCPCHGSHFDASGRIRKGPAPTN 211
Query: 178 MEVPPYQFGDEGILI 192
+EVP YQF D+ ++
Sbjct: 212 LEVPEYQFLDDDTIL 226
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ F +YRR + N + +RK +Y+++ SV G+ KS + +I
Sbjct: 32 AHTDLPKTSFQEYRRKSLQNSNVSTKRSINERKTSSYVMSFVGSVAGLYGFKSHLLHYIL 91
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SM+ + ++LA A IE++L IP G+ FKWRGKP+FI HR
Sbjct: 92 SMAPARNILAEAQIEINLRDIPVGKVSVFKWRGKPIFIYHR 132
>gi|346427226|gb|AEO27917.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
eubayanus]
gi|346427228|gb|AEO27918.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427230|gb|AEO27919.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427232|gb|AEO27920.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427238|gb|AEO27923.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
Length = 187
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 5 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + +S L+DPQ D+D
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVEMSALKDPQTDAD 138
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
RVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKG
Sbjct: 139 RVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKG 187
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 114
>gi|402588592|gb|EJW82525.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Wuchereria
bancrofti]
Length = 273
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 125/197 (63%), Gaps = 6/197 (3%)
Query: 2 LAHSDIRTPDFSKYRRDR------NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 55
L H+DIR P + R + + E+ +R ++ G + V + A V
Sbjct: 74 LIHTDIRFPKYYDDERSKVASDSTKAARDTEDFRRVTAQGLLFGVNGAVYLYMATKFVQS 133
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HRTQ +I ++ N+++L
Sbjct: 134 LVTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHRTQDDIGKAKSVNLNEL 193
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
RDPQ D +RVK WLV IG+C HLGCVP+A GD+GGYYCPCHGS +D SGRIR GPAP
Sbjct: 194 RDPQTDDERVKKDEWLVTIGVCPHLGCVPLAGKGDFGGYYCPCHGSTFDTSGRIRLGPAP 253
Query: 176 TNMEVPPYQFGDEGILI 192
TN+EVPPYQ D LI
Sbjct: 254 TNLEVPPYQITDNNKLI 270
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 193 RMLAHSDIRTPDFSKYRRDR------NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV 246
R L H+DIR P + R + + E+ +R ++ G + V + A V
Sbjct: 72 RRLIHTDIRFPKYYDDERSKVASDSTKAARDTEDFRRVTAQGLLFGVNGAVYLYMATKFV 131
Query: 247 NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HR
Sbjct: 132 QSLVTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHR 177
>gi|346427234|gb|AEO27921.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427236|gb|AEO27922.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427240|gb|AEO27924.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
uvarum]
Length = 187
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 123/169 (72%), Gaps = 7/169 (4%)
Query: 5 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D+D
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSVLKDPQTDAD 138
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
RVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKG
Sbjct: 139 RVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKG 187
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 114
>gi|346326646|gb|EGX96242.1| cytochrome c reductase iron-sulfur subunit [Cordyceps militaris
CM01]
Length = 135
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 109/133 (81%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHRT +EI IS LRDPQ
Sbjct: 1 MSASADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHRTAEEIAEANKVEISSLRDPQ 60
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
+D DRV+ P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+E
Sbjct: 61 SDDDRVQKPEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLE 120
Query: 180 VPPYQFGDEGILI 192
+P Y+F +E LI
Sbjct: 121 IPAYEFPEEDKLI 133
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASADVLAMA +EVDL+ IPEG++V KWRGKP+FIRHR
Sbjct: 1 MSASADVLAMAKVEVDLSTIPEGKNVIIKWRGKPVFIRHR 40
>gi|346427243|gb|AEO27925.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
gi|346427247|gb|AEO27927.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
Length = 187
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 122/169 (72%), Gaps = 7/169 (4%)
Query: 5 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + +S L+DPQ D+D
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVXMSXLKDPQTDAD 138
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
RVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKG
Sbjct: 139 RVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKG 187
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 63/96 (65%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F ++ N PDKG +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 114
>gi|302695515|ref|XP_003037436.1| hypothetical protein SCHCODRAFT_46074 [Schizophyllum commune H4-8]
gi|300111133|gb|EFJ02534.1| hypothetical protein SCHCODRAFT_46074 [Schizophyllum commune H4-8]
Length = 159
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 119/157 (75%), Gaps = 1/157 (0%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G ++ AKS + +F+ +MSASADVLA+A +EV++ IPEG++V KWRGKP+FI
Sbjct: 1 MVGSMGLLSASVAKSSIAEFLRTMSASADVLALAKVEVEMGSIPEGKNVIIKWRGKPVFI 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRTQ EID ++ + RDP+ D RVK P WLV++G+CTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTQSEIDEARSADWKTFRDPEPDEARVKKPEWLVMLGVCTHLGCVPIGEAGDYGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-EGILI 192
PCHGSHYD SGR RKGPAPTN+E+P Y+ + EG ++
Sbjct: 121 PCHGSHYDISGRARKGPAPTNLEIPEYEINEAEGKMV 157
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G ++ AKS + +F+ +MSASADVLA+A +EV++ IPEG++V KWRGKP+FI
Sbjct: 1 MVGSMGLLSASVAKSSIAEFLRTMSASADVLALAKVEVEMGSIPEGKNVIIKWRGKPVFI 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|440804074|gb|ELR24955.1| ubiquinol cytochrome reductase transmembrane region, putative
[Acanthamoeba castellanii str. Neff]
Length = 235
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 130/185 (70%), Gaps = 5/185 (2%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
+I PD+ Y+R+ +G E R AF+YM+ G + V AK V +F+ SM+ +A+
Sbjct: 44 EINVPDWGHYKREAQ--EGGESGGR-AFSYMVLGTAGVGYAAAAKHTVIKFLDSMNPAAN 100
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
V AMA +EVD++ I EG +T KWRGKPLFIRHRT +EI ++ ++ +RDP D+ R
Sbjct: 101 VRAMANVEVDVSNIAEGTIMTVKWRGKPLFIRHRTAEEIADAESAPLTDMRDPCPDAARR 160
Query: 126 K--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
K P WL+++G+CTHLGCVP+ G++GG++CPCHGSHYD +GRIRKGPAP N+EVPPY
Sbjct: 161 KADKPEWLIVLGVCTHLGCVPLGGQGEYGGWFCPCHGSHYDTAGRIRKGPAPLNLEVPPY 220
Query: 184 QFGDE 188
F D+
Sbjct: 221 VFKDD 225
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
+I PD+ Y+R+ +G E R AF+YM+ G + V AK V +F+ SM+ +A+
Sbjct: 44 EINVPDWGHYKREAQ--EGGESGGR-AFSYMVLGTAGVGYAAAAKHTVIKFLDSMNPAAN 100
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V AMA +EVD++ I EG +T KWRGKPLFIRHR
Sbjct: 101 VRAMANVEVDVSNIAEGTIMTVKWRGKPLFIRHR 134
>gi|238589262|ref|XP_002391967.1| hypothetical protein MPER_08520 [Moniliophthora perniciosa FA553]
gi|215457369|gb|EEB92897.1| hypothetical protein MPER_08520 [Moniliophthora perniciosa FA553]
Length = 146
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 113/145 (77%)
Query: 37 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 96
+ G V+ AKS V +F+ +MSASADVLA+A +EVDL+ IPEG++V KWRGKP+F+
Sbjct: 1 MVGTMGVLSASVAKSSVTEFLKTMSASADVLALAKVEVDLSAIPEGKNVIIKWRGKPVFV 60
Query: 97 RHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYC 156
RHRTQ EI+ ++T+ RDPQ+D +R K P WLV++G+CTHLGCVPI AGD+GG++C
Sbjct: 61 RHRTQSEIEEARSTDWKSFRDPQSDEERTKKPEWLVMLGVCTHLGCVPIGEAGDFGGWFC 120
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVP 181
PCHGSHYD SGR RKGPAP N+E P
Sbjct: 121 PCHGSHYDISGRARKGPAPLNLESP 145
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 48/63 (76%)
Query: 230 IAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFI 289
+ G V+ AKS V +F+ +MSASADVLA+A +EVDL+ IPEG++V KWRGKP+F+
Sbjct: 1 MVGTMGVLSASVAKSSVTEFLKTMSASADVLALAKVEVDLSAIPEGKNVIIKWRGKPVFV 60
Query: 290 RHR 292
RHR
Sbjct: 61 RHR 63
>gi|346427245|gb|AEO27926.1| mitochondrial ubiquinol-cytochrome c reductase [Saccharomyces
bayanus]
Length = 187
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
Query: 5 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S RTP+F ++ N PD G +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDXG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + +S L+DPQ D+D
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVXMSXLKDPQTDAD 138
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
RVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKG
Sbjct: 139 RVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKG 187
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 7/96 (7%)
Query: 198 SDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S RTP+F ++ N PD G +++ Y + G ++ AKS V FISSM+A+
Sbjct: 25 STYRTPNFDDVLKENNDPDXG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMTAT 78
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 79 ADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 114
>gi|312087568|ref|XP_003145523.1| ubiquinol-cytochrome c reductase [Loa loa]
gi|307759314|gb|EFO18548.1| ubiquinol-cytochrome c reductase [Loa loa]
Length = 272
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 123/197 (62%), Gaps = 6/197 (3%)
Query: 2 LAHSDIRTPDFSKYRRDR------NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQ 55
L H+D+ P + R + E+ +R ++ G + V + A V
Sbjct: 73 LIHTDVTFPKYRDGERTNAASDSTKAARDTEDLRRATAQGLLFGVNGAVYLYMATKFVQS 132
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HRTQ +I+ ++ N+S+L
Sbjct: 133 LVTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHRTQDDIEKAKSVNLSEL 192
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
RDPQ D +RVK WLV IG+C HLGCVP+A GD+GGYYCPCHGS +D SGRIR GPAP
Sbjct: 193 RDPQTDDERVKKDEWLVTIGVCPHLGCVPLAGKGDFGGYYCPCHGSTFDTSGRIRLGPAP 252
Query: 176 TNMEVPPYQFGDEGILI 192
N+EVPPYQ D LI
Sbjct: 253 NNLEVPPYQITDNNKLI 269
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 193 RMLAHSDIRTPDFSKYRRDR------NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVV 246
R L H+D+ P + R + E+ +R ++ G + V + A V
Sbjct: 71 RRLIHTDVTFPKYRDGERTNAASDSTKAARDTEDLRRATAQGLLFGVNGAVYLYMATKFV 130
Query: 247 NQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ S AD LAMA E+DL+ IPEGQ T+ WRGKPLF+ HR
Sbjct: 131 QSLVTYKSMPADQLAMANTEIDLDEIPEGQCKTYTWRGKPLFVAHR 176
>gi|350420510|ref|XP_003492532.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Bombus impatiens]
Length = 228
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 133/195 (68%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ F +YRR + N + +RK +Y+++ V G+ KS + +I
Sbjct: 32 AHTDLPKVSFQEYRRKSLQNSNVSTKRSIDERKTSSYVMSFVGGVAGLYGFKSHLLHYIV 91
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
S++ + ++LA A IE++L IP G+ FKWRGKP+FI HR+Q I+ E+ N++ LRDP
Sbjct: 92 SLAPARNILAEAQIEINLQDIPVGKVSVFKWRGKPIFIYHRSQSIIEQEKVINVATLRDP 151
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
+ D RVK WL++IGICTHLGC+PI N+G GG+YCPCHGSH+DASGRIRKGPAPTN
Sbjct: 152 ETDDQRVKRAEWLIVIGICTHLGCIPIPNSGIIRGGFYCPCHGSHFDASGRIRKGPAPTN 211
Query: 178 MEVPPYQFGDEGILI 192
+E+P YQF D+ ++
Sbjct: 212 LEIPEYQFLDDDTIL 226
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ F +YRR + N + +RK +Y+++ V G+ KS + +I
Sbjct: 32 AHTDLPKVSFQEYRRKSLQNSNVSTKRSIDERKTSSYVMSFVGGVAGLYGFKSHLLHYIV 91
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S++ + ++LA A IE++L IP G+ FKWRGKP+FI HR
Sbjct: 92 SLAPARNILAEAQIEINLQDIPVGKVSVFKWRGKPIFIYHR 132
>gi|29841428|gb|AAP06460.1| similar to GenBank Accession Number AK003966 ubiquinol-cytochrome c
reductase iron-sulfur subunit, mitochondrial precursor
(EC 1 [Schistosoma japonicum]
Length = 253
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 6/178 (3%)
Query: 2 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 56
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 57 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLR 116
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR+ +EI E+ ++ LR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHRSAEEIARERAVPLTSLR 191
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGP 173
DPQ D DRVK+ WL+ +G+CTHLGC+PIA++GD+ GGYYCPCHGSHYDASGRIRKGP
Sbjct: 192 DPQKDEDRVKEDKWLICVGVCTHLGCIPIAHSGDFPGGYYCPCHGSHYDASGRIRKGP 249
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 195 LAHSDI-RTPDFSKYRRDRNPD----KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQF 249
AH+D+ PDF+ YR D D + QRK FTY + ++V+ AK + F
Sbjct: 72 FAHTDVTNVPDFTNYRVDSTKDPHSRAADTDLQRKVFTYTMMFAATVIATTSAKYTIKTF 131
Query: 250 ISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I + S +A A+ EV+L IPEG+++T KWR KPLFIRHR
Sbjct: 132 IKPLGPSTRTMAEASTEVNLAAIPEGKNITVKWRNKPLFIRHR 174
>gi|110764586|ref|XP_001121362.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Apis mellifera]
gi|380028677|ref|XP_003698018.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Apis florea]
Length = 228
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 133/196 (67%), Gaps = 6/196 (3%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AH+D+ PDF +YRR + N + +R+ Y + + V + KS + +I
Sbjct: 32 AHTDLPKPDFQEYRRKSLLNSNISAKRSTDERRTANYAASFVAGVAALYGLKSHILHYIF 91
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
++ S +LA A IE+ L IP G+ FKW+GKP+F+ HR+Q ID E+ NI++LRDP
Sbjct: 92 FLAPSRGILAEAQIEISLRDIPVGKVSIFKWQGKPIFVYHRSQSIIDQERLVNIAELRDP 151
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTN 177
++D++R K P WL++IGICTHLGCVPI NAG GG+YCPCH SH+DA+GRIR+GPAPTN
Sbjct: 152 ESDNERAKRPEWLIVIGICTHLGCVPIPNAGIIRGGFYCPCHASHFDAAGRIRRGPAPTN 211
Query: 178 MEVPPYQF-GDEGILI 192
+E+P Y+F D+ IL+
Sbjct: 212 LEIPEYKFLTDDTILV 227
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
AH+D+ PDF +YRR + N + +R+ Y + + V + KS + +I
Sbjct: 32 AHTDLPKPDFQEYRRKSLLNSNISAKRSTDERRTANYAASFVAGVAALYGLKSHILHYIF 91
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ S +LA A IE+ L IP G+ FKW+GKP+F+ HR
Sbjct: 92 FLAPSRGILAEAQIEISLRDIPVGKVSIFKWQGKPIFVYHR 132
>gi|268607722|ref|NP_001161318.1| ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide
1-like [Nasonia vitripennis]
Length = 236
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 133/194 (68%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H D P+F + R+D +NP E+ +RK Y+ + V G+ +K++++Q + +
Sbjct: 41 HGDYPKPEFDELRKDSTKNPCVKNSESADERKVAAYLPTFVAGVAGLYASKAIIHQHLMT 100
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ S DVLA A EV++ IPE + KW+G+P+FI HR+Q+ I E+ NI +LRDP+
Sbjct: 101 MAPSRDVLAAAKTEVNIANIPENKVQIIKWQGRPVFIYHRSQELIGQERAMNIVELRDPE 160
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTNM 178
DS R+K P W+V+IGICTHLGCVPI NAG GG++CPCHGSH+D +GR+RKGPAP N+
Sbjct: 161 EDSARLKRPEWMVLIGICTHLGCVPIPNAGVVPGGFFCPCHGSHFDTAGRVRKGPAPKNL 220
Query: 179 EVPPYQFGDEGILI 192
VPPYQF D+ L+
Sbjct: 221 AVPPYQFTDDQNLL 234
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 4/104 (3%)
Query: 193 RMLAHSDIRTPDFSKYRRD--RNPDKGQEET--QRKAFTYMIAGGSSVVGMVCAKSVVNQ 248
R + H D P+F + R+D +NP E+ +RK Y+ + V G+ +K++++Q
Sbjct: 37 RSVYHGDYPKPEFDELRKDSTKNPCVKNSESADERKVAAYLPTFVAGVAGLYASKAIIHQ 96
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ +M+ S DVLA A EV++ IPE + KW+G+P+FI HR
Sbjct: 97 HLMTMAPSRDVLAAAKTEVNIANIPENKVQIIKWQGRPVFIYHR 140
>gi|323305184|gb|EGA58931.1| Rip1p [Saccharomyces cerevisiae FostersB]
Length = 198
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 123/174 (70%), Gaps = 7/174 (4%)
Query: 3 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 61
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 62 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD 121
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ D
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQTD 143
Query: 122 SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGR +KG P
Sbjct: 144 ADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRDQKGTCP 197
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 7/98 (7%)
Query: 196 AHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMS 254
+ S RTP+F ++ N DKG +++ Y + G ++ AKS V FISSM+
Sbjct: 30 SKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISSMT 83
Query: 255 ASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 84 ATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>gi|281204982|gb|EFA79176.1| ubiquinol-cytochrome-c reductase subunit [Polysphondylium pallidum
PN500]
Length = 218
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 128/174 (73%), Gaps = 4/174 (2%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
F KYR + + + + + +TYM+ GG++ AK+ V +S+M+ D+LA+++
Sbjct: 38 FDKYRTEPS----TVDPEGRGYTYMVVGGAATGLAAMAKNTVVSALSTMAPGQDILALSS 93
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
IE+DL+ IPE +VT KWRGKPLFIRHR+ +EI++ + +++ L DP+AD R K P W+
Sbjct: 94 IEIDLSSIPEATAVTLKWRGKPLFIRHRSSEEIESSKEVDVTSLPDPEADDKRAKVPEWV 153
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G+CTHLGC+PIA GD+GG+YCPCHGSHYD +GRIRKGPAP N+ +PPY+F
Sbjct: 154 VLVGVCTHLGCIPIAGGGDFGGWYCPCHGSHYDNAGRIRKGPAPQNLIIPPYKF 207
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
F KYR + + + + + +TYM+ GG++ AK+ V +S+M+ D+LA+++
Sbjct: 38 FDKYRTEPS----TVDPEGRGYTYMVVGGAATGLAAMAKNTVVSALSTMAPGQDILALSS 93
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IE+DL+ IPE +VT KWRGKPLFIRHR
Sbjct: 94 IEIDLSSIPEATAVTLKWRGKPLFIRHR 121
>gi|330840592|ref|XP_003292297.1| hypothetical protein DICPUDRAFT_82910 [Dictyostelium purpureum]
gi|325077467|gb|EGC31177.1| hypothetical protein DICPUDRAFT_82910 [Dictyostelium purpureum]
Length = 215
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 125/181 (69%), Gaps = 4/181 (2%)
Query: 5 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 64
S T F KY+ ++N Q + + + F Y++ GG+ AK+ V +S+MS
Sbjct: 28 SSFPTEHFKKYKAEKN----QVDPENRGFAYLVVGGAGAGLGAIAKNTVVSALSTMSPGQ 83
Query: 65 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR 124
D+LA++++EVDL+ IPE +V KWRGKPLFIRHR+ EI Q +S L DPQ D+ R
Sbjct: 84 DILALSSVEVDLSGIPEETAVVVKWRGKPLFIRHRSAHEISESQAVELSSLPDPQPDNAR 143
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
VK P W+V++G+CTHLGC+PI+ GD+ G+YCPCHGSHYD +GRIRKGPAP N+ VPPY+
Sbjct: 144 VKVPEWVVLVGVCTHLGCIPISGGGDYHGWYCPCHGSHYDNAGRIRKGPAPMNLIVPPYK 203
Query: 185 F 185
F
Sbjct: 204 F 204
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 198 SDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASA 257
S T F KY+ ++N Q + + + F Y++ GG+ AK+ V +S+MS
Sbjct: 28 SSFPTEHFKKYKAEKN----QVDPENRGFAYLVVGGAGAGLGAIAKNTVVSALSTMSPGQ 83
Query: 258 DVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
D+LA++++EVDL+ IPE +V KWRGKPLFIRHR
Sbjct: 84 DILALSSVEVDLSGIPEETAVVVKWRGKPLFIRHR 118
>gi|166240368|ref|XP_639948.2| ubiquinol-cytochrome-c reductase subunit [Dictyostelium discoideum
AX4]
gi|165988563|gb|EAL64937.2| ubiquinol-cytochrome-c reductase subunit [Dictyostelium discoideum
AX4]
Length = 214
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/177 (50%), Positives = 125/177 (70%), Gaps = 4/177 (2%)
Query: 9 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
T F KYR ++N + + + + F Y++ GG+ AK+ V +S+MS D+LA
Sbjct: 31 TSHFEKYRAEKN----EVDPENRGFAYLVVGGAGAGLAAIAKNTVVTALSTMSPGQDILA 86
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP 128
++++EVDL+ IPE +V KWRGKPLFIRHR+ +EI Q +S L DPQAD+ R K P
Sbjct: 87 LSSVEVDLSGIPESTAVVVKWRGKPLFIRHRSAEEISESQAVQLSTLPDPQADNARSKVP 146
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
W++++G+CTHLGC+PI+ GD+ G+YCPCHGSHYD +GRIRKGPAP N+ VPPY+F
Sbjct: 147 EWIILVGVCTHLGCIPISGGGDYNGWYCPCHGSHYDNAGRIRKGPAPMNLIVPPYKF 203
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 202 TPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
T F KYR ++N + + + + F Y++ GG+ AK+ V +S+MS D+LA
Sbjct: 31 TSHFEKYRAEKN----EVDPENRGFAYLVVGGAGAGLAAIAKNTVVTALSTMSPGQDILA 86
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++++EVDL+ IPE +V KWRGKPLFIRHR
Sbjct: 87 LSSVEVDLSGIPESTAVVVKWRGKPLFIRHR 117
>gi|116195208|ref|XP_001223416.1| hypothetical protein CHGG_04202 [Chaetomium globosum CBS 148.51]
gi|88180115|gb|EAQ87583.1| hypothetical protein CHGG_04202 [Chaetomium globosum CBS 148.51]
Length = 231
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 117/189 (61%), Gaps = 14/189 (7%)
Query: 4 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 63
S PDFSKY KG T F+Y + G + AKS +
Sbjct: 55 ESKTNVPDFSKYM-----SKGSGSTN-ALFSYFMVGTLGAISAAGAKSTIQPRCFG---- 104
Query: 64 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD 123
+EVDL IPEG++V KWRGKP+FIRHRT EID + N++ LRDP+ D
Sbjct: 105 ----PWPKVEVDLAAIPEGKNVIIKWRGKPVFIRHRTAAEIDEANSINVASLRDPETDDQ 160
Query: 124 RVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
RVK P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y
Sbjct: 161 RVKKPEWLVMLGVCTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLEIPTY 220
Query: 184 QFGDEGILI 192
F D+G L+
Sbjct: 221 DFSDDGKLV 229
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 197 HSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSAS 256
S PDFSKY KG T F+Y + G + AKS +
Sbjct: 55 ESKTNVPDFSKYM-----SKGSGSTN-ALFSYFMVGTLGAISAAGAKSTIQPRCFG---- 104
Query: 257 ADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL IPEG++V KWRGKP+FIRHR
Sbjct: 105 ----PWPKVEVDLAAIPEGKNVIIKWRGKPVFIRHR 136
>gi|321259205|ref|XP_003194323.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor [Cryptococcus gattii WM276]
gi|317460794|gb|ADV22536.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit, mitochondrial
precursor, putative [Cryptococcus gattii WM276]
Length = 299
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 126/199 (63%), Gaps = 27/199 (13%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSPYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
A IEV++ IPEG+++ KWRGKP+FIRHRT EI+ + ++ LRDP+ D R + P
Sbjct: 154 AKIEVEMGAIPEGKNLIVKWRGKPVFIRHRTPDEIEEANSVDVKSLRDPETDDQRTQRPE 213
Query: 130 WLVIIGICTHLGCVPI--------------------ANAGDWGGYYCPCHGSHYDASGRI 169
WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRI
Sbjct: 214 WLVMVGVCTHLGCVPIGEFSSINQTFCCWKMVNNIVGEAGDYGGWFCPCHGSHYDISGRI 273
Query: 170 RKGPAPTNMEVPPYQFGDE 188
R+GPAP N+E+P Y F D+
Sbjct: 274 RRGPAPLNLEIPEYTFNDD 292
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDFS YR +NP+ T R +Y + G +G KS +S+M+ASADVLA+
Sbjct: 101 PDFSPYRA-KNPN-----TTRN-VSYFMVGALGALGASSVKSTAVDMLSNMAASADVLAL 153
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A IEV++ IPEG+++ KWRGKP+FIRHR
Sbjct: 154 AKIEVEMGAIPEGKNLIVKWRGKPVFIRHR 183
>gi|313238835|emb|CBY13836.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 130/202 (64%), Gaps = 12/202 (5%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKG---------QEETQRKAFTYMIAGGSSVVGMVCAKSV 52
LAH+D P+ YR+ P + E +R + M ++ V A V
Sbjct: 21 LAHTDKVFPNLDYYRQAPAPAASSDFLDAQVEEAEVRRAHYYTMNVAINAAVTWGVANFV 80
Query: 53 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNI 112
+N ++ ++ S DVLA+AT+E++L + G+S F WRGKP+F++HRT ++I E +
Sbjct: 81 LNA-VNILNPSKDVLALATVEIELQGMAVGESGVFVWRGKPIFVKHRTPEDIAREAAVPM 139
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA--NAGDWGGYYCPCHGSHYDASGRIR 170
S+LRD Q D DRV DP WLV IGICTHLGCVP+A NAG++ GYYCPCHGSHYD SGRIR
Sbjct: 140 SELRDAQNDIDRVVDPDWLVCIGICTHLGCVPLAMDNAGEFNGYYCPCHGSHYDGSGRIR 199
Query: 171 KGPAPTNMEVPPYQFGDEGILI 192
KGPAP N+EVPPY F DE ++
Sbjct: 200 KGPAPLNLEVPPYSFMDEKTIL 221
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 10/107 (9%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKG---------QEETQRKAFTYMIAGGSSVVGMVCAKSV 245
LAH+D P+ YR+ P + E +R + M ++ V A V
Sbjct: 21 LAHTDKVFPNLDYYRQAPAPAASSDFLDAQVEEAEVRRAHYYTMNVAINAAVTWGVANFV 80
Query: 246 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+N ++ ++ S DVLA+AT+E++L + G+S F WRGKP+F++HR
Sbjct: 81 LNA-VNILNPSKDVLALATVEIELQGMAVGESGVFVWRGKPIFVKHR 126
>gi|302853306|ref|XP_002958169.1| hypothetical protein VOLCADRAFT_77835 [Volvox carteri f.
nagariensis]
gi|300256530|gb|EFJ40794.1| hypothetical protein VOLCADRAFT_77835 [Volvox carteri f.
nagariensis]
Length = 267
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 119/165 (72%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 101 TEGRPFAYFVQTGGRFLYASAARLAVLKIVLSLSAAADTMAVSSLEVDLSGVEEGSTITV 160
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
KWRGKP+FIRHRT EI +S+LRD Q D DR +P +LV++GICTHLGCVPIA
Sbjct: 161 KWRGKPVFIRHRTDAEIQESAEVALSELRDAQKDVDRAVNPKYLVVVGICTHLGCVPIAG 220
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
AG++ G++CPCHGSHYD SGRIR+GPAP N+EVP Y+F DE ++
Sbjct: 221 AGNYHGWFCPCHGSHYDISGRIREGPAPYNLEVPEYRFVDEKKIV 265
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 101 TEGRPFAYFVQTGGRFLYASAARLAVLKIVLSLSAAADTMAVSSLEVDLSGVEEGSTITV 160
Query: 281 KWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 161 KWRGKPVFIRHR 172
>gi|358341927|dbj|GAA49500.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Clonorchis
sinensis]
Length = 176
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 117/164 (71%), Gaps = 4/164 (2%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ ++ G VV AK V F+ + +A LA A+ EV++ IPEG+++ KW
Sbjct: 14 RRPLVELLGG---VVATTAAKYTVKTFVMPLGPTAKTLAEASTEVNIASIPEGKNLVVKW 70
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
R KPLF+RHRTQ+EI+ E++ + +LR PQ D RV+ P WL+ +G+CTHLGCVPIA+AG
Sbjct: 71 RNKPLFVRHRTQEEIERERSVPLHELRHPQTDESRVQRPEWLICLGVCTHLGCVPIAHAG 130
Query: 150 DW-GGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
++ GGYYCPCHGSHYDASGRIRKGPAP N+E+P Y F D+ ++
Sbjct: 131 EYPGGYYCPCHGSHYDASGRIRKGPAPLNLEIPEYNFVDDSTVV 174
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ ++ G VV AK V F+ + +A LA A+ EV++ IPEG+++ KW
Sbjct: 14 RRPLVELLGG---VVATTAAKYTVKTFVMPLGPTAKTLAEASTEVNIASIPEGKNLVVKW 70
Query: 283 RGKPLFIRHR 292
R KPLF+RHR
Sbjct: 71 RNKPLFVRHR 80
>gi|392378568|ref|YP_004985728.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit [Azospirillum
brasilense Sp245]
gi|356880050|emb|CCD00995.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit [Azospirillum
brasilense Sp245]
Length = 189
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 115/167 (68%), Gaps = 8/167 (4%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E R+ F Y+ G VG + S V FI SM+ +AD LA+A+I+VDL + EGQ
Sbjct: 17 GGEGASRRDFLYLATG---AVGAIGVASAVWPFIDSMNPAADTLALASIDVDLAPVQEGQ 73
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCV 143
++T WRGKP+F+RHRT KEI+ + N+ +LRDP AD RVK P WL+++GICTHLGCV
Sbjct: 74 AITVTWRGKPVFVRHRTAKEIEEARTVNLGELRDPAADDARVKKPEWLIVVGICTHLGCV 133
Query: 144 PIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
P+ GD+ G++CPCHGSHYD +GRIRKGPAP N+ VP Y F
Sbjct: 134 PLGQKPTDPRGDYDGWFCPCHGSHYDTAGRIRKGPAPANLVVPQYAF 180
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E R+ F Y+ G VG + S V FI SM+ +AD LA+A+I+VDL + EGQ
Sbjct: 17 GGEGASRRDFLYLATG---AVGAIGVASAVWPFIDSMNPAADTLALASIDVDLAPVQEGQ 73
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 74 AITVTWRGKPVFVRHR 89
>gi|260424007|gb|ACX37502.1| Rieske-like apoprotein [Crassostrea gigas]
Length = 262
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+DI PDF YR + N + + + +RK ++Y + GG+S + K +V +
Sbjct: 68 HTDIPEPDFEAYRSNSSKQANVSRDKFDAKRKVYSYTLVGGASAATVYMGKEIVQDLVGY 127
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+ + A+A E+ LN +P G+S+ W+G PLF+RHRT+ EI EQ ++ LRDPQ
Sbjct: 128 LDINDAARALAITEIKLNDVPVGKSLLTTWKGMPLFVRHRTEAEIKAEQAVDLLSLRDPQ 187
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTNM 178
DSDR P W++++G+CTHLGC+P+ + G + GG YCPCHGSHYD+SGRIRKGPAP N+
Sbjct: 188 HDSDRSLTPEWMILVGVCTHLGCIPLQDQGSFAGGMYCPCHGSHYDSSGRIRKGPAPLNL 247
Query: 179 EVPPYQFGDEGILI 192
V P++ E +++
Sbjct: 248 TVAPHKIKGEYLIV 261
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 184 QFGDEGILIRMLAHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGM 239
+ G L R H+DI PDF YR + N + + + +RK ++Y + GG+S +
Sbjct: 55 RIGAVSCLARRNYHTDIPEPDFEAYRSNSSKQANVSRDKFDAKRKVYSYTLVGGASAATV 114
Query: 240 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
K +V + + + A+A E+ LN +P G+S+ W+G PLF+RHR
Sbjct: 115 YMGKEIVQDLVGYLDINDAARALAITEIKLNDVPVGKSLLTTWKGMPLFVRHR 167
>gi|359408736|ref|ZP_09201204.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [SAR116
cluster alpha proteobacterium HIMB100]
gi|356675489|gb|EHI47842.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [SAR116
cluster alpha proteobacterium HIMB100]
Length = 184
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 121/174 (69%), Gaps = 5/174 (2%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
K E ++K+ I S +G V A + I M+ +AD LA+A+IEVD++ I EG
Sbjct: 8 KAAPEAEQKSRRDFIVVASYAMGAVGAGAFAWPLIDQMNPAADTLALASIEVDVSKIAEG 67
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGC 142
QS+T KWRGKP+FIRHRT+ EID + + +RDPQ D DRV+ P +LV++G+CTHLGC
Sbjct: 68 QSITLKWRGKPVFIRHRTKAEIDEAKVADALDMRDPQTDGDRVQKPEYLVVLGVCTHLGC 127
Query: 143 VPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
VP+ G++ G++CPCHGSHYD+SGRIRKGPAPTN+EVPPY F + ++
Sbjct: 128 VPLGQKVGEVRGEYDGWFCPCHGSHYDSSGRIRKGPAPTNLEVPPYAFLSDDVI 181
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
K E ++K+ I S +G V A + I M+ +AD LA+A+IEVD++ I EG
Sbjct: 8 KAAPEAEQKSRRDFIVVASYAMGAVGAGAFAWPLIDQMNPAADTLALASIEVDVSKIAEG 67
Query: 276 QSVTFKWRGKPLFIRHR 292
QS+T KWRGKP+FIRHR
Sbjct: 68 QSITLKWRGKPVFIRHR 84
>gi|159463104|ref|XP_001689782.1| rieske iron-sulfur protein of mitochondrial ubiquinol-cytochrome c
reductase [Chlamydomonas reinhardtii]
gi|27525857|emb|CAC86460.2| ubiquinol-cytochrome c reductase [Chlamydomonas reinhardtii]
gi|158283770|gb|EDP09520.1| rieske iron-sulfur protein of mitochondrial ubiquinol-cytochrome c
reductase [Chlamydomonas reinhardtii]
Length = 262
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 117/160 (73%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 96 TEGRPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITV 155
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
KWRGKP+FIRHRT EI +S+LRDPQ D DR +P +LV++GICTHLGCVPI+
Sbjct: 156 KWRGKPVFIRHRTDAEIAQSAEVALSELRDPQKDVDRAINPKYLVVVGICTHLGCVPISG 215
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
AG++ G++CPCHGSHYD SGRIR+GPAP N+EVP Y+F +
Sbjct: 216 AGNYQGWFCPCHGSHYDISGRIREGPAPYNLEVPEYRFTE 255
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 96 TEGRPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITV 155
Query: 281 KWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 156 KWRGKPVFIRHR 167
>gi|402820615|ref|ZP_10870182.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium IMCC14465]
gi|402511358|gb|EJW21620.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium IMCC14465]
Length = 186
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+AF ++ G + +G A ++ I M+ A + A+A+IEVDL+ + GQS+T
Sbjct: 22 EPNRRAFLHLTTGAFAAIG---AANIAWPLIDQMNPDASMRALASIEVDLDAVEVGQSLT 78
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
WRGKP+FIR RTQ+EI +N ++ L DP+AD+ R ++P WLV++G+CTHLGCVP+
Sbjct: 79 ITWRGKPVFIRRRTQEEIRDAENVSLDALPDPEADNSRAENPEWLVMVGVCTHLGCVPLG 138
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
AG++ G++CPCHGSHYD SGRIRKGPAP N+E+PPYQF
Sbjct: 139 QAGEFNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQF 177
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+AF ++ G + +G A ++ I M+ A + A+A+IEVDL+ + GQS+T
Sbjct: 22 EPNRRAFLHLTTGAFAAIG---AANIAWPLIDQMNPDASMRALASIEVDLDAVEVGQSLT 78
Query: 280 FKWRGKPLFIRHR 292
WRGKP+FIR R
Sbjct: 79 ITWRGKPVFIRRR 91
>gi|288962012|ref|YP_003452322.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Azospirillum
sp. B510]
gi|288914292|dbj|BAI75778.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Azospirillum
sp. B510]
Length = 189
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 119/173 (68%), Gaps = 9/173 (5%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E R+ F Y+ G VG+V A S FI S++ +AD LA+A+I+VDL + GQ
Sbjct: 17 GGEGGSRRDFLYLATG---AVGVVGAASAAWPFIDSLNPAADTLALASIDVDLAPVAVGQ 73
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCV 143
++T WRGKP+F+RHRT +EI++ + N+ LRDP AD RVK P WL++IGICTHLGCV
Sbjct: 74 AITVTWRGKPVFVRHRTAEEIESAKTVNLGDLRDPVADDARVKKPEWLIVIGICTHLGCV 133
Query: 144 PIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGI 190
P+ GD+GG++CPCHGSHYD +GRIRKGPAP N+ +P Y F GD I
Sbjct: 134 PLGQKVTDPRGDYGGWFCPCHGSHYDTAGRIRKGPAPANLVLPTYAFTGDAKI 186
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E R+ F Y+ G VG+V A S FI S++ +AD LA+A+I+VDL + GQ
Sbjct: 17 GGEGGSRRDFLYLATG---AVGVVGAASAAWPFIDSLNPAADTLALASIDVDLAPVAVGQ 73
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 74 AITVTWRGKPVFVRHR 89
>gi|77799158|gb|ABB03722.1| putative mitochondrial Rieske protein [Sorghum bicolor]
Length = 143
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 111/138 (80%)
Query: 55 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
+F+ SMSAS DVLA+A++EVDL+ I G +VT KWRGKP+FIR RT +I + +++
Sbjct: 4 EFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTDDDIKLANSVDVAS 63
Query: 115 LRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPA 174
LR P+ D++RVK+P WLV+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPA
Sbjct: 64 LRHPEQDAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPA 123
Query: 175 PTNMEVPPYQFGDEGILI 192
P N+EVP Y F ++ L+
Sbjct: 124 PFNLEVPTYSFLEDNKLL 141
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F+ SMSAS DVLA+A++EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 4 EFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRR 48
>gi|74272715|gb|ABA01153.1| mitochondrial ubiquinol-cytochrome c oxidoreductase [Chlamydomonas
incerta]
Length = 211
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 117/160 (73%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 45 TEGRPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITV 104
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
KWRGKP+FIRHRT EI +S+LRDPQ D DR +P +LV++GICTHLGCVPI+
Sbjct: 105 KWRGKPVFIRHRTDAEIAQSAEVALSELRDPQKDVDRAINPKYLVVVGICTHLGCVPISG 164
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
AG++ G++CPCHGSHYD SGRIR+GPAP N+EVP Y+F +
Sbjct: 165 AGNYQGWFCPCHGSHYDISGRIREGPAPYNLEVPEYRFTE 204
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T+ + F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T
Sbjct: 45 TEGRPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITV 104
Query: 281 KWRGKPLFIRHR 292
KWRGKP+FIRHR
Sbjct: 105 KWRGKPVFIRHR 116
>gi|1418674|emb|CAA62907.1| ubiquinol--cytochrome c oxidoreductase [Chlamydomonas reinhardtii]
Length = 261
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 115/157 (73%)
Query: 31 KAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWR 90
+ F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T KWR
Sbjct: 98 RPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITVKWR 157
Query: 91 GKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGD 150
GKP+FIRHRT EI +S+LRDPQ D DR +P +LV++GICTHLGCVPI+ AG+
Sbjct: 158 GKPVFIRHRTDAEIAQSAEVALSELRDPQKDVDRAINPKYLVVVGICTHLGCVPISGAGN 217
Query: 151 WGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
+ G++CPCHGSHYD SGRIR+GPAP N+EVP Y+F +
Sbjct: 218 YQGWFCPCHGSHYDISGRIREGPAPYNLEVPEYRFTE 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%)
Query: 224 KAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWR 283
+ F Y + G + A+ V + + S+SA+AD +A++++EVDL+ + EG ++T KWR
Sbjct: 98 RPFAYFVQTGGRFLYASAARLAVLKIVMSLSAAADTMALSSLEVDLSGVEEGTTITVKWR 157
Query: 284 GKPLFIRHR 292
GKP+FIRHR
Sbjct: 158 GKPVFIRHR 166
>gi|290995600|ref|XP_002680371.1| ubiquinol-cytochrome c reductase iron-sulfur subunit mitochondrial
precursor [Naegleria gruberi]
gi|284093991|gb|EFC47627.1| ubiquinol-cytochrome c reductase iron-sulfur subunit mitochondrial
precursor [Naegleria gruberi]
Length = 312
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 124/181 (68%), Gaps = 8/181 (4%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA 70
+ ++Y ++ + DK Q F Y +A S V + V +F+ S SA+ADVLA++
Sbjct: 137 NINEYLKEGDYDKRQ-------FAYFVANSSRFVVAAGLRLAVLRFLYSWSAAADVLAVS 189
Query: 71 TIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSW 130
IEVD++ +P+G+++T WRGKP+FI+HRT+ E + T++S L+DPQADSDR K+ W
Sbjct: 190 KIEVDISNVPKGKTITVTWRGKPVFIKHRTEDETKSLAETDLSTLKDPQADSDRTKNDEW 249
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGI 190
VI+ ICTHLGCVP+ +AG ++CPCHGSHYDASGRI KGPAP NMEVP + D I
Sbjct: 250 TVILAICTHLGCVPVTDAGVMNAFFCPCHGSHYDASGRIVKGPAPLNMEVPKHSL-DGSI 308
Query: 191 L 191
L
Sbjct: 309 L 309
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 7/89 (7%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA 263
+ ++Y ++ + DK Q F Y +A S V + V +F+ S SA+ADVLA++
Sbjct: 137 NINEYLKEGDYDKRQ-------FAYFVANSSRFVVAAGLRLAVLRFLYSWSAAADVLAVS 189
Query: 264 TIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IEVD++ +P+G+++T WRGKP+FI+HR
Sbjct: 190 KIEVDISNVPKGKTITVTWRGKPVFIKHR 218
>gi|323337891|gb|EGA79130.1| Rip1p [Saccharomyces cerevisiae Vin13]
Length = 134
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 81/133 (60%), Positives = 107/133 (80%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+A+ADVLAM +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ
Sbjct: 1 MTATADVLAMXKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQ 60
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGR RKGPAP N+E
Sbjct: 61 TDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRXRKGPAPLNLE 120
Query: 180 VPPYQFGDEGILI 192
+P Y+F + +++
Sbjct: 121 IPAYEFDGDKVIV 133
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+A+ADVLAM +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 1 MTATADVLAMXKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 40
>gi|374293977|ref|YP_005041000.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit [Azospirillum
lipoferum 4B]
gi|357427380|emb|CBS90324.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit [Azospirillum
lipoferum 4B]
Length = 189
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 117/171 (68%), Gaps = 9/171 (5%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
E R+ F Y+ G VG+V A S FI S++ +AD LA+A+I+VDL + GQ++
Sbjct: 19 EGGSRRDFLYLATG---AVGVVGAASAAWPFIDSLNPAADTLALASIDVDLAPVAAGQAI 75
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPI 145
T WRGKP+F+RHRT +EI+ + N+ LRDP AD RVK P WL++IGICTHLGCVP+
Sbjct: 76 TVTWRGKPVFVRHRTAEEIEAAKQVNLGDLRDPAADDARVKKPEWLIVIGICTHLGCVPL 135
Query: 146 ANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGI 190
G++GG++CPCHGSHYD +GRIRKGPAP N+ +P Y F GD I
Sbjct: 136 GQKVTDPRGEYGGWFCPCHGSHYDTAGRIRKGPAPANLVLPTYAFTGDTKI 186
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
E R+ F Y+ G VG+V A S FI S++ +AD LA+A+I+VDL + GQ++
Sbjct: 19 EGGSRRDFLYLATG---AVGVVGAASAAWPFIDSLNPAADTLALASIDVDLAPVAAGQAI 75
Query: 279 TFKWRGKPLFIRHR 292
T WRGKP+F+RHR
Sbjct: 76 TVTWRGKPVFVRHR 89
>gi|428180836|gb|EKX49702.1| hypothetical protein GUITHDRAFT_67785 [Guillardia theta CCMP2712]
Length = 192
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 17 RDRNPDKGQ---EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIE 73
+D P++G+ + R+AF Y + G + A+ V +F+ M+ASADVLA+A+IE
Sbjct: 10 KDALPNQGRLQPGDPSRRAFAYFMMGTARFFYASAARLAVLKFVHYMNASADVLALASIE 69
Query: 74 VDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVI 133
V ++ IP G + KWRGKP+FI+ RTQ+E+D + LRDPQ+D R L++
Sbjct: 70 VPVDGIPAGGCIVVKWRGKPVFIKKRTQEELDDINAVDWKSLRDPQSDKARRIKEEVLIV 129
Query: 134 IGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
+G+CTHLGCVPI+NAGD+ GG++CPCHGSHYDAS RIRKGPAP N+EVPPY+F D
Sbjct: 130 LGVCTHLGCVPISNAGDFKGGWFCPCHGSHYDASARIRKGPAPLNLEVPPYEFID 184
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 210 RDRNPDKGQ---EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIE 266
+D P++G+ + R+AF Y + G + A+ V +F+ M+ASADVLA+A+IE
Sbjct: 10 KDALPNQGRLQPGDPSRRAFAYFMMGTARFFYASAARLAVLKFVHYMNASADVLALASIE 69
Query: 267 VDLNLIPEGQSVTFKWRGKPLFIRHR 292
V ++ IP G + KWRGKP+FI+ R
Sbjct: 70 VPVDGIPAGGCIVVKWRGKPVFIKKR 95
>gi|83591704|ref|YP_425456.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum ATCC 11170]
gi|386348390|ref|YP_006046638.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum F11]
gi|83574618|gb|ABC21169.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum ATCC 11170]
gi|346716826|gb|AEO46841.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum F11]
Length = 183
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 119/174 (68%), Gaps = 9/174 (5%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCV 143
++T WRGKP+F+RHRTQKEID + + + LRDPQ D RV+ WLV++G+CTHLGC+
Sbjct: 68 AITVTWRGKPVFVRHRTQKEIDEARAVDPATLRDPQTDEARVQQAQWLVMVGVCTHLGCI 127
Query: 144 PIAN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
P+ GD+ G++CPCHGSHYD++GRIRKGPAP N+ VPPY F D+ ++
Sbjct: 128 PLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVL 181
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 68 AITVTWRGKPVFVRHR 83
>gi|154252689|ref|YP_001413513.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Parvibaculum
lavamentivorans DS-1]
gi|154156639|gb|ABS63856.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Parvibaculum
lavamentivorans DS-1]
Length = 179
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 115/166 (69%), Gaps = 10/166 (6%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VG A V I M+ A VLA+A+IEVD++ IP GQ T
Sbjct: 8 EPTRRDFLYVATGSLAAVG---AAFTVWPLIDQMNPDASVLALASIEVDISNIPVGQETT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK-------DPSWLVIIGICTH 139
FKWRGKP+F+RHRT+ EI ++ +++ L DPQ D++R+ D WLV+IGICTH
Sbjct: 65 FKWRGKPVFVRHRTEAEIAAAESVDVATLPDPQTDAERLVAGPNGEVDKQWLVVIGICTH 124
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+A G++ GY+CPCHGS YD SGRIRKGPAPTN+EVPPY F
Sbjct: 125 LGCVPLAYRGEYDGYFCPCHGSVYDTSGRIRKGPAPTNLEVPPYAF 170
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VG A V I M+ A VLA+A+IEVD++ IP GQ T
Sbjct: 8 EPTRRDFLYVATGSLAAVG---AAFTVWPLIDQMNPDASVLALASIEVDISNIPVGQETT 64
Query: 280 FKWRGKPLFIRHR 292
FKWRGKP+F+RHR
Sbjct: 65 FKWRGKPVFVRHR 77
>gi|168036442|ref|XP_001770716.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678077|gb|EDQ64540.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 216
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 18 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 77
DR+P Q + ++AF+Y I + + + I SMSAS DVLAMA++E+D++
Sbjct: 43 DRHP---QGDPSKRAFSYFILTIGRCMLAAGLRLFACKVILSMSASKDVLAMASLEMDVS 99
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGIC 137
I G +VT KWRGKP+F+R+RT+ +I + ++S+LRDP+ D R +P++L+++G+C
Sbjct: 100 SIAAGNTVTVKWRGKPVFVRNRTEADIKLANSVSLSELRDPETDEARATNPTYLIVVGVC 159
Query: 138 THLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
THLGCVP+ AGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y +
Sbjct: 160 THLGCVPLPGAGDYGGWFCPCHGSHYDISGRIRKGPAPRNLEVPKYAW 207
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 211 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 270
DR+P Q + ++AF+Y I + + + I SMSAS DVLAMA++E+D++
Sbjct: 43 DRHP---QGDPSKRAFSYFILTIGRCMLAAGLRLFACKVILSMSASKDVLAMASLEMDVS 99
Query: 271 LIPEGQSVTFKWRGKPLFIRHR 292
I G +VT KWRGKP+F+R+R
Sbjct: 100 SIAAGNTVTVKWRGKPVFVRNR 121
>gi|83313187|ref|YP_423451.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Magnetospirillum magneticum AMB-1]
gi|82948028|dbj|BAE52892.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit
[Magnetospirillum magneticum AMB-1]
Length = 184
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 114/171 (66%), Gaps = 9/171 (5%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
P +T+R Y AG VG + + F+ SM+ +AD LA++T +VD++ I
Sbjct: 9 QPSSVDGQTRRDFLLYATAG----VGAIGTGLALWPFVHSMNPAADTLALSTTDVDISAI 64
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
GQSVT WRGKP+FIRHR EID ++ LR+PQAD+DR K P WL++IG+CTH
Sbjct: 65 KPGQSVTVVWRGKPVFIRHREPAEIDEAGKVALADLREPQADADRAKKPEWLILIGVCTH 124
Query: 140 LGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+ G++GG++CPCHGSHYD SGRIRKGPAP N+ VPPYQF
Sbjct: 125 LGCVPLGQKPADPRGEFGGWFCPCHGSHYDTSGRIRKGPAPANLPVPPYQF 175
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
P +T+R Y AG VG + + F+ SM+ +AD LA++T +VD++ I
Sbjct: 9 QPSSVDGQTRRDFLLYATAG----VGAIGTGLALWPFVHSMNPAADTLALSTTDVDISAI 64
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
GQSVT WRGKP+FIRHR
Sbjct: 65 KPGQSVTVVWRGKPVFIRHR 84
>gi|427431238|ref|ZP_18920818.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit
[Caenispirillum salinarum AK4]
gi|425877890|gb|EKV26615.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit
[Caenispirillum salinarum AK4]
Length = 183
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 85/143 (59%), Positives = 110/143 (76%), Gaps = 6/143 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI SM+ +ADVLA+A+ EVDL+ I EGQ++T WRGKP+F+RHRT +EI+ ++S+L
Sbjct: 40 FIHSMNPAADVLALASTEVDLSPIEEGQAITVTWRGKPVFVRHRTAEEIEMANAVDVSEL 99
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIAN-----AGDWGGYYCPCHGSHYDASGRIR 170
RDPQ D +RV+ P WLV +GICTHLGCVP+ G+WGG++CPCHGSHYD SGRIR
Sbjct: 100 RDPQTDEERVQKPEWLVAVGICTHLGCVPLGQKPGEPKGEWGGWFCPCHGSHYDTSGRIR 159
Query: 171 KGPAPTNMEVPPYQF-GDEGILI 192
KGPAP N+ VP Y+F D+ I+I
Sbjct: 160 KGPAPLNLPVPGYEFIEDQRIVI 182
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 37/44 (84%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI SM+ +ADVLA+A+ EVDL+ I EGQ++T WRGKP+F+RHR
Sbjct: 40 FIHSMNPAADVLALASTEVDLSPIEEGQAITVTWRGKPVFVRHR 83
>gi|67845230|emb|CAF03601.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Polytomella
sp. Pringsheim 198.80]
Length = 253
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 120/165 (72%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T+ + F Y++ G V A+ + + + ++SA+AD +A++++EVDL+ I EG +VT
Sbjct: 87 TEGRPFAYLVLTGGRFVYASAARLAIIKVLMTLSAAADTMALSSLEVDLSTIEEGSTVTV 146
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
KWRGKP+FIR+RT+ EI +++ ++D Q D DR +P +LVIIGICTHLGCVPIA
Sbjct: 147 KWRGKPVFIRYRTEAEIARAAADDVASMKDIQKDVDRTINPKYLVIIGICTHLGCVPIAG 206
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
AG++ G++CPCHGSHYD SGRIR+GPAP N+EVP Y++ E +I
Sbjct: 207 AGNYDGWFCPCHGSHYDISGRIREGPAPFNLEVPQYRYTAEQKII 251
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T+ + F Y++ G V A+ + + + ++SA+AD +A++++EVDL+ I EG +VT
Sbjct: 87 TEGRPFAYLVLTGGRFVYASAARLAIIKVLMTLSAAADTMALSSLEVDLSTIEEGSTVTV 146
Query: 281 KWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 147 KWRGKPVFIRYR 158
>gi|393910698|gb|EFO20469.2| hypothetical protein LOAG_08023 [Loa loa]
Length = 253
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AHSD+R PD S R NP K T+ R +I G + ++ +V
Sbjct: 56 FAHSDVRFPDISDQRGITNPTKAASSTENIRRSVRQGIIFGVGGAIYLMMTTKLVQTVAY 115
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+ AD +A+ T +++L+ + EGQ F WRGKPLF++HRT++EI+ +N +S+LRDP
Sbjct: 116 FKNMPADQVALGTTQINLDEVHEGQCKVFNWRGKPLFVKHRTEEEIEEARNVKLSELRDP 175
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+ DS RVK P WL++I IC+HLGCVPI G++ + CPCH S +D SGRIR GPAP N+
Sbjct: 176 EEDSARVKRPEWLILIAICSHLGCVPIHGKGEYDAWLCPCHSSSFDKSGRIRSGPAPNNL 235
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F D+ ++
Sbjct: 236 EVPPYKFYDDHTVV 249
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 180 VPPYQFGDEGILIRMLAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSV 236
+P D + I AHSD+R PD S R NP K T+ R +I G
Sbjct: 41 LPVKPLCDLSLPICRFAHSDVRFPDISDQRGITNPTKAASSTENIRRSVRQGIIFGVGGA 100
Query: 237 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ ++ +V + AD +A+ T +++L+ + EGQ F WRGKPLF++HR
Sbjct: 101 IYLMMTTKLVQTVAYFKNMPADQVALGTTQINLDEVHEGQCKVFNWRGKPLFVKHR 156
>gi|312082820|ref|XP_003143603.1| hypothetical protein LOAG_08023 [Loa loa]
Length = 246
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
AHSD+R PD S R NP K T+ R +I G + ++ +V
Sbjct: 49 FAHSDVRFPDISDQRGITNPTKAASSTENIRRSVRQGIIFGVGGAIYLMMTTKLVQTVAY 108
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
+ AD +A+ T +++L+ + EGQ F WRGKPLF++HRT++EI+ +N +S+LRDP
Sbjct: 109 FKNMPADQVALGTTQINLDEVHEGQCKVFNWRGKPLFVKHRTEEEIEEARNVKLSELRDP 168
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+ DS RVK P WL++I IC+HLGCVPI G++ + CPCH S +D SGRIR GPAP N+
Sbjct: 169 EEDSARVKRPEWLILIAICSHLGCVPIHGKGEYDAWLCPCHSSSFDKSGRIRSGPAPNNL 228
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F D+ ++
Sbjct: 229 EVPPYKFYDDHTVV 242
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 3/116 (2%)
Query: 180 VPPYQFGDEGILIRMLAHSDIRTPDFSKYRRDRNPDKGQEETQ---RKAFTYMIAGGSSV 236
+P D + I AHSD+R PD S R NP K T+ R +I G
Sbjct: 34 LPVKPLCDLSLPICRFAHSDVRFPDISDQRGITNPTKAASSTENIRRSVRQGIIFGVGGA 93
Query: 237 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ ++ +V + AD +A+ T +++L+ + EGQ F WRGKPLF++HR
Sbjct: 94 IYLMMTTKLVQTVAYFKNMPADQVALGTTQINLDEVHEGQCKVFNWRGKPLFVKHR 149
>gi|381167714|ref|ZP_09876920.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Phaeospirillum molischianum
DSM 120]
gi|380683087|emb|CCG41732.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Phaeospirillum molischianum
DSM 120]
Length = 184
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 119/174 (68%), Gaps = 9/174 (5%)
Query: 17 RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 76
++ P +T+R + +S VG+V + F+ SM+ +AD LA++T +VDL
Sbjct: 6 KNAQPSAADGQTRRD----FLLQAASTVGVVGTGIALWPFVHSMNPAADTLALSTTDVDL 61
Query: 77 NLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGI 136
+ I GQ++T WRG P+F+R RT +EI + Q N+S+LRDPQ+D+ RVK+P WL+++GI
Sbjct: 62 SAIKPGQAITVVWRGAPVFVRSRTAEEIASAQAVNLSELRDPQSDAIRVKNPQWLIVVGI 121
Query: 137 CTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CTHLGCVP+ G+WGG++CPCHGS YD SGRIRKGPAP N+ VP YQF
Sbjct: 122 CTHLGCVPLGQKPTDPRGEWGGWFCPCHGSQYDTSGRIRKGPAPKNLAVPAYQF 175
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 210 RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 269
++ P +T+R + +S VG+V + F+ SM+ +AD LA++T +VDL
Sbjct: 6 KNAQPSAADGQTRRD----FLLQAASTVGVVGTGIALWPFVHSMNPAADTLALSTTDVDL 61
Query: 270 NLIPEGQSVTFKWRGKPLFIRHR 292
+ I GQ++T WRG P+F+R R
Sbjct: 62 SAIKPGQAITVVWRGAPVFVRSR 84
>gi|182677155|ref|YP_001831301.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182633038|gb|ACB93812.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 172
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/156 (55%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F ++ G +G+V A SV+ I M+ A LA AT EVD+ I EGQ VT KW
Sbjct: 11 RRDFLFIATGA---MGVVAAGSVLWPLIDQMNPDASTLAAATTEVDIGNIAEGQIVTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+F+RHRT+KEI + +S+LRDPQ D RV+ P WLV+IGICTHLGCVPI + G
Sbjct: 68 RGKPVFVRHRTKKEISDAEAVPVSELRDPQTDQSRVQKPEWLVVIGICTHLGCVPIGHEG 127
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ G++CPCHGS YD SGRIR+GPAP N+ VP Y+F
Sbjct: 128 QYEGWFCPCHGSVYDTSGRIRQGPAPLNLAVPAYRF 163
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F ++ G +G+V A SV+ I M+ A LA AT EVD+ I EGQ VT KW
Sbjct: 11 RRDFLFIATGA---MGVVAAGSVLWPLIDQMNPDASTLAAATTEVDIGNIAEGQIVTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+F+RHR
Sbjct: 68 RGKPVFVRHR 77
>gi|157139501|gb|ABV24350.1| mitochondrial ubiquinol-cytochrome c oxidoreductase [Dunaliella
salina]
Length = 151
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 112/151 (74%)
Query: 34 TYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKP 93
Y + G + + V + + S+SA+AD LAM+++EVDL+ I EG ++T KWRGKP
Sbjct: 1 AYFVQTGGRFLYASAIRLAVLKAVVSLSAAADTLAMSSLEVDLSGIEEGSTITVKWRGKP 60
Query: 94 LFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGG 153
+FI+HRT+++I N N+ LRDPQ DS+R DP +L+++G+CTHLGCVPIA AG++ G
Sbjct: 61 VFIKHRTEEDIAAANNVNLEGLRDPQPDSERAVDPKYLIVVGVCTHLGCVPIAGAGNYQG 120
Query: 154 YYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
++CPCHGSHYD SGR R+GPAP N+EVP Y+
Sbjct: 121 WFCPCHGSHYDGSGRTREGPAPYNLEVPEYR 151
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 227 TYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKP 286
Y + G + + V + + S+SA+AD LAM+++EVDL+ I EG ++T KWRGKP
Sbjct: 1 AYFVQTGGRFLYASAIRLAVLKAVVSLSAAADTLAMSSLEVDLSGIEEGSTITVKWRGKP 60
Query: 287 LFIRHR 292
+FI+HR
Sbjct: 61 VFIKHR 66
>gi|136710|sp|P23136.2|UCRI_RHORU RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|46384|emb|CAA39058.1| Rieske FeS protein [Rhodospirillum rubrum]
Length = 183
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 118/174 (67%), Gaps = 9/174 (5%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCV 143
++T WRGKP+F+RHRTQKEI + + + LRDPQ D RV+ WLV++G+CTHLGC+
Sbjct: 68 AITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCI 127
Query: 144 PIAN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
P+ GD+ G++CPCHGSHYD++GRIRKGPAP N+ VPPY F D+ ++
Sbjct: 128 PLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVL 181
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 68 AITVTWRGKPVFVRHR 83
>gi|296536750|ref|ZP_06898806.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseomonas
cervicalis ATCC 49957]
gi|296262917|gb|EFH09486.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseomonas
cervicalis ATCC 49957]
Length = 194
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 119/169 (70%), Gaps = 9/169 (5%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D G E T+R F ++AG + VG+ ++V FI SM+ + DVLA+A+ +V L+ I E
Sbjct: 21 DHGPEGTKRD-FLKLVAGSFAAVGV---GAIVWPFIHSMNPAKDVLALASTDVPLSHIAE 76
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLG 141
GQ+VT WRGKP+F+RHRT EI ++ + +LRDPQ DS RV+ WLV++G+CTHLG
Sbjct: 77 GQAVTVMWRGKPVFVRHRTANEIQEAESVPLGELRDPQPDSARVQRKPWLVVLGVCTHLG 136
Query: 142 CVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CVP+ GD+GG++CPCHGSHYD SGRIR+GPAPTN+ VP Y F
Sbjct: 137 CVPLGQKPTDARGDFGGWFCPCHGSHYDTSGRIRRGPAPTNLAVPEYNF 185
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D G E T+R F ++AG + VG+ ++V FI SM+ + DVLA+A+ +V L+ I E
Sbjct: 21 DHGPEGTKRD-FLKLVAGSFAAVGV---GAIVWPFIHSMNPAKDVLALASTDVPLSHIAE 76
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT WRGKP+F+RHR
Sbjct: 77 GQAVTVMWRGKPVFVRHR 94
>gi|23016086|ref|ZP_00055846.1| COG0723: Rieske Fe-S protein [Magnetospirillum magnetotacticum
MS-1]
Length = 184
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 115/171 (67%), Gaps = 9/171 (5%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
P +T+R Y AG VG + + F+ SM+ +AD LA++T +VD++ I
Sbjct: 9 QPSSVDGQTRRDFLLYATAG----VGAIGTGLALWPFVHSMNPAADTLALSTTDVDISAI 64
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
GQ+VT WRGKP+F+R+R +EI + ++ LRDPQ DSDRVK P WL+++G+CTH
Sbjct: 65 KPGQAVTVVWRGKPVFVRNRLPEEISAAEQAAVADLRDPQKDSDRVKKPEWLILVGVCTH 124
Query: 140 LGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+ G++GG++CPCHGSHYD SGRIRKGPAP N+ VPPYQF
Sbjct: 125 LGCVPLGQKPADPRGEFGGWFCPCHGSHYDTSGRIRKGPAPANLPVPPYQF 175
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
P +T+R Y AG VG + + F+ SM+ +AD LA++T +VD++ I
Sbjct: 9 QPSSVDGQTRRDFLLYATAG----VGAIGTGLALWPFVHSMNPAADTLALSTTDVDISAI 64
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
GQ+VT WRGKP+F+R+R
Sbjct: 65 KPGQAVTVVWRGKPVFVRNR 84
>gi|389874390|ref|YP_006373746.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Tistrella
mobilis KA081020-065]
gi|388531570|gb|AFK56764.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Tistrella
mobilis KA081020-065]
Length = 181
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 79/136 (58%), Positives = 106/136 (77%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I SM+ +ADVLA+++ EV+++ I GQ+VT WRGKP+FIRHRT+KEI+ + N++ L
Sbjct: 43 LIDSMNPAADVLALSSTEVNISQIEAGQAVTITWRGKPVFIRHRTEKEIEEARAVNVADL 102
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DPQ D+DRV+ P WLV++G+CTHLGCVP+ GD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 103 PDPQPDADRVEKPEWLVVVGVCTHLGCVPLGYQGDYDGWFCPCHGSHYDTSGRIRKGPAP 162
Query: 176 TNMEVPPYQFGDEGIL 191
N+ VP Y F D+ +
Sbjct: 163 ANLAVPEYVFVDDNTI 178
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 35/44 (79%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I SM+ +ADVLA+++ EV+++ I GQ+VT WRGKP+FIRHR
Sbjct: 43 LIDSMNPAADVLALSSTEVNISQIEAGQAVTITWRGKPVFIRHR 86
>gi|365859133|ref|ZP_09399011.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Acetobacteraceae bacterium AT-5844]
gi|363713032|gb|EHL96691.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Acetobacteraceae bacterium AT-5844]
Length = 191
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 115/161 (71%), Gaps = 8/161 (4%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
++ F ++AG + VG+ ++V FI+SM+ + DVLA+A+ +VDL + EGQ+VT W
Sbjct: 25 KRDFLKLVAGSFAAVGV---GAIVWPFIASMNPAKDVLALASTDVDLTHVAEGQAVTVMW 81
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANA- 148
RGKP+F+RHRT KEI+ Q +S LRDPQ D RV WL+++G+CTHLGCVP+
Sbjct: 82 RGKPVFVRHRTAKEIEEAQAVPLSDLRDPQTDQSRVLREPWLIVVGVCTHLGCVPLGQKS 141
Query: 149 ----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
GD+GG++CPCHGSHYD +GRIR+GPAP N+ VP Y+F
Sbjct: 142 TDPRGDYGGWFCPCHGSHYDTAGRIRRGPAPLNLAVPEYEF 182
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
++ F ++AG + VG+ ++V FI+SM+ + DVLA+A+ +VDL + EGQ+VT W
Sbjct: 25 KRDFLKLVAGSFAAVGV---GAIVWPFIASMNPAKDVLALASTDVDLTHVAEGQAVTVMW 81
Query: 283 RGKPLFIRHR 292
RGKP+F+RHR
Sbjct: 82 RGKPVFVRHR 91
>gi|170591883|ref|XP_001900699.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit family
protein [Brugia malayi]
gi|158591851|gb|EDP30454.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit family
protein [Brugia malayi]
Length = 243
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 9/197 (4%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ------RKAFTYMIAGGSSVVGMVCAKSVVNQ 55
LAHS IR PD + R +P K T+ R+ Y I G + ++ A +V
Sbjct: 46 LAHSCIRFPDINNRRIITDPTKAASSTEDKRRLIRQGVIYGIGGA---IYLMMATKLVQT 102
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ + +D +A+ T ++L+ I EGQ TFKWRGKPLF++HRT+ EI+ +N +S+L
Sbjct: 103 AVHFKNMPSDQVALGTTRINLDEIHEGQCKTFKWRGKPLFVKHRTKAEIEEARNVKLSEL 162
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
RDP+ DS RVK P WL++I +C HLGCVP+ G++ + CPCH S +D SGRIR GP+P
Sbjct: 163 RDPEEDSARVKRPEWLILIAVCPHLGCVPLHGKGEYDAWLCPCHSSLFDKSGRIRSGPSP 222
Query: 176 TNMEVPPYQFGDEGILI 192
+N+EVPPY+F D+ ++
Sbjct: 223 SNLEVPPYKFYDDHTVV 239
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKGQEETQ------RKAFTYMIAGGSSVVGMVCAKSVVNQ 248
LAHS IR PD + R +P K T+ R+ Y I G + ++ A +V
Sbjct: 46 LAHSCIRFPDINNRRIITDPTKAASSTEDKRRLIRQGVIYGIGGA---IYLMMATKLVQT 102
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ + +D +A+ T ++L+ I EGQ TFKWRGKPLF++HR
Sbjct: 103 AVHFKNMPSDQVALGTTRINLDEIHEGQCKTFKWRGKPLFVKHR 146
>gi|148284754|ref|YP_001248844.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Orientia
tsutsugamushi str. Boryong]
gi|146740193|emb|CAM80462.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Orientia
tsutsugamushi str. Boryong]
Length = 230
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 118/166 (71%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D + R+ F + A + +G V S + FI S++ +A+V A++++EVD++ I
Sbjct: 59 DDSNTKVTRRDFMVLTATSMASIGAV---SSLWPFIDSLNPAANVSALSSVEVDIDKIQC 115
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTH 139
GQ++T W+GKP+FI+HRT +EI + N+S+L DP+ D+ RVK WLVIIGICTH
Sbjct: 116 GQAITISWQGKPVFIKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVIIGICTH 175
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGC+PI +G++ G++CPCHGSHYD SGRIRKGPAP N+E+PPYQF
Sbjct: 176 LGCIPIDRSGEYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQF 221
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D + R+ F + A + +G V S + FI S++ +A+V A++++EVD++ I
Sbjct: 59 DDSNTKVTRRDFMVLTATSMASIGAV---SSLWPFIDSLNPAANVSALSSVEVDIDKIQC 115
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ++T W+GKP+FI+HR
Sbjct: 116 GQAITISWQGKPVFIKHR 133
>gi|323139054|ref|ZP_08074113.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylocystis sp. ATCC 49242]
gi|322395714|gb|EFX98256.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylocystis sp. ATCC 49242]
Length = 177
Score = 186 bits (473), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 99/130 (76%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ A LA+A+ EVDL+ IPEGQ VT KWRGKP+F+RHRT +EI +N +S L
Sbjct: 39 LIAQMNPDASTLALASTEVDLSAIPEGQIVTVKWRGKPVFVRHRTAEEIKAAENVELSVL 98
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP+ADS RV+ P WLV+IG+CTHLGC+P G++ G++CPCHGS YD SGRIR GPAP
Sbjct: 99 PDPEADSQRVQKPEWLVVIGVCTHLGCIPTGKEGEFDGWFCPCHGSTYDVSGRIRSGPAP 158
Query: 176 TNMEVPPYQF 185
TN+EVP Y F
Sbjct: 159 TNLEVPKYTF 168
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ A LA+A+ EVDL+ IPEGQ VT KWRGKP+F+RHR
Sbjct: 39 LIAQMNPDASTLALASTEVDLSAIPEGQIVTVKWRGKPVFVRHR 82
>gi|407769688|ref|ZP_11117062.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407287205|gb|EKF12687.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 183
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 119/173 (68%), Gaps = 13/173 (7%)
Query: 18 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 77
D PD+ R+ F + ++ VG+V + F+ SM+ S DVLA+A++EV+L+
Sbjct: 10 DHTPDE-----NRRDFLTL---ATTAVGVVGTGMALWPFVDSMNPSKDVLALASVEVNLS 61
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGIC 137
IP GQ+V WRGKP+FIRHRT++EI+ + ++++L DPQ+D RV+ WL+++G+C
Sbjct: 62 NIPVGQAVKVMWRGKPVFIRHRTEREINEAEEVSLNELVDPQSDEARVQKKEWLIVVGVC 121
Query: 138 THLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
THLGC+P+ A GD+ G+YCPCHGSHYD SGRIRKGPAP N+ VP Y F
Sbjct: 122 THLGCIPMGTATGETRGDYDGWYCPCHGSHYDTSGRIRKGPAPLNLVVPTYTF 174
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 211 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 270
D PD+ R+ F + ++ VG+V + F+ SM+ S DVLA+A++EV+L+
Sbjct: 10 DHTPDE-----NRRDFLTL---ATTAVGVVGTGMALWPFVDSMNPSKDVLALASVEVNLS 61
Query: 271 LIPEGQSVTFKWRGKPLFIRHR 292
IP GQ+V WRGKP+FIRHR
Sbjct: 62 NIPVGQAVKVMWRGKPVFIRHR 83
>gi|407773353|ref|ZP_11120654.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thalassospira profundimaris WP0211]
gi|407283817|gb|EKF09345.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thalassospira profundimaris WP0211]
Length = 183
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 115/166 (69%), Gaps = 8/166 (4%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
Q + R+ F + VG+ CA + F+ SM+ S DVLA+A++EV+L IP GQ+
Sbjct: 12 QPDENRRDFLTLATTAVGAVGVGCA---LLPFVDSMNPSKDVLALASVEVNLANIPVGQA 68
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVP 144
+ WRGKP+FIRHRT++EI+ ++ +++L DPQ D RV+ WLV++G+CTHLGC+P
Sbjct: 69 IKVMWRGKPVFIRHRTEREINEAEDVALNELVDPQTDDARVEKKEWLVVVGVCTHLGCIP 128
Query: 145 IANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ A GD+ G+YCPCHGSHYD SGRIR+GPAP N+ VP Y+F
Sbjct: 129 MGTATGETRGDYDGWYCPCHGSHYDTSGRIRRGPAPLNLVVPEYEF 174
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
Q + R+ F + VG+ CA + F+ SM+ S DVLA+A++EV+L IP GQ+
Sbjct: 12 QPDENRRDFLTLATTAVGAVGVGCA---LLPFVDSMNPSKDVLALASVEVNLANIPVGQA 68
Query: 278 VTFKWRGKPLFIRHR 292
+ WRGKP+FIRHR
Sbjct: 69 IKVMWRGKPVFIRHR 83
>gi|347758428|ref|YP_004865990.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Micavibrio
aeruginosavorus ARL-13]
gi|347590946|gb|AEP09988.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Micavibrio
aeruginosavorus ARL-13]
Length = 185
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 105/144 (72%), Gaps = 6/144 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI SM+ +AD LAMA+ EVDL+ + GQS+T WRG P+FIRHRT +EI+ + ++S L
Sbjct: 42 FIDSMNPAADTLAMASTEVDLSPVEVGQSITVTWRGTPVFIRHRTAEEIEAARAVDVSSL 101
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
RDPQ D DR P WLVI+GICTHLGCVP+ G++GG++CPCHGSHYD SGRIR
Sbjct: 102 RDPQTDEDRATKPEWLVIVGICTHLGCVPLGQKKTDPHGEFGGWFCPCHGSHYDQSGRIR 161
Query: 171 KGPAPTNMEVPPYQFGDEGILIRM 194
KGPAP NM VP Y F + LIR+
Sbjct: 162 KGPAPKNMVVPEYTFLSD-TLIRI 184
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI SM+ +AD LAMA+ EVDL+ + GQS+T WRG P+FIRHR
Sbjct: 42 FIDSMNPAADTLAMASTEVDLSPVEVGQSITVTWRGTPVFIRHR 85
>gi|217979898|ref|YP_002364045.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylocella
silvestris BL2]
gi|217505274|gb|ACK52683.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylocella
silvestris BL2]
Length = 173
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 82/160 (51%), Positives = 111/160 (69%), Gaps = 3/160 (1%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
EE R+ F Y+ ++ VG+V A + V IS MS A LA ++EVD++ I GQ +
Sbjct: 8 EEPTRRDFLYI---ATAAVGIVGAGAAVWPLISQMSPDASTLAAGSVEVDISGIAVGQIL 64
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPI 145
T KWRGKP+F+ HRT +EI + +++L+DP D RV+ P WL++IGICTHLGCVP+
Sbjct: 65 TVKWRGKPIFVSHRTPEEIAAVRAVPLNELKDPATDQSRVQKPEWLIVIGICTHLGCVPL 124
Query: 146 ANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
N G + G++CPCHGS YD SGRIR+GPAP N+ VPPY+F
Sbjct: 125 GNEGPYHGFFCPCHGSVYDPSGRIRQGPAPANLVVPPYKF 164
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
EE R+ F Y+ ++ VG+V A + V IS MS A LA ++EVD++ I GQ +
Sbjct: 8 EEPTRRDFLYI---ATAAVGIVGAGAAVWPLISQMSPDASTLAAGSVEVDISGIAVGQIL 64
Query: 279 TFKWRGKPLFIRHR 292
T KWRGKP+F+ HR
Sbjct: 65 TVKWRGKPIFVSHR 78
>gi|429850956|gb|ELA26181.1| DNA damage-binding protein 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1409
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 119/194 (61%), Gaps = 18/194 (9%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDFSKY KG + +Y + G + AKS V +F+ +MSASADVL
Sbjct: 1223 QIPDFSKYM-----SKGSAQGNH-LISYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 1276
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRTQ EID ++ LRDPQAD DRVK
Sbjct: 1277 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTQAEIDEANKVTVASLRDPQADDDRVKQ 1336
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPC---------HGSHYDASGRIRKGPAPTNM 178
P WL+++G + +A W CP HGSHYD SGRIRKGPAP N+
Sbjct: 1337 PEWLIMLGPLGR-DIWALVSARTW--VVCPSARLVTTAVGHGSHYDISGRIRKGPAPLNL 1393
Query: 179 EVPPYQFGDEGILI 192
E+P Y+F +EG L+
Sbjct: 1394 EIPEYEFPEEGKLV 1407
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDFSKY KG + +Y + G + AKS V +F+ +MSASADVL
Sbjct: 1223 QIPDFSKYM-----SKGSAQGNH-LISYFMVGTMGAITAAGAKSTVQEFLVNMSASADVL 1276
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 1277 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 1308
>gi|157803492|ref|YP_001492041.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
canadensis str. McKiel]
gi|379022692|ref|YP_005299353.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
canadensis str. CA410]
gi|157784755|gb|ABV73256.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
canadensis str. McKiel]
gi|376323630|gb|AFB20871.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
canadensis str. CA410]
Length = 177
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A +VVG CA + I S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAVVGAACA---LLPLIDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D R+K +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAAARAVKMSELIDPETDEARIKAGYDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A +VVG CA + I S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAVVGAACA---LLPLIDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|406707806|ref|YP_006758158.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB59]
gi|406653582|gb|AFS48981.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB59]
Length = 174
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 8/168 (4%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
+T R+ F + + +G V A S+ FI+SM+ D LA+A+ E+DL+ + EGQS+
Sbjct: 4 HKTPRRDFIKL---ATMTLGGVGAASLAIPFITSMNPGKDTLALASTEIDLSPLKEGQSL 60
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPI 145
T WRGKP+FI+HRT +EI +NT+++ L D + D+DRV++ WLV++G+CTHLGCVP+
Sbjct: 61 TVIWRGKPVFIKHRTPQEITEAKNTDLNDLIDIEDDADRVQNDKWLVVLGVCTHLGCVPL 120
Query: 146 AN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
G++GG++CPCHGSHYD SGRIRKGPAP N+ VPPY F +E
Sbjct: 121 GQKTSDVKGEYGGWFCPCHGSHYDTSGRIRKGPAPKNLPVPPYVFLNE 168
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
+T R+ F + + +G V A S+ FI+SM+ D LA+A+ E+DL+ + EGQS+
Sbjct: 4 HKTPRRDFIKL---ATMTLGGVGAASLAIPFITSMNPGKDTLALASTEIDLSPLKEGQSL 60
Query: 279 TFKWRGKPLFIRHR 292
T WRGKP+FI+HR
Sbjct: 61 TVIWRGKPVFIKHR 74
>gi|189183630|ref|YP_001937415.1| cytochrome b6-f complex iron-sulfur subunit [Orientia tsutsugamushi
str. Ikeda]
gi|189180401|dbj|BAG40181.1| cytochrome b6-f complex iron-sulfur subunit [Orientia tsutsugamushi
str. Ikeda]
Length = 221
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D + R+ F + A + +G V S + FI S++ +A+V A++++EVD++ I
Sbjct: 50 DDSNTKVTRRDFMVLTATSMASIGAV---SSLWPFIDSLNPAANVSALSSVEVDIDKIQC 106
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTH 139
GQ++T W+GKP+FI+HRT +EI + N+S+L DP+ D+ RVK WLV+IGICTH
Sbjct: 107 GQAITISWQGKPVFIKHRTDEEIKEARAVNLSELIDPEEDNTRVKSGYDQWLVVIGICTH 166
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGC+P +G++ G++CPCHGSHYD SGRIRKGPAP N+E+PPYQF
Sbjct: 167 LGCIPTDRSGEYNGWFCPCHGSHYDTSGRIRKGPAPKNLEIPPYQF 212
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D + R+ F + A + +G V S + FI S++ +A+V A++++EVD++ I
Sbjct: 50 DDSNTKVTRRDFMVLTATSMASIGAV---SSLWPFIDSLNPAANVSALSSVEVDIDKIQC 106
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ++T W+GKP+FI+HR
Sbjct: 107 GQAITISWQGKPVFIKHR 124
>gi|384260751|ref|YP_005415937.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhodospirillum photometricum DSM 122]
gi|378401851|emb|CCG06967.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhodospirillum photometricum DSM 122]
Length = 185
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 114/166 (68%), Gaps = 9/166 (5%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
++R Y GS+ +G + A I SM+ +ADVLA++T EVDL I GQ++T
Sbjct: 18 SRRDVLVY----GSATLGTLGAALAAWPLIDSMNPAADVLALSTTEVDLTGIAVGQAITV 73
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
W+GKP+FIRHRT+ EI Q + + LRDPQ+D++RV+ P+WLV +GICTHLGC+P+
Sbjct: 74 TWQGKPVFIRHRTEAEIAAAQAVDPTTLRDPQSDAERVQQPAWLVAVGICTHLGCIPLGQ 133
Query: 148 A-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
G++ G++CPCHGSHYD +GR RKGPAP N+ +PPY F D+
Sbjct: 134 KAGDPRGEFDGWFCPCHGSHYDTAGRARKGPAPLNLAIPPYAFLDD 179
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
++R Y GS+ +G + A I SM+ +ADVLA++T EVDL I GQ++T
Sbjct: 18 SRRDVLVY----GSATLGTLGAALAAWPLIDSMNPAADVLALSTTEVDLTGIAVGQAITV 73
Query: 281 KWRGKPLFIRHR 292
W+GKP+FIRHR
Sbjct: 74 TWQGKPVFIRHR 85
>gi|383312308|ref|YP_005365109.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378930968|gb|AFC69477.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 177
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 118/166 (71%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG VC + ++S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVC---TLWPLVNSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG VC + ++S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVC---TLWPLVNSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|402770662|ref|YP_006590199.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Methylocystis
sp. SC2]
gi|401772682|emb|CCJ05548.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Methylocystis
sp. SC2]
Length = 176
Score = 183 bits (465), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 77/134 (57%), Positives = 101/134 (75%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
+V I+ M+ A LA+A+ EVDL+ +PEGQ VT KWRGKP+F+RHRT EI + ++
Sbjct: 34 MVWPLIAQMNPDASTLALASTEVDLSSVPEGQIVTVKWRGKPVFVRHRTAAEIKSAEDVP 93
Query: 112 ISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRK 171
+S L DP+ D+ RV+ P WLV+IG+CTHLGC+P G++ G++CPCHGS YD SGRIR
Sbjct: 94 LSALPDPEPDAKRVQKPEWLVVIGVCTHLGCIPTGKEGEYDGWFCPCHGSVYDLSGRIRS 153
Query: 172 GPAPTNMEVPPYQF 185
GPAPTN+EVPPY F
Sbjct: 154 GPAPTNLEVPPYAF 167
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+V I+ M+ A LA+A+ EVDL+ +PEGQ VT KWRGKP+F+RHR
Sbjct: 34 MVWPLIAQMNPDASTLALASTEVDLSSVPEGQIVTVKWRGKPVFVRHR 81
>gi|294880711|ref|XP_002769113.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239872264|gb|EER01831.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 353
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 114/192 (59%), Gaps = 13/192 (6%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
H D R + DR P F Y G ++G+ + V + + +
Sbjct: 171 GHLDFRHTRLPTWHADRRP-----------FHYFATGMFGLIGLAFLRGTVVKVVHGLWP 219
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNTNISQLRDPQA 120
+ D +A IEVDL I GQ+ KWRGKP+F+R RTQ ID T + ++ LRDP+
Sbjct: 220 ARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRRTQAMIDAATADDAIVNSLRDPER 279
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D DRVK P WLV++G+CTHLGCVP + G +GGY+CPCHGSHYD SGRIR GPAP NME+
Sbjct: 280 DKDRVKKPEWLVMLGVCTHLGCVPYPDQGLYGGYFCPCHGSHYDHSGRIRLGPAPLNMEI 339
Query: 181 PPYQFGDEGILI 192
P Y+F D+ +I
Sbjct: 340 PTYEFIDDDTII 351
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
H D R + DR P F Y G ++G+ + V + + +
Sbjct: 171 GHLDFRHTRLPTWHADRRP-----------FHYFATGMFGLIGLAFLRGTVVKVVHGLWP 219
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ D +A IEVDL I GQ+ KWRGKP+F+R R
Sbjct: 220 ARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRR 256
>gi|294920235|ref|XP_002778583.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239887152|gb|EER10378.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 349
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 114/192 (59%), Gaps = 13/192 (6%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
H D R + DR P F Y G ++G+ + V + + +
Sbjct: 167 GHLDFRHTRLPTWHADRRP-----------FHYFATGMFGLIGLAFLRGTVVKVVHGLWP 215
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNTNISQLRDPQA 120
+ D +A IEVDL I GQ+ KWRGKP+F+R RTQ ID T + ++ LRDP+
Sbjct: 216 ARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRRTQAMIDAATADDAIVNSLRDPER 275
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D DRVK P WLV++G+CTHLGCVP + G +GGY+CPCHGSHYD SGRIR GPAP NME+
Sbjct: 276 DKDRVKKPEWLVMLGVCTHLGCVPYPDQGLYGGYFCPCHGSHYDHSGRIRLGPAPLNMEI 335
Query: 181 PPYQFGDEGILI 192
P Y+F D+ +I
Sbjct: 336 PTYEFIDDDTII 347
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
H D R + DR P F Y G ++G+ + V + + +
Sbjct: 167 GHLDFRHTRLPTWHADRRP-----------FHYFATGMFGLIGLAFLRGTVVKVVHGLWP 215
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ D +A IEVDL I GQ+ KWRGKP+F+R R
Sbjct: 216 ARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRR 252
>gi|15892281|ref|NP_359995.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia conorii
str. Malish 7]
gi|81595588|sp|Q92IR2.1|UCRI_RICCN RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|15619422|gb|AAL02896.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia conorii
str. Malish 7]
Length = 177
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAVC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAVC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|294875577|ref|XP_002767387.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239868950|gb|EER00105.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 318
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G ++G+ + V + + + + D +A IEVDL I GQ+ KW
Sbjct: 152 RRPFHYFATGMFGLIGLAFLRGTVVKVVHGLWPARDAIAAGVIEVDLRGIQPGQNFVVKW 211
Query: 90 RGKPLFIRHRTQKEID--TEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
RGKP+F+R RTQ ID T + ++ LRDP+ D DRVK P WLV++G+CTHLGCVP +
Sbjct: 212 RGKPVFVRRRTQAMIDAATADDAIVNSLRDPERDKDRVKKPEWLVMLGVCTHLGCVPYPD 271
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
G +GGY+CPCHGSHYD SGRIR GPAP NME+P Y+F D+ +I
Sbjct: 272 QGLYGGYFCPCHGSHYDHSGRIRLGPAPLNMEIPTYEFIDDDTII 316
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G ++G+ + V + + + + D +A IEVDL I GQ+ KW
Sbjct: 152 RRPFHYFATGMFGLIGLAFLRGTVVKVVHGLWPARDAIAAGVIEVDLRGIQPGQNFVVKW 211
Query: 283 RGKPLFIRHR 292
RGKP+F+R R
Sbjct: 212 RGKPVFVRRR 221
>gi|124809329|ref|XP_001348547.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Plasmodium falciparum 3D7]
gi|23497443|gb|AAN36986.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Plasmodium falciparum 3D7]
Length = 355
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 118/185 (63%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R N D R++F Y I+ + +S + + + S D++A
Sbjct: 176 PDFREYRLRSGNED-------RRSFMYFISASYFFIMSSIMRSAICKSVHFFWISKDLVA 228
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNTNISQLRDPQADSDRVK 126
T E+D+ + G+ V KWRGKP+F++HRT ++I E + I +RDPQ DSDR
Sbjct: 229 GGTTELDMRTVNPGEHVVIKWRGKPVFVKHRTPEDIQRAKEDDKLIQTMRDPQLDSDRTI 288
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IGICTHLGCVP A G++ GY+CPCHGSHYD SGRIR+GPAP+N+EVPPY+F
Sbjct: 289 KPEWLVNIGICTHLGCVP-AQGGNYSGYFCPCHGSHYDNSGRIRQGPAPSNLEVPPYEFV 347
Query: 187 DEGIL 191
DE +
Sbjct: 348 DENTI 352
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R N D R++F Y I+ + +S + + + S D++A
Sbjct: 176 PDFREYRLRSGNED-------RRSFMYFISASYFFIMSSIMRSAICKSVHFFWISKDLVA 228
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + G+ V KWRGKP+F++HR
Sbjct: 229 GGTTELDMRTVNPGEHVVIKWRGKPVFVKHR 259
>gi|82596094|ref|XP_726120.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Plasmodium
yoelii yoelii 17XNL]
gi|23481393|gb|EAA17685.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, putative
[Plasmodium yoelii yoelii]
Length = 357
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT--EQNTNISQLRDPQADSDRVK 126
T E+D+ + EG+ V KWRGKP+F++HRT ++I E + + +RDPQ DSDR
Sbjct: 231 EGTTELDMRTVGEGEQVVIKWRGKPIFVKHRTPEDIQRAREDDKLVETMRDPQLDSDRTI 290
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGRIR+GPAP N+EVPPY+F
Sbjct: 291 RPEWLVNIGVCTHLGCIP-APGGNYNGYFCPCHGSHYDNSGRIRQGPAPANLEVPPYEFV 349
Query: 187 DEGIL 191
DE +
Sbjct: 350 DENTI 354
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + EG+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVGEGEQVVIKWRGKPIFVKHR 261
>gi|157828236|ref|YP_001494478.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165932939|ref|YP_001649728.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Iowa]
gi|378721038|ref|YP_005285925.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Colombia]
gi|378722392|ref|YP_005287278.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Arizona]
gi|378723749|ref|YP_005288633.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hauke]
gi|379016698|ref|YP_005292933.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Brazil]
gi|379017538|ref|YP_005293773.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hino]
gi|157800717|gb|ABV75970.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165908026|gb|ABY72322.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Iowa]
gi|376325222|gb|AFB22462.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Brazil]
gi|376326062|gb|AFB23301.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Colombia]
gi|376327416|gb|AFB24654.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Arizona]
gi|376330104|gb|AFB27340.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hino]
gi|376332764|gb|AFB29997.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hauke]
Length = 177
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTSDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|294085754|ref|YP_003552514.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292665329|gb|ADE40430.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 182
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 101/141 (71%), Gaps = 5/141 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ +AD LA+A EVD++ I EGQS+T KWRGKP+F+RHRT EI + N L
Sbjct: 39 LIDQMNPAADTLALANTEVDISKIAEGQSITVKWRGKPVFVRHRTADEIARAETANGDDL 98
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
RDPQ D RV+ P LV++G+CTHLGCVP+ GD+ G++CPCHGSHYD SGRIR
Sbjct: 99 RDPQPDDARVQRPELLVVVGVCTHLGCVPLGQKTGEVRGDYDGWFCPCHGSHYDTSGRIR 158
Query: 171 KGPAPTNMEVPPYQFGDEGIL 191
KGPAPTN+EVPPY F + ++
Sbjct: 159 KGPAPTNLEVPPYTFLSDSVI 179
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ +AD LA+A EVD++ I EGQS+T KWRGKP+F+RHR
Sbjct: 39 LIDQMNPAADTLALANTEVDISKIAEGQSITVKWRGKPVFVRHR 82
>gi|70949262|ref|XP_744058.1| ubiquinol cytochrome c oxidoreductase [Plasmodium chabaudi
chabaudi]
gi|56523847|emb|CAH81362.1| ubiquinol cytochrome c oxidoreductase, putative [Plasmodium
chabaudi chabaudi]
Length = 357
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 117/185 (63%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT--EQNTNISQLRDPQADSDRVK 126
T E+D+ + EG+ V KWRGKP+F++HRT ++I E + + +RDPQ DSDR
Sbjct: 231 EGTTELDMRTVGEGEHVVIKWRGKPIFVKHRTPEDIQRAREDDKLVETMRDPQLDSDRTL 290
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGRIR+GPAP N+EVPPY+F
Sbjct: 291 RPEWLVNIGVCTHLGCIP-APGGNYHGYFCPCHGSHYDNSGRIRQGPAPANLEVPPYEFV 349
Query: 187 DEGIL 191
DE +
Sbjct: 350 DENTI 354
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + EG+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVGEGEHVVIKWRGKPIFVKHR 261
>gi|383483699|ref|YP_005392612.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
parkeri str. Portsmouth]
gi|378936053|gb|AFC74553.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
parkeri str. Portsmouth]
Length = 177
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G C + ++S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVNSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G C + ++S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVNSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|67459402|ref|YP_247026.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
felis URRWXCal2]
gi|75536182|sp|Q4UKR6.1|UCRI_RICFE RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|67004935|gb|AAY61861.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
felis URRWXCal2]
Length = 177
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|330813689|ref|YP_004357928.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327486784|gb|AEA81189.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 173
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 100/130 (76%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
IS M+ + V A+A+IEVD++ I EG+ +T WRGKP+FI+ RT++EI + T++ L
Sbjct: 35 IISQMNPDSSVKALASIEVDISNIQEGKEITVLWRGKPVFIKRRTKEEIQKAEQTSMKDL 94
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DPQ D DRVK WLV++G+CTHLGCVPI G++ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 95 MDPQEDKDRVKKSEWLVVVGVCTHLGCVPIGGKGEYDGWFCPCHGSHYDTSGRIRKGPAP 154
Query: 176 TNMEVPPYQF 185
TN+E+P Y+F
Sbjct: 155 TNLEIPKYEF 164
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ + V A+A+IEVD++ I EG+ +T WRGKP+FI+ R
Sbjct: 35 IISQMNPDSSVKALASIEVDISNIQEGKEITVLWRGKPVFIKRR 78
>gi|34580704|ref|ZP_00142184.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia sibirica
246]
gi|229586520|ref|YP_002845021.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
africae ESF-5]
gi|238650495|ref|YP_002916347.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
peacockii str. Rustic]
gi|374319077|ref|YP_005065575.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
slovaca 13-B]
gi|379712107|ref|YP_005300446.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
philipii str. 364D]
gi|383751003|ref|YP_005426104.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
slovaca str. D-CWPP]
gi|28262089|gb|EAA25593.1| cytochrome b6-f complex iron-sulfur subunit [Rickettsia sibirica
246]
gi|228021570|gb|ACP53278.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
africae ESF-5]
gi|238624593|gb|ACR47299.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
peacockii str. Rustic]
gi|360041625|gb|AEV92007.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
slovaca 13-B]
gi|376328752|gb|AFB25989.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
philipii str. 364D]
gi|379774017|gb|AFD19373.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
slovaca str. D-CWPP]
Length = 177
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|389585461|dbj|GAB68192.1| ubiquinol cytochrome c oxidoreductase [Plasmodium cynomolgi strain
B]
Length = 376
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 118/185 (63%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R+ N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRNGNAD-------RRTFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT--EQNTNISQLRDPQADSDRVK 126
T E+D+ + G+ V KWRGKP+F++HRT ++I E + + +RDPQ DSDR
Sbjct: 231 EGTTELDMRTVSPGEHVVIKWRGKPIFVKHRTPEDIQRAREDDKLVETMRDPQLDSDRTI 290
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGR+R+GPAP+N+EVPPY+F
Sbjct: 291 KPEWLVNIGVCTHLGCIP-APGGNYSGYFCPCHGSHYDNSGRVRQGPAPSNLEVPPYEFI 349
Query: 187 DEGIL 191
DE +
Sbjct: 350 DENTI 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R+ N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRNGNAD-------RRTFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + G+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVSPGEHVVIKWRGKPIFVKHR 261
>gi|242019404|ref|XP_002430151.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, putative
[Pediculus humanus corporis]
gi|212515242|gb|EEB17413.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, putative
[Pediculus humanus corporis]
Length = 199
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 120/193 (62%), Gaps = 29/193 (15%)
Query: 4 HSDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D++TPDF++YR++R + E + K T I AKS+ + +
Sbjct: 31 HTDVKTPDFTEYRKERRKSLDARSRDAEDEDKFNTAAICAVGGAAVAYAAKSLAVRAAAF 90
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+S SADV+A++ IE+D +KEI E+ ++S LRDP+
Sbjct: 91 ISPSADVMALSKIEID-------------------------RKEIAKEEAVDVSTLRDPE 125
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+ RVKD WL+++GICTHLGCVPI N GDW GYYCPCHGSHYDASGRIRKGPAPTN+E
Sbjct: 126 PDNARVKDKEWLIVVGICTHLGCVPIPNQGDWNGYYCPCHGSHYDASGRIRKGPAPTNLE 185
Query: 180 VPPYQFGDEGILI 192
VPPY+F ++ I++
Sbjct: 186 VPPYEFIEDKIIV 198
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 197 HSDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D++TPDF++YR++R + E + K T I AKS+ + +
Sbjct: 31 HTDVKTPDFTEYRKERRKSLDARSRDAEDEDKFNTAAICAVGGAAVAYAAKSLAVRAAAF 90
Query: 253 MSASADVLAMATIEVDLNLIPEGQSV 278
+S SADV+A++ IE+D I + ++V
Sbjct: 91 ISPSADVMALSKIEIDRKEIAKEEAV 116
>gi|221059667|ref|XP_002260479.1| ubiquinol cytochrome c oxidoreductase [Plasmodium knowlesi strain
H]
gi|193810552|emb|CAQ41746.1| ubiquinol cytochrome c oxidoreductase, putative [Plasmodium
knowlesi strain H]
Length = 357
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 117/185 (63%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R+ N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRNGNAD-------RRTFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNTNISQLRDPQADSDRVK 126
T E+D+ + G+ V KWRGKP+F++HRT ++I E + + +RDPQ DSDR
Sbjct: 231 EGTTELDMRTVSPGEHVVIKWRGKPIFVKHRTPEDIQRAKEDDKLVETMRDPQLDSDRTI 290
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGRIR+GPAP N+EVPPY+F
Sbjct: 291 KPEWLVNIGVCTHLGCIP-APGGNYHGYFCPCHGSHYDNSGRIRQGPAPANLEVPPYEFV 349
Query: 187 DEGIL 191
DE +
Sbjct: 350 DENTI 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R+ N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRNGNAD-------RRTFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + G+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVSPGEHVVIKWRGKPIFVKHR 261
>gi|156100539|ref|XP_001615997.1| ubiquinol cytochrome c oxidoreductase [Plasmodium vivax Sal-1]
gi|148804871|gb|EDL46270.1| ubiquinol cytochrome c oxidoreductase, putative [Plasmodium vivax]
Length = 357
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 119/185 (64%), Gaps = 11/185 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R+ N D R++F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLREGNAD-------RRSFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT--EQNTNISQLRDPQADSDRVK 126
T E+D+ + G+ V KWRGKP+F++HRT ++I E + + +RDPQ DSDR
Sbjct: 231 EGTTELDMRTVNPGEHVVIKWRGKPIFVKHRTPEDIQRAREDDKLVETMRDPQLDSDRTI 290
Query: 127 DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGR+R+GPAP+N+EVPPY+F
Sbjct: 291 KPEWLVNIGVCTHLGCIP-APGGNYSGYFCPCHGSHYDNSGRVRQGPAPSNLEVPPYEFV 349
Query: 187 DEGIL 191
DE +
Sbjct: 350 DENTI 354
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R+ N D R++F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLREGNAD-------RRSFMYFISASYFFIMSSIMRSTICKSVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + G+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVNPGEHVVIKWRGKPIFVKHR 261
>gi|209966677|ref|YP_002299592.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum centenum SW]
gi|209960143|gb|ACJ00780.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum centenum SW]
Length = 189
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/152 (55%), Positives = 107/152 (70%), Gaps = 7/152 (4%)
Query: 44 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKE 103
VG V A S V FI S++ +AD LA+A+ EVDL I EGQ++T WRGKP+F+RHRT E
Sbjct: 32 VGAVGAVSAVWPFIDSLNPAADTLALASTEVDLTPIAEGQAITVTWRGKPVFVRHRTAAE 91
Query: 104 IDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANA-----GDWGGYYC 156
I + Q T++ L DPQ DS RVK+ WL+ +GICTHLGCVP+ GD+GG++C
Sbjct: 92 IASAQKTDLGSLIDPQPDSARVKEGHEQWLIAVGICTHLGCVPLGQKSTDPRGDYGGWFC 151
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
PCHGSHYD + RIRKGPAP N+ +P Y F D+
Sbjct: 152 PCHGSHYDTAARIRKGPAPLNLAIPDYTFLDD 183
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 237 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VG V A S V FI S++ +AD LA+A+ EVDL I EGQ++T WRGKP+F+RHR
Sbjct: 32 VGAVGAVSAVWPFIDSLNPAADTLALASTEVDLTPIAEGQAITVTWRGKPVFVRHR 87
>gi|383483148|ref|YP_005392062.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
montanensis str. OSU 85-930]
gi|378935502|gb|AFC74003.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
montanensis str. OSU 85-930]
Length = 177
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSIAAVGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IG+CTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGVCTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSIAAVGAAC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|384261567|ref|YP_005416753.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhodospirillum photometricum DSM 122]
gi|378402667|emb|CCG07783.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhodospirillum photometricum DSM 122]
Length = 252
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 106/142 (74%), Gaps = 5/142 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ SM+ +AD LA+AT EV++ + EGQS+T W+GKP+F+RHRT KEI+ + ++ L
Sbjct: 109 FVDSMNPAADTLALATTEVNIGSVQEGQSITVTWQGKPVFVRHRTAKEIEMARGVDVGTL 168
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
RDPQAD RV+ WL+++GICTHLGC+P+ G++GG++CPCHGSHYD +GR R
Sbjct: 169 RDPQADDVRVQKEQWLILVGICTHLGCIPLGQKSGEPRGEFGGWFCPCHGSHYDTAGRAR 228
Query: 171 KGPAPTNMEVPPYQFGDEGILI 192
KGPAP N+ VPPY+F D+ ++
Sbjct: 229 KGPAPRNLAVPPYKFVDDTTIL 250
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 35/44 (79%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ SM+ +AD LA+AT EV++ + EGQS+T W+GKP+F+RHR
Sbjct: 109 FVDSMNPAADTLALATTEVNIGSVQEGQSITVTWQGKPVFVRHR 152
>gi|262276839|ref|ZP_06054632.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB114]
gi|262223942|gb|EEY74401.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB114]
Length = 176
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
+ +++ R+ F ++ ++ VG V A V ++ M+ A V A+A +EVD++ I +
Sbjct: 5 NNNKDKPTRREFIHI---ATTTVGAVGAGCVALPLVTQMNPDASVKALAKVEVDISKINK 61
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTH 139
G VT WRGKP+FIR RT +E+ + ++ +L+DPQ D DRVK WLV++G+CTH
Sbjct: 62 GNEVTVMWRGKPIFIRRRTDEEVMKARQVSLKELKDPQKDEDRVKKGKDEWLVMVGVCTH 121
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
LGCVP+ G++GG++CPCHGSHYD SGRIRKGPAP NMEVP Y+F + L+
Sbjct: 122 LGCVPLKQQGEYGGWFCPCHGSHYDISGRIRKGPAPVNMEVPNYEFVSDTKLV 174
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
+ +++ R+ F ++ ++ VG V A V ++ M+ A V A+A +EVD++ I +
Sbjct: 5 NNNKDKPTRREFIHI---ATTTVGAVGAGCVALPLVTQMNPDASVKALAKVEVDISKINK 61
Query: 275 GQSVTFKWRGKPLFIRHR 292
G VT WRGKP+FIR R
Sbjct: 62 GNEVTVMWRGKPIFIRRR 79
>gi|379018864|ref|YP_005295098.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hlp#2]
gi|376331444|gb|AFB28678.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rickettsii str. Hlp#2]
Length = 177
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G C + + S++ +ADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPAADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G C + + S++ +ADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAAC---TLWPLVDSLNPAADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|383501960|ref|YP_005415319.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
australis str. Cutlack]
gi|378932971|gb|AFC71476.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
australis str. Cutlack]
Length = 177
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNTNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+A+ G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYSF 168
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNTNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|209965726|ref|YP_002298641.1| rieske iron-sulfur protein [Rhodospirillum centenum SW]
gi|209959192|gb|ACI99828.1| rieske iron-sulfur protein [Rhodospirillum centenum SW]
Length = 189
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 117/172 (68%), Gaps = 8/172 (4%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
GQE+ ++ G + G V A FI S++ ++D L++A+IEVDL+ I EGQ
Sbjct: 13 GQEDGDPSRRDILVLG-TIATGAVGAAIAAWPFIDSLNPASDTLSLASIEVDLSPIAEGQ 71
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLG 141
++T WRGKP+F+RHRT EI+ + T+++ L DPQ D+DRVK+ WL+ IGICTHLG
Sbjct: 72 AITVTWRGKPVFVRHRTAAEIELARKTDLNSLIDPQPDTDRVKEGHEQWLIAIGICTHLG 131
Query: 142 CVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
CVP+ GD+GG++CPCHGSHYD +GRIRKGPAP N+ +P Y F D+
Sbjct: 132 CVPMGQKSTDPRGDYGGWFCPCHGSHYDTAGRIRKGPAPLNLALPDYAFLDD 183
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
GQE+ ++ G + G V A FI S++ ++D L++A+IEVDL+ I EGQ
Sbjct: 13 GQEDGDPSRRDILVLG-TIATGAVGAAIAAWPFIDSLNPASDTLSLASIEVDLSPIAEGQ 71
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 72 AITVTWRGKPVFVRHR 87
>gi|157825488|ref|YP_001493208.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
akari str. Hartford]
gi|157799446|gb|ABV74700.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
akari str. Hartford]
Length = 177
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNTNKQTTRRDFMVLTASSVAAVGAVCT---LWPLMDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+A+ G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLADQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYSF 168
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNTNKQTTRRDFMVLTASSVAAVGAVCT---LWPLMDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|395739024|ref|XP_003777189.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Pongo abelii]
Length = 263
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 122/195 (62%), Gaps = 6/195 (3%)
Query: 3 AHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI PDF YR D ++ RK F ++ ++V AK+V++QF+S
Sbjct: 68 SHTDINVPDFPDYRCIEIFDGTKSSKEDGEARKGFFCLVTATTAVGVAYAAKNVISQFVS 127
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
S+SASADV AM+ IE+ L+ IPEG+++ FKWRGK LF+ HRT+KEID E SQLR P
Sbjct: 128 SISASADVXAMSKIEIKLSDIPEGKNMAFKWRGKSLFVCHRTKKEIDQEAAVEESQLRXP 187
Query: 119 QAD-SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
Q D R P + ++GIC H C PIAN D+GG YCPC GSH DASGRI KGPAP
Sbjct: 188 QHDLRARRGXPIRVSLLGICIHXCCAPIANE-DFGGDYCPCCGSHXDASGRIWKGPAPLE 246
Query: 178 MEVPPYQFGDEGILI 192
+ P Y+F +I
Sbjct: 247 LGAPSYEFTSXDTVI 261
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI PDF YR D ++ RK F ++ ++V AK+V++QF+S
Sbjct: 68 SHTDINVPDFPDYRCIEIFDGTKSSKEDGEARKGFFCLVTATTAVGVAYAAKNVISQFVS 127
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S+SASADV AM+ IE+ L+ IPEG+++ FKWRGK LF+ HR
Sbjct: 128 SISASADVXAMSKIEIKLSDIPEGKNMAFKWRGKSLFVCHR 168
>gi|399219149|emb|CCF76036.1| unnamed protein product [Babesia microti strain RI]
Length = 336
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 122/184 (66%), Gaps = 9/184 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF YR P+ G T+++AF ++ G+ +GM +S + + I + DV A
Sbjct: 157 PDFRDYR---TPNHG--PTKKQAF-HLATAGAMFIGMAMVRSFICKTIHYFYIAKDVSAF 210
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQ--NTNISQLRDPQADSDRVKD 127
++EV + + G+ +T KWR KP+FI+ RT +EI T + + I +RDPQ DS+R +
Sbjct: 211 GSLEVSVGQMVPGEQITVKWRSKPVFIKRRTLEEIKTARLDDKLIDTMRDPQLDSERAPN 270
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV IGICTHLGC+P++ G +GG++CPCHGSHYD+SGRIR+GPAP N+E+PPY F D
Sbjct: 271 PEWLVNIGICTHLGCIPVS-GGSYGGFFCPCHGSHYDSSGRIREGPAPANLEIPPYTFID 329
Query: 188 EGIL 191
+ +
Sbjct: 330 DSTI 333
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF YR P+ G T+++AF ++ G+ +GM +S + + I + DV A
Sbjct: 157 PDFRDYR---TPNHG--PTKKQAF-HLATAGAMFIGMAMVRSFICKTIHYFYIAKDVSAF 210
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++EV + + G+ +T KWR KP+FI+ R
Sbjct: 211 GSLEVSVGQMVPGEQITVKWRSKPVFIKRR 240
>gi|298706177|emb|CBJ49105.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit 1, (Rieske
iron-sulfur protein 1) (RISP1) [Ectocarpus siliculosus]
Length = 251
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 108/156 (69%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
++ FTY + G S + A+ ++ +F++S +ADV+A+AT E +L I G SV FKW
Sbjct: 87 KREFTYFMLGASRFLYASSARLILLKFLASWEPAADVMALATAEFELKDIEMGTSVIFKW 146
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAG 149
RGKP+FI+ R I+ E + LRD + D +R P ++++IGICTHLGCVP+ +AG
Sbjct: 147 RGKPVFIKRRDDAMIEREAGVLMEDLRDQETDEERCLKPEFMIVIGICTHLGCVPLPDAG 206
Query: 150 DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
D+ G +CPCHGSHY+ +GRI KGPAP N+E+PPY+F
Sbjct: 207 DYNGSFCPCHGSHYETAGRIPKGPAPLNLEIPPYKF 242
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
++ FTY + G S + A+ ++ +F++S +ADV+A+AT E +L I G SV FKW
Sbjct: 87 KREFTYFMLGASRFLYASSARLILLKFLASWEPAADVMALATAEFELKDIEMGTSVIFKW 146
Query: 283 RGKPLFIRHR 292
RGKP+FI+ R
Sbjct: 147 RGKPVFIKRR 156
>gi|156089421|ref|XP_001612117.1| ubiquinol cytochrome c oxidoreductase [Babesia bovis T2Bo]
gi|154799371|gb|EDO08549.1| ubiquinol cytochrome c oxidoreductase, putative [Babesia bovis]
Length = 332
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 121/184 (65%), Gaps = 10/184 (5%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR + T R+A Y+++ + + +S+V + I + D+ A
Sbjct: 154 PDFGEYRLPKG-------TDRRAAIYIMSATAMFFFLALGRSLVCKIIHYFWIARDIAAS 206
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
++EV+++ + G VT KWR KP+FI+ RTQ+EI+ + + + +RDP+ D+DR +
Sbjct: 207 GSVEVNVSQMIPGDQVTVKWRSKPVFIKRRTQEEIERSRKDDELLDSMRDPELDADRNVN 266
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV I ICTHLGCVP G++GGY+CPCHGSHYDASGRIR+GPAP+N+EVPPY+F D
Sbjct: 267 PEWLVNIAICTHLGCVP-TKGGNYGGYFCPCHGSHYDASGRIRQGPAPSNLEVPPYKFID 325
Query: 188 EGIL 191
E +
Sbjct: 326 ENTI 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR + T R+A Y+++ + + +S+V + I + D+ A
Sbjct: 154 PDFGEYRLPKG-------TDRRAAIYIMSATAMFFFLALGRSLVCKIIHYFWIARDIAAS 206
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++EV+++ + G VT KWR KP+FI+ R
Sbjct: 207 GSVEVNVSQMIPGDQVTVKWRSKPVFIKRR 236
>gi|321472921|gb|EFX83890.1| hypothetical protein DAPPUDRAFT_47869 [Daphnia pulex]
Length = 165
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 111/158 (70%), Gaps = 10/158 (6%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRT 100
+ +G V A + F+ S++ +ADV A++T++VDL+LIPEGQ +T WRG P+F+RHRT
Sbjct: 3 TCAIGGVGAFGFLWPFLQSLAPAADVAALSTVDVDLSLIPEGQGMTVLWRGTPIFVRHRT 62
Query: 101 QKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGCVPIA-----NAGDWGG 153
+EI+ + LRDP D DRVK +WLV+ G+CTHLGCVP+ N GD+GG
Sbjct: 63 PQEIEEARKV---ALRDPAKDQDRVKPHKEAWLVVFGVCTHLGCVPVGQKPSQNRGDYGG 119
Query: 154 YYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++CPCHGS YD SGR+R+GPAPTN+ +PPY F DE L
Sbjct: 120 WFCPCHGSEYDTSGRVRRGPAPTNLPIPPYVFLDEKTL 157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ +G V A + F+ S++ +ADV A++T++VDL+LIPEGQ +T WRG P+F+RHR
Sbjct: 3 TCAIGGVGAFGFLWPFLQSLAPAADVAALSTVDVDLSLIPEGQGMTVLWRGTPIFVRHR 61
>gi|196018007|ref|XP_002118707.1| hypothetical protein TRIADDRAFT_34599 [Trichoplax adhaerens]
gi|190578411|gb|EDV18806.1| hypothetical protein TRIADDRAFT_34599 [Trichoplax adhaerens]
Length = 158
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 105/140 (75%), Gaps = 3/140 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++S+ VLA + EVD++ I +G++ T WRGKP+FI HRT++EI ++ N++ L
Sbjct: 18 IVTSLKPDKGVLAAGSTEVDISNIKKGETHTVMWRGKPIFITHRTEEEIKEAEDVNLADL 77
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
RDP+ D DRVK P WL+ +GICTHLGCVPI N G++GG++CPCHGSHYD+SGRIRKGP
Sbjct: 78 RDPEPDKDRVKPGKPEWLITVGICTHLGCVPIGNKGEFGGWFCPCHGSHYDSSGRIRKGP 137
Query: 174 APTNMEVPPYQF-GDEGILI 192
AP N+ +PPY+F D I+I
Sbjct: 138 APKNLAIPPYEFISDSKIMI 157
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++S+ VLA + EVD++ I +G++ T WRGKP+FI HR
Sbjct: 18 IVTSLKPDKGVLAAGSTEVDISNIKKGETHTVMWRGKPIFITHR 61
>gi|296448117|ref|ZP_06890018.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylosinus
trichosporium OB3b]
gi|296254382|gb|EFH01508.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylosinus
trichosporium OB3b]
Length = 172
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 100/130 (76%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ A LA+A+ E+D++ I GQ VT KWRGKP+F+R RT++EI+ QN N+++L
Sbjct: 34 LIAQMNPDASTLALASTELDISAIALGQIVTVKWRGKPVFVRRRTKQEIEAAQNVNLAEL 93
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DPQ DS RV+ P WLV++G+CTHLGC+P + G++ G++CPCHGS YD SGRIR GPAP
Sbjct: 94 PDPQPDSARVQKPEWLVVVGVCTHLGCIPTGHEGEFNGWFCPCHGSTYDTSGRIRSGPAP 153
Query: 176 TNMEVPPYQF 185
+N+EVP Y F
Sbjct: 154 SNLEVPQYAF 163
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ A LA+A+ E+D++ I GQ VT KWRGKP+F+R R
Sbjct: 34 LIAQMNPDASTLALASTELDISAIALGQIVTVKWRGKPVFVRRR 77
>gi|237841183|ref|XP_002369889.1| ubiquinol-cytochrome c reductase domain-containing protein
[Toxoplasma gondii ME49]
gi|211967553|gb|EEB02749.1| ubiquinol-cytochrome c reductase domain-containing protein
[Toxoplasma gondii ME49]
gi|221483597|gb|EEE21909.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Toxoplasma gondii GT1]
Length = 487
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 308 PDFREYR------LGPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 361
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
T EVDL I EG + FKWRGKP+F+RHRT ++I Q + I ++DPQ DS+R
Sbjct: 362 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHRTAEDIAKAQADDALIGTMKDPQLDSERCPR 421
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+ IG+CTHLGC+P + G++GG++CPCHGSHYD SGRIR GPAP+N+E+PP F D
Sbjct: 422 PQWLINIGVCTHLGCIP-TDGGNYGGWFCPCHGSHYDTSGRIRLGPAPSNLELPPTVFLD 480
Query: 188 E 188
+
Sbjct: 481 D 481
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 308 PDFREYR------LGPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 361
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T EVDL I EG + FKWRGKP+F+RHR
Sbjct: 362 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHR 391
>gi|315498164|ref|YP_004086968.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Asticcacaulis excentricus CB 48]
gi|315416176|gb|ADU12817.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Asticcacaulis excentricus CB 48]
Length = 179
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 100/136 (73%), Gaps = 2/136 (1%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
V+ + M+ +AD LA+A+ E DL+ + EG V KWRGKPLF+R+RT KEI Q+
Sbjct: 35 VIPPLVDQMNPAADTLALASTEFDLSKVQEGMQVVIKWRGKPLFVRYRTPKEIKEAQDAK 94
Query: 112 ISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRI 169
+S L+DPQ D+DRVK +L+++G CTHLGCVP AGD+GG++CPCHGSHYD SGRI
Sbjct: 95 LSDLKDPQTDADRVKKGKEQYLILVGSCTHLGCVPTFGAGDYGGWFCPCHGSHYDTSGRI 154
Query: 170 RKGPAPTNMEVPPYQF 185
RKGPAP N+ VP +QF
Sbjct: 155 RKGPAPKNLAVPDFQF 170
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V+ + M+ +AD LA+A+ E DL+ + EG V KWRGKPLF+R+R
Sbjct: 35 VIPPLVDQMNPAADTLALASTEFDLSKVQEGMQVVIKWRGKPLFVRYR 82
>gi|118591946|ref|ZP_01549341.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Stappia aggregata IAM 12614]
gi|118435589|gb|EAV42235.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Stappia aggregata IAM 12614]
Length = 186
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 116/175 (66%), Gaps = 17/175 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
Q E R+ F Y+ G VVG A ++ FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGVVG---AGALAWPFIDQMNPDASALALASIEVDISAVEEGQS 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDR--VKDPSW 130
+T KWRGKP+FIR+RT+ E++ + ++ L DP A D++R + W
Sbjct: 63 ITVKWRGKPVFIRNRTETEVEEAKAVPVADLPDPLARNSNLPADAEASDANRGVEGNEKW 122
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LV +GICTHLGCVPI ++GD+GG++CPCHGSHYD +GRIRKGPAP N+ +PP +F
Sbjct: 123 LVQVGICTHLGCVPIGSSGDFGGWFCPCHGSHYDTAGRIRKGPAPENLLIPPLEF 177
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
Q E R+ F Y+ G VVG A ++ FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGVVG---AGALAWPFIDQMNPDASALALASIEVDISAVEEGQS 62
Query: 278 VTFKWRGKPLFIRHR 292
+T KWRGKP+FIR+R
Sbjct: 63 ITVKWRGKPVFIRNR 77
>gi|91762769|ref|ZP_01264734.1| cytochrome b6-f complex iron-sulfur subunit [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718571|gb|EAS85221.1| cytochrome b6-f complex iron-sulfur subunit [Candidatus
Pelagibacter ubique HTCC1002]
Length = 169
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 98/130 (75%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ A V A+A+ EVD++ + G+++T WRGKP+FI+ RT +E+ + + L
Sbjct: 31 LIDQMNPDASVKALASTEVDVSSVQPGKTITVLWRGKPVFIKRRTPEEVAEARAVKMEDL 90
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
+DPQ D DR KDP WLV++G+CTHLGCVP+ + GD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 91 KDPQKDEDRAKDPEWLVMLGVCTHLGCVPLNDKGDYNGWFCPCHGSHYDISGRIRKGPAP 150
Query: 176 TNMEVPPYQF 185
TNMEVP Y+F
Sbjct: 151 TNMEVPKYEF 160
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ A V A+A+ EVD++ + G+++T WRGKP+FI+ R
Sbjct: 31 LIDQMNPDASVKALASTEVDVSSVQPGKTITVLWRGKPVFIKRR 74
>gi|71082808|ref|YP_265527.1| cytochrome b6-f complex iron-sulfur subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|71061921|gb|AAZ20924.1| cytochrome b6-f complex iron-sulfur subunit [Candidatus
Pelagibacter ubique HTCC1062]
Length = 169
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 98/130 (75%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ M+ A V A+A+ EVD++ + G+++T WRGKP+FI+ RT +E+ + + L
Sbjct: 31 LVDQMNPDASVKALASTEVDVSSVQPGKTITVLWRGKPVFIKRRTPEEVAEARAVKMEDL 90
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
+DPQ D DR KDP WLV++G+CTHLGCVP+ + GD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 91 KDPQKDEDRAKDPEWLVMLGVCTHLGCVPLNDKGDYNGWFCPCHGSHYDISGRIRKGPAP 150
Query: 176 TNMEVPPYQF 185
TNMEVP Y+F
Sbjct: 151 TNMEVPKYEF 160
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ M+ A V A+A+ EVD++ + G+++T WRGKP+FI+ R
Sbjct: 31 LVDQMNPDASVKALASTEVDVSSVQPGKTITVLWRGKPVFIKRR 74
>gi|401399508|ref|XP_003880566.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, related
[Neospora caninum Liverpool]
gi|325114977|emb|CBZ50533.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, related
[Neospora caninum Liverpool]
Length = 382
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 113/181 (62%), Gaps = 9/181 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 203 PDFREYRL------GPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 256
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
T EVDL I EG + FKWRGKP+F+RHRT ++I Q + I ++DPQ DS+R
Sbjct: 257 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHRTAEDIAKAQADDALIGTMKDPQLDSERCPR 316
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+ IG+CTHLGC+P + G++GG++CPCHGSHYD SGRIR GPAP N+E+PP F D
Sbjct: 317 PQWLINIGVCTHLGCIP-TDGGNYGGWFCPCHGSHYDTSGRIRLGPAPANLELPPTVFLD 375
Query: 188 E 188
+
Sbjct: 376 D 376
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 203 PDFREYRL------GPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 256
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T EVDL I EG + FKWRGKP+F+RHR
Sbjct: 257 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHR 286
>gi|221504377|gb|EEE30052.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
[Toxoplasma gondii VEG]
Length = 258
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 114/181 (62%), Gaps = 9/181 (4%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 79 PDFREYR------LGPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 132
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
T EVDL I EG + FKWRGKP+F+RHRT ++I Q + I ++DPQ DS+R
Sbjct: 133 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHRTAEDIAKAQADDALIGTMKDPQLDSERCPR 192
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+ IG+CTHLGC+P + G++GG++CPCHGSHYD SGRIR GPAP+N+E+PP F D
Sbjct: 193 PQWLINIGVCTHLGCIP-TDGGNYGGWFCPCHGSHYDTSGRIRLGPAPSNLELPPTVFLD 251
Query: 188 E 188
+
Sbjct: 252 D 252
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR G R+ F Y ++ + +S + +++ S D+LA
Sbjct: 79 PDFREYR------LGPGSVDRRPFVYFMSASYFFITASMMRSFLCKWVHYWWVSRDMLAA 132
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T EVDL I EG + FKWRGKP+F+RHR
Sbjct: 133 GTTEVDLRPIQEGMTAVFKWRGKPVFVRHR 162
>gi|407782980|ref|ZP_11130187.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Oceanibaculum indicum P24]
gi|407203890|gb|EKE73873.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Oceanibaculum indicum P24]
Length = 188
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 99/135 (73%), Gaps = 5/135 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI + +AD LA+A+ EVD++ I EGQ++T WRGKP+FIRHRT EI+ + L
Sbjct: 45 FIDQWNPAADTLALASTEVDISKIAEGQAITVSWRGKPVFIRHRTATEIEEATAVPLGDL 104
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
DPQAD+ R + P WLV++G+CTHLGC+P+ + G++GG++CPCHGSHYD SGRIR
Sbjct: 105 PDPQADTARTEKPEWLVVVGVCTHLGCIPLGQSSTQPRGEFGGWFCPCHGSHYDTSGRIR 164
Query: 171 KGPAPTNMEVPPYQF 185
KGPAP N+ VP YQF
Sbjct: 165 KGPAPENLPVPEYQF 179
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI + +AD LA+A+ EVD++ I EGQ++T WRGKP+FIRHR
Sbjct: 45 FIDQWNPAADTLALASTEVDISKIAEGQAITVSWRGKPVFIRHR 88
>gi|68067412|ref|XP_675674.1| ubiquinol cytochrome c oxidoreductase [Plasmodium berghei strain
ANKA]
gi|56494995|emb|CAH97042.1| ubiquinol cytochrome c oxidoreductase, putative [Plasmodium
berghei]
Length = 356
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 115/184 (62%), Gaps = 10/184 (5%)
Query: 10 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 68
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID-TEQNTNISQLRDPQADSDRVKD 127
T E+D+ + EG+ V KWRGKP+F++HRT ++I ++ + + PQ DSDR
Sbjct: 231 EGTTELDMRTVGEGEQVVIKWRGKPIFVKHRTPEDIQKAREDDKLVETMRPQLDSDRTIR 290
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV IG+CTHLGC+P A G++ GY+CPCHGSHYD SGRIR+GPAP N+EVPPY+F D
Sbjct: 291 PEWLVNIGVCTHLGCIP-APGGNYNGYFCPCHGSHYDNSGRIRQGPAPANLEVPPYEFVD 349
Query: 188 EGIL 191
E +
Sbjct: 350 ENTI 353
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 203 PDFSKYR-RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLA 261
PDF +YR R N D R+ F Y I+ + +S + + + S D++A
Sbjct: 178 PDFREYRLRSGNAD-------RRTFMYFISASYFFIMSSIMRSTICKAVHFFWISKDLVA 230
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T E+D+ + EG+ V KWRGKP+F++HR
Sbjct: 231 EGTTELDMRTVGEGEQVVIKWRGKPIFVKHR 261
>gi|114704335|ref|ZP_01437243.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Fulvimarina pelagi HTCC2506]
gi|114539120|gb|EAU42240.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Fulvimarina pelagi HTCC2506]
Length = 194
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 105/147 (71%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ A LA+A+I+VD++ + EGQS+T KWRGKP+FIR RTQ+EID ++ ++S+L
Sbjct: 42 FIDQMNPDAATLALASIDVDVSQVAEGQSITAKWRGKPIFIRQRTQQEIDEARSVDLSEL 101
Query: 116 RDPQA-------DSDRVK-------DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D+D +WLV++G+CTHLGC+P+ AGD+ GY+CPCHGS
Sbjct: 102 KDPMARNANLPGDADATDVNRAATDKEAWLVMVGVCTHLGCIPLGQAGDYDGYFCPCHGS 161
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIR GPAP NM +PP+ F D+
Sbjct: 162 HYDTAGRIRTGPAPENMAIPPFSFSDD 188
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ A LA+A+I+VD++ + EGQS+T KWRGKP+FIR R
Sbjct: 42 FIDQMNPDAATLALASIDVDVSQVAEGQSITAKWRGKPIFIRQR 85
>gi|433615292|ref|YP_007192089.1| Rieske Fe-S protein [Sinorhizobium meliloti GR4]
gi|76800480|gb|ABA55658.1| FbcF [Sinorhizobium meliloti]
gi|429553491|gb|AGA08490.1| Rieske Fe-S protein [Sinorhizobium meliloti GR4]
Length = 187
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 118/180 (65%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E ++ F Y++ + VVG+ A FI M A LAMA+IEVD++ + EG S+T
Sbjct: 8 EPSKRDFLYLVTAMAGVVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLVEGTSLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------PSWL 131
KWRG+P+FIR+RTQ+EI+T + ++ L+DP A + + D +W+
Sbjct: 65 VKWRGRPVFIRNRTQQEIETARAAALADLKDPLARNANLVDDQPATDLARSAGEGRENWI 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ AGD+GG++CPCHGSHYD +GR+RKGPAP N+ +P ++F E ++
Sbjct: 125 VMIGVCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRVRKGPAPENLAIPSFEFISETVV 184
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E ++ F Y++ + VVG+ A FI M A LAMA+IEVD++ + EG S+T
Sbjct: 8 EPSKRDFLYLVTAMAGVVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLVEGTSLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+FIR+R
Sbjct: 65 VKWRGRPVFIRNR 77
>gi|408377539|ref|ZP_11175140.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
albertimagni AOL15]
gi|407748530|gb|EKF60045.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
albertimagni AOL15]
Length = 192
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 114/180 (63%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F YM+ G + G V A S FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYMVTG---MAGAVGAASFAWPFIDQMRPDASTLALASIEVDVSALEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRGKP+FIR+RT KE++ +++L+DP A ++ V +W+
Sbjct: 70 VKWRGKPVFIRNRTDKEVEEANAVALAELKDPVARNENVDASAEATDLARSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAPTN+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPTNLPVPTFAFTSDTVI 189
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F YM+ G + G V A S FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYMVTG---MAGAVGAASFAWPFIDQMRPDASTLALASIEVDVSALEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPVFIRNR 82
>gi|307944170|ref|ZP_07659511.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Roseibium
sp. TrichSKD4]
gi|307772516|gb|EFO31736.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Roseibium
sp. TrichSKD4]
Length = 186
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 115/181 (63%), Gaps = 17/181 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
Q E R+ F Y+ G VG+ SV FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGAVGV---GSVAWPFIDQMNPDASALALASIEVDVSAVEEGQS 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVKD--PSW 130
+T +WRGKP+FIR+RT +EID + I L DP A D +R + W
Sbjct: 63 ITVQWRGKPVFIRYRTAEEIDAANSVEIEDLPDPLARNANLAADAPATDVNRGAEGKEQW 122
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGI 190
+V +GICTHLGCVP+ +AG++ G++CPCHGSHYD +GRIRKGPAP N+ +PP+ F D+
Sbjct: 123 IVQVGICTHLGCVPLGDAGEFNGWFCPCHGSHYDTAGRIRKGPAPENLLIPPFAFVDDST 182
Query: 191 L 191
+
Sbjct: 183 I 183
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
Q E R+ F Y+ G VG+ SV FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGAVGV---GSVAWPFIDQMNPDASALALASIEVDVSAVEEGQS 62
Query: 278 VTFKWRGKPLFIRHR 292
+T +WRGKP+FIR+R
Sbjct: 63 ITVQWRGKPVFIRYR 77
>gi|91205643|ref|YP_537998.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
bellii RML369-C]
gi|122425531|sp|Q1RIA5.1|UCRI_RICBR RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|91069187|gb|ABE04909.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
bellii RML369-C]
Length = 186
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 116/163 (71%), Gaps = 5/163 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ +T R+ F + A + VG C + I+S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLINSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
VT KW+GKP+FI +RT +I + +S+L DP+ D DRVK +WLV IGICTHLGC
Sbjct: 75 VTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGC 134
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+AN GD+ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 135 VPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 177
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ +T R+ F + A + VG C + I+S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLINSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 278 VTFKWRGKPLFIRHR 292
VT KW+GKP+FI +R
Sbjct: 75 VTVKWQGKPVFITNR 89
>gi|397484611|ref|XP_003813467.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Pan paniscus]
Length = 263
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
Query: 3 AHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI PDF Y D ++ RK F+Y++ ++V AK+V++QF+S
Sbjct: 68 SHTDINVPDFPDYCCIEIFDGTKSSKEDSEARKGFSYLVTATTAVGVTYAAKNVISQFVS 127
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
S+SASAD AM+ I + L IPEG+++ FKWRGK LF+ HRT+KEID E SQLR P
Sbjct: 128 SISASADESAMSKIGIKLFDIPEGKNMAFKWRGKSLFVCHRTKKEIDQEPAAEESQLRXP 187
Query: 119 QAD-SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
D R + P + ++G+C H C PIAN D+GG YCPC GSH DASGRI KGPAP
Sbjct: 188 XHDLRARHRXPIRVSLLGVCIHXCCAPIANE-DFGGDYCPCWGSHXDASGRIWKGPAPLE 246
Query: 178 MEVPPYQFGDEGILI 192
+ P Y+F E +I
Sbjct: 247 LGAPSYEFTSEDTVI 261
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYR----RDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI PDF Y D ++ RK F+Y++ ++V AK+V++QF+S
Sbjct: 68 SHTDINVPDFPDYCCIEIFDGTKSSKEDSEARKGFSYLVTATTAVGVTYAAKNVISQFVS 127
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S+SASAD AM+ I + L IPEG+++ FKWRGK LF+ HR
Sbjct: 128 SISASADESAMSKIGIKLFDIPEGKNMAFKWRGKSLFVCHR 168
>gi|406705748|ref|YP_006756101.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB5]
gi|406651524|gb|AFS46924.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HIMB5]
Length = 171
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 73/130 (56%), Positives = 97/130 (74%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ A V A+A+ EVD++ + G ++T WRGKP+FIR RTQ+EID + + +L
Sbjct: 33 MIDQMNPDASVKALASTEVDVSSVQPGNTITVLWRGKPVFIRRRTQEEIDEARAVKMEEL 92
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
P+ D DR K+P WLV++G+CTHLGCVP+ + GD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 93 IHPEKDEDRAKNPEWLVMLGVCTHLGCVPLNDKGDYNGWFCPCHGSHYDTSGRIRKGPAP 152
Query: 176 TNMEVPPYQF 185
NMEVP Y+F
Sbjct: 153 WNMEVPKYEF 162
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ A V A+A+ EVD++ + G ++T WRGKP+FIR R
Sbjct: 33 MIDQMNPDASVKALASTEVDVSSVQPGNTITVLWRGKPVFIRRR 76
>gi|157827355|ref|YP_001496419.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
bellii OSU 85-389]
gi|157802659|gb|ABV79382.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
bellii OSU 85-389]
Length = 186
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 115/163 (70%), Gaps = 5/163 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ +T R+ F + A + VG C + I S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLIDSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
VT KW+GKP+FI +RT +I + +S+L DP+ D DRVK +WLV IGICTHLGC
Sbjct: 75 VTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGC 134
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+AN GD+ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 135 VPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 177
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ +T R+ F + A + VG C + I S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLIDSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 278 VTFKWRGKPLFIRHR 292
VT KW+GKP+FI +R
Sbjct: 75 VTVKWQGKPVFITNR 89
>gi|379714114|ref|YP_005302452.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
massiliae str. AZT80]
gi|376334760|gb|AFB31992.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
massiliae str. AZT80]
Length = 177
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD+ RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTPDKIAEARAVKMSELLDPEADAARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>gi|163761611|ref|ZP_02168682.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Hoeflea phototrophica DFL-43]
gi|162281207|gb|EDQ31507.1| probable ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Hoeflea phototrophica DFL-43]
Length = 188
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 114/184 (61%), Gaps = 18/184 (9%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ G + VVG A S FI M A LA+A+IEV++ + G
Sbjct: 5 EGAGEPTRRDFLYIATGMAGVVG---AGSFAWPFIDQMRPDASTLALASIEVNVGALEPG 61
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS------------- 129
S+T KWRGKP+FIR+RT +EI Q + L+DP A + + D +
Sbjct: 62 MSLTVKWRGKPVFIRNRTDEEIAEAQAVAMEDLKDPIARNANLADAAPATDVDRSAGEGL 121
Query: 130 --WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
W+V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAPTN+ VPP+ F
Sbjct: 122 ENWIVMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPTNLPVPPFAFVS 181
Query: 188 EGIL 191
+ ++
Sbjct: 182 DSVI 185
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ G + VVG A S FI M A LA+A+IEV++ + G
Sbjct: 5 EGAGEPTRRDFLYIATGMAGVVG---AGSFAWPFIDQMRPDASTLALASIEVNVGALEPG 61
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 62 MSLTVKWRGKPVFIRNR 78
>gi|383481292|ref|YP_005390207.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|378933631|gb|AFC72134.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 177
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD+ RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTPDKIAEARAVKMSELIDPEADAARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>gi|426401148|ref|YP_007020120.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Endolissoclinum patella L2]
gi|425857816|gb|AFX98852.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Endolissoclinum patella L2]
Length = 176
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 109/166 (65%), Gaps = 8/166 (4%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ T R+ F + VG C FI M+ SAD+LA+A ++ DL+ I EGQS
Sbjct: 5 NKNTSRREFLITTTNIFAAVGAAC---FAWPFIDQMNPSADMLALAKVDFDLSKIAEGQS 61
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVP 144
+T WRGKP+F+RHRT +EI+ +++L DP+ DS R + P +L+++GICTHLGCVP
Sbjct: 62 MTVIWRGKPIFVRHRTAQEIEKANLVKLTELPDPEDDSTRAQKPEYLIVVGICTHLGCVP 121
Query: 145 IAN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ G++ G++CPCHGS YD SGRIRKGPAPTN+ VP YQ+
Sbjct: 122 LGQNPNEPKGEYEGWFCPCHGSQYDTSGRIRKGPAPTNLPVPKYQY 167
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ T R+ F + VG C FI M+ SAD+LA+A ++ DL+ I EGQS
Sbjct: 5 NKNTSRREFLITTTNIFAAVGAAC---FAWPFIDQMNPSADMLALAKVDFDLSKIAEGQS 61
Query: 278 VTFKWRGKPLFIRHR 292
+T WRGKP+F+RHR
Sbjct: 62 MTVIWRGKPIFVRHR 76
>gi|328542792|ref|YP_004302901.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Polymorphum
gilvum SL003B-26A1]
gi|326412538|gb|ADZ69601.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Polymorphum
gilvum SL003B-26A1]
Length = 186
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 115/181 (63%), Gaps = 18/181 (9%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G VG+ ++ FI M+ A LA+A+IEVD++ + EGQS+T
Sbjct: 8 EPTRRDFLYIATGAMGAVGV---GALAWPFIDQMNPDASALALASIEVDVSAVEEGQSIT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS--------------WLV 132
KWRGKP+FIR+RT EI+ + + L D A + + D + WLV
Sbjct: 65 VKWRGKPVFIRYRTAAEIEEAKAVPLGDLPDKFARNANLPDTADASDANRAAAGKEEWLV 124
Query: 133 IIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGIL 191
+GICTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIR+GPAP N+ VPPY+F GD I
Sbjct: 125 QVGICTHLGCVPLGDAGDFGGWFCPCHGSHYDTAGRIRRGPAPENLLVPPYEFVGDTTIK 184
Query: 192 I 192
I
Sbjct: 185 I 185
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G VG+ ++ FI M+ A LA+A+IEVD++ + EGQS+T
Sbjct: 8 EPTRRDFLYIATGAMGAVGV---GALAWPFIDQMNPDASALALASIEVDVSAVEEGQSIT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPVFIRYR 77
>gi|399073407|ref|ZP_10750455.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
sp. AP07]
gi|398041773|gb|EJL34828.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
sp. AP07]
Length = 183
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 112/168 (66%), Gaps = 6/168 (3%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
+P +G + ++R F Y+ + V A S+ FI M+ SAD LA+A+IE DL+ +
Sbjct: 11 DPAQGSDPSRRD-FIYI---ATIAVAAGGAASIAWPFIDQMNPSADTLALASIEFDLSKV 66
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGIC 137
GQ VT KWRGKPLF+R+RT EI + + L+DPQ D++RVK +WLV+IG C
Sbjct: 67 AAGQQVTVKWRGKPLFVRNRTPAEIAAAVKDDHAALKDPQTDAERVKPGKANWLVLIGSC 126
Query: 138 THLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
THLGCVP G++GG++CPCHGS YD SGRIR+GPAP N+ VP Y F
Sbjct: 127 THLGCVPTFGGGEYGGWFCPCHGSVYDTSGRIRQGPAPKNLAVPEYAF 174
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
+P +G + ++R F Y+ + V A S+ FI M+ SAD LA+A+IE DL+ +
Sbjct: 11 DPAQGSDPSRRD-FIYI---ATIAVAAGGAASIAWPFIDQMNPSADTLALASIEFDLSKV 66
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
GQ VT KWRGKPLF+R+R
Sbjct: 67 AAGQQVTVKWRGKPLFVRNR 86
>gi|147833316|emb|CAN59729.1| hypothetical protein VITISV_037737 [Vitis vinifera]
Length = 241
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 100/137 (72%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A+IEVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPGSTVT 164
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+ +I ++ LRDPQ D+ RVKDP WL++IG+CTHLGC+P+
Sbjct: 165 VKWRGKPVFIRRRTEDDIKLANXVDVGSLRDPQEDAVRVKDPEWLIVIGVCTHLGCIPLP 224
Query: 147 NAGDWGGYYCPCHGSHY 163
NAGD+GG++CPCHGSHY
Sbjct: 225 NAGDFGGWFCPCHGSHY 241
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G + + +V +F+ SMSAS DVLA+A+IEVDL+ I G +VT
Sbjct: 105 DPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPGSTVT 164
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 165 VKWRGKPVFIRRR 177
>gi|350273331|ref|YP_004884644.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
japonica YH]
gi|348592544|dbj|BAK96505.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
japonica YH]
Length = 177
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 116/163 (71%), Gaps = 5/163 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
++T R+ F + A + VG CA + + S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 9 NKQTTRRDFMVLTASSVAAVGAACA---LWPLVDSLNPSADVLALSSIEVDLSNIAVGQT 65
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTHLGC
Sbjct: 66 VTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTHLGC 125
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 126 VPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
++T R+ F + A + VG CA + + S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 9 NKQTTRRDFMVLTASSVAAVGAACA---LWPLVDSLNPSADVLALSSIEVDLSNIAVGQT 65
Query: 278 VTFKWRGKPLFIRHR 292
VT KW+GKP+FI +R
Sbjct: 66 VTVKWQGKPVFITNR 80
>gi|154246892|ref|YP_001417850.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Xanthobacter
autotrophicus Py2]
gi|154160977|gb|ABS68193.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Xanthobacter
autotrophicus Py2]
Length = 175
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 98/132 (74%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FIS + A VLA++T EVD++ I GQ VT +WRGKP+FI HRT EI + Q+ +S+L
Sbjct: 35 FISQLQPDASVLALSTTEVDISPIAVGQIVTVQWRGKPIFISHRTPAEIKSAQDVPLSEL 94
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DPQ D DRVK WLV+IGICTHLGCVP+ + G + G++CPCHGS YD SGRIR+GP
Sbjct: 95 KDPQPDQDRVKAGKDQWLVVIGICTHLGCVPLGHQGQYNGWFCPCHGSVYDTSGRIRQGP 154
Query: 174 APTNMEVPPYQF 185
AP N+ +PPY F
Sbjct: 155 APLNLALPPYTF 166
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS + A VLA++T EVD++ I GQ VT +WRGKP+FI HR
Sbjct: 35 FISQLQPDASVLALSTTEVDISPIAVGQIVTVQWRGKPIFISHR 78
>gi|254456418|ref|ZP_05069847.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Pelagibacter sp. HTCC7211]
gi|207083420|gb|EDZ60846.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Pelagibacter sp. HTCC7211]
Length = 169
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 96/130 (73%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ A V A+A+ EVD++ + G ++T WRGKP+FIR RT++EI ++ + L
Sbjct: 31 LIDQMNPDASVKALASTEVDISSVKRGNTITVLWRGKPVFIRRRTEEEIKEARSVKMEDL 90
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
P+ D DR K+P WLV++G+CTHLGCVP+ + GD+ G++CPCHGSHYD SGRIRKGPAP
Sbjct: 91 IHPEKDEDRAKNPEWLVMLGVCTHLGCVPLNDKGDYDGWFCPCHGSHYDTSGRIRKGPAP 150
Query: 176 TNMEVPPYQF 185
NMEVP Y+F
Sbjct: 151 LNMEVPKYEF 160
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ A V A+A+ EVD++ + G ++T WRGKP+FIR R
Sbjct: 31 LIDQMNPDASVKALASTEVDISSVKRGNTITVLWRGKPVFIRRR 74
>gi|406989897|gb|EKE09606.1| hypothetical protein ACD_16C00130G0011 [uncultured bacterium]
Length = 193
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 101/137 (73%), Gaps = 7/137 (5%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ SM+ +ADVLA +TI+VDL+ IPEGQ++T WRGKP+F+RHRT +EI + T +S+L
Sbjct: 41 FLDSMNPAADVLAQSTIDVDLSPIPEGQAITVVWRGKPIFVRHRTAEEIRVAEQTPLSEL 100
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGR 168
DP+ D RVK WL+++G+CTHLGC+P N G +GG++CPCHGS YD SGR
Sbjct: 101 LDPETDQARVKKGHAQWLIVVGVCTHLGCIPTGNKSTQNRGKYGGWHCPCHGSLYDTSGR 160
Query: 169 IRKGPAPTNMEVPPYQF 185
+R+GPAP N VPPY F
Sbjct: 161 VRRGPAPLNFYVPPYVF 177
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 38/44 (86%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ SM+ +ADVLA +TI+VDL+ IPEGQ++T WRGKP+F+RHR
Sbjct: 41 FLDSMNPAADVLAQSTIDVDLSPIPEGQAITVVWRGKPIFVRHR 84
>gi|83592528|ref|YP_426280.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum ATCC 11170]
gi|386349254|ref|YP_006047502.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum F11]
gi|83575442|gb|ABC21993.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum ATCC 11170]
gi|346717690|gb|AEO47705.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodospirillum rubrum F11]
Length = 188
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 102/141 (72%), Gaps = 5/141 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI ++ +AD A++T EVD++ I EGQ++T W+GKP+F+RHRT EI Q + + L
Sbjct: 45 FIDFLNPAADTRALSTTEVDISGIVEGQAITVTWQGKPVFVRHRTALEIAEAQAVDPATL 104
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIAN-----AGDWGGYYCPCHGSHYDASGRIR 170
RDPQ D +RV++ WLV+IGICTHLGC+P+ GD+ G++CPCHGSHYD+SGR R
Sbjct: 105 RDPQTDGERVQNAPWLVMIGICTHLGCIPLGQKTGDPKGDFDGWFCPCHGSHYDSSGRAR 164
Query: 171 KGPAPTNMEVPPYQFGDEGIL 191
KGPAP NM +PPY F D+ L
Sbjct: 165 KGPAPLNMAIPPYTFRDDTTL 185
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI ++ +AD A++T EVD++ I EGQ++T W+GKP+F+RHR
Sbjct: 45 FIDFLNPAADTRALSTTEVDISGIVEGQAITVTWQGKPVFVRHR 88
>gi|398352584|ref|YP_006398048.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Sinorhizobium fredii USDA 257]
gi|390127910|gb|AFL51291.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Sinorhizobium fredii USDA 257]
Length = 187
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 115/177 (64%), Gaps = 18/177 (10%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
++ F Y++ + VG+ A FI M A LAMA+IEVD++ + EG S+T KW
Sbjct: 11 KRDFLYLVTAMAGAVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLAEGMSLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------PSWLVII 134
RG+P+FIR+RTQ+EI+ + T + L+DP A + + D +W+V+I
Sbjct: 68 RGRPVFIRNRTQQEIEAAKATALDDLKDPFARNANLSDDQPATDVARSAGEAKENWIVMI 127
Query: 135 GICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
G+CTHLGCVP+ AGD+GG++CPCHGSHYD +GR+RKGPAP N+ +P ++F E ++
Sbjct: 128 GVCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRVRKGPAPENLAIPRFEFVSETVV 184
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
++ F Y++ + VG+ A FI M A LAMA+IEVD++ + EG S+T KW
Sbjct: 11 KRDFLYLVTAMAGAVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLAEGMSLTVKW 67
Query: 283 RGKPLFIRHR 292
RG+P+FIR+R
Sbjct: 68 RGRPVFIRNR 77
>gi|27377596|ref|NP_769125.1| Rieske iron-sulfur protein [Bradyrhizobium japonicum USDA 110]
gi|1717955|sp|P51130.1|UCRI_BRAJA RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|152083|gb|AAA26199.1| Rieske iron-sulfur protein [Bradyrhizobium japonicum]
gi|27350741|dbj|BAC47750.1| rieske iron-sulfur protein [Bradyrhizobium japonicum USDA 110]
Length = 176
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HRT+K+ID + N++
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVAS 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+D RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 155 PAPANLPVPPYQF 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HR
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHR 79
>gi|307198244|gb|EFN79244.1| Cytochrome b-c1 complex subunit Rieske, mitochondrial [Harpegnathos
saltator]
Length = 130
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
+LA + +EV L I EG KWRGKP+FI HRTQ I+ E+ +S+LRDP+ D DRV
Sbjct: 1 MLAESQLEVKLQNISEGHVAIVKWRGKPVFIYHRTQSIIEQEKAVKLSELRDPETDDDRV 60
Query: 126 KDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
K P WL++IG+CTHLGC+PI NAG GG+ CPCHGSH+DA+GRIRKGPAPTN+EVP Y+
Sbjct: 61 KRPEWLIVIGVCTHLGCIPIPNAGIISGGFLCPCHGSHFDAAGRIRKGPAPTNLEVPEYK 120
Query: 185 F-GDEGILI 192
F D+ I+I
Sbjct: 121 FTTDDSIVI 129
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+LA + +EV L I EG KWRGKP+FI HR
Sbjct: 1 MLAESQLEVKLQNISEGHVAIVKWRGKPVFIYHR 34
>gi|329851290|ref|ZP_08266047.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Asticcacaulis biprosthecum C19]
gi|328840136|gb|EGF89708.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Asticcacaulis biprosthecum C19]
Length = 180
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ +AD LA+A+IE D+ + EGQ V KWRGKPLF+RHRT EI Q ++ +
Sbjct: 40 LIGQMNPAADTLALASIEYDVGKVAEGQQVVVKWRGKPLFVRHRTAAEIQEAQGADLGGM 99
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DPQ DSDRVK +LV++G+CTHLGCVP ++GG++CPCHGS YD SGRIRKGP
Sbjct: 100 KDPQPDSDRVKAGKEQYLVLVGVCTHLGCVPNMGGSEFGGWFCPCHGSDYDTSGRIRKGP 159
Query: 174 APTNMEVPPYQF 185
AP N+EVP Y F
Sbjct: 160 APKNLEVPEYAF 171
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ +AD LA+A+IE D+ + EGQ V KWRGKPLF+RHR
Sbjct: 40 LIGQMNPAADTLALASIEYDVGKVAEGQQVVVKWRGKPLFVRHR 83
>gi|6136100|sp|P81380.2|UCRI_RHOVI RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
Length = 179
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 3/135 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FI+ M+ +A + A A I++D++ + EGQ V WRGKP+FIRHRT KEI +E+ ++
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGA 93
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ DS RVK WLV+ CTHLGC+P+ + GDWGG++CPCHGS YDASGR+RKG
Sbjct: 94 LIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKG 153
Query: 173 PAPTNMEVPPYQFGD 187
PAPTN+ VPPY+F D
Sbjct: 154 PAPTNLPVPPYEFVD 168
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI+ M+ +A + A A I++D++ + EGQ V WRGKP+FIRHR
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHR 78
>gi|339320504|ref|YP_004680199.1| ubiquinol-cytochrome c reductase iron-sulfur subunit OS [Candidatus
Midichloria mitochondrii IricVA]
gi|338226629|gb|AEI89513.1| ubiquinol-cytochrome c reductase iron-sulfur subunit OS [Candidatus
Midichloria mitochondrii IricVA]
Length = 186
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI S+S A VLA + EVDL+ I EG+++T WRGKP+F+ RT +I+ ++ N+++L
Sbjct: 45 FIRSLSPDASVLAAGSTEVDLSNIKEGETITVMWRGKPIFVTKRTSAQIEEARSVNLAEL 104
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCP-CHGSHYDASGRIRKG 172
RDPQ+D +RVK WL+ IG+CTHLGCVP++ GD G++CP CHGSHYD+SGRIRKG
Sbjct: 105 RDPQSDEERVKKGKEQWLITIGVCTHLGCVPVSGKGDHDGWFCPFCHGSHYDSSGRIRKG 164
Query: 173 PAPTNMEVPPYQF 185
PAP N+ +PPY+F
Sbjct: 165 PAPANLAIPPYEF 177
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI S+S A VLA + EVDL+ I EG+++T WRGKP+F+ R
Sbjct: 45 FIRSLSPDASVLAAGSTEVDLSNIKEGETITVMWRGKPIFVTKR 88
>gi|157964341|ref|YP_001499165.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
massiliae MTU5]
gi|157844117|gb|ABV84618.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
massiliae MTU5]
Length = 175
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 115/163 (70%), Gaps = 5/163 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 7 NKNTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAVGQT 63
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
VT KW+GKP+FI +RT +I + +S+L DP+AD+ RVK +WLV IGICTHLGC
Sbjct: 64 VTVKWQGKPIFITNRTPDKIAEARAVKMSELIDPEADAARVKAGHDNWLVTIGICTHLGC 123
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 124 VPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 166
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 7 NKNTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAVGQT 63
Query: 278 VTFKWRGKPLFIRHR 292
VT KW+GKP+FI +R
Sbjct: 64 VTVKWQGKPIFITNR 78
>gi|374573750|ref|ZP_09646846.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. WSM471]
gi|386397422|ref|ZP_10082200.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. WSM1253]
gi|374422071|gb|EHR01604.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. WSM471]
gi|385738048|gb|EIG58244.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. WSM1253]
Length = 176
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL+ + EGQ + WRGKP++I HRT+K+ID + N++
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVAS 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+D RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQSDEARVKSGHDQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 155 PAPANLPVPPYQF 167
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL+ + EGQ + WRGKP++I HR
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHR 79
>gi|324520515|gb|ADY47653.1| Cytochrome b-c1 complex subunit Rieske, partial [Ascaris suum]
Length = 155
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 107/150 (71%), Gaps = 1/150 (0%)
Query: 44 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKE 103
+ ++ AK V I+ + D +A+A V L+ IPEG++ T++W+GKP+F++HRT E
Sbjct: 1 MALLAAKESVQAMIAFKGIARDQMALANTVVQLDEIPEGETKTYEWQGKPVFVKHRTDDE 60
Query: 104 IDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDW-GGYYCPCHGSH 162
I E+ +++QLR PQ D +RV+ WLV++GICTHLGCVPI N+ ++ GGY CPCHG++
Sbjct: 61 IKREKAVDVAQLRHPQHDDERVQRDEWLVLLGICTHLGCVPIPNSDEFPGGYKCPCHGAY 120
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
+DASGRIRKGPAP N+ +PPY I+I
Sbjct: 121 FDASGRIRKGPAPLNLRIPPYTLDGNTIVI 150
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 237 VGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ ++ AK V I+ + D +A+A V L+ IPEG++ T++W+GKP+F++HR
Sbjct: 1 MALLAAKESVQAMIAFKGIARDQMALANTVVQLDEIPEGETKTYEWQGKPVFVKHR 56
>gi|341583589|ref|YP_004764080.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
heilongjiangensis 054]
gi|340807815|gb|AEK74403.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
heilongjiangensis 054]
Length = 177
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
+ ++T R+ F + A + VG C + + S++ SADVLA++++EVDL+ I
Sbjct: 6 ENKNKQTTRRDFIVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSVEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
+ ++T R+ F + A + VG C + + S++ SADVLA++++EVDL+ I
Sbjct: 6 ENKNKQTTRRDFIVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSVEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|389693971|ref|ZP_10182065.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Microvirga
sp. WSM3557]
gi|388587357|gb|EIM27650.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Microvirga
sp. WSM3557]
Length = 182
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 113/170 (66%), Gaps = 7/170 (4%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQSV 85
E R+ F Y+ G ++VVG ++V F+ S++ +A V A A +EVDL I EGQ V
Sbjct: 10 EPTRRDFLYIATGAAAVVG---GATLVWPFVQSLAPDAATVAAGAPVEVDLTPIAEGQIV 66
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGCV 143
WRGK +FIRHRT +EI ++ N++ LRDPQADS RVK WL++ G CTHLGCV
Sbjct: 67 KVFWRGKLIFIRHRTPEEIKAAEDVNVASLRDPQADSARVKPGKAQWLIVYGNCTHLGCV 126
Query: 144 PIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
P+ G++ G++CPCHGS +D SGR+R GPAP N+ +PPY F D I+I
Sbjct: 127 PLGQQGEYHGWFCPCHGSIFDTSGRVRGGPAPINLPIPPYTFTSDTKIVI 176
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQSV 278
E R+ F Y+ G ++VVG ++V F+ S++ +A V A A +EVDL I EGQ V
Sbjct: 10 EPTRRDFLYIATGAAAVVG---GATLVWPFVQSLAPDAATVAAGAPVEVDLTPIAEGQIV 66
Query: 279 TFKWRGKPLFIRHR 292
WRGK +FIRHR
Sbjct: 67 KVFWRGKLIFIRHR 80
>gi|429329989|gb|AFZ81748.1| ubiquinol-cytochrome c reductase, putative [Babesia equi]
Length = 339
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 10/184 (5%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR D R+A Y++ M A+++V + I S DV A
Sbjct: 161 PDFREYRIPNGAD-------RRATIYLMTATVFFFIMAFARTLVCKLIHYFWLSRDVAAS 213
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
+EV++ + G VT KWR KP+FIR RT ++I + + + +RDP+ D DR K+
Sbjct: 214 GALEVNVGQMLPGDQVTVKWRSKPVFIRRRTPEDIARAKKDDELLDSMRDPELDEDRNKN 273
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WL+ IGICTHLGC+P G++GG++CPCHGSHYD SGRIR+GPAP N+EVPPY+F D
Sbjct: 274 PEWLINIGICTHLGCIP-TKGGNYGGFFCPCHGSHYDGSGRIRQGPAPANLEVPPYRFID 332
Query: 188 EGIL 191
+ +
Sbjct: 333 DNTI 336
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR D R+A Y++ M A+++V + I S DV A
Sbjct: 161 PDFREYRIPNGAD-------RRATIYLMTATVFFFIMAFARTLVCKLIHYFWLSRDVAAS 213
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EV++ + G VT KWR KP+FIR R
Sbjct: 214 GALEVNVGQMLPGDQVTVKWRSKPVFIRRR 243
>gi|294887022|ref|XP_002771958.1| ubiquinol-cytochrome c reductase, putative [Perkinsus marinus ATCC
50983]
gi|239875783|gb|EER03774.1| ubiquinol-cytochrome c reductase, putative [Perkinsus marinus ATCC
50983]
Length = 145
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 2/142 (1%)
Query: 53 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNT 110
V + + + + D +A IEVDL I GQ+ KWRGKP+F+R RTQ ID T +
Sbjct: 2 VVKVVHGLWPARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRRTQAMIDAATADDA 61
Query: 111 NISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIR 170
++ LRDP+ D DRVK P WLV++G+CTHLGCVP + G +GGY+CPCHGSHYD SGRIR
Sbjct: 62 IVNSLRDPERDKDRVKKPEWLVMLGVCTHLGCVPYPDQGLYGGYFCPCHGSHYDHSGRIR 121
Query: 171 KGPAPTNMEVPPYQFGDEGILI 192
GPAP NME+P Y+F D+ +I
Sbjct: 122 LGPAPLNMEIPTYEFIDDDTII 143
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 246 VNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V + + + + D +A IEVDL I GQ+ KWRGKP+F+R R
Sbjct: 2 VVKVVHGLWPARDAIAAGVIEVDLRGIQPGQNFVVKWRGKPVFVRRR 48
>gi|15604140|ref|NP_220655.1| cytochrome B6-F complex IRON-sulfur subunit (petA) [Rickettsia
prowazekii str. Madrid E]
gi|383487110|ref|YP_005404790.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. GvV257]
gi|383487688|ref|YP_005405367.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Chernikova]
gi|383488534|ref|YP_005406212.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Katsinyian]
gi|383489375|ref|YP_005407052.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Dachau]
gi|383499512|ref|YP_005412873.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500350|ref|YP_005413710.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. RpGvF24]
gi|386082104|ref|YP_005998681.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
prowazekii str. Rp22]
gi|13124628|sp|Q9ZDQ5.1|UCRI_RICPR RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|3860832|emb|CAA14732.1| CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT (petA) [Rickettsia
prowazekii str. Madrid E]
gi|292571868|gb|ADE29783.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
prowazekii str. Rp22]
gi|380757475|gb|AFE52712.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. GvV257]
gi|380758047|gb|AFE53283.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. RpGvF24]
gi|380760567|gb|AFE49089.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Chernikova]
gi|380761413|gb|AFE49934.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Katsinyian]
gi|380762258|gb|AFE50778.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763098|gb|AFE51617.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
prowazekii str. Dachau]
Length = 177
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG CA I S + SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSFNPSADVLALSSIEVDLSNIAI 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT EI + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+++ G++ G++CPCHGS YD+SGR+RKGPAP N+ VPPY F
Sbjct: 123 LGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIF 168
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG CA I S + SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSFNPSADVLALSSIEVDLSNIAI 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>gi|402703853|ref|ZP_10851832.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
helvetica C9P9]
Length = 177
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 115/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEPDEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLVVPPYTF 168
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG C + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|378764102|ref|YP_005192718.1| fbcF ubiquinol-cytochrome C reductase iron-sulfur subunit
[Sinorhizobium fredii HH103]
gi|365183730|emb|CCF00579.1| fbcF ubiquinol-cytochrome C reductase iron-sulfur subunit
[Sinorhizobium fredii HH103]
Length = 205
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 113/174 (64%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y++ + VVG+ A FI M A LAMA+IEVD++ + EG S+T
Sbjct: 26 EPSRRDFLYLVTTMAGVVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLVEGMSLT 82
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------PSWL 131
KWR +P+FIR+RTQ+EI+ + T + L+DP A + + D +W+
Sbjct: 83 VKWRSRPVFIRNRTQQEIEAARATALDDLKDPLARNANLADDQPATDNARSAGEGKENWI 142
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G+CTHLGCVP+ AG++GG++CPCHGSHYD +GR+RKGPAP N+ +P ++F
Sbjct: 143 VMVGVCTHLGCVPLGQAGEFGGWFCPCHGSHYDTAGRVRKGPAPENLAIPNFEF 196
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y++ + VVG+ A FI M A LAMA+IEVD++ + EG S+T
Sbjct: 26 EPSRRDFLYLVTTMAGVVGVGAASW---PFIDQMRPDASTLAMASIEVDVSSLVEGMSLT 82
Query: 280 FKWRGKPLFIRHR 292
KWR +P+FIR+R
Sbjct: 83 VKWRSRPVFIRNR 95
>gi|398829018|ref|ZP_10587218.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Phyllobacterium sp. YR531]
gi|398217876|gb|EJN04393.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Phyllobacterium sp. YR531]
Length = 187
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 112/174 (64%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VG+ + FI M A LA+++IEVD++ + G S+T
Sbjct: 8 EPTRRDFLYIATGMAGAVGV---GAFAWPFIDQMRPDASTLAVSSIEVDVSALTPGMSLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRV---KDPSWL 131
KWRGKP+FIR+RT KE++ + +S+L+DP A D+DR + +WL
Sbjct: 65 VKWRGKPIFIRNRTPKEVEEAKAVELSELKDPIARNANLPSDAQATDADRTAVKEKENWL 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G+CTHLGC+P+ GD+GG++CPCHGSHYD +GRIRKGPAP N+ VPP F
Sbjct: 125 VMVGVCTHLGCIPLGQQGDFGGWFCPCHGSHYDTAGRIRKGPAPENLPVPPLSF 178
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VG+ + FI M A LA+++IEVD++ + G S+T
Sbjct: 8 EPTRRDFLYIATGMAGAVGV---GAFAWPFIDQMRPDASTLAVSSIEVDVSALTPGMSLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPIFIRNR 77
>gi|117923673|ref|YP_864290.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Magnetococcus marinus MC-1]
gi|117607429|gb|ABK42884.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Magnetococcus marinus MC-1]
Length = 178
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID-TEQNTNISQ 114
FI S S SADVL++AT EV + I EGQ +T W+GKP+FI HR ++I+ + + +
Sbjct: 34 FIDSWSPSADVLSLATTEVSVAAIAEGQMITTMWQGKPVFILHRNAEQIERAKTDDKATD 93
Query: 115 LRDPQADSDRVKDPSWLVIIGICTHLGCVPIA-NAGDWGGYYCPCHGSHYDASGRIRKGP 173
L DPQAD+DRVK WL+++ ICTHLGCVP GD+GG+ CPCHGSHYD SGRIRKGP
Sbjct: 94 LVDPQADADRVKKDEWLIVLAICTHLGCVPQPIGTGDFGGFLCPCHGSHYDTSGRIRKGP 153
Query: 174 APTNMEVPPYQFGDEGILI 192
AP N+EVP Y+F D+ +I
Sbjct: 154 APRNLEVPYYEFKDDETVI 172
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI S S SADVL++AT EV + I EGQ +T W+GKP+FI HR
Sbjct: 34 FIDSWSPSADVLSLATTEVSVAAIAEGQMITTMWQGKPVFILHR 77
>gi|254501670|ref|ZP_05113821.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Labrenzia
alexandrii DFL-11]
gi|222437741|gb|EEE44420.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Labrenzia
alexandrii DFL-11]
Length = 186
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 112/178 (62%), Gaps = 17/178 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
Q E R+ F Y+ G VVG A ++V FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGVVG---AGALVWPFIDQMNPDASALALASIEVDVSAVEEGQS 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--------------DPSW 130
++ KWRGKP+FIR+RT E++ +S L DP A + + +
Sbjct: 63 ISVKWRGKPVFIRNRTDAEVEDANAVAVSDLPDPLARNANLPADAEATDVNRGIEGNEKL 122
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
LV +GICTHLGCVP+ +AG++GG++CPCHGSHYD +GRIRKGPAP N+ +PP + E
Sbjct: 123 LVQVGICTHLGCVPVGDAGEYGGWFCPCHGSHYDTAGRIRKGPAPENLLIPPLEMVSE 180
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
Q E R+ F Y+ G VVG A ++V FI M+ A LA+A+IEVD++ + EGQS
Sbjct: 6 QAEPTRRDFLYIATGAMGVVG---AGALVWPFIDQMNPDASALALASIEVDVSAVEEGQS 62
Query: 278 VTFKWRGKPLFIRHR 292
++ KWRGKP+FIR+R
Sbjct: 63 ISVKWRGKPVFIRNR 77
>gi|114568739|ref|YP_755419.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Maricaulis
maris MCS10]
gi|114339201|gb|ABI64481.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Maricaulis
maris MCS10]
Length = 175
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 111/166 (66%), Gaps = 9/166 (5%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
E+ R+ F Y+ A G +VVG+ + F+ S + +AD LA T EVD++ + G+ V
Sbjct: 3 EQKTRRDFIYIAATGGTVVGIGLSAW---PFLDSFNPAADTLAAGTTEVDVSALEPGERV 59
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQ-NTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVP 144
T WR +P+FI RT + + + + + L DP+ D+DRVKD WLV+IG+CTHLGCVP
Sbjct: 60 TVAWRERPVFIERRTPQTLALARADDDDPNLIDPEIDADRVKDEEWLVVIGVCTHLGCVP 119
Query: 145 IA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ N G +GG+YCPCHGS YD SGR+R+GPAPTN+E+PPYQF
Sbjct: 120 LGQSAGDNRGRFGGWYCPCHGSVYDVSGRVRRGPAPTNLEIPPYQF 165
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
E+ R+ F Y+ A G +VVG+ + F+ S + +AD LA T EVD++ + G+ V
Sbjct: 3 EQKTRRDFIYIAATGGTVVGIGLSAW---PFLDSFNPAADTLAAGTTEVDVSALEPGERV 59
Query: 279 TFKWRGKPLFIRHR 292
T WR +P+FI R
Sbjct: 60 TVAWRERPVFIERR 73
>gi|239947768|ref|ZP_04699521.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922044|gb|EER22068.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 177
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG C + I S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLIDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKVGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VP Y F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPSYTF 168
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG C + I S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAACT---LWPLIDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>gi|158425125|ref|YP_001526417.1| ubiquinol-cytochrome c reductase [Azorhizobium caulinodans ORS 571]
gi|158332014|dbj|BAF89499.1| ubiquinol-cytochrome c reductase [Azorhizobium caulinodans ORS 571]
Length = 179
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 102/140 (72%), Gaps = 3/140 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+S + A VLA++T EVDL I EGQ VT +WRGKP+FI +R K+++ + ++QL
Sbjct: 39 FVSQLQPDASVLALSTTEVDLTPIAEGQIVTTQWRGKPIFIFNRAPKDVEAARAVPLTQL 98
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
DPQ D DRVK +WLV+IGICTHLGCVP+ + G++ G++CPCHGS YD+SGR+R GP
Sbjct: 99 LDPQRDQDRVKTGHDNWLVVIGICTHLGCVPLGHQGNYDGWFCPCHGSQYDSSGRVRVGP 158
Query: 174 APTNMEVPPYQF-GDEGILI 192
AP N+ VPPY F D I+I
Sbjct: 159 APLNLAVPPYNFVSDSKIVI 178
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+S + A VLA++T EVDL I EGQ VT +WRGKP+FI +R
Sbjct: 39 FVSQLQPDASVLALSTTEVDLTPIAEGQIVTTQWRGKPIFIFNR 82
>gi|221233442|ref|YP_002515878.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Caulobacter
crescentus NA1000]
gi|220962614|gb|ACL93970.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Caulobacter
crescentus NA1000]
Length = 183
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ SAD LAMA+ E DL +PEGQ VT KWRGKPLF+R+RT+ EID + +
Sbjct: 43 FIDQMNPSADTLAMASTEFDLTKVPEGQQVTLKWRGKPLFVRNRTKGEIDKAVADDTVSM 102
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DPQ D+DRVK WLV+IG CTHLGCVP GD+GG++CPCHGSHYD SGRIRKGP
Sbjct: 103 KDPQKDADRVKPGKAQWLVLIGSCTHLGCVPTFGGGDFGGWFCPCHGSHYDTSGRIRKGP 162
Query: 174 APTNMEVPPYQF 185
AP N+ VP Y+F
Sbjct: 163 APLNLAVPEYEF 174
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ SAD LAMA+ E DL +PEGQ VT KWRGKPLF+R+R
Sbjct: 43 FIDQMNPSADTLAMASTEFDLTKVPEGQQVTLKWRGKPLFVRNR 86
>gi|402852026|ref|ZP_10900136.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
gi|402497710|gb|EJW09512.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
Length = 189
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 112/170 (65%), Gaps = 7/170 (4%)
Query: 19 RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLN 77
+NP + + R+ F Y+ G VG V V +SSM+ +A V A A IEVDL
Sbjct: 10 QNP-QNSGDASRRDFLYVATG---AVGAVGTALTVWPLLSSMNPDAATVAAGAPIEVDLT 65
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIG 135
I EGQ V WR KP+FI HRT +E+ ++T ++QL DP +D+DR K WLV+IG
Sbjct: 66 PIAEGQIVKVTWRSKPIFIFHRTAEEVAAARDTPLNQLPDPASDADRTKPGHEPWLVVIG 125
Query: 136 ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
ICTHLGC+PI + G +GG++CPCHGS YD +GRIR+GPAP N+++PPY F
Sbjct: 126 ICTHLGCIPIGHEGAYGGWFCPCHGSVYDTAGRIRQGPAPRNLDLPPYSF 175
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 212 RNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLN 270
+NP + + R+ F Y+ G VG V V +SSM+ +A V A A IEVDL
Sbjct: 10 QNP-QNSGDASRRDFLYVATG---AVGAVGTALTVWPLLSSMNPDAATVAAGAPIEVDLT 65
Query: 271 LIPEGQSVTFKWRGKPLFIRHR 292
I EGQ V WR KP+FI HR
Sbjct: 66 PIAEGQIVKVTWRSKPIFIFHR 87
>gi|254995088|ref|ZP_05277278.1| cytochrome B6-F complex iron-sulfur subunit [Anaplasma marginale
str. Mississippi]
gi|255003252|ref|ZP_05278216.1| cytochrome B6-F complex iron-sulfur subunit [Anaplasma marginale
str. Puerto Rico]
gi|255004379|ref|ZP_05279180.1| cytochrome B6-F complex iron-sulfur subunit [Anaplasma marginale
str. Virginia]
Length = 187
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 9/170 (5%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
E +R+ F G + + M C A S V + S++ SADV+A ATIEVDL+ I EG +
Sbjct: 13 EMKRRDFL-----GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGST 67
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS--WLVIIGICTHLGC 142
KW+GKP+FIR RT +EI+ + N++ LRDPQ+D R + S WL+++GICTHLGC
Sbjct: 68 KVVKWQGKPVFIRRRTAEEIEDARAVNVADLRDPQSDQQRTRQESGEWLIVLGICTHLGC 127
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
VP+ G+YCPCHGS YD SGR+ GPAP N+ VP Y F D+ ++
Sbjct: 128 VPVEVKDGTKGWYCPCHGSKYDTSGRVVAGPAPLNLSVPDYYFPDDSTVV 177
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
E +R+ F G + + M C A S V + S++ SADV+A ATIEVDL+ I EG +
Sbjct: 13 EMKRRDFL-----GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGST 67
Query: 278 VTFKWRGKPLFIRHR 292
KW+GKP+FIR R
Sbjct: 68 KVVKWQGKPVFIRRR 82
>gi|56416900|ref|YP_153974.1| cytochrome B6-F complex iron-sulfur subunit [Anaplasma marginale
str. St. Maries]
gi|56388132|gb|AAV86719.1| cytochrome B6-F complex iron-sulfur subunit [Anaplasma marginale
str. St. Maries]
Length = 174
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 40 GSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 97
G + + M C A S V + S++ SADV+A ATIEVDL+ I EG + KW+GKP+FIR
Sbjct: 8 GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGSTKVVKWQGKPVFIR 67
Query: 98 HRTQKEIDTEQNTNISQLRDPQADSDRVKDPS--WLVIIGICTHLGCVPIANAGDWGGYY 155
RT +EI+ + N++ LRDPQ+D R + S WL+++GICTHLGCVP+ G+Y
Sbjct: 68 RRTAEEIEDARAVNVADLRDPQSDQQRTRQESGEWLIVLGICTHLGCVPVEVKDGTKGWY 127
Query: 156 CPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
CPCHGS YD SGR+ GPAP N+ VP Y F D+ ++
Sbjct: 128 CPCHGSKYDTSGRVVAGPAPLNLSVPDYYFPDDSTVV 164
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 233 GSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
G + + M C A S V + S++ SADV+A ATIEVDL+ I EG + KW+GKP+FIR
Sbjct: 8 GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGSTKVVKWQGKPVFIR 67
Query: 291 HR 292
R
Sbjct: 68 RR 69
>gi|16124727|ref|NP_419291.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Caulobacter
crescentus CB15]
gi|13421647|gb|AAK22459.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
crescentus CB15]
Length = 178
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/132 (62%), Positives = 98/132 (74%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ SAD LAMA+ E DL +PEGQ VT KWRGKPLF+R+RT+ EID + +
Sbjct: 38 FIDQMNPSADTLAMASTEFDLTKVPEGQQVTLKWRGKPLFVRNRTKGEIDKAVADDTVSM 97
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DPQ D+DRVK WLV+IG CTHLGCVP GD+GG++CPCHGSHYD SGRIRKGP
Sbjct: 98 KDPQKDADRVKPGKAQWLVLIGSCTHLGCVPTFGGGDFGGWFCPCHGSHYDTSGRIRKGP 157
Query: 174 APTNMEVPPYQF 185
AP N+ VP Y+F
Sbjct: 158 APLNLAVPEYEF 169
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ SAD LAMA+ E DL +PEGQ VT KWRGKPLF+R+R
Sbjct: 38 FIDQMNPSADTLAMASTEFDLTKVPEGQQVTLKWRGKPLFVRNR 81
>gi|75676801|ref|YP_319222.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
winogradskyi Nb-255]
gi|74421671|gb|ABA05870.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
winogradskyi Nb-255]
Length = 175
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ V A A IEVDL+ I EGQ + WRGKP+FI HRT+K+I+ +N N++ L DPQ DS
Sbjct: 42 ASTVAAGAPIEVDLSPIAEGQDIKVFWRGKPIFISHRTKKQIEEARNVNVASLPDPQPDS 101
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK+ WLV+IGICTHLGCVPIA+ G + G++CPCHGS YD SGRIR+GPAP+N+ V
Sbjct: 102 ARVKEGHDQWLVVIGICTHLGCVPIAHEGAYDGFFCPCHGSVYDTSGRIRQGPAPSNLPV 161
Query: 181 PPYQF 185
PPY F
Sbjct: 162 PPYAF 166
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ V A A IEVDL+ I EGQ + WRGKP+FI HR
Sbjct: 42 ASTVAAGAPIEVDLSPIAEGQDIKVFWRGKPIFISHR 78
>gi|163796243|ref|ZP_02190204.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [alpha
proteobacterium BAL199]
gi|159178385|gb|EDP62927.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [alpha
proteobacterium BAL199]
Length = 176
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 100/141 (70%), Gaps = 5/141 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ M+ +ADVLA+A+IE D + EG +VT KWRGKP+F+RHRT EI+ + ++ L
Sbjct: 33 FVDQMNPAADVLALASIEFDTATVTEGMAVTVKWRGKPVFVRHRTPDEIEKARAVPLADL 92
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
DP AD+ R P L+++G+CTHLGCVP+ GD+GG++CPCHGSHYD +GRIR
Sbjct: 93 PDPAADATRALKPEQLIVVGVCTHLGCVPLGQKPSDPRGDYGGWFCPCHGSHYDTAGRIR 152
Query: 171 KGPAPTNMEVPPYQFGDEGIL 191
KGPAP N+ VP YQ+ + ++
Sbjct: 153 KGPAPKNLVVPDYQYVSDTVV 173
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ M+ +ADVLA+A+IE D + EG +VT KWRGKP+F+RHR
Sbjct: 33 FVDQMNPAADVLALASIEFDTATVTEGMAVTVKWRGKPVFVRHR 76
>gi|71029814|ref|XP_764550.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Theileria
parva strain Muguga]
gi|68351504|gb|EAN32267.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit, putative
[Theileria parva]
Length = 339
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 113/184 (61%), Gaps = 10/184 (5%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR R T RKA Y++ +S++ + + + DV+A
Sbjct: 161 PDFREYRLPRG-------TDRKATIYLMTATFFFFFFAFLRSLICKVVHYFWLTRDVVAA 213
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
++EV++ + G +T KWR KP+FIR RT +EI + + +RDP DS+R +
Sbjct: 214 GSVEVNVGQMLPGDQITVKWRNKPVFIRRRTPEEIARAKKDDALFDTMRDPAIDSERNVN 273
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV IG+CTHLGC+P G++GG+YCPCHGSHYD+SGRIR GPAP N+EVPPY+F D
Sbjct: 274 PEWLVNIGVCTHLGCIP-TRGGNYGGFYCPCHGSHYDSSGRIRLGPAPANLEVPPYKFID 332
Query: 188 EGIL 191
+ +
Sbjct: 333 DNTI 336
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR R T RKA Y++ +S++ + + + DV+A
Sbjct: 161 PDFREYRLPRG-------TDRKATIYLMTATFFFFFFAFLRSLICKVVHYFWLTRDVVAA 213
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++EV++ + G +T KWR KP+FIR R
Sbjct: 214 GSVEVNVGQMLPGDQITVKWRNKPVFIRRR 243
>gi|452965639|gb|EME70659.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Magnetospirillum sp. SO-1]
Length = 133
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 93/124 (75%), Gaps = 5/124 (4%)
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK 126
+A++T +VD++ I GQSVT WRGKP+F+RHR +EI N + LR+P+ D+ R K
Sbjct: 1 MALSTTDVDISAIKPGQSVTVVWRGKPVFVRHRLPEEIADAAKVNTADLREPETDTQRAK 60
Query: 127 DPSWLVIIGICTHLGCVPIAN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
P WLV+IG+CTHLGCVP+ G++GG++CPCHGSHYD SGRIRKGPAP+N+ VP
Sbjct: 61 KPEWLVLIGVCTHLGCVPLGQKPADPKGEFGGWFCPCHGSHYDTSGRIRKGPAPSNLPVP 120
Query: 182 PYQF 185
PYQF
Sbjct: 121 PYQF 124
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A++T +VD++ I GQSVT WRGKP+F+RHR
Sbjct: 1 MALSTTDVDISAIKPGQSVTVVWRGKPVFVRHR 33
>gi|407976977|ref|ZP_11157871.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Nitratireductor indicus C115]
gi|407427590|gb|EKF40280.1| Ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Nitratireductor indicus C115]
Length = 180
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 114/169 (67%), Gaps = 9/169 (5%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
++ F Y+ G VVG+ + FI SM+ SA + ++AT+E+ L I GQ VT W
Sbjct: 14 KRDFIYVATGAMVVVGV---GAFAWPFIDSMNPSASIRSLATVEIPLGGIEVGQRVTVMW 70
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANA- 148
RG+P+F+ RT+ +ID + + L DPQ+D+DRV++P WL+++G+CTHLGC+P+
Sbjct: 71 RGRPVFVDRRTEAQIDAAVADDDADLIDPQSDADRVQNPEWLIVVGVCTHLGCIPLGQKD 130
Query: 149 ----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD-EGILI 192
G+WGG+YCPCHGS YD SGR+R+GPAP N+ VPPY+ D E ++I
Sbjct: 131 SDPRGNWGGWYCPCHGSQYDTSGRVRRGPAPKNLVVPPYELMDGEKVII 179
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
++ F Y+ G VVG+ + FI SM+ SA + ++AT+E+ L I GQ VT W
Sbjct: 14 KRDFIYVATGAMVVVGV---GAFAWPFIDSMNPSASIRSLATVEIPLGGIEVGQRVTVMW 70
Query: 283 RGKPLFIRHR 292
RG+P+F+ R
Sbjct: 71 RGRPVFVDRR 80
>gi|269958686|ref|YP_003328473.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Anaplasma
centrale str. Israel]
gi|269848515|gb|ACZ49159.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Anaplasma
centrale str. Israel]
Length = 203
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 9/170 (5%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
E +R+ F G + + M C A S V + S++ SADV+A ATIEVDL+ I EG +
Sbjct: 29 EMKRRDFL-----GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGST 83
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS--WLVIIGICTHLGC 142
KW+GKP+FIR RT +EI+ + N++ LRDPQ+D R + S WL+++GICTHLGC
Sbjct: 84 KVVKWQGKPVFIRRRTAEEIEDARAVNVADLRDPQSDQQRTRQESGEWLIVLGICTHLGC 143
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
VP+ G+YCPCHGS YD SGR+ GPAP N+ VP Y F D+ ++
Sbjct: 144 VPVEVKDGTKGWYCPCHGSKYDTSGRVVAGPAPLNLSVPDYYFPDDSTVV 193
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 7/75 (9%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
E +R+ F G + + M C A S V + S++ SADV+A ATIEVDL+ I EG +
Sbjct: 29 EMKRRDFL-----GLTTLSMACMGAASFVYPLVESLNPSADVMAHATIEVDLSGIKEGST 83
Query: 278 VTFKWRGKPLFIRHR 292
KW+GKP+FIR R
Sbjct: 84 KVVKWQGKPVFIRRR 98
>gi|39934267|ref|NP_946543.1| cytochrome b6-F complex iron-sulfur subunit [Rhodopseudomonas
palustris CGA009]
gi|39648115|emb|CAE26635.1| cytochrome b6-F complex iron-sulfur subunit [Rhodopseudomonas
palustris CGA009]
Length = 208
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +RT+K+++ +NT +S
Sbjct: 67 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNRTKKQVEEARNTPLSD 126
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L+DPQ D R K+ +WLV++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+G
Sbjct: 127 LKDPQTDQARTKEGHENWLVVVGICTHLGCIPIAHEGKYDGFFCPCHGSQYDSSGRIRQG 186
Query: 173 PAPTNMEVPPYQF 185
PAP N+ +PPYQF
Sbjct: 187 PAPLNLPIPPYQF 199
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +R
Sbjct: 67 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNR 111
>gi|347529812|ref|YP_004836560.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
sp. SYK-6]
gi|345138494|dbj|BAK68103.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
sp. SYK-6]
Length = 188
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 112/175 (64%), Gaps = 11/175 (6%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
E +R+ F + A + VG + +V+ I+ M+ SADVLA AT EVDL+ I EGQ++
Sbjct: 16 EGVRRRDFINIAAVSFAGVGGL---AVLAPLINQMNPSADVLAQATTEVDLSAIAEGQAI 72
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCV 143
+R +PLF+RH T KEI + S LRDPQ +R D WLV +G+CTHLGCV
Sbjct: 73 KAVFRSQPLFVRHLTAKEIAEADAVDPSSLRDPQTLEERTVDGKKQWLVTMGVCTHLGCV 132
Query: 144 PIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
P+ N G++GGY+CPCHGSHYD + RIRKGPAP N+ VP YQF D IL+
Sbjct: 133 PLGAGEGENRGEFGGYFCPCHGSHYDTAARIRKGPAPLNLLVPTYQFTSDTAILV 187
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
E +R+ F + A + VG + +V+ I+ M+ SADVLA AT EVDL+ I EGQ++
Sbjct: 16 EGVRRRDFINIAAVSFAGVGGL---AVLAPLINQMNPSADVLAQATTEVDLSAIAEGQAI 72
Query: 279 TFKWRGKPLFIRH 291
+R +PLF+RH
Sbjct: 73 KAVFRSQPLFVRH 85
>gi|58584663|ref|YP_198236.1| Rieske Fe-S protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58418979|gb|AAW70994.1| Rieske Fe-S protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 200
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 124/194 (63%), Gaps = 10/194 (5%)
Query: 5 SDIRTPDFSKYRRDRNPDKG--QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 62
++ + P K + P KG ++ R+ F + + +G V S + I SM+
Sbjct: 6 TENKKPLVDKEDKKTPPVKGFTKKNKSRRDFITLTTCAMASIGTV---SGLWPLIKSMNP 62
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
SA+VLAM+T+EV+L+ I EG + KW+GKP+FIR RT++EI + N+ LRDPQ+D
Sbjct: 63 SAEVLAMSTVEVNLSGIQEGHGIKVKWQGKPVFIRRRTKQEIKAARVVNVEDLRDPQSDE 122
Query: 123 DRV---KDPSWLVIIGICTHLGCVPIANA-GDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
RV KD WL+++G+CTHLGCVP+ +A D G++CPCHGS+YD SGR+ GPAP NM
Sbjct: 123 QRVHKGKD-EWLIMVGVCTHLGCVPVEHATKDGNGWFCPCHGSYYDTSGRVIGGPAPKNM 181
Query: 179 EVPPYQFGDEGILI 192
VP Y F +E +++
Sbjct: 182 VVPDYFFPNENVVV 195
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 198 SDIRTPDFSKYRRDRNPDKG--QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA 255
++ + P K + P KG ++ R+ F + + +G V S + I SM+
Sbjct: 6 TENKKPLVDKEDKKTPPVKGFTKKNKSRRDFITLTTCAMASIGTV---SGLWPLIKSMNP 62
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SA+VLAM+T+EV+L+ I EG + KW+GKP+FIR R
Sbjct: 63 SAEVLAMSTVEVNLSGIQEGHGIKVKWQGKPVFIRRR 99
>gi|357977453|ref|ZP_09141424.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
sp. KC8]
Length = 209
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 105/152 (69%), Gaps = 7/152 (4%)
Query: 47 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT 106
V A +VV ++ M+ SADVLA+A+IEVD++ I EGQ++ +R +PLFIRH T KEI
Sbjct: 55 VGAATVVLPLVNQMNPSADVLALASIEVDVSKITEGQAIKTIFRKQPLFIRHLTGKEISE 114
Query: 107 EQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCH 159
+ LRDPQ ++R K+ WL+ +G+CTHLGCVP+ N G++GGY+CPCH
Sbjct: 115 ANAVPVDSLRDPQTLAERTKEGKEQWLITMGVCTHLGCVPLGAGEGENRGEFGGYFCPCH 174
Query: 160 GSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
GSHYD + RIRKGPAPTN+ VP Y F + ++
Sbjct: 175 GSHYDTAARIRKGPAPTNLVVPEYAFKSDTVV 206
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 240 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
V A +VV ++ M+ SADVLA+A+IEVD++ I EGQ++ +R +PLFIRH
Sbjct: 55 VGAATVVLPLVNQMNPSADVLALASIEVDVSKITEGQAIKTIFRKQPLFIRH 106
>gi|84997631|ref|XP_953537.1| ubiquinol-cytochrome c reductase [Theileria annulata strain Ankara]
gi|65304533|emb|CAI76912.1| ubiquinol-cytochrome c reductase, putative [Theileria annulata]
Length = 351
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 116/196 (59%), Gaps = 22/196 (11%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR R T RKA Y++ + +S V +F+ S DV A
Sbjct: 161 PDFREYRLPRG-------TNRKATIYLMTATAFFFLFAFLRSSVCKFVHFFWLSKDVAAA 213
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKD 127
T+EV+++ + G +T KWR KP+FIR RT +EI + + ++RDPQ DS+R +
Sbjct: 214 GTVEVNVSQMLPGDQITVKWRNKPVFIRRRTAEEIARAKKDDELYDKMRDPQLDSERNVN 273
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDAS------------GRIRKGPAP 175
P WLV IG+CTHLGC+P G++GG++CPCHGSHYD+S GRIR GPAP
Sbjct: 274 PEWLVNIGVCTHLGCIP-GRGGNYGGFFCPCHGSHYDSSGITNFLMIILILGRIRLGPAP 332
Query: 176 TNMEVPPYQFGDEGIL 191
N+EVPPY+F DE +
Sbjct: 333 ANLEVPPYKFIDENTI 348
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR R T RKA Y++ + +S V +F+ S DV A
Sbjct: 161 PDFREYRLPRG-------TNRKATIYLMTATAFFFLFAFLRSSVCKFVHFFWLSKDVAAA 213
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T+EV+++ + G +T KWR KP+FIR R
Sbjct: 214 GTVEVNVSQMLPGDQITVKWRNKPVFIRRR 243
>gi|381168404|ref|ZP_09877600.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Phaeospirillum molischianum DSM 120]
gi|380682554|emb|CCG42418.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Phaeospirillum molischianum DSM 120]
Length = 180
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 97/135 (71%), Gaps = 5/135 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ SM+ +AD A++T+EVDL+ I GQSVT WRG+P+FIRHRT +EI + L
Sbjct: 37 LVDSMNPAADTQAISTVEVDLSQIAVGQSVTVTWRGRPVFIRHRTPEEIAQAVKDDSVSL 96
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIR 170
RD Q D+ RV+ P WL+++GICTHLGC+P+ G++GG++CPCHGS YD SGR R
Sbjct: 97 RDQQTDAVRVQRPDWLIVVGICTHLGCIPLGQKPGEPRGEFGGWFCPCHGSQYDTSGRAR 156
Query: 171 KGPAPTNMEVPPYQF 185
KGPAP+N+ VPPY F
Sbjct: 157 KGPAPSNLVVPPYAF 171
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ SM+ +AD A++T+EVDL+ I GQSVT WRG+P+FIRHR
Sbjct: 37 LVDSMNPAADTQAISTVEVDLSQIAVGQSVTVTWRGRPVFIRHR 80
>gi|456357104|dbj|BAM91549.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agromonas
oligotrophica S58]
Length = 148
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HRT+K++D + +S
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLAPVAEGQDIKVFWRGKPIYISHRTKKQVDEVRAVPVSS 66
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP +D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGR+R+G
Sbjct: 67 LPDPASDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRVRQG 126
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 127 PAPLNLPVPPYQF 139
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HR
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLAPVAEGQDIKVFWRGKPIYISHR 51
>gi|192289794|ref|YP_001990399.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Rhodopseudomonas palustris TIE-1]
gi|192283543|gb|ACE99923.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris TIE-1]
Length = 175
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +RT+K+++ +NT +S
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNRTKKQVEEARNTPLSD 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L+DPQ D R K+ +WLV++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+G
Sbjct: 94 LKDPQTDQARTKEGHENWLVVVGICTHLGCIPIAHEGKYDGFFCPCHGSQYDSSGRIRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ +PPYQF
Sbjct: 154 PAPLNLPIPPYQF 166
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +R
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNR 78
>gi|384221011|ref|YP_005612177.1| rieske iron-sulfur protein [Bradyrhizobium japonicum USDA 6]
gi|354959910|dbj|BAL12589.1| rieske iron-sulfur protein [Bradyrhizobium japonicum USDA 6]
Length = 138
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ + A A IEVDL+ I EGQ + WRGKP+++ HRT+K+ID + N++ L DPQ+D
Sbjct: 5 ASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYVSHRTKKQIDEARAVNVASLPDPQSDE 64
Query: 123 DRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+GPAP N+ V
Sbjct: 65 ARVKPGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPV 124
Query: 181 PPYQF 185
PPYQF
Sbjct: 125 PPYQF 129
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ + A A IEVDL+ I EGQ + WRGKP+++ HR
Sbjct: 5 ASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYVSHR 41
>gi|365901829|ref|ZP_09439655.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. STM
3843]
gi|365417439|emb|CCE12197.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. STM
3843]
Length = 148
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL+ + EGQ + WRGKP++I HRT+K+++ ++ +S
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHRTKKQVEEVRSVPLSN 66
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGRIR+G
Sbjct: 67 LPDPATDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRIRQG 126
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 127 PAPLNLPVPPYQF 139
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL+ + EGQ + WRGKP++I HR
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHR 51
>gi|398821675|ref|ZP_10580110.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. YR681]
gi|398227668|gb|EJN13855.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Bradyrhizobium sp. YR681]
Length = 138
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 95/125 (76%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ + A A IEVDL+ + EGQ + WRGKP++I HRT+K+ID + N++ L DPQ D
Sbjct: 5 ASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQTDE 64
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+GPAP N+ V
Sbjct: 65 ARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPV 124
Query: 181 PPYQF 185
PPYQF
Sbjct: 125 PPYQF 129
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ + A A IEVDL+ + EGQ + WRGKP++I HR
Sbjct: 5 ASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHR 41
>gi|148253797|ref|YP_001238382.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146405970|gb|ABQ34476.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
Length = 148
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HRT+K+++ + +S
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQVEEVRKVPVSS 66
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGR+R+G
Sbjct: 67 LIDPATDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRVRQG 126
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 127 PAPLNLPVPPYQF 139
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HR
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHR 51
>gi|316932737|ref|YP_004107719.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris DX-1]
gi|315600451|gb|ADU42986.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris DX-1]
Length = 181
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 101/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +RT+K++D +NT ++
Sbjct: 40 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNRTKKQVDEARNTPLAD 99
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L+DP+ D R K+ +WLV++GICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 100 LKDPETDQARTKEGHENWLVVVGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 159
Query: 173 PAPTNMEVPPYQF 185
PAP N+ +PPYQF
Sbjct: 160 PAPLNLPIPPYQF 172
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL I EGQ + WRG+P++I +R
Sbjct: 40 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIYIMNR 84
>gi|146339027|ref|YP_001204075.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. ORS 278]
gi|146191833|emb|CAL75838.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 278]
Length = 148
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HRT+K+++ ++ +S
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHRTKKQVEEVRSVPVSS 66
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGR+R+G
Sbjct: 67 LPDPATDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRVRQG 126
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 127 PAPLNLPVPPYQF 139
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HR
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHR 51
>gi|299134647|ref|ZP_07027839.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Afipia sp.
1NLS2]
gi|298590457|gb|EFI50660.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Afipia sp.
1NLS2]
Length = 176
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ A +A A IEVDL+ I EGQ + WRGKP++I +RT+K+I+ ++ N+S
Sbjct: 35 LISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNRTKKQIEEARSVNVSS 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D RVK+ +WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQTDQSRVKEGHDNWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPY F
Sbjct: 155 PAPLNLYVPPYNF 167
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ A +A A IEVDL+ I EGQ + WRGKP++I +R
Sbjct: 35 LISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNR 79
>gi|414170348|ref|ZP_11425962.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia
clevelandensis ATCC 49720]
gi|410885020|gb|EKS32840.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia
clevelandensis ATCC 49720]
Length = 212
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ A +A A IEVDL+ I GQ + WRGKP++I +RT+K+ID ++ N+S
Sbjct: 71 LISQMNPDASTIAAGAPIEVDLSPIATGQDIKVFWRGKPIYIMNRTKKQIDEARSVNVSS 130
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D RVK+ WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 131 LPDPQTDQSRVKEGHDQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 190
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPY F
Sbjct: 191 PAPLNLAVPPYAF 203
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ A +A A IEVDL+ I GQ + WRGKP++I +R
Sbjct: 71 LISQMNPDASTIAAGAPIEVDLSPIATGQDIKVFWRGKPIYIMNR 115
>gi|414163410|ref|ZP_11419657.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia felis
ATCC 53690]
gi|410881190|gb|EKS29030.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia felis
ATCC 53690]
Length = 176
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ A +A A IEVDL+ I EGQ + WRGKP++I +RT+K+I+ ++ N+S
Sbjct: 35 LISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNRTKKQIEEARSVNVSS 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D RVK+ +WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQTDQSRVKEGHDNWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPY F
Sbjct: 155 PAPLNLYVPPYNF 167
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ A +A A IEVDL+ I EGQ + WRGKP++I +R
Sbjct: 35 LISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNR 79
>gi|51473467|ref|YP_067224.1| complex III (mitochondrial electron transport) [Rickettsia typhi
str. Wilmington]
gi|383752241|ref|YP_005427341.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
typhi str. TH1527]
gi|383843077|ref|YP_005423580.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
typhi str. B9991CWPP]
gi|81610811|sp|Q68XA0.1|UCRI_RICTY RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|51459779|gb|AAU03742.1| Complex III (mitochondrial electron transport) [Rickettsia typhi
str. Wilmington]
gi|380758884|gb|AFE54119.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
typhi str. TH1527]
gi|380759724|gb|AFE54958.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rickettsia
typhi str. B9991CWPP]
Length = 177
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG CA I S++ S DVLA+++IEVDL+ I
Sbjct: 6 DNRNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSLNPSTDVLALSSIEVDLSSIAI 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT I + + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP++N G++ G++CPCHGS YD+SGR+RKGPA N+ VPPY F
Sbjct: 123 LGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIF 168
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG CA I S++ S DVLA+++IEVDL+ I
Sbjct: 6 DNRNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSLNPSTDVLALSSIEVDLSSIAI 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>gi|367475156|ref|ZP_09474629.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 285]
gi|365272523|emb|CCD87097.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 285]
Length = 175
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HRT+K+++ + +S
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHRTKKQVEEVRAVPVSS 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGR+R+G
Sbjct: 94 LPDPATDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRVRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 154 PAPLNLPVPPYQF 166
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HR
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHR 78
>gi|197106333|ref|YP_002131710.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Phenylobacterium zucineum HLK1]
gi|196479753|gb|ACG79281.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Phenylobacterium zucineum HLK1]
Length = 184
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/132 (56%), Positives = 93/132 (70%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I M+ S D LA+A+IE DL+ + EGQ V KWRGKPLFIR+RT ++I + + +
Sbjct: 44 MIDQMNPSGDTLALASIEFDLSKVAEGQQVVVKWRGKPLFIRNRTPQQIAAAIKDDGAPM 103
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
DPQ D R K P WLV++G CTHLGCVP GD+GG++CPCHGSHYD SGRIRKGP
Sbjct: 104 PDPQPDEARHKPGKPEWLVLVGTCTHLGCVPTFGGGDYGGWFCPCHGSHYDVSGRIRKGP 163
Query: 174 APTNMEVPPYQF 185
AP N+EVP + F
Sbjct: 164 APKNLEVPTWDF 175
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I M+ S D LA+A+IE DL+ + EGQ V KWRGKPLFIR+R
Sbjct: 44 MIDQMNPSGDTLALASIEFDLSKVAEGQQVVVKWRGKPLFIRNR 87
>gi|338973272|ref|ZP_08628639.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Bradyrhizobiaceae bacterium SG-6C]
gi|338233581|gb|EGP08704.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Bradyrhizobiaceae bacterium SG-6C]
Length = 175
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ A +A A IEVDL+ I GQ + WRGKP++I +RT+K+ID ++ N+S
Sbjct: 34 LISQMNPDASTIAAGAPIEVDLSPIATGQDIKVFWRGKPIYIMNRTKKQIDEARSVNVSS 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D RVK+ WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 94 LPDPQTDQSRVKEGHDQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPY F
Sbjct: 154 PAPLNLAVPPYAF 166
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ A +A A IEVDL+ I GQ + WRGKP++I +R
Sbjct: 34 LISQMNPDASTIAAGAPIEVDLSPIATGQDIKVFWRGKPIYIMNR 78
>gi|91975782|ref|YP_568441.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB5]
gi|91682238|gb|ABE38540.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB5]
Length = 175
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 99/133 (74%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL I EGQ + WRGKP++I +RT+K+++ ++ ++S
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGKPIYIMNRTKKQVEEARSVSLSA 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D DR K+ WLV++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+G
Sbjct: 94 LPDPQTDQDRTKEGYEQWLVVVGICTHLGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 154 PAPANLPVPPYQF 166
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL I EGQ + WRGKP++I +R
Sbjct: 34 FISQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGKPIYIMNR 78
>gi|365878692|ref|ZP_09418155.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 375]
gi|365887938|ref|ZP_09426746.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. STM
3809]
gi|365293402|emb|CCD90686.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 375]
gi|365336410|emb|CCD99277.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. STM
3809]
Length = 148
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HRT+K+++ + +S
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHRTKKQVEEVRAVPVSS 66
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP D R KD WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YDASGR+R+G
Sbjct: 67 LPDPATDQSRTKDGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDASGRVRQG 126
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 127 PAPLNLPVPPYQF 139
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL + EGQ + WRGKP++I HR
Sbjct: 7 FISQMNPDASTIAAGAPIEVDLTPVAEGQDIKVFWRGKPIYISHR 51
>gi|421603133|ref|ZP_16045589.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. CCGE-LA001]
gi|404264756|gb|EJZ29980.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. CCGE-LA001]
Length = 138
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 94/125 (75%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ + A A IEVDL+ I EGQ + WRGKP++I HRT+K+ID + N++ L DPQAD
Sbjct: 5 ASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQADD 64
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK WLV+IGICTHLGC+PIA+ G + G++CPCHGS YD SGRIR+GPAP+N+ V
Sbjct: 65 ARVKSGHEQWLVVIGICTHLGCIPIAHEGSYDGFFCPCHGSVYDTSGRIRQGPAPSNLAV 124
Query: 181 PPYQF 185
PPY F
Sbjct: 125 PPYTF 129
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ + A A IEVDL+ I EGQ + WRGKP++I HR
Sbjct: 5 ASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHR 41
>gi|383773740|ref|YP_005452806.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361864|dbj|BAL78694.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 138
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 95/125 (76%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ + A A IEVDL+ + EGQ + WRGKP++I HRT+K+ID + N++ L DPQ+D
Sbjct: 5 ASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDE 64
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+GPAP N+ V
Sbjct: 65 ARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPANLPV 124
Query: 181 PPYQF 185
PPY F
Sbjct: 125 PPYTF 129
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ + A A IEVDL+ + EGQ + WRGKP++I HR
Sbjct: 5 ASTIAAGAPIEVDLSPVAEGQDIKVFWRGKPIYISHR 41
>gi|144899701|emb|CAM76565.1| Twin-arginine translocation pathway signal:Ubiquinol-cytochrome c
reductase, iron-sulfur subunit [Magnetospirillum
gryphiswaldense MSR-1]
Length = 184
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 97/135 (71%), Gaps = 5/135 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ SM+ +AD LA++T +VDL I GQ++T W+GKP+F+RHRT ++I + + L
Sbjct: 41 FVHSMNPAADTLALSTTDVDLAAIQPGQAITVVWQGKPVFVRHRTAEDIAAAAKDDTADL 100
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIAN-----AGDWGGYYCPCHGSHYDASGRIR 170
RD AD RV+ P WL++IG+CTHLGCVP+ GD+GG++CPCHGSHYD SGRIR
Sbjct: 101 RDKAADGTRVQKPEWLIVIGVCTHLGCVPLGQKAADPKGDFGGWFCPCHGSHYDTSGRIR 160
Query: 171 KGPAPTNMEVPPYQF 185
KGPAP N+ VP Y F
Sbjct: 161 KGPAPLNLPVPKYAF 175
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ SM+ +AD LA++T +VDL I GQ++T W+GKP+F+RHR
Sbjct: 41 FVHSMNPAADTLALSTTDVDLAAIQPGQAITVVWQGKPVFVRHR 84
>gi|87198702|ref|YP_495959.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium aromaticivorans DSM 12444]
gi|87134383|gb|ABD25125.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium aromaticivorans DSM 12444]
Length = 192
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 119/179 (66%), Gaps = 10/179 (5%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
PD E +R+ F + A + VG V +V+ +S M+ SADVLA ++ E+D++ I
Sbjct: 14 GPDVTGEGVRRRDFINIAAVSFAGVGGV---AVLLPLVSQMAPSADVLAESSTEIDISAI 70
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGIC 137
GQ++ +R +P+FIR+ T++EI + + ++S LRDPQ+ +R K+ +WL+ +G+C
Sbjct: 71 QPGQAIKAVFRKQPVFIRNLTKEEIASAEKVDVSSLRDPQSLEERTKEGKTNWLITMGVC 130
Query: 138 THLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
THLGCVP+ G++GGY+CPCHGS YD + RIRKGPAP N+EVPPY+F + ++
Sbjct: 131 THLGCVPLGAGEGEVKGEFGGYFCPCHGSSYDTAARIRKGPAPKNLEVPPYEFASDTVV 189
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
PD E +R+ F + A + VG V +V+ +S M+ SADVLA ++ E+D++ I
Sbjct: 14 GPDVTGEGVRRRDFINIAAVSFAGVGGV---AVLLPLVSQMAPSADVLAESSTEIDISAI 70
Query: 273 PEGQSVTFKWRGKPLFIRH 291
GQ++ +R +P+FIR+
Sbjct: 71 QPGQAIKAVFRKQPVFIRN 89
>gi|254485461|ref|ZP_05098666.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. GAI101]
gi|214042330|gb|EEB82968.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. GAI101]
Length = 186
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 110/173 (63%), Gaps = 17/173 (9%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSAVEPGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--------------DPSWLVIIG 135
GKP+FIR RT+ EI+ + ++S L DP+A++ + WLV++G
Sbjct: 68 LGKPVFIRRRTEAEIEEARAVDVSALPDPEAENANIAAGAPATDENRAMAGQEEWLVMMG 127
Query: 136 ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
+CTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP +F DE
Sbjct: 128 VCTHLGCVPLGDAGDFGGWFCPCHGSHYDTAGRIRKGPAPRNLPVPLAEFVDE 180
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSAVEPGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
GKP+FIR R
Sbjct: 68 LGKPVFIRRR 77
>gi|239832427|ref|ZP_04680756.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
intermedium LMG 3301]
gi|239824694|gb|EEQ96262.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
intermedium LMG 3301]
Length = 193
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VVG+ + FI M A LA A+IEVD++ + EG S+T
Sbjct: 14 EPTRRDFLYIATGMAGVVGVA---GLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 70
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-DSDRVKDP--------------SWL 131
KWRGKP+FIR+R+ KE++ + T + L+DP A +++ D +WL
Sbjct: 71 VKWRGKPVFIRNRSAKEVEDAKTTALGDLKDPIARNANLASDAQATDLARSAGEGKENWL 130
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 131 VMIGVCTHLGCVPLGESGSFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTSDTVI 190
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VVG+ + FI M A LA A+IEVD++ + EG S+T
Sbjct: 14 EPTRRDFLYIATGMAGVVGVA---GLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 70
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 71 VKWRGKPVFIRNR 83
>gi|357385232|ref|YP_004899956.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Pelagibacterium halotolerans B2]
gi|351593869|gb|AEQ52206.1| ubiquinol-cytochrome C reductase iron-sulfur subunit
[Pelagibacterium halotolerans B2]
Length = 174
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 99/138 (71%), Gaps = 2/138 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ ++ A VLA+A+I D+ + EG SVT WRG P+F+RHRT EI+ + +S+L
Sbjct: 34 LINQLNPDASVLALASIRFDVAPVAEGSSVTIMWRGLPVFVRHRTPAEIEEARAVPLSEL 93
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DPQ D +RV + WL+++ CTHLGCVP+ +GD+ G++CPCHGSHYD +GRIR+GP
Sbjct: 94 KDPQTDEERVLEGHEEWLIMVANCTHLGCVPVGESGDYDGWFCPCHGSHYDTAGRIRRGP 153
Query: 174 APTNMEVPPYQFGDEGIL 191
AP N+ VPPY+F + ++
Sbjct: 154 APRNLVVPPYEFVSDTVV 171
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ ++ A VLA+A+I D+ + EG SVT WRG P+F+RHR
Sbjct: 34 LINQLNPDASVLALASIRFDVAPVAEGSSVTIMWRGLPVFVRHR 77
>gi|339501573|ref|YP_004688947.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
gi|338760059|gb|AEI96521.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
Length = 191
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 113/181 (62%), Gaps = 18/181 (9%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
E+T+R+ F Y G+ G+V + + I+ M+ SADV A+A I VD++ + EG +
Sbjct: 11 EDTERRDFLYYATAGA---GVVASGVALWPLINQMNPSADVRALARISVDMSGLAEGTQL 67
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRV--KDPSWL 131
T WRGKP+FIRHRTQ EI + +S L D A D +R ++L
Sbjct: 68 TVNWRGKPVFIRHRTQAEIAQAREEAVSALPDTDARNPNLPGEAAARDENRAIPGHDAYL 127
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGI 190
V+IG+CTHLGCVP+ + AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +PP D +
Sbjct: 128 VMIGVCTHLGCVPLGDGAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLHIPPLALSDNMV 187
Query: 191 L 191
L
Sbjct: 188 L 188
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
E+T+R+ F Y G+ G+V + + I+ M+ SADV A+A I VD++ + EG +
Sbjct: 11 EDTERRDFLYYATAGA---GVVASGVALWPLINQMNPSADVRALARISVDMSGLAEGTQL 67
Query: 279 TFKWRGKPLFIRHR 292
T WRGKP+FIRHR
Sbjct: 68 TVNWRGKPVFIRHR 81
>gi|402496623|ref|YP_006555883.1| Rieske Fe-S protein [Wolbachia endosymbiont of Onchocerca ochengi]
gi|398649896|emb|CCF78066.1| Rieske Fe-S protein [Wolbachia endosymbiont of Onchocerca ochengi]
Length = 199
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 117/189 (61%), Gaps = 7/189 (3%)
Query: 8 RTPDFSKYRRDRNPDK-GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 66
+ P SK + P K ++ R+ F + + +G A S I SM+ S++V
Sbjct: 9 KKPPVSKENKKIFPVKDSTKDKSRRDFIILTTCAMAGIG---AASSFWPLIKSMNPSSEV 65
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV- 125
LAM+T+EV+L+ I EGQ KW+GKP+ IR RT++EID + N+ LRDP+ D RV
Sbjct: 66 LAMSTVEVNLSNIQEGQEKKVKWQGKPVLIRRRTKQEIDAARAANVESLRDPEPDEQRVY 125
Query: 126 -KDPSWLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
WL++IGICTHLGCVP+ + D G++CPCHGS+YD SGR+ +GPAP NM +P Y
Sbjct: 126 KGKNEWLIMIGICTHLGCVPVNHVTKDGNGWFCPCHGSYYDTSGRVIRGPAPKNMAIPNY 185
Query: 184 QFGDEGILI 192
F E +++
Sbjct: 186 FFLSENVVV 194
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 201 RTPDFSKYRRDRNPDK-GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 259
+ P SK + P K ++ R+ F + + +G A S I SM+ S++V
Sbjct: 9 KKPPVSKENKKIFPVKDSTKDKSRRDFIILTTCAMAGIG---AASSFWPLIKSMNPSSEV 65
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
LAM+T+EV+L+ I EGQ KW+GKP+ IR R
Sbjct: 66 LAMSTVEVNLSNIQEGQEKKVKWQGKPVLIRRR 98
>gi|190571347|ref|YP_001975705.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018743|ref|ZP_03334551.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|373450526|ref|ZP_09542511.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Wolbachia
pipientis wAlbB]
gi|190357619|emb|CAQ55060.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995694|gb|EEB56334.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|371932289|emb|CCE77520.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Wolbachia
pipientis wAlbB]
Length = 199
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 102/141 (72%), Gaps = 5/141 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ SM+ SA+VLAM+T+EV+L+ I EGQ KW+GKP+FIR RT++EI+ + N L
Sbjct: 55 LVKSMNPSAEVLAMSTVEVNLSDIQEGQGKKVKWQGKPVFIRKRTKQEIEAARAINAENL 114
Query: 116 RDPQADSDRV---KDPSWLVIIGICTHLGCVPIANA-GDWGGYYCPCHGSHYDASGRIRK 171
RDP++D RV KD WL++IGICTHLGCVP+ +A D G++CPCHGS+YD SGR+
Sbjct: 115 RDPESDEKRVYKGKD-EWLIMIGICTHLGCVPVDHATKDGNGWFCPCHGSYYDTSGRVIG 173
Query: 172 GPAPTNMEVPPYQFGDEGILI 192
GPAP NM +P Y F E I++
Sbjct: 174 GPAPKNMAIPDYFFPSENIVV 194
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ SM+ SA+VLAM+T+EV+L+ I EGQ KW+GKP+FIR R
Sbjct: 55 LVKSMNPSAEVLAMSTVEVNLSDIQEGQGKKVKWQGKPVFIRKR 98
>gi|99035106|ref|ZP_01314892.1| hypothetical protein Wendoof_01000266 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 199
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Query: 16 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 75
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 76 LNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV---KDPSWLV 132
L+ I EG V KW+GKP+FIR RT++EI+ + N+ LRDPQ D RV KD WL+
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKD-EWLI 133
Query: 133 IIGICTHLGCVPIANAG-DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++GICTHLGCVP+ +A D G++CPCHGS+YD SGR+ GPAP NM VP Y F E ++
Sbjct: 134 MLGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNMAVPDYFFPSENVV 193
Query: 192 I 192
+
Sbjct: 194 V 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 209 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 268
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 269 LNLIPEGQSVTFKWRGKPLFIRHR 292
L+ I EG V KW+GKP+FIR R
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRR 98
>gi|430004273|emb|CCF20066.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Rhizobium sp.]
Length = 192
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 114/180 (63%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVSGVEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRGKP+FIR+RT++EI+ + +L+DP A +D + +W+
Sbjct: 70 VKWRGKPVFIRNRTEQEIEAANAVALEELKDPIARNDNIDATAEATDLARSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAPTN+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPTNLPVPTFTFTSDTVI 189
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVSGVEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPVFIRNR 82
>gi|42520998|ref|NP_966913.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|42410739|gb|AAS14847.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 199
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Query: 16 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 75
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 76 LNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV---KDPSWLV 132
L+ I EG V KW+GKP+FIR RT++EI+ + N+ LRDPQ D RV KD WL+
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKD-EWLI 133
Query: 133 IIGICTHLGCVPIANAG-DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++GICTHLGCVP+ +A D G++CPCHGS+YD SGR+ GPAP NM VP Y F E ++
Sbjct: 134 MLGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNMAVPDYFFPSENVV 193
Query: 192 I 192
+
Sbjct: 194 V 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 209 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 268
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 269 LNLIPEGQSVTFKWRGKPLFIRHR 292
L+ I EG V KW+GKP+FIR R
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRR 98
>gi|353328274|ref|ZP_08970601.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 199
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 102/141 (72%), Gaps = 5/141 (3%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ SM+ SA+VLAM+T+EV+L+ I EGQ KW+GKP+FIR RT++EI+ + N L
Sbjct: 55 LVKSMNPSAEVLAMSTVEVNLSDIQEGQGKKVKWQGKPVFIRKRTKQEIEAARAINAENL 114
Query: 116 RDPQADSDRV---KDPSWLVIIGICTHLGCVPIANA-GDWGGYYCPCHGSHYDASGRIRK 171
RDP++D RV KD WL++IGICTHLGCVP+ +A D G++CPCHGS+YD SGR+
Sbjct: 115 RDPESDEKRVYKGKD-EWLIMIGICTHLGCVPVDHATKDGNGWFCPCHGSYYDTSGRVIG 173
Query: 172 GPAPTNMEVPPYQFGDEGILI 192
GPAP NM +P Y F E I++
Sbjct: 174 GPAPKNMAIPDYFFPSENIVV 194
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ SM+ SA+VLAM+T+EV+L+ I EGQ KW+GKP+FIR R
Sbjct: 55 LVKSMNPSAEVLAMSTVEVNLSDIQEGQGKKVKWQGKPVFIRKR 98
>gi|83953194|ref|ZP_00961916.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83842162|gb|EAP81330.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 186
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 17/173 (9%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSAVEPGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDR--VKDPSWLVIIG 135
GKP+FIR RT++EI ++ +S+L DP A D +R V WLV++G
Sbjct: 68 LGKPVFIRRRTEEEIAKARDVEMSELPDPGAENANIAAGAPATDENRAMVGKEDWLVMMG 127
Query: 136 ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
+CTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP +F DE
Sbjct: 128 VCTHLGCVPLGDAGDFGGWFCPCHGSHYDTAGRIRKGPAPRNLPVPIAEFVDE 180
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSAVEPGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
GKP+FIR R
Sbjct: 68 LGKPVFIRRR 77
>gi|338737758|ref|YP_004674720.1| Ubiquinol-cytochrome c reductase complex, iron-sulfur subunit
(Rieske iron-sulfur protein) [Hyphomicrobium sp. MC1]
gi|337758321|emb|CCB64146.1| Ubiquinol-cytochrome c reductase complex, iron-sulfur subunit
(Rieske iron-sulfur protein) [Hyphomicrobium sp. MC1]
Length = 207
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 111/178 (62%), Gaps = 22/178 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F + + VG A S++ FI M+ A +A++++EVDL + EGQ++T
Sbjct: 24 EPHRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTMALSSVEVDLAPVKEGQAIT 80
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK--DPSWLV 132
WRGKP+FIR+RT+ EI++ + L DP A D++R K +W++
Sbjct: 81 AMWRGKPIFIRNRTKAEIESALAVPVKDLPDPLARNEDLPTDDPATDANRTKAGHENWII 140
Query: 133 IIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
IIGICTHLGC+P A G++GG++CPCHGS YD SGRIRKGPAP NMEVPPY F
Sbjct: 141 IIGICTHLGCIPKGQALGDDRGEYGGWFCPCHGSQYDTSGRIRKGPAPRNMEVPPYAF 198
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F + + VG A S++ FI M+ A +A++++EVDL + EGQ++T
Sbjct: 24 EPHRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTMALSSVEVDLAPVKEGQAIT 80
Query: 280 FKWRGKPLFIRHR 292
WRGKP+FIR+R
Sbjct: 81 AMWRGKPIFIRNR 93
>gi|225677217|ref|ZP_03788210.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225590741|gb|EEH11975.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Muscidifurax uniraptor]
Length = 199
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Query: 16 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 75
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 76 LNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV---KDPSWLV 132
L+ I EG V KW+GKP+FIR RT++EI+ + N+ LRDPQ D RV KD WL+
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKD-EWLI 133
Query: 133 IIGICTHLGCVPIANAG-DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++GICTHLGCVP+ +A D G++CPCHGS+YD SGR+ GPAP NM VP Y F E ++
Sbjct: 134 MLGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNMAVPDYFFLSENVV 193
Query: 192 I 192
+
Sbjct: 194 V 194
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 209 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 268
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAASGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 269 LNLIPEGQSVTFKWRGKPLFIRHR 292
L+ I EG V KW+GKP+FIR R
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRR 98
>gi|319997146|gb|ADV91167.1| mitochondrial ubiquinol cytochrome c reductase reiske Fe-S
[Karlodinium micrum]
Length = 352
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ + Y +A GS V + + + + +M + DV A +EVDL + GQ+ KW
Sbjct: 186 RRPWIYFLAAGSGFVASSLVRVIACKLVHTMWPAKDVFAAGVVEVDLRQMRMGQNFVCKW 245
Query: 90 RGKPLFIRHRTQKEIDTEQNTN--ISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIAN 147
RGKP+FIR RT + I+ + + ++ R+P D++R P WL+ GICTHLGC+P+ +
Sbjct: 246 RGKPVFIRRRTPEMIEDARKDDSIVASFREPATDAERCIKPEWLICEGICTHLGCIPVPD 305
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
G++GGY+CPCHGSHYD +GRIR GPAP N+ + P +F DE +
Sbjct: 306 QGNYGGYFCPCHGSHYDYAGRIRLGPAPKNLPLIPTEFLDENTV 349
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ + Y +A GS V + + + + +M + DV A +EVDL + GQ+ KW
Sbjct: 186 RRPWIYFLAAGSGFVASSLVRVIACKLVHTMWPAKDVFAAGVVEVDLRQMRMGQNFVCKW 245
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 246 RGKPVFIRRR 255
>gi|103486831|ref|YP_616392.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingopyxis
alaskensis RB2256]
gi|98976908|gb|ABF53059.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingopyxis
alaskensis RB2256]
Length = 185
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 114/174 (65%), Gaps = 10/174 (5%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
++ +R+ F + A + VG V A V ++ M+ SADVLA+++ E+D++ I GQ+
Sbjct: 12 EDGVRRRDFINIAAVSFAGVGAVAA---VLPLVNQMNPSADVLALSSTEIDISAIGTGQA 68
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGC 142
+ WR +P+F+R+ T EI + +S LRD Q ++R K +WL+ +G+CTHLGC
Sbjct: 69 IKTSWRKQPVFVRNLTAAEIAEANSVPLSDLRDAQTLAERTKPGRENWLITLGVCTHLGC 128
Query: 143 VPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
VP+ N GD+GGY+CPCHGSHYD + RIRKGPAPTN+ VPPY+F + ++
Sbjct: 129 VPLGAAEGENRGDYGGYFCPCHGSHYDTAARIRKGPAPTNLVVPPYEFTSDTVV 182
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
++ +R+ F + A + VG V A V ++ M+ SADVLA+++ E+D++ I GQ+
Sbjct: 12 EDGVRRRDFINIAAVSFAGVGAVAA---VLPLVNQMNPSADVLALSSTEIDISAIGTGQA 68
Query: 278 VTFKWRGKPLFIRH 291
+ WR +P+F+R+
Sbjct: 69 IKTSWRKQPVFVRN 82
>gi|86748325|ref|YP_484821.1| cytochrome b6-F complex iron-sulfur subunit [Rhodopseudomonas
palustris HaA2]
gi|86571353|gb|ABD05910.1| Cytochrome b6-F complex iron-sulfur subunit [Rhodopseudomonas
palustris HaA2]
Length = 175
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 96/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FI+ M+ A +A A IEVDL I EGQ + WRG+P+F+ +RTQK++D + +S
Sbjct: 34 FIAQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIFVMNRTQKQVDEARAVKLSA 93
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D +R K WLV++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+G
Sbjct: 94 LPDPQTDEERTKAGHEKWLVVVGICTHLGCIPIAHEGLFDGFFCPCHGSQYDSSGRIRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 154 PAPLNLPVPPYQF 166
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI+ M+ A +A A IEVDL I EGQ + WRG+P+F+ +R
Sbjct: 34 FIAQMNPDASTIAAGAPIEVDLTPIAEGQDIKVFWRGQPIFVMNR 78
>gi|225630868|ref|YP_002727659.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
sp. wRi]
gi|225592849|gb|ACN95868.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
sp. wRi]
Length = 199
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 117/181 (64%), Gaps = 5/181 (2%)
Query: 16 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 75
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 76 LNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV---KDPSWLV 132
L+ I EG V KW+GKP+FIR RT++EI+ + N+ LRDPQ D RV KD WL+
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSLRDPQLDEQRVYEGKD-EWLI 133
Query: 133 IIGICTHLGCVPIANAG-DWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+IGICTHLGCVP+ +A D G++CPCHGS+YD SGR+ GPAP NM VP Y F E ++
Sbjct: 134 MIGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGGPAPKNMVVPDYFFPSENVV 193
Query: 192 I 192
+
Sbjct: 194 V 194
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 209 RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVD 268
+ D+ ++ T+ K+ I + + + A S + + SM+ SA+VLA +T+EV+
Sbjct: 15 KEDKKTPPVKDLTKNKSRRDFITLTTCAMAGIGAVSGLWPLVKSMNPSAEVLATSTVEVN 74
Query: 269 LNLIPEGQSVTFKWRGKPLFIRHR 292
L+ I EG V KW+GKP+FIR R
Sbjct: 75 LSGIQEGHGVKVKWQGKPVFIRRR 98
>gi|92118707|ref|YP_578436.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
hamburgensis X14]
gi|91801601|gb|ABE63976.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
hamburgensis X14]
Length = 175
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/125 (58%), Positives = 93/125 (74%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ + A A IEVDL I EGQ + WRGKP+FI HRT+K+I+ +N N++ L DP +D
Sbjct: 42 ASTIAAGAPIEVDLAPIAEGQDIKVFWRGKPIFISHRTKKQIEDARNVNVASLPDPASDQ 101
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK+ WLV+IGICTHLGCVPIA+ G + G++CPCHGS YD SGRIR+GPAP N+ V
Sbjct: 102 SRVKEGHDQWLVVIGICTHLGCVPIAHEGAYDGFFCPCHGSVYDTSGRIRQGPAPLNLPV 161
Query: 181 PPYQF 185
PPY F
Sbjct: 162 PPYAF 166
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ + A A IEVDL I EGQ + WRGKP+FI HR
Sbjct: 42 ASTIAAGAPIEVDLAPIAEGQDIKVFWRGKPIFISHR 78
>gi|295687974|ref|YP_003591667.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Caulobacter
segnis ATCC 21756]
gi|295429877|gb|ADG09049.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
segnis ATCC 21756]
Length = 183
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
Query: 51 SVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNT 110
++V FI M+ SAD A+A+ E DL + EGQ VT KWRGKPLF+R+RT+ EI
Sbjct: 38 TLVWPFIDQMNPSADTRALASTEFDLTKVAEGQQVTIKWRGKPLFVRNRTKAEIAKAVAD 97
Query: 111 NISQLRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGR 168
+ + ++DP D+ RVK WL++ G CTHLGCVP G++GG++CPCHGS YD SGR
Sbjct: 98 DSAAMKDPATDASRVKPGKAQWLIVGGNCTHLGCVPTFGGGEYGGWFCPCHGSVYDTSGR 157
Query: 169 IRKGPAPTNMEVPPYQF 185
IRKGPAPTN+ VP Y F
Sbjct: 158 IRKGPAPTNLVVPEYAF 174
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 244 SVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++V FI M+ SAD A+A+ E DL + EGQ VT KWRGKPLF+R+R
Sbjct: 38 TLVWPFIDQMNPSADTRALASTEFDLTKVAEGQQVTIKWRGKPLFVRNR 86
>gi|57239231|ref|YP_180367.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58579192|ref|YP_197404.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58617245|ref|YP_196444.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Ehrlichia
ruminantium str. Gardel]
gi|57161310|emb|CAH58233.1| ubiquinol-cytochrome c reductase iron-sulphur subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58416857|emb|CAI27970.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Ehrlichia
ruminantium str. Gardel]
gi|58417818|emb|CAI27022.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 187
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 114/178 (64%), Gaps = 6/178 (3%)
Query: 18 DRNPDKG-QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 76
D N G Q++ +R+ F + + +G++ S V I +S SA+V+A +T+EV+L
Sbjct: 4 DENKKSGFQKKVKRRDFLGLTTLSMAGIGLL---SSVYPLIKFLSPSAEVIAKSTVEVNL 60
Query: 77 NLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVII 134
+ I EG++ KW+GKP+FIR RT +EI+ + NIS LRDPQ+D +R WL+++
Sbjct: 61 SDIKEGKTKVVKWQGKPVFIRKRTMQEIEEARAANISDLRDPQSDQERTHSGREQWLIMV 120
Query: 135 GICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
GICTHLGCVP+ G+YCPCHGS YD SGRI GPAP N+ VP Y F + +++
Sbjct: 121 GICTHLGCVPVEVEDGKKGWYCPCHGSKYDTSGRIVSGPAPLNLPVPDYYFSGKDVIV 178
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 211 DRNPDKG-QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 269
D N G Q++ +R+ F + + +G++ S V I +S SA+V+A +T+EV+L
Sbjct: 4 DENKKSGFQKKVKRRDFLGLTTLSMAGIGLL---SSVYPLIKFLSPSAEVIAKSTVEVNL 60
Query: 270 NLIPEGQSVTFKWRGKPLFIRHR 292
+ I EG++ KW+GKP+FIR R
Sbjct: 61 SDIKEGKTKVVKWQGKPVFIRKR 83
>gi|390461230|ref|XP_003732634.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Callithrix jacchus]
Length = 286
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 116/192 (60%), Gaps = 6/192 (3%)
Query: 5 SDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
+DI+ P FS + RK F+Y++ ++V A SV QF+ S
Sbjct: 95 TDIKVPAFSGXHLTEVSVSTESSKESSKARKCFSYLVTAIATVAH--AADSVFPQFVPST 152
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
ASADVLAM+ + L+ IPEG+++ F+ RGK LF+ +RT+KE D + LRDPQ
Sbjct: 153 RASADVLAMSKXKFRLSDIPEGKNMAFRXRGKLLFVGYRTKKETDXKAAVEGPHLRDPQH 212
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
D ++VK P ++++G+C HLG V IA AG GGYYCPCH S YDA GRIRK P P+N+E
Sbjct: 213 DLEQVKKPQXVILVGVCIHLGYVLIAIAGGSGGYYCPCHRSCYDAFGRIRKRPVPSNLEX 272
Query: 181 PPYQFGDEGILI 192
P Y+F I++
Sbjct: 273 PSYEFTSVDIVV 284
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
Query: 198 SDIRTPDFSKYRRDR----NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
+DI+ P FS + RK F+Y++ ++V A SV QF+ S
Sbjct: 95 TDIKVPAFSGXHLTEVSVSTESSKESSKARKCFSYLVTAIATVAH--AADSVFPQFVPST 152
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
ASADVLAM+ + L+ IPEG+++ F+ RGK LF+ +R
Sbjct: 153 RASADVLAMSKXKFRLSDIPEGKNMAFRXRGKLLFVGYR 191
>gi|85714272|ref|ZP_01045260.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
sp. Nb-311A]
gi|85698719|gb|EAQ36588.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
sp. Nb-311A]
Length = 159
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 96/125 (76%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ V A A IEVDL I +GQ + WRGKP++I HRT+K+I+ ++ N++ L DPQ DS
Sbjct: 26 ASTVAAGAPIEVDLAPIADGQDIKVFWRGKPIYIMHRTKKQIEEARDVNVASLPDPQPDS 85
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK+ WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+GPAP N+ +
Sbjct: 86 ARVKEGHDQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQGPAPLNLAI 145
Query: 181 PPYQF 185
PPY F
Sbjct: 146 PPYAF 150
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ V A A IEVDL I +GQ + WRGKP++I HR
Sbjct: 26 ASTVAAGAPIEVDLAPIADGQDIKVFWRGKPIYIMHR 62
>gi|94495461|ref|ZP_01302041.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
sp. SKA58]
gi|94424849|gb|EAT09870.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
sp. SKA58]
Length = 171
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 102/152 (67%), Gaps = 8/152 (5%)
Query: 49 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQ 108
A +VV I M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH T KEI
Sbjct: 19 AVAVVVPLIDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRHLTPKEIAEAD 78
Query: 109 NTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGS 161
+++ LRDPQ +R D WL+ +G+CTHLGCVP+ N G++GGY+CPCHGS
Sbjct: 79 KVDVATLRDPQTLEERTVDGKKQWLITMGVCTHLGCVPLGAGEGENRGEYGGYFCPCHGS 138
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD + RIRKGPAP N+EVP ++F D IL+
Sbjct: 139 SYDTAARIRKGPAPKNLEVPEFKFTSDTAILV 170
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
A +VV I M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH
Sbjct: 19 AVAVVVPLIDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRH 68
>gi|408787864|ref|ZP_11199590.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
lupini HPC(L)]
gi|424910958|ref|ZP_18334335.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|392846989|gb|EJA99511.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae USDA 2370]
gi|408486328|gb|EKJ94656.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
lupini HPC(L)]
Length = 192
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 117/187 (62%), Gaps = 19/187 (10%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
N D E T+R F Y++ G + G V A +V FI M A LA+A+IEVD+ +
Sbjct: 7 NHDASGEPTRRD-FLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVAAV 62
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK- 126
G S+T KWRGKP+FIR+RT+KEI+ + + +L+DP A D DR
Sbjct: 63 EPGMSLTVKWRGKPIFIRNRTEKEIEEAKAVALGELKDPVARNANIAADAQATDIDRSAG 122
Query: 127 --DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
+W+V++G CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P +
Sbjct: 123 EGKENWIVMVGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLAIPTFA 182
Query: 185 FGDEGIL 191
F + ++
Sbjct: 183 FTSDTVI 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
N D E T+R F Y++ G + G V A +V FI M A LA+A+IEVD+ +
Sbjct: 7 NHDASGEPTRRD-FLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVAAV 62
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
G S+T KWRGKP+FIR+R
Sbjct: 63 EPGMSLTVKWRGKPIFIRNR 82
>gi|390165810|ref|ZP_10218087.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
indicum B90A]
gi|389591344|gb|EIM69315.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
indicum B90A]
Length = 193
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 101/154 (65%), Gaps = 8/154 (5%)
Query: 47 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT 106
V A +VV + M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH T KEI
Sbjct: 39 VGAVAVVIPLVDQMNPSADVLALASTEVDLSSIQPGQAIKTTFRSQPLFVRHLTDKEIAE 98
Query: 107 EQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCH 159
+ S LRDPQ +R D WLV +G+CTHLGCVP+ N G++GGY+CPCH
Sbjct: 99 ADKVDASSLRDPQTLEERTVDGKKQWLVTMGVCTHLGCVPLGAGEGENKGEYGGYFCPCH 158
Query: 160 GSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
GS YD + RIRKGPAP N+EVP + F D IL+
Sbjct: 159 GSSYDTAARIRKGPAPKNLEVPKFSFTSDTAILV 192
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 240 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
V A +VV + M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH
Sbjct: 39 VGAVAVVIPLVDQMNPSADVLALASTEVDLSSIQPGQAIKTTFRSQPLFVRH 90
>gi|399036810|ref|ZP_10733774.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. CF122]
gi|398065637|gb|EJL57258.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. CF122]
Length = 196
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 107/174 (61%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VG V SV FI M A LA+A+IEVD++ + G S+T
Sbjct: 17 EPTRRDFLYLTTGMAGAVGAV---SVAWPFIDQMRPDASTLALASIEVDVSSLEPGMSLT 73
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA--------------DSDRVKD-PSWL 131
KWRGKP+FIR+RT +E+ +S L+DP A D KD +W+
Sbjct: 74 AKWRGKPIFIRNRTPEEVKAADEVPLSDLKDPIARNANLPSDAQATGVDRSAGKDKENWI 133
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V+IG CTHLGC+P+ AG++ G++CPCHGS YD +GRIRKGPAPTN+ +P Y F
Sbjct: 134 VMIGSCTHLGCIPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPTNLAIPTYSF 187
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VG V SV FI M A LA+A+IEVD++ + G S+T
Sbjct: 17 EPTRRDFLYLTTGMAGAVGAV---SVAWPFIDQMRPDASTLALASIEVDVSSLEPGMSLT 73
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 74 AKWRGKPIFIRNR 86
>gi|159185116|ref|NP_355196.2| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
fabrum str. C58]
gi|159140387|gb|AAK87981.2| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
fabrum str. C58]
Length = 192
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 111/180 (61%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y++ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVTAVEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT KEID + L+DP A D DR +W+
Sbjct: 70 VKWRGKPIFIRNRTAKEIDEANAVALGDLKDPVARNANIAPDAQATDIDRSAGQGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLAIPTFAFTSDTVI 189
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y++ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVTAVEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPIFIRNR 82
>gi|329889696|ref|ZP_08268039.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta ATCC 11568]
gi|328844997|gb|EGF94561.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta ATCC 11568]
Length = 153
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+SM+ +AD LA++++EVD + GQ + KWRGKP+FIRHRT KEI + + L
Sbjct: 13 LINSMNPAADTLALSSVEVDYGKVQLGQQIVVKWRGKPVFIRHRTPKEIAEAVADDHAAL 72
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
RDP D+ R K WL++IG+CTHLGC+P GD+GG++CPCHGSHYD +GRIRKGP
Sbjct: 73 RDPATDASRHKPGKAEWLILIGVCTHLGCIPTFGTGDYGGWFCPCHGSHYDTAGRIRKGP 132
Query: 174 APTNMEVPPYQFGDE 188
AP N+ + Y F +E
Sbjct: 133 APKNLYLLDYAFLNE 147
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+SM+ +AD LA++++EVD + GQ + KWRGKP+FIRHR
Sbjct: 13 LINSMNPAADTLALSSVEVDYGKVQLGQQIVVKWRGKPVFIRHR 56
>gi|384918412|ref|ZP_10018491.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citreicella
sp. 357]
gi|384467721|gb|EIE52187.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citreicella
sp. 357]
Length = 191
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 117/185 (63%), Gaps = 22/185 (11%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y G+ G+V + V ++ M+ SADV A++TI VD++ + G +T
Sbjct: 8 EGTRRDFLYYATAGA---GVVATGAAVWPLVNQMNPSADVRALSTIRVDISGVETGTQLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVKDPS--WLV 132
KW GKP+FIR RT+ EI+ ++ +S+L D QA D++R D + WLV
Sbjct: 65 VKWLGKPVFIRRRTEAEIEDARSVEMSELVDAQARNANIDDGADATDANRALDDTGEWLV 124
Query: 133 IIGICTHLGCVPIANAGDW-----GGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
++G+CTHLGCVP+ NAG++ GG++CPCHGSHYD +GRIRKGPAP N+ VP +F +
Sbjct: 125 MMGVCTHLGCVPLGNAGEYTAGGTGGWFCPCHGSHYDTAGRIRKGPAPQNLPVPVAEFVE 184
Query: 188 EGILI 192
E ++
Sbjct: 185 ETTIL 189
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y G+ G+V + V ++ M+ SADV A++TI VD++ + G +T
Sbjct: 8 EGTRRDFLYYATAGA---GVVATGAAVWPLVNQMNPSADVRALSTIRVDISGVETGTQLT 64
Query: 280 FKWRGKPLFIRHR 292
KW GKP+FIR R
Sbjct: 65 VKWLGKPVFIRRR 77
>gi|88607923|ref|YP_505006.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Anaplasma
phagocytophilum HZ]
gi|88598986|gb|ABD44456.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Anaplasma
phagocytophilum HZ]
Length = 189
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 105/168 (62%), Gaps = 5/168 (2%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E QR+ F + S +G+ S + S+S SA+V+A +T+EVDL I EG +
Sbjct: 17 EVQRRDFLGLTTLFMSFIGIF---SFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKV 73
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR--VKDPSWLVIIGICTHLGCVP 144
KW+GKP+F+R RT++EI+ + +IS LRDPQ D R V WLV++GICTHLGCVP
Sbjct: 74 VKWQGKPVFVRRRTKEEIEKARAVDISGLRDPQTDQQRTFVGKEEWLVMVGICTHLGCVP 133
Query: 145 IANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
G+YCPCHGS YD SGRI GPAP N+ +P Y F D+ ++
Sbjct: 134 TEVKSGDKGWYCPCHGSKYDTSGRILAGPAPLNLPIPDYHFVDDSTMV 181
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E QR+ F + S +G+ S + S+S SA+V+A +T+EVDL I EG +
Sbjct: 17 EVQRRDFLGLTTLFMSFIGIF---SFLYPLFRSLSPSAEVMAQSTVEVDLTSIKEGSTKV 73
Query: 280 FKWRGKPLFIRHR 292
KW+GKP+F+R R
Sbjct: 74 VKWQGKPVFVRRR 86
>gi|440227387|ref|YP_007334478.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Rhizobium
tropici CIAT 899]
gi|440038898|gb|AGB71932.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Rhizobium
tropici CIAT 899]
Length = 192
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 99/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+RTQKEID + T +S+L
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTVKWRGKPVFIRNRTQKEIDDAKGTQLSEL 98
Query: 116 RDPQADSDRVKD---------------PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A + + +WLV+IG+CTHLGC+P+ AG++GG++CPCHG
Sbjct: 99 KDPVARNANLPSDAQATDVARSAGEGKENWLVMIGVCTHLGCIPLGQAGEYGGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
S YD +GRIR GPAP N+ +P Y F E
Sbjct: 159 SVYDTAGRIRHGPAPQNLFIPQYAFTSE 186
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTVKWRGKPVFIRNR 82
>gi|325303378|tpg|DAA34089.1| TPA_exp: ubiquinol cytochrome C reductase subunit RIP1 [Amblyomma
variegatum]
Length = 217
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
Query: 2 LAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+AH+DI+ PDFS YRR +P K + Q K TY+I G ++ G AKS+V +F+
Sbjct: 75 MAHTDIKVPDFSAYRRKSSLDPAKSSRDVQVSSKMQTYLILGVGAMGGTYVAKSLVTKFV 134
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
S++SASADVLAMA IE L+ IPEG++ TFKWRGKPLF+RHRT EI E + + S LR+
Sbjct: 135 SALSASADVLAMAKIESKLSDIPEGKNATFKWRGKPLFVRHRTSDEISRETSVDPSTLRE 194
Query: 118 PQADSDRVKDPSWLVIIGICTHL 140
PQ D +R + P WLVIIG+CTHL
Sbjct: 195 PQHDGERTQKPEWLVIIGVCTHL 217
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 5/105 (4%)
Query: 192 IRMLAHSDIRTPDFSKYRRDR--NPDKGQEETQ--RKAFTYMIAGGSSVVGMVCAKSVVN 247
+RM AH+DI+ PDFS YRR +P K + Q K TY+I G ++ G AKS+V
Sbjct: 73 VRM-AHTDIKVPDFSAYRRKSSLDPAKSSRDVQVSSKMQTYLILGVGAMGGTYVAKSLVT 131
Query: 248 QFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+F+S++SASADVLAMA IE L+ IPEG++ TFKWRGKPLF+RHR
Sbjct: 132 KFVSALSASADVLAMAKIESKLSDIPEGKNATFKWRGKPLFVRHR 176
>gi|393772936|ref|ZP_10361336.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium sp. Rr 2-17]
gi|392721675|gb|EIZ79140.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium sp. Rr 2-17]
Length = 177
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 100/141 (70%), Gaps = 7/141 (4%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
+V +S MSASADVLA ++ E+D++ I GQ++ ++R +P+F+R+ TQ EID +
Sbjct: 28 IVVPLVSQMSASADVLAASSTELDISAIQPGQAIKSQFRKQPVFVRNLTQHEIDEANKVD 87
Query: 112 ISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYD 164
S LRDPQ +R K+ +WL+ +G+CTHLGCVP+ G++GGY+CPCHGS YD
Sbjct: 88 ASTLRDPQTLEERTKEGKQNWLITMGVCTHLGCVPLGAGEGEAKGEFGGYFCPCHGSSYD 147
Query: 165 ASGRIRKGPAPTNMEVPPYQF 185
+ RIRKGPAP N+EVPPY+F
Sbjct: 148 TAARIRKGPAPKNLEVPPYEF 168
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 35/47 (74%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
+V +S MSASADVLA ++ E+D++ I GQ++ ++R +P+F+R+
Sbjct: 28 IVVPLVSQMSASADVLAASSTELDISAIQPGQAIKSQFRKQPVFVRN 74
>gi|163745238|ref|ZP_02152598.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oceanibulbus
indolifex HEL-45]
gi|161382056|gb|EDQ06465.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oceanibulbus
indolifex HEL-45]
Length = 186
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 111/176 (63%), Gaps = 17/176 (9%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSGVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVKDPS--WLVIIG 135
GKP+FIR RT+ EI+ + ++S L DP A D +R D + WLV +G
Sbjct: 68 LGKPVFIRRRTEAEIEEAKAVDVSTLPDPIAQNENLSGDVPATDENRALDETGEWLVQMG 127
Query: 136 ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+CTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP +F DE +
Sbjct: 128 VCTHLGCVPLGDAGDFGGWFCPCHGSHYDTAGRIRKGPAPRNLPVPVAEFVDESTI 183
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G+ G V + V ++ M+ SADV A+++I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGT---GAVAVGAAVWPLVNQMNPSADVKALSSIRVDVSGVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
GKP+FIR R
Sbjct: 68 LGKPVFIRRR 77
>gi|90418294|ref|ZP_01226206.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Aurantimonas
manganoxydans SI85-9A1]
gi|90337966|gb|EAS51617.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Aurantimonas
manganoxydans SI85-9A1]
Length = 190
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 100/144 (69%), Gaps = 14/144 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ A LA+A I+VD++ + GQS+T KWRGKP+FIR RT+ EI+ + + +L
Sbjct: 38 FIDQMNPDAATLALAEIDVDVSQVEVGQSITAKWRGKPIFIRQRTEAEIEEARAVPLEEL 97
Query: 116 RDPQA------------DSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D +R D +WLV++G+CTHLGC+P+ N+G + G++CPCHGS
Sbjct: 98 KDPIARNANLSGDAPATDENRATDGKEAWLVMVGVCTHLGCIPLGNSGPFDGWFCPCHGS 157
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF 185
YD +GRIR+GPAPTNM++PPY F
Sbjct: 158 AYDTAGRIRQGPAPTNMDIPPYTF 181
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ A LA+A I+VD++ + GQS+T KWRGKP+FIR R
Sbjct: 38 FIDQMNPDAATLALAEIDVDVSQVEVGQSITAKWRGKPIFIRQR 81
>gi|260574880|ref|ZP_05842882.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sp. SW2]
gi|259022885|gb|EEW26179.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sp. SW2]
Length = 189
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 18/177 (10%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
+ +R TY G G+V + + V I M+ SADVL+++ + VD++ + G +
Sbjct: 8 DSGRRDLLTYATIGA----GVVASGAAVWPMIDQMNPSADVLSLSVLRVDVSGVEVGTQL 63
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP------------QADSDRVKDPS--WL 131
T KWRGKP+FIR RT+ +I ++ +++L DP AD +R D + WL
Sbjct: 64 TVKWRGKPVFIRRRTEADIALGRSIALNELVDPVARNANIARTADAADGNRTIDAAGEWL 123
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V++G+CTHLGCVP+ +AGD+GG++CPCHGSHYD++GRIRKGPAP N+ VP +F D+
Sbjct: 124 VMMGVCTHLGCVPLGDAGDFGGWFCPCHGSHYDSAGRIRKGPAPENLPVPVSKFVDD 180
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
+ +R TY G G+V + + V I M+ SADVL+++ + VD++ + G +
Sbjct: 8 DSGRRDLLTYATIGA----GVVASGAAVWPMIDQMNPSADVLSLSVLRVDVSGVEVGTQL 63
Query: 279 TFKWRGKPLFIRHR 292
T KWRGKP+FIR R
Sbjct: 64 TVKWRGKPVFIRRR 77
>gi|427408442|ref|ZP_18898644.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
yanoikuyae ATCC 51230]
gi|425712752|gb|EKU75766.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
yanoikuyae ATCC 51230]
Length = 188
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 111/177 (62%), Gaps = 11/177 (6%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G++ +R+ F + A + VG V V+ I M+ SADVLA+A+ EVDL+ I GQ
Sbjct: 14 GEDGVRRRDFINIAAVSFAGVGAV---GVILPLIDQMNPSADVLALASTEVDLSAIQPGQ 70
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLG 141
++ +R +PLF+R T KEI + S LRDPQ ++R D WL+ +G+CTHLG
Sbjct: 71 AIKTTFRSQPLFVRQLTDKEIAEADKVDPSTLRDPQTLAERTVDGKKQWLITMGVCTHLG 130
Query: 142 CVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
CVP+ N G++GGY+CPCHGS YD + RIRKGPAP N+EVP Y F D IL+
Sbjct: 131 CVPLGAGEGENRGEFGGYFCPCHGSSYDTAARIRKGPAPKNLEVPKYSFTSDTAILV 187
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G++ +R+ F + A + VG V V+ I M+ SADVLA+A+ EVDL+ I GQ
Sbjct: 14 GEDGVRRRDFINIAAVSFAGVGAV---GVILPLIDQMNPSADVLALASTEVDLSAIQPGQ 70
Query: 277 SVTFKWRGKPLFIRH 291
++ +R +PLF+R
Sbjct: 71 AIKTTFRSQPLFVRQ 85
>gi|403223516|dbj|BAM41646.1| ubiquinol-cytochrome c reductase [Theileria orientalis strain
Shintoku]
Length = 353
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 116/198 (58%), Gaps = 24/198 (12%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDF +YR + T R+A Y++ + +S + + I S D +A
Sbjct: 161 PDFREYRLPKG-------TDRRAAIYLMTASIFFFLLAFIRSSIIKVIHFFWLSKDAVAE 213
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ--------------- 114
T+EV++ + G VT WR KP+FIR RTQ+EI + ++++
Sbjct: 214 GTLEVNVGQMLPGDQVTVNWRKKPVFIRRRTQEEITRARKEDMNKGNYMMRRKDDELLES 273
Query: 115 LRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDAS-GRIRKGP 173
+RDPQ DS+R ++P WL+ I ICTHLGCVP G++GG++CPCHGSHYD+S GRIR GP
Sbjct: 274 MRDPQLDSERNENPEWLINIAICTHLGCVPY-RGGNYGGFFCPCHGSHYDSSVGRIRHGP 332
Query: 174 APTNMEVPPYQFGDEGIL 191
AP N+EVPPY+F D+ +
Sbjct: 333 APANLEVPPYKFIDDNTI 350
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 203 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
PDF +YR + T R+A Y++ + +S + + I S D +A
Sbjct: 161 PDFREYRLPKG-------TDRRAAIYLMTASIFFFLLAFIRSSIIKVIHFFWLSKDAVAE 213
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
T+EV++ + G VT WR KP+FIR R
Sbjct: 214 GTLEVNVGQMLPGDQVTVNWRKKPVFIRRR 243
>gi|335033857|ref|ZP_08527221.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
sp. ATCC 31749]
gi|333794742|gb|EGL66075.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
sp. ATCC 31749]
Length = 192
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 111/180 (61%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y++ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVAAVEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT KEID + L+DP A D DR +W+
Sbjct: 70 VKWRGKPIFIRNRTAKEIDEANAVALGDLKDPVARNANIAPDAQATDIDRSAGQGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLAIPTFAFTSDTVI 189
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y++ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLVTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVAAVEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPIFIRNR 82
>gi|254418573|ref|ZP_05032297.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas sp. BAL3]
gi|196184750|gb|EDX79726.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas sp. BAL3]
Length = 180
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 98/136 (72%), Gaps = 3/136 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID-TEQNTNISQ 114
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+RT E+ + + S
Sbjct: 39 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYRTPAELQRVIADDHASD 98
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L+ PQ D++R K +LV++G CTHLGCVP AGD+GG++CPCHGSHYDASGRIRKG
Sbjct: 99 LKQPQTDAERTKPGHEKYLVVVGSCTHLGCVPTFGAGDYGGWFCPCHGSHYDASGRIRKG 158
Query: 173 PAPTNMEVPPYQFGDE 188
PAP N+ VP Y+F +
Sbjct: 159 PAPLNLVVPDYEFASD 174
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+R
Sbjct: 39 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYR 82
>gi|312114060|ref|YP_004011656.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Rhodomicrobium vannielii ATCC 17100]
gi|311219189|gb|ADP70557.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodomicrobium vannielii ATCC 17100]
Length = 194
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 116/191 (60%), Gaps = 23/191 (12%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D Q + R+ F Y+ ++ V A + + I M+ A L++A+I+VDL +PE
Sbjct: 6 DGDQGDVSRRDFIYLA---TTAFAAVGAAAALWPLIDQMNPDASALSLASIDVDLTPVPE 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK--D 127
G ++T WRGKP+FIRHRT +EI Q ++ L+DP A D++R K
Sbjct: 63 GAAITVLWRGKPVFIRHRTAEEIKKAQAVQLADLKDPYAEVLGAPSDLPATDANRTKAGK 122
Query: 128 PSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
WLV+IGICTHLGCVP A G +GG++CPCHGS YD +GRIR+GPAP N++VPP
Sbjct: 123 EKWLVLIGICTHLGCVPKGQAPGDEKGPYGGWFCPCHGSMYDTAGRIRQGPAPRNLDVPP 182
Query: 183 YQF-GDEGILI 192
YQF D ILI
Sbjct: 183 YQFTADTKILI 193
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D Q + R+ F Y+ ++ V A + + I M+ A L++A+I+VDL +PE
Sbjct: 6 DGDQGDVSRRDFIYLA---TTAFAAVGAAAALWPLIDQMNPDASALSLASIDVDLTPVPE 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
G ++T WRGKP+FIRHR
Sbjct: 63 GAAITVLWRGKPVFIRHR 80
>gi|126734345|ref|ZP_01750092.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. CCS2]
gi|126717211|gb|EBA14075.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. CCS2]
Length = 185
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 17/177 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ T+R Y AG VV +VNQ M+ SADVLA+A+I VD++ + G
Sbjct: 7 HQGTRRDFLYYATAGAGVVVTGAAVWPLVNQ----MNPSADVLALASIRVDVSAVDPGTQ 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD-----------PQADSDR--VKDPSWL 131
+T W+GKP+FIR R+++EI + ++S L D P D +R +D WL
Sbjct: 63 ITVLWQGKPVFIRARSEEEIAEARAVDVSSLPDADANNANLGEVPATDENRALTEDGIWL 122
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V +G+CTHLGCVP+ +AGD+GG++CPCHGSHYD SGRIR+GPAP N+ VP F DE
Sbjct: 123 VQMGVCTHLGCVPLGDAGDFGGWFCPCHGSHYDTSGRIRRGPAPRNLPVPVASFVDE 179
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ T+R Y AG VV +VNQ M+ SADVLA+A+I VD++ + G
Sbjct: 7 HQGTRRDFLYYATAGAGVVVTGAAVWPLVNQ----MNPSADVLALASIRVDVSAVDPGTQ 62
Query: 278 VTFKWRGKPLFIRHR 292
+T W+GKP+FIR R
Sbjct: 63 ITVLWQGKPVFIRAR 77
>gi|302383788|ref|YP_003819611.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Brevundimonas subvibrioides ATCC 15264]
gi|302194416|gb|ADL01988.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas subvibrioides ATCC 15264]
Length = 185
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 94/132 (71%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+SM+ +AD LA++T E D + + EG V W+GKP+F+R+RT E+ Q +S L
Sbjct: 45 LINSMNPAADTLALSTTEFDTSKVQEGMQVVITWQGKPVFVRNRTAAELQKVQADPLSSL 104
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DP+ D DR K LV++G CTHLGC+P +GD+GG++CPCHGSHYDASGRIRKGP
Sbjct: 105 KDPETDQDRTKPGHEPMLVVLGNCTHLGCIPTFGSGDYGGWFCPCHGSHYDASGRIRKGP 164
Query: 174 APTNMEVPPYQF 185
APTN+ VP Y F
Sbjct: 165 APTNLVVPEYAF 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+SM+ +AD LA++T E D + + EG V W+GKP+F+R+R
Sbjct: 45 LINSMNPAADTLALSTTEFDTSKVQEGMQVVITWQGKPVFVRNR 88
>gi|326386422|ref|ZP_08208045.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium nitrogenifigens DSM 19370]
gi|326209083|gb|EGD59877.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium nitrogenifigens DSM 19370]
Length = 187
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 112/167 (67%), Gaps = 10/167 (5%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
E +R+ F + A SV G+ ++V IS MSASADVLA ++ E+D++ I GQ++
Sbjct: 15 EGVRRRDFINVAA--VSVAGVGGLATLV-PLISQMSASADVLAESSTEIDISAIEPGQAI 71
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGCV 143
+R +P+FIR+ TQ+EI N + LRDPQ+ +DR K +WL+ +G+CTHLGCV
Sbjct: 72 KAVFRKQPVFIRNLTQQEIAEANAVNPTTLRDPQSLADRTKPGKSNWLITMGVCTHLGCV 131
Query: 144 PIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
P+ G++GGY+CPCHGS YD + RIRKGPAP N+EVPPY+F
Sbjct: 132 PLGAGQGEVKGEFGGYFCPCHGSVYDTAARIRKGPAPKNLEVPPYEF 178
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
E +R+ F + A SV G+ ++V IS MSASADVLA ++ E+D++ I GQ++
Sbjct: 15 EGVRRRDFINVAA--VSVAGVGGLATLV-PLISQMSASADVLAESSTEIDISAIEPGQAI 71
Query: 279 TFKWRGKPLFIRH 291
+R +P+FIR+
Sbjct: 72 KAVFRKQPVFIRN 84
>gi|58696763|ref|ZP_00372301.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila simulans]
gi|58698210|ref|ZP_00373131.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58535291|gb|EAL59369.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58537048|gb|EAL60182.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Wolbachia
endosymbiont of Drosophila simulans]
Length = 157
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/140 (52%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ SM+ SA+VLA +T+EV+L+ I EG V KW+GKP+FIR RT++EI+ + N+ L
Sbjct: 13 LVKSMNPSAEVLATSTVEVNLSGIQEGHGVKVKWQGKPVFIRRRTKQEIEAARAVNVKSL 72
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAG-DWGGYYCPCHGSHYDASGRIRKG 172
RDPQ D RV + WL++IGICTHLGCVP+ +A D G++CPCHGS+YD SGR+ G
Sbjct: 73 RDPQLDEQRVYEGKDEWLIMIGICTHLGCVPVDHATRDGNGWFCPCHGSYYDTSGRVIGG 132
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP NM VP Y F E +++
Sbjct: 133 PAPKNMVVPDYFFPSENVVV 152
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ SM+ SA+VLA +T+EV+L+ I EG V KW+GKP+FIR R
Sbjct: 13 LVKSMNPSAEVLATSTVEVNLSGIQEGHGVKVKWQGKPVFIRRR 56
>gi|294013039|ref|YP_003546499.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
japonicum UT26S]
gi|292676369|dbj|BAI97887.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
japonicum UT26S]
Length = 193
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 8/154 (5%)
Query: 47 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDT 106
V A +VV + M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH T KEI
Sbjct: 39 VGAVAVVIPLVDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRHLTDKEIAE 98
Query: 107 EQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCH 159
+ + LRDPQ +R D WLV +G+CTHLGCVP+ N G++GGY+CPCH
Sbjct: 99 ADKVDPASLRDPQTLEERTVDGKKQWLVTMGVCTHLGCVPLGAGEGENKGEYGGYFCPCH 158
Query: 160 GSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
GS YD + RIRKGPAP N+EVP + F D IL+
Sbjct: 159 GSSYDTAARIRKGPAPKNLEVPKFSFTSDTAILV 192
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 240 VCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
V A +VV + M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH
Sbjct: 39 VGAVAVVIPLVDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRH 90
>gi|209886112|ref|YP_002289969.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oligotropha
carboxidovorans OM5]
gi|337740326|ref|YP_004632054.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Oligotropha carboxidovorans OM5]
gi|386029343|ref|YP_005950118.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Oligotropha carboxidovorans OM4]
gi|209874308|gb|ACI94104.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oligotropha
carboxidovorans OM5]
gi|336094411|gb|AEI02237.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Oligotropha carboxidovorans OM4]
gi|336097990|gb|AEI05813.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Oligotropha carboxidovorans OM5]
Length = 176
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ +A + A A IEVDL+ I EGQ + WRGKP++I +RT+K+++ + N++
Sbjct: 35 LISQMNPDAATIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNRTKKQVEEARAVNVAT 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ D RVK+ WLV+IGICTHLGC+PIA+ G + G++CPCHGS YD SGRIR+G
Sbjct: 95 LPDPQTDQSRVKEGHDQWLVVIGICTHLGCIPIAHEGSYDGFFCPCHGSVYDTSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPY F
Sbjct: 155 PAPLNLPVPPYAF 167
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ +A + A A IEVDL+ I EGQ + WRGKP++I +R
Sbjct: 35 LISQMNPDAATIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYIMNR 79
>gi|381202685|ref|ZP_09909797.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
yanoikuyae XLDN2-5]
Length = 171
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 109/172 (63%), Gaps = 11/172 (6%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ F + A + VG V V+ I M+ SADVLA+A+ EVDL+ I GQ++
Sbjct: 2 RRRDFINIAAVSFAGVGAV---GVILPLIDQMNPSADVLALASTEVDLSAIQPGQAIKTT 58
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA 146
+R +PLF+R T+KEI + S LRDPQ ++R D WL+ +G+CTHLGCVP+
Sbjct: 59 FRSQPLFVRQLTEKEIAEADKVDPSTLRDPQTLAERTVDGKKQWLITMGVCTHLGCVPLG 118
Query: 147 -----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
N G++GGY+CPCHGS YD + RIRKGPAP N+EVP Y F D IL+
Sbjct: 119 AGEGENRGEFGGYFCPCHGSSYDTAARIRKGPAPKNLEVPKYSFTSDTAILV 170
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ F + A + VG V V+ I M+ SADVLA+A+ EVDL+ I GQ++
Sbjct: 2 RRRDFINIAAVSFAGVGAV---GVILPLIDQMNPSADVLALASTEVDLSAIQPGQAIKTT 58
Query: 282 WRGKPLFIRH 291
+R +PLF+R
Sbjct: 59 FRSQPLFVRQ 68
>gi|150396751|ref|YP_001327218.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium medicae WSM419]
gi|150028266|gb|ABR60383.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium medicae WSM419]
Length = 192
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 115/180 (63%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A +V FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAVAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT+KE++ + + +L+DP A D DR +W+
Sbjct: 70 AKWRGKPVFIRNRTEKEVEEAKAVALEELKDPVARNANLPADAQASDLDRSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLPVPTFSFVSDTVI 189
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A +V FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAVAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 AKWRGKPVFIRNR 82
>gi|429771094|ref|ZP_19303133.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta 470-4]
gi|429182887|gb|EKY23966.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta 470-4]
Length = 181
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+SM+ +AD LA++++EVD + GQ + KWRGKP+FIRHRT KEI + + L
Sbjct: 41 LINSMNPAADTLALSSVEVDYGKVQLGQQIVVKWRGKPVFIRHRTPKEIAEAVADDDAPL 100
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
RDP D+ R K WL++IG+CTHLGC+P GD+GG++CPCHGSHYD +GRIRKGP
Sbjct: 101 RDPATDASRHKPGKAEWLILIGVCTHLGCIPTFGTGDYGGWFCPCHGSHYDTAGRIRKGP 160
Query: 174 APTNMEVPPYQFGDE 188
AP N+ + Y F +E
Sbjct: 161 APKNLYLLDYAFLNE 175
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+SM+ +AD LA++++EVD + GQ + KWRGKP+FIRHR
Sbjct: 41 LINSMNPAADTLALSSVEVDYGKVQLGQQIVVKWRGKPVFIRHR 84
>gi|260431867|ref|ZP_05785838.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Silicibacter
lacuscaerulensis ITI-1157]
gi|260415695|gb|EEX08954.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Silicibacter
lacuscaerulensis ITI-1157]
Length = 200
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 113/176 (64%), Gaps = 17/176 (9%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y AGG+ G+V + V I+ M+ SADV A+++I VD++ + G +T
Sbjct: 22 EGTRRDFLYYAAGGA---GVVATGAAVWPLINQMNPSADVQALSSIRVDVSGVEVGTQIT 78
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP-----------QADSDRVKDPS--WLVI 133
KW GKP+FIR RT++EI + ++ +L DP D +R D + WLV+
Sbjct: 79 VKWLGKPVFIRRRTEEEIQLAREVSLDELPDPIDRNANKPGLPATDENRTLDEAGEWLVM 138
Query: 134 IGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
+G+CTHLGCVP+ + AGD+ G++CPCHGSHYD +GRIRKGPAP N+ VP +F DE
Sbjct: 139 MGVCTHLGCVPLGDGAGDFHGWFCPCHGSHYDTAGRIRKGPAPENLPVPVAEFLDE 194
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y AGG+ G+V + V I+ M+ SADV A+++I VD++ + G +T
Sbjct: 22 EGTRRDFLYYAAGGA---GVVATGAAVWPLINQMNPSADVQALSSIRVDVSGVEVGTQIT 78
Query: 280 FKWRGKPLFIRHR 292
KW GKP+FIR R
Sbjct: 79 VKWLGKPVFIRRR 91
>gi|334346274|ref|YP_004554826.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingobium
chlorophenolicum L-1]
gi|334102896|gb|AEG50320.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
chlorophenolicum L-1]
Length = 191
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 97/145 (66%), Gaps = 8/145 (5%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH T+KEI + S L
Sbjct: 46 LVDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRHLTEKEIAEADKVDASSL 105
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGR 168
RDPQ +R D WLV +G+CTHLGCVP+ N G++GGY+CPCHGS YD + R
Sbjct: 106 RDPQTLEERTVDGKKQWLVTMGVCTHLGCVPLGAGEGENRGEYGGYFCPCHGSSYDTAAR 165
Query: 169 IRKGPAPTNMEVPPYQF-GDEGILI 192
IRKGPAP N+EVP + F D IL+
Sbjct: 166 IRKGPAPKNLEVPKFSFTSDTAILV 190
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
+ M+ SADVLA+A+ EVDL+ I GQ++ +R +PLF+RH
Sbjct: 46 LVDQMNPSADVLALASTEVDLSAIQPGQAIKTTFRSQPLFVRH 88
>gi|149204516|ref|ZP_01881482.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. TM1035]
gi|149142015|gb|EDM30064.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. TM1035]
Length = 200
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 113/186 (60%), Gaps = 24/186 (12%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T+R+ F Y ++ G + A + V I+SM+ SADV A T++VDL+ + GQ +T
Sbjct: 15 TERRDFLYY---ATASTGAIAAGAAVWPLINSMNPSADVTASGTVKVDLSGVEPGQRITV 71
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDP---------------QADSDRV--KDPSW 130
KW+G P+F+ R++ I + ++ QL DP D +R +D W
Sbjct: 72 KWQGHPVFVWRRSEAAIQAARAVDLDQLPDPVDEAGENPNTSGEEPALDENRAAGEDGEW 131
Query: 131 LVIIGICTHLGCVPIAN----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFG 186
LV+IG+CTHLGC+P+ G++GG++CPCHGSHYD SGRIRKGPAP N+++PPY G
Sbjct: 132 LVVIGVCTHLGCIPLGQDGSAVGEFGGWFCPCHGSHYDTSGRIRKGPAPRNLDIPPYDLG 191
Query: 187 DEGILI 192
D+ L+
Sbjct: 192 DDLQLV 197
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T+R+ F Y ++ G + A + V I+SM+ SADV A T++VDL+ + GQ +T
Sbjct: 15 TERRDFLYY---ATASTGAIAAGAAVWPLINSMNPSADVTASGTVKVDLSGVEPGQRITV 71
Query: 281 KWRGKPLFIRHR 292
KW+G P+F+ R
Sbjct: 72 KWQGHPVFVWRR 83
>gi|418054335|ref|ZP_12692391.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Hyphomicrobium denitrificans 1NES1]
gi|353211960|gb|EHB77360.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Hyphomicrobium denitrificans 1NES1]
Length = 190
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 22/178 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F + + VG A S++ FI M+ A +A+++++VDL+ + EGQ++T
Sbjct: 7 EPNRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTMALSSVDVDLSPVKEGQAIT 63
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR--VKDPS------------WLV 132
WRGKP+FIR+RT+ E+++ + ++ L D A +D V DP+ W++
Sbjct: 64 VLWRGKPIFIRNRTKTEVESAVDVDVKTLPDTLARNDALPVDDPATDANRTIKGHENWII 123
Query: 133 IIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
++GICTHLGC+P A G++GG++CPCHGS YD SGRIRKGPAP N+EVPPY F
Sbjct: 124 LVGICTHLGCIPKGQAMGDERGEYGGWFCPCHGSQYDTSGRIRKGPAPRNLEVPPYAF 181
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F + + VG A S++ FI M+ A +A+++++VDL+ + EGQ++T
Sbjct: 7 EPNRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTMALSSVDVDLSPVKEGQAIT 63
Query: 280 FKWRGKPLFIRHR 292
WRGKP+FIR+R
Sbjct: 64 VLWRGKPIFIRNR 76
>gi|418297107|ref|ZP_12908949.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium tumefaciens CCNWGS0286]
gi|355538205|gb|EHH07452.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium tumefaciens CCNWGS0286]
Length = 167
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 99/151 (65%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT+KEI+ + + L
Sbjct: 14 FIDQMRPDASTLALASIEVDVTAVEPGMSLTVKWRGKPIFIRNRTEKEIEEAKAVALGDL 73
Query: 116 RDPQA------------DSDRVK---DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D DR +W+V+IG CTHLGCVP+ AGD+GG++CPCHG
Sbjct: 74 KDPVARNANVAPDAQATDIDRSAGEGKENWIVMIGSCTHLGCVPLGQAGDFGGWFCPCHG 133
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SHYD +GRIRKGPAP N+ +P + F + ++
Sbjct: 134 SHYDTAGRIRKGPAPENLAIPTFAFTSDTVI 164
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 14 FIDQMRPDASTLALASIEVDVTAVEPGMSLTVKWRGKPIFIRNR 57
>gi|115522973|ref|YP_779884.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
gi|115516920|gb|ABJ04904.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
Length = 175
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
+A + A A IEVDL I GQ + WRG+P++I +RT K+++ + +S L DPQ+D
Sbjct: 42 AATIAAGAPIEVDLTPIASGQDIKVFWRGQPIYILNRTAKQVEEARAVALSSLPDPQSDQ 101
Query: 123 DRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
DR KD WLV++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+GPAP N+ V
Sbjct: 102 DRTKDGHEQWLVVVGICTHLGCIPIAHEGKYDGFFCPCHGSQYDSSGRIRQGPAPANLPV 161
Query: 181 PPYQF 185
PPYQF
Sbjct: 162 PPYQF 166
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 256 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A + A A IEVDL I GQ + WRG+P++I +R
Sbjct: 42 AATIAAGAPIEVDLTPIASGQDIKVFWRGQPIYILNR 78
>gi|346995061|ref|ZP_08863133.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria sp.
TW15]
Length = 194
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 27/188 (14%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y +AGG+ G+V + V ++ M+ SADV A+++I VD++ + G +T
Sbjct: 8 EGTRRDFLYYVAGGA---GVVATGAAVWPLVNQMNPSADVQALSSIRVDVSGVETGTQLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDT--EQNT-NISQLRDPQA------------DSDRVKDPS-- 129
KW GKP+FIRHRT EI EQ+ + L DP A D++RV PS
Sbjct: 65 VKWLGKPVFIRHRTGAEIQEAKEQDAEGVDALPDPLARNFNIAADAPATDANRVM-PSPE 123
Query: 130 ------WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
W+V +G+CTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VPP
Sbjct: 124 GEAPGAWIVQMGVCTHLGCVPLGDAGDFGGWFCPCHGSHYDLAGRIRKGPAPENLPVPPA 183
Query: 184 QFGDEGIL 191
++ D +
Sbjct: 184 EWVDNSTI 191
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y +AGG+ G+V + V ++ M+ SADV A+++I VD++ + G +T
Sbjct: 8 EGTRRDFLYYVAGGA---GVVATGAAVWPLVNQMNPSADVQALSSIRVDVSGVETGTQLT 64
Query: 280 FKWRGKPLFIRHR 292
KW GKP+FIRHR
Sbjct: 65 VKWLGKPVFIRHR 77
>gi|414171722|ref|ZP_11426633.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia
broomeae ATCC 49717]
gi|410893397|gb|EKS41187.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Afipia
broomeae ATCC 49717]
Length = 175
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 107/162 (66%), Gaps = 6/162 (3%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 85
E R+ F Y+ G + VG A +V IS M+ A +A A IEVDL I GQ +
Sbjct: 8 EPTRRDFLYVATGSVAAVG---AAAVAWPLISQMNPDASTIAAGAPIEVDLTPIATGQDI 64
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCV 143
WRGKP++I +RT+K+ID + + L DPQ+D RVK+ WLV+IGICTHLGC+
Sbjct: 65 KVFWRGKPIYIMNRTKKQIDEARAVPTASLPDPQSDQSRVKEGHDQWLVVIGICTHLGCI 124
Query: 144 PIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
PIA+ G + G++CPCHGS YD+SGRIR+GPAP N+ VPPY F
Sbjct: 125 PIAHEGSYDGFFCPCHGSQYDSSGRIRQGPAPANLPVPPYSF 166
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 278
E R+ F Y+ G + VG A +V IS M+ A +A A IEVDL I GQ +
Sbjct: 8 EPTRRDFLYVATGSVAAVG---AAAVAWPLISQMNPDASTIAAGAPIEVDLTPIATGQDI 64
Query: 279 TFKWRGKPLFIRHR 292
WRGKP++I +R
Sbjct: 65 KVFWRGKPIYIMNR 78
>gi|15965572|ref|NP_385925.1| ubiquinol-cytochrome C reductase iron-sulfur subunit protein
[Sinorhizobium meliloti 1021]
gi|334316454|ref|YP_004549073.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
meliloti AK83]
gi|384529639|ref|YP_005713727.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti BL225C]
gi|384536031|ref|YP_005720116.1| ubiquinol-cytochrome C reductase IRON-sulfur subunit protein
[Sinorhizobium meliloti SM11]
gi|407720761|ref|YP_006840423.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
meliloti Rm41]
gi|418403790|ref|ZP_12977270.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti CCNWSX0020]
gi|433613604|ref|YP_007190402.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti GR4]
gi|15074753|emb|CAC46398.1| Probable ubiquinol-cytochrome C reductase iron-sulfur subunit
[Sinorhizobium meliloti 1021]
gi|333811815|gb|AEG04484.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti BL225C]
gi|334095448|gb|AEG53459.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti AK83]
gi|336032923|gb|AEH78855.1| ubiquinol-cytochrome C reductase IRON-sulfur subunit protein
[Sinorhizobium meliloti SM11]
gi|359502279|gb|EHK74861.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti CCNWSX0020]
gi|407318993|emb|CCM67597.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
meliloti Rm41]
gi|429551794|gb|AGA06803.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sinorhizobium meliloti GR4]
Length = 192
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRG+P+FIR+RT KE++ + + +L+DP A D DR +W+
Sbjct: 70 AKWRGRPVFIRNRTDKEVEEAKAVALEELKDPVARNANLPADAEASDLDRSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+++G+CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 130 IMVGVCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLAVPTFSFVSDTVI 189
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+FIR+R
Sbjct: 70 AKWRGRPVFIRNR 82
>gi|6492247|gb|AAF14234.1|AF109172_1 ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
galegae]
Length = 192
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 115/190 (60%), Gaps = 19/190 (10%)
Query: 18 DRNPDKGQ-EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 76
+ NP +G E R+ F Y+ G + G V A +V FI M A LA+A+IEV++
Sbjct: 3 EHNPKEGTLSEPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVNV 59
Query: 77 NLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------- 126
+ G S+T KWRGKP+FIR+RT KE++ +S L+DP A + +
Sbjct: 60 AALQPGMSLTVKWRGKPVFIRNRTPKELEEADAVALSDLKDPVARNANIAADAEATGLDR 119
Query: 127 -----DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVP 181
+W+V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P
Sbjct: 120 SAGEGKENWIVMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLAIP 179
Query: 182 PYQFGDEGIL 191
+ F + ++
Sbjct: 180 TFAFASDTVI 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 211 DRNPDKGQ-EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDL 269
+ NP +G E R+ F Y+ G + G V A +V FI M A LA+A+IEV++
Sbjct: 3 EHNPKEGTLSEPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVNV 59
Query: 270 NLIPEGQSVTFKWRGKPLFIRHR 292
+ G S+T KWRGKP+FIR+R
Sbjct: 60 AALQPGMSLTVKWRGKPVFIRNR 82
>gi|325293600|ref|YP_004279464.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
sp. H13-3]
gi|418407225|ref|ZP_12980543.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium tumefaciens 5A]
gi|325061453|gb|ADY65144.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
sp. H13-3]
gi|358006369|gb|EHJ98693.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium tumefaciens 5A]
Length = 192
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/187 (44%), Positives = 115/187 (61%), Gaps = 19/187 (10%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
N D E T+R F Y++ G + G V A +V FI M A LA+A+IEV++ +
Sbjct: 7 NHDASGEPTRRD-FLYLVTG---MTGAVGAAAVAWPFIDQMRPDASTLALASIEVNVAAV 62
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK- 126
G S+T KWRGKP+FIR+RT+KEI ++ L+DP A D DR
Sbjct: 63 EPGMSLTVKWRGKPIFIRNRTEKEIGEANAVALADLKDPVARNANIAPDAQATDIDRSAG 122
Query: 127 --DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
+W+V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P +
Sbjct: 123 QGKENWIVMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLAIPTFA 182
Query: 185 FGDEGIL 191
F + ++
Sbjct: 183 FTSDTVI 189
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
N D E T+R F Y++ G + G V A +V FI M A LA+A+IEV++ +
Sbjct: 7 NHDASGEPTRRD-FLYLVTG---MTGAVGAAAVAWPFIDQMRPDASTLALASIEVNVAAV 62
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
G S+T KWRGKP+FIR+R
Sbjct: 63 EPGMSLTVKWRGKPIFIRNR 82
>gi|265984585|ref|ZP_06097320.1| Rieske Fe-S protein [Brucella sp. 83/13]
gi|306837934|ref|ZP_07470794.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella sp.
NF 2653]
gi|264663177|gb|EEZ33438.1| Rieske Fe-S protein [Brucella sp. 83/13]
gi|306407022|gb|EFM63241.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella sp.
NF 2653]
Length = 187
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------PSWL 131
KWRGKP+FIR+RT KE++ + T + L+DP A + + +WL
Sbjct: 65 VKWRGKPVFIRNRTAKEVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGRENWL 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 125 VMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTSDTVI 184
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPVFIRNR 77
>gi|23502411|ref|NP_698538.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis 1330]
gi|62290428|ref|YP_222221.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82700351|ref|YP_414925.1| Rieske iron-sulfur domain-containing protein [Brucella melitensis
biovar Abortus 2308]
gi|148558924|ref|YP_001259419.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
ovis ATCC 25840]
gi|161619488|ref|YP_001593375.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
canis ATCC 23365]
gi|163843799|ref|YP_001628203.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis ATCC 23445]
gi|189024657|ref|YP_001935425.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
abortus S19]
gi|225853023|ref|YP_002733256.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Brucella
melitensis ATCC 23457]
gi|256263497|ref|ZP_05466029.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis bv. 2 str. 63/9]
gi|256369959|ref|YP_003107470.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
microti CCM 4915]
gi|260546963|ref|ZP_05822702.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
abortus NCTC 8038]
gi|260565235|ref|ZP_05835719.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis bv. 1 str. 16M]
gi|260565961|ref|ZP_05836431.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella suis
bv. 4 str. 40]
gi|260755261|ref|ZP_05867609.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 6 str. 870]
gi|260758482|ref|ZP_05870830.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 4 str. 292]
gi|260762307|ref|ZP_05874650.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 2 str.
86/8/59]
gi|260884276|ref|ZP_05895890.1| Rieske Fe-S protein [Brucella abortus bv. 9 str. C68]
gi|261214525|ref|ZP_05928806.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 3 str.
Tulya]
gi|261219670|ref|ZP_05933951.1| Rieske Fe-S protein [Brucella ceti M13/05/1]
gi|261222682|ref|ZP_05936963.1| Rieske Fe-S protein [Brucella ceti B1/94]
gi|261315714|ref|ZP_05954911.1| Rieske Fe-S protein [Brucella pinnipedialis M163/99/10]
gi|261318152|ref|ZP_05957349.1| Rieske Fe-S protein [Brucella pinnipedialis B2/94]
gi|261322559|ref|ZP_05961756.1| Rieske Fe-S protein [Brucella ceti M644/93/1]
gi|261325603|ref|ZP_05964800.1| Rieske Fe-S protein [Brucella neotomae 5K33]
gi|261752832|ref|ZP_05996541.1| Rieske Fe-S protein [Brucella suis bv. 5 str. 513]
gi|261755490|ref|ZP_05999199.1| Rieske Fe-S protein [Brucella suis bv. 3 str. 686]
gi|261758721|ref|ZP_06002430.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella sp.
F5/99]
gi|265989183|ref|ZP_06101740.1| Rieske Fe-S protein [Brucella pinnipedialis M292/94/1]
gi|265991597|ref|ZP_06104154.1| Rieske Fe-S protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265995435|ref|ZP_06107992.1| Rieske Fe-S protein [Brucella melitensis bv. 3 str. Ether]
gi|265998646|ref|ZP_06111203.1| Rieske Fe-S protein [Brucella ceti M490/95/1]
gi|297248814|ref|ZP_06932532.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 5 str. B3196]
gi|306844544|ref|ZP_07477133.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
inopinata BO1]
gi|340791151|ref|YP_004756616.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
pinnipedialis B2/94]
gi|376272725|ref|YP_005151303.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus A13334]
gi|376275843|ref|YP_005116282.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
canis HSK A52141]
gi|376281203|ref|YP_005155209.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis VBI22]
gi|384211904|ref|YP_005600986.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
melitensis M5-90]
gi|384225197|ref|YP_005616361.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis 1330]
gi|384409015|ref|YP_005597636.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis M28]
gi|423166395|ref|ZP_17153098.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI435a]
gi|423171231|ref|ZP_17157906.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI474]
gi|423172687|ref|ZP_17159358.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI486]
gi|423178620|ref|ZP_17165264.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI488]
gi|423180662|ref|ZP_17167303.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI010]
gi|423183793|ref|ZP_17170430.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI016]
gi|423185267|ref|ZP_17171881.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI021]
gi|423188402|ref|ZP_17175012.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI259]
gi|4104452|gb|AAD02046.1| Rieske Fe-S protein [Brucella abortus]
gi|23348397|gb|AAN30453.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis 1330]
gi|62196560|gb|AAX74860.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. 9-941]
gi|82616452|emb|CAJ11515.1| Rieske iron-sulfur protein:Rieske [2Fe-2S] domain:Twin-arginine
translocation pathway signal:Ubiquinol-cytochrome c
reductase [Brucella melitensis biovar Abortus 2308]
gi|148370181|gb|ABQ60160.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
ovis ATCC 25840]
gi|161336299|gb|ABX62604.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
canis ATCC 23365]
gi|163674522|gb|ABY38633.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis ATCC 23445]
gi|189020229|gb|ACD72951.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
abortus S19]
gi|225641388|gb|ACO01302.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
melitensis ATCC 23457]
gi|256000122|gb|ACU48521.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
microti CCM 4915]
gi|260096013|gb|EEW79890.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
abortus NCTC 8038]
gi|260151303|gb|EEW86397.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis bv. 1 str. 16M]
gi|260155479|gb|EEW90559.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella suis
bv. 4 str. 40]
gi|260668800|gb|EEX55740.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 4 str. 292]
gi|260672739|gb|EEX59560.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 2 str.
86/8/59]
gi|260675369|gb|EEX62190.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 6 str. 870]
gi|260873804|gb|EEX80873.1| Rieske Fe-S protein [Brucella abortus bv. 9 str. C68]
gi|260916132|gb|EEX82993.1| ubiquinol-cytochrome c reductase [Brucella abortus bv. 3 str.
Tulya]
gi|260921266|gb|EEX87919.1| Rieske Fe-S protein [Brucella ceti B1/94]
gi|260924759|gb|EEX91327.1| Rieske Fe-S protein [Brucella ceti M13/05/1]
gi|261295249|gb|EEX98745.1| Rieske Fe-S protein [Brucella ceti M644/93/1]
gi|261297375|gb|EEY00872.1| Rieske Fe-S protein [Brucella pinnipedialis B2/94]
gi|261301583|gb|EEY05080.1| Rieske Fe-S protein [Brucella neotomae 5K33]
gi|261304740|gb|EEY08237.1| Rieske Fe-S protein [Brucella pinnipedialis M163/99/10]
gi|261738705|gb|EEY26701.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella sp.
F5/99]
gi|261742585|gb|EEY30511.1| Rieske Fe-S protein [Brucella suis bv. 5 str. 513]
gi|261745243|gb|EEY33169.1| Rieske Fe-S protein [Brucella suis bv. 3 str. 686]
gi|262553270|gb|EEZ09104.1| Rieske Fe-S protein [Brucella ceti M490/95/1]
gi|262766548|gb|EEZ12337.1| Rieske Fe-S protein [Brucella melitensis bv. 3 str. Ether]
gi|263002381|gb|EEZ14956.1| Rieske Fe-S protein [Brucella melitensis bv. 1 str. Rev.1]
gi|263093520|gb|EEZ17554.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis bv. 2 str. 63/9]
gi|264661380|gb|EEZ31641.1| Rieske Fe-S protein [Brucella pinnipedialis M292/94/1]
gi|297175983|gb|EFH35330.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 5 str. B3196]
gi|306275155|gb|EFM56911.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
inopinata BO1]
gi|326409562|gb|ADZ66627.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Brucella
melitensis M28]
gi|326539267|gb|ADZ87482.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
melitensis M5-90]
gi|340559610|gb|AEK54848.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
pinnipedialis B2/94]
gi|343383377|gb|AEM18869.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis 1330]
gi|358258802|gb|AEU06537.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
suis VBI22]
gi|363400330|gb|AEW17300.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus A13334]
gi|363404409|gb|AEW14704.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
canis HSK A52141]
gi|374538565|gb|EHR10073.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI474]
gi|374543879|gb|EHR15357.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI435a]
gi|374544206|gb|EHR15683.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI486]
gi|374545401|gb|EHR16864.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI488]
gi|374548193|gb|EHR19645.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI010]
gi|374548621|gb|EHR20069.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI016]
gi|374558964|gb|EHR30353.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI259]
gi|374559977|gb|EHR31360.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus bv. 1 str. NI021]
Length = 187
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRGKP+FIR+RT KE++ + T + L+DP A + + +WL
Sbjct: 65 VKWRGKPVFIRNRTAKEVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWL 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 125 VMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTSDTVI 184
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPVFIRNR 77
>gi|17986756|ref|NP_539390.1| ubiquinol-cytochrome C reductase IRON-sulfur subunit [Brucella
melitensis bv. 1 str. 16M]
gi|225627986|ref|ZP_03786022.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
ceti str. Cudo]
gi|237815937|ref|ZP_04594934.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus str. 2308 A]
gi|17982384|gb|AAL51654.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Brucella
melitensis bv. 1 str. 16M]
gi|225617149|gb|EEH14195.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
ceti str. Cudo]
gi|237789235|gb|EEP63446.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella
abortus str. 2308 A]
Length = 193
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 14 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 70
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRGKP+FIR+RT KE++ + T + L+DP A + + +WL
Sbjct: 71 VKWRGKPVFIRNRTAKEVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWL 130
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 131 VMIGVCTHLGCVPLGESGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTSDTVI 190
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 14 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLT 70
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 71 VKWRGKPVFIRNR 83
>gi|407780086|ref|ZP_11127333.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor pacificus pht-3B]
gi|407298084|gb|EKF17229.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor pacificus pht-3B]
Length = 187
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+RT EI+ + + L
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNRTDAEIEEAKAVALEDL 93
Query: 116 RDPQA------------DSDRVK---DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D DR +WLV++G+CTHLGCVP+ AGD+GG++CPCHG
Sbjct: 94 KDPVARNANIAADAPATDLDRSAGEGKENWLVMVGVCTHLGCVPLGQAGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SHYD +GRIRKGPAPTN+EVP ++F + ++
Sbjct: 154 SHYDTAGRIRKGPAPTNLEVPTFEFVSDTVI 184
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+R
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNR 77
>gi|359789653|ref|ZP_09292589.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium alhagi CCNWXJ12-2]
gi|359254450|gb|EHK57458.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium alhagi CCNWXJ12-2]
Length = 187
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A +V FI M A LA+ATIEVD++ + G S+T
Sbjct: 8 EPTRRDFLYVATG---MAGVVGAGAVAWPFIDQMRPDASTLALATIEVDVSALQPGMSLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRG+P+FIR+RT +EI+ + ++ +L+DP A D DR +W+
Sbjct: 65 AKWRGRPVFIRNRTPEEIEAAKAVSLDELKDPVARNANIAGDAPATDLDRSAGEGKENWI 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G+CTHLGCVP+ GD+GG++CPCHGSHYD +GR+RKGPAP N+ +P +QF
Sbjct: 125 VMVGVCTHLGCVPLGQQGDFGGWFCPCHGSHYDTAGRVRKGPAPENLAIPTFQF 178
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A +V FI M A LA+ATIEVD++ + G S+T
Sbjct: 8 EPTRRDFLYVATG---MAGVVGAGAVAWPFIDQMRPDASTLALATIEVDVSALQPGMSLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+FIR+R
Sbjct: 65 AKWRGRPVFIRNR 77
>gi|254796972|ref|YP_003081809.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Neorickettsia risticii str. Illinois]
gi|254590218|gb|ACT69580.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Neorickettsia risticii str. Illinois]
Length = 173
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 101/139 (72%), Gaps = 4/139 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ S SADVLA AT EVD++ + GQSV W+GKP++IR+RT++EI +N +++ L
Sbjct: 29 LLKSFGPSADVLATATREVDISNVGAGQSVKVLWQGKPVYIRNRTEEEIKMARNADLTSL 88
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DP+ D+ RVK +WLV++G+CTHLGCVP++N G ++CPCHGSHYD SGR+ GP
Sbjct: 89 KDPERDAVRVKPNKENWLVVVGVCTHLGCVPLSNTD--GTFFCPCHGSHYDTSGRVVSGP 146
Query: 174 APTNMEVPPYQFGDEGILI 192
APTN+ VP Y F ++ +I
Sbjct: 147 APTNLVVPDYYFVNDTTVI 165
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ S SADVLA AT EVD++ + GQSV W+GKP++IR+R
Sbjct: 29 LLKSFGPSADVLATATREVDISNVGAGQSVKVLWQGKPVYIRNR 72
>gi|424882658|ref|ZP_18306290.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WU95]
gi|392519021|gb|EIW43753.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WU95]
Length = 192
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ G + VG V +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGMGEPTRRDFLYLTTGMAGAVGAV---TVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------D 127
S+T KWRGKP+FIR+RT +E+ + +S L+DP A + +
Sbjct: 66 MSLTVKWRGKPIFIRNRTPEEVTAAADVPLSDLKDPIARNANLPVDAQATGVDRSGGKGK 125
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 126 ENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ G + VG V +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGMGEPTRRDFLYLTTGMAGAVGAV---TVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 66 MSLTVKWRGKPIFIRNR 82
>gi|417859341|ref|ZP_12504397.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
tumefaciens F2]
gi|338822405|gb|EGP56373.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Agrobacterium
tumefaciens F2]
Length = 167
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT+KEI+ + + L
Sbjct: 14 FIDQMRPDASTLALASIEVDVAAVEPGMSLTVKWRGKPIFIRNRTEKEIEEAKAVALGDL 73
Query: 116 RDPQA------------DSDRVK---DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D DR +W+V++G CTHLGCVP+ AGD+GG++CPCHG
Sbjct: 74 KDPVARNANIAADAQATDIDRSAGQGKENWIVMVGSCTHLGCVPLGQAGDFGGWFCPCHG 133
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SHYD +GRIRKGPAP N+ +P + F + ++
Sbjct: 134 SHYDTAGRIRKGPAPQNLAIPTFAFTSDTVI 164
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 14 FIDQMRPDASTLALASIEVDVAAVEPGMSLTVKWRGKPIFIRNR 57
>gi|452751091|ref|ZP_21950837.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [alpha
proteobacterium JLT2015]
gi|451961241|gb|EMD83651.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [alpha
proteobacterium JLT2015]
Length = 189
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 98/137 (71%), Gaps = 7/137 (5%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ M+ SADVLA+A++EVD+ I GQ + WRGKP+FIRH T++EI Q +++ L
Sbjct: 44 FVDQMNPSADVLALASVEVDVAPIAVGQGIKVSWRGKPVFIRHLTEREIAEAQAVDVASL 103
Query: 116 RDPQADSDRVKDP--SWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGR 168
RDP +R ++ +L+ IG+CTHLGC+P+ A GD+ GY+CPCHGSHYD++GR
Sbjct: 104 RDPATFDERTQEGHRQYLIQIGVCTHLGCIPMGVADGEPKGDYDGYFCPCHGSHYDSAGR 163
Query: 169 IRKGPAPTNMEVPPYQF 185
IRKGPAP N+ +P Y+F
Sbjct: 164 IRKGPAPKNLVLPDYEF 180
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
F+ M+ SADVLA+A++EVD+ I GQ + WRGKP+FIRH
Sbjct: 44 FVDQMNPSADVLALASVEVDVAPIAVGQGIKVSWRGKPVFIRH 86
>gi|378826143|ref|YP_005188875.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
fredii HH103]
gi|365179195|emb|CCE96050.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
fredii HH103]
Length = 192
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 113/180 (62%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT KE++ + + +L+DP A D DR +W+
Sbjct: 70 AKWRGKPVFIRNRTDKEVEEAKAVPLDELKDPVARNANLTTDAQATDLDRSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLAVPTFSFVSDTVI 189
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 AKWRGKPVFIRNR 82
>gi|222086607|ref|YP_002545141.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium radiobacter K84]
gi|398378244|ref|ZP_10536410.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. AP16]
gi|221724055|gb|ACM27211.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Agrobacterium radiobacter K84]
gi|397725457|gb|EJK85908.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. AP16]
Length = 192
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 97/148 (65%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+RTQKEID + IS L
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTVKWRGKPVFIRNRTQKEIDDGKGAQISDL 98
Query: 116 RDPQADSDRVK---------------DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A + + +WLV+IG+CTHLGC+P+ AG++GG++CPCHG
Sbjct: 99 KDPVARNANLPADAQATDVARSAGDGKENWLVMIGVCTHLGCIPLGQAGEYGGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
S YD +GRIR GPAP N+ +P Y F E
Sbjct: 159 SVYDTAGRIRHGPAPQNLAIPLYAFTAE 186
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTVKWRGKPVFIRNR 82
>gi|398386206|ref|ZP_10544209.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
sp. AP49]
gi|397718574|gb|EJK79160.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingobium
sp. AP49]
Length = 188
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 11/177 (6%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G++ +R+ F + A + VG V VV I M+ SADVLA+AT VDL+ I G
Sbjct: 14 GEDGVRRRDFINVAAVSFAGVGAV---GVVLPLIDQMNPSADVLALATTPVDLSAIQPGM 70
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLG 141
++ +R +PLF+R T+KEI + S LRDPQ +R D WL+ +G+CTHLG
Sbjct: 71 AIKTTFRSQPLFVRQLTEKEIAEADKVDPSTLRDPQTLEERTVDGKKQWLITMGVCTHLG 130
Query: 142 CVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
CVP+ N G++GGY+CPCHGS YD + RIRKGPAP N+EVP Y F D IL+
Sbjct: 131 CVPLGAGEGENRGEFGGYFCPCHGSSYDTAARIRKGPAPKNLEVPKYSFTSDTAILV 187
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G++ +R+ F + A + VG V VV I M+ SADVLA+AT VDL+ I G
Sbjct: 14 GEDGVRRRDFINVAAVSFAGVGAV---GVVLPLIDQMNPSADVLALATTPVDLSAIQPGM 70
Query: 277 SVTFKWRGKPLFIRH 291
++ +R +PLF+R
Sbjct: 71 AIKTTFRSQPLFVRQ 85
>gi|306843109|ref|ZP_07475731.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella sp.
BO2]
gi|384445575|ref|YP_005604294.1| ubiquinol-cytochrome C reductase IRON-sulfur subunit [Brucella
melitensis NI]
gi|306286714|gb|EFM58267.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Brucella sp.
BO2]
gi|349743564|gb|AEQ09107.1| ubiquinol-cytochrome C reductase IRON-sulfur subunit [Brucella
melitensis NI]
Length = 167
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 102/164 (62%), Gaps = 15/164 (9%)
Query: 43 VVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQK 102
+ G+V + FI M A LA A+IEVD++ + EG S+T KWRGKP+FIR+RT K
Sbjct: 1 MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLTVKWRGKPVFIRNRTAK 60
Query: 103 EIDTEQNTNISQLRDPQADSDRV---------------KDPSWLVIIGICTHLGCVPIAN 147
E++ + T + L+DP A + + +WLV+IG+CTHLGCVP+
Sbjct: 61 EVEESKTTALGDLKDPNARNANLPTDAEATDLARSAGEGKENWLVMIGVCTHLGCVPLGE 120
Query: 148 AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 121 SGAFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFTSDTVI 164
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 236 VVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ G+V + FI M A LA A+IEVD++ + EG S+T KWRGKP+FIR+R
Sbjct: 1 MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLAEGASLTVKWRGKPVFIRNR 57
>gi|227822220|ref|YP_002826191.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Sinorhizobium
fredii NGR234]
gi|227341220|gb|ACP25438.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Sinorhizobium
fredii NGR234]
Length = 192
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 113/180 (62%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT KE++ + + +L+DP A D DR +W+
Sbjct: 70 AKWRGKPVFIRNRTDKEVEDAKAVPLDELKDPVARNANLTTDAQATDLDRSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLAVPTFSFVSDTVI 189
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 AKWRGKPVFIRNR 82
>gi|398353930|ref|YP_006399394.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Sinorhizobium fredii USDA 257]
gi|390129256|gb|AFL52637.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Sinorhizobium fredii USDA 257]
Length = 192
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 113/180 (62%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVK---DPSWL 131
KWRGKP+FIR+RT KE++ + + +L+DP A D DR +W+
Sbjct: 70 AKWRGKPVFIRNRTDKEVEDAKAVPLEELKDPVARNANLTTDAQATDLDRSAGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 130 VMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLAVPTFTFVSDTVI 189
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V A + FI M A LA+A+IEVD++ + G S+T
Sbjct: 13 EPTRRDFLYLATG---MAGVVGAGAAAWPFIDQMRPDASTLALASIEVDVSSLQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 AKWRGKPVFIRNR 82
>gi|148554316|ref|YP_001261898.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
wittichii RW1]
gi|148499506|gb|ABQ67760.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
wittichii RW1]
Length = 188
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 108/170 (63%), Gaps = 10/170 (5%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ F + A + VG A +V+ I+ M+ SADVLA+A+IEVD++ I EGQ++
Sbjct: 19 RRRDFINLAAVSFAGVG---AATVLLPLINQMNPSADVLALASIEVDISAIKEGQAIKTI 75
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA 146
+R +PLF+RH T EI + S LRDPQ R D WL+ +G+CTHLGCVP+
Sbjct: 76 FRKQPLFVRHLTGAEIAAADKVDPSTLRDPQTLEQRTVDGKKQWLITMGVCTHLGCVPLG 135
Query: 147 NA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
G++GGY+CPCHGS YD + RIRKGPAP N+EVP Y F + ++
Sbjct: 136 AGEGEIRGEFGGYFCPCHGSSYDTAARIRKGPAPKNLEVPKYAFKSDTVV 185
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ F + A + VG A +V+ I+ M+ SADVLA+A+IEVD++ I EGQ++
Sbjct: 19 RRRDFINLAAVSFAGVG---AATVLLPLINQMNPSADVLALASIEVDISAIKEGQAIKTI 75
Query: 282 WRGKPLFIRH 291
+R +PLF+RH
Sbjct: 76 FRKQPLFVRH 85
>gi|298292454|ref|YP_003694393.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Starkeya
novella DSM 506]
gi|296928965|gb|ADH89774.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Starkeya
novella DSM 506]
Length = 195
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 98/146 (67%), Gaps = 16/146 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FIS + A VLA+++ EVDL+ I EGQ VT KWRGKP+F+ +RT +I+ + T IS L
Sbjct: 41 FISQLQPDASVLALSSTEVDLSQIQEGQIVTVKWRGKPVFVWNRTAADIEKAKATEISAL 100
Query: 116 RDPQA------------DSDRVKD----PSWLVIIGICTHLGCVPIANAGDWGGYYCPCH 159
DP A D +R + WLV+IGICTHLGCVPI + G++ G++CPCH
Sbjct: 101 IDPVARNANLPAEAPATDQNRAAEGEGREKWLVVIGICTHLGCVPIGHMGEFDGWFCPCH 160
Query: 160 GSHYDASGRIRKGPAPTNMEVPPYQF 185
GS YD++GR+R+GPAP N+ VPPY F
Sbjct: 161 GSEYDSAGRVRRGPAPENLAVPPYSF 186
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS + A VLA+++ EVDL+ I EGQ VT KWRGKP+F+ +R
Sbjct: 41 FISQLQPDASVLALSSTEVDLSQIQEGQIVTVKWRGKPVFVWNR 84
>gi|227818949|ref|YP_002822920.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
fredii NGR234]
gi|227337948|gb|ACP22167.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
fredii NGR234]
Length = 183
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 112/184 (60%), Gaps = 23/184 (12%)
Query: 15 YRRDRNPDKGQ-------EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+R + P+KG E ++ F Y++ + V+G+ A FI M A L
Sbjct: 13 HREECYPEKGSVSCDDETAEPTKREFLYLVTAMAGVMGVAAASW---PFIDQMRPDASTL 69
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA+IEVD++ + EG S+T +WRG+P+FIR+RTQ D ++ +
Sbjct: 70 AMASIEVDVSSLVEGVSLTVQWRGRPVFIRNRTQPATDLARSAGEGR------------- 116
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
+W+V+IG+CTHLGCVP+ AGD+GG+ CPCHGSHYD +GRIRKGPAP N+ +P ++F
Sbjct: 117 ENWIVMIGVCTHLGCVPLGQAGDFGGWLCPCHGSHYDTAGRIRKGPAPENLAIPRFEFVS 176
Query: 188 EGIL 191
E ++
Sbjct: 177 EAVV 180
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 208 YRRDRNPDKGQ-------EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+R + P+KG E ++ F Y++ + V+G+ A FI M A L
Sbjct: 13 HREECYPEKGSVSCDDETAEPTKREFLYLVTAMAGVMGVAAASW---PFIDQMRPDASTL 69
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA+IEVD++ + EG S+T +WRG+P+FIR+R
Sbjct: 70 AMASIEVDVSSLVEGVSLTVQWRGRPVFIRNR 101
>gi|222149351|ref|YP_002550308.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
vitis S4]
gi|221736335|gb|ACM37298.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Agrobacterium
vitis S4]
Length = 217
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 110/177 (62%), Gaps = 18/177 (10%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E R+ F Y+ G + G V A +V FI M A LA+A+IEVD++ + G
Sbjct: 35 GAGEPTRRDFLYLATG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVSALQPGM 91
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------P 128
S+T KWRGKP+FIR+RT KE++ + I+QL+DP A + D
Sbjct: 92 SLTVKWRGKPVFIRNRTDKEVEEAKGVPIAQLKDPVARNANAGDDAQATDLARSAGQGKE 151
Query: 129 SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++GG++CPCHGS YD +GRIRKGPAP N+ +P Y F
Sbjct: 152 NWIVMIGSCTHLGCVPLGQAGEYGGWFCPCHGSVYDTAGRIRKGPAPENLHIPNYGF 208
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E R+ F Y+ G + G V A +V FI M A LA+A+IEVD++ + G
Sbjct: 35 GAGEPTRRDFLYLATG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVSALQPGM 91
Query: 277 SVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 92 SLTVKWRGKPVFIRNR 107
>gi|316932553|ref|YP_004107535.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris DX-1]
gi|315600267|gb|ADU42802.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris DX-1]
Length = 177
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 84
E+ R+ Y+ G + VG ++V FIS ++ A +A +EVDL + EGQ
Sbjct: 7 EQPNRRDVLYLATGALATVGTA---ALVWPFISQLNPDAGTVAAGFPLEVDLAPVAEGQV 63
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
+ WRG+P+FI HRT KEI++ Q + +RDPQ DS+RVK WLV+ ICTHLGC
Sbjct: 64 IKVFWRGQPIFINHRTPKEIESAQTADWRSMRDPQPDSERVKPGKEQWLVVSAICTHLGC 123
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
+P + G++ G++C CHGS YD+SGRIR GPAP N+ + PY+F GD I+I
Sbjct: 124 IPTEHQGNYDGWFCQCHGSQYDSSGRIRLGPAPLNLALVPYKFDGDAKIVI 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 277
E+ R+ Y+ G + VG ++V FIS ++ A +A +EVDL + EGQ
Sbjct: 7 EQPNRRDVLYLATGALATVGTA---ALVWPFISQLNPDAGTVAAGFPLEVDLAPVAEGQV 63
Query: 278 VTFKWRGKPLFIRHR 292
+ WRG+P+FI HR
Sbjct: 64 IKVFWRGQPIFINHR 78
>gi|397505438|ref|XP_003823270.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Pan paniscus]
Length = 277
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 107/166 (64%), Gaps = 5/166 (3%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
RK ++Y+ +++ A +V F+ S+ ASADVLAM I+ L+ IPE +++ FK
Sbjct: 112 RKGYSYLSTATATIT--YGANNVFPXFVPSVRASADVLAMXKIKFKLSDIPEDKNMAFKD 169
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL---VIIGICTHLGCVPIA 146
RGK LF+ HRT+KE D E S LRDPQ D ++VK P +L ++I +C LG V A
Sbjct: 170 RGKLLFVGHRTKKETDXEAAVERSHLRDPQHDLEQVKKPHFLYAVILISVCIRLGYVLTA 229
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
AG G YYCPCHGSHYDA GRIRKG AP N+EVP Y+F I+I
Sbjct: 230 FAGHSGSYYCPCHGSHYDAFGRIRKGLAPPNLEVPSYEFTSVDIVI 275
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
RK ++Y+ +++ A +V F+ S+ ASADVLAM I+ L+ IPE +++ FK
Sbjct: 112 RKGYSYLSTATATIT--YGANNVFPXFVPSVRASADVLAMXKIKFKLSDIPEDKNMAFKD 169
Query: 283 RGKPLFIRHR 292
RGK LF+ HR
Sbjct: 170 RGKLLFVGHR 179
>gi|407973864|ref|ZP_11154775.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor indicus C115]
gi|407430924|gb|EKF43597.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor indicus C115]
Length = 187
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 103/151 (68%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+RT+KEI+ ++ +++L
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNRTEKEIEEARSVPMAEL 93
Query: 116 RDPQA------------DSDRVK---DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D DR +WLV++G+CTHLGCVP+ AGD+GG++CPCHG
Sbjct: 94 KDPVARNENLPADAQATDIDRSAGEGKENWLVMLGVCTHLGCVPLGQAGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SHYD +GRIRKGPAP N+ VP + F + ++
Sbjct: 154 SHYDTAGRIRKGPAPQNLHVPTFAFTSDTVI 184
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+R
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNR 77
>gi|294678289|ref|YP_003578904.1| ubiquinol--cytochrome-c reductase iron-sulfur subunit [Rhodobacter
capsulatus SB 1003]
gi|338819721|sp|D5ANZ2.1|UCRI_RHOCB RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|71042457|pdb|1ZRT|E Chain E, Rhodobacter Capsulatus Cytochrome Bc1 Complex With
Stigmatellin Bound
gi|71042460|pdb|1ZRT|R Chain R, Rhodobacter Capsulatus Cytochrome Bc1 Complex With
Stigmatellin Bound
gi|581499|emb|CAA29116.1| unnamed protein product [Rhodobacter capsulatus SB 1003]
gi|294477109|gb|ADE86497.1| ubiquinol--cytochrome-c reductase, iron-sulfur subunit [Rhodobacter
capsulatus SB 1003]
Length = 191
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 22/178 (12%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y ++ G+V + V I+ M+ASADV AMA+I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------------DRVKDPSWL 131
RGKP+FIR R +K+I+ ++ + LRD A++ D WL
Sbjct: 68 RGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWL 127
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V++G+CTHLGCVP+ + +GD+GG++CPCHGSHYD++GRIRKGPAP N+++P F DE
Sbjct: 128 VMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDE 185
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y ++ G+V + V I+ M+ASADV AMA+I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 68 RGKPVFIRRR 77
>gi|334139731|ref|YP_004532925.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium sp. PP1Y]
gi|359399139|ref|ZP_09192146.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium pentaromativorans US6-1]
gi|333937749|emb|CCA91107.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium sp. PP1Y]
gi|357599533|gb|EHJ61244.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Novosphingobium pentaromativorans US6-1]
Length = 177
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 100/143 (69%), Gaps = 7/143 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+S MSASADVLA ++ EVD++ I GQ++ +R +P+F+R+ T KEI ++S L
Sbjct: 32 LVSQMSASADVLAASSTEVDISAIQPGQAIKAIFRKQPVFVRNLTPKEIKEANAVDVSTL 91
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGR 168
RDPQ +R K+ +WL+ +G+CTHLGCVP+ N G++GGY+CPCHGS YD + R
Sbjct: 92 RDPQTLEERTKEGKENWLITMGVCTHLGCVPLGAGEGENRGEFGGYFCPCHGSSYDTAAR 151
Query: 169 IRKGPAPTNMEVPPYQFGDEGIL 191
IRKGPAP N+EVP Y+F + ++
Sbjct: 152 IRKGPAPKNLEVPEYEFTSDTVV 174
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
+S MSASADVLA ++ EVD++ I GQ++ +R +P+F+R+
Sbjct: 32 LVSQMSASADVLAASSTEVDISAIQPGQAIKAIFRKQPVFVRN 74
>gi|395736786|ref|XP_003776805.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Pongo abelii]
Length = 250
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 107/166 (64%), Gaps = 5/166 (3%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
RK F+Y++ ++V A +V F+ S+ ASA+VLA+ I+ L+ IPEG+ + FK
Sbjct: 85 RKGFSYLLTATATVA--YGANNVFPXFVPSVRASAEVLAIXKIKFKLSDIPEGKYMAFKG 142
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL---VIIGICTHLGCVPIA 146
RGK LF+ HRT+KE D E S LRDPQ D +VK P +L ++I + LG V A
Sbjct: 143 RGKLLFVGHRTKKETDXEAAVERSHLRDPQHDLQQVKKPHFLYAVILISVYIRLGYVLTA 202
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
AGD G YYCP HGSHYDA GRIRKGPAP N+EVP Y+F I+I
Sbjct: 203 FAGDSGSYYCPHHGSHYDAFGRIRKGPAPPNLEVPSYEFTSVDIVI 248
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
RK F+Y++ ++V A +V F+ S+ ASA+VLA+ I+ L+ IPEG+ + FK
Sbjct: 85 RKGFSYLLTATATVA--YGANNVFPXFVPSVRASAEVLAIXKIKFKLSDIPEGKYMAFKG 142
Query: 283 RGKPLFIRHR 292
RGK LF+ HR
Sbjct: 143 RGKLLFVGHR 152
>gi|418940698|ref|ZP_13494052.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. PDO1-076]
gi|375052522|gb|EHS48935.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. PDO1-076]
Length = 213
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 117/201 (58%), Gaps = 19/201 (9%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
D + + + N E T+R F YM+ G + G V A +V FI M A
Sbjct: 14 DCEEDNLTVSEHETNAQHAAEPTRRD-FLYMVTG---MAGAVGAAAVAWPFIDQMRPDAS 69
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
LA+A+IEVD+ + G S+T KWRGKP+FIR+RT KE++ ++ L+DP A + V
Sbjct: 70 TLALASIEVDVAALEPGMSLTVKWRGKPVFIRNRTAKEVEEANQVALADLKDPIARNANV 129
Query: 126 K---------------DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIR 170
+W+V+IG CTHLGCVP+ AGD+GG++CPCHGSHYD +GRIR
Sbjct: 130 DAAADATDLARSAGEGKENWIVMIGSCTHLGCVPLGQAGDFGGWFCPCHGSHYDTAGRIR 189
Query: 171 KGPAPTNMEVPPYQFGDEGIL 191
KGPAP N+ +P + F + ++
Sbjct: 190 KGPAPMNLAIPTFGFVSDSVI 210
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
D + + + N E T+R F YM+ G + G V A +V FI M A
Sbjct: 14 DCEEDNLTVSEHETNAQHAAEPTRRD-FLYMVTG---MAGAVGAAAVAWPFIDQMRPDAS 69
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 70 TLALASIEVDVAALEPGMSLTVKWRGKPVFIRNR 103
>gi|338707309|ref|YP_004661510.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294113|gb|AEI37220.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 185
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 108/170 (63%), Gaps = 10/170 (5%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
K +R+ F + A G + VG +C +V I+ M+ S D++A A EVD+ + G
Sbjct: 10 KDMHPIRRRDFLNIAACGVTGVG-ICGAAV--PLIAQMNPSKDIVAQAKTEVDITAVQPG 66
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHL 140
Q++ WRG+P+FIRH T++EI ++S LRDP+ S R K +WLV + +CTHL
Sbjct: 67 QTLKVVWRGQPVFIRHLTKQEITEANAVSLSDLRDPETLSQRTKPGKSNWLVTMALCTHL 126
Query: 141 GCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
GC+P+ G++GGY+CPCHGS +D +GRIR+GPAPTN+ VPPY F
Sbjct: 127 GCIPLGGNVGEPRGEYGGYFCPCHGSAFDTAGRIRRGPAPTNLVVPPYAF 176
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
K +R+ F + A G + VG +C +V I+ M+ S D++A A EVD+ + G
Sbjct: 10 KDMHPIRRRDFLNIAACGVTGVG-ICGAAV--PLIAQMNPSKDIVAQAKTEVDITAVQPG 66
Query: 276 QSVTFKWRGKPLFIRH 291
Q++ WRG+P+FIRH
Sbjct: 67 QTLKVVWRGQPVFIRH 82
>gi|254470219|ref|ZP_05083623.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudovibrio
sp. JE062]
gi|374332790|ref|YP_005082974.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Pseudovibrio
sp. FO-BEG1]
gi|211960530|gb|EEA95726.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudovibrio
sp. JE062]
gi|359345578|gb|AEV38952.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Pseudovibrio
sp. FO-BEG1]
Length = 191
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 102/156 (65%), Gaps = 19/156 (12%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ A LA+A+IEVD++ + GQS+T WRGKP+FIR RT++EI +S L
Sbjct: 34 FIHQMNPDASALALASIEVDVSAVEVGQSITVTWRGKPVFIRQRTEQEIAEAAAVPLSDL 93
Query: 116 RDPQA------------DSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYC 156
D A D++R D +WLV++G+CTHLGCVP+ N G++GG++C
Sbjct: 94 PDQFARNSNLEDGADASDANRAADGKEAWLVMVGVCTHLGCVPLGQKNGDNKGEFGGWFC 153
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD +GRIRKGPAP NM VPPY+F + ++
Sbjct: 154 PCHGSHYDTAGRIRKGPAPENMLVPPYKFTTDDTVV 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ A LA+A+IEVD++ + GQS+T WRGKP+FIR R
Sbjct: 34 FIHQMNPDASALALASIEVDVSAVEVGQSITVTWRGKPVFIRQR 77
>gi|390451306|ref|ZP_10236882.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor aquibiodomus RA22]
gi|389661146|gb|EIM72775.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Nitratireductor aquibiodomus RA22]
Length = 187
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 101/151 (66%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+RT KEI+ + ++ L
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNRTDKEIEEARAVALADL 93
Query: 116 RDPQA------------DSDRVK---DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D DR +WLV+IG+CTHLGCVP+ AGD+GG++CPCHG
Sbjct: 94 KDPVARNANIAADAPATDIDRSAGEGKENWLVMIGVCTHLGCVPLGQAGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SHYD +GRIRKGPAP N+ VP ++F + ++
Sbjct: 154 SHYDTAGRIRKGPAPENLAVPTFEFVSDTVI 184
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A A+A+I+VD++ + G S+T KWRG+P+FIR+R
Sbjct: 34 FIDQMRPDASTRALASIQVDVSGVEPGMSLTVKWRGRPVFIRNR 77
>gi|167644669|ref|YP_001682332.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
sp. K31]
gi|167347099|gb|ABZ69834.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Caulobacter
sp. K31]
Length = 186
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ +AD A+A+IE DL + EGQ V KWRGKPLF+R+RT+ EI + + +
Sbjct: 46 FIDQMNPAADTRALASIEFDLGKVVEGQQVVVKWRGKPLFVRNRTKAEIAKAVADDSASM 105
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DP+ D+ RVK WL++ G CTHLGCVP G++GG++CPCHGS YD SGRIRKGP
Sbjct: 106 KDPEKDAARVKPGKSQWLIVGGNCTHLGCVPTFGGGEYGGWFCPCHGSVYDTSGRIRKGP 165
Query: 174 APTNMEVPPYQF 185
AP N+ VP Y F
Sbjct: 166 APKNLIVPDYAF 177
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ +AD A+A+IE DL + EGQ V KWRGKPLF+R+R
Sbjct: 46 FIDQMNPAADTRALASIEFDLGKVVEGQQVVVKWRGKPLFVRNR 89
>gi|149185359|ref|ZP_01863676.1| ubiquinol-cytochrome-c reductase [Erythrobacter sp. SD-21]
gi|148831470|gb|EDL49904.1| ubiquinol-cytochrome-c reductase [Erythrobacter sp. SD-21]
Length = 190
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 111/170 (65%), Gaps = 10/170 (5%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ F + A ++ +G + +VV +S M+ S DVLA ++ EVD++ I GQ++
Sbjct: 21 RRRDFLDIAAVSAAGIGGL---AVVYPLVSQMAPSKDVLAASSTEVDISAIEPGQAIKAV 77
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIA 146
+R +PLF++ T EI T LRDPQ+ +DR K+ LV +G+CTHLGCVP+
Sbjct: 78 FRKQPLFVKRLTPAEIQAANATATGSLRDPQSLADRTKEGHEDILVTMGVCTHLGCVPLG 137
Query: 147 NA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
A G++GGY+CPCHGSHYD +GRIRKGPAPTN+EVP Y+F + ++
Sbjct: 138 AAEGEVKGEFGGYFCPCHGSHYDTAGRIRKGPAPTNLEVPEYEFTSDTVI 187
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ F + A ++ +G + +VV +S M+ S DVLA ++ EVD++ I GQ++
Sbjct: 21 RRRDFLDIAAVSAAGIGGL---AVVYPLVSQMAPSKDVLAASSTEVDISAIEPGQAIKAV 77
Query: 282 WRGKPLFIR 290
+R +PLF++
Sbjct: 78 FRKQPLFVK 86
>gi|338819720|sp|P0CY48.1|UCRI_RHOCA RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|581491|emb|CAA27194.1| unnamed protein product [Rhodobacter sphaeroides]
Length = 191
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 22/178 (12%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y ++ G+V + V I+ M+ASADV AM++I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMSSIFVDVSAVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------------DRVKDPSWL 131
RGKP+FIR R +K+I+ ++ + LRD A++ D WL
Sbjct: 68 RGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRSLAAFDGTNTGEWL 127
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V++G+CTHLGCVP+ + +GD+GG++CPCHGSHYD++GRIRKGPAP N+++P F DE
Sbjct: 128 VMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDE 185
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y ++ G+V + V I+ M+ASADV AM++I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMSSIFVDVSAVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 68 RGKPVFIRRR 77
>gi|260574325|ref|ZP_05842329.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sp. SW2]
gi|259023221|gb|EEW26513.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sp. SW2]
Length = 153
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 104/147 (70%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+++I VD++ + G +T KWRGKP+FIR R Q++ID ++ ++ L
Sbjct: 1 MINQMNPSADVTALSSIFVDVSAVEVGTQLTVKWRGKPVFIRRRNQEDIDLGRSIPLTDL 60
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
RD A D++R D + WLV++G+CTHLGCVP+ ++GD+GG++CPCHGS
Sbjct: 61 RDTNAENANLDPGATAEDANRTLDEAGEWLVMMGVCTHLGCVPLGDSGDFGGWFCPCHGS 120
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD++GRIRKGPAP N+++P F DE
Sbjct: 121 HYDSAGRIRKGPAPRNLDIPVAAFFDE 147
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+++I VD++ + G +T KWRGKP+FIR R
Sbjct: 1 MINQMNPSADVTALSSIFVDVSAVEVGTQLTVKWRGKPVFIRRR 44
>gi|91978663|ref|YP_571322.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB5]
gi|91685119|gb|ABE41421.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB5]
Length = 177
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQS 84
E+ R+ Y+ G + VG +VV F+S ++ +A V A +EVDL + EGQ
Sbjct: 7 EQPSRRDVLYLATGALAAVGTA---AVVWPFVSQLNPDAATVAAGFPLEVDLAPLAEGQV 63
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
+ WRG+P+FI HRT KE+++ Q + +RDPQ DS RVK WLV+ ICTHLGC
Sbjct: 64 IKVFWRGQPIFINHRTPKEVESAQTADWKSMRDPQPDSARVKPGHEQWLVVSAICTHLGC 123
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
+P + G++ G++C CHGS YD+SGRIR GPAP N+ + PY+F D+ ILI
Sbjct: 124 IPTEHQGNYDGWFCQCHGSQYDSSGRIRLGPAPLNLALVPYKFTADDKILI 174
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQS 277
E+ R+ Y+ G + VG +VV F+S ++ +A V A +EVDL + EGQ
Sbjct: 7 EQPSRRDVLYLATGALAAVGTA---AVVWPFVSQLNPDAATVAAGFPLEVDLAPLAEGQV 63
Query: 278 VTFKWRGKPLFIRHR 292
+ WRG+P+FI HR
Sbjct: 64 IKVFWRGQPIFINHR 78
>gi|395793127|ref|ZP_10472532.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
vinsonii subsp. arupensis Pm136co]
gi|423713664|ref|ZP_17687924.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395422135|gb|EJF88351.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
vinsonii subsp. arupensis OK-94-513]
gi|395431441|gb|EJF97459.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
vinsonii subsp. arupensis Pm136co]
Length = 182
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ G + VG+ +V FI +S VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTGLTGAVGL---GAVAWPFIRQLSPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
KWRG+P+ IR+RT KEI + T +S LRD QA + ++ +WL
Sbjct: 60 VKWRGQPVVIRNRTAKEIAEARATELSILRDRQARNPNLESEEDATDFARSAGKGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+II +CTHLGCV + +G +GG+ CPCHGS YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 120 IIINLCTHLGCVTLGQSGKFGGWLCPCHGSVYDTAGRVRSGPANRNLAIPPYQFLSDTLL 179
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ G + VG+ +V FI +S VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTGLTGAVGL---GAVAWPFIRQLSPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ IR+R
Sbjct: 60 VKWRGQPVVIRNR 72
>gi|114769931|ref|ZP_01447541.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium HTCC2255]
gi|114549636|gb|EAU52518.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [alpha
proteobacterium HTCC2255]
Length = 188
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 111/182 (60%), Gaps = 22/182 (12%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+++ R+ F Y+ G+ G V + V I+ M+ SADV A+++IEVD++ + G
Sbjct: 3 EDKGNRRDFLYVATAGT---GAVIGGAAVWPMINQMNPSADVQALSSIEVDVSDVEPGTQ 59
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------------DSDRVKD 127
+T KW GKP+FIR RT EI + ++ L D A DS+R D
Sbjct: 60 ITVKWLGKPVFIRRRTSDEIKAARAVPLADLPDVDARNANASPVVGETETYAEDSNRSLD 119
Query: 128 PS--WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+ WLV++G+CTHLGCVP+ +AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP F
Sbjct: 120 ETGEWLVMMGVCTHLGCVPLGDAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLPVPVATF 179
Query: 186 GD 187
D
Sbjct: 180 ID 181
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+++ R+ F Y+ G+ G V + V I+ M+ SADV A+++IEVD++ + G
Sbjct: 3 EDKGNRRDFLYVATAGT---GAVIGGAAVWPMINQMNPSADVQALSSIEVDVSDVEPGTQ 59
Query: 278 VTFKWRGKPLFIRHR 292
+T KW GKP+FIR R
Sbjct: 60 ITVKWLGKPVFIRRR 74
>gi|406923692|gb|EKD60729.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [uncultured
bacterium]
Length = 185
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 108/171 (63%), Gaps = 16/171 (9%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G+ G+V + V ++ M+ SAD A+A+I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGA---GVVATGAAVWPLVNQMNPSADTRALASIFVDISGVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDP-----------QADSDRVKDPS--WLVIIGI 136
RGKP+FIR R+ EI ++T ++ L D AD++R D + WLV++G+
Sbjct: 68 RGKPVFIRRRSADEIKAARDTALTDLPDAGGENENKPGADAADANRTLDEAGEWLVMMGV 127
Query: 137 CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
CTHLGCVP+ +GD+GG++CPCHGSHYD SGRIRKGPAP N+ VP F D
Sbjct: 128 CTHLGCVPLGTSGDFGGWFCPCHGSHYDTSGRIRKGPAPRNLPVPVAAFID 178
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G+ G+V + V ++ M+ SAD A+A+I VD++ + G +T KW
Sbjct: 11 RRDFLYYATAGA---GVVATGAAVWPLVNQMNPSADTRALASIFVDISGVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 68 RGKPVFIRRR 77
>gi|427429430|ref|ZP_18919460.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit
[Caenispirillum salinarum AK4]
gi|425880159|gb|EKV28858.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit
[Caenispirillum salinarum AK4]
Length = 184
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 110/174 (63%), Gaps = 10/174 (5%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
++ R+ F G +VVG A + FI S++ +ADVLA+++ E+DL + GQ V
Sbjct: 13 DDPGRRDFLLYGTGAVAVVGTGLA---LWPFIDSINPTADVLALSSTELDLTPVAVGQRV 69
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNIS-QLRDPQADSDRVKDPSWLVIIGICTHLGCVP 144
T WRGKP+F+ HRT++EI + +L +P D+ RV++ WLV++GIC HLGCVP
Sbjct: 70 TVTWRGKPVFVSHRTEEEIQLAVAADDDPKLINPATDASRVQNADWLVVVGICKHLGCVP 129
Query: 145 IANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
+ G +GG++CPCHGS YD SGR+R GPAP N+ +PPY DE ++I
Sbjct: 130 LGQKSSDSRGRYGGWFCPCHGSQYDTSGRVRHGPAPLNLALPPYTLKADETVVI 183
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
++ R+ F G +VVG A + FI S++ +ADVLA+++ E+DL + GQ V
Sbjct: 13 DDPGRRDFLLYGTGAVAVVGTGLA---LWPFIDSINPTADVLALSSTELDLTPVAVGQRV 69
Query: 279 TFKWRGKPLFIRHR 292
T WRGKP+F+ HR
Sbjct: 70 TVTWRGKPVFVSHR 83
>gi|332188857|ref|ZP_08390565.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
sp. S17]
gi|332011123|gb|EGI53220.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
sp. S17]
Length = 197
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 112/175 (64%), Gaps = 13/175 (7%)
Query: 21 PDKGQEET---QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 77
P+ QEE +R+ F + A + VG A ++V I+ M+ SADVLA +T E+DL+
Sbjct: 14 PEPFQEEVHDPRRRDFINIAAVSFAGVG---ALAIVLPLINQMNPSADVLAQSTTEIDLS 70
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIG 135
I GQ++ +R +PLF+R+ T KEI +S+LRDPQ ++R K +WL+ +G
Sbjct: 71 KIAPGQAIKASFRKQPLFVRNLTPKEIAEADAVPLSELRDPQTLAERTKPGKKNWLITLG 130
Query: 136 ICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+CTHLGCVP+ N G +GGY+CPCHGS YD + RIRKGPAP N+ VP Y+F
Sbjct: 131 VCTHLGCVPLGAGEGENKGPYGGYFCPCHGSAYDTAARIRKGPAPLNLFVPDYKF 185
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 214 PDKGQEET---QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 270
P+ QEE +R+ F + A + VG A ++V I+ M+ SADVLA +T E+DL+
Sbjct: 14 PEPFQEEVHDPRRRDFINIAAVSFAGVG---ALAIVLPLINQMNPSADVLAQSTTEIDLS 70
Query: 271 LIPEGQSVTFKWRGKPLFIRH 291
I GQ++ +R +PLF+R+
Sbjct: 71 KIAPGQAIKASFRKQPLFVRN 91
>gi|88608022|ref|YP_506503.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Neorickettsia sennetsu str. Miyayama]
gi|88600191|gb|ABD45659.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Neorickettsia sennetsu str. Miyayama]
Length = 173
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 100/139 (71%), Gaps = 4/139 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ S SADVLA AT EVD++ + GQ V W+GKP++IR+RT++EI +N +++ L
Sbjct: 29 LLKSFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNRTEEEIRMARNADLTSL 88
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
+DP+ D+ RVK +WLV++G+CTHLGCVP++N G ++CPCHGSHYD SGR+ GP
Sbjct: 89 KDPERDAARVKPNKENWLVVVGVCTHLGCVPLSNTD--GTFFCPCHGSHYDTSGRVVSGP 146
Query: 174 APTNMEVPPYQFGDEGILI 192
APTN+ VP Y F ++ ++
Sbjct: 147 APTNLVVPDYYFINDTTVV 165
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ S SADVLA AT EVD++ + GQ V W+GKP++IR+R
Sbjct: 29 LLKSFGPSADVLATATREVDISNVKPGQGVKVLWQGKPVYIRNR 72
>gi|153008953|ref|YP_001370168.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
anthropi ATCC 49188]
gi|404318675|ref|ZP_10966608.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
anthropi CTS-325]
gi|151560841|gb|ABS14339.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
anthropi ATCC 49188]
Length = 187
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 110/180 (61%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-DSDRVKDP--------------SWL 131
KWRGKP+FIR+R+ KEI+ + T + L+D A +++ D +WL
Sbjct: 65 VKWRGKPVFIRNRSAKEIEDAKTTALGDLKDQNARNANLAADAQATDVARSAGEGKENWL 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD +GRIR GPAP NM +P Y F + ++
Sbjct: 125 VMIGVCTHLGCVPLGESGSFGGWFCPCHGSTYDTAGRIRSGPAPENMHIPQYAFASDTVI 184
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G+V + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATG---MAGVVGVGGLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPVFIRNR 77
>gi|84514979|ref|ZP_01002342.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Loktanella
vestfoldensis SKA53]
gi|84511138|gb|EAQ07592.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Loktanella
vestfoldensis SKA53]
Length = 199
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 17/178 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ + R+ F Y G+ G+V + V ++ M+ SADVLA+A+I VD++ + G
Sbjct: 19 EHQGTRRDFLYYATAGA---GVVVTGAAVWPLVNQMNPSADVLALASIRVDISAVDPGTQ 75
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQL---------RDPQADSDRV-----KDPSW 130
+T W+GKP+FIR RT++EI ++S L DP AD+ +D W
Sbjct: 76 LTVLWQGKPVFIRARTEEEIAEANAVDLSTLPDGLSQNANLDPAADASDANRALSEDGVW 135
Query: 131 LVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
LV +G+CTHLGCVP+ GD+GG++CPCHGSHYD +GRIR+GPAP N+++P F D+
Sbjct: 136 LVQMGVCTHLGCVPLGEQGDFGGWFCPCHGSHYDTAGRIRRGPAPRNLDIPVASFVDD 193
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ + R+ F Y G+ G+V + V ++ M+ SADVLA+A+I VD++ + G
Sbjct: 19 EHQGTRRDFLYYATAGA---GVVVTGAAVWPLVNQMNPSADVLALASIRVDISAVDPGTQ 75
Query: 278 VTFKWRGKPLFIRHR 292
+T W+GKP+FIR R
Sbjct: 76 LTVLWQGKPVFIRAR 90
>gi|149203467|ref|ZP_01880437.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. TM1035]
gi|149143300|gb|EDM31339.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. TM1035]
Length = 186
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 113/178 (63%), Gaps = 18/178 (10%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
E T+R Y AG VG V A + + I+ M+ SADV A+++I VD++ + G
Sbjct: 7 HEGTRRDFLYYATAG----VGAVTAGAAIWPLINQMNPSADVQALSSIRVDVSGVEPGTQ 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDPS--WL 131
++ K+ GKP+FIR RT+KEI+ + +++L D A D +R D + WL
Sbjct: 63 ISVKFLGKPVFIRRRTEKEIEAARAVELAELPDQNAQNRNDLALDASDQNRTLDEAGEWL 122
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V+IG+CTHLGCVPI + +GD+GG++CPCHGSHYD +GRIRKGPAP N+ +P F DE
Sbjct: 123 VMIGVCTHLGCVPIGDGSGDFGGWFCPCHGSHYDTAGRIRKGPAPENLWIPVATFLDE 180
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
E T+R Y AG VG V A + + I+ M+ SADV A+++I VD++ + G
Sbjct: 7 HEGTRRDFLYYATAG----VGAVTAGAAIWPLINQMNPSADVQALSSIRVDVSGVEPGTQ 62
Query: 278 VTFKWRGKPLFIRHR 292
++ K+ GKP+FIR R
Sbjct: 63 ISVKFLGKPVFIRRR 77
>gi|110634515|ref|YP_674723.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Chelativorans sp. BNC1]
gi|110285499|gb|ABG63558.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Chelativorans sp. BNC1]
Length = 190
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 110/174 (63%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G V A +V FI M A LA+A+I+VD++ + G S+T
Sbjct: 11 EHSRRDFLYVATG---MAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAVQPGMSLT 67
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRG P+FIR+RT++EI Q T + QL+DP A +D + +WL
Sbjct: 68 VKWRGHPVFIRNRTEQEIAAAQETPLDQLKDPVARNDNLPADTPATDLARSAGEGKENWL 127
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V+IG+CTHLGC+P+ +G++GG++CPCHGS YD +GR+R GPAP NM +P +QF
Sbjct: 128 VMIGVCTHLGCIPLGQSGEYGGWFCPCHGSVYDTAGRVRGGPAPENMAIPAFQF 181
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G V A +V FI M A LA+A+I+VD++ + G S+T
Sbjct: 11 EHSRRDFLYVATG---MAGAVGAAAVAWPFIDQMRPDASTLALASIQVDVSAVQPGMSLT 67
Query: 280 FKWRGKPLFIRHR 292
KWRG P+FIR+R
Sbjct: 68 VKWRGHPVFIRNR 80
>gi|329890250|ref|ZP_08268593.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta ATCC 11568]
gi|328845551|gb|EGF95115.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta ATCC 11568]
Length = 187
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 97/132 (73%), Gaps = 3/132 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+RT E+ T+ +
Sbjct: 48 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYRTPAEL-TKVIDEGAVG 106
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
PQ D++R K+ +LV+IG CTHLGCVP NAG++GG++CPCHGSHYDASGRIRKGP
Sbjct: 107 SPPQTDAERTKEGHEKYLVVIGSCTHLGCVPTFNAGEYGGWFCPCHGSHYDASGRIRKGP 166
Query: 174 APTNMEVPPYQF 185
AP N+ VP Y++
Sbjct: 167 APLNLIVPNYEY 178
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+R
Sbjct: 48 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYR 91
>gi|148240950|ref|YP_001220451.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146411326|gb|ABQ39779.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
Length = 175
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 93/133 (69%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAMAT-IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
IS M+ A +A A IEVDL I EGQ + WRGKP+F+RHRT +EI + +
Sbjct: 34 LISQMNPDASTIAAAAPIEVDLAPITEGQIIQVFWRGKPVFVRHRTTREIKAARAVDWRT 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+D++RV D WLV+IGICTHLGC+P+ + G + G++CPCHGS YD SGR+R+G
Sbjct: 94 LPDPQSDAERVNDGHDQWLVVIGICTHLGCIPLGHQGQYDGWFCPCHGSVYDTSGRVRRG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ +PPY F
Sbjct: 154 PAPANLYLPPYAF 166
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAMAT-IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IS M+ A +A A IEVDL I EGQ + WRGKP+F+RHR
Sbjct: 34 LISQMNPDASTIAAAAPIEVDLAPITEGQIIQVFWRGKPVFVRHR 78
>gi|110677947|ref|YP_680954.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
denitrificans OCh 114]
gi|109454063|gb|ABG30268.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
denitrificans OCh 114]
Length = 186
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 103/147 (70%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ +ADVLA+++I VD++ + G +T KW GKP+F+R RTQ+EID + +++ L
Sbjct: 34 LVNQMNPTADVLALSSIRVDVSGLEPGTQLTVKWLGKPVFVRRRTQEEIDAARAVDLADL 93
Query: 116 RD---------PQADS---DRVKDPS--WLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
D P AD+ +R D S WLV++G+CTH GCVP+ +AGD+GG++CPCHGS
Sbjct: 94 PDQLAENANIAPDADASDENRSLDESGEWLVMMGVCTHFGCVPLGDAGDYGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD SGRIRKGPAPTN+ VP F D+
Sbjct: 154 HYDTSGRIRKGPAPTNLPVPTAVFVDD 180
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ +ADVLA+++I VD++ + G +T KW GKP+F+R R
Sbjct: 34 LVNQMNPTADVLALSSIRVDVSGLEPGTQLTVKWLGKPVFVRRR 77
>gi|339503637|ref|YP_004691057.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
gi|338757630|gb|AEI94094.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
Length = 190
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 101/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADVLA++T+ VD++ + G +T KW+GKP+FIR RT++EI + T+++ L
Sbjct: 34 LVNQMNPSADVLALSTVRVDVSGVQPGTQLTLKWQGKPVFIRARTEEEIAQARATDLTDL 93
Query: 116 RDP------------QADSDRV--KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
D AD +R +D WLV +GICTHLGCVP+ AGD+GG++CPCHGS
Sbjct: 94 PDQLAQNANLAGDADAADENRALSEDGVWLVQMGICTHLGCVPLGEAGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+++P F DE
Sbjct: 154 HYDVAGRIRKGPAPRNLDIPVASFVDE 180
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADVLA++T+ VD++ + G +T KW+GKP+FIR R
Sbjct: 34 LVNQMNPSADVLALSTVRVDVSGVQPGTQLTLKWQGKPVFIRAR 77
>gi|402850681|ref|ZP_10898872.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
gi|402499042|gb|EJW10763.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
Length = 181
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 87/119 (73%), Gaps = 2/119 (1%)
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPS 129
IEV+L I EGQ V+ WRGKP+F+RHRT EI E+ T ++ L DPQ+D+DRVK
Sbjct: 51 IEVNLAPISEGQIVSLFWRGKPIFVRHRTAAEIAKEEATPLAALMDPQSDADRVKAGHAQ 110
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
WLV+ CTHLGC+P+ + G+W G++CPCHGS YDASGR+R GPA N+ VPPY F D+
Sbjct: 111 WLVVYASCTHLGCIPLGHQGEWDGWFCPCHGSQYDASGRVRHGPAALNLPVPPYAFVDD 169
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
IEV+L I EGQ V+ WRGKP+F+RHR
Sbjct: 51 IEVNLAPISEGQIVSLFWRGKPIFVRHR 78
>gi|68171639|ref|ZP_00545004.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
chaffeensis str. Sapulpa]
gi|88658045|ref|YP_507335.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
chaffeensis str. Arkansas]
gi|67998932|gb|EAM85618.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599502|gb|ABD44971.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
chaffeensis str. Arkansas]
Length = 187
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ + +R+ F + + +G+ S V I +S SA+V+A +T+EV+L+ I EG++
Sbjct: 12 KTKVKRRDFLGLTTLSMAGIGLF---SSVYPLIKFLSPSAEVIAQSTVEVNLSDIKEGKT 68
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGC 142
KW+GKP+FIR RT +EI+ + I LRDPQ+D +R WL+++GICTHLGC
Sbjct: 69 KVIKWQGKPVFIRKRTTQEIEEARAVKIDSLRDPQSDQERTHQGREEWLIMVGICTHLGC 128
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDI 200
VP+ G+YCPCHGS YD SGRI GPAP N+ VP Y F + +++ + +D+
Sbjct: 129 VPVEVDDGKKGWYCPCHGSKYDTSGRIISGPAPLNLPVPDYYFSQKDVIVIGVKGTDV 186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ + +R+ F + + +G+ S V I +S SA+V+A +T+EV+L+ I EG++
Sbjct: 12 KTKVKRRDFLGLTTLSMAGIGLF---SSVYPLIKFLSPSAEVIAQSTVEVNLSDIKEGKT 68
Query: 278 VTFKWRGKPLFIRHR 292
KW+GKP+FIR R
Sbjct: 69 KVIKWQGKPVFIRKR 83
>gi|399060929|ref|ZP_10745848.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium sp. AP12]
gi|398036872|gb|EJL30080.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Novosphingobium sp. AP12]
Length = 177
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 102/147 (69%), Gaps = 7/147 (4%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
+V IS MSASADVLA ++ E+D++ I GQ++ +R +P+F+R+ T KEI+ +
Sbjct: 28 IVIPLISQMSASADVLAASSTEIDISAIQPGQAIKAIFRKQPVFVRNLTPKEIEEADAVD 87
Query: 112 ISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYD 164
+ LRDPQ ++R K+ +WL+ +G+CTHLGCVP+ G++GGY+CPCHGS YD
Sbjct: 88 TASLRDPQTLAERTKEGKENWLITMGVCTHLGCVPLGAGEGEIKGEFGGYFCPCHGSSYD 147
Query: 165 ASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+ RIRKGPAP N+EVP Y+F + ++
Sbjct: 148 TAARIRKGPAPKNLEVPEYEFTSDTVV 174
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
+V IS MSASADVLA ++ E+D++ I GQ++ +R +P+F+R+
Sbjct: 28 IVIPLISQMSASADVLAASSTEIDISAIQPGQAIKAIFRKQPVFVRN 74
>gi|322787534|gb|EFZ13622.1| hypothetical protein SINV_16003 [Solenopsis invicta]
Length = 99
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 80/98 (81%)
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGY 154
+ +R EI E +++ LRDP+ DS RVKDP WLV++G+CTHLGCVPIANAGD+GGY
Sbjct: 1 MVIYRMASEIAAEAKVDVASLRDPEEDSVRVKDPKWLVVLGVCTHLGCVPIANAGDFGGY 60
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
YCPCHGSHYDASGRIRKGPAP N+EVPPY+F + +++
Sbjct: 61 YCPCHGSHYDASGRIRKGPAPLNLEVPPYEFIENVLVV 98
>gi|402824759|ref|ZP_10874098.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
sp. LH128]
gi|402261690|gb|EJU11714.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
sp. LH128]
Length = 177
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 101/147 (68%), Gaps = 7/147 (4%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
+V +S MSASADVLA ++ E+D++ I GQ++ +R +P+F+R+ T EI+ +
Sbjct: 28 IVVPLVSQMSASADVLAASSTEIDISAIQPGQAIKAVFRKQPVFVRNLTPHEIEAANKVD 87
Query: 112 ISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYD 164
++ LRDPQ +R K+ +WL+ +G+CTHLGCVP+ G++GGY+CPCHGS YD
Sbjct: 88 VASLRDPQTLEERTKEGKENWLITMGVCTHLGCVPLGAGEGEVKGEFGGYFCPCHGSAYD 147
Query: 165 ASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+ RIRKGPAP N+EVP Y+F + ++
Sbjct: 148 TAARIRKGPAPKNLEVPKYEFSSDTVV 174
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
+V +S MSASADVLA ++ E+D++ I GQ++ +R +P+F+R+
Sbjct: 28 IVVPLVSQMSASADVLAASSTEIDISAIQPGQAIKAVFRKQPVFVRN 74
>gi|341613887|ref|ZP_08700756.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Citromicrobium sp. JLT1363]
Length = 201
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 109/171 (63%), Gaps = 10/171 (5%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ F + A ++ VG +V+ IS M+ SADVLA +T EVD++ I GQ++
Sbjct: 31 RRRDFINIAALSAAGVG---GAAVLYPLISQMAPSADVLAESTTEVDVSAIQPGQAIKAV 87
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP--SWLVIIGICTHLGCVPIA 146
+R +PLF+R T E++ +S LRDPQ ++R KD LV +G+CTHLGCVP+
Sbjct: 88 FRKQPLFVRRLTPAEMEAADAVPLSALRDPQTLAERTKDGHHDLLVTMGVCTHLGCVPLG 147
Query: 147 -----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
N G++GGY+CPCHGS +D + RIRKGPAPTN+EVP Y F +G I
Sbjct: 148 AAEGENKGEFGGYFCPCHGSQFDTAARIRKGPAPTNLEVPEYVFSPDGSTI 198
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ F + A ++ VG +V+ IS M+ SADVLA +T EVD++ I GQ++
Sbjct: 31 RRRDFINIAALSAAGVG---GAAVLYPLISQMAPSADVLAESTTEVDVSAIQPGQAIKAV 87
Query: 282 WRGKPLFIR 290
+R +PLF+R
Sbjct: 88 FRKQPLFVR 96
>gi|300024034|ref|YP_003756645.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525855|gb|ADJ24324.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Hyphomicrobium denitrificans ATCC 51888]
Length = 190
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 22/178 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F + + VG A S++ FI M+ A A+++++VDL+ + EGQ++T
Sbjct: 7 EPNRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTKALSSVDVDLSPVKEGQAIT 63
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQL------------RDPQADSDRV--KDPSWLV 132
WRGKP+FIR+RT+ E++ N ++ L DP D++R +W+V
Sbjct: 64 VLWRGKPIFIRNRTKTEVEAAVNVDVKTLPDSLARNEALPADDPATDANRTVKGHENWIV 123
Query: 133 IIGICTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
++GICTHLGC+P A G++GG++CPCHGS YD SGRIRKGPAP N++VPPY F
Sbjct: 124 LVGICTHLGCIPKGQAMGDERGEYGGWFCPCHGSVYDTSGRIRKGPAPRNLDVPPYTF 181
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F + + VG A S++ FI M+ A A+++++VDL+ + EGQ++T
Sbjct: 7 EPNRRDFLVVAGNAFAAVG---AASLLWPFIQQMNPDASTKALSSVDVDLSPVKEGQAIT 63
Query: 280 FKWRGKPLFIRHR 292
WRGKP+FIR+R
Sbjct: 64 VLWRGKPIFIRNR 76
>gi|407784755|ref|ZP_11131904.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Celeribacter
baekdonensis B30]
gi|407204457|gb|EKE74438.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Celeribacter
baekdonensis B30]
Length = 187
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 105/153 (68%), Gaps = 16/153 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G +T KWRGKP+FIR RTQ EID + +S L
Sbjct: 34 LVNQMNPSADVQALSSIRVDISGVEVGTQLTVKWRGKPVFIRRRTQDEIDMGRAVELSDL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
DP+A D +R D + WLV++G+CTHLGCVP+ + AGD+GG++CPCHG
Sbjct: 94 VDPKAENANIAADATAIDENRTLDEAGEWLVMMGVCTHLGCVPLGDGAGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
SHYD +GRIRKGPAP N+++P F GD I++
Sbjct: 154 SHYDTAGRIRKGPAPRNLDIPVAAFDGDTEIVL 186
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G +T KWRGKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSIRVDISGVEVGTQLTVKWRGKPVFIRRR 77
>gi|241851071|ref|XP_002415747.1| ubiquinol cytochrome C reductase, subunit RIP1, putative [Ixodes
scapularis]
gi|215509961|gb|EEC19414.1| ubiquinol cytochrome C reductase, subunit RIP1, putative [Ixodes
scapularis]
Length = 229
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 97/139 (69%), Gaps = 4/139 (2%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQ----EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+AH+D++ PDFS YR D + ET RK +Y+I G ++ AKS+V QF+
Sbjct: 77 MAHTDLKVPDFSPYRHKLTSDPTKPARDTETPRKMHSYLILGAGALGTTYAAKSLVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
++SASADVLAMA IEV L IPEG++ TFKWRGKPLFIRHRT EI E + ++S LRD
Sbjct: 137 MALSASADVLAMAKIEVKLGDIPEGKNATFKWRGKPLFIRHRTPDEISREGSVDLSSLRD 196
Query: 118 PQADSDRVKDPSWLVIIGI 136
PQ D++R++ P WLV+IGI
Sbjct: 197 PQHDNERMQKPEWLVVIGI 215
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 189 GILIRMLAHSDIRTPDFSKYRRDRNPDKGQ----EETQRKAFTYMIAGGSSVVGMVCAKS 244
G+ IRM AH+D++ PDFS YR D + ET RK +Y+I G ++ AKS
Sbjct: 72 GVQIRM-AHTDLKVPDFSPYRHKLTSDPTKPARDTETPRKMHSYLILGAGALGTTYAAKS 130
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+V QF+ ++SASADVLAMA IEV L IPEG++ TFKWRGKPLFIRHR
Sbjct: 131 LVTQFVMALSASADVLAMAKIEVKLGDIPEGKNATFKWRGKPLFIRHR 178
>gi|149912562|ref|ZP_01901096.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. AzwK-3b]
gi|149812968|gb|EDM72794.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. AzwK-3b]
Length = 168
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 104/163 (63%), Gaps = 20/163 (12%)
Query: 49 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQ 108
A + + + M+ SADV A+++I+VD++ I EG +T KW GKP+FIR RT EI+ +
Sbjct: 3 AGAAIWPLVDQMNPSADVQALSSIQVDVSGIAEGSQITVKWLGKPVFIRRRTPAEIEDAR 62
Query: 109 NTNISQLRD------------PQADSDRVKDPS--WLVIIGICTHLGCVPIANAGDW--- 151
+ +++ L D P D +R D S WLV +G+CTHLGCVP+ NAGD+
Sbjct: 63 SVDVADLPDGIARNNNISGDVPATDENRAMDESGEWLVQMGVCTHLGCVPMGNAGDFALE 122
Query: 152 ---GGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
GG++CPCHGSHYD SGRIRKGPAP N+ VP +F DE +
Sbjct: 123 GGVGGWFCPCHGSHYDTSGRIRKGPAPENLPVPVAEFVDESTI 165
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 242 AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A + + + M+ SADV A+++I+VD++ I EG +T KW GKP+FIR R
Sbjct: 3 AGAAIWPLVDQMNPSADVQALSSIQVDVSGIAEGSQITVKWLGKPVFIRRR 53
>gi|73667130|ref|YP_303146.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
canis str. Jake]
gi|72394271|gb|AAZ68548.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ehrlichia
canis str. Jake]
Length = 187
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 112/178 (62%), Gaps = 5/178 (2%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ + +R+ F + + +G+ S V I +S SA+V+A +TIEV+L+ I EG++
Sbjct: 12 KTKVKRRDFLGLTTLSMAGIGLF---SSVYPLIKFLSPSAEVVAQSTIEVNLSDIKEGKT 68
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR--VKDPSWLVIIGICTHLGC 142
KW+GKP+FIR RT +EI+ ++ + L+DPQ+D +R V WLV++GICTHLGC
Sbjct: 69 KVVKWQGKPVFIRKRTTQEIEEARSVKMDSLKDPQSDQERTHVGREEWLVMVGICTHLGC 128
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDI 200
VP+ G+YCPCHGS YD SGRI GPAP N+ VP Y F + +++ +D+
Sbjct: 129 VPVEVDDGKKGWYCPCHGSKYDTSGRIVSGPAPLNLPVPDYYFSRKDVIVIGTKGTDV 186
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ + +R+ F + + +G+ S V I +S SA+V+A +TIEV+L+ I EG++
Sbjct: 12 KTKVKRRDFLGLTTLSMAGIGLF---SSVYPLIKFLSPSAEVVAQSTIEVNLSDIKEGKT 68
Query: 278 VTFKWRGKPLFIRHR 292
KW+GKP+FIR R
Sbjct: 69 KVVKWQGKPVFIRKR 83
>gi|395786711|ref|ZP_10466438.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
tamiae Th239]
gi|423716395|ref|ZP_17690585.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
tamiae Th307]
gi|395423009|gb|EJF89205.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
tamiae Th239]
gi|395429324|gb|EJF95392.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
tamiae Th307]
Length = 182
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 109/178 (61%), Gaps = 18/178 (10%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
R+ F ++ G + V+G+ ++ FI + +LA A++E+DL I EG SVT K
Sbjct: 5 NRRDFLFLATGTAGVIGV---GALAWPFIDQLRPDQSILASASVEIDLTGIEEGMSVTVK 61
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS---------------WLVI 133
WRG+P+ IR+RT+KE+D +N +I L+DP A + + + WL++
Sbjct: 62 WRGQPVVIRNRTKKEMDEARNFDIDGLKDPWARNPNLTPEAFATDEARSAGKGRENWLIM 121
Query: 134 IGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
I +CTHLGCVPI +G + G++CPCHGS YD +GR+R GPA N+ +PPY+F + +L
Sbjct: 122 INLCTHLGCVPIGQSGAYNGWFCPCHGSAYDTAGRVRNGPANQNLAIPPYKFLSDTLL 179
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
R+ F ++ G + V+G+ ++ FI + +LA A++E+DL I EG SVT K
Sbjct: 5 NRRDFLFLATGTAGVIGV---GALAWPFIDQLRPDQSILASASVEIDLTGIEEGMSVTVK 61
Query: 282 WRGKPLFIRHR 292
WRG+P+ IR+R
Sbjct: 62 WRGQPVVIRNR 72
>gi|333755413|gb|AEF97515.1| Rieske iron-sulfur protein [Drosophila ficusphila]
Length = 85
Score = 154 bits (390), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/80 (78%), Positives = 71/80 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPEADDQRVVKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+LI
Sbjct: 64 PAPLNLEVPTHEFPNEGLLI 83
>gi|429768236|ref|ZP_19300402.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta 470-4]
gi|429189378|gb|EKY30215.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Brevundimonas diminuta 470-4]
Length = 196
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+RT E+ T+ +
Sbjct: 57 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYRTPAEL-TKVIDEGAVG 115
Query: 116 RDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGP 173
P+ D++R K +LV+IG CTHLGCVP NAG++GG++CPCHGSHYDASGRIRKGP
Sbjct: 116 SPPETDAERTKAGHEKYLVVIGSCTHLGCVPTFNAGEYGGWFCPCHGSHYDASGRIRKGP 175
Query: 174 APTNMEVPPYQF 185
AP N+ VP Y++
Sbjct: 176 APLNLIVPNYEY 187
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ +AD LA+A+IE DL + EGQ V KW+GKP+F+R+R
Sbjct: 57 LINQMNPAADTLALASIEFDLTKVQEGQQVVIKWQGKPVFVRYR 100
>gi|83942139|ref|ZP_00954601.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83847959|gb|EAP85834.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 153
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 100/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ ++ SADV A+++I VD++ + G +T KW GKP+FIR RT++EI ++ +S+L
Sbjct: 1 MVNQLNPSADVKALSSIRVDVSAVEPGTQLTVKWLGKPVFIRRRTEEEIAKARDVEMSEL 60
Query: 116 RDPQADSDRVK--------------DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
DP A++ + WLV++G+CTHLGCVP+ +AGD+GG++CPCHGS
Sbjct: 61 PDPGAENANIAAGAPATDENRAMAGKEDWLVMMGVCTHLGCVPLGDAGDFGGWFCPCHGS 120
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+ VP +F DE
Sbjct: 121 HYDTAGRIRKGPAPRNLPVPIAEFVDE 147
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ ++ SADV A+++I VD++ + G +T KW GKP+FIR R
Sbjct: 1 MVNQLNPSADVKALSSIRVDVSAVEPGTQLTVKWLGKPVFIRRR 44
>gi|339505482|ref|YP_004692902.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
gi|338759475|gb|AEI95939.1| ubiquinol-cytochrome c reductase iron-sulfur subunit PetA
[Roseobacter litoralis Och 149]
Length = 186
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 102/147 (69%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ +ADVLA+++I VD++ I G +T KW GKP+F+R RTQ+EID + +++ L
Sbjct: 34 LVNQMNPTADVLALSSIRVDVSGIEPGTQLTVKWLGKPVFVRRRTQEEIDAARAVDLADL 93
Query: 116 RD---------PQADS---DRVKDPS--WLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
D P AD+ +R D S WLV++G+CTH GCVP+ +AGD+ G++CPCHGS
Sbjct: 94 PDQLAENANIAPDADASDENRSLDESGEWLVMMGVCTHFGCVPLGDAGDYDGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD SGRIRKGPAPTN+ VP F D+
Sbjct: 154 HYDTSGRIRKGPAPTNLPVPTAVFVDD 180
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ +ADVLA+++I VD++ I G +T KW GKP+F+R R
Sbjct: 34 LVNQMNPTADVLALSSIRVDVSGIEPGTQLTVKWLGKPVFVRRR 77
>gi|333755407|gb|AEF97512.1| Rieske iron-sulfur protein [Drosophila prostipennis]
gi|333755409|gb|AEF97513.1| Rieske iron-sulfur protein [Drosophila pseudotakahashii]
gi|333755411|gb|AEF97514.1| Rieske iron-sulfur protein [Drosophila lutescens]
Length = 85
Score = 154 bits (389), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/80 (78%), Positives = 71/80 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+LI
Sbjct: 64 PAPLNLEVPTHEFPNEGLLI 83
>gi|86751408|ref|YP_487904.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris HaA2]
gi|86574436|gb|ABD08993.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris HaA2]
Length = 177
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQSV 85
+ R+ ++ G + VG A + F+S ++ A +A +EVDL + EGQ +
Sbjct: 8 QPNRRDVLFLATGALATVGTAAA---IWPFVSQLNPDAATIAAGFPLEVDLAPLAEGQVI 64
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGCV 143
WRG+P+FI HRT KEI++ Q + +RDPQ DS+RVK WLV+ ICTHLGC+
Sbjct: 65 KVFWRGQPIFINHRTPKEIESAQTADWKSMRDPQPDSERVKAGHEQWLVVSAICTHLGCI 124
Query: 144 PIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
P + G++ G++C CHGS YD+SGRIR GPAP N+ + PY+F D+ +LI
Sbjct: 125 PTEHQGNYDGWFCQCHGSQYDSSGRIRLGPAPLNLALVPYKFTADDKVLI 174
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQSV 278
+ R+ ++ G + VG A + F+S ++ A +A +EVDL + EGQ +
Sbjct: 8 QPNRRDVLFLATGALATVGTAAA---IWPFVSQLNPDAATIAAGFPLEVDLAPLAEGQVI 64
Query: 279 TFKWRGKPLFIRHR 292
WRG+P+FI HR
Sbjct: 65 KVFWRGQPIFINHR 78
>gi|85375554|ref|YP_459616.1| ubiquinol-cytochrome-c reductase [Erythrobacter litoralis HTCC2594]
gi|84788637|gb|ABC64819.1| ubiquinol-cytochrome-c reductase [Erythrobacter litoralis HTCC2594]
Length = 192
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 110/170 (64%), Gaps = 10/170 (5%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
K ++ +R+ F + A ++ VG + +V +S M+ SADVLA +T +VD++ I G
Sbjct: 17 KQEDGVRRRDFINIAAVSAAGVGTI---GIVYPLVSQMAPSADVLADSTTDVDVSAIEPG 73
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHL 140
QS+ +R +PLF++ T EI T +S LRD ++ +DR + LV +G+CTHL
Sbjct: 74 QSIKAIFRKQPLFVKRLTPAEIAEANATPLSDLRDAESLADRTRPGHEDILVTMGVCTHL 133
Query: 141 GCVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
GCVP+ N G++ GY+CPCHGSHYD +GRIRKGPAPTN+EVP Y+F
Sbjct: 134 GCVPLGAAEGENKGEYDGYFCPCHGSHYDVAGRIRKGPAPTNLEVPEYEF 183
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
K ++ +R+ F + A ++ VG + +V +S M+ SADVLA +T +VD++ I G
Sbjct: 17 KQEDGVRRRDFINIAAVSAAGVGTI---GIVYPLVSQMAPSADVLADSTTDVDVSAIEPG 73
Query: 276 QSVTFKWRGKPLFIR 290
QS+ +R +PLF++
Sbjct: 74 QSIKAIFRKQPLFVK 88
>gi|136706|sp|P05417.1|UCRI_PARDE RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|354459472|pdb|2YIU|C Chain C, X-Ray Structure Of The Dimeric Cytochrome Bc1 Complex From
The Soil Bacterium Paracoccus Denitrificans At 2.7
Angstrom Resolution
gi|354459475|pdb|2YIU|F Chain F, X-Ray Structure Of The Dimeric Cytochrome Bc1 Complex From
The Soil Bacterium Paracoccus Denitrificans At 2.7
Angstrom Resolution
gi|294081|gb|AAA25571.1| cytochrome FeS subunit (gtg start codon; EC 1.10.2.2) [Paracoccus
denitrificans]
gi|581444|emb|CAA29243.1| unnamed protein product [Paracoccus denitrificans]
Length = 190
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR RT+ EI + ++ QL
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 97
Query: 116 RD-----------PQADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D P D +R D + WLV+IG+CTHLGCVPI + AGD+GG++CPCHGS
Sbjct: 98 IDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGS 157
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD SGRIR+GPAP N+ +P +F D+
Sbjct: 158 HYDTSGRIRRGPAPQNLHIPVAEFLDD 184
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR R
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRR 81
>gi|40063673|gb|AAR38462.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [uncultured
marine bacterium 582]
Length = 203
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 115/196 (58%), Gaps = 22/196 (11%)
Query: 7 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 66
+R PD N D+ R+ F Y GG VG V + + I+ M+ SADV
Sbjct: 10 VRIPDLPISSNIENRDE-----SRRDFLYYATGG---VGSVTVGAALWPLINQMNPSADV 61
Query: 67 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------ 120
A+++I VD++ + G +T KW GKP+F+R RT++EI + T S+L D A
Sbjct: 62 KALSSIRVDISDVEPGTQLTVKWLGKPVFVRRRTKEEIRAARVTEFSELIDKSARNDNKP 121
Query: 121 -----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKG 172
D +R D + WLV++G+CTHLGCVP+ AG++ G++CPCHGSHYD SGRIRKG
Sbjct: 122 ELDAADRNRTLDTNGEWLVMMGVCTHLGCVPLGGGAGEFNGWFCPCHGSHYDTSGRIRKG 181
Query: 173 PAPTNMEVPPYQFGDE 188
PAP N+ VP F D+
Sbjct: 182 PAPENLSVPVAVFLDK 197
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 200 IRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADV 259
+R PD N D+ R+ F Y GG VG V + + I+ M+ SADV
Sbjct: 10 VRIPDLPISSNIENRDE-----SRRDFLYYATGG---VGSVTVGAALWPLINQMNPSADV 61
Query: 260 LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A+++I VD++ + G +T KW GKP+F+R R
Sbjct: 62 KALSSIRVDISDVEPGTQLTVKWLGKPVFVRRR 94
>gi|395789667|ref|ZP_10469177.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
taylorii 8TBB]
gi|395428505|gb|EJF94581.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
taylorii 8TBB]
Length = 182
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ +SV G V +VV FI M VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLV---TSVTGAVGIGAVVWPFICQMRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
+WRG+P+ IR+RT KEI + + LRD QA + ++ +WL
Sbjct: 60 VRWRGQPVVIRNRTAKEIAESRAITLDILRDRQARNPNLEGEEEATDFARSAGEGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++I +CTHLGCV + +G +GG+ CPCHG+ YD +GR+R GPAP N+ +PPYQF + +L
Sbjct: 120 ILINLCTHLGCVTLGQSGKFGGWLCPCHGAVYDTAGRVRSGPAPYNLAIPPYQFLSDTLL 179
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ +SV G V +VV FI M VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLV---TSVTGAVGIGAVVWPFICQMRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
+WRG+P+ IR+R
Sbjct: 60 VRWRGQPVVIRNR 72
>gi|90422443|ref|YP_530813.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
gi|90104457|gb|ABD86494.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
Length = 175
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
++ M+ A +A A IEVDL I GQ + WRG+P++I +RT K+++ + +S
Sbjct: 34 LVAQMNPDASTIAAGAPIEVDLAPIAVGQDIKVFWRGQPIYIMNRTPKQVEEARAVQLSS 93
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP +D DR K+ WL+++GICTHLGC+PIA+ G + G++CPCHGS YD+SGRIR+G
Sbjct: 94 LPDPASDQDRTKEGHEQWLIVVGICTHLGCIPIAHEGKYDGFFCPCHGSQYDSSGRIRQG 153
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 154 PAPANLPVPPYQF 166
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ A +A A IEVDL I GQ + WRG+P++I +R
Sbjct: 34 LVAQMNPDASTIAAGAPIEVDLAPIAVGQDIKVFWRGQPIYIMNR 78
>gi|119385036|ref|YP_916092.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Paracoccus
denitrificans PD1222]
gi|119374803|gb|ABL70396.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Paracoccus
denitrificans PD1222]
Length = 195
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR RT+ EI + ++ QL
Sbjct: 43 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 102
Query: 116 RD-----------PQADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D P D +R D + WLV+IG+CTHLGCVPI + AGD+GG++CPCHGS
Sbjct: 103 IDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGS 162
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD SGRIR+GPAP N+ +P +F D+
Sbjct: 163 HYDTSGRIRRGPAPQNLHIPVAEFLDD 189
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR R
Sbjct: 43 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRR 86
>gi|340029584|ref|ZP_08665647.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Paracoccus
sp. TRP]
Length = 195
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 101/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR RT++EI+ + +++L
Sbjct: 43 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEEEIEAGRAVKLNEL 102
Query: 116 RD-----------PQADSDRVKDPS--WLVIIGICTHLGCVPIANA-GDWGGYYCPCHGS 161
D P D +R D + WLV+IG+CTHLGCVPI N GD+GG++CPCHGS
Sbjct: 103 IDQSAENPNKPGEPATDENRTLDEAGEWLVMIGVCTHLGCVPIGNGTGDFGGWFCPCHGS 162
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+ +P +F +E
Sbjct: 163 HYDTAGRIRKGPAPQNLHIPVAEFVNE 189
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 17/101 (16%)
Query: 192 IRMLAHSDIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
IR ++H+D D RRD Y AG +V A ++VNQ
Sbjct: 3 IRPVSHADEHAGDHGATRRD-------------FLYYATAGAGTVAAGAAAWTLVNQ--- 46
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ SADV A+A+I+VD++ + G +T KW GKP+FIR R
Sbjct: 47 -MNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRR 86
>gi|333755405|gb|AEF97511.1| Rieske iron-sulfur protein [Drosophila takahashii]
Length = 85
Score = 154 bits (388), Expect = 7e-35, Method: Composition-based stats.
Identities = 62/80 (77%), Positives = 71/80 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+L+
Sbjct: 64 PAPLNLEVPTHEFPNEGLLV 83
>gi|296284879|ref|ZP_06862877.1| ubiquinol-cytochrome-c reductase [Citromicrobium bathyomarinum
JL354]
Length = 196
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 10/171 (5%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
+ G+ +R+ F + A ++ VG +V+ IS M+ SADVLA +T EVD++ I
Sbjct: 20 ETGEGGVRRRDFINIAAVSAAGVG---GAAVLYPLISQMAPSADVLAESTTEVDVSAIEP 76
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP--SWLVIIGICTH 139
GQ++ +R +PLF+R T KEI +S LRDP+ +DR K+ LV +G+CTH
Sbjct: 77 GQAIKAVFRKQPLFVRRLTPKEIAEADAVPLSALRDPETLADRTKEGHLDMLVTMGVCTH 136
Query: 140 LGCVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+ N G++GGY+CPCHGS YD + RIRKGPAPTN+ VP Y F
Sbjct: 137 LGCVPLGAAEGENKGEFGGYFCPCHGSSYDTAARIRKGPAPTNLVVPDYVF 187
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
+ G+ +R+ F + A ++ VG +V+ IS M+ SADVLA +T EVD++ I
Sbjct: 20 ETGEGGVRRRDFINIAAVSAAGVG---GAAVLYPLISQMAPSADVLAESTTEVDVSAIEP 76
Query: 275 GQSVTFKWRGKPLFIR 290
GQ++ +R +PLF+R
Sbjct: 77 GQAIKAVFRKQPLFVR 92
>gi|115525972|ref|YP_782883.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
gi|115519919|gb|ABJ07903.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
Length = 178
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 84
E R+ ++ G + +G +V+ +S M+ +A +A +EVDL + EGQ
Sbjct: 8 EAPTRRDVLFLATGAVAAIGTA---AVIWPMVSQMNPNAATVAAGFPLEVDLAPLAEGQV 64
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
+ WRG+P+FI HRT KEI+ QN + RDPQ DSDRVK WLV+ ICTHLGC
Sbjct: 65 IKVFWRGQPIFINHRTPKEIEAAQNADWKSFRDPQPDSDRVKAGHEQWLVVSAICTHLGC 124
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+P + G++ G++C CHGS YD+SGR R GPAP N+ + PY+F
Sbjct: 125 IPTEHMGNYEGWFCQCHGSQYDSSGRARLGPAPLNLALVPYEF 167
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 277
E R+ ++ G + +G +V+ +S M+ +A +A +EVDL + EGQ
Sbjct: 8 EAPTRRDVLFLATGAVAAIGTA---AVIWPMVSQMNPNAATVAAGFPLEVDLAPLAEGQV 64
Query: 278 VTFKWRGKPLFIRHR 292
+ WRG+P+FI HR
Sbjct: 65 IKVFWRGQPIFINHR 79
>gi|254459484|ref|ZP_05072900.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium HTCC2083]
gi|206676073|gb|EDZ40560.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacteraceae bacterium HTCC2083]
Length = 190
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 14/150 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I+VD++ I G +T KW GKP+FIR RT++EI + +S L
Sbjct: 38 LVNQMNPSADVRALSSIQVDISGIEPGTQLTVKWLGKPVFIRRRTEEEITEARAVELSDL 97
Query: 116 RDPQA-----------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D A D +R D + WLV++G+CTHLGCVP+ + AGD+ G++CPCHGS
Sbjct: 98 IDDDARNTNLGDADASDENRALDETGEWLVMMGVCTHLGCVPLGDGAGDYHGWFCPCHGS 157
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
HYD SGRIRKGPAPTN+ VPP F D+ L
Sbjct: 158 HYDTSGRIRKGPAPTNLPVPPVAFVDDSTL 187
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I+VD++ I G +T KW GKP+FIR R
Sbjct: 38 LVNQMNPSADVRALSSIQVDISGIEPGTQLTVKWLGKPVFIRRR 81
>gi|114569287|ref|YP_755967.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Maricaulis
maris MCS10]
gi|114339749|gb|ABI65029.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Maricaulis
maris MCS10]
Length = 207
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 95/148 (64%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ +AD LA+ +I VD++++P G +T WRG P+FIRHRT++EI + + L
Sbjct: 40 FIDQMNPAADTLALGSIRVDVSVVPVGSEITVMWRGGPVFIRHRTEEEIAEARAVELDAL 99
Query: 116 RD------------PQADSDRVKDPSWLVIIGICTHLGCVPI---ANAGDWGGYYCPCHG 160
D P D++RV P +L++ G CTHLGCVP+ AN GD+ G+YCPCHG
Sbjct: 100 PDEDARNDNLPAGVPGTDANRVLRPEFLIVKGNCTHLGCVPLGLAANTGDYDGWYCPCHG 159
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD S RIR+GPAP N+ VP Y F E
Sbjct: 160 SHYDTSARIRRGPAPENLPVPDYYFETE 187
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M+ +AD LA+ +I VD++++P G +T WRG P+FIRHR
Sbjct: 40 FIDQMNPAADTLALGSIRVDVSVVPVGSEITVMWRGGPVFIRHR 83
>gi|56695188|ref|YP_165535.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria
pomeroyi DSS-3]
gi|56676925|gb|AAV93591.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria
pomeroyi DSS-3]
Length = 187
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 113/182 (62%), Gaps = 19/182 (10%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
E T+R Y AG G+V + V ++ M+ SADV A+++I VD++ + G
Sbjct: 7 HEGTRRDFLYYATAG----AGVVTTGAAVWPLVNQMNPSADVQALSSIRVDISGVEVGTQ 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQL-----RDPQ-------ADSDRVKDPS--W 130
++ K+ GKP+FIR RTQ EID + ++S L R+P D +R D + W
Sbjct: 63 ISVKFLGKPVFIRRRTQAEIDEARAVDLSDLIDNDSRNPNLSGGGDGGDENRSLDENGEW 122
Query: 131 LVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
LV++G+CTHLGCVP+ + AGD+ G++CPCHGSHYD SGRIRKGPAP N+ +P +F DE
Sbjct: 123 LVMMGVCTHLGCVPLGDGAGDFHGWFCPCHGSHYDTSGRIRKGPAPENLHIPVAEFVDEN 182
Query: 190 IL 191
+
Sbjct: 183 TI 184
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
E T+R Y AG G+V + V ++ M+ SADV A+++I VD++ + G
Sbjct: 7 HEGTRRDFLYYATAG----AGVVTTGAAVWPLVNQMNPSADVQALSSIRVDISGVEVGTQ 62
Query: 278 VTFKWRGKPLFIRHR 292
++ K+ GKP+FIR R
Sbjct: 63 ISVKFLGKPVFIRRR 77
>gi|39934091|ref|NP_946367.1| ubiquinol-cytochrome-c reductase Rieske iron-sulfur protein
[Rhodopseudomonas palustris CGA009]
gi|192289618|ref|YP_001990223.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Rhodopseudomonas palustris TIE-1]
gi|39647939|emb|CAE26459.1| ubiquinol-cytochrome-c reductase, Rieske iron-sulfur protein
[Rhodopseudomonas palustris CGA009]
gi|192283367|gb|ACE99747.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris TIE-1]
Length = 177
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 84
E+ R+ Y+ G + VG ++V F+S ++ A +A +EVDL I EGQ
Sbjct: 7 EQPSRRDVLYLATGALAAVGTA---AMVWPFVSQLNPDAGTVAAGFPLEVDLAPISEGQV 63
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
V WRG+P+FI HRT KEI + Q+ + RDP+ DS RVK WLV+ ICTHLGC
Sbjct: 64 VKVFWRGQPIFISHRTPKEIQSAQSADWQSFRDPEPDSARVKPGKEQWLVVSAICTHLGC 123
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
VP + G++ G++C CHGS YD++GRIR GPAP N+ + PY+F + +I
Sbjct: 124 VPTEHQGNYDGWFCQCHGSQYDSAGRIRLGPAPRNLPLVPYKFATDTQII 173
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQS 277
E+ R+ Y+ G + VG ++V F+S ++ A +A +EVDL I EGQ
Sbjct: 7 EQPSRRDVLYLATGALAAVGTA---AMVWPFVSQLNPDAGTVAAGFPLEVDLAPISEGQV 63
Query: 278 VTFKWRGKPLFIRHR 292
V WRG+P+FI HR
Sbjct: 64 VKVFWRGQPIFISHR 78
>gi|255262475|ref|ZP_05341817.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Thalassiobium sp. R2A62]
gi|255104810|gb|EET47484.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Thalassiobium sp. R2A62]
Length = 187
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 101/148 (68%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+A+I VD+ I G +T W+GKP+FIR+RT+ EI+ + +++ L
Sbjct: 34 LVNQMNPSADVQALASIRVDVGDIAPGTQLTVLWQGKPVFIRYRTEAEIEEARAVDVAAL 93
Query: 116 RD------------PQADSDRV--KDPSWLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D P D +R ++ WLV++G+CTHLGCVP+ + AGD+GG++CPCHG
Sbjct: 94 PDGMAANENIDAAAPATDENRALGENDEWLVMMGVCTHLGCVPLGDGAGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD +GRIRKGPAPTN+ VP +F DE
Sbjct: 154 SHYDTAGRIRKGPAPTNLLVPVAEFADE 181
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+A+I VD+ I G +T W+GKP+FIR+R
Sbjct: 34 LVNQMNPSADVQALASIRVDVGDIAPGTQLTVLWQGKPVFIRYR 77
>gi|333755401|gb|AEF97509.1| Rieske iron-sulfur protein [Drosophila biarmipes]
Length = 85
Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 70/80 (87%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPETDDQRVVKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+L+
Sbjct: 64 PAPLNLEVPTHEFPNEGLLV 83
>gi|333755393|gb|AEF97505.1| Rieske iron-sulfur protein [Drosophila fuyamai]
Length = 85
Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 70/80 (87%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPETDDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+L+
Sbjct: 64 PAPLNLEVPTHEFPNEGLLV 83
>gi|402849824|ref|ZP_10898047.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
gi|402499886|gb|EJW11575.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodovulum
sp. PH10]
Length = 173
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQ 83
Q E R+ F Y+ G VG + + ++ M+ A + A A IEVDL+ I GQ
Sbjct: 4 QAEPSRRDFLYIATGA---VGAIGGALTLVPLVAQMNPDQATIAAGAPIEVDLSPIQPGQ 60
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLG 141
+ WR KP+FI HRT+ E+ Q+ +S L DPQ D R K +WLV+IGICTHLG
Sbjct: 61 VIKVSWRSKPIFIWHRTEDEVKQAQDVKLSALPDPQTDEQRTKPGHENWLVVIGICTHLG 120
Query: 142 CVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
C+PIA +GD+GG++CPCHGS YD SGRIRKGPAP N+ +PPYQF
Sbjct: 121 CIPIAKSGDYGGWFCPCHGSQYDDSGRIRKGPAPLNLPLPPYQF 164
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSA-SADVLAMATIEVDLNLIPEGQ 276
Q E R+ F Y+ G VG + + ++ M+ A + A A IEVDL+ I GQ
Sbjct: 4 QAEPSRRDFLYIATGA---VGAIGGALTLVPLVAQMNPDQATIAAGAPIEVDLSPIQPGQ 60
Query: 277 SVTFKWRGKPLFIRHR 292
+ WR KP+FI HR
Sbjct: 61 VIKVSWRSKPIFIWHR 76
>gi|289742959|gb|ADD20227.1| ubiquinol cytochrome c reductase subunit RIP1 [Glossina morsitans
morsitans]
Length = 174
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 2 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 53 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 112
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI TE+N ++ LRDP
Sbjct: 113 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHRTGAEIATERNVAVATLRDP 172
Query: 119 QA 120
Q+
Sbjct: 173 QS 174
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 77/101 (76%), Gaps = 3/101 (2%)
Query: 195 LAHSDIRTPDFSKYRRD--RNPDKGQEET-QRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
LAHSD+ PDF+ YRR+ +N ++ + QRKAF+YM+ G ++V AK +VN F+S
Sbjct: 53 LAHSDLEVPDFTPYRRENVKNANRRNDSAEQRKAFSYMLVGATAVGSAYAAKGLVNTFVS 112
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 113 SMSASADVLAMAKIEIKLGDIPEGKSVTFKWRGKPLFIRHR 153
>gi|240850139|ref|YP_002971532.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
grahamii as4aup]
gi|240267262|gb|ACS50850.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
grahamii as4aup]
Length = 182
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 108/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ + VGM +V FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTAVAGAVGM---GAVAWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
KWRG+P+ IR+RT KEI + T +S L+D QA + ++ +WL
Sbjct: 60 VKWRGQPVVIRNRTTKEIADARATELSLLKDRQARNPNLEGEKEATDFARSAGKGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++I +CTHLGCV + +G +GG+ CPCHGS YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 120 IVINLCTHLGCVTLGKSGKFGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYQFLSDTLL 179
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ + VGM +V FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTAVAGAVGM---GAVAWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ IR+R
Sbjct: 60 VKWRGQPVVIRNR 72
>gi|333755399|gb|AEF97508.1| Rieske iron-sulfur protein [Drosophila eugracilis]
Length = 85
Score = 151 bits (382), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/80 (76%), Positives = 70/80 (87%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPETDDQRVVKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F +EG+L+
Sbjct: 64 PAPLNLEVPTHEFPNEGLLV 83
>gi|384411285|ref|YP_005620650.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|335931659|gb|AEH62199.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 198
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 23 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 78
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGI 136
+P GQ+V WR +P+FIRH T++EI +S LRDP+ + R K WLV + I
Sbjct: 76 VPPGQTVKVVWRDQPVFIRHLTEQEITEANAVALSDLRDPETLAQRTKAGKQDWLVTMAI 135
Query: 137 CTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CTHLGC+P + G++GGY C CHGS +D +GRIR+GPAPTN+ VPPY+F
Sbjct: 136 CTHLGCIPQGSHAGEPRGEYGGYICSCHGSAFDTAGRIRRGPAPTNLVVPPYRF 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 216 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 271
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 272 IPEGQSVTFKWRGKPLFIRH 291
+P GQ+V WR +P+FIRH
Sbjct: 76 VPPGQTVKVVWRDQPVFIRH 95
>gi|260752588|ref|YP_003225481.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258551951|gb|ACV74897.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 198
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 106/174 (60%), Gaps = 14/174 (8%)
Query: 23 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 78
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGI 136
+P GQ+V WR +P+FIRH T++EI +S LRDP+ + R K WLV + I
Sbjct: 76 VPPGQTVKVVWRDQPVFIRHLTEQEITEANAVALSDLRDPETLAQRTKAGKQDWLVTMAI 135
Query: 137 CTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CTHLGC+P + G++GGY C CHGS +D +GRIR+GPAPTN+ VPPY F
Sbjct: 136 CTHLGCIPQGSHAGEPRGEYGGYICSCHGSAFDTAGRIRRGPAPTNLVVPPYHF 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 216 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 271
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 272 IPEGQSVTFKWRGKPLFIRH 291
+P GQ+V WR +P+FIRH
Sbjct: 76 VPPGQTVKVVWRDQPVFIRH 95
>gi|407799751|ref|ZP_11146629.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Oceaniovalibus guishaninsula JLT2003]
gi|407058228|gb|EKE44186.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Oceaniovalibus guishaninsula JLT2003]
Length = 186
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 100/151 (66%), Gaps = 14/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ M+ S+DV A+++I VD+ + G +T KW GKP+FIR RT++EI + ++S L
Sbjct: 34 LVDQMNPSSDVQALSSIRVDVGGVEPGTQLTVKWLGKPVFIRRRTEEEILEARAVDVSSL 93
Query: 116 RDPQA------------DSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
DP A D +R D WLV++G+CTHLGCVP+ +AGD+GG++CPCHGS
Sbjct: 94 PDPFAENANIDGTAPATDENRTLDGREDWLVMMGVCTHLGCVPLGDAGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
HYD +GRIR+GPAP N+ VP +F DE ++
Sbjct: 154 HYDTAGRIRRGPAPKNLPVPVAEFVDETTIV 184
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ M+ S+DV A+++I VD+ + G +T KW GKP+FIR R
Sbjct: 34 LVDQMNPSSDVQALSSIRVDVGGVEPGTQLTVKWLGKPVFIRRR 77
>gi|283856372|ref|YP_162691.2| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ZM4]
gi|283775371|gb|AAV89580.2| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 198
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 23 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 78
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGI 136
+P GQ+V WR +P+FIRH T++EI +S LRDP+ + R K WLV + I
Sbjct: 76 VPPGQTVKVVWRDQPVFIRHLTEQEITEANAVALSDLRDPETLAQRTKAGKQDWLVTMAI 135
Query: 137 CTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CTHLGC+P + G++GGY C CHGS +D +GRIR+GPAPTN+ VPPY+F
Sbjct: 136 CTHLGCIPQGSHAGEPRGEYGGYICSCHGSAFDTAGRIRRGPAPTNLVVPPYRF 189
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 216 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 271
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 19 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQGKTEVDIST 75
Query: 272 IPEGQSVTFKWRGKPLFIRH 291
+P GQ+V WR +P+FIRH
Sbjct: 76 VPPGQTVKVVWRDQPVFIRH 95
>gi|395788358|ref|ZP_10467922.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
birtlesii LL-WM9]
gi|395408275|gb|EJF74886.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
birtlesii LL-WM9]
Length = 189
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 109/184 (59%), Gaps = 18/184 (9%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
K E R+ F +++ G + VGM V FI + VLA +++EVDL+ I EG
Sbjct: 6 KIMSEQTRRDFLFLLTGVTGTVGM---GIVAWPFIHQLRPDGAVLAASSVEVDLSGIEEG 62
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-------------- 128
S+T KWRG+P+ IR+RT KEI + T +S L+D QA + V+
Sbjct: 63 MSITVKWRGQPVVIRNRTAKEIAEARATKLSVLKDRQARNPNVEGEKEATDFARSAGKGR 122
Query: 129 -SWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
+WL++I +CTHLGCV + +G +GG+ CPCHGS YD +GR+R GPA N+ +PPY+F
Sbjct: 123 ENWLILINLCTHLGCVTLDQSGKFGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYKFLS 182
Query: 188 EGIL 191
+ +L
Sbjct: 183 DTLL 186
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
K E R+ F +++ G + VGM V FI + VLA +++EVDL+ I EG
Sbjct: 6 KIMSEQTRRDFLFLLTGVTGTVGM---GIVAWPFIHQLRPDGAVLAASSVEVDLSGIEEG 62
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRG+P+ IR+R
Sbjct: 63 MSITVKWRGQPVVIRNR 79
>gi|260425576|ref|ZP_05779556.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Citreicella
sp. SE45]
gi|260423516|gb|EEX16766.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Citreicella
sp. SE45]
Length = 200
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 103/156 (66%), Gaps = 19/156 (12%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A++TI VD++ + G +T KW GKP+FIR RT+ EI+ ++ +SQL
Sbjct: 43 LVNQMNPSADVRALSTIRVDVSGVDTGTQLTVKWLGKPVFIRRRTEAEIEEGRSVEMSQL 102
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIANAGDW-----GGYYC 156
D A D +R D + WLV++G+CTHLGCVPI NAG++ GG++C
Sbjct: 103 VDSVARNANIDSGAQATDQNRTLDEAGEWLVMMGVCTHLGCVPIGNAGEFTAGGVGGWFC 162
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD +GRIRKGPAP N+ VP +F +E ++
Sbjct: 163 PCHGSHYDTAGRIRKGPAPQNLPVPAAEFVEETTIL 198
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A++TI VD++ + G +T KW GKP+FIR R
Sbjct: 43 LVNQMNPSADVRALSTIRVDVSGVDTGTQLTVKWLGKPVFIRRR 86
>gi|85709694|ref|ZP_01040759.1| ubiquinol-cytochrome-c reductase [Erythrobacter sp. NAP1]
gi|85688404|gb|EAQ28408.1| ubiquinol-cytochrome-c reductase [Erythrobacter sp. NAP1]
Length = 182
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 110/171 (64%), Gaps = 10/171 (5%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+E +R+ + ++ A ++ VG SV+ IS M+ +ADVLA +T +VD++ + GQS
Sbjct: 9 EEGVRRRDWIHIAAVSTAGVG---GASVLFPLISQMAPTADVLAASTTDVDVSSLEPGQS 65
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDR--VKDPSWLVIIGICTHLGC 142
+ +R +PLF++ T +EI+ + LRDPQ DR V + L+ +G+CTHLGC
Sbjct: 66 IKAVFREQPLFVKRLTPEEIEEVNAIDAGGLRDPQTLEDRLGVGNEDILINLGVCTHLGC 125
Query: 143 VPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
VP+ N G++ GY+CPCHGSHYDA GRIRKGPAPTN+EVP + F E
Sbjct: 126 VPLGAAEGENKGEFDGYFCPCHGSHYDALGRIRKGPAPTNLEVPEFSFTTE 176
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+E +R+ + ++ A ++ VG SV+ IS M+ +ADVLA +T +VD++ + GQS
Sbjct: 9 EEGVRRRDWIHIAAVSTAGVG---GASVLFPLISQMAPTADVLAASTTDVDVSSLEPGQS 65
Query: 278 VTFKWRGKPLFIR 290
+ +R +PLF++
Sbjct: 66 IKAVFREQPLFVK 78
>gi|114764178|ref|ZP_01443416.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pelagibaca
bermudensis HTCC2601]
gi|114543330|gb|EAU46346.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. HTCC2601]
Length = 191
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/156 (45%), Positives = 104/156 (66%), Gaps = 19/156 (12%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A++TI VD++ + G +T ++ GKP+FIR RT+ EI+ Q +S+L
Sbjct: 34 LVNQMNPSADVRALSTIRVDVSGVETGTQLTVQYLGKPVFIRRRTEAEIEAAQGVEMSEL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIANAGDW-----GGYYC 156
DP A D++R D + WLV++G+CTHLGCVP+ NAG++ GG++C
Sbjct: 94 VDPVARNPNIPEGADATDANRALDETGEWLVMMGVCTHLGCVPLGNAGEYTAGGVGGWFC 153
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
PCHGSHYD +GRIRKGPAP N+ VP +F +E ++
Sbjct: 154 PCHGSHYDTAGRIRKGPAPQNLPVPTAEFVEETTIL 189
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A++TI VD++ + G +T ++ GKP+FIR R
Sbjct: 34 LVNQMNPSADVRALSTIRVDVSGVETGTQLTVQYLGKPVFIRRR 77
>gi|13472419|ref|NP_103986.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Mesorhizobium
loti MAFF303099]
gi|14023165|dbj|BAB49772.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mesorhizobium
loti MAFF303099]
Length = 186
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 15/152 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+RT+KE+ + N+S L
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEKEMKDGEAVNLSDL 93
Query: 116 RDPQA------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D++R +W+V++ +CTHLGC+P+ GD+GG++CPCHGS
Sbjct: 94 KDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD +GRIRKGPAP NM VP ++F D ILI
Sbjct: 154 QYDTAGRIRKGPAPENMAVPVFKFISDTKILI 185
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+R
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNR 77
>gi|395781877|ref|ZP_10462287.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
rattimassiliensis 15908]
gi|395420319|gb|EJF86600.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
rattimassiliensis 15908]
Length = 182
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 109/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ ++V G V V FI + +VLA ++IEVD++ I EG SVT
Sbjct: 3 EQTRRDFLFLV---TAVAGAVGIGVVAWPFIRQLRPDENVLASSSIEVDVSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
KWRG+P+ IR+RT KEI ++T + L+D QA + + +WL
Sbjct: 60 VKWRGQPVVIRNRTAKEIADARDTELRLLKDRQARNPNFEGEKEATDFARSAGKGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++I +CTHLGCV + +G +GG++CPCHGS YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 120 IVINLCTHLGCVTLGQSGKFGGWFCPCHGSVYDTAGRVRSGPANYNLAIPPYQFLSDTLL 179
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ ++V G V V FI + +VLA ++IEVD++ I EG SVT
Sbjct: 3 EQTRRDFLFLV---TAVAGAVGIGVVAWPFIRQLRPDENVLASSSIEVDVSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ IR+R
Sbjct: 60 VKWRGQPVVIRNR 72
>gi|85707038|ref|ZP_01038127.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. 217]
gi|85668479|gb|EAQ23351.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. 217]
Length = 200
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 100/158 (63%), Gaps = 21/158 (13%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+SM+ SADV A T+ VDL+ + GQ +T KW+G+P+F+ R+ I+ + ++ QL
Sbjct: 40 LINSMNPSADVTASGTVRVDLSGVEPGQRITVKWQGRPVFVWRRSPAAIEAARAVDLDQL 99
Query: 116 RDP---------------QADSDRV--KDPSWLVIIGICTHLGCVPIAN----AGDWGGY 154
DP D +R +D WL++IG+CTHLGC+P+ G++GG+
Sbjct: 100 PDPVDEAVENPNASSEEPALDENRAAGEDGEWLIVIGVCTHLGCIPLGQDGSAVGEFGGW 159
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
+CPCHGSHYD SGRIRKGPAP N+++PPY GD+ L+
Sbjct: 160 FCPCHGSHYDTSGRIRKGPAPRNLDIPPYDLGDDLQLV 197
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+SM+ SADV A T+ VDL+ + GQ +T KW+G+P+F+ R
Sbjct: 40 LINSMNPSADVTASGTVRVDLSGVEPGQRITVKWQGRPVFVWRR 83
>gi|397676234|ref|YP_006517772.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ATCC 29191]
gi|395396923|gb|AFN56250.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Zymomonas
mobilis subsp. mobilis ATCC 29191]
Length = 210
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 23 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 78
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 31 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQEKTEVDIST 87
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGI 136
+P GQ+V WR +P+FIRH T++EI +S LRDP+ + R K WLV + I
Sbjct: 88 VPPGQTVKVVWRDQPVFIRHLTEQEITEANAVALSDLRDPETLAQRTKAGKQDWLVTMAI 147
Query: 137 CTHLGCVPIANA-----GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
CTHLGC+P + G++GGY C CHGS +D +GRIR+GPAP+N+ VPPY+F
Sbjct: 148 CTHLGCIPQGSHAGEPRGEYGGYICSCHGSAFDTAGRIRRGPAPSNLVVPPYRF 201
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 216 KGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNL 271
+GQ ET R+ F + A G + +G VC ++ FI+ M+ S DV EVD++
Sbjct: 31 EGQPETSDSLDRRDFLNVAAAGLAGIG-VCGAAI--PFIAQMNPSKDVSEQEKTEVDIST 87
Query: 272 IPEGQSVTFKWRGKPLFIRH 291
+P GQ+V WR +P+FIRH
Sbjct: 88 VPPGQTVKVVWRDQPVFIRH 107
>gi|83949961|ref|ZP_00958694.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
nubinhibens ISM]
gi|83837860|gb|EAP77156.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
nubinhibens ISM]
Length = 153
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 97/146 (66%), Gaps = 18/146 (12%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD-- 117
M+ SADV A+++I VD++ I G +T KW GKP+FIR RT +EI+ + +SQL D
Sbjct: 1 MNPSADVQALSSIRVDVSGIEPGTQLTVKWLGKPVFIRRRTPEEIEEAKAVELSQLPDQD 60
Query: 118 ---------PQADSDRV-------KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
P +D++R WLV++G+CTHLGCVP+ +AGD+GG++CPCHGS
Sbjct: 61 ARNANIGPAPASDNNRALAVPGEEGSEEWLVMMGVCTHLGCVPLGDAGDFGGWFCPCHGS 120
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGD 187
HYD +GRIRKGPAP N+ VP +F D
Sbjct: 121 HYDTAGRIRKGPAPENLPVPTAEFVD 146
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ SADV A+++I VD++ I G +T KW GKP+FIR R
Sbjct: 1 MNPSADVQALSSIRVDVSGIEPGTQLTVKWLGKPVFIRRR 40
>gi|344923014|ref|ZP_08776475.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Candidatus
Odyssella thessalonicensis L13]
Length = 184
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 112/181 (61%), Gaps = 8/181 (4%)
Query: 18 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 77
D N + +T R+ F ++ + V A + + FI SM+ + DVLA +T++VD++
Sbjct: 4 DHNISEESPQTTRRDFIHI---SACAFAAVGAGAAIVPFIDSMNPADDVLASSTVDVDVS 60
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGIC 137
+ G S+T WRGKP+FI+ RT++E+ + + L+DPQ D RV+ P WLV+IG+C
Sbjct: 61 KLNPGDSLTAMWRGKPIFIKRRTEEEVKAVRAIPLKDLKDPQTDQSRVERPDWLVVIGVC 120
Query: 138 THLGCVPIAN----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILIR 193
THLGC+P AG+ G+ C CHGS YD SGRI GPAP N+ VP Y F ++ +IR
Sbjct: 121 THLGCIPTLRKNLMAGN-DGWLCACHGSRYDGSGRIISGPAPANLAVPAYTFINDNKVIR 179
Query: 194 M 194
+
Sbjct: 180 I 180
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 211 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 270
D N + +T R+ F ++ + V A + + FI SM+ + DVLA +T++VD++
Sbjct: 4 DHNISEESPQTTRRDFIHI---SACAFAAVGAGAAIVPFIDSMNPADDVLASSTVDVDVS 60
Query: 271 LIPEGQSVTFKWRGKPLFIRHR 292
+ G S+T WRGKP+FI+ R
Sbjct: 61 KLNPGDSLTAMWRGKPIFIKRR 82
>gi|393722718|ref|ZP_10342645.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
sp. PAMC 26605]
Length = 190
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 106/167 (63%), Gaps = 9/167 (5%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ E +R+ F + A SV G V A ++V I+ M+ SADVLA+AT EVDL+ I GQ
Sbjct: 18 EGEPRRRDFLNIAA--VSVAG-VGAIAIVVPLINQMNPSADVLALATTEVDLSKIEVGQG 74
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK-DPSWLVIIGICTHLGCV 143
V +R +PLF+R+ T EI +I LRDP+ + R + +WL+ +G+CTHLGC+
Sbjct: 75 VVVSFRKQPLFVRNLTPAEIAAADKVDIKTLRDPETLTQRTRGKKNWLITLGVCTHLGCI 134
Query: 144 PIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
P + G +GGY+CPCHGS YD + RIRKGPAP N+ VP Y+F
Sbjct: 135 PQGITSGEDRGQFGGYFCPCHGSQYDTAARIRKGPAPKNLFVPDYKF 181
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ E +R+ F + A SV G V A ++V I+ M+ SADVLA+AT EVDL+ I GQ
Sbjct: 18 EGEPRRRDFLNIAA--VSVAG-VGAIAIVVPLINQMNPSADVLALATTEVDLSKIEVGQG 74
Query: 278 VTFKWRGKPLFIRH 291
V +R +PLF+R+
Sbjct: 75 VVVSFRKQPLFVRN 88
>gi|333755397|gb|AEF97507.1| Rieske iron-sulfur protein [Drosophila lucipennis]
Length = 85
Score = 150 bits (378), Expect = 8e-34, Method: Composition-based stats.
Identities = 62/80 (77%), Positives = 69/80 (86%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPYQFGDEGILI 192
PAP N+EVP ++F E +LI
Sbjct: 64 PAPLNLEVPTHEFPSEDLLI 83
>gi|383648360|ref|ZP_09958766.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sphingomonas
elodea ATCC 31461]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 97/144 (67%), Gaps = 7/144 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++SM+ SADVLA++T EV+L+ I GQ++ +R +PLF+R+ T EI +S L
Sbjct: 49 LVNSMNPSADVLALSTTEVNLDAIEPGQAIKASFRKQPLFVRNLTPAEIAQADAVPVSSL 108
Query: 116 RDPQADSDRVKD--PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGR 168
RDPQ R + +WL+ +G+CTHLGCVP+ + G +GGY+CPCHGS YD +GR
Sbjct: 109 RDPQTLEQRTAEGHKNWLITLGVCTHLGCVPLGAGEGESKGPFGGYFCPCHGSAYDTAGR 168
Query: 169 IRKGPAPTNMEVPPYQFGDEGILI 192
IR+GPAP N+EVP Y F + +++
Sbjct: 169 IRQGPAPKNLEVPKYNFTSDTVVV 192
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
++SM+ SADVLA++T EV+L+ I GQ++ +R +PLF+R+
Sbjct: 49 LVNSMNPSADVLALSTTEVNLDAIEPGQAIKASFRKQPLFVRN 91
>gi|372280423|ref|ZP_09516459.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oceanicola
sp. S124]
Length = 194
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 108/186 (58%), Gaps = 26/186 (13%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
E T+R Y AG +V +VNQ ASADV A+++I VD++ + EG
Sbjct: 7 HEGTRRDFLYYATAGAGAVATGAAVWPLVNQMN----ASADVQALSSIRVDVSGVEEGTQ 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------DSDRVKDP---- 128
+T KWRGKP+FIR RTQ EID + + L DP A D +R P
Sbjct: 63 ITVKWRGKPVFIRRRTQAEIDAANEVDPASLPDPLARNGNIDAGAPATDPNRALAPEGAE 122
Query: 129 -----SWLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPP 182
WLV++G+CTHLGCVP+ + AGD+GG++CPCHGSHYD +GRIRKGPAP N+ VP
Sbjct: 123 GKAAEEWLVMMGVCTHLGCVPLGDGAGDFGGWFCPCHGSHYDTAGRIRKGPAPQNLPVPV 182
Query: 183 YQFGDE 188
F E
Sbjct: 183 AAFDGE 188
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ASADV A+++I VD++ + EG +T KWRGKP+FIR R
Sbjct: 34 LVNQMNASADVQALSSIRVDVSGVEEGTQITVKWRGKPVFIRRR 77
>gi|395493860|ref|ZP_10425439.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
sp. PAMC 26617]
gi|404254184|ref|ZP_10958152.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
sp. PAMC 26621]
Length = 171
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 9/163 (5%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ F + A ++ +G A + I+ M+ SADVLA++T EVDL+ I G +
Sbjct: 3 RRRDFLNIAAVATAGIGGAIA---IVPLINQMNPSADVLALSTTEVDLSKIEAGSGIVTS 59
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK-DPSWLVIIGICTHLGCVPIA- 146
+R +PLF+R+ T EI +S+LRDPQ R K +WL+ +G+CTHLGC+P
Sbjct: 60 FRKQPLFVRNLTPAEIAAADKVALSELRDPQTLEQRTKGKKNWLITLGVCTHLGCIPQGI 119
Query: 147 ----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
N G +GGY+CPCHGS YD + RIRKGPAP N+ VP Y+F
Sbjct: 120 VSSENRGQYGGYFCPCHGSQYDTAARIRKGPAPKNLAVPDYKF 162
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ F + A ++ +G A + I+ M+ SADVLA++T EVDL+ I G +
Sbjct: 3 RRRDFLNIAAVATAGIGGAIA---IVPLINQMNPSADVLALSTTEVDLSKIEAGSGIVTS 59
Query: 282 WRGKPLFIRH 291
+R +PLF+R+
Sbjct: 60 FRKQPLFVRN 69
>gi|163867934|ref|YP_001609138.1| ubiquinol-cytochrome c reductase iron-sulfur subunit FbcF
[Bartonella tribocorum CIP 105476]
gi|161017585|emb|CAK01143.1| ubiquinol-cytochrome c reductase iron-sulfur subunit FbcF
[Bartonella tribocorum CIP 105476]
Length = 182
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 105/177 (59%), Gaps = 18/177 (10%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F +++ + VGM V FI + VLA +++EVDL+ I EG SVT KW
Sbjct: 6 RRDFLFLVTAVAGAVGM---GVVTWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVTVKW 62
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWLVII 134
RG+P+ IR+RT KEI + N+S L+D QA + + +WL++I
Sbjct: 63 RGQPVVIRNRTAKEISDARAVNLSLLKDRQARNPNFEGEKEATDFARSAGKGRENWLIVI 122
Query: 135 GICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+CTHLGCV + +G +GG+ CPCHGS YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 123 NLCTHLGCVTLGQSGKFGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYQFLSDTLL 179
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F +++ + VGM V FI + VLA +++EVDL+ I EG SVT KW
Sbjct: 6 RRDFLFLVTAVAGAVGM---GVVTWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVTVKW 62
Query: 283 RGKPLFIRHR 292
RG+P+ IR+R
Sbjct: 63 RGQPVVIRNR 72
>gi|395767359|ref|ZP_10447894.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
doshiae NCTC 12862]
gi|395414672|gb|EJF81114.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
doshiae NCTC 12862]
Length = 182
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 108/180 (60%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ G + VG+ +V I + VLA +++EVD++ I EG SVT
Sbjct: 3 EQTRRDFLFLLTGLTGAVGI---GAVAWPLIRQICPDESVLASSSVEVDISGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
+WRG+P+ IR+RT KEI + +S L+DPQA + ++ +WL
Sbjct: 60 VQWRGQPVVIRNRTAKEIAEARTVELSLLKDPQARNPNLEGEKEATDFARSAGEGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
++I +CTHLGCV + +G +GG+ CPCHGS YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 120 ILINLCTHLGCVTLGQSGRFGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYQFLSDTLL 179
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ G + VG+ +V I + VLA +++EVD++ I EG SVT
Sbjct: 3 EQTRRDFLFLLTGLTGAVGI---GAVAWPLIRQICPDESVLASSSVEVDISGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
+WRG+P+ IR+R
Sbjct: 60 VQWRGQPVVIRNR 72
>gi|390467137|ref|XP_003733714.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b-c1 complex subunit
Rieske, mitochondrial-like [Callithrix jacchus]
Length = 263
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 7/194 (3%)
Query: 5 SDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 60
+DI PDF YR D + + +K F+ ++ ++V AK+V++Q ISS+
Sbjct: 70 TDINVPDFPDYRYTEIFDGTKSSKEGDEAKKRFSCLVTATAAVGVASAAKNVISQLISSI 129
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
+ASAD LAM+ I++ L+ IPE +++ F+WRGKP+ + HRT+KE D + SQLR PQ
Sbjct: 130 NASADELAMSKIKIKLSDIPEDKNMAFRWRGKPMXVCHRTKKETDRDAAVEESQLRXPQH 189
Query: 121 D-SDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D R P + ++G+C H P AN G + G YCPC GSH DASG I KGPAP ++E
Sbjct: 190 DLRARRXXPVRVSLLGLCIHXSYAPTANEG-FAGDYCPCCGSHXDASGGIWKGPAPLDLE 248
Query: 180 VPPYQF-GDEGILI 192
P Y+F DE + +
Sbjct: 249 PPSYEFTSDETVTV 262
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 198 SDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSM 253
+DI PDF YR D + + +K F+ ++ ++V AK+V++Q ISS+
Sbjct: 70 TDINVPDFPDYRYTEIFDGTKSSKEGDEAKKRFSCLVTATAAVGVASAAKNVISQLISSI 129
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ASAD LAM+ I++ L+ IPE +++ F+WRGKP+ + HR
Sbjct: 130 NASADELAMSKIKIKLSDIPEDKNMAFRWRGKPMXVCHR 168
>gi|405382037|ref|ZP_11035859.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. CF142]
gi|397321525|gb|EJJ25941.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
sp. CF142]
Length = 191
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + +S L
Sbjct: 38 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVQLSDL 97
Query: 116 RDP--------------QADSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP AD KD +W+V+IG CTHLGCVP+ AG++ G++CPCHG
Sbjct: 98 KDPIARNANLPADAPATGADRSGGKDKENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHG 157
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 158 SVYDTAGRIRKGPAPQNLAIPTFSF 182
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 38 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNR 81
>gi|420245220|ref|ZP_14748874.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, partial
[Rhizobium sp. CF080]
gi|398048330|gb|EJL40806.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit, partial
[Rhizobium sp. CF080]
Length = 177
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 103/167 (61%), Gaps = 18/167 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VG V SV FI M A LA+A+IEV++ + G S+T
Sbjct: 13 EPTRRDFLYLTTGMAGAVGAV---SVAWPFIDQMRPDASTLALASIEVNVAALQPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------DR---VKDPSWL 131
KWRGKP+FIR+RT +EI + +++L+DP A + DR +W+
Sbjct: 70 VKWRGKPVFIRNRTPEEIKAAADVPMAELKDPVARNANLAPDAQATGIDRSGGAGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
V+IG CTHLGCVP+ +G++ G++CPCHGS YD +GRIRKGPAP N+
Sbjct: 130 VMIGSCTHLGCVPLGQSGEYNGWFCPCHGSVYDTAGRIRKGPAPENL 176
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VG V SV FI M A LA+A+IEV++ + G S+T
Sbjct: 13 EPTRRDFLYLTTGMAGAVGAV---SVAWPFIDQMRPDASTLALASIEVNVAALQPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPVFIRNR 82
>gi|421591122|ref|ZP_16036029.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium sp.
Pop5]
gi|403703486|gb|EJZ19704.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium sp.
Pop5]
Length = 192
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + +S L
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLTPGMSLTVKWRGKPIFIRNRTPEEVKAAADVALSDL 98
Query: 116 RDPQA--------------DSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V+IG CTHLGCVP+ AG++ G++CPCHG
Sbjct: 99 KDPIARNANLPADAQATGVDRSGGKDKENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLTPGMSLTVKWRGKPIFIRNR 82
>gi|433773532|ref|YP_007303999.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium australicum WSM2073]
gi|433665547|gb|AGB44623.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium australicum WSM2073]
Length = 186
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 100/152 (65%), Gaps = 15/152 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A++EVD++ + G S+ KWRGKP+ +R+RT+KE+ + ++S L
Sbjct: 34 FIDQMRPDASTLALASVEVDVSSLTPGSSLIVKWRGKPVVVRNRTEKEMKDGEAVSLSDL 93
Query: 116 RDPQA------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D++R +W+V++ +CTHLGC+P+ GD+GG++CPCHGS
Sbjct: 94 KDPIARNANLPSDAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD +GRIRKGPAP NM +P ++F D +LI
Sbjct: 154 QYDTAGRIRKGPAPENMAIPVFKFVSDTKLLI 185
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A++EVD++ + G S+ KWRGKP+ +R+R
Sbjct: 34 FIDQMRPDASTLALASVEVDVSSLTPGSSLIVKWRGKPVVVRNR 77
>gi|218458180|ref|ZP_03498271.1| ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein
[Rhizobium etli Kim 5]
Length = 192
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 106/174 (60%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVASLEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------DR---VKDPSWL 131
KWRGKP+FIR+RT +E+ + ++ L+DP A + DR +W+
Sbjct: 70 VKWRGKPIFIRNRTPEEVKAAADVPLADLKDPVARNANLPAEAQATGVDRSGGAGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 130 VMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPENLAIPTFSF 183
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVASLEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPIFIRNR 82
>gi|291612602|ref|YP_003522759.1| ubiquinol-Cytochrome C reductase, iron-sulfur subunit [Sideroxydans
lithotrophicus ES-1]
gi|291582714|gb|ADE10372.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sideroxydans
lithotrophicus ES-1]
Length = 170
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F++SM+ S+DVLA EVDL IP G T W+GKP+FI RT E+ + T+ +
Sbjct: 34 FVASMNPSSDVLAKGVTEVDLTGIPPGGLRTVAWQGKPVFILRRTPDEVKASEATDGTI- 92
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP+ADS RVK+P WLV+IG+CTH+GCVP + G+ C CHGS YD SGR+ +GPAP
Sbjct: 93 -DPEADSKRVKNPEWLVVIGVCTHMGCVP---NKEGEGFVCHCHGSQYDDSGRVVRGPAP 148
Query: 176 TNMEVPPYQF-GDEGILI 192
N+EVPPY F + ILI
Sbjct: 149 KNLEVPPYHFIAENKILI 166
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F++SM+ S+DVLA EVDL IP G T W+GKP+FI R
Sbjct: 34 FVASMNPSSDVLAKGVTEVDLTGIPPGGLRTVAWQGKPVFILRR 77
>gi|254436569|ref|ZP_05050063.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Octadecabacter antarcticus 307]
gi|198252015|gb|EDY76329.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Octadecabacter antarcticus 307]
Length = 203
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 109/192 (56%), Gaps = 34/192 (17%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 87
T R+ F Y G+ G V + V +SM+ SADVLA+A+I V ++ + G +T
Sbjct: 9 TTRRDFIYYATTGA---GAVITGAAVWPLANSMNPSADVLALASIRVPVDSVAPGTQLTV 65
Query: 88 KWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV------------------KDP- 128
W+GKP+FIR RT+ EI+ + I +L D A++ + ++P
Sbjct: 66 LWQGKPVFIRRRTETEIEAARAVGIDELVDMGAENANISGEAEATDENRALANFSPRNPD 125
Query: 129 -----------SWLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
WLV +G+CTHLGCVP+ + AGD+GG+YCPCHGSHYD +GRIRKGPAP
Sbjct: 126 GSMGVPVGTTGEWLVQMGVCTHLGCVPLGDGAGDFGGWYCPCHGSHYDTAGRIRKGPAPR 185
Query: 177 NMEVPPYQFGDE 188
N+ VP F DE
Sbjct: 186 NLPVPVASFVDE 197
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTF 280
T R+ F Y G+ G V + V +SM+ SADVLA+A+I V ++ + G +T
Sbjct: 9 TTRRDFIYYATTGA---GAVITGAAVWPLANSMNPSADVLALASIRVPVDSVAPGTQLTV 65
Query: 281 KWRGKPLFIRHR 292
W+GKP+FIR R
Sbjct: 66 LWQGKPVFIRRR 77
>gi|190892781|ref|YP_001979323.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
etli CIAT 652]
gi|190698060|gb|ACE92145.1| ubiquinol-cytochrome c reductase protein, iron-sulfur subunit
[Rhizobium etli CIAT 652]
Length = 192
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + ++ L
Sbjct: 39 FIDQMRPDASTLALASIEVDVATLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVPLADL 98
Query: 116 RDPQA--------------DSDRVKD-PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V+IG CTHLGCVP+ AG++ G++CPCHG
Sbjct: 99 KDPVARNANLPPEAQATGVDRSGGKDKENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVATLEPGMSLTVKWRGKPIFIRNR 82
>gi|409438356|ref|ZP_11265435.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
mesoamericanum STM3625]
gi|408749907|emb|CCM76604.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
mesoamericanum STM3625]
Length = 192
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 96/151 (63%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+RT +E+ ++ L
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTAKWRGKPIFIRNRTPEEVKAANEVPLTDL 98
Query: 116 RDPQA--------------DSDRVKD-PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V+IG CTHLGC+P+ AG++ G++CPCHG
Sbjct: 99 KDPIARNANLPSDAQATGVDRSAGKDKENWIVMIGSCTHLGCIPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
S YD +GRIRKGPAP N+ +P Y F + ++
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTYSFVSDKVI 189
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD++ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVSSLEPGMSLTAKWRGKPIFIRNR 82
>gi|310817234|ref|YP_003965198.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Ketogulonicigenium vulgare Y25]
gi|385234810|ref|YP_005796152.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Ketogulonicigenium vulgare WSH-001]
gi|308755969|gb|ADO43898.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Ketogulonicigenium vulgare Y25]
gi|343463721|gb|AEM42156.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Ketogulonicigenium vulgare WSH-001]
Length = 197
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/181 (41%), Positives = 106/181 (58%), Gaps = 17/181 (9%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D + R+ + A G+ G+V + V ++ M+ SADVLA A I VD++ +
Sbjct: 14 DDAHLDAPRRDLLKVAAIGT---GVVATGAAVWPLVNQMNPSADVLAEAKIRVDISAVQR 70
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD------------PQADSDRVKDPS 129
G+ +T W+G+P+FIR RT EI + + QL D P D++R P
Sbjct: 71 GEQITVLWQGRPVFIRARTDAEIARARADHPDQLPDGLARNANLDPNAPADDANRALSPD 130
Query: 130 --WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
WLV +G+CTHLGCVP+ +GD+ G++CPCHGSHYD +GRIRKGPAP N+ VP F D
Sbjct: 131 GIWLVQMGVCTHLGCVPVGQSGDYDGWFCPCHGSHYDTAGRIRKGPAPRNLPVPRAIFID 190
Query: 188 E 188
+
Sbjct: 191 D 191
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D + R+ + A G+ G+V + V ++ M+ SADVLA A I VD++ +
Sbjct: 14 DDAHLDAPRRDLLKVAAIGT---GVVATGAAVWPLVNQMNPSADVLAEAKIRVDISAVQR 70
Query: 275 GQSVTFKWRGKPLFIRHR 292
G+ +T W+G+P+FIR R
Sbjct: 71 GEQITVLWQGRPVFIRAR 88
>gi|241205742|ref|YP_002976838.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240859632|gb|ACS57299.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 192
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGMGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------D 127
S+T KWRGKP+FIR+RT +E++ ++ L+DP A + +
Sbjct: 66 MSLTVKWRGKPIFIRNRTPEEVEAANAVQLADLKDPVARNANLPVDAQATGVDRSGGKGK 125
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 126 ENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGMGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 66 MSLTVKWRGKPIFIRNR 82
>gi|337266786|ref|YP_004610841.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium opportunistum WSM2075]
gi|336027096|gb|AEH86747.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium opportunistum WSM2075]
Length = 186
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 98/152 (64%), Gaps = 15/152 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+RT++E+ + +S L
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEQEMKDGEAVKLSDL 93
Query: 116 RDPQA------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D++R +W+V++ +CTHLGC+P+ GD+GG++CPCHGS
Sbjct: 94 KDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD +GRIRKGPAP NM VP ++F D ILI
Sbjct: 154 QYDTAGRIRKGPAPENMAVPVFKFISDTKILI 185
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+R
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNR 77
>gi|22596702|gb|AAN03339.1|AF466752_1 FbcF [Rhizobium leguminosarum bv. viciae]
Length = 195
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 12 EGMGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 68
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------D 127
S+T KWRGKP+FIR+RT +E++ ++ L+DP A + +
Sbjct: 69 MSLTVKWRGKPIFIRNRTPEEVEAANAVQLADLKDPIARNANLPVDAQATAVDRSGGKGK 128
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 129 ENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPQNLAIPTFSF 186
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 12 EGMGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 68
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 69 MSLTVKWRGKPIFIRNR 85
>gi|116253228|ref|YP_769066.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|115257876|emb|CAK08974.1| putative ubiquinol-cytochrome c reductase iron-sulfur subunit
[Rhizobium leguminosarum bv. viciae 3841]
Length = 195
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 12 EGTGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 68
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------D 127
S+T KWRGKP+FIR+RT +E++ ++ L+DP A + +
Sbjct: 69 MSLTVKWRGKPIFIRNRTPEEVEAANAVQLADLKDPIARNANLPVDAQATGVDRSGGKGK 128
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 129 ENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPENLAIPTFSF 186
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 12 EGTGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 68
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 69 MSLTVKWRGKPIFIRNR 85
>gi|424871739|ref|ZP_18295401.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
gi|393167440|gb|EJC67487.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. viciae WSM1455]
Length = 192
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 107/178 (60%), Gaps = 18/178 (10%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 82
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGTGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------D 127
S+T KWRGKP+FIR+RT +E++ ++ L+DP A + +
Sbjct: 66 MSLTVKWRGKPIFIRNRTPEEVEAANAVQLADLKDPIARNANLPVDAQATGVDRSGGKGK 125
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
+W+V+IG CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 126 ENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPENLAIPTFSF 183
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEG 275
+G E R+ F Y+ + + G V A +V FI M A LA+A+IEVD+ + G
Sbjct: 9 EGTGEPTRRDFLYLT---TGMAGAVGAVAVAWPFIDQMRPDASTLALASIEVDVASLEPG 65
Query: 276 QSVTFKWRGKPLFIRHR 292
S+T KWRGKP+FIR+R
Sbjct: 66 MSLTVKWRGKPIFIRNR 82
>gi|424885439|ref|ZP_18309050.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|424896245|ref|ZP_18319819.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
gi|393177201|gb|EJC77242.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2012]
gi|393180472|gb|EJC80511.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2297]
Length = 192
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + ++ L
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVPLADL 98
Query: 116 RDPQA--------------DSDRVKD-PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V+IG CTHLGCVP+ AG++ G++CPCHG
Sbjct: 99 KDPVARNANLPPEAQATGVDRSGGKDKENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNR 82
>gi|86358640|ref|YP_470532.1| ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein
[Rhizobium etli CFN 42]
gi|86282742|gb|ABC91805.1| ubiquinol-cytochrome-c reductase, iron-sulfur subunit protein
[Rhizobium etli CFN 42]
Length = 192
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + ++ L
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVPLADL 98
Query: 116 RDPQA--------------DSDRVKD-PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V+IG CTHLGCVP+ AG++ G++CPCHG
Sbjct: 99 KDPIARNANLPPEAQATGVDRSGGKDKENWIVMIGTCTHLGCVPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 39 FIDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNR 82
>gi|319781871|ref|YP_004141347.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167759|gb|ADV11297.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 186
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 98/152 (64%), Gaps = 15/152 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+RT++E+ + ++ L
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEQEMKDGEAVKLADL 93
Query: 116 RDPQA------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D++R +W+V++ +CTHLGC+P+ GD+GG++CPCHGS
Sbjct: 94 KDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD +GRIRKGPAP NM VP ++F D ILI
Sbjct: 154 QYDTAGRIRKGPAPENMAVPVFKFISDTKILI 185
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+R
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNR 77
>gi|395779597|ref|ZP_10460066.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
washoensis 085-0475]
gi|395419972|gb|EJF86257.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
washoensis 085-0475]
Length = 182
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 107/180 (59%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ G V G+ +V+ FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTG---VAGVFSVGAVMWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS---------------WL 131
KWRG+P+ IR+RT +EI + T +S L+D +A + ++ + WL
Sbjct: 60 VKWRGQPVVIRNRTAQEIAEARATELSVLKDRKARNPNLEGEAEATDFARSAGEGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+ I +CTHLGCV + +G GG+ CPCHGS YD +GR+R GPA N+ +PPY+F + +L
Sbjct: 120 IFINLCTHLGCVTLGQSGRLGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYRFLSDTLL 179
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ G V G+ +V+ FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTG---VAGVFSVGAVMWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ IR+R
Sbjct: 60 VKWRGQPVVIRNR 72
>gi|333755255|gb|AEF97436.1| Rieske iron-sulfur protein [Boreus coloradensis]
Length = 82
Score = 145 bits (367), Expect = 2e-32, Method: Composition-based stats.
Identities = 59/81 (72%), Positives = 70/81 (86%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG++VTFKWRGKPLFIRHR+ EI+ E+N + LRDPQ DS+RV+ WLV+IG+CT
Sbjct: 2 IPEGKNVTFKWRGKPLFIRHRSAAEIEQEENVPLDILRDPQTDSERVQKSQWLVVIGVCT 61
Query: 139 HLGCVPIANAGDWGGYYCPCH 159
HLGCVPIANAGD+GGYYCPCH
Sbjct: 62 HLGCVPIANAGDYGGYYCPCH 82
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG++VTFKWRGKPLFIRHR
Sbjct: 2 IPEGKNVTFKWRGKPLFIRHR 22
>gi|218673379|ref|ZP_03523048.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
etli GR56]
Length = 192
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 18/174 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVASLEPGMSLT 69
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRGKP+FIR+RT +E+ + + L+DP A + + +W+
Sbjct: 70 VKWRGKPIFIRNRTPEEVKAAADVPLGDLKDPVARNANLPADAQATGVDRSGGEGKENWI 129
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
V++G CTHLGCVP+ AG++ G++CPCHGS YD +GRIRKGPAP N+ +P + F
Sbjct: 130 VMVGTCTHLGCVPLGQAGEYNGWFCPCHGSVYDTAGRIRKGPAPENLAIPTFSF 183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + G V A +V FI M A LA+A+IEVD+ + G S+T
Sbjct: 13 EPTRRDFLYLTTG---MAGAVGAAAVAWPFIDQMRPDASTLALASIEVDVASLEPGMSLT 69
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 70 VKWRGKPIFIRNR 82
>gi|209550357|ref|YP_002282274.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424918696|ref|ZP_18342060.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
gi|209536113|gb|ACI56048.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392854872|gb|EJB07393.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhizobium
leguminosarum bv. trifolii WSM597]
Length = 192
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + ++ L
Sbjct: 39 FVDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVPLADL 98
Query: 116 RDPQA--------------DSDRVKD-PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V++G CTHLGCVP+ AG++ G++CPCHG
Sbjct: 99 KDPVARNANLPPEAQATGVDRSGGKDKENWIVMVGTCTHLGCVPLGQAGEYNGWFCPCHG 158
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 159 SVYDTAGRIRKGPAPQNLAIPTFSF 183
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 39 FVDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNR 82
>gi|357026113|ref|ZP_09088221.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium amorphae CCNWGS0123]
gi|355542077|gb|EHH11245.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium amorphae CCNWGS0123]
Length = 186
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 100/152 (65%), Gaps = 15/152 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+RT++E+ + N+++L
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNRTEQEMKDGEAVNLAEL 93
Query: 116 RDPQA------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGS 161
+DP A D++R +W+V++ +CTHLGC+P+ G++GG++CPCHGS
Sbjct: 94 KDPIARNANLPADAPATDANRTTPGKEAWMVMVQVCTHLGCIPLGQEGEFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQF-GDEGILI 192
YD +GRIR+GPAP NM VP ++F D ILI
Sbjct: 154 VYDTAGRIRQGPAPENMAVPVFKFISDTKILI 185
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI M A LA+A++EVD+ + G S+ KWRGKP+ +R+R
Sbjct: 34 FIDQMRPDASTLALASVEVDVASLTPGMSLIVKWRGKPVVVRNR 77
>gi|146278836|ref|YP_001168995.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|145557077|gb|ABP71690.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17025]
Length = 187
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 99/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ + +SQL
Sbjct: 34 LINQMNPSADVQALASIFVDVSAVDPGVQLTVKFLGKPIFIRRRTEVDIEAARAVQLSQL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIANA-GDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGCVPI A GD+GG++CPCHG
Sbjct: 94 PDQSARNANIEGGADASDQNRTLDEAGEWLVMWGVCTHLGCVPIGGASGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P QF DE
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAQFIDE 181
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LINQMNPSADVQALASIFVDVSAVDPGVQLTVKFLGKPIFIRRR 77
>gi|85703943|ref|ZP_01035046.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. 217]
gi|85671263|gb|EAQ26121.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseovarius
sp. 217]
Length = 186
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 100/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ K+ GKP+FIR RT+KEI+ + +++L
Sbjct: 34 LVNQMNPSADVQALSSIRVDVSGVEPGTQISVKFLGKPVFIRRRTEKEIEAARAVELTEL 93
Query: 116 RDPQA-----------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D A D +R D + WLV+IG+CTHLGCVPI + +GD+GG++CPCHGS
Sbjct: 94 PDQNAQNRNDMALDASDQNRTLDEAGEWLVMIGVCTHLGCVPIGDGSGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+ +P F DE
Sbjct: 154 HYDTAGRIRKGPAPENLWIPVASFIDE 180
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ K+ GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSIRVDVSGVEPGTQISVKFLGKPVFIRRR 77
>gi|89067287|ref|ZP_01154800.1| Ubiquinol-cytochrome C reductase, iron-sulfur protein [Oceanicola
granulosus HTCC2516]
gi|89046856|gb|EAR52910.1| Ubiquinol-cytochrome C reductase, iron-sulfur protein [Oceanicola
granulosus HTCC2516]
Length = 197
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 99/161 (61%), Gaps = 25/161 (15%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEID--TEQNTNIS 113
++ M+ SADV A+A+I VD++ I G +T W+GKP+FIRHRT+ EI EQ+ +
Sbjct: 34 LVNQMNPSADVQALASIRVDVSSIQPGSQLTVLWQGKPVFIRHRTEAEIAIAAEQDLEVE 93
Query: 114 QLRDPQA------------DSDRV----------KDPSWLVIIGICTHLGCVPIAN-AGD 150
+ DP A D +R +WLV +G+CTHLGCVP+ N AGD
Sbjct: 94 TMPDPLARNANIDGTALATDENRAMPVPEGAEGATPRAWLVQMGVCTHLGCVPLGNQAGD 153
Query: 151 WGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+GG++CPCHGSHYDASGRIR+GPAP N+ VP + D L
Sbjct: 154 FGGWFCPCHGSHYDASGRIRRGPAPENLPVPVTAWADASTL 194
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+A+I VD++ I G +T W+GKP+FIRHR
Sbjct: 34 LVNQMNPSADVQALASIRVDVSSIQPGSQLTVLWQGKPVFIRHR 77
>gi|159045818|ref|YP_001534612.1| ubiquinol-cytochrome c reductase [Dinoroseobacter shibae DFL 12]
gi|157913578|gb|ABV95011.1| ubiquinol-cytochrome c reductase [Dinoroseobacter shibae DFL 12]
Length = 185
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 98/146 (67%), Gaps = 13/146 (8%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD+ + EG ++ + GKP+FIR RT EI+ ++ ++ L
Sbjct: 34 LVNQMNPSADVQALSSILVDIGEVAEGTQISVMFLGKPVFIRRRTAAEIEDARSVSLDDL 93
Query: 116 RDPQA-----------DSDRV--KDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSH 162
DP A D +R ++ WL++ G+CTHLGCVP+ +AGD+GG++CPCHGSH
Sbjct: 94 PDPVARNENNEGAPATDENRSYGENGEWLIMQGVCTHLGCVPLGDAGDFGGWFCPCHGSH 153
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDE 188
YD SGRIR+GPAP N+ VP +F DE
Sbjct: 154 YDTSGRIRRGPAPENLPVPLVEFIDE 179
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD+ + EG ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSILVDIGEVAEGTQISVMFLGKPVFIRRR 77
>gi|423712331|ref|ZP_17686633.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
washoensis Sb944nv]
gi|395412205|gb|EJF78714.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
washoensis Sb944nv]
Length = 182
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 107/180 (59%), Gaps = 18/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ G + G+ +V+ FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTG---IAGVFSVGAVMWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK---------------DPSWL 131
KWRG+P+ IR+RT +EI + T +S L+D +A + ++ +WL
Sbjct: 60 VKWRGQPVVIRNRTAQEIAEARATELSVLKDRKARNPNLEVEAEATDFARSAGEGRENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+ I +CTHLGCV + +G GG+ CPCHGS YD +GR+R GPA N+ +PPY+F + +L
Sbjct: 120 IFINLCTHLGCVTLDQSGRLGGWLCPCHGSVYDTAGRVRSGPANYNLAIPPYRFLSDTLL 179
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ G + G+ +V+ FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLVTG---IAGVFSVGAVMWPFIRQLRPDEAVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ IR+R
Sbjct: 60 VKWRGQPVVIRNR 72
>gi|89052816|ref|YP_508267.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Jannaschia
sp. CCS1]
gi|88862365|gb|ABD53242.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Jannaschia
sp. CCS1]
Length = 191
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 105/182 (57%), Gaps = 22/182 (12%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y G+ G+V A + ++SM+ SADV A + + VD+ + G +T +
Sbjct: 11 RRDFLYYATAGT---GVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPGTQLTVLF 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQA------------------DSDRVKDPSWL 131
GKP+FIR RT+ EI+ + +S+L D A SD WL
Sbjct: 68 LGKPIFIRRRTEDEIEAGRAVEVSELIDANARNANDESADAADINRTLTTSDGENSGEWL 127
Query: 132 VIIGICTHLGCVPIA-NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGI 190
V+ G+CTHLGCVPI AGD+GG++CPCHGSHYD +GRIR+GPAP N+ +P +F D+
Sbjct: 128 VMQGVCTHLGCVPIGEGAGDFGGWFCPCHGSHYDTAGRIRRGPAPENLPIPAAEFIDDST 187
Query: 191 LI 192
++
Sbjct: 188 IL 189
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y G+ G+V A + ++SM+ SADV A + + VD+ + G +T +
Sbjct: 11 RRDFLYYATAGT---GVVVAGAAAWPLVNSMNPSADVQAASQLRVDVGGVEPGTQLTVLF 67
Query: 283 RGKPLFIRHR 292
GKP+FIR R
Sbjct: 68 LGKPIFIRRR 77
>gi|126727295|ref|ZP_01743131.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium HTCC2150]
gi|126703504|gb|EBA02601.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium HTCC2150]
Length = 186
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 98/146 (67%), Gaps = 14/146 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G +T K+ GKP+FIR RT+ EI + ++ L
Sbjct: 34 LVNQMNPSADVQALSSIRVDVSGVEPGTQLTVKYLGKPVFIRRRTEAEIADAKAVELADL 93
Query: 116 RD-----------PQADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D +D++R D + WLV+IG+CTHLGCVPI N AGD+GG++CPCHGS
Sbjct: 94 IDQGSENSNKPDTDASDANRSLDEAGEWLVMIGVCTHLGCVPIGNEAGDFGGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGD 187
HYD SGRIRKGPAP N+ VP +F D
Sbjct: 154 HYDTSGRIRKGPAPRNLPVPVAEFVD 179
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSIRVDVSGVEPGTQLTVKYLGKPVFIRRR 77
>gi|333755249|gb|AEF97433.1| Rieske iron-sulfur protein [Psychodidae sp. AG-2011]
Length = 79
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 61/78 (78%), Positives = 70/78 (89%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG+SVTFKWRGKPLFIRHRT +EI TEQ+ +S LRDPQADSDR + P WLV++G+CT
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHRTAEEISTEQSVAVSSLRDPQADSDRTQRPEWLVVLGVCT 61
Query: 139 HLGCVPIANAGDWGGYYC 156
HLGCVPIANAGD+GGYYC
Sbjct: 62 HLGCVPIANAGDFGGYYC 79
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG+SVTFKWRGKPLFIRHR
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHR 22
>gi|83955836|ref|ZP_00964378.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83839841|gb|EAP79018.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 185
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 108/182 (59%), Gaps = 18/182 (9%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
Q R+ F Y G+ G V + V ++ M+ SADV A++ I VD++ + G
Sbjct: 4 QTPQLRRDFLYYATAGT---GAVAVGAAVWPLLNQMNPSADVRALSQIRVDISGVEPGTQ 60
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQL-----RDPQADSDRVK---------DPSW 130
+T + GKP+FIRHRT EI ++ ++ L R+P D + + ++
Sbjct: 61 LTVSFLGKPVFIRHRTDAEIAQARSEDVLSLPDTVARNPNISGDDLATDANRAVAGNENF 120
Query: 131 LVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
LV+IG+CTHLGCVP+ + AGD+GG++CPCHGSHYD +GRIRKGPAP N+ +P ++
Sbjct: 121 LVMIGVCTHLGCVPLGDGAGDFGGWFCPCHGSHYDTAGRIRKGPAPENLHIPTMSVSEDM 180
Query: 190 IL 191
IL
Sbjct: 181 IL 182
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
Q R+ F Y G+ G V + V ++ M+ SADV A++ I VD++ + G
Sbjct: 4 QTPQLRRDFLYYATAGT---GAVAVGAAVWPLLNQMNPSADVRALSQIRVDISGVEPGTQ 60
Query: 278 VTFKWRGKPLFIRHR 292
+T + GKP+FIRHR
Sbjct: 61 LTVSFLGKPVFIRHR 75
>gi|333755253|gb|AEF97435.1| Rieske iron-sulfur protein [Panorpa helena]
Length = 79
Score = 142 bits (358), Expect = 2e-31, Method: Composition-based stats.
Identities = 60/78 (76%), Positives = 69/78 (88%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG+SVTFKWRGKPLFIRHRT KEI+TE+ +S LRD +AD DRV+ P WLV+IG+CT
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHRTGKEIETEKAVPLSALRDAEADEDRVQKPEWLVVIGVCT 61
Query: 139 HLGCVPIANAGDWGGYYC 156
HLGCVPIANAGD+GGYYC
Sbjct: 62 HLGCVPIANAGDFGGYYC 79
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG+SVTFKWRGKPLFIRHR
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHR 22
>gi|443921182|gb|ELU40917.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizoctonia
solani AG-1 IA]
Length = 372
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 6 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 65
DI PDFS YR + +E+ R A +Y + G V+ AKS V F++SMSASAD
Sbjct: 187 DINVPDFSPYRAN------SDESNR-ALSYFMIGSLGVLSATAAKSTVTDFLASMSASAD 239
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
VLA+A +EVD+N IPEG++V KWRGKP+FIRHRTQ EI+ + ++ LRDP++DSDR
Sbjct: 240 VLALAKVEVDMNAIPEGKNVIVKWRGKPVFIRHRTQDEINEANSIDVKSLRDPESDSDRA 299
Query: 126 KDPSWLVIIGI 136
K P WLVI I
Sbjct: 300 KKPEWLVIAVI 310
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 64/94 (68%), Gaps = 7/94 (7%)
Query: 199 DIRTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASAD 258
DI PDFS YR + +E+ R A +Y + G V+ AKS V F++SMSASAD
Sbjct: 187 DINVPDFSPYRAN------SDESNR-ALSYFMIGSLGVLSATAAKSTVTDFLASMSASAD 239
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
VLA+A +EVD+N IPEG++V KWRGKP+FIRHR
Sbjct: 240 VLALAKVEVDMNAIPEGKNVIVKWRGKPVFIRHR 273
>gi|114798737|ref|YP_759080.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Hyphomonas
neptunium ATCC 15444]
gi|114738911|gb|ABI77036.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Hyphomonas
neptunium ATCC 15444]
Length = 187
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 109/177 (61%), Gaps = 16/177 (9%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVC-AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 85
+ R+ F ++ G ++ G A ++V+Q+ + +AD A + ++VD++ +P G +
Sbjct: 11 DEDRRNFIHIATGSVALGGAAMFAWTLVDQW----NPAADTRAASALDVDVSKVPLGGEI 66
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK-------DPSWLVIIGICT 138
GKP F+RHRT EI ++ N+S L DP+ D R++ + + LV G CT
Sbjct: 67 RILIGGKPFFVRHRTPSEISAAESVNVSILPDPETDEARLRPKADGSLNKAILVTSGSCT 126
Query: 139 HLGCVPIA----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
HLGCVP+ N GD+GG+YCPCHGSHYD SGRIRKGPAP+N+ VP Y++ + ++
Sbjct: 127 HLGCVPVGPSQGNTGDYGGWYCPCHGSHYDTSGRIRKGPAPSNLPVPNYRWVSDSVV 183
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVC-AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSV 278
+ R+ F ++ G ++ G A ++V+Q+ + +AD A + ++VD++ +P G +
Sbjct: 11 DEDRRNFIHIATGSVALGGAAMFAWTLVDQW----NPAADTRAASALDVDVSKVPLGGEI 66
Query: 279 TFKWRGKPLFIRHR 292
GKP F+RHR
Sbjct: 67 RILIGGKPFFVRHR 80
>gi|77464972|ref|YP_354476.1| ubiquinol-cytochrome C reductase, iron-sulfur protein [Rhodobacter
sphaeroides 2.4.1]
gi|126460841|ref|YP_001041955.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|332559871|ref|ZP_08414193.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides WS8N]
gi|429207543|ref|ZP_19198802.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodobacter
sp. AKP1]
gi|464995|sp|Q02762.1|UCRI_RHOSH RecName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit;
AltName: Full=Rieske iron-sulfur protein; Short=RISP
gi|581533|emb|CAA39623.1| ubiquinol-cytochrome c reductase [Rhodobacter sphaeroides GA]
gi|77389390|gb|ABA80575.1| Ubiquinol-cytochrome C reductase, iron-sulfur protein [Rhodobacter
sphaeroides 2.4.1]
gi|126102505|gb|ABN75183.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|332277583|gb|EGJ22898.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rhodobacter
sphaeroides WS8N]
gi|428189918|gb|EKX58471.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Rhodobacter
sp. AKP1]
Length = 187
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG
Sbjct: 94 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P +F DE
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAKFIDE 181
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 77
>gi|163930992|pdb|2QJP|C Chain C, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
gi|163930995|pdb|2QJP|F Chain F, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
gi|163930998|pdb|2QJP|I Chain I, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
gi|163931001|pdb|2QJP|L Chain L, Crystal Structure Of Wild Type Rhodobacter Sphaeroides
With Stigmatellin And Antimycin Inhibited
Length = 179
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL
Sbjct: 26 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 85
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG
Sbjct: 86 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHG 145
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P +F DE
Sbjct: 146 SHYDSAGRIRKGPAPENLPIPLAKFIDE 173
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 26 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 69
>gi|126728149|ref|ZP_01743965.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sagittula
stellata E-37]
gi|126711114|gb|EBA10164.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Sagittula
stellata E-37]
Length = 200
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 101/166 (60%), Gaps = 30/166 (18%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQ------- 108
++ M+ SADV A++TI VD++ + G +T KW GKP+FIRHRT E++ +
Sbjct: 34 LVNQMNPSADVRALSTIRVDVSGVAPGSQLTVKWLGKPVFIRHRTPDEVEKAKLQDEALA 93
Query: 109 NTNISQLRDPQADSDRVKDP----------------------SWLVIIGICTHLGCVPIA 146
+ + S L D A +D + DP +WLV +G+CTHLGCVP+
Sbjct: 94 DGSASPLVDTLARNDNI-DPNAPATDENRTMPNPEGSDEVAETWLVQMGVCTHLGCVPLG 152
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
++GD+GG++CPCHGSHYD +GRIRKGPAP N+ +PP + D ++
Sbjct: 153 DSGDFGGWFCPCHGSHYDMAGRIRKGPAPQNLHIPPTSWVDASTIL 198
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A++TI VD++ + G +T KW GKP+FIRHR
Sbjct: 34 LVNQMNPSADVRALSTIRVDVSGVAPGSQLTVKWLGKPVFIRHR 77
>gi|395778454|ref|ZP_10458966.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
elizabethae Re6043vi]
gi|423715235|ref|ZP_17689459.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
elizabethae F9251]
gi|395417662|gb|EJF83999.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
elizabethae Re6043vi]
gi|395430071|gb|EJF96122.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Bartonella
elizabethae F9251]
Length = 161
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 15/151 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI VLA +++EVDL+ I EG SVT KWRG+P+ IR+RT KEI + T++S L
Sbjct: 8 FIRQFRPDEAVLASSSVEVDLSGIEEGMSVTVKWRGQPVVIRNRTAKEIADARATSLSFL 67
Query: 116 RDPQADSDRVKDP---------------SWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+D QA + ++ +WL++I +CTHLGCV + +G +GG+ CPCHG
Sbjct: 68 KDRQARNPNLEGEKEATDFARSAGKGRENWLIVINLCTHLGCVTLGQSGKFGGWLCPCHG 127
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
S YD +GR+R GPA N+ +PPYQF + +L
Sbjct: 128 SVYDTAGRVRSGPANYNLAIPPYQFLSDTLL 158
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI VLA +++EVDL+ I EG SVT KWRG+P+ IR+R
Sbjct: 8 FIRQFRPDEAVLASSSVEVDLSGIEEGMSVTVKWRGQPVVIRNR 51
>gi|333755421|gb|AEF97519.1| Rieske iron-sulfur protein [Tipula oleracea]
Length = 81
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 58/80 (72%), Positives = 70/80 (87%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG+SVTFKWRGKPLFIRHRT +EI TE++ ++ LRDPQ D +RV+ WLV++G+CT
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHRTGEEIATEESVPVASLRDPQHDKERVQRSEWLVVLGVCT 61
Query: 139 HLGCVPIANAGDWGGYYCPC 158
HLGCVPIANAGD+GGYYCPC
Sbjct: 62 HLGCVPIANAGDFGGYYCPC 81
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 20/21 (95%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG+SVTFKWRGKPLFIRHR
Sbjct: 2 IPEGKSVTFKWRGKPLFIRHR 22
>gi|254465700|ref|ZP_05079111.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium Y4I]
gi|206686608|gb|EDZ47090.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacterales bacterium Y4I]
Length = 149
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 98/142 (69%), Gaps = 14/142 (9%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ+EI+ + +S+L DP+
Sbjct: 1 MNPSADVKALSSILVDVSGVEVGTQISVMFLGKPVFIRRRTQEEIEAAREVELSELIDPR 60
Query: 120 -----------ADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDA 165
AD +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGSHYD
Sbjct: 61 SENANKPGTDAADVNRTLDETGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGSHYDT 120
Query: 166 SGRIRKGPAPTNMEVPPYQFGD 187
+GRIRKGPAP N+ +P +F D
Sbjct: 121 AGRIRKGPAPENLHIPLAEFTD 142
>gi|254513135|ref|ZP_05125201.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacteraceae bacterium KLH11]
gi|221533134|gb|EEE36129.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodobacteraceae bacterium KLH11]
Length = 157
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 97/150 (64%), Gaps = 22/150 (14%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN---ISQLR 116
M+ SADV A+++I D++ + G +T KW GKP+FIRHRT EI Q + + L
Sbjct: 1 MNPSADVQALSSIRQDVSGVEPGTQLTVKWLGKPVFIRHRTGAEIQEAQQQDAEGVDALP 60
Query: 117 DPQA------------DSDRV-KDP------SWLVIIGICTHLGCVPIANAGDWGGYYCP 157
DP A D++RV P +W+V +G+CTHLGCVP+ +AGD+GG++CP
Sbjct: 61 DPLARNANLKPDAPATDANRVLPSPEGEAAGAWIVQMGVCTHLGCVPLGDAGDFGGWFCP 120
Query: 158 CHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
CHGSHYD +GRIRKGPAP N+ +PP ++ D
Sbjct: 121 CHGSHYDLAGRIRKGPAPENLPIPPVEWVD 150
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ SADV A+++I D++ + G +T KW GKP+FIRHR
Sbjct: 1 MNPSADVQALSSIRQDVSGVEPGTQLTVKWLGKPVFIRHR 40
>gi|83859584|ref|ZP_00953104.1| probable ubiquinol-cytochrome c reductase iron-sulfur
subunitprotein [Oceanicaulis sp. HTCC2633]
gi|83851943|gb|EAP89797.1| probable ubiquinol-cytochrome c reductase iron-sulfur
subunitprotein [Oceanicaulis sp. HTCC2633]
Length = 205
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 103/195 (52%), Gaps = 30/195 (15%)
Query: 18 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 77
+ NP+ G EE R+ F Y+ + G+ VG + FI M+ +AD LA++T E+++
Sbjct: 5 NSNPETGGEEPSRRDFLYIASVGAVGVG---GALTLWPFIDQMNPAADTLALSTTEINIG 61
Query: 78 LIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS-------- 129
+ EG +T +R +P F+R RT +EI +S+L DP A + + D +
Sbjct: 62 ELEEGAEITVMFRERPHFVRRRTAQEISEAAEVEVSRLPDPLARNANLDDSAPATDANRS 121
Query: 130 -------------------WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIR 170
LV CTHLGCVP AGD+ ++CPCHGSHYD +GRIR
Sbjct: 122 TLSAGVDEGVEVDEALRGAMLVTSANCTHLGCVPTEGAGDYDAWFCPCHGSHYDTAGRIR 181
Query: 171 KGPAPTNMEVPPYQF 185
+GPAP N+ +PP F
Sbjct: 182 RGPAPENLPIPPMTF 196
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 211 DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLN 270
+ NP+ G EE R+ F Y+ + G+ VG + FI M+ +AD LA++T E+++
Sbjct: 5 NSNPETGGEEPSRRDFLYIASVGAVGVG---GALTLWPFIDQMNPAADTLALSTTEINIG 61
Query: 271 LIPEGQSVTFKWRGKPLFIRHR 292
+ EG +T +R +P F+R R
Sbjct: 62 ELEEGAEITVMFRERPHFVRRR 83
>gi|333755395|gb|AEF97506.1| Rieske iron-sulfur protein [Drosophila elegans]
Length = 74
Score = 140 bits (353), Expect = 6e-31, Method: Composition-based stats.
Identities = 57/71 (80%), Positives = 63/71 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP++D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPESDDQRVVKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPY 183
PAP N+EVP +
Sbjct: 64 PAPLNLEVPTH 74
>gi|393719183|ref|ZP_10339110.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sphingomonas
echinoides ATCC 14820]
Length = 190
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 89/136 (65%), Gaps = 6/136 (4%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADVLA +T +VDL+ I GQ + +R +PLF+R+ T EI ++ L
Sbjct: 46 LINQMNPSADVLAQSTTDVDLSKIEAGQGIVTSFRKQPLFVRNLTPAEIAAADKVDVKTL 105
Query: 116 RDPQADSDRVK-DPSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGRI 169
RDP+ + R + +WL+ +G+CTHLGC+P + G +GGY+CPCHGS YD + RI
Sbjct: 106 RDPETLAQRTRGQKNWLITLGVCTHLGCIPQGITSGEDRGQFGGYFCPCHGSQYDTAARI 165
Query: 170 RKGPAPTNMEVPPYQF 185
RKGPAP N+ VP Y+F
Sbjct: 166 RKGPAPKNLFVPEYKF 181
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
I+ M+ SADVLA +T +VDL+ I GQ + +R +PLF+R+
Sbjct: 46 LINQMNPSADVLAQSTTDVDLSKIEAGQGIVTSFRKQPLFVRN 88
>gi|84503496|ref|ZP_01001551.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oceanicola
batsensis HTCC2597]
gi|84388174|gb|EAQ01127.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Oceanicola
batsensis HTCC2597]
Length = 192
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 102/158 (64%), Gaps = 22/158 (13%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ +ADV A+A I VD++ + G +T K+ GKP+FIR RT+ EI+ + ++S L
Sbjct: 34 LVNQMNPTADVQALAQIRVDVSGLEPGTQLTVKFLGKPVFIRRRTEAEIEEARQVDVSTL 93
Query: 116 RDPQA------DSDRVKDPS--------------WLVIIGICTHLGCVPIAN-AGDWGGY 154
DP+A + DP+ WLV++G+CTHLGCVP+ + AGD+GG+
Sbjct: 94 PDPEARNANLPEGTPATDPNRALPLNEGDGASEEWLVMMGVCTHLGCVPLGDGAGDFGGW 153
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQF-GDEGIL 191
+CPCHGSHYD +GRIR+GPAP N+ +P +F G E +L
Sbjct: 154 FCPCHGSHYDTAGRIRRGPAPENLPIPVARFEGSEIVL 191
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ +ADV A+A I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LVNQMNPTADVQALAQIRVDVSGLEPGTQLTVKFLGKPVFIRRR 77
>gi|221640893|ref|YP_002527155.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodobacter
sphaeroides KD131]
gi|221161674|gb|ACM02654.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhodobacter
sphaeroides KD131]
Length = 150
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 97/144 (67%), Gaps = 15/144 (10%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D
Sbjct: 1 MNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTN 60
Query: 120 A------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYD 164
A D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHGSHYD
Sbjct: 61 ARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYD 120
Query: 165 ASGRIRKGPAPTNMEVPPYQFGDE 188
++GRIRKGPAP N+ +P +F DE
Sbjct: 121 SAGRIRKGPAPENLPIPLAKFIDE 144
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 1 MNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 40
>gi|114793885|pdb|2FYN|C Chain C, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|114793888|pdb|2FYN|F Chain F, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|114793891|pdb|2FYN|I Chain I, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|114793894|pdb|2FYN|L Chain L, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|114793897|pdb|2FYN|O Chain O, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|114793900|pdb|2FYN|R Chain R, Crystal Structure Analysis Of The Double Mutant
Rhodobacter Sphaeroides Bc1 Complex
gi|163931004|pdb|2QJY|C Chain C, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
gi|163931007|pdb|2QJY|F Chain F, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
gi|163931010|pdb|2QJY|I Chain I, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
gi|163931013|pdb|2QJY|L Chain L, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
gi|163931016|pdb|2QJY|O Chain O, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
gi|163931019|pdb|2QJY|R Chain R, Crystal Structure Of Rhodobacter Sphaeroides Double Mutant
With Stigmatellin And Uq2
Length = 187
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGC PI +GD+GG++CPCHG
Sbjct: 94 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P +F DE
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAKFIDE 181
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 77
>gi|333755403|gb|AEF97510.1| Rieske iron-sulfur protein [Drosophila suzukii]
Length = 72
Score = 140 bits (352), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/69 (82%), Positives = 61/69 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPETDDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVP 181
PAP N+EVP
Sbjct: 64 PAPLNLEVP 72
>gi|163930974|pdb|2QJK|C Chain C, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
gi|163930977|pdb|2QJK|F Chain F, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
gi|163930980|pdb|2QJK|I Chain I, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
gi|163930983|pdb|2QJK|L Chain L, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
gi|163930986|pdb|2QJK|O Chain O, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
gi|163930989|pdb|2QJK|R Chain R, Crystal Structure Analysis Of Mutant Rhodobacter
Sphaeroides Bc1 With Stigmatellin And Antimycin
Length = 179
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 98/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL
Sbjct: 26 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 85
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGC PI +GD+GG++CPCHG
Sbjct: 86 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCSPIGGVSGDFGGWFCPCHG 145
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P +F DE
Sbjct: 146 SHYDSAGRIRKGPAPENLPIPLAKFIDE 173
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 26 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 69
>gi|148907434|gb|ABR16850.1| unknown [Picea sitchensis]
Length = 245
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
++AFTY + G V + +V +FI SMSAS DVLAMA++EVDL+ I G +VT K
Sbjct: 111 SKRAFTYFVLTGGRFVYASFIRLMVLKFILSMSASKDVLAMASLEVDLSNIEAGSTVTVK 170
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANA 148
WRGKP+FIR RT+ +I + N++ LRDPQ DS RV +P WLV++G+CTHLGCVP+
Sbjct: 171 WRGKPVFIRRRTEDDIQLANSVNVNSLRDPQEDSARVLNPEWLVVVGVCTHLGCVPLPKC 230
Query: 149 GDWGGY 154
WG +
Sbjct: 231 --WGLW 234
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
++AFTY + G V + +V +FI SMSAS DVLAMA++EVDL+ I G +VT K
Sbjct: 111 SKRAFTYFVLTGGRFVYASFIRLMVLKFILSMSASKDVLAMASLEVDLSNIEAGSTVTVK 170
Query: 282 WRGKPLFIRHR 292
WRGKP+FIR R
Sbjct: 171 WRGKPVFIRRR 181
>gi|188581722|ref|YP_001925167.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium populi BJ001]
gi|179345220|gb|ACB80632.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium populi BJ001]
Length = 182
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++SM+ +A V A A +EVDL+ I +GQ V WRGK +F+R T+KEI + +S+
Sbjct: 33 FVASMAPDAATVAAGAPLEVDLSPIQDGQIVNVFWRGKLIFVRKLTEKEITDMKAVPLSE 92
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
+ DP RVK WLV G CTHLGCVPI ++G++ G+ CPCHGS +DA GR+R+G
Sbjct: 93 MIDPATFDSRVKKGHDQWLVSYGNCTHLGCVPIGHSGNYEGWSCPCHGSQFDAVGRVRRG 152
Query: 173 PAPTNMEVPPYQF 185
PAPTN+ +PPY F
Sbjct: 153 PAPTNLPIPPYAF 165
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
F++SM+ +A V A A +EVDL+ I +GQ V WRGK +F+R
Sbjct: 33 FVASMAPDAATVAAGAPLEVDLSPIQDGQIVNVFWRGKLIFVR 75
>gi|99082654|ref|YP_614808.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria sp.
TM1040]
gi|99038934|gb|ABF65546.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Ruegeria sp.
TM1040]
Length = 186
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 100/150 (66%), Gaps = 14/150 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ+EID + +++L
Sbjct: 34 LVNQMNPSADVQALSSILVDISGVDVGTQISVMFLGKPVFIRRRTQEEIDEARAVEMAEL 93
Query: 116 RDPQA-----------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D + D +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGS
Sbjct: 94 IDASSENPNKPGTDASDENRTLDENGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
HYD +GRIRKGPAP N+ +P +F DE +
Sbjct: 154 HYDTAGRIRKGPAPQNLHIPVAEFTDENTI 183
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSILVDISGVDVGTQISVMFLGKPVFIRRR 77
>gi|220927274|ref|YP_002502576.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium nodulans ORS 2060]
gi|219951881|gb|ACL62273.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium nodulans ORS 2060]
Length = 187
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 56 FISSMSASAD-VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++SM+ A+ V A A I+VDL+ I EGQ V WRGK +F+R + KEI + +S
Sbjct: 41 FVASMAPDAETVAAGAPIDVDLSPITEGQIVNVFWRGKLIFVRRLSGKEIADMKAVKLSD 100
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP RVK+ WLV G CTHLGCVPI + GD+ G+ CPCHGS +DA GR+R+G
Sbjct: 101 LLDPAPFQARVKEGHDQWLVTYGNCTHLGCVPIGHQGDFEGWACPCHGSQFDAVGRVRRG 160
Query: 173 PAPTNMEVPPYQF-GDEGILI 192
PAP N+ +PPY F GD + I
Sbjct: 161 PAPINLPIPPYAFQGDTKVRI 181
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 249 FISSMSASAD-VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
F++SM+ A+ V A A I+VDL+ I EGQ V WRGK +F+R
Sbjct: 41 FVASMAPDAETVAAGAPIDVDLSPITEGQIVNVFWRGKLIFVR 83
>gi|90423429|ref|YP_531799.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
gi|90105443|gb|ABD87480.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
Length = 178
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 88/133 (66%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAMA-TIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
++ ++ +A +A +EVDL + GQ + WRG+P+FI HRT +EI + QN +
Sbjct: 35 LVAQLNPNASTVAAGFPLEVDLAPLAVGQVIKVFWRGQPIFISHRTPQEIQSAQNADWKS 94
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
RDPQ DS+RVK WLV+ ICTHLGC+P + G++ G++C CHGS YD+SGR R G
Sbjct: 95 FRDPQPDSERVKAGHEQWLVVSAICTHLGCIPTEHQGNYDGWFCQCHGSQYDSSGRARLG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ + PY+F
Sbjct: 155 PAPLNLALVPYEF 167
>gi|402489047|ref|ZP_10835851.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium sp.
CCGE 510]
gi|401811994|gb|EJT04352.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Rhizobium sp.
CCGE 510]
Length = 167
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 93/145 (64%), Gaps = 15/145 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ M A LA+A+IEVD+ + G S+T KWRGKP+FIR+RT +E+ + ++ L
Sbjct: 14 FVDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNRTPEEVKAAADVALADL 73
Query: 116 RDPQA--------------DSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGYYCPCHG 160
+DP A D KD +W+V++G CTHLGCVP+ AG++ G+YCPCHG
Sbjct: 74 KDPIARNANLPPEAQATGVDRSGGKDKENWIVMVGTCTHLGCVPLGQAGEYNGWYCPCHG 133
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQF 185
S YD +GRIRKGPAP N+ +P + F
Sbjct: 134 SVYDTAGRIRKGPAPQNLAIPTFSF 158
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ M A LA+A+IEVD+ + G S+T KWRGKP+FIR+R
Sbjct: 14 FVDQMRPDASTLALASIEVDVASLEPGMSLTVKWRGKPIFIRNR 57
>gi|71655052|ref|XP_816135.1| reiske iron-sulfur protein precursor [Trypanosoma cruzi strain CL
Brener]
gi|70881241|gb|EAN94284.1| reiske iron-sulfur protein precursor, putative [Trypanosoma cruzi]
Length = 297
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 102/172 (59%), Gaps = 3/172 (1%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIP 80
K EE + +A A S+++G V A+ V + ++ IE ++ +
Sbjct: 121 KLPEELEDRARVTDYALNSALLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELE 180
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTH 139
+ Q T WRG+P+F+ R+ +++ Q T +S L+ P+AD R D V+I ICTH
Sbjct: 181 DRQCKTIVWRGRPVFVYKRSARQMKELQETPLSALKHPEADEARFPDHREKAVVIAICTH 240
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
LGC+PI N G + G++CPCHGSHYDASGR R+GPAP N+EVPPY++ D+ +
Sbjct: 241 LGCIPIPNEGLYNGFFCPCHGSHYDASGRTRQGPAPLNLEVPPYKWIDDNTI 292
>gi|418058161|ref|ZP_12696140.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium extorquens DSM 13060]
gi|373568276|gb|EHP94226.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium extorquens DSM 13060]
Length = 182
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 3/133 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++SM+ +A V A A ++VDL+ I +GQ V WRGK +F+R T+KE+ + +S+
Sbjct: 33 FVASMAPDAATVAAGAPLDVDLSPIQDGQIVNVFWRGKLIFVRKLTEKEVTDMKAVPLSE 92
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
+ DP A RVK WLV G CTHLGCVPI ++G++ G+ CPCHGS +DA GR+R+G
Sbjct: 93 MIDPAAFDTRVKQGHDQWLVSYGNCTHLGCVPIGHSGNYEGWSCPCHGSQFDAVGRVRRG 152
Query: 173 PAPTNMEVPPYQF 185
PAPTN+ +PPY F
Sbjct: 153 PAPTNLPIPPYAF 165
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
F++SM+ +A V A A ++VDL+ I +GQ V WRGK +F+R
Sbjct: 33 FVASMAPDAATVAAGAPLDVDLSPIQDGQIVNVFWRGKLIFVR 75
>gi|163851964|ref|YP_001640007.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium extorquens PA1]
gi|218530716|ref|YP_002421532.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Methylobacterium extorquens CM4]
gi|240139090|ref|YP_002963565.1| ubiquinol-cytochrome C reductase [Methylobacterium extorquens AM1]
gi|254561684|ref|YP_003068779.1| Ubiquinol-cytochrome C reductase complex, iron-sulfur subunit
[Methylobacterium extorquens DM4]
gi|163663569|gb|ABY30936.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium extorquens PA1]
gi|218523019|gb|ACK83604.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium extorquens CM4]
gi|240009062|gb|ACS40288.1| Ubiquinol-cytochrome c reductase complex, iron-sulfur subunit
(Rieske iron-sulfur protein) [Methylobacterium
extorquens AM1]
gi|254268962|emb|CAX24923.1| Ubiquinol-cytochrome c reductase complex, iron-sulfur subunit
(Rieske iron-sulfur protein) [Methylobacterium
extorquens DM4]
Length = 182
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 92/133 (69%), Gaps = 3/133 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++SM+ +A V A A ++VDL+ I +GQ V WRGK +F+R T+KE+ + +S+
Sbjct: 33 FVASMAPDAATVAAGAPLDVDLSPIQDGQIVNVFWRGKLIFVRKLTEKEVTDMKAVPLSE 92
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
+ DP A RVK WLV G CTHLGCVPI ++G++ G+ CPCHGS +DA GR+R+G
Sbjct: 93 MIDPAAFDTRVKKGHDQWLVSYGNCTHLGCVPIGHSGNYEGWSCPCHGSQFDAVGRVRRG 152
Query: 173 PAPTNMEVPPYQF 185
PAPTN+ +PPY F
Sbjct: 153 PAPTNLPIPPYAF 165
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
F++SM+ +A V A A ++VDL+ I +GQ V WRGK +F+R
Sbjct: 33 FVASMAPDAATVAAGAPLDVDLSPIQDGQIVNVFWRGKLIFVR 75
>gi|259417802|ref|ZP_05741721.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Silicibacter
sp. TrichCH4B]
gi|259346708|gb|EEW58522.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit [Silicibacter
sp. TrichCH4B]
Length = 186
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 98/147 (66%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ+EID + + +L
Sbjct: 34 LVNQMNPSADVQALSSILVDISGVDVGTQISVMFLGKPVFIRRRTQEEIDEARAVEMQEL 93
Query: 116 RDPQA-----------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D + D +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGS
Sbjct: 94 IDSSSENPNKPGTDASDENRTLDENGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+ +P +F DE
Sbjct: 154 HYDTAGRIRKGPAPQNLHIPVAEFTDE 180
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSILVDISGVDVGTQISVMFLGKPVFIRRR 77
>gi|170746897|ref|YP_001753157.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium radiotolerans JCM 2831]
gi|170653419|gb|ACB22474.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium radiotolerans JCM 2831]
Length = 189
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Query: 53 VNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
V ISSM+ AD +A A IEVDL I +GQ V WRGK +F+R T KE+ +
Sbjct: 38 VWPLISSMAPDADTIAAGAPIEVDLTPIQDGQIVNVFWRGKLIFVRKLTAKEVADMKAVP 97
Query: 112 ISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRI 169
+S + DP A RVK WLV+ G CTHLGCVPI + G++ G+ CPCHGS +DA GR+
Sbjct: 98 LSAMIDPAAFPTRVKSGHDQWLVVYGNCTHLGCVPIGHQGNFEGWACPCHGSQFDAVGRV 157
Query: 170 RKGPAPTNMEVPPYQF 185
R GPAP N+ +PPY F
Sbjct: 158 RHGPAPINLPIPPYAF 173
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 246 VNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
V ISSM+ AD +A A IEVDL I +GQ V WRGK +F+R
Sbjct: 38 VWPLISSMAPDADTIAAGAPIEVDLTPIQDGQIVNVFWRGKLIFVR 83
>gi|337270004|ref|YP_004614059.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium opportunistum WSM2075]
gi|336030314|gb|AEH89965.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Mesorhizobium opportunistum WSM2075]
Length = 158
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 94/139 (67%), Gaps = 14/139 (10%)
Query: 61 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA 120
+A+ A+AT+EVD++ + G S+ +WRGKP+ +R+RT+KEI+ + ++++L+DP A
Sbjct: 11 TAALPAEALATVEVDVSSLMPGMSLVVQWRGKPVVVRNRTEKEIEDGKAVSLAELKDPIA 70
Query: 121 ------------DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDAS 166
D++R +W+V++ +CTH GC+P+ G++GG+ CPCHGS YD +
Sbjct: 71 RNANLPADAPGIDANRTAPGKEAWIVMVQVCTHSGCIPVGQQGEFGGWLCPCHGSQYDTA 130
Query: 167 GRIRKGPAPTNMEVPPYQF 185
GRIRKGPAP NM +P +QF
Sbjct: 131 GRIRKGPAPENMAIPVFQF 149
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 254 SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+A+ A+AT+EVD++ + G S+ +WRGKP+ +R+R
Sbjct: 11 TAALPAEALATVEVDVSSLMPGMSLVVQWRGKPVVVRNR 49
>gi|86136884|ref|ZP_01055462.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. MED193]
gi|85826208|gb|EAQ46405.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. MED193]
Length = 186
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 97/146 (66%), Gaps = 14/146 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ EID + +++ L
Sbjct: 34 LVNQMNPSADVKALSSILVDISGVEVGTQISVMFLGKPVFIRRRTQAEIDEARAVDVAGL 93
Query: 116 RDPQ-----------ADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D AD +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGS
Sbjct: 94 IDTASENPNKPGTDAADQNRAMDENGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGD 187
HYD +GRIRKGPAP N+ VP +F D
Sbjct: 154 HYDTAGRIRKGPAPQNLHVPVAEFTD 179
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVKALSSILVDISGVEVGTQISVMFLGKPVFIRRR 77
>gi|333755441|gb|AEF97530.1| NobleW164STOP-TagRFP-T [synthetic construct]
Length = 163
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|339899227|ref|XP_001468974.2| putative reiske iron-sulfur protein precursor [Leishmania infantum
JPCM5]
gi|398023155|ref|XP_003864739.1| reiske iron-sulfur protein precursor, putative [Leishmania
donovani]
gi|321398726|emb|CAM72069.2| putative reiske iron-sulfur protein precursor [Leishmania infantum
JPCM5]
gi|322502975|emb|CBZ38059.1| reiske iron-sulfur protein precursor, putative [Leishmania
donovani]
Length = 297
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 38 AGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLF 95
A S+++G V A+ V + ++ IE ++ + E Q T WRGKP+F
Sbjct: 136 ALNSAMLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEIGELDERQCTTVVWRGKPVF 195
Query: 96 IRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGY 154
+ R+ +++ T +S L+DP+ D R D V+I ICTHLGCVPI N G + G+
Sbjct: 196 VYRRSARQMKEVMETPLSALKDPETDEARFPDRRDKAVVIAICTHLGCVPIPNEGLFNGF 255
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+CPCHGSHYD SGRIR+GPAP N+EVPPY++ D+ +
Sbjct: 256 FCPCHGSHYDPSGRIRQGPAPLNLEVPPYRWIDDNTI 292
>gi|170744822|ref|YP_001773477.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium sp. 4-46]
gi|168199096|gb|ACA21043.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium sp. 4-46]
Length = 187
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 4/141 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+SSM+ A+ +A A IEVDL+ I EGQ + WRGK +F+R + KEI+ + +
Sbjct: 41 FVSSMAPDAETIAAGAPIEVDLSPISEGQIINVFWRGKLIFVRRLSAKEIEDMKAVKMGD 100
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DP RVK+ WLV G CTHLGCVPI + G++ G+ CPCHGS +DA GR+R+G
Sbjct: 101 LIDPAPYYARVKEGHDQWLVSYGNCTHLGCVPIGHQGNFEGWACPCHGSQFDAVGRVRRG 160
Query: 173 PAPTNMEVPPYQF-GDEGILI 192
PAP N+ +PPY F GD + I
Sbjct: 161 PAPINLPIPPYAFQGDAKVRI 181
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIR 290
F+SSM+ A+ +A A IEVDL+ I EGQ + WRGK +F+R
Sbjct: 41 FVSSMAPDAETIAAGAPIEVDLSPISEGQIINVFWRGKLIFVR 83
>gi|38048323|gb|AAR10064.1| similar to Drosophila melanogaster CG7361, partial [Drosophila
yakuba]
Length = 158
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRESVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSPYRRESVKDSRRRNETAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLADIPEGKSVTFKWRGKPLFIRHR 135
>gi|126741003|ref|ZP_01756686.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. SK209-2-6]
gi|126717929|gb|EBA14648.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Roseobacter
sp. SK209-2-6]
Length = 186
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 97/146 (66%), Gaps = 14/146 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ EID + +++ L
Sbjct: 34 LVNQMNPSADVKALSSILVDVSGVEVGTQISVMFLGKPVFIRRRTQAEIDEAREVDVAGL 93
Query: 116 RDPQ-----------ADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D AD +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGS
Sbjct: 94 IDTASENPNKPGTDAADENRAMDENGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGD 187
HYD SGRIRKGPAP N+ +P +F D
Sbjct: 154 HYDTSGRIRKGPAPENLWIPVAEFTD 179
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVKALSSILVDVSGVEVGTQISVMFLGKPVFIRRR 77
>gi|342183716|emb|CCC93196.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 297
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 3/169 (1%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIP 80
K +E + +A A S+++G V + V + ++ IE ++ +
Sbjct: 121 KLPDELEDRARVMDYALNSALLGFVILMVRYAVLPLWYVGQPAMSMVGQMNIEAEVGELE 180
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTH 139
+ + T WRGKP+F+ R++++++ +T +S L+ P+ D R D V+I ICTH
Sbjct: 181 DRECKTVVWRGKPVFVYRRSERQMNDLLSTPLSALKHPETDEARFPDHRDMAVVIAICTH 240
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
LGC+PI N G +GG++CPCHGSHYDASGRIR+GPAP N+EVPPY++ D+
Sbjct: 241 LGCIPIPNEGLFGGFFCPCHGSHYDASGRIRQGPAPLNLEVPPYRWVDD 289
>gi|154344627|ref|XP_001568255.1| putative reiske iron-sulfur protein precursor [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134065592|emb|CAM43362.1| putative reiske iron-sulfur protein precursor [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 297
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 38 AGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLF 95
A S+++G V A+ V + ++ IE ++ + E Q T WRGKP+F
Sbjct: 136 ALNSAMLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELDERQCTTVVWRGKPVF 195
Query: 96 IRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGY 154
+ R+ +++ T +S L+DP+ D R D V+I ICTHLGCVPI N G + G+
Sbjct: 196 VYRRSARQMKELMETPLSVLKDPETDEARFPDRRDKAVVIAICTHLGCVPIPNEGLFNGF 255
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+CPCHGSHYD SGRIR+GPAP N+EVPPY++ D+ +
Sbjct: 256 FCPCHGSHYDPSGRIRQGPAPLNLEVPPYRWIDDNTI 292
>gi|71657437|ref|XP_817234.1| reiske iron-sulfur protein precursor [Trypanosoma cruzi strain CL
Brener]
gi|70882412|gb|EAN95383.1| reiske iron-sulfur protein precursor, putative [Trypanosoma cruzi]
Length = 297
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIP 80
K EE + +A A S+++G V A+ V + ++ IE ++ +
Sbjct: 121 KLPEELEDRARVTDYALNSALLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELE 180
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTH 139
+ Q T WRG+P+F+ R+ +++ Q T +S L+ P+ D R D V+I ICTH
Sbjct: 181 DRQCKTIVWRGRPVFVYKRSARQMKELQETPLSALKHPETDEARFPDHREKAVVIAICTH 240
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
LGC+PI N G + G++CPCHGSHYDASGR R+GPAP N+EVPPY++ D+ +
Sbjct: 241 LGCIPIPNEGLYNGFFCPCHGSHYDASGRTRQGPAPLNLEVPPYKWIDDNTI 292
>gi|383286752|gb|AFH01419.1| FI20123p1 [Drosophila melanogaster]
Length = 260
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|389594647|ref|XP_003722546.1| putative reiske iron-sulfur protein precursor [Leishmania major
strain Friedlin]
gi|323363774|emb|CBZ12780.1| putative reiske iron-sulfur protein precursor [Leishmania major
strain Friedlin]
Length = 297
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 94/154 (61%), Gaps = 3/154 (1%)
Query: 38 AGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLF 95
A S+++G V A+ V + ++ IE ++ + E Q T WRGKP+F
Sbjct: 136 ALNSAMLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELDERQCTTVVWRGKPVF 195
Query: 96 IRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGY 154
+ R+ +++ T +S L+DP+ D R D V+I ICTHLGCVPI N G + G+
Sbjct: 196 VYRRSARQMKEVMETPLSALKDPETDEARFPDHRDKAVVIAICTHLGCVPIPNEGLFNGF 255
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
+CPCHGSHYD SGRIR+GPAP N+EVPPY++ D+
Sbjct: 256 FCPCHGSHYDPSGRIRQGPAPLNLEVPPYRWIDD 289
>gi|254476250|ref|ZP_05089636.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria sp.
R11]
gi|214030493|gb|EEB71328.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ruegeria sp.
R11]
Length = 186
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 99/146 (67%), Gaps = 14/146 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RTQ+EID + ++++L
Sbjct: 34 LVNQMNPSADVQALSSIIVDVSGVEVGTQISVMFLGKPVFIRRRTQEEIDEARAVDLAEL 93
Query: 116 RDP-----------QADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D +D +R D + WLV++G+CTHLGCVP+ + AG++ G++CPCHGS
Sbjct: 94 PDQLDRNANKPGLDASDENRTLDDAGEWLVMMGVCTHLGCVPLGDGAGEFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGD 187
HYD +GRIRKGPAP N+ VP +F D
Sbjct: 154 HYDTAGRIRKGPAPENLPVPTAEFID 179
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR R
Sbjct: 34 LVNQMNPSADVQALSSIIVDVSGVEVGTQISVMFLGKPVFIRRR 77
>gi|407860828|gb|EKG07529.1| reiske iron-sulfur protein precursor, putative [Trypanosoma cruzi]
Length = 297
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 100/169 (59%), Gaps = 3/169 (1%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
EE + +A A S+++G V A+ V + ++ IE ++ + + Q
Sbjct: 124 EELEDRARVTDYALNSALLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELEDRQ 183
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTHLGC 142
T WRG+P+F+ R+ +++ Q T +S L+ P+ D R D V+I ICTHLGC
Sbjct: 184 CKTIVWRGRPVFVYKRSARQMKELQETPLSALKHPETDEARFPDHREKAVVIAICTHLGC 243
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+PI N G + G++CPCHGSHYDASGR R+GPAP N+EVPPY++ D+ +
Sbjct: 244 IPIPNEGLYNGFFCPCHGSHYDASGRTRQGPAPLNLEVPPYKWIDDNTI 292
>gi|407408021|gb|EKF31604.1| reiske iron-sulfur protein precursor, putative [Trypanosoma cruzi
marinkellei]
Length = 297
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 101/172 (58%), Gaps = 3/172 (1%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIP 80
K EE + +A A S+++G V A+ V + ++ IE ++ +
Sbjct: 121 KLPEELEDRARVTDYALNSALLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELE 180
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTH 139
+ Q T WRG+P+F+ R+ +++ Q T +S L+ P+ D R D V+I ICTH
Sbjct: 181 DRQCKTIVWRGRPVFVYKRSARQMKELQETPMSALKHPETDEARFPDHREKAVVIAICTH 240
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
LGC+PI N G + G++CPCHGSHYDASGR R+GPAP N+EVPPY++ D+ +
Sbjct: 241 LGCIPIPNEGLYNGFFCPCHGSHYDASGRTRQGPAPLNLEVPPYKWIDDNTI 292
>gi|71746046|ref|XP_827610.1| reiske iron-sulfur protein mitochondrial precursor [Trypanosoma
brucei]
gi|1143998|gb|AAA89058.1| Reiske iron-sulfur protein precursor [Trypanosoma brucei]
gi|70831775|gb|EAN77280.1| reiske iron-sulfur protein , mitochondrial precursor [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261331817|emb|CBH14811.1| reiske iron-sulfur protein, mitochondrial precursor [Trypanosoma
brucei gambiense DAL972]
Length = 297
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
++ IE ++ + + + T WRGKP+F+ R++++++ T +S L+ P+ D R
Sbjct: 166 MVGQMNIEAEVGELEDRECKTVVWRGKPVFVYRRSERQMNDVLGTPLSALKHPETDEARF 225
Query: 126 KDPSWL-VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
D + V+I ICTHLGC+PI N G +GG++CPCHGSHYDASGRIR+GPAP N+EVPPY+
Sbjct: 226 PDHREMAVVIAICTHLGCIPIPNEGLFGGFFCPCHGSHYDASGRIRQGPAPLNLEVPPYR 285
Query: 185 FGDE 188
+ D+
Sbjct: 286 WVDD 289
>gi|451942273|ref|YP_007462910.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901660|gb|AGF76122.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 181
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 103/180 (57%), Gaps = 19/180 (10%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F +++ G + VG+ +V FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLLTGLTGAVGL---SAVAWPFIRQLPPDESVLASSSVEVDLSGIEEGMSVT 59
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP---------------SWL 131
KWRG+P+ I +RT KEI + +S LRD Q + ++ +WL
Sbjct: 60 VKWRGQPVVIHNRTAKEIAEARAIELSILRDRQVRNPNLESEEDATDFARSAGKGHENWL 119
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
II +CTHLG V + +G +GG+ CPCHGS YD GR+R GPA N+ +PPY+F + +L
Sbjct: 120 -IINLCTHLGSVTLGQSGKFGGWLCPCHGSVYDTVGRVRSGPAHYNLAIPPYRFLSDTLL 178
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F +++ G + VG+ +V FI + VLA +++EVDL+ I EG SVT
Sbjct: 3 EQTRRDFLFLLTGLTGAVGL---SAVAWPFIRQLPPDESVLASSSVEVDLSGIEEGMSVT 59
Query: 280 FKWRGKPLFIRHR 292
KWRG+P+ I +R
Sbjct: 60 VKWRGQPVVIHNR 72
>gi|254293113|ref|YP_003059136.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Hirschia
baltica ATCC 49814]
gi|254041644|gb|ACT58439.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Hirschia
baltica ATCC 49814]
Length = 189
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 92/147 (62%), Gaps = 11/147 (7%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
F+ + +AD A ++ EVD + IP G + GKP F+RHRT+ EI + N+S+L
Sbjct: 39 FVMQLGPAADTRAASSAEVDTSKIPLGGEIRVLIGGKPFFVRHRTEAEIAAAEAVNLSKL 98
Query: 116 RDPQADSDRV-------KDPSWLVIIGICTHLGCVPIA----NAGDWGGYYCPCHGSHYD 164
DPQ D +R+ + + LV G CTHLGCVP+ N GD+GG+YCPCHGSHYD
Sbjct: 99 PDPQTDDERLVPMMNGELNRAILVTSGACTHLGCVPVGPAQGNTGDFGGWYCPCHGSHYD 158
Query: 165 ASGRIRKGPAPTNMEVPPYQFGDEGIL 191
SGRIRKGPAP N+ VP Y + + ++
Sbjct: 159 TSGRIRKGPAPKNLPVPTYAYLSDSLI 185
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ + +AD A ++ EVD + IP G + GKP F+RHR
Sbjct: 39 FVMQLGPAADTRAASSAEVDTSKIPLGGEIRVLIGGKPFFVRHR 82
>gi|340056553|emb|CCC50886.1| putative reiske iron-sulfur protein precursor [Trypanosoma vivax
Y486]
Length = 297
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 3/169 (1%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIP 80
K +E + +A A S+++G V A+ + + ++ IE ++ +
Sbjct: 121 KLPDELEDRARVMDYALNSALLGFVVLMARYALLPLWYVGQPAMSMVGHMNIEAEVGDLE 180
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTH 139
E + T WRGKP+F+ R+++++ T +S L+ P+ D R D V++ ICTH
Sbjct: 181 ERECKTVVWRGKPIFVYRRSERQLKDVLGTPLSALKHPETDEVRFPDHRDKAVVVAICTH 240
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
LGC+PI N G +GG++CPCHGSHYDASGRIR+GPAP N+EVPPY++ D+
Sbjct: 241 LGCIPIPNEGLFGGFFCPCHGSHYDASGRIRQGPAPLNLEVPPYRWVDD 289
>gi|333755444|gb|AEF97532.1| NobleOPT-TagRFP-T [synthetic construct]
Length = 503
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|55140554|gb|AAV41428.1| Rieske Fe-S protein [Periplaneta americana]
Length = 70
Score = 136 bits (342), Expect = 1e-29, Method: Composition-based stats.
Identities = 55/68 (80%), Positives = 62/68 (91%)
Query: 125 VKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQ 184
V++ WLVIIG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+EVPPY+
Sbjct: 1 VQEAEWLVIIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPPYE 60
Query: 185 FGDEGILI 192
F +G LI
Sbjct: 61 FPGDGTLI 68
>gi|333755438|gb|AEF97528.1| Noble-TagRFP-T [synthetic construct]
Length = 503
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 135
>gi|333755435|gb|AEF97526.1| VisGreen-Noble [synthetic construct]
Length = 529
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 305 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 364
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHRT EI+TE+N S LRDP+
Sbjct: 365 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHRTAAEIETERNVPTSTLRDPE 424
Query: 120 AD 121
AD
Sbjct: 425 AD 426
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 305 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 364
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRHR
Sbjct: 365 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHR 404
>gi|333755415|gb|AEF97516.1| Rieske iron-sulfur protein [Drosophila tsacasi]
Length = 74
Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 56/71 (78%), Positives = 62/71 (87%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKG
Sbjct: 4 SSLRDPETDDQRVIKPEWLVVIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKG 63
Query: 173 PAPTNMEVPPY 183
PAP N+EVP +
Sbjct: 64 PAPLNLEVPTH 74
>gi|62319498|dbj|BAD94896.1| ubiquinol--cytochrome-c reductase - like protein [Arabidopsis
thaliana]
Length = 78
Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 53/76 (69%), Positives = 65/76 (85%)
Query: 117 DPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPT 176
DPQ DS RVK+P WLV++G+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP
Sbjct: 1 DPQEDSVRVKNPGWLVVVGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPY 60
Query: 177 NMEVPPYQFGDEGILI 192
N+EVP Y F +E L+
Sbjct: 61 NLEVPTYSFLEENKLL 76
>gi|401429334|ref|XP_003879149.1| putative reiske iron-sulfur protein precursor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495399|emb|CBZ30703.1| putative reiske iron-sulfur protein precursor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 297
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 38 AGGSSVVGMVC--AKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLF 95
A S+++G V A+ V + ++ IE ++ + E Q T WRGKP+F
Sbjct: 136 ALNSAMLGFVILMARYAVLPLWYVGQPAMSMVGQMNIEAEVGELDERQCTTVVWRGKPVF 195
Query: 96 IRHRTQKEIDTEQNTNISQLRDPQADSDRVKDP-SWLVIIGICTHLGCVPIANAGDWGGY 154
+ R+ +++ T +S L+DP+ D R + V+I ICTHLGCVPI N G + G+
Sbjct: 196 VYRRSARQMKEVMETPMSALKDPETDEARFPEHRDKAVVIAICTHLGCVPIPNEGLFNGF 255
Query: 155 YCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
+CPCHGSHYD SGRIR+GPAP N+EVPPY++ D+ +
Sbjct: 256 FCPCHGSHYDPSGRIRQGPAPLNLEVPPYRWIDDNTI 292
>gi|254449805|ref|ZP_05063242.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Octadecabacter arcticus 238]
gi|198264211|gb|EDY88481.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Octadecabacter arcticus 238]
Length = 166
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 31/160 (19%)
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+ SADVLA+A+I V ++ + G +T W+GKP+FIR RT+ EI+ + I L D
Sbjct: 1 MNPSADVLALASIRVPVDSVEPGTQLTVLWQGKPVFIRRRTETEIEAARAVAIEDLVDTN 60
Query: 120 ADSDRVKDPS------------------------------WLVIIGICTHLGCVPIAN-A 148
A++ + + WLV +G+CTHLGCVP+ + A
Sbjct: 61 AENANIAGEAEATDENRSLVNFSPPNPDGTMGAPIGTTGEWLVQMGVCTHLGCVPLGDGA 120
Query: 149 GDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
GD+GG++CPCHGSHYD +GRIRKGPAP N+ VP F DE
Sbjct: 121 GDFGGWFCPCHGSHYDTAGRIRKGPAPRNLPVPVASFVDE 160
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+ SADVLA+A+I V ++ + G +T W+GKP+FIR R
Sbjct: 1 MNPSADVLALASIRVPVDSVEPGTQLTVLWQGKPVFIRRR 40
>gi|115523228|ref|YP_780139.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
gi|115517175|gb|ABJ05159.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisA53]
Length = 175
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 82/128 (64%), Gaps = 2/128 (1%)
Query: 66 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRV 125
V A IEVDL I EGQS+ WRG P+F+ HRT EI + +N + L DPQ+D DR
Sbjct: 45 VAGGAPIEVDLAPIAEGQSIKVFWRGAPIFVNHRTPAEIASARNVDWKTLIDPQSDEDRT 104
Query: 126 K--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPY 183
K WLV+ GICTHLGC+P + G+ G+ C CHGS YD+SGR+RKGPAP N+ + P
Sbjct: 105 KAGHEQWLVVNGICTHLGCIPNYHEGEHDGWLCHCHGSQYDSSGRVRKGPAPANLALVPV 164
Query: 184 QFGDEGIL 191
F + L
Sbjct: 165 DFPTDTTL 172
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%)
Query: 259 VLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
V A IEVDL I EGQS+ WRG P+F+ HR
Sbjct: 45 VAGGAPIEVDLAPIAEGQSIKVFWRGAPIFVNHR 78
>gi|312113535|ref|YP_004011131.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Rhodomicrobium vannielii ATCC 17100]
gi|311218664|gb|ADP70032.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodomicrobium vannielii ATCC 17100]
Length = 194
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 94/152 (61%), Gaps = 19/152 (12%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
FI M+ A ++++TIEVD++ + GQ++T WRG P+F+R+ T +EI + +++ L
Sbjct: 37 FIDQMNPDASTMSLSTIEVDISPVQTGQAITVLWRGMPIFVRNLTPEEIGKAKAVDVADL 96
Query: 116 RDP-----------QADSDRVKDP---SWLVIIGICTHLGCVPIANA-----GDWGGYYC 156
+DP A + + P +WL+ +GICTHLGCVP + G +GGY+C
Sbjct: 97 KDPVARLLGSTAEIPASAANITKPGKENWLIAVGICTHLGCVPKGQSPGDPRGPYGGYFC 156
Query: 157 PCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
CHGS YD GR+R GPAP N+++PPY+F E
Sbjct: 157 VCHGSIYDTLGRVRGGPAPRNLDIPPYEFTGE 188
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
FI M+ A ++++TIEVD++ + GQ++T WRG P+F+R+
Sbjct: 37 FIDQMNPDASTMSLSTIEVDISPVQTGQAITVLWRGMPIFVRN 79
>gi|90424717|ref|YP_533087.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
gi|90106731|gb|ABD88768.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodopseudomonas palustris BisB18]
Length = 180
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
Query: 63 SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS 122
++ V A +EVDL + GQ + WRG+P+FI HRT EI++ Q + RDPQ DS
Sbjct: 44 ASTVAAGFPLEVDLAPMAAGQVIKVFWRGQPIFISHRTPHEIESAQTADWQSFRDPQPDS 103
Query: 123 DRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEV 180
RVK WLV+ ICTHLGC+P + G++ G++C CHGS YD+SGR R GPAP N+ +
Sbjct: 104 ARVKPGHEQWLVVSAICTHLGCIPTEHQGNYDGWFCQCHGSQYDSSGRARLGPAPLNLAL 163
Query: 181 PPYQF 185
PY+F
Sbjct: 164 VPYEF 168
>gi|333755257|gb|AEF97437.1| Rieske iron-sulfur protein [Nigronia serricornis]
Length = 80
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 53/79 (67%), Positives = 68/79 (86%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG++VTFKWRGKPLF++HRT +EI TE+ +S+LRDP+ D R + P WL+++G+CT
Sbjct: 2 IPEGKNVTFKWRGKPLFVKHRTAEEIATEKAVPLSELRDPEPDEQRAQRPEWLIVLGVCT 61
Query: 139 HLGCVPIANAGDWGGYYCP 157
HLGCVPIANAGD+GGYYCP
Sbjct: 62 HLGCVPIANAGDFGGYYCP 80
Score = 47.0 bits (110), Expect = 0.010, Method: Composition-based stats.
Identities = 17/21 (80%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG++VTFKWRGKPLF++HR
Sbjct: 2 IPEGKNVTFKWRGKPLFVKHR 22
>gi|393767857|ref|ZP_10356401.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium sp. GXF4]
gi|392726668|gb|EIZ83989.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacterium sp. GXF4]
Length = 197
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 6/165 (3%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEG 82
G E R+ F ++ + V A + V ISSM+ A+ +A A I+VDL I +G
Sbjct: 20 GPHEGSRRDFLFLA---TGAGLAVGAAATVWPLISSMAPDAETIAAGAPIDVDLTPIQDG 76
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHL 140
Q + WRGK +F+R T KE+ Q+ ++ + DP RVK+ WLV+ G CTHL
Sbjct: 77 QIINVFWRGKLIFVRKLTAKEVTDMQSVPLTAMIDPAPFPTRVKNGHDQWLVVYGNCTHL 136
Query: 141 GCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
GCVPI + G++ G+ CPCHGS +DA GR+R GPAP N+ +PPY F
Sbjct: 137 GCVPIGHQGNFEGWACPCHGSQFDAVGRVRHGPAPINLPIPPYAF 181
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEG 275
G E R+ F ++ + V A + V ISSM+ A+ +A A I+VDL I +G
Sbjct: 20 GPHEGSRRDFLFLA---TGAGLAVGAAATVWPLISSMAPDAETIAAGAPIDVDLTPIQDG 76
Query: 276 QSVTFKWRGKPLFIR 290
Q + WRGK +F+R
Sbjct: 77 QIINVFWRGKLIFVR 91
>gi|33636485|gb|AAQ23540.1| RH01528p [Drosophila melanogaster]
Length = 260
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 89/122 (72%), Gaps = 3/122 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRH T EI+TE+N S LRDP+
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRHSTAAEIETERNVPTSTLRDPE 155
Query: 120 AD 121
AD
Sbjct: 156 AD 157
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 73/99 (73%), Gaps = 3/99 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPD---KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
AH+D++ PDFS YRR+ D + +RKAF+Y++ G +V G AK +VN FI S
Sbjct: 36 AHTDLQVPDFSAYRRESVKDSRRRNDTAEERKAFSYLMVGAGAVGGAYAAKGLVNTFIGS 95
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRH 291
MSASA+VLAMA IE+ L+ IPEG+SVTFKWRGKPLFIRH
Sbjct: 96 MSASAEVLAMAKIEIKLSDIPEGKSVTFKWRGKPLFIRH 134
>gi|333755247|gb|AEF97432.1| Rieske iron-sulfur protein [Saropogon fletcheri]
Length = 79
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%)
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICT 138
IPEG+S+TFKWRGKPLFIRHRT EI TE++ +S LRDPQ D RV+ P WL++IG+CT
Sbjct: 2 IPEGKSMTFKWRGKPLFIRHRTPSEISTERSVAVSTLRDPQPDEVRVQKPEWLIVIGVCT 61
Query: 139 HLGCVPIANAGDWGGYYC 156
HLGCVPIANAGD+GGYYC
Sbjct: 62 HLGCVPIANAGDFGGYYC 79
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 21/21 (100%)
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
IPEG+S+TFKWRGKPLFIRHR
Sbjct: 2 IPEGKSMTFKWRGKPLFIRHR 22
>gi|304321675|ref|YP_003855318.1| ubiquinol-cytochrome c reductase iron-sulfur subunit protein
[Parvularcula bermudensis HTCC2503]
gi|303300577|gb|ADM10176.1| putative ubiquinol-cytochrome c reductase iron-sulfur subunit
protein [Parvularcula bermudensis HTCC2503]
Length = 217
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
PD+G R+ F +++A G++ +V V + M+ +ADV A+AT EV L +
Sbjct: 31 TPDEG-----RRDFIHLLASGTAAAAVVGIAIPV---VHQMNPAADVRALATKEVSLAGV 82
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD------------ 127
GQ++ W+GKP+FIR T EI + + QL+D + +D V D
Sbjct: 83 EIGQAIKVMWQGKPVFIRRLTDAEIARAEALS-GQLKDDASRNDNVPDMPADAAGRLVGP 141
Query: 128 ----PSWLVIIGICTHLGCVPIA-----NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
+++++G+CTHLGCVP+ N GD+GG++CPCHGSHYD GRI KGPAP N+
Sbjct: 142 DGQAQDFVMVLGVCTHLGCVPLGTEPGENKGDYGGWFCPCHGSHYDPFGRIIKGPAPENL 201
Query: 179 EVPPYQF 185
VPP QF
Sbjct: 202 AVPPLQF 208
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
PD+G R+ F +++A G++ +V V + M+ +ADV A+AT EV L +
Sbjct: 31 TPDEG-----RRDFIHLLASGTAAAAVVGIAIPV---VHQMNPAADVRALATKEVSLAGV 82
Query: 273 PEGQSVTFKWRGKPLFIR 290
GQ++ W+GKP+FIR
Sbjct: 83 EIGQAIKVMWQGKPVFIR 100
>gi|13471087|ref|NP_102656.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Mesorhizobium
loti MAFF303099]
gi|14021831|dbj|BAB48442.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Mesorhizobium
loti MAFF303099]
Length = 176
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 84/131 (64%), Gaps = 14/131 (10%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+ ++EVD++ + G SV W GKP+ +RHRT+KE + N++ L+DP A
Sbjct: 37 LTSVEVDVSALAPGTSVVVNWNGKPVVVRHRTEKERKDSEAVNLADLKDPIARNANLPAD 96
Query: 121 ----DSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPA 174
D++R +W+VI+ +CTHLGC+P GD+GG+ CPCHGS YD++GR+RKGPA
Sbjct: 97 APATDANRAAPGKEAWIVIVQVCTHLGCIPSYKEGDFGGWLCPCHGSQYDSAGRVRKGPA 156
Query: 175 PTNMEVPPYQF 185
NM VP +QF
Sbjct: 157 LENMAVPEFQF 167
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 262 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ ++EVD++ + G SV W GKP+ +RHR
Sbjct: 37 LTSVEVDVSALAPGTSVVVNWNGKPVVVRHR 67
>gi|444312210|ref|ZP_21147803.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
intermedium M86]
gi|443484462|gb|ELT47271.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ochrobactrum
intermedium M86]
Length = 224
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/153 (42%), Positives = 94/153 (61%), Gaps = 18/153 (11%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
E R+ F Y+ G + VVG+ + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATGMAGVVGVA---GLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-DSDRVKDP--------------SWL 131
KWRGKP+FIR+R+ KE++ + T + L+DP A +++ D +WL
Sbjct: 65 VKWRGKPVFIRNRSAKEVEDAKTTALGDLKDPIARNANLASDAQATDLARSAGEGKENWL 124
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYD 164
V+IG+CTHLGCVP+ +G +GG++CPCHGS YD
Sbjct: 125 VMIGVCTHLGCVPLGESGSFGGWFCPCHGSTYD 157
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
E R+ F Y+ G + VVG+ + FI M A LA A+IEVD++ + EG S+T
Sbjct: 8 EPTRRDFLYIATGMAGVVGVA---GLAWPFIDQMRPDASTLAAASIEVDVSSLTEGASLT 64
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR+R
Sbjct: 65 VKWRGKPVFIRNR 77
>gi|54295546|ref|YP_127961.1| hypothetical protein lpl2633 [Legionella pneumophila str. Lens]
gi|53755378|emb|CAH16874.1| hypothetical protein lpl2633 [Legionella pneumophila str. Lens]
Length = 205
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 23/201 (11%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 69
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 58
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD------ 123
A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP + D
Sbjct: 59 APVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYA 118
Query: 124 ----RVKDPSWLVIIGICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG 172
R +P +LV+IGICTHLGC P + G DW GG++CPCHGS +D SGR+ KG
Sbjct: 119 QNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFKG 178
Query: 173 -PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY F DE ++
Sbjct: 179 VPAPINLEVPPYHFLDEHTIV 199
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 262
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 58
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++VD++ + G+ +WRGKP++I R
Sbjct: 59 APVKVDVSRMEPGEQAIIEWRGKPVWIIKR 88
>gi|52842911|ref|YP_096710.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|378778600|ref|YP_005187039.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52630022|gb|AAU28763.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|364509415|gb|AEW52939.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 208
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 23/201 (11%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 69
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD------ 123
A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP + D
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYA 121
Query: 124 ----RVKDPSWLVIIGICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG 172
R +P +LV+IGICTHLGC P + G DW GG++CPCHGS +D SGR+ KG
Sbjct: 122 QNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFKG 181
Query: 173 -PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY F DE ++
Sbjct: 182 VPAPINLEVPPYHFLDEHTIV 202
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 262
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++VD++ + G+ +WRGKP++I R
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKR 91
>gi|410375217|pdb|2NUK|A Chain A, Soluble Domain Of The Rieske Iron-Sulfur Protein From
Rhodobacter Sphaeroides
Length = 141
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 90/135 (66%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHGSHYD++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHYDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|307611582|emb|CBX01264.1| hypothetical protein LPW_29621 [Legionella pneumophila 130b]
Length = 205
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 27/203 (13%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAF--TYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVL 67
D ++ + N D+ +E +R+ T I GG VG CA + FI+S + +S
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHTTCILGG---VGAACA---LTPFITSWLPSSKAQA 56
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD---- 123
A A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP + D
Sbjct: 57 AGAPVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPE 116
Query: 124 ------RVKDPSWLVIIGICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIR 170
R +P +LV+IGICTHLGC P + G DW GG++CPCHGS +D SGR+
Sbjct: 117 YAQNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVF 176
Query: 171 KG-PAPTNMEVPPYQFGDEGILI 192
KG PAP N+EVPPY F DE ++
Sbjct: 177 KGVPAPINLEVPPYHFLDEHTIV 199
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAF--TYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVL 260
D ++ + N D+ +E +R+ T I GG VG CA + FI+S + +S
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHTTCILGG---VGAACA---LTPFITSWLPSSKAQA 56
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A A ++VD++ + G+ +WRGKP++I R
Sbjct: 57 AGAPVKVDVSRMEPGEQAIIEWRGKPVWIIKR 88
>gi|126031224|pdb|2NVG|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG+HYD++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGAHYDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|126031222|pdb|2NVE|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG+HYD++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGTHYDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|126031220|pdb|2NUM|A Chain A, Soluble Domain Of Rieske Iron-Sulfur Protein
Length = 141
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHGSH+D++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHFDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|54298696|ref|YP_125065.1| hypothetical protein lpp2760 [Legionella pneumophila str. Paris]
gi|296108353|ref|YP_003620054.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Legionella
pneumophila 2300/99 Alcoy]
gi|53752481|emb|CAH13913.1| hypothetical protein lpp2760 [Legionella pneumophila str. Paris]
gi|295650255|gb|ADG26102.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Legionella
pneumophila 2300/99 Alcoy]
Length = 205
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 23/201 (11%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 69
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 58
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD------ 123
A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP + D
Sbjct: 59 APVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYA 118
Query: 124 ----RVKDPSWLVIIGICTHLGCVP--IANAG----DW-GGYYCPCHGSHYDASGRIRKG 172
R +P +LV+IGICTHLGC P N G DW GG++CPCHGS +D SGR+ KG
Sbjct: 119 QNKFRSINPEFLVLIGICTHLGCSPKYKPNLGELGPDWPGGFFCPCHGSMFDLSGRVFKG 178
Query: 173 -PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY F D+ ++
Sbjct: 179 VPAPINLEVPPYHFLDDHTIV 199
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 262
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 3 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 58
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++VD++ + G+ +WRGKP++I R
Sbjct: 59 APVKVDVSRMEPGEQAIIEWRGKPVWIIKR 88
>gi|148358558|ref|YP_001249765.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Legionella
pneumophila str. Corby]
gi|397668381|ref|YP_006509918.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila]
gi|148280331|gb|ABQ54419.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila str. Corby]
gi|395131792|emb|CCD10085.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila]
Length = 208
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 116/201 (57%), Gaps = 23/201 (11%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 69
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD------ 123
A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP + D
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVDQQPEYA 121
Query: 124 ----RVKDPSWLVIIGICTHLGCVP--IANAG----DW-GGYYCPCHGSHYDASGRIRKG 172
R +P +LV+IGICTHLGC P N G DW GG++CPCHGS +D SGR+ KG
Sbjct: 122 QNKFRSINPEFLVLIGICTHLGCSPKYKPNLGELGPDWPGGFFCPCHGSMFDLSGRVFKG 181
Query: 173 -PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY F D+ ++
Sbjct: 182 VPAPINLEVPPYHFLDDHTIV 202
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 262
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++VD++ + G+ +WRGKP++I R
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKR 91
>gi|397665298|ref|YP_006506836.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila]
gi|395128709|emb|CCD06927.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
pneumophila subsp. pneumophila]
Length = 208
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 116/201 (57%), Gaps = 23/201 (11%)
Query: 11 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 69
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA--------- 120
A ++VD++ + G+ +WRGKP++I R++ ++ Q + SQLRDP +
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKRSKDMLNQLQKEDESQLRDPDSLVEQQPEYA 121
Query: 121 -DSDRVKDPSWLVIIGICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG 172
+ R +P +LV+IGICTHLGC P + G DW GG++CPCHGS +D SGR+ KG
Sbjct: 122 QNKFRSINPEFLVLIGICTHLGCSPKYKPSLGELGPDWPGGFFCPCHGSMFDLSGRVFKG 181
Query: 173 -PAPTNMEVPPYQFGDEGILI 192
PAP N+EVPPY F DE ++
Sbjct: 182 VPAPINLEVPPYYFLDEHTIV 202
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 204 DFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS-MSASADVLAM 262
D ++ + N D+ +E +R+ + + V+G V A + FI+S + +S A
Sbjct: 6 DLNQDVSNHNQDEQLDEERRRFLLHT----TCVLGGVGAACALTPFITSWLPSSKAQAAG 61
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++VD++ + G+ +WRGKP++I R
Sbjct: 62 APVKVDVSRMEPGEQAIIEWRGKPVWIIKR 91
>gi|126031223|pdb|2NVF|A Chain A, Soluble Domain Of Rieske Iron-Sulfur Protein
Length = 141
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 89/135 (65%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG HYD++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGCHYDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|444841760|pdb|2NWF|A Chain A, Soluble Domain Of Rieske Iron Sulfur Protein
Length = 141
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 90/135 (66%), Gaps = 15/135 (11%)
Query: 69 MATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-------- 120
+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL D A
Sbjct: 1 LASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAG 60
Query: 121 ----DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGP 173
D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHGSH+D++GRIRKGP
Sbjct: 61 AEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHGSHWDSAGRIRKGP 120
Query: 174 APTNMEVPPYQFGDE 188
AP N+ +P +F DE
Sbjct: 121 APENLPIPLAKFIDE 135
>gi|388455199|ref|ZP_10137494.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Fluoribacter
dumoffii Tex-KL]
Length = 203
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 111/192 (57%), Gaps = 20/192 (10%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNL 78
+PD+ + + + + + V+G + A V ISS SA V A A ++VDL+
Sbjct: 7 DPDQEKNDLVDEDRRRFLLKTTCVLGGIGALCAVTPLISSWFPSAKVQAEGAPVQVDLSN 66
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDP 128
+ G+ +WRGKP++I RT KE+ T+ S+LRDP + ++ R +P
Sbjct: 67 LEPGEQAVVEWRGKPVWIIRRT-KEMLQRLTTHSSRLRDPHSRTRQQPSYATNAHRSINP 125
Query: 129 SWLVIIGICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEV 180
+LV+IGICTHLGC P + + G DW GG++CPCHGS +D SGR+ K PAP NMEV
Sbjct: 126 EYLVLIGICTHLGCSPKYKPNLGDLGPDWPGGFFCPCHGSAFDLSGRVFKDVPAPINMEV 185
Query: 181 PPYQFGDEGILI 192
PPY F DE L+
Sbjct: 186 PPYYFIDEHTLV 197
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNL 271
+PD+ + + + + + V+G + A V ISS SA V A A ++VDL+
Sbjct: 7 DPDQEKNDLVDEDRRRFLLKTTCVLGGIGALCAVTPLISSWFPSAKVQAEGAPVQVDLSN 66
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
+ G+ +WRGKP++I R
Sbjct: 67 LEPGEQAVVEWRGKPVWIIRR 87
>gi|292493820|ref|YP_003529259.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Nitrosococcus halophilus Nc4]
gi|291582415|gb|ADE16872.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus halophilus Nc4]
Length = 201
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 101/175 (57%), Gaps = 23/175 (13%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
++VVG V F+ SM S A A +EVD++ + GQ +T +WRGKP++I R
Sbjct: 18 ATVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGQLMTVEWRGKPVWILRR 77
Query: 100 TQKEIDT-EQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGCVPIAN 147
TQ+EI++ E T S LRDP ++ + R +P LV+IGICTHLGC P
Sbjct: 78 TQEEIESVEALTESSTLRDPLSEEEAQQPPFAQNVYRSIEPEILVVIGICTHLGCSPTFR 137
Query: 148 --------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
DW GG++CPCHGS +D SGR+ G PAPTN+ VPPY+F E L+
Sbjct: 138 PEVAPPDLGPDWQGGFFCPCHGSRFDMSGRVYAGVPAPTNLVVPPYRFLAENRLL 192
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++VVG V F+ SM S A A +EVD++ + GQ +T +WRGKP++I R
Sbjct: 18 ATVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGQLMTVEWRGKPVWILRR 77
>gi|402583450|gb|EJW77394.1| ubiquinol-cytochrome c reductase iron-sulfur subunit, partial
[Wuchereria bancrofti]
Length = 192
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 9/150 (6%)
Query: 2 LAHSDIRTPDFSKYRRDRNPDKGQEETQ------RKAFTYMIAGGSSVVGMVCAKSVVNQ 55
LAHS IR PD + R +P K T+ R+ Y I G + ++ A +V
Sbjct: 44 LAHSCIRFPDINNRRIITDPTKAASSTEDMRRSIRQGVIYGIGGA---IYLMMATKLVQT 100
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
+ + +D +A+ T ++L+ I EGQ TFKWRGKPLF++HRT+ EI+ +N + +L
Sbjct: 101 AVRFKNMPSDQVALGTTRINLDEIHEGQCKTFKWRGKPLFVKHRTKAEIEEARNVKLCEL 160
Query: 116 RDPQADSDRVKDPSWLVIIGICTHLGCVPI 145
RDP+ DS RVK P WL++I +C HLGCVP+
Sbjct: 161 RDPEEDSARVKRPEWLILIAVCPHLGCVPL 190
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 195 LAHSDIRTPDFSKYRRDRNPDKGQEETQ------RKAFTYMIAGGSSVVGMVCAKSVVNQ 248
LAHS IR PD + R +P K T+ R+ Y I G + ++ A +V
Sbjct: 44 LAHSCIRFPDINNRRIITDPTKAASSTEDMRRSIRQGVIYGIGGA---IYLMMATKLVQT 100
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ + +D +A+ T ++L+ I EGQ TFKWRGKPLF++HR
Sbjct: 101 AVRFKNMPSDQVALGTTRINLDEIHEGQCKTFKWRGKPLFVKHR 144
>gi|333755425|gb|AEF97521.1| Rieske iron-sulfur protein [Hylobittacus apicalis]
Length = 72
Score = 127 bits (319), Expect = 5e-27, Method: Composition-based stats.
Identities = 55/72 (76%), Positives = 62/72 (86%)
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
PEG+SVTFKWRGKPLFIRHRT KEIDTE +S LRDPQ DS+R + P WLV+IG+CTH
Sbjct: 1 PEGKSVTFKWRGKPLFIRHRTGKEIDTENAVPLSALRDPQQDSERAQKPEWLVVIGVCTH 60
Query: 140 LGCVPIANAGDW 151
LGCVPIANAGD+
Sbjct: 61 LGCVPIANAGDF 72
Score = 48.1 bits (113), Expect = 0.004, Method: Composition-based stats.
Identities = 19/20 (95%), Positives = 20/20 (100%)
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
PEG+SVTFKWRGKPLFIRHR
Sbjct: 1 PEGKSVTFKWRGKPLFIRHR 20
>gi|333755259|gb|AEF97438.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755261|gb|AEF97439.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755263|gb|AEF97440.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755265|gb|AEF97441.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755267|gb|AEF97442.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755271|gb|AEF97444.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755273|gb|AEF97445.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755275|gb|AEF97446.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755277|gb|AEF97447.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755279|gb|AEF97448.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755281|gb|AEF97449.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755283|gb|AEF97450.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755285|gb|AEF97451.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755287|gb|AEF97452.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755289|gb|AEF97453.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755291|gb|AEF97454.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755293|gb|AEF97455.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755295|gb|AEF97456.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755297|gb|AEF97457.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755299|gb|AEF97458.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755301|gb|AEF97459.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755303|gb|AEF97460.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755305|gb|AEF97461.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755309|gb|AEF97463.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755311|gb|AEF97464.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755313|gb|AEF97465.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755315|gb|AEF97466.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755317|gb|AEF97467.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755319|gb|AEF97468.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755321|gb|AEF97469.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755323|gb|AEF97470.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755325|gb|AEF97471.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755327|gb|AEF97472.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755329|gb|AEF97473.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755331|gb|AEF97474.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755333|gb|AEF97475.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755335|gb|AEF97476.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755337|gb|AEF97477.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755339|gb|AEF97478.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755341|gb|AEF97479.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755343|gb|AEF97480.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755345|gb|AEF97481.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755347|gb|AEF97482.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755349|gb|AEF97483.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755351|gb|AEF97484.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755353|gb|AEF97485.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755355|gb|AEF97486.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755357|gb|AEF97487.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755359|gb|AEF97488.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755361|gb|AEF97489.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755363|gb|AEF97490.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755365|gb|AEF97491.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755367|gb|AEF97492.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755369|gb|AEF97493.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755371|gb|AEF97494.1| Rieske iron-sulfur protein [Drosophila melanogaster]
gi|333755373|gb|AEF97495.1| Rieske iron-sulfur protein [Drosophila mauritiana]
gi|333755375|gb|AEF97496.1| Rieske iron-sulfur protein [Drosophila simulans]
gi|333755377|gb|AEF97497.1| Rieske iron-sulfur protein [Drosophila simulans]
gi|333755379|gb|AEF97498.1| Rieske iron-sulfur protein [Drosophila simulans]
gi|333755381|gb|AEF97499.1| Rieske iron-sulfur protein [Drosophila simulans]
gi|333755383|gb|AEF97500.1| Rieske iron-sulfur protein [Drosophila simulans]
gi|333755385|gb|AEF97501.1| Rieske iron-sulfur protein [Drosophila santomea]
gi|333755387|gb|AEF97502.1| Rieske iron-sulfur protein [Drosophila teissieri]
gi|333755389|gb|AEF97503.1| Rieske iron-sulfur protein [Drosophila yakuba]
gi|333755391|gb|AEF97504.1| Rieske iron-sulfur protein [Drosophila orena]
Length = 64
Score = 127 bits (318), Expect = 8e-27, Method: Composition-based stats.
Identities = 52/61 (85%), Positives = 55/61 (90%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 P 173
P
Sbjct: 64 P 64
>gi|47211755|emb|CAG06236.1| unnamed protein product [Tetraodon nigroviridis]
Length = 180
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/104 (57%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
AH+DIR PDFS YRR D N Q R+ F+Y++ G ++VVG+ AK+VV QF+
Sbjct: 77 FAHTDIRIPDFSDYRRPEVLDPNKSSQQSSDSRRTFSYLLTGATTVVGVYAAKTVVTQFV 136
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQ 101
SSMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHRT+
Sbjct: 137 SSMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTE 180
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
AH+DIR PDFS YRR D N Q R+ F+Y++ G ++VVG+ AK+VV QF+
Sbjct: 77 FAHTDIRIPDFSDYRRPEVLDPNKSSQQSSDSRRTFSYLLTGATTVVGVYAAKTVVTQFV 136
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLA++ IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 137 SSMSASADVLALSKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 178
>gi|333755269|gb|AEF97443.1| Rieske iron-sulfur protein [Drosophila melanogaster]
Length = 64
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 54/61 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+ D RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG
Sbjct: 4 STLRDPETDDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 63
Query: 173 P 173
P
Sbjct: 64 P 64
>gi|77163833|ref|YP_342358.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus oceani ATCC 19707]
gi|254436195|ref|ZP_05049702.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus oceani AFC27]
gi|76882147|gb|ABA56828.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus oceani ATCC 19707]
gi|207089306|gb|EDZ66578.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus oceani AFC27]
Length = 201
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 23/179 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ ++VVG V F+ SM S A A +EVD++ + G +T +WRGKP+
Sbjct: 13 FLTAATTVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGHIMTVEWRGKPV 72
Query: 95 FIRHRTQKEIDT-EQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGC 142
+I RTQ+E+++ E T LRDP ++ + R +P LV++GICTHLGC
Sbjct: 73 WILRRTQEELESVEAMTGEDILRDPHSEVEEQQPPFAQNVYRSIEPEILVVVGICTHLGC 132
Query: 143 VPIAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
P DW GG++CPCHGS +D SGR+ G PAPTN+EVPPY+F E L
Sbjct: 133 SPTFRPEVAPEDLGPDWQGGFFCPCHGSRFDLSGRVYDGVPAPTNLEVPPYRFLAENRL 191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ ++VVG V F+ SM S A A +EVD++ + G +T +WRGKP+
Sbjct: 13 FLTAATTVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGHIMTVEWRGKPV 72
Query: 288 FIRHR 292
+I R
Sbjct: 73 WILRR 77
>gi|333755307|gb|AEF97462.1| Rieske iron-sulfur protein [Drosophila melanogaster]
Length = 64
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 51/61 (83%), Positives = 54/61 (88%)
Query: 113 SQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
S LRDP+AD RV P WLV+IG+CTHLGCVPIANAGDWGGYYCPCHGSHYD SGRIRKG
Sbjct: 4 STLRDPEADDQRVIKPEWLVVIGVCTHLGCVPIANAGDWGGYYCPCHGSHYDPSGRIRKG 63
Query: 173 P 173
P
Sbjct: 64 P 64
>gi|53803976|ref|YP_114395.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylococcus capsulatus str. Bath]
gi|53757737|gb|AAU92028.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylococcus capsulatus str. Bath]
Length = 198
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 108/192 (56%), Gaps = 26/192 (13%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 81
+G + +R+ T ++++G V A V F+ SM SA A A ++VD+ +
Sbjct: 3 EGVDSEKRRFLTQ----AATMIGAVSAGMVAVPFVGSMQPSAKAQAAGAPVDVDITKLEP 58
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-DSDRVK---------DPSWL 131
GQ + WRGKP++I RTQ+E+D LRDP + +SD+ K P
Sbjct: 59 GQLIRVLWRGKPVWILRRTQQELDRLATLGEDVLRDPLSKESDQPKAATNVVRAIKPEVF 118
Query: 132 VIIGICTHLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVP 181
V IG+CTHLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAP N+++P
Sbjct: 119 VAIGVCTHLGCAPTFRPDVAPADLGSDWPGGFFCPCHGSRFDLAGRVFKGVPAPKNLDIP 178
Query: 182 PYQF-GDEGILI 192
PY++ D ILI
Sbjct: 179 PYKYLSDSRILI 190
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 274
+G + +R+ T ++++G V A V F+ SM SA A A ++VD+ +
Sbjct: 3 EGVDSEKRRFLTQ----AATMIGAVSAGMVAVPFVGSMQPSAKAQAAGAPVDVDITKLEP 58
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ + WRGKP++I R
Sbjct: 59 GQLIRVLWRGKPVWILRR 76
>gi|374263234|ref|ZP_09621786.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
drancourtii LLAP12]
gi|363536496|gb|EHL29938.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Legionella
drancourtii LLAP12]
Length = 205
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 106/178 (59%), Gaps = 26/178 (14%)
Query: 34 TYMIAGGSSVVGMVCAKS-VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGK 92
T + GG VG +CA + +V+ ++ S A AD A ++VDL+ + G+ WRGK
Sbjct: 26 TTCVLGG---VGALCALTPLVSSWLPSAKAQAD---GAPVQVDLSKMEPGEQAVVAWRGK 79
Query: 93 PLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDPSWLVIIGICTHLGC 142
P++I RT + + + N QLRDPQ+ + R +P +LV+IGICTHLGC
Sbjct: 80 PVWIIRRTSAMLQ-KLSQNSPQLRDPQSLTAQQPAYAQNEYRSINPEYLVLIGICTHLGC 138
Query: 143 VP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
P + + G DW GG++CPCHGS +D SGR+ KG PAP NMEVPPY F D+ ++
Sbjct: 139 SPKYKPSLGDLGPDWPGGFFCPCHGSTFDLSGRVFKGVPAPINMEVPPYYFIDKHTIV 196
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 227 TYMIAGGSSVVGMVCAKS-VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGK 285
T + GG VG +CA + +V+ ++ S A AD A ++VDL+ + G+ WRGK
Sbjct: 26 TTCVLGG---VGALCALTPLVSSWLPSAKAQAD---GAPVQVDLSKMEPGEQAVVAWRGK 79
Query: 286 PLFIRHR 292
P++I R
Sbjct: 80 PVWIIRR 86
>gi|15677875|ref|NP_275043.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis MC58]
gi|121635711|ref|YP_975956.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis FAM18]
gi|161869139|ref|YP_001598305.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis 053442]
gi|194099697|ref|YP_002002832.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae NCCP11945]
gi|218767375|ref|YP_002341887.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis Z2491]
gi|240013166|ref|ZP_04720079.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae DGI18]
gi|240015608|ref|ZP_04722148.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae FA6140]
gi|240120237|ref|ZP_04733199.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID24-1]
gi|254492755|ref|ZP_05105926.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae 1291]
gi|254804137|ref|YP_003082358.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha14]
gi|268595697|ref|ZP_06129864.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae 35/02]
gi|268597883|ref|ZP_06132050.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae FA19]
gi|268600131|ref|ZP_06134298.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae MS11]
gi|268600344|ref|ZP_06134511.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID18]
gi|268602576|ref|ZP_06136743.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID1]
gi|268681124|ref|ZP_06147986.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID332]
gi|268685197|ref|ZP_06152059.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae SK-92-679]
gi|268685605|ref|ZP_06152467.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae SK-93-1035]
gi|291044858|ref|ZP_06570567.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae DGI2]
gi|293397936|ref|ZP_06642142.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
gonorrhoeae F62]
gi|304388678|ref|ZP_07370738.1| ubiquinol-cytochrome c reductase [Neisseria meningitidis ATCC
13091]
gi|385324990|ref|YP_005879429.1| ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein; RISP) [Neisseria meningitidis 8013]
gi|385329301|ref|YP_005883604.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha710]
gi|385336639|ref|YP_005890586.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae TCDC-NG08107]
gi|385337222|ref|YP_005891095.1| ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein; RISP) [Neisseria meningitidis WUE
2594]
gi|385340900|ref|YP_005894772.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis G2136]
gi|385341104|ref|YP_005894975.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240149]
gi|385852134|ref|YP_005898649.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M04-240196]
gi|385854097|ref|YP_005900611.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis H44/76]
gi|385856061|ref|YP_005902574.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240355]
gi|385858015|ref|YP_005904527.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NZ-05/33]
gi|416165276|ref|ZP_11607400.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis N1568]
gi|416174866|ref|ZP_11609345.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis OX99.30304]
gi|416180137|ref|ZP_11611322.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M6190]
gi|416185085|ref|ZP_11613317.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M13399]
gi|416189360|ref|ZP_11615273.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M0579]
gi|416193687|ref|ZP_11617243.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis ES14902]
gi|416198654|ref|ZP_11619021.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis CU385]
gi|416208921|ref|ZP_11621194.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 961-5945]
gi|416214916|ref|ZP_11623172.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240013]
gi|418289217|ref|ZP_12901582.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM233]
gi|418291462|ref|ZP_12903462.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM220]
gi|421539026|ref|ZP_15985197.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 93003]
gi|421541314|ref|ZP_15987440.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 93004]
gi|421543307|ref|ZP_15989402.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM255]
gi|421545381|ref|ZP_15991444.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM140]
gi|421547430|ref|ZP_15993465.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM183]
gi|421549463|ref|ZP_15995476.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2781]
gi|421551574|ref|ZP_15997562.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 69166]
gi|421553615|ref|ZP_15999574.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM576]
gi|421555703|ref|ZP_16001629.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 98008]
gi|421558026|ref|ZP_16003920.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 80179]
gi|421560011|ref|ZP_16005876.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 92045]
gi|421562088|ref|ZP_16007924.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2657]
gi|421564154|ref|ZP_16009963.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2795]
gi|421566423|ref|ZP_16012173.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3081]
gi|421567890|ref|ZP_16013621.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3001]
gi|421907849|ref|ZP_16337717.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha704]
gi|427828158|ref|ZP_18995176.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis H44/76]
gi|433466037|ref|ZP_20423505.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM422]
gi|433468052|ref|ZP_20425499.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 87255]
gi|433470201|ref|ZP_20427606.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 98080]
gi|433472384|ref|ZP_20429760.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 68094]
gi|433474382|ref|ZP_20431734.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97021]
gi|433476484|ref|ZP_20433815.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 88050]
gi|433478610|ref|ZP_20435916.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 70012]
gi|433480782|ref|ZP_20438059.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63041]
gi|433482811|ref|ZP_20440062.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2006087]
gi|433484826|ref|ZP_20442040.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2002038]
gi|433487057|ref|ZP_20444244.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97014]
gi|433489231|ref|ZP_20446377.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M13255]
gi|433491412|ref|ZP_20448521.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM418]
gi|433493495|ref|ZP_20450576.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM586]
gi|433495546|ref|ZP_20452604.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM762]
gi|433497617|ref|ZP_20454642.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M7089]
gi|433499662|ref|ZP_20456663.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M7124]
gi|433501731|ref|ZP_20458710.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM174]
gi|433503909|ref|ZP_20460860.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM126]
gi|433506021|ref|ZP_20462949.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 9506]
gi|433508047|ref|ZP_20464941.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 9757]
gi|433510206|ref|ZP_20467060.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 12888]
gi|433512259|ref|ZP_20469068.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 4119]
gi|433514374|ref|ZP_20471156.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63049]
gi|433516632|ref|ZP_20473390.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2004090]
gi|433518577|ref|ZP_20475312.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 96023]
gi|433520738|ref|ZP_20477446.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 65014]
gi|433522751|ref|ZP_20479430.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 61103]
gi|433524899|ref|ZP_20481551.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97020]
gi|433527152|ref|ZP_20483769.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 69096]
gi|433529159|ref|ZP_20485764.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3652]
gi|433531334|ref|ZP_20487911.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3642]
gi|433533368|ref|ZP_20489924.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2007056]
gi|433535495|ref|ZP_20492020.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2001212]
gi|433537661|ref|ZP_20494152.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 77221]
gi|433539817|ref|ZP_20496281.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 70030]
gi|433541929|ref|ZP_20498367.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63006]
gi|7227315|gb|AAF42373.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis MC58]
gi|120867417|emb|CAM11189.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis FAM18]
gi|121051383|emb|CAM07675.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis Z2491]
gi|161594692|gb|ABX72352.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis 053442]
gi|193934987|gb|ACF30811.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae NCCP11945]
gi|226511795|gb|EEH61140.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae 1291]
gi|254667679|emb|CBA03521.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha14]
gi|254671212|emb|CBA08398.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha153]
gi|254673758|emb|CBA09435.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha275]
gi|261393377|emb|CAX51013.1| ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein; RISP) [Neisseria meningitidis 8013]
gi|268549086|gb|EEZ44504.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae 35/02]
gi|268551671|gb|EEZ46690.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae FA19]
gi|268584262|gb|EEZ48938.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae MS11]
gi|268584475|gb|EEZ49151.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID18]
gi|268586707|gb|EEZ51383.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID1]
gi|268621408|gb|EEZ53808.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae PID332]
gi|268625481|gb|EEZ57881.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae SK-92-679]
gi|268625889|gb|EEZ58289.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae SK-93-1035]
gi|291011752|gb|EFE03748.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae DGI2]
gi|291611882|gb|EFF40951.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
gonorrhoeae F62]
gi|304337345|gb|EFM03519.1| ubiquinol-cytochrome c reductase [Neisseria meningitidis ATCC
13091]
gi|308390152|gb|ADO32472.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha710]
gi|316983941|gb|EFV62920.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis H44/76]
gi|317165182|gb|ADV08723.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
gonorrhoeae TCDC-NG08107]
gi|319409636|emb|CBY89936.1| ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein; RISP) [Neisseria meningitidis WUE
2594]
gi|325127331|gb|EGC50266.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis N1568]
gi|325129371|gb|EGC52206.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis OX99.30304]
gi|325131296|gb|EGC54007.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M6190]
gi|325133379|gb|EGC56044.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M13399]
gi|325135284|gb|EGC57905.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M0579]
gi|325137325|gb|EGC59913.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis ES14902]
gi|325139376|gb|EGC61916.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis CU385]
gi|325141412|gb|EGC63891.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 961-5945]
gi|325143610|gb|EGC65930.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240013]
gi|325199144|gb|ADY94600.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis G2136]
gi|325201101|gb|ADY96556.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis H44/76]
gi|325201310|gb|ADY96764.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240149]
gi|325205002|gb|ADZ00456.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M01-240355]
gi|325206957|gb|ADZ02410.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M04-240196]
gi|325208904|gb|ADZ04356.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NZ-05/33]
gi|372199789|gb|EHP13975.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM220]
gi|372200060|gb|EHP14196.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM233]
gi|389606805|emb|CCA45716.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha522]
gi|393291047|emb|CCI73725.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
meningitidis alpha704]
gi|402314837|gb|EJU50405.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 93004]
gi|402314953|gb|EJU50520.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM255]
gi|402315138|gb|EJU50704.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 93003]
gi|402320740|gb|EJU56221.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM183]
gi|402320928|gb|EJU56408.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM140]
gi|402323170|gb|EJU58616.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2781]
gi|402327079|gb|EJU62475.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 69166]
gi|402327435|gb|EJU62823.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM576]
gi|402328995|gb|EJU64359.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 98008]
gi|402333197|gb|EJU68508.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 80179]
gi|402334096|gb|EJU69390.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 92045]
gi|402335477|gb|EJU70742.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2657]
gi|402339085|gb|EJU74306.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM2795]
gi|402340336|gb|EJU75538.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3081]
gi|402342835|gb|EJU77991.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3001]
gi|432200239|gb|ELK56336.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM422]
gi|432200735|gb|ELK56824.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 98080]
gi|432200963|gb|ELK57050.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 87255]
gi|432206337|gb|ELK62346.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 68094]
gi|432207038|gb|ELK63033.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97021]
gi|432207342|gb|ELK63332.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 88050]
gi|432212890|gb|ELK68821.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 70012]
gi|432213200|gb|ELK69125.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63041]
gi|432214131|gb|ELK70038.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2006087]
gi|432219063|gb|ELK74911.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2002038]
gi|432220042|gb|ELK75869.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97014]
gi|432220161|gb|ELK75986.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M13255]
gi|432225164|gb|ELK80917.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM418]
gi|432225555|gb|ELK81296.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM586]
gi|432227115|gb|ELK82827.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM762]
gi|432231556|gb|ELK87215.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M7089]
gi|432232345|gb|ELK87990.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis M7124]
gi|432232732|gb|ELK88368.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM174]
gi|432238183|gb|ELK93759.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM126]
gi|432238545|gb|ELK94111.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 9506]
gi|432238629|gb|ELK94194.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 9757]
gi|432244450|gb|ELK99938.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 12888]
gi|432244758|gb|ELL00241.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 4119]
gi|432245336|gb|ELL00806.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63049]
gi|432250818|gb|ELL06198.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2004090]
gi|432251097|gb|ELL06469.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 96023]
gi|432251354|gb|ELL06723.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 65014]
gi|432257266|gb|ELL12569.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 61103]
gi|432257401|gb|ELL12701.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 97020]
gi|432257969|gb|ELL13261.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 69096]
gi|432263513|gb|ELL18730.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3652]
gi|432263784|gb|ELL18995.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis NM3642]
gi|432264682|gb|ELL19881.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2007056]
gi|432269085|gb|ELL24248.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 2001212]
gi|432270410|gb|ELL25548.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 77221]
gi|432270862|gb|ELL25995.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 70030]
gi|432275000|gb|ELL30078.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
meningitidis 63006]
Length = 193
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQLLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ + N +L DP +D++ R P+ LV IGICT
Sbjct: 67 WQGKPIWVLNRTDQQLKDLKGLN-GELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVP-----IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P IA A DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFDLAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQLLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVLNR 77
>gi|300113109|ref|YP_003759684.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus watsonii C-113]
gi|299539046|gb|ADJ27363.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Nitrosococcus watsonii C-113]
Length = 201
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/179 (40%), Positives = 99/179 (55%), Gaps = 23/179 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ ++VVG V F+ SM S A A +EVD++ + G +T +WRGKP+
Sbjct: 13 FLTAATTVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGHIMTVEWRGKPV 72
Query: 95 FIRHRTQKEIDT-EQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGC 142
+I RT +E+++ E T LRDPQ++ + R P LV+IGICTHLGC
Sbjct: 73 WILRRTPEELESIEALTEEDILRDPQSEVESQQPPFAENIYRSIKPELLVVIGICTHLGC 132
Query: 143 VPIAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
P DW GG++CPCHGS +D SGR+ G PAPTN+EVPPY+F E L
Sbjct: 133 SPSFRPEVAPEDLGPDWQGGFFCPCHGSRFDLSGRVYDGVPAPTNLEVPPYRFLAENRL 191
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ ++VVG V F+ SM S A A +EVD++ + G +T +WRGKP+
Sbjct: 13 FLTAATTVVGGVGMGFTAVPFVKSMQPSERAQAAGAPVEVDISNLEPGHIMTVEWRGKPV 72
Query: 288 FIRHR 292
+I R
Sbjct: 73 WILRR 77
>gi|157145520|ref|YP_001452839.1| hypothetical protein CKO_01263 [Citrobacter koseri ATCC BAA-895]
gi|157082725|gb|ABV12403.1| hypothetical protein CKO_01263 [Citrobacter koseri ATCC BAA-895]
Length = 183
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 4/159 (2%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
+ VG + V IS++ +A ++V L + GQ+V W+GK + I HR
Sbjct: 23 TKFVGAAGVTAAVWPLISALGPDDKTVAENEPVDVSLAGVAVGQTVKRVWQGKLILIHHR 82
Query: 100 TQKEIDTEQNTNISQLRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCP 157
T +EI + Q ++ + DPQAD +R+K P WLVI G C H GCVP A G G+ CP
Sbjct: 83 TPEEIRSAQQADVHRFIDPQADGERIKTEYPQWLVIQGYCPHAGCVPNAKPGG-QGWVCP 141
Query: 158 CHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLA 196
CHGS +D SGR+ +GPA N+ +P Y F +G+ +R+ A
Sbjct: 142 CHGSEFDTSGRVTRGPATANLAIPDYAFHPDGLTVRIGA 180
>gi|455642337|gb|EMF21503.1| hypothetical protein H262_17911 [Citrobacter freundii GTC 09479]
Length = 183
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
+S++S L I+V L + GQ++ W+GK + I HRTQ+EI +NT+
Sbjct: 38 LVSALSPDEKTLGENEPIDVSLAGVAAGQTIRRIWQGKLILIHHRTQEEIVAARNTDWHT 97
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+DS+RV P WLV+ G C H GCVP A G G + CPCHGS +D SGR+ +G
Sbjct: 98 LIDPQSDSERVSAVHPQWLVVQGYCPHAGCVPNAQPGGLG-WICPCHGSEFDTSGRVTRG 156
Query: 173 PAPTNMEVPPYQFGDEGILIRM 194
PA N+ +P Y F +G ++R+
Sbjct: 157 PATANLAIPDYAFHSDGQIVRI 178
>gi|395227649|ref|ZP_10405975.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citrobacter
sp. A1]
gi|421844320|ref|ZP_16277478.1| hypothetical protein D186_04770 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|424728647|ref|ZP_18157252.1| ubiquinol-cytochrome c iron-sulfur subunit [Citrobacter sp. L17]
gi|394718977|gb|EJF24598.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citrobacter
sp. A1]
gi|411774475|gb|EKS57965.1| hypothetical protein D186_04770 [Citrobacter freundii ATCC 8090 =
MTCC 1658]
gi|422896518|gb|EKU36300.1| ubiquinol-cytochrome c iron-sulfur subunit [Citrobacter sp. L17]
Length = 183
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 4/142 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
+S++S L I+V L + GQ++ W+GK + I HRTQ+EI +N +
Sbjct: 38 LVSALSPDEKTLGENEPIDVSLAGVAAGQTIRRIWQGKLILIHHRTQEEIVAARNADWHT 97
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+DS+RV P WLV+ G C H GCVP A G G + CPCHGS +D SGR+ +G
Sbjct: 98 LIDPQSDSERVSAVHPQWLVVQGYCPHAGCVPNAQPGGLG-WICPCHGSEFDTSGRVTRG 156
Query: 173 PAPTNMEVPPYQFGDEGILIRM 194
PA TN+ +P Y F +G ++R+
Sbjct: 157 PATTNLAIPDYAFHSDGQIVRI 178
>gi|121996991|ref|YP_001001778.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Halorhodospira halophila SL1]
gi|121588396|gb|ABM60976.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Halorhodospira halophila SL1]
Length = 205
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 23/190 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G +SVVG V A FI + S + A A IEVD++ + GQ + F+W+G P+
Sbjct: 16 FLTGAASVVGGVGAVFAAVPFIGFLRPSVEAQAEGAPIEVDVSKLEPGQRLEFEWKGSPI 75
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ RT++ ++T + + +LRDP ++ D R DP V++ ICTHLGC+P
Sbjct: 76 WVVSRTEEHLET-LDKMVDRLRDPDSERDQQPEYARNKHRSVDPEVFVVVPICTHLGCIP 134
Query: 145 IANA--------GDW-GGYYCPCHGSHYDASGRI-RKGPAPTNMEVPPY-QFGDEGILIR 193
DW GG++CPCHG+ YD +GR+ R PAPTN+EVPP+ Q GD+ ++
Sbjct: 135 TYYPEIEPMDFDADWLGGFFCPCHGARYDMAGRVYRAQPAPTNLEVPPHRQDGDKLVIGE 194
Query: 194 MLAHSDIRTP 203
+D+ P
Sbjct: 195 HPEDADMSDP 204
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ G +SVVG V A FI + S + A A IEVD++ + GQ + F+W+G P+
Sbjct: 16 FLTGAASVVGGVGAVFAAVPFIGFLRPSVEAQAEGAPIEVDVSKLEPGQRLEFEWKGSPI 75
Query: 288 FIRHR 292
++ R
Sbjct: 76 WVVSR 80
>gi|59802337|ref|YP_209049.1| PetA [Neisseria gonorrhoeae FA 1090]
gi|59719232|gb|AAW90637.1| putative ubiquinol--cytochrome c reductase iron-sulfur subunit
[Neisseria gonorrhoeae FA 1090]
Length = 193
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A + A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---SGAAVEVDVSKIEAGQLLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ + N +L DP +D++ R P+ LV IGICT
Sbjct: 67 WQGKPIWVLNRTDQQLKDLKGLN-GELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVP-----IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P IA A DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFDLAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A + A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---SGAAVEVDVSKIEAGQLLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVLNR 77
>gi|333982409|ref|YP_004511619.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylomonas
methanica MC09]
gi|333806450|gb|AEF99119.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Methylomonas
methanica MC09]
Length = 199
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 110/191 (57%), Gaps = 26/191 (13%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 81
+G + ++R+ T + SVVG V A + F+S M SA +A A +EVDL+ +
Sbjct: 4 EGVDTSKRQFLTSAL----SVVGAVGAGYLAVPFLSQMQPSAKAMAAGAPVEVDLSKMES 59
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWL 131
GQ + WRGKP+++ +RT + I T + S+L DP ++ R P
Sbjct: 60 GQLIRVAWRGKPVWVLNRTPEVISTLSTLD-SKLADPMSNESVQPEYSKNALRSIKPEIF 118
Query: 132 VIIGICTHLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVP 181
V +G+CTHLGC P ++ G DW GG++CPCHGS +D +GR+ +G PAPTN+EVP
Sbjct: 119 VAVGLCTHLGCSPTFRPEIAPSDLGPDWKGGFFCPCHGSWFDLAGRVYRGVPAPTNLEVP 178
Query: 182 PYQFGDEGILI 192
PY++ + ++I
Sbjct: 179 PYRYVKDTLII 189
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 274
+G + ++R+ T + SVVG V A + F+S M SA +A A +EVDL+ +
Sbjct: 4 EGVDTSKRQFLTSAL----SVVGAVGAGYLAVPFLSQMQPSAKAMAAGAPVEVDLSKMES 59
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ + WRGKP+++ +R
Sbjct: 60 GQLIRVAWRGKPVWVLNR 77
>gi|340382296|ref|XP_003389656.1| PREDICTED: ubiquinol-cytochrome c reductase iron-sulfur
subunit-like [Amphimedon queenslandica]
Length = 232
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 112/202 (55%), Gaps = 26/202 (12%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-A 70
F+K D++ + +R+ T ++VVG V A + F S+ S A+ A
Sbjct: 29 FAKDAGDQSMSNATDNPRRRFLT----NAATVVGGVGAAFAIWPFASAWQPSERAKAIGA 84
Query: 71 TIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA---------- 120
++VD+ + G +T KWRGKP++I RTQ+ IDT + Q+RDP +
Sbjct: 85 PVDVDIAKLEPGARITVKWRGKPVWIVRRTQETIDTLAALD-GQMRDPDSAVPQQPDYAR 143
Query: 121 DSDRVKDPSWLVIIGICTHLGCVPI-------ANAGDW-GGYYCPCHGSHYDASGRIRKG 172
+ R P LV+IG+CTHLGC P A DW GG++CPCHGS +D +GR+ +G
Sbjct: 144 NRHRSIKPEILVLIGLCTHLGCAPSHVKQGEGALGADWKGGFFCPCHGSRFDYAGRVYQG 203
Query: 173 -PAPTNMEVPPYQF-GDEGILI 192
PAPTN+EVPP+++ D I+I
Sbjct: 204 VPAPTNLEVPPHRYLSDTRIII 225
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 190 ILIRMLAHSDIRTPDFSKYRR------DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAK 243
I++ L IR F+ RR D++ + +R+ T ++VVG V A
Sbjct: 8 IILARLGRDGIRLLRFAGPRRFAKDAGDQSMSNATDNPRRRFLT----NAATVVGGVGAA 63
Query: 244 SVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+ F S+ S A+ A ++VD+ + G +T KWRGKP++I R
Sbjct: 64 FAIWPFASAWQPSERAKAIGAPVDVDIAKLEPGARITVKWRGKPVWIVRR 113
>gi|255068218|ref|ZP_05320073.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sicca ATCC 29256]
gi|255047560|gb|EET43024.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sicca ATCC 29256]
Length = 193
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEIDVSKIESGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N + DP +D+D R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKSLN-GAVADPNSDADQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
+L+
Sbjct: 186 TTVLV 190
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEIDVSKIESGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|383317459|ref|YP_005378301.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Frateuria
aurantia DSM 6220]
gi|379044563|gb|AFC86619.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Frateuria
aurantia DSM 6220]
Length = 201
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 96/157 (61%), Gaps = 22/157 (14%)
Query: 56 FISSMSASADVLAMAT-IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F SM SA ++A ++VDL I + Q VT+ WRG+P+F+ HR+ +++ Q + +
Sbjct: 32 FAESMQPSARARSLAAPVQVDLAGIAQEQMVTYAWRGQPVFVVHRSARQLALLQKHD-DR 90
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVP--IANAG------DW-GGYY 155
L DP + D R + P+WLV++G+CTHLGCVP + + G DW GG++
Sbjct: 91 LLDPDSKVDQQPAWARNPHRSQRPAWLVLVGLCTHLGCVPDYVGSLGREPFDPDWPGGFF 150
Query: 156 CPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CPCH S YD +GR+ G PAP N+ VPPY+F D+G L
Sbjct: 151 CPCHKSRYDLAGRVYSGVPAPRNLLVPPYRFLDDGRL 187
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAMAT-IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F SM SA ++A ++VDL I + Q VT+ WRG+P+F+ HR
Sbjct: 32 FAESMQPSARARSLAAPVQVDLAGIAQEQMVTYAWRGQPVFVVHR 76
>gi|399994515|ref|YP_006574755.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400756059|ref|YP_006564427.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Phaeobacter
gallaeciensis 2.10]
gi|398655212|gb|AFO89182.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Phaeobacter
gallaeciensis 2.10]
gi|398659070|gb|AFO93036.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 186
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 101/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+++I VD++ + G ++ + GKP+FIR RT++EI+ + ++++L
Sbjct: 34 LVNQMNPSADVQALSSIIVDVSGVEVGTQLSVMFLGKPVFIRRRTEEEIEEARAVDLAEL 93
Query: 116 RDPQ-----------ADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D Q +D +R D + WLV++G+CTHLGCVP+ + AGD+ G++CPCHGS
Sbjct: 94 PDQQDRNANKPGLDASDENRTLDDAGEWLVMMGVCTHLGCVPLGDGAGDFNGWFCPCHGS 153
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD +GRIRKGPAP N+ VP +F DE
Sbjct: 154 HYDTAGRIRKGPAPENLPVPAAEFIDE 180
>gi|340361268|ref|ZP_08683699.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
macacae ATCC 33926]
gi|339888827|gb|EGQ78256.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
macacae ATCC 33926]
Length = 193
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N + DP +D+D R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKSLN-GAVADPNSDADQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
+L+
Sbjct: 186 TTVLV 190
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|261400813|ref|ZP_05986938.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
lactamica ATCC 23970]
gi|313667618|ref|YP_004047902.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
lactamica 020-06]
gi|421863150|ref|ZP_16294850.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|269209419|gb|EEZ75874.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
lactamica ATCC 23970]
gi|309379272|emb|CBX22045.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005080|emb|CBN86512.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
lactamica 020-06]
Length = 193
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 105/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQLLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N +L DP +D++ R P+ LV IGICT
Sbjct: 67 WQGKPIWVLNRTDQQLKDLKSLN-GELTDPNSDAEQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI-------ANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P A+ G W GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTFRPDIAPADLGSAWKGGFFCPCHGSKFDLAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQLLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVLNR 77
>gi|344939953|ref|ZP_08779241.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacter tundripaludum SV96]
gi|344261145|gb|EGW21416.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylobacter tundripaludum SV96]
Length = 199
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 113/192 (58%), Gaps = 26/192 (13%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
+KG ++++R+ T + +VVG V + F++ M SA +A A +EVD++ +
Sbjct: 3 NKGVDQSKRQFLTSAL----TVVGAVGTGYLAVPFLAQMQPSAKAMAAGAPVEVDISKME 58
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP------QADSD----RVKDPSW 130
GQ + WRGKP++I +RT + ++T + + S+LRDP Q +S R P
Sbjct: 59 PGQLIRVAWRGKPVWILNRTPQVLETLKTLD-SELRDPLSQESIQPESSKNPARSIKPEV 117
Query: 131 LVIIGICTHLGCVPI-------ANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEV 180
V +G+CTHLGC P + GD W GG++CPCHGS +D +GR+ +G PAPTN+E+
Sbjct: 118 FVAVGLCTHLGCSPTFRPEIAPTDLGDKWHGGFFCPCHGSWFDLAGRVYRGVPAPTNLEI 177
Query: 181 PPYQFGDEGILI 192
PPY++ + LI
Sbjct: 178 PPYRYITDTQLI 189
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 273
+KG ++++R+ T + +VVG V + F++ M SA +A A +EVD++ +
Sbjct: 3 NKGVDQSKRQFLTSAL----TVVGAVGTGYLAVPFLAQMQPSAKAMAAGAPVEVDISKME 58
Query: 274 EGQSVTFKWRGKPLFIRHR 292
GQ + WRGKP++I +R
Sbjct: 59 PGQLIRVAWRGKPVWILNR 77
>gi|261379358|ref|ZP_05983931.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
subflava NJ9703]
gi|284797798|gb|EFC53145.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
subflava NJ9703]
Length = 193
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 23/184 (12%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEID---------TEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
W+GKP+++ +RT +++ T+ N+ + Q + + R P+ LV IGICTH
Sbjct: 67 WQGKPIWLVNRTDQQLKDLKSLNGAVTDPNSEVDQQPEYAKNEHRSIKPNLLVAIGICTH 126
Query: 140 LGCVP-----IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDE 188
LGC P IA A DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 127 LGCSPTYRPDIAPADLGADWKGGFFCPCHGSKFDIAGRVYKGVPAPTNLVVPPYKYLSDT 186
Query: 189 GILI 192
+L+
Sbjct: 187 TVLV 190
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWLVNR 77
>gi|241760217|ref|ZP_04758313.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
flavescens SK114]
gi|241319328|gb|EER55793.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
flavescens SK114]
Length = 193
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 103/184 (55%), Gaps = 23/184 (12%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEID---------TEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
W+GKP+++ +RT +++ T+ N+ + Q + + R P+ LV IGICTH
Sbjct: 67 WQGKPIWLVNRTDQQLKDLKSLDGAVTDPNSEVDQQPEYAKNEHRSIKPNLLVAIGICTH 126
Query: 140 LGCVP-----IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDE 188
LGC P IA A DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 127 LGCSPTYRPDIAPADLGADWKGGFFCPCHGSKFDIAGRVYKGVPAPTNLVVPPYKYLSDT 186
Query: 189 GILI 192
+L+
Sbjct: 187 TVLV 190
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWLVNR 77
>gi|319639021|ref|ZP_07993779.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
mucosa C102]
gi|317399925|gb|EFV80588.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Neisseria
mucosa C102]
Length = 193
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 103/184 (55%), Gaps = 23/184 (12%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEID---------TEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
W+GKP+++ +RT +++ T+ N+ + Q + + R P+ LV IGICTH
Sbjct: 67 WQGKPIWLVNRTDQQLKDLKSLDGSVTDPNSEVDQQPEYAKNEHRSIKPNLLVAIGICTH 126
Query: 140 LGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDE 188
LGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 127 LGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSDT 186
Query: 189 GILI 192
+L+
Sbjct: 187 TVLV 190
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWLVNR 77
>gi|296314558|ref|ZP_06864499.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
polysaccharea ATCC 43768]
gi|296838685|gb|EFH22623.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
polysaccharea ATCC 43768]
Length = 193
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 102/185 (55%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N +L DP +D + R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKSLN-GELTDPNSDVEQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI---------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P AG GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDIAPADLGAGWKGGFFCPCHGSKFDIAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|420368364|ref|ZP_14869125.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Shigella
flexneri 1235-66]
gi|391322388|gb|EIQ79075.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Shigella
flexneri 1235-66]
Length = 183
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 7/171 (4%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 85
+TQR+ + + VG + V IS++ +A ++V L + GQ+V
Sbjct: 12 QTQRRDCLCKL---TKFVGAAGVTAAVWPLISALGPDDKTVAENEPVDVSLAGVTAGQTV 68
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGCV 143
W+GK + IRHRT +EI + ++ L DPQADS+RV P WLV+ G C H GCV
Sbjct: 69 KRIWQGKLILIRHRTAEEIAAARQADLRLLADPQADSERVAAAHPQWLVVQGYCPHAGCV 128
Query: 144 PIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILIRM 194
P AN + G+ CPCHGS +D SGR+ +GPA N+ +P + +G+ +R+
Sbjct: 129 PNANP-NGQGWVCPCHGSEFDTSGRVTRGPATANLAIPDFSVSADGLSLRI 178
>gi|349608775|ref|ZP_08888195.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sp. GT4A_CT1]
gi|348610443|gb|EGY60135.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sp. GT4A_CT1]
Length = 193
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEIDVSKIESGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N + DP +D D R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKSLN-GAVADPNSDVDHQPENCKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
+L+
Sbjct: 186 TTVLV 190
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEIDVSKIESGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|114321360|ref|YP_743043.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227754|gb|ABI57553.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Alkalilimnicola ehrlichii MLHE-1]
Length = 199
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 103/179 (57%), Gaps = 23/179 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
++ G ++VVG V V FI SA LA A +EVD + + EGQ + +WRG+P+
Sbjct: 13 ILTGAATVVGGVGLAFTVTPFIKYWQPSARALAAGAPVEVDHSKLGEGQLLNVEWRGQPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGCV 143
F+ RT++++ QN +LRDP ++ + R +DP +LV++G+CTHLGC
Sbjct: 73 FVVRRTEEQLAELQNVR-GRLRDPDSEVEEQQPEYARNEHRSRDPEFLVVVGVCTHLGCS 131
Query: 144 PIANAG--------DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
P DW GG++C CH S +D +GR+ +G PAPTN+ VP Y+F ++ ++
Sbjct: 132 PGYYPELQAQPFDPDWRGGFFCGCHASRFDIAGRVFQGVPAPTNLVVPRYKFTEQNTIL 190
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
++ G ++VVG V V FI SA LA A +EVD + + EGQ + +WRG+P+
Sbjct: 13 ILTGAATVVGGVGLAFTVTPFIKYWQPSARALAAGAPVEVDHSKLGEGQLLNVEWRGQPV 72
Query: 288 FIRHR 292
F+ R
Sbjct: 73 FVVRR 77
>gi|87120441|ref|ZP_01076335.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Marinomonas
sp. MED121]
gi|86164084|gb|EAQ65355.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Marinomonas
sp. MED121]
Length = 197
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 22/178 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G +S +G V A + F++S + SA A A ++VD++ + GQ + +WRG+P+
Sbjct: 13 FLVGATSAIGAVGAVGIATPFVASWNPSAKAKAAGAPVKVDISKLEVGQQMIVEWRGQPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ R+Q+ ++ N +L DP ++ D R P V++GICTHLGC P
Sbjct: 73 WVVKRSQETLEN-LNKIADELSDPSSEKDQQPSYAQNEYRSIKPEIAVLLGICTHLGCSP 131
Query: 145 IAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
W GGY+CPCHGS +D +GR+ KG PAP N+EVPPYQF + +++
Sbjct: 132 TYRPELSPEDLGPKWVGGYFCPCHGSRFDLAGRVYKGVPAPINLEVPPYQFLSDNVIL 189
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ G +S +G V A + F++S + SA A A ++VD++ + GQ + +WRG+P+
Sbjct: 13 FLVGATSAIGAVGAVGIATPFVASWNPSAKAKAAGAPVKVDISKLEVGQQMIVEWRGQPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVKR 77
>gi|393760721|ref|ZP_10349527.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393161041|gb|EJC61109.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 214
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 26/190 (13%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ R+ + V G+ A V+ F S A A A A +EVD++ I G+ T
Sbjct: 21 DPSRRTWVATACALGGVAGVATAVPFVSSFAPSEKAKA---AGAPVEVDISSIAPGEMRT 77
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIG 135
+WRGKP++I HRTQ+++D + SQL DP +D R + P + IG
Sbjct: 78 VEWRGKPVWILHRTQEQLDALPKLD-SQLADPDSDRPGYTPAYAKNEYRSRRPEIFICIG 136
Query: 136 ICTHLGCVPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQ 184
ICTHLGC P + G W GG+ CPCHGS +D +GR+ PAP N+E+PPY+
Sbjct: 137 ICTHLGCSPTPHLAAGAGPGLPGGWEGGFLCPCHGSTFDLAGRVYSNKPAPDNLEIPPYE 196
Query: 185 FGDEGILIRM 194
F +G+++ +
Sbjct: 197 FSADGMMVTI 206
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ R+ + V G+ A V+ F S A A A A +EVD++ I G+ T
Sbjct: 21 DPSRRTWVATACALGGVAGVATAVPFVSSFAPSEKAKA---AGAPVEVDISSIAPGEMRT 77
Query: 280 FKWRGKPLFIRHR 292
+WRGKP++I HR
Sbjct: 78 VEWRGKPVWILHR 90
>gi|386815399|ref|ZP_10102617.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiothrix
nivea DSM 5205]
gi|386419975|gb|EIJ33810.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiothrix
nivea DSM 5205]
Length = 200
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 107/190 (56%), Gaps = 23/190 (12%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQ 83
+ T K ++ G+SVVG A ++ F++S S SA LA A +E+D++ + GQ
Sbjct: 3 NDNTVNKGRRRLLIAGTSVVGAAGAAAIAAPFLTSWSPSARALAAGAPVEMDVSKVEPGQ 62
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDPSWLV 132
V WRGKP+++ +RT+ E+ +N LRDP + + R ++P +LV
Sbjct: 63 QVRIIWRGKPVWVVNRTE-EMLANLPSNDPNLRDPASTVAEQQPAYAQNPHRSRNPKYLV 121
Query: 133 IIGICTHLGCVPIAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPP 182
++GICTHLGC P +W GG+YCPCHGS +D +GR+ K PA TN+ VPP
Sbjct: 122 LVGICTHLGCSPTYRPEVAPEDLGAEWKGGWYCPCHGSRFDLAGRVYKNVPAATNLVVPP 181
Query: 183 YQFGDEGILI 192
Y + D+ ++
Sbjct: 182 YFYKDDTTIL 191
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQ 276
+ T K ++ G+SVVG A ++ F++S S SA LA A +E+D++ + GQ
Sbjct: 3 NDNTVNKGRRRLLIAGTSVVGAAGAAAIAAPFLTSWSPSARALAAGAPVEMDVSKVEPGQ 62
Query: 277 SVTFKWRGKPLFIRHR 292
V WRGKP+++ +R
Sbjct: 63 QVRIIWRGKPVWVVNR 78
>gi|270158041|ref|ZP_06186698.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Legionella
longbeachae D-4968]
gi|289163691|ref|YP_003453829.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Legionella
longbeachae NSW150]
gi|269990066|gb|EEZ96320.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Legionella
longbeachae D-4968]
gi|288856864|emb|CBJ10675.1| putative ubiquinol--cytochrome c reductase, iron-sulfur subunit
[Legionella longbeachae NSW150]
Length = 205
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 107/185 (57%), Gaps = 23/185 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 85
+T+R+ F + +SV+G + A + F++S SA A A ++VDL+ + G+
Sbjct: 19 DTERRRF---LVATTSVLGGIGALCALTPFVASWLPSAKAQAAGAPVQVDLSKLEPGEQA 75
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDPSWLVIIG 135
+WRGKP++I RT E+ + N S LRDP + + R +P +LV+IG
Sbjct: 76 VVEWRGKPVWIIRRT-AEMLQQITKNSSLLRDPHSLTAQQPHYAKNEYRSINPEYLVLIG 134
Query: 136 ICTHLGCVP-----IANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGD 187
ICTHLGC P ++ G +W GG++CPCHGS +D SGR+ K PAP N+EVP Y F D
Sbjct: 135 ICTHLGCSPKYKPNLSELGPNWPGGFFCPCHGSTFDLSGRVFKDVPAPINLEVPSYYFID 194
Query: 188 EGILI 192
E ++
Sbjct: 195 EHTIV 199
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 278
+T+R+ F + +SV+G + A + F++S SA A A ++VDL+ + G+
Sbjct: 19 DTERRRF---LVATTSVLGGIGALCALTPFVASWLPSAKAQAAGAPVQVDLSKLEPGEQA 75
Query: 279 TFKWRGKPLFIRHR 292
+WRGKP++I R
Sbjct: 76 VVEWRGKPVWIIRR 89
>gi|92117641|ref|YP_577370.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
hamburgensis X14]
gi|91800535|gb|ABE62910.1| Ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrobacter
hamburgensis X14]
Length = 219
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 99/178 (55%), Gaps = 25/178 (14%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQSVTFK 88
R+ F Y+ ++ VG V + + IS + LA +E+DL+ + GQ V+ +
Sbjct: 20 RRDFLYI---ATAAVGTVGVAAAIVPMISQLEPDKATLAAGGPVELDLSQVQPGQQVSVR 76
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNI-SQLRDPQADS----------DRVKDPSWLVIIGIC 137
WR P+ + +R+ + T Q+ + +QL DPQ+ R +P + V +GIC
Sbjct: 77 WRDHPILVINRSDAALKTLQDPKLLAQLSDPQSSEFQQPEYAHNWHRSANPEYGVFVGIC 136
Query: 138 THLGCVPI------AN--AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
THLGC+P+ AN A DW GGY+CPCHGS YD +GR+ G PAP N+ VPPY+F
Sbjct: 137 THLGCIPLYYPSPNANHPASDWLGGYFCPCHGSKYDLAGRVFSGVPAPYNLPVPPYRF 194
>gi|357404002|ref|YP_004915926.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Methylomicrobium
alcaliphilum 20Z]
gi|351716667|emb|CCE22329.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Methylomicrobium
alcaliphilum 20Z]
Length = 199
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 26/191 (13%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 81
+G ++++R+ T + +VVG V + F++ M S +A A + VD++ +
Sbjct: 4 EGVDKSKRQFLTSAL----TVVGAVGTGYIAVPFLAQMQPSTKAMAAGAPVTVDISKMEP 59
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDPSWL 131
GQ + WRGKP+++ +RT + ++T + + QLRDPQ+ + R P
Sbjct: 60 GQLIRVAWRGKPVWLLNRTPEVLETLKTLD-DQLRDPQSSESIQPVYTKNPTRALKPEIF 118
Query: 132 VIIGICTHLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVP 181
V +G+CTHLGC P A+ G DW GG++CPCHGS +D +GR+ +G PAPTN+E+P
Sbjct: 119 VAVGLCTHLGCSPTFRPEIAPADLGPDWKGGFFCPCHGSWFDLAGRVFRGVPAPTNLEIP 178
Query: 182 PYQFGDEGILI 192
PY++ E +I
Sbjct: 179 PYRYISETQII 189
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 216 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPE 274
+G ++++R+ T + +VVG V + F++ M S +A A + VD++ +
Sbjct: 4 EGVDKSKRQFLTSAL----TVVGAVGTGYIAVPFLAQMQPSTKAMAAGAPVTVDISKMEP 59
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ + WRGKP+++ +R
Sbjct: 60 GQLIRVAWRGKPVWLLNR 77
>gi|261378656|ref|ZP_05983229.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
cinerea ATCC 14685]
gi|269144995|gb|EEZ71413.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
cinerea ATCC 14685]
Length = 193
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ ++ N ++ DP +D + R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKSLN-GEVADPNSDVEQQPEYAKNETRSIKPNILVAIGICT 125
Query: 139 HLGCVPI---------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P AG GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDIAPADLGAGWKGGFFCPCHGSKFDIAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|253995699|ref|YP_003047763.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylotenera mobilis JLW8]
gi|253982378|gb|ACT47236.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylotenera mobilis JLW8]
Length = 231
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 108/190 (56%), Gaps = 24/190 (12%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEG 82
G + ++ ++IA +S VG + +V F+ SM+ S A A +EVD++ I G
Sbjct: 36 GCSQVDQEKRNFLIA--TSAVGALGCAAVAVPFVKSMTPSERAKAAGAPVEVDISKIEPG 93
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD-----------SDRVKDPSWL 131
+T +WRGKP++I +RT+ E+ E + QL DP +D R P+
Sbjct: 94 TMMTAEWRGKPVWIINRTE-EMTAELAQHDGQLSDPASDVTSQQPAYCKNEGRSIKPNLA 152
Query: 132 VIIGICTHLGCVP---IANAGD----W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPP 182
VI+GICTHLGC P + GD W GG++CPCHGS +D +GR+ KG PAP N+ VPP
Sbjct: 153 VIVGICTHLGCSPSGKLQKGGDMGDGWTGGFFCPCHGSKFDLAGRVFKGSPAPINLVVPP 212
Query: 183 YQFGDEGILI 192
+++ E +L+
Sbjct: 213 HKYLSENLLL 222
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEG 275
G + ++ ++IA +S VG + +V F+ SM+ S A A +EVD++ I G
Sbjct: 36 GCSQVDQEKRNFLIA--TSAVGALGCAAVAVPFVKSMTPSERAKAAGAPVEVDISKIEPG 93
Query: 276 QSVTFKWRGKPLFIRHR 292
+T +WRGKP++I +R
Sbjct: 94 TMMTAEWRGKPVWIINR 110
>gi|381150314|ref|ZP_09862183.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylomicrobium album BG8]
gi|380882286|gb|EIC28163.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylomicrobium album BG8]
Length = 199
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 108/192 (56%), Gaps = 26/192 (13%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
+KG ++++R+ T + +VVG V + F++ M S +A A +EVD+ +
Sbjct: 3 NKGVDKSKRQFLTSAL----TVVGAVGTGYLAVPFLAQMQPSVKAMAAGAPVEVDIGKME 58
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSW 130
GQ + WRGKP++I RT + + T + + ++LRDP ++ R P
Sbjct: 59 LGQLLRVAWRGKPVWILKRTPEVLATLKTLD-NELRDPLSEESIQPEYSKNLYRSLKPEI 117
Query: 131 LVIIGICTHLGCVPI-------ANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEV 180
V IGICTHLGC P + GD W GG++CPCHGS +D +GR+ +G PAPTN+E+
Sbjct: 118 FVAIGICTHLGCSPTFRPEIAPVDLGDKWKGGFFCPCHGSWFDLAGRVYRGVPAPTNLEI 177
Query: 181 PPYQFGDEGILI 192
PPY++ E LI
Sbjct: 178 PPYRYVTENQLI 189
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 273
+KG ++++R+ T + +VVG V + F++ M S +A A +EVD+ +
Sbjct: 3 NKGVDKSKRQFLTSAL----TVVGAVGTGYLAVPFLAQMQPSVKAMAAGAPVEVDIGKME 58
Query: 274 EGQSVTFKWRGKPLFIRHR 292
GQ + WRGKP++I R
Sbjct: 59 LGQLLRVAWRGKPVWILKR 77
>gi|424775885|ref|ZP_18202873.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Alcaligenes
sp. HPC1271]
gi|422888764|gb|EKU31148.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Alcaligenes
sp. HPC1271]
Length = 214
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 26/190 (13%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ R+ + V G+ A V+ F S A A A A +EVD++ I GQ T
Sbjct: 21 DPSRRTWVATACALGGVAGVATAVPFVSSFAPSEKAKA---AGAPVEVDISSIAPGQMRT 77
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIG 135
+WRGKP++I HRT++++D + SQL DP +D R + P + IG
Sbjct: 78 VEWRGKPVWILHRTKEQLDALPKLD-SQLADPDSDRPGYTPAYAKNEYRSRRPEIFICIG 136
Query: 136 ICTHLGCVPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQ 184
ICTHLGC P + G W GG+ CPCHGS +D +GR+ PAP N+E+PPY+
Sbjct: 137 ICTHLGCSPTPHLAAGAGAGLPGGWEGGFLCPCHGSTFDLAGRVYSNKPAPDNLEIPPYE 196
Query: 185 FGDEGILIRM 194
F +G ++ +
Sbjct: 197 FSADGTMVTI 206
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ R+ + V G+ A V+ F S A A A A +EVD++ I GQ T
Sbjct: 21 DPSRRTWVATACALGGVAGVATAVPFVSSFAPSEKAKA---AGAPVEVDISSIAPGQMRT 77
Query: 280 FKWRGKPLFIRHR 292
+WRGKP++I HR
Sbjct: 78 VEWRGKPVWILHR 90
>gi|347760844|ref|YP_004868405.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Gluconacetobacter xylinus NBRC 3288]
gi|347579814|dbj|BAK84035.1| ubiquinol-cytochrome c reductase iron-sulfur subunit
[Gluconacetobacter xylinus NBRC 3288]
Length = 223
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 96/169 (56%), Gaps = 19/169 (11%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNIS-Q 114
F+ S++ A ++VD++ +P GQ + W+G+P+FI HRT + + + Q+T ++ +
Sbjct: 51 FLQSLAPRDSAAAHLPVDVDISALPPGQQIVVTWQGRPVFITHRTPEALASLQDTALTAR 110
Query: 115 LRDPQ----------ADSDRVKDPSWLVIIGICTHLGCVPI------ANAGDWGGYYCPC 158
LRD Q A+ R DP + V++GICTHLGCVP N GGY CPC
Sbjct: 111 LRDGQSRDLQQPPYAANWHRSIDPRYGVVVGICTHLGCVPAYRPTPEGNGSTAGGYACPC 170
Query: 159 HGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILIRMLAHSDIRTPDFS 206
HGS +D +GR+ +G PAP N+ VPPY LIR+ + + DFS
Sbjct: 171 HGSRFDLAGRVFRGAPAPYNLPVPPYSMPSP-TLIRLGENPTGQEFDFS 218
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S++ A ++VD++ +P GQ + W+G+P+FI HR
Sbjct: 51 FLQSLAPRDSAAAHLPVDVDISALPPGQQIVVTWQGRPVFITHR 94
>gi|419797182|ref|ZP_14322679.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sicca VK64]
gi|385698598|gb|EIG28950.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
sicca VK64]
Length = 193
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/185 (38%), Positives = 103/185 (55%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT++++ + N + DP +D D R P+ LV IGICT
Sbjct: 67 WQGKPIWVVNRTEQQLKDLKGLN-GAVADPNSDVDHQPENCKNETRSIKPNILVTIGICT 125
Query: 139 HLGCVP-----IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P IA A DW GG+YCPCHGS +D +GR+ K PAPTN+ VPP+++ D
Sbjct: 126 HLGCSPTFRPDIAPADLGADWKGGFYCPCHGSKFDMAGRVYKSVPAPTNLVVPPHKYMSD 185
Query: 188 EGILI 192
IL+
Sbjct: 186 TTILV 190
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|225077122|ref|ZP_03720321.1| hypothetical protein NEIFLAOT_02175 [Neisseria flavescens
NRL30031/H210]
gi|224951533|gb|EEG32742.1| hypothetical protein NEIFLAOT_02175 [Neisseria flavescens
NRL30031/H210]
Length = 193
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 102/184 (55%), Gaps = 23/184 (12%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEID---------TEQNTNISQLRDPQADSDRVKDPSWLVIIGICTH 139
W+GKP+++ +RT +++ T+ N+ + + + R P+ LV IGICTH
Sbjct: 67 WQGKPIWLVNRTDQQLKDLKSLDGAVTDPNSEVDHQPENCKNETRSIKPNLLVAIGICTH 126
Query: 140 LGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDE 188
LGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 127 LGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSDT 186
Query: 189 GILI 192
+L+
Sbjct: 187 TVLV 190
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +EVD++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAAVEVDVSKIEAGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWLVNR 77
>gi|406941995|gb|EKD74347.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [uncultured
bacterium]
Length = 201
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 103/190 (54%), Gaps = 22/190 (11%)
Query: 23 KGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT-IEVDLNLIPE 81
K +EE ++ ++V G+ A + V FIS S D A A I+VD++ I
Sbjct: 4 KNKEEIDLARRCFLRRATTTVGGIGLAAASV-PFISYWLPSKDTEAFAAPIKVDISAIQP 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWL 131
Q +T WRG+P++I RT+ +DT I QLRDP + D R P W
Sbjct: 63 KQQLTIPWRGQPIWIIRRTEDMLDTLPKL-IQQLRDPDSKEDQQPAYAKNEYRSIKPEWY 121
Query: 132 VIIGICTHLGCVPIAN------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
+ IG+CTHLGC+P + +W GG+YCPCHGS YD +GR+ KG PAP N+++P Y
Sbjct: 122 IAIGVCTHLGCIPNYRPDPGGISPEWLGGFYCPCHGSSYDLAGRVYKGVPAPLNLKIPRY 181
Query: 184 QF-GDEGILI 192
+ D ILI
Sbjct: 182 MYLSDTEILI 191
>gi|414162798|ref|ZP_11419045.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Afipia felis
ATCC 53690]
gi|410880578|gb|EKS28418.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Afipia felis
ATCC 53690]
Length = 217
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 105/184 (57%), Gaps = 25/184 (13%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNLIPEGQSVTFK 88
R+ F Y++ ++ G+V + + +S M+ A LA +++DL+ + GQ V +
Sbjct: 18 RRDFLYVV---TATFGLVGGFATLVPMLSQMNPDASTLAAGGPVDLDLSKMEPGQQVVVR 74
Query: 89 WRGKPLFIRHRTQKEIDTEQNTN-ISQLRDPQADS----------DRVKDPSWLVIIGIC 137
W+ P+F+ R K + Q+ I+QL DPQ++ R +P + V++GIC
Sbjct: 75 WQDHPVFVTRRPPKLLQGLQDPKLIAQLADPQSEEAQQPPYAQNWHRSANPEYGVVVGIC 134
Query: 138 THLGCVPI----ANAGD----W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGD 187
THLGC+P+ AN + W GGY+CPCHGS YD +GR+ +G PAP N+ VPPY+F +
Sbjct: 135 THLGCIPLFYPDANPSEPVQGWLGGYFCPCHGSKYDLAGRVFRGVPAPYNLPVPPYRFVN 194
Query: 188 EGIL 191
+ L
Sbjct: 195 DTTL 198
>gi|332286360|ref|YP_004418271.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Pusillimonas
sp. T7-7]
gi|330430313|gb|AEC21647.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Pusillimonas
sp. T7-7]
Length = 214
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 99/183 (54%), Gaps = 25/183 (13%)
Query: 35 YMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKP 93
+ +A +V G + V F+SS + S A A +EVD++ I GQ +T +WRGKP
Sbjct: 26 FWVASACAVGGAAGVATAV-PFVSSFAPSEKARAAGAPVEVDISNIAPGQMITVEWRGKP 84
Query: 94 LFIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGC 142
++I HRT ++ T+ +L DPQ+D R ++P V +GICTHLGC
Sbjct: 85 VWIMHRTDAQL-AGLKTHEDELADPQSDRPGFTPEYAKNEYRSREPELFVCVGICTHLGC 143
Query: 143 VPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
P DW GG++CPCHGS++D +GR+ PAP N+EVPPY + +G
Sbjct: 144 SPSPAFETGPQPGLPSDWAGGFFCPCHGSYFDLAGRVYSNKPAPDNLEVPPYTYSADGSH 203
Query: 192 IRM 194
I +
Sbjct: 204 ITI 206
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 228 YMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKP 286
+ +A +V G + V F+SS + S A A +EVD++ I GQ +T +WRGKP
Sbjct: 26 FWVASACAVGGAAGVATAV-PFVSSFAPSEKARAAGAPVEVDISNIAPGQMITVEWRGKP 84
Query: 287 LFIRHR 292
++I HR
Sbjct: 85 VWIMHR 90
>gi|387131149|ref|YP_006294039.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Methylophaga
sp. JAM7]
gi|386272438|gb|AFJ03352.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Methylophaga
sp. JAM7]
Length = 198
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 28/182 (15%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ +SVVG A +V F+SS+ SA A A + VD++ + GQ +T +WRGKP+
Sbjct: 12 FLTAAASVVGGAGAIAVAVPFVSSIKPSAKAQAAGAPVLVDISQLETGQLLTVEWRGKPV 71
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD-PSW------------LVIIGICTHLG 141
+I R++ +D + S LRDP DS + K P + +V++GICTHLG
Sbjct: 72 WIYRRSEDVLDALATLDES-LRDP--DSSKAKQQPDYCENETRSIREEVMVLVGICTHLG 128
Query: 142 CVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDEGI 190
C P A+ G +W GG++CPCHGS +D +GR+ +G PAP N+EVPPY F GD +
Sbjct: 129 CSPTYRPELAPADLGSEWKGGFFCPCHGSKFDLAGRVYQGVPAPINLEVPPYHFQGDNTV 188
Query: 191 LI 192
++
Sbjct: 189 IV 190
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ +SVVG A +V F+SS+ SA A A + VD++ + GQ +T +WRGKP+
Sbjct: 12 FLTAAASVVGGAGAIAVAVPFVSSIKPSAKAQAAGAPVLVDISQLETGQLLTVEWRGKPV 71
Query: 288 FIRHR 292
+I R
Sbjct: 72 WIYRR 76
>gi|297537512|ref|YP_003673281.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylotenera versatilis 301]
gi|297256859|gb|ADI28704.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Methylotenera versatilis 301]
Length = 212
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 114/205 (55%), Gaps = 33/205 (16%)
Query: 18 DRNPDKGQEETQRKAFT--------YMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
D + DK Q +Q ++ ++IA S+V + CA + V FI SM+ S A
Sbjct: 3 DNHSDKHQAGSQSESSASVDQEKRKFLIAT-SAVGALGCAAAAV-PFIVSMTPSERAKAA 60
Query: 70 -ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD------- 121
A +EVD++ I G+ +T +WRGKP++I +RT E+ E + +L DP +D
Sbjct: 61 GAPVEVDISKIAPGEMMTTEWRGKPVWIINRTD-EMTAELTKHNDKLSDPNSDVTSQQPS 119
Query: 122 ----SDRVKDPSWLVIIGICTHLGCVPIA------NAGD-W-GGYYCPCHGSHYDASGRI 169
R P+ VI+GICTHLGC P A + GD W GG+ CPCHGS +D +GR+
Sbjct: 120 YCKNPSRAIKPNLAVIVGICTHLGCSPSAKLQPKGDMGDSWTGGFSCPCHGSKFDLAGRV 179
Query: 170 RKG-PAPTNMEVPPYQF-GDEGILI 192
KG PAP N+ VPPY++ D +LI
Sbjct: 180 LKGSPAPINLVVPPYKYLADNTLLI 204
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 211 DRNPDKGQEETQRKAFT--------YMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 262
D + DK Q +Q ++ ++IA S+V + CA + V FI SM+ S A
Sbjct: 3 DNHSDKHQAGSQSESSASVDQEKRKFLIAT-SAVGALGCAAAAV-PFIVSMTPSERAKAA 60
Query: 263 -ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A +EVD++ I G+ +T +WRGKP++I +R
Sbjct: 61 GAPVEVDISKIAPGEMMTTEWRGKPVWIINR 91
>gi|359796728|ref|ZP_09299322.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Achromobacter
arsenitoxydans SY8]
gi|359365320|gb|EHK67023.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Achromobacter
arsenitoxydans SY8]
Length = 213
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 103/188 (54%), Gaps = 27/188 (14%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAVPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDP 128
P G T +WRGKP++I HR+ +++ + + SQL DPQ+ + R + P
Sbjct: 71 PVGAMKTVEWRGKPVWILHRSPEQLAGLKTLD-SQLADPQSQRPGFTPAYAENEGRSRKP 129
Query: 129 SWLVIIGICTHLGCVPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTN 177
V +GICTHLGC P ++ DW GG+ CPCHGS +D +GR+ K PAP N
Sbjct: 130 EIFVCVGICTHLGCSPTSHFETGGGGGLGADWQGGFLCPCHGSTFDLAGRVFKNKPAPDN 189
Query: 178 MEVPPYQF 185
+EVPPYQ+
Sbjct: 190 LEVPPYQY 197
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAVPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
P G T +WRGKP++I HR
Sbjct: 71 PVGAMKTVEWRGKPVWILHR 90
>gi|387126518|ref|YP_006295123.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Methylophaga
sp. JAM1]
gi|386273580|gb|AFI83478.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Methylophaga
sp. JAM1]
Length = 197
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 100/160 (62%), Gaps = 26/160 (16%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+SS++ SA A A +++D++ + GQ +T +WRGKP+++ RT + ++T + +
Sbjct: 32 FVSSVAPSAKAEAAGAPVQIDISQLELGQLLTVEWRGKPVWVFRRTTEVLETLPTLD-DE 90
Query: 115 LRDPQADSDRVKDPSW------------LVIIGICTHLGCVPI-------ANAGD-W-GG 153
LRDPQ S+ + P + +V++GICTHLGC P A+ GD W GG
Sbjct: 91 LRDPQ--SEVAQQPEYCQNETRSIRDEIMVMVGICTHLGCSPTYRPEIAPADLGDDWKGG 148
Query: 154 YYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
++CPCHGS +D +GR+ +G PAPTN+EVPPY F + I+I
Sbjct: 149 FFCPCHGSRFDMAGRVYQGVPAPTNLEVPPYHFQGDNIVI 188
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+SS++ SA A A +++D++ + GQ +T +WRGKP+++ R
Sbjct: 32 FVSSVAPSAKAEAAGAPVQIDISQLELGQLLTVEWRGKPVWVFRR 76
>gi|399117070|emb|CCG19884.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Taylorella
asinigenitalis 14/45]
Length = 213
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 103/185 (55%), Gaps = 25/185 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
M+ G + +G V + + F++SM+ S A A +EVD++ I G + +W+GKP+
Sbjct: 28 MLLGTACAIGGVATLATLVPFVASMTPSDRARAAGAPVEVDISQIAPGTMIAVEWQGKPV 87
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGCV 143
+I HRT + I++ + T + DP+++ R + W V +GICTHLGC
Sbjct: 88 WILHRTPEMIESLKATE-DLVADPKSERPGYTPEYAKNQYRSRKDQWFVCVGICTHLGCS 146
Query: 144 PIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEG-IL 191
P + + DW GGY CPCHGSH+D +GR+ K PAP N+ VPPY F D+ IL
Sbjct: 147 PSSRLKDGNAEGMSSDWKGGYLCPCHGSHFDLAGRVFKNQPAPDNLLVPPYYFVDDTHIL 206
Query: 192 IRMLA 196
+ + A
Sbjct: 207 VGLEA 211
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
M+ G + +G V + + F++SM+ S A A +EVD++ I G + +W+GKP+
Sbjct: 28 MLLGTACAIGGVATLATLVPFVASMTPSDRARAAGAPVEVDISQIAPGTMIAVEWQGKPV 87
Query: 288 FIRHR 292
+I HR
Sbjct: 88 WILHR 92
>gi|429212988|ref|ZP_19204153.1| putative iron-sulfur protein [Pseudomonas sp. M1]
gi|428157470|gb|EKX04018.1| putative iron-sulfur protein [Pseudomonas sp. M1]
Length = 196
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 90/158 (56%), Gaps = 22/158 (13%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+ S SA A A ++V++ I GQ V +WRGKP+F+ HRT++ +D SQ
Sbjct: 33 FVGSWFPSAKAKAAGAPVKVNVGKIEPGQQVIAEWRGKPVFLVHRTKEMLDALPTLE-SQ 91
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI-------ANAG-DW-GGYY 155
L DP++ + R P VI+GICTHLGC P A+ G DW GGY+
Sbjct: 92 LADPESKASEQPTYVDPKLRSIKPELAVIVGICTHLGCSPTFRPEVAPADLGPDWKGGYF 151
Query: 156 CPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
CPCHGSHYD +GR+ KG PAP N+ +PPY + + I
Sbjct: 152 CPCHGSHYDLAGRVYKGQPAPLNLPIPPYSLDGDVLTI 189
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S SA A A ++V++ I GQ V +WRGKP+F+ HR
Sbjct: 33 FVGSWFPSAKAKAAGAPVKVNVGKIEPGQQVIAEWRGKPVFLVHR 77
>gi|424944804|ref|ZP_18360567.1| probable iron-sulfur protein [Pseudomonas aeruginosa NCMG1179]
gi|346061250|dbj|GAA21133.1| probable iron-sulfur protein [Pseudomonas aeruginosa NCMG1179]
Length = 192
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 22/157 (14%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+ S SA A A ++V++ I GQ + +WRGKP+FI HRT++ +D + Q
Sbjct: 28 FVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEMLDALPSLE-GQ 86
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI-------ANAG-DW-GGYY 155
L DP + + R P VI+GICTHLGC P A+ G DW GGY+
Sbjct: 87 LADPDSKASEQPEYVDPKLRSIKPELAVIVGICTHLGCSPTFRPEVAPADLGPDWKGGYF 146
Query: 156 CPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CPCHGSHYD +GR+ KG PAP N+ +PPY F + ++
Sbjct: 147 CPCHGSHYDLAGRVYKGQPAPLNLPIPPYTFDADDVI 183
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S SA A A ++V++ I GQ + +WRGKP+FI HR
Sbjct: 28 FVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHR 72
>gi|330991602|ref|ZP_08315553.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Gluconacetobacter sp. SXCC-1]
gi|329761621|gb|EGG78114.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit
[Gluconacetobacter sp. SXCC-1]
Length = 228
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 97/175 (55%), Gaps = 21/175 (12%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNI-SQ 114
F+ S++ A ++VD++ +P GQ + W+GKP+FI HRT + + Q+ + S+
Sbjct: 54 FLQSLAPRDSAAAHLPVDVDVSALPPGQQIVVTWQGKPVFITHRTPESLAALQDAALTSR 113
Query: 115 LRDPQ----------ADSDRVKDPSWLVIIGICTHLGCVPIANA-------GDW-GGYYC 156
LRD Q A+ R +P + V++G+CTHLGCVP G W GGY C
Sbjct: 114 LRDGQSQDQQQPPYAANWHRSIEPRYGVVVGVCTHLGCVPAYRPLPEGQADGRWPGGYAC 173
Query: 157 PCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILIRMLAHSDIRTPDFSKYRR 210
PCHGS +D +GR+ +G PAP N+ VPPY LIR+ + + DFS R+
Sbjct: 174 PCHGSKFDLAGRVFRGAPAPYNLPVPPYSMPSP-TLIRLGENPAGQVFDFSTIRQ 227
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S++ A ++VD++ +P GQ + W+GKP+FI HR
Sbjct: 54 FLQSLAPRDSAAAHLPVDVDVSALPPGQQIVVTWQGKPVFITHR 97
>gi|348590741|ref|YP_004875203.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Taylorella
asinigenitalis MCE3]
gi|347974645|gb|AEP37180.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Taylorella
asinigenitalis MCE3]
Length = 213
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 25/181 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
M+ G + +G V + + F++SM+ S A A +EVD++ I G + +W+GKP+
Sbjct: 28 MLLGTACAIGGVATLATLVPFVASMTPSDRARAAGAPVEVDISQIAPGTMIAVEWQGKPV 87
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD-----------RVKDPSWLVIIGICTHLGCV 143
+I HRT + I++ + T + DP+++ R + W V +GICTHLGC
Sbjct: 88 WILHRTPEMIESLKATE-DLVADPKSERPGYTPEYAKNQYRSRKDQWFVCVGICTHLGCS 146
Query: 144 PIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEG-IL 191
P + + DW GGY CPCHGSH+D +GR+ K PAP N+ VPPY F D+ IL
Sbjct: 147 PSSRLKDGNAEGMSSDWKGGYLCPCHGSHFDLAGRVFKNQPAPDNLLVPPYYFVDDTHIL 206
Query: 192 I 192
I
Sbjct: 207 I 207
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
M+ G + +G V + + F++SM+ S A A +EVD++ I G + +W+GKP+
Sbjct: 28 MLLGTACAIGGVATLATLVPFVASMTPSDRARAAGAPVEVDISQIAPGTMIAVEWQGKPV 87
Query: 288 FIRHR 292
+I HR
Sbjct: 88 WILHR 92
>gi|15599627|ref|NP_253121.1| iron-sulfur protein [Pseudomonas aeruginosa PAO1]
gi|116052464|ref|YP_792777.1| cytochrome c reductase, iron-sulfur subun [Pseudomonas aeruginosa
UCBPP-PA14]
gi|152989170|ref|YP_001350339.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Pseudomonas
aeruginosa PA7]
gi|218893522|ref|YP_002442391.1| putative iron-sulfur protein [Pseudomonas aeruginosa LESB58]
gi|254238906|ref|ZP_04932229.1| hypothetical protein PACG_05075 [Pseudomonas aeruginosa C3719]
gi|254244758|ref|ZP_04938080.1| hypothetical protein PA2G_05630 [Pseudomonas aeruginosa 2192]
gi|296391140|ref|ZP_06880615.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PAb1]
gi|355650309|ref|ZP_09056009.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
sp. 2_1_26]
gi|386060583|ref|YP_005977105.1| putative iron-sulfur protein [Pseudomonas aeruginosa M18]
gi|392985995|ref|YP_006484582.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa DK2]
gi|416857011|ref|ZP_11912450.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa 138244]
gi|416884556|ref|ZP_11922378.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa 152504]
gi|418583930|ref|ZP_13147996.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|418589696|ref|ZP_13153617.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|419751976|ref|ZP_14278385.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|420141572|ref|ZP_14649247.1| iron-sulfur protein [Pseudomonas aeruginosa CIG1]
gi|421155795|ref|ZP_15615261.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 14886]
gi|421162776|ref|ZP_15621583.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 25324]
gi|421170180|ref|ZP_15628154.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 700888]
gi|421176572|ref|ZP_15634235.1| iron-sulfur protein [Pseudomonas aeruginosa CI27]
gi|421182489|ref|ZP_15639965.1| iron-sulfur protein [Pseudomonas aeruginosa E2]
gi|421518984|ref|ZP_15965657.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PAO579]
gi|452876904|ref|ZP_21954236.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa VRFPA01]
gi|9950664|gb|AAG07819.1|AE004857_10 probable iron-sulfur protein [Pseudomonas aeruginosa PAO1]
gi|115587685|gb|ABJ13700.1| putative cytochrome c reductase, iron-sulfur subun [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126170837|gb|EAZ56348.1| hypothetical protein PACG_05075 [Pseudomonas aeruginosa C3719]
gi|126198136|gb|EAZ62199.1| hypothetical protein PA2G_05630 [Pseudomonas aeruginosa 2192]
gi|150964328|gb|ABR86353.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PA7]
gi|218773750|emb|CAW29564.1| probable iron-sulfur protein [Pseudomonas aeruginosa LESB58]
gi|334834076|gb|EGM13076.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa 152504]
gi|334841087|gb|EGM19724.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa 138244]
gi|347306889|gb|AEO77003.1| putative iron-sulfur protein [Pseudomonas aeruginosa M18]
gi|354826858|gb|EHF11061.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
sp. 2_1_26]
gi|375046409|gb|EHS38970.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa MPAO1/P1]
gi|375051552|gb|EHS44019.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa MPAO1/P2]
gi|384401553|gb|EIE47907.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PADK2_CF510]
gi|392321500|gb|AFM66880.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa DK2]
gi|403245714|gb|EJY59495.1| iron-sulfur protein [Pseudomonas aeruginosa CIG1]
gi|404346389|gb|EJZ72739.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PAO579]
gi|404519972|gb|EKA30681.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 14886]
gi|404524253|gb|EKA34604.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 700888]
gi|404530906|gb|EKA40889.1| iron-sulfur protein [Pseudomonas aeruginosa CI27]
gi|404533382|gb|EKA43212.1| iron-sulfur protein [Pseudomonas aeruginosa ATCC 25324]
gi|404542076|gb|EKA51415.1| iron-sulfur protein [Pseudomonas aeruginosa E2]
gi|452186317|gb|EME13335.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa VRFPA01]
gi|453046231|gb|EME93948.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Pseudomonas
aeruginosa PA21_ST175]
Length = 197
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 90/157 (57%), Gaps = 22/157 (14%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+ S SA A A ++V++ I GQ + +WRGKP+FI HRT++ +D + Q
Sbjct: 33 FVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHRTKEMLDALPSLE-GQ 91
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI-------ANAG-DW-GGYY 155
L DP + + R P VI+GICTHLGC P A+ G DW GGY+
Sbjct: 92 LADPDSKASEQPEYVDPKLRSIKPELAVIVGICTHLGCSPTFRPEVAPADLGPDWKGGYF 151
Query: 156 CPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CPCHGSHYD +GR+ KG PAP N+ +PPY F + ++
Sbjct: 152 CPCHGSHYDLAGRVYKGQPAPLNLPIPPYTFDADDVI 188
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S SA A A ++V++ I GQ + +WRGKP+FI HR
Sbjct: 33 FVGSWFPSAKAKAAGAPVQVNVGKIDPGQQIIAEWRGKPVFIVHR 77
>gi|160871624|ref|ZP_02061756.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Rickettsiella grylli]
gi|159120423|gb|EDP45761.1| ubiquinol-Cytochrome c reductase, iron-sulfur subunit
[Rickettsiella grylli]
Length = 193
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 25/188 (13%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT---IEVDLNLIPEG 82
EE +R+ FT ++A S G A V FI+S+ + + +T +EV+L+ + G
Sbjct: 2 EENRRQLFTVIVALMS---GFGLAAISVVPFIASLQPAIETREQSTQSSVEVNLSHLAPG 58
Query: 83 QSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDPSWLV 132
++ W KP++I RTQ +D + + LRDP + + R +P +L+
Sbjct: 59 HAMVVNWENKPVWIIRRTQTMLDNLWKIH-ALLRDPNSLTAEQPAYTHNEYRSLNPEYLI 117
Query: 133 IIGICTHLGCV----PIAN--AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQ 184
+IG+CTHLGC PI + +W GG+YCPCHGS +D +GR+ K PAPTN+++PPY+
Sbjct: 118 LIGLCTHLGCSAQFKPIQGELSRNWPGGFYCPCHGSRFDLAGRVMKNVPAPTNLKIPPYR 177
Query: 185 FGDEGILI 192
F +E L+
Sbjct: 178 FINEHTLL 185
>gi|333755423|gb|AEF97520.1| Rieske iron-sulfur protein [Panorpa helena]
Length = 66
Score = 117 bits (292), Expect = 9e-24, Method: Composition-based stats.
Identities = 49/66 (74%), Positives = 57/66 (86%)
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
FKWRGKPLFIRHRT KEI+TE+ +S LRD +AD DRV+ P WLV+IG+CTHLGCVPIA
Sbjct: 1 FKWRGKPLFIRHRTGKEIETEKAVPLSALRDAEADEDRVQKPEWLVVIGVCTHLGCVPIA 60
Query: 147 NAGDWG 152
NAGD+G
Sbjct: 61 NAGDFG 66
>gi|329895261|ref|ZP_08270903.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [gamma
proteobacterium IMCC3088]
gi|328922383|gb|EGG29726.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [gamma
proteobacterium IMCC3088]
Length = 198
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/189 (35%), Positives = 100/189 (52%), Gaps = 23/189 (12%)
Query: 26 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQS 84
+ET + +SVVG+ A + F+ S SA A A ++ D++ + GQ
Sbjct: 3 DETLNTGRRRFLTTATSVVGVAGAVGIATPFLGSWQPSAKAKAAGAPVKADISKLEPGQM 62
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ----------ADSDRVKDPSWLVII 134
+ +WRGKP+++ +RTQ+ +D N L+DP + DR P LV+
Sbjct: 63 IVVEWRGKPVYVVNRTQEMLDNLPRLN-DDLKDPDSAISQQPTYISGVDRALRPELLVVE 121
Query: 135 GICTHLGCVP-------IANAGD--W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
G+CTHLGC P A+ G W GG++CPCHGS +D SGR+ G PA TN+ VPPY
Sbjct: 122 GLCTHLGCAPKYRPEVGAADLGGDAWLGGFFCPCHGSKFDLSGRVYAGVPASTNLVVPPY 181
Query: 184 QFGDEGILI 192
F + +L+
Sbjct: 182 SFESDRVLV 190
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 219 EETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQS 277
+ET + +SVVG+ A + F+ S SA A A ++ D++ + GQ
Sbjct: 3 DETLNTGRRRFLTTATSVVGVAGAVGIATPFLGSWQPSAKAKAAGAPVKADISKLEPGQM 62
Query: 278 VTFKWRGKPLFIRHR 292
+ +WRGKP+++ +R
Sbjct: 63 IVVEWRGKPVYVVNR 77
>gi|254479997|ref|ZP_05093245.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [marine gamma
proteobacterium HTCC2148]
gi|214039559|gb|EEB80218.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [marine gamma
proteobacterium HTCC2148]
Length = 198
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 23/159 (14%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+ S + SA A A ++ D+ + GQ V +WRGKP+++ HRT ++D N S
Sbjct: 33 FLGSWNPSAKAKAAGAPVKADIGKLEPGQMVVIEWRGKPVYVMHRTPAQLDALPELN-SV 91
Query: 115 LRDPQAD----------SDRVKDPSWLVIIGICTHLGCVP-------IANAG--DW-GGY 154
L+DP++ DR P LV++G+CTHLGC P A+ G +W GG+
Sbjct: 92 LKDPESKISDQPAYITGVDRAIRPELLVLVGLCTHLGCAPKFRPEVGAADLGGDEWLGGF 151
Query: 155 YCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
+CPCHGS +D SGR+ G PA N+EVPPY F + +L+
Sbjct: 152 FCPCHGSKFDLSGRVYSGVPASKNLEVPPYSFEGDNVLV 190
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F+ S + SA A A ++ D+ + GQ V +WRGKP+++ HR
Sbjct: 33 FLGSWNPSAKAKAAGAPVKADIGKLEPGQMVVIEWRGKPVYVMHR 77
>gi|120555381|ref|YP_959732.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Marinobacter
aquaeolei VT8]
gi|120325230|gb|ABM19545.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Marinobacter
aquaeolei VT8]
Length = 200
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 25/180 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G +SVVG V F++S + SA A A + V+++ I GQ +T +WRGKP+
Sbjct: 13 FLIGATSVVGGVGVVGAAVPFVASWNPSAKAEAAGAPVTVNVDKIEPGQQITVEWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADS-------------DRVKDPSWLVIIGICTHLG 141
+I RT ++ + N S+++DP+++ R P ++V++GICTHLG
Sbjct: 73 WIIRRTDAMLENIEKLN-SRVKDPESEEASQQPAYIAETGHQRSLKPEFIVLVGICTHLG 131
Query: 142 CVPI-------ANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CVP A+ GD W GG +CPCHGS +D SGR+ G PAP N+EVPPY+F D+ +
Sbjct: 132 CVPTYRPEVAPADLGDEWLGGLFCPCHGSKFDLSGRVFTGQPAPLNLEVPPYRFDDDATI 191
>gi|449328056|gb|AGE94357.1| hypothetical protein [Citrobacter amalonaticus Y19]
Length = 184
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPS 129
++V L + GQ+V W+GK + I HRT +EI + + S L DPQ+DS+RV P
Sbjct: 56 LDVSLAGVAAGQTVRRIWQGKLILIHHRTPQEIAAARTGDHSALIDPQSDSERVTPDHPQ 115
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+ G C H GCVP A G G+ CPCHGS +D SGR+ +GPA N+ VP Y F +G
Sbjct: 116 WLVVQGYCPHAGCVPNARPGG-QGWVCPCHGSEFDTSGRVTRGPATANLAVPDYVFHPDG 174
Query: 190 ILIRM 194
+ +R+
Sbjct: 175 LTVRI 179
>gi|227819061|ref|YP_002823032.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Sinorhizobium
fredii NGR234]
gi|227338060|gb|ACP22279.1| putative ubiquinol-cytochrome c reductase iron-sulfur subunit
[Sinorhizobium fredii NGR234]
Length = 149
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 70/103 (67%), Gaps = 15/103 (14%)
Query: 98 HRTQKEIDTEQNTNISQLRDPQADSDRVKD---------------PSWLVIIGICTHLGC 142
+RTQ+EI+T + T + L+DP A + + D +W+V+IG+CTHLGC
Sbjct: 38 NRTQQEIETARATALDDLKDPLARNANLADDQPATDLARSAGEGRENWIVMIGVCTHLGC 97
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+ AGD+GG++CPCHGSHYD +GR+RKGPAP N+ +P + F
Sbjct: 98 VPLGQAGDYGGWFCPCHGSHYDTAGRVRKGPAPENLAIPNFAF 140
>gi|345878139|ref|ZP_08829864.1| stringent starvation protein A [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344224820|gb|EGV51198.1| stringent starvation protein A [endosymbiont of Riftia pachyptila
(vent Ph05)]
Length = 198
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 99/167 (59%), Gaps = 23/167 (13%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
+S VG V A VV F+++ S S A A +E D+ + GQ + KWRGKP+++ +R
Sbjct: 18 TSAVGAVGAGFVVYPFLAAWSPSEKAKAAGAPVEADIGKLEPGQMMRVKWRGKPVWVVYR 77
Query: 100 TQKEIDTEQNTNISQLRDPQADS-----DRVKDPS------WLVIIGICTHLGCVP---- 144
T++ + + T + L DP +D D K+P+ +LV +GICTHLGC P
Sbjct: 78 TEQNL-KDLPTLDAALLDPASDDTGQQPDYCKNPARSIKEKYLVAVGICTHLGCSPTYRP 136
Query: 145 -IANA---GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
+A A +W GG++CPCHGS +D +GR+ G PAP N+E+PPYQ+
Sbjct: 137 DVAPADLGAEWKGGFFCPCHGSRFDLAGRVYAGVPAPKNLEIPPYQY 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+S VG V A VV F+++ S S A A +E D+ + GQ + KWRGKP+++ +R
Sbjct: 18 TSAVGAVGAGFVVYPFLAAWSPSEKAKAAGAPVEADIGKLEPGQMMRVKWRGKPVWVVYR 77
>gi|261855738|ref|YP_003263021.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Halothiobacillus neapolitanus c2]
gi|261836207|gb|ACX95974.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Halothiobacillus neapolitanus c2]
Length = 198
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 23/178 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G + VG V A F+SS SA A A ++V++ + EGQ VT WRG+P+
Sbjct: 13 FLTGSAIAVGAVGAGFATVPFLSSFEPSARAEAAGAPVDVNIGKLAEGQMVTVAWRGQPI 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDPSWLVIIGICTHLGCV 143
F+ HRT K ++ + + SQL DP + + R + + V+IG+CTHLGC
Sbjct: 73 FVVHRTDKMVEMLPSLD-SQLLDPNSAVASQQPKFADNFFRARKKNIFVVIGVCTHLGCA 131
Query: 144 PIAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
P DW GG++CPCHGS YD +GR+ K PAP N+ VP Y F + I+
Sbjct: 132 PTYRPEVAPKDLGPDWKGGFFCPCHGSKYDLAGRVYKSMPAPLNLLVPDYIFATDDIV 189
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ G + VG V A F+SS SA A A ++V++ + EGQ VT WRG+P+
Sbjct: 13 FLTGSAIAVGAVGAGFATVPFLSSFEPSARAEAAGAPVDVNIGKLAEGQMVTVAWRGQPI 72
Query: 288 FIRHR 292
F+ HR
Sbjct: 73 FVVHR 77
>gi|365884134|ref|ZP_09423206.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 375]
gi|365287336|emb|CCD95737.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske
iron-sulfur protein) (RISP) [Bradyrhizobium sp. ORS 375]
Length = 216
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 26/194 (13%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMA-TIEVDLNL 78
N D T+R F Y++ + +G A + + + M A LA +E D +
Sbjct: 8 NSDAAASPTRRD-FLYVVTAAFAGIG---ATASLVPMVGQMEPDARTLAAGGPVEFDASK 63
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN-ISQLRDPQADS----------DRVKD 127
+ GQ +WR +P+FI +R + T Q+ + +S+L DPQ+ S R D
Sbjct: 64 LQPGQQAVVRWRSRPVFIVNRPPAALKTLQDASFVSRLSDPQSTSVQQPPYATNWHRSID 123
Query: 128 PSWLVIIGICTHLGCVPI---------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTN 177
P++ V++GICTHLGC+P+ AG GGY+CPCHGS YD +GR+ G PAP N
Sbjct: 124 PAYGVLVGICTHLGCIPLFYPDPNAEMPAAGWRGGYFCPCHGSKYDLAGRVFAGVPAPYN 183
Query: 178 MEVPPYQFGDEGIL 191
+ VPPY+ ++ I+
Sbjct: 184 LPVPPYRLINDTIV 197
>gi|254282285|ref|ZP_04957253.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium NOR51-B]
gi|219678488|gb|EED34837.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium NOR51-B]
Length = 205
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 85/146 (58%), Gaps = 22/146 (15%)
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD---- 123
A A ++ D++ I GQ V +WRGKP+++ RT ++ID + L+DP +
Sbjct: 53 AGAPVKADISKIEPGQMVVVEWRGKPVYVVRRTPEQIDALSQLD-GNLKDPSSAISKQPG 111
Query: 124 ------RVKDPSWLVIIGICTHLGCVPI----ANAGD-----W-GGYYCPCHGSHYDASG 167
R P +LV++G+CTHLGC P A D W GG++CPCHGS +D +G
Sbjct: 112 YISGIGRAIKPEFLVVVGLCTHLGCAPAFRPEVGAADMGGDSWVGGFFCPCHGSKFDLAG 171
Query: 168 RIRKG-PAPTNMEVPPYQFGDEGILI 192
R+ G PAPTN+EVPPY F D+ +L+
Sbjct: 172 RVFSGVPAPTNLEVPPYSFEDDNVLV 197
>gi|254468791|ref|ZP_05082197.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [beta
proteobacterium KB13]
gi|207087601|gb|EDZ64884.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [beta
proteobacterium KB13]
Length = 200
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 110/192 (57%), Gaps = 26/192 (13%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
DKG ++ +RK +++ + G+ A + + F+SSM+ S A A++EVD + I
Sbjct: 5 DKGFDKDRRK---FLLTATALTGGLGVAAAGI-PFVSSMTPSEKAKAAGASVEVDTSKIK 60
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ-----------ADSDRVKDPS 129
+G+ +T +WRG+P+++ +RT + I + + L DP ++ R
Sbjct: 61 KGELITTEWRGQPVWVLNRTDEMIQSLPKLD-KNLADPNLKVTSQQPKYCQNATRSIKSD 119
Query: 130 WLVIIGICTHLGCVPIAN-------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEV 180
LV++GICTHLGC P A DW GG++CPCHGS +D +GR+ KG PAPTN+ V
Sbjct: 120 MLVVVGICTHLGCSPSAKIEPKGDMGDDWSGGFFCPCHGSKFDLAGRVYKGSPAPTNLVV 179
Query: 181 PPYQFGDEGILI 192
PP+++ DE ++
Sbjct: 180 PPHKYLDENTIL 191
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 273
DKG ++ +RK +++ + G+ A + + F+SSM+ S A A++EVD + I
Sbjct: 5 DKGFDKDRRK---FLLTATALTGGLGVAAAGI-PFVSSMTPSEKAKAAGASVEVDTSKIK 60
Query: 274 EGQSVTFKWRGKPLFIRHR 292
+G+ +T +WRG+P+++ +R
Sbjct: 61 KGELITTEWRGQPVWVLNR 79
>gi|359786642|ref|ZP_09289762.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Halomonas
sp. GFAJ-1]
gi|359296173|gb|EHK60427.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Halomonas
sp. GFAJ-1]
Length = 196
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 112/193 (58%), Gaps = 28/193 (14%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
D G + +R+ + G +SVVG V A V F++S SA LA A + + + +
Sbjct: 3 DNGVNKGRRR----FLVGATSVVGAVGAVGVAVPFVASWQPSARALAAGAPVRANFSKLE 58
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL--------- 131
GQ VT +WRG+P++I +RT + + ++ + +L DP DS + PS++
Sbjct: 59 PGQRVTIEWRGRPVWIINRTPEMNERTESLDPGRLADP--DSSEQQQPSYITGPLRSIRP 116
Query: 132 ---VIIGICTHLGCVPI-------ANAGDW-GGYYCPCHGSHYDASGRI-RKGPAPTNME 179
V++G+CTHLGC P+ A +W GG++CPCHGS++D +GR+ R PAPTN+E
Sbjct: 117 EVGVMVGVCTHLGCSPLYRPEPEAAVTDNWPGGFFCPCHGSYFDLAGRVFRNVPAPTNLE 176
Query: 180 VPPYQFGDEGILI 192
VPPY+F E I++
Sbjct: 177 VPPYRFEGEDIIV 189
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 273
D G + +R+ + G +SVVG V A V F++S SA LA A + + + +
Sbjct: 3 DNGVNKGRRR----FLVGATSVVGAVGAVGVAVPFVASWQPSARALAAGAPVRANFSKLE 58
Query: 274 EGQSVTFKWRGKPLFIRHR 292
GQ VT +WRG+P++I +R
Sbjct: 59 PGQRVTIEWRGRPVWIINR 77
>gi|90580209|ref|ZP_01236016.1| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit
[Photobacterium angustum S14]
gi|90438511|gb|EAS63695.1| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit
[Vibrio angustum S14]
Length = 196
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 100/172 (58%), Gaps = 21/172 (12%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
+SVVG + A +V FI S + SA A A +EVD++ + +GQ V +WRGKP+++ R
Sbjct: 18 TSVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRR 77
Query: 100 TQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP--IAN 147
+ K + E +T+ +LRDP ++ R P + +GICTHLGC P + N
Sbjct: 78 S-KAVLQELSTHDGELRDPSSEEPQQPSYAQNEFRSVKPEIFLALGICTHLGCSPTYLPN 136
Query: 148 A------GDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
+ G G++CPCHGS +D +GR+ G PAP N+ +PPYQF D+ +I
Sbjct: 137 SFNEQVNGVSSGFFCPCHGSTFDMAGRVFAGVPAPLNLVIPPYQFLDDNTII 188
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SVVG + A +V FI S + SA A A +EVD++ + +GQ V +WRGKP+++ R
Sbjct: 18 TSVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPVWVVRR 77
>gi|344343469|ref|ZP_08774337.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Marichromatium purpuratum 984]
gi|343804892|gb|EGV22790.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Marichromatium purpuratum 984]
Length = 197
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 22/178 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
++ +S VG V A + F++SM+ SA A A +E D++ I G + KWRGKP+
Sbjct: 13 LLVAATSAVGAVGAGFALVPFVASMNPSARARAAGAPVEADISKIEPGALLRVKWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQAD----------SDRVKDPSWLVIIGICTHLGCVP 144
++ HRT K ++ +N S L DP ++ R P +LV IGICTHLGC P
Sbjct: 73 WVVHRTPKMLEM-LASNDSNLVDPASEVPQQPEYCQNPTRSIKPEYLVAIGICTHLGCSP 131
Query: 145 IAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
DW GG++CPCHGS +D + R+ KG PAPTN+ +P + + ++ L+
Sbjct: 132 TYRPEFAPEDLGADWKGGFFCPCHGSRFDLAARVFKGVPAPTNLVIPKHTYLNDTTLL 189
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
++ +S VG V A + F++SM+ SA A A +E D++ I G + KWRGKP+
Sbjct: 13 LLVAATSAVGAVGAGFALVPFVASMNPSARARAAGAPVEADISKIEPGALLRVKWRGKPV 72
Query: 288 FIRHR 292
++ HR
Sbjct: 73 WVVHR 77
>gi|386815263|ref|ZP_10102481.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiothrix
nivea DSM 5205]
gi|386419839|gb|EIJ33674.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiothrix
nivea DSM 5205]
Length = 200
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 114/195 (58%), Gaps = 29/195 (14%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
+ G ++++R+ ++IA +SVVG A ++ F+SS S SA LA A +EV + +
Sbjct: 3 NSGVDKSRRR---FLIAA-TSVVGAAGAAAIATPFLSSWSPSARALAAGAPVEVSVTKVE 58
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS-------------DRVKD 127
GQ + WRGKP++I +RT++ +D + + QL+DP +D+ R
Sbjct: 59 PGQLLRVIWRGKPVWIVNRTKEMLDALPSLD-GQLKDPNSDNPKQQPEYAKNLARTREGK 117
Query: 128 PSWLVIIGICTHLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTN 177
+LV++GICTHLGC P A+ G +W GG+YCPCHGS +D +GR+ K PA N
Sbjct: 118 EQYLVLVGICTHLGCSPTYRPELAPADLGPEWKGGWYCPCHGSRFDLAGRVFKNVPAGAN 177
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY F D+ ++
Sbjct: 178 LEVPPYYFKDDNTVL 192
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 273
+ G ++++R+ ++IA +SVVG A ++ F+SS S SA LA A +EV + +
Sbjct: 3 NSGVDKSRRR---FLIAA-TSVVGAAGAAAIATPFLSSWSPSARALAAGAPVEVSVTKVE 58
Query: 274 EGQSVTFKWRGKPLFIRHR 292
GQ + WRGKP++I +R
Sbjct: 59 PGQLLRVIWRGKPVWIVNR 77
>gi|89074189|ref|ZP_01160688.1| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit
[Photobacterium sp. SKA34]
gi|89050125|gb|EAR55651.1| putative ubiquinol-cytochrome c reductase,iron-sulfur subunit
[Photobacterium sp. SKA34]
Length = 196
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 98/177 (55%), Gaps = 21/177 (11%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ +SVVG + A ++ FI S + SA A A +EVD++ + +GQ V +WRGKP+
Sbjct: 13 FLTATTSVVGGLGAAAIAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ R+ K + E +T+ +LRDP +D R P + +GICTHLGC P
Sbjct: 73 WVVRRS-KAVLQELSTHDGELRDPSSDEPQQPSYAQNEFRSVKPEIFLALGICTHLGCSP 131
Query: 145 I--------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
G G++CPCHGS +D +GR+ G PAP N+ +PPYQF D+ +I
Sbjct: 132 TYLPDSFNEQVNGVSSGFFCPCHGSTFDMAGRVFAGVPAPLNLVIPPYQFLDDNTII 188
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ +SVVG + A ++ FI S + SA A A +EVD++ + +GQ V +WRGKP+
Sbjct: 13 FLTATTSVVGGLGAAAIAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVRR 77
>gi|261365383|ref|ZP_05978266.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
mucosa ATCC 25996]
gi|288566179|gb|EFC87739.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Neisseria
mucosa ATCC 25996]
Length = 193
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 103/185 (55%), Gaps = 25/185 (13%)
Query: 29 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICT 138
W+GKP+++ +RT +++ + + + DP+++ D R P+ V IGICT
Sbjct: 67 WQGKPIWVVNRTDQQLKDLKALD-GAVSDPKSEVDHQPENCKNETRSIKPNIFVAIGICT 125
Query: 139 HLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GD 187
HLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPPY++ D
Sbjct: 126 HLGCSPTYRPDVAPADLGADWKGGFFCPCHGSKFDMAGRVYKGVPAPTNLVVPPYKYLSD 185
Query: 188 EGILI 192
+L+
Sbjct: 186 TTVLV 190
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 222 QRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
+R+ T G V + A V F S A A A A +E+D++ I GQ +T +
Sbjct: 10 RRRFLTLATCGAGGVAALGVATPFVASFFPSEKAKA---AGAPVEIDVSKIESGQMLTAE 66
Query: 282 WRGKPLFIRHR 292
W+GKP+++ +R
Sbjct: 67 WQGKPIWVVNR 77
>gi|187928876|ref|YP_001899363.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ralstonia
pickettii 12J]
gi|187725766|gb|ACD26931.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Ralstonia
pickettii 12J]
Length = 201
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 24/187 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 85
T R+ ++A G+ VG V F++SM+ S + A +EV+L+ + G V
Sbjct: 9 RTVRQRRLLLLATGT--VGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSVEPGALV 66
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIG 135
T WRGKP++I HRT+ +D T+ + L DP++ D R P + V +G
Sbjct: 67 TVAWRGKPVWILHRTRDMLD-RLGTHDNLLGDPRSKEDQQPAYARNATRSLRPDYFVAVG 125
Query: 136 ICTHLGCVP-------IANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
ICTHLGC+P + GD W GG++CPCHGS +D +GR+ PAP N+E+PPYQ+
Sbjct: 126 ICTHLGCIPNYRPEVGAPDLGDHWPGGFFCPCHGSKFDLAGRVFLNVPAPLNLEIPPYQY 185
Query: 186 GDEGILI 192
D LI
Sbjct: 186 LDNTRLI 192
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 278
T R+ ++A G+ VG V F++SM+ S + A +EV+L+ + G V
Sbjct: 9 RTVRQRRLLLLATGT--VGGVGLAGATLPFVASMAPSRAARSKGAPVEVNLDSVEPGALV 66
Query: 279 TFKWRGKPLFIRHR 292
T WRGKP++I HR
Sbjct: 67 TVAWRGKPVWILHR 80
>gi|294139260|ref|YP_003555238.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Shewanella
violacea DSS12]
gi|293325729|dbj|BAJ00460.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Shewanella
violacea DSS12]
Length = 196
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 91/157 (57%), Gaps = 21/157 (13%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FI S + SA A A +EV+++ I GQ + WRGKP+++ RT KEI T T SQ
Sbjct: 33 FIKSWNPSAKAKAAGAPVEVNISKIEPGQLIRVAWRGKPVWVVRRT-KEILTNLATLDSQ 91
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI--------ANAGDWGGYYC 156
LRDP + + R +P + + +G+CTHLGC P G G+YC
Sbjct: 92 LRDPASAEEQQPSYAQNAVRSINPEYFIAVGLCTHLGCSPTYLPDTFSEQVEGVPSGFYC 151
Query: 157 PCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
PCHGS +D +GR+ +G PAP N+ VPP+Q+ DEG++I
Sbjct: 152 PCHGSKFDLAGRVFQGVPAPLNLVVPPHQYIDEGLVI 188
>gi|238021568|ref|ZP_04601994.1| hypothetical protein GCWU000324_01468 [Kingella oralis ATCC 51147]
gi|237866182|gb|EEP67224.1| hypothetical protein GCWU000324_01468 [Kingella oralis ATCC 51147]
Length = 194
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 96/162 (59%), Gaps = 25/162 (15%)
Query: 52 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTN 111
+V + S A A A A +EVD++ I GQ +T +WRGKP+F+ +RT++++ + +
Sbjct: 33 LVASWFPSEKAKA---AGAAVEVDISKIESGQMITAEWRGKPIFVLNRTEQQVKDLPSLD 89
Query: 112 ISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI---------ANAGDW- 151
QL DP++++D R P+ V +GICTHLGC P G W
Sbjct: 90 -GQLADPKSNADQQPENCKNPTRSLKPNLWVAVGICTHLGCSPTFRPDVGAADLGGGSWK 148
Query: 152 GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
GG++CPCHGS +D +GR+ G PAPTN+ +PPY++ ++ +++
Sbjct: 149 GGFFCPCHGSKFDLAGRVYAGVPAPTNLVIPPYKYINDNVVL 190
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 245 VVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+V + S A A A A +EVD++ I GQ +T +WRGKP+F+ +R
Sbjct: 33 LVASWFPSEKAKA---AGAAVEVDISKIESGQMITAEWRGKPIFVLNR 77
>gi|254447096|ref|ZP_05060563.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium HTCC5015]
gi|198263235|gb|EDY87513.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium HTCC5015]
Length = 196
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 95/159 (59%), Gaps = 24/159 (15%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++SMS SA A A +E D++ + G+ VTFKWRGKP++I +RT K + + T
Sbjct: 32 FVASMSPSARARAAGAPVEADISKLEAGRRVTFKWRGKPVWIVNRTDKML-ADMKTLEGT 90
Query: 115 LRDPQADSDR-----------VKDPSWLVIIGICTHLGCVPIAN--------AGDW-GGY 154
L DP +++ + +KD +LV++G+CTHLGC P DW GG+
Sbjct: 91 LADPNSEAPQQPEYTQNGTRSIKD-KYLVLVGLCTHLGCSPQFRPEVAAEDLGADWKGGF 149
Query: 155 YCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
+CPCHGS +D +GR+ G PAPTNM +PP+ + D+ ++
Sbjct: 150 FCPCHGSKFDLAGRVYAGVPAPTNMVIPPHYYIDDNTIL 188
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F++SMS SA A A +E D++ + G+ VTFKWRGKP++I +R
Sbjct: 32 FVASMSPSARARAAGAPVEADISKLEAGRRVTFKWRGKPVWIVNR 76
>gi|119604297|gb|EAW83891.1| hCG1641727 [Homo sapiens]
Length = 180
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 100/194 (51%), Gaps = 39/194 (20%)
Query: 3 AHSDIRTPDFSKY----RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI PDF Y D ++ RK F+Y++ ++V AK+V++QF+S
Sbjct: 20 SHTDINVPDFPDYCCIEIFDGTKSSKEDGEARKGFSYLVTATTAVGVTYAAKNVISQFVS 79
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
S+SASAD A++ I + L IPEG+++ FKWRGK LF+ HRT+KEID E
Sbjct: 80 SISASADESAVSKIAIKLFDIPEGKNMAFKWRGKSLFVCHRTKKEIDQE----------- 128
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
A +R+ C PIAN D+G DASGRI KGPAP +
Sbjct: 129 PAVEERLHSSC------------CTPIANE-DFG-----------DASGRIWKGPAPLEL 164
Query: 179 EVPPYQFGDEGILI 192
P Y F E +I
Sbjct: 165 GAPSYGFTSEDTVI 178
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKY----RRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI PDF Y D ++ RK F+Y++ ++V AK+V++QF+S
Sbjct: 20 SHTDINVPDFPDYCCIEIFDGTKSSKEDGEARKGFSYLVTATTAVGVTYAAKNVISQFVS 79
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
S+SASAD A++ I + L IPEG+++ FKWRGK LF+ HR
Sbjct: 80 SISASADESAVSKIAIKLFDIPEGKNMAFKWRGKSLFVCHR 120
>gi|58039035|ref|YP_190999.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Gluconobacter
oxydans 621H]
gi|58001449|gb|AAW60343.1| Ubiquinol-cytochrome C reductase iron-sulfur subunit [Gluconobacter
oxydans 621H]
Length = 210
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 99/170 (58%), Gaps = 22/170 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSM-SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPL 94
++A G+ V+G A ++ F+ S+ + +A L+ ++VDL+ + GQ +T +WR P+
Sbjct: 18 LLATGTVVLGCAGACALAVPFVESLKNPAATSLSDRLLDVDLSSLAPGQDITVRWRDWPV 77
Query: 95 FIRHRTQKEIDTEQNTN-ISQLRDPQADSD------------RVKDPSWLVIIGICTHLG 141
FI+ RT + + Q + ++ LRD ADS R P + V+IG+CTHLG
Sbjct: 78 FIQRRTPQMLAALQAPDHLATLRD--ADSKILQQPKDATNWHRSVRPEYGVLIGVCTHLG 135
Query: 142 CVPI-----ANAGDWGGYYCPCHGSHYDASGRI-RKGPAPTNMEVPPYQF 185
CVP + GGY+CPCHGSH+DA+GR+ R+ PAP N+ VPP F
Sbjct: 136 CVPSFEKPGSTPEAKGGYFCPCHGSHFDAAGRVARRAPAPCNLPVPPVTF 185
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSM-SASADVLAMATIEVDLNLIPEGQSVTFKWRGKPL 287
++A G+ V+G A ++ F+ S+ + +A L+ ++VDL+ + GQ +T +WR P+
Sbjct: 18 LLATGTVVLGCAGACALAVPFVESLKNPAATSLSDRLLDVDLSSLAPGQDITVRWRDWPV 77
Query: 288 FIRHR 292
FI+ R
Sbjct: 78 FIQRR 82
>gi|374620474|ref|ZP_09693008.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium HIMB55]
gi|374303701|gb|EHQ57885.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium HIMB55]
Length = 208
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 109/204 (53%), Gaps = 27/204 (13%)
Query: 12 FSKYRRDRNPDKGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM- 69
S+ + D G Q R+ F M G S G+V V F++S + S A
Sbjct: 1 MSEVEAGQAADAGSASDQTRRRFLTMATTGVSAAGVV---GVAVPFMASWNPSEKAKAAG 57
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD------ 123
A ++ D++ I GQ V +WRGKP+++ RT +++ + + + L+DP +D+
Sbjct: 58 APVKADISKIEPGQMVVVEWRGKPVYVLRRTPEQVAGLPSLD-NNLKDPNSDTSDQPDYI 116
Query: 124 ----RVKDPSWLVIIGICTHLGCVP-------IANAG--DW-GGYYCPCHGSHYDASGRI 169
R + +LV++G+CTHLGC P A+ G W GG++CPCHGS +D +GR+
Sbjct: 117 SGAPRSLNEEYLVVVGLCTHLGCAPKFRPEVGAADLGGDSWLGGFFCPCHGSKFDLAGRV 176
Query: 170 RKG-PAPTNMEVPPYQFGDEGILI 192
KG PA N+ +PPY F +G+L+
Sbjct: 177 YKGVPAADNLMIPPYSFEGDGVLV 200
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 205 FSKYRRDRNPDKGQEETQ-RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM- 262
S+ + D G Q R+ F M G S G+V V F++S + S A
Sbjct: 1 MSEVEAGQAADAGSASDQTRRRFLTMATTGVSAAGVV---GVAVPFMASWNPSEKAKAAG 57
Query: 263 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A ++ D++ I GQ V +WRGKP+++ R
Sbjct: 58 APVKADISKIEPGQMVVVEWRGKPVYVLRR 87
>gi|74317851|ref|YP_315591.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiobacillus
denitrificans ATCC 25259]
gi|74057346|gb|AAZ97786.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Thiobacillus
denitrificans ATCC 25259]
Length = 201
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 111/190 (58%), Gaps = 23/190 (12%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
GQ+ RK ++IA S+V G+ A V +S M ++ A A +EVD++ I G
Sbjct: 7 GQKVDTRKR-KFLIAATSAVGGVAVAGVAVPLVMSMMPSARAKAAGAPVEVDVSKIEPGM 65
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVI 133
+T +WRGKP++I RT++ +D + +T QL DP+++ R P LV
Sbjct: 66 LLTVEWRGKPVWIVSRTKEMLD-KLSTLDGQLADPKSEMPQQPEYCTNPVRSIKPELLVA 124
Query: 134 IGICTHLGCVPI-------ANAG-DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
+GICTHLGC P A+ G DW GG++CPCHGS +D +GR+ KG PAPTN+ VPP+
Sbjct: 125 VGICTHLGCSPTYRKDVGAADLGADWPGGFFCPCHGSRFDLAGRVYKGVPAPTNLVVPPH 184
Query: 184 QF-GDEGILI 192
Q+ D +LI
Sbjct: 185 QYLSDAKLLI 194
Score = 37.0 bits (84), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
GQ+ RK ++IA S+V G+ A V +S M ++ A A +EVD++ I G
Sbjct: 7 GQKVDTRKR-KFLIAATSAVGGVAVAGVAVPLVMSMMPSARAKAAGAPVEVDVSKIEPGM 65
Query: 277 SVTFKWRGKPLFIRHR 292
+T +WRGKP++I R
Sbjct: 66 LLTVEWRGKPVWIVSR 81
>gi|410622956|ref|ZP_11333776.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Glaciecola
pallidula DSM 14239 = ACAM 615]
gi|410157418|dbj|GAC29150.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Glaciecola
pallidula DSM 14239 = ACAM 615]
Length = 210
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 26/194 (13%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNL 78
N ++ + +RK T G+ VVG + A F++S SA A A ++VD++
Sbjct: 14 NNEQPKSSDRRKFLTV----GTCVVGAIGAVGAAVPFVASWQPSAKAKAAGADVQVDISA 69
Query: 79 IPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDP 128
I GQ + KWRGKP++I RT + +++ + + +LRDP ++++ R
Sbjct: 70 IQLGQMIRVKWRGKPVWIVRRTPELLES-LSVHEGELRDPNSETEQQPAFAQNEYRSLKS 128
Query: 129 SWLVIIGICTHLGCVP---------IANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNM 178
+L+++GICTHLGC P G G++CPCHGS +D +GR+ +G PAP N+
Sbjct: 129 EYLILVGICTHLGCSPQHLVDGSFEQYAEGVAEGFFCPCHGSKFDMAGRVFQGVPAPLNL 188
Query: 179 EVPPYQFGDEGILI 192
VPPYQ+ D+ +I
Sbjct: 189 VVPPYQYVDDNTVI 202
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNL 271
N ++ + +RK T G+ VVG + A F++S SA A A ++VD++
Sbjct: 14 NNEQPKSSDRRKFLTV----GTCVVGAIGAVGAAVPFVASWQPSAKAKAAGADVQVDISA 69
Query: 272 IPEGQSVTFKWRGKPLFIRHR 292
I GQ + KWRGKP++I R
Sbjct: 70 IQLGQMIRVKWRGKPVWIVRR 90
>gi|237730930|ref|ZP_04561411.1| ubiquinol-cytochrome c reductase [Citrobacter sp. 30_2]
gi|226906469|gb|EEH92387.1| ubiquinol-cytochrome c reductase [Citrobacter sp. 30_2]
Length = 183
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPS 129
I+V L + GQ+V W+GK + I HRT EI T ++ ++ L DPQ DS RV P
Sbjct: 55 IDVSLAGVAAGQTVRRVWQGKLILIHHRTTDEIITARSADLDTLIDPQPDSARVSAAHPQ 114
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+ G C H GCVP A G G+ CPCHGS +D SGR+ +GPA N+ +P Y +G
Sbjct: 115 WLVVQGYCPHAGCVPNARPGG-EGWICPCHGSEFDTSGRVTRGPATANLAIPDYVIHSDG 173
Query: 190 ILIRM 194
++R+
Sbjct: 174 QVVRI 178
>gi|83648540|ref|YP_436975.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Hahella
chejuensis KCTC 2396]
gi|83636583|gb|ABC32550.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Hahella
chejuensis KCTC 2396]
Length = 193
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 103/175 (58%), Gaps = 20/175 (11%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G +SVVG + A F++S + SA A A ++V+++ I GQ +T +WRGKP+
Sbjct: 13 FLVGATSVVGGIGAIGAAVPFVASWNPSAKAKAAGAPVKVNISKIEPGQQMTVEWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSDR-----------VKDPSWLVIIGICTHLGCV 143
++ RT E+ ++ QL+DPQ++ + +KD +++++GICTHLGC
Sbjct: 73 WVVRRT-PEMLKGLDSIAEQLQDPQSEKPQQPAYAQNPHRSIKD-EYVILVGICTHLGCS 130
Query: 144 P-----IANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
P + GG+YCPCHGS +D +GR+ K PAP N+EVPP+ + D+ LI
Sbjct: 131 PKFLPEVIPDETVGGFYCPCHGSKFDLAGRVFKDVPAPKNLEVPPHMYVDDVNLI 185
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ G +SVVG + A F++S + SA A A ++V+++ I GQ +T +WRGKP+
Sbjct: 13 FLVGATSVVGGIGAIGAAVPFVASWNPSAKAKAAGAPVKVNISKIEPGQQMTVEWRGKPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVRR 77
>gi|399543796|ref|YP_006557104.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Marinobacter
sp. BSs20148]
gi|399159128|gb|AFP29691.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Marinobacter
sp. BSs20148]
Length = 197
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 101/177 (57%), Gaps = 22/177 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G ++ VG V F++S + SA A A + V++ I GQ +T +WRG P+
Sbjct: 13 FLVGATAAVGGVGIVGAAVPFVASWNPSAKAEAAGAPVTVNIEKIEPGQQITVEWRGTPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
+I RT + +D + + Q++DPQ+++D R +P + V++G+CTHLGCVP
Sbjct: 73 WIIRRTTEMLDNIEKLS-DQMKDPQSEADQQPTYANDVFRSINPEYAVLVGLCTHLGCVP 131
Query: 145 -----IANAG---DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
+A + DW GG +CPCHGS YD +GR+ PAP N+ VPP+++ D+ L
Sbjct: 132 SYRPEVAPSDLGEDWLGGLFCPCHGSRYDMAGRVYDAQPAPLNLVVPPHRYDDDMTL 188
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ G ++ VG V F++S + SA A A + V++ I GQ +T +WRG P+
Sbjct: 13 FLVGATAAVGGVGIVGAAVPFVASWNPSAKAEAAGAPVTVNIEKIEPGQQITVEWRGTPV 72
Query: 288 FIRHR 292
+I R
Sbjct: 73 WIIRR 77
>gi|110833439|ref|YP_692298.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Alcanivorax
borkumensis SK2]
gi|110646550|emb|CAL16026.1| ubiquinol--cytochrome c reductase, iron-sulfur subunit [Alcanivorax
borkumensis SK2]
Length = 195
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 102/176 (57%), Gaps = 19/176 (10%)
Query: 34 TYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL-AMATIEVDLNLIPEGQSVTFKWRGK 92
T++I G +S +G A V F+ S SA A A ++VD+ + GQ V +WRG+
Sbjct: 12 TFLI-GLTSAIGAAGAVGVAVPFVKSWQPSAKAKNAGAPVKVDIGRLEAGQRVVEEWRGQ 70
Query: 93 PLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD----------PSWLVIIGICTHLGC 142
P+++ RT+ +DT + +LRDP ++ D+ D +LV++G CTHLGC
Sbjct: 71 PIWVVRRTENMLDTLPQLD-EKLRDPASEVDQQPDYARNEWRSIKKEYLVLVGTCTHLGC 129
Query: 143 VPIANAG-----DWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
P+ ++GG++CPCHGS +D +GR+ KG PAPTN+ VPP+ + E ++I
Sbjct: 130 SPLFEEQPTVELEFGGFFCPCHGSKFDFAGRVYKGVPAPTNLVVPPHSYLSEAVVI 185
>gi|254515259|ref|ZP_05127320.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium NOR5-3]
gi|219677502|gb|EED33867.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [gamma
proteobacterium NOR5-3]
Length = 208
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 24/175 (13%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
+S VG A + F+ S + SA A A ++ D+ I GQ V +WRGKP+++ HR
Sbjct: 27 TSAVGAAGAVGIAVPFLGSWNPSAKAKAAGAPVKADIGKIEPGQMVVVEWRGKPVYVVHR 86
Query: 100 TQKEIDTEQNTNISQLRDPQA-----------DSDRVKDPSWLVIIGICTHLGCVP---- 144
T E+ + + L+DP + DR LV++G+CTHLGC P
Sbjct: 87 T-PEMVADLDKVDGDLKDPDSAIASQQPAYITSKDRSIRSELLVVVGLCTHLGCAPKYRP 145
Query: 145 ---IANAG--DW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
A+ G DW GG++CPCHGS +D +GR+ G PA +N+EVPPY F + +L+
Sbjct: 146 EVGAADLGGDDWVGGFFCPCHGSKFDLAGRVYSGVPASSNLEVPPYSFESQNVLV 200
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+S VG A + F+ S + SA A A ++ D+ I GQ V +WRGKP+++ HR
Sbjct: 27 TSAVGAAGAVGIAVPFLGSWNPSAKAKAAGAPVKADIGKIEPGQMVVVEWRGKPVYVVHR 86
>gi|336123353|ref|YP_004565401.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Vibrio
anguillarum 775]
gi|365538556|ref|ZP_09363731.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Vibrio
ordalii ATCC 33509]
gi|335341076|gb|AEH32359.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Vibrio
anguillarum 775]
Length = 198
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 21/170 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ ++VVG + A +V FI S + SA A A +EV++ + EGQ V +WRGKP+
Sbjct: 13 FLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVEIGKLEEGQMVRVEWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ R+Q +D ++ +QLRDPQ+D R P + V +GICTHLGC P
Sbjct: 73 WVVRRSQSVVDGLKDIE-NQLRDPQSDEQQQPNYAQNAYRSIKPEYFVAVGICTHLGCSP 131
Query: 145 I--------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
G G++CPCHGS +D +GR+ +G PAP N+ +P Y +
Sbjct: 132 TYLPDSFSEQVQGVKSGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPQYMY 181
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ ++VVG + A +V FI S + SA A A +EV++ + EGQ V +WRGKP+
Sbjct: 13 FLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVEIGKLEEGQMVRVEWRGKPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVRR 77
>gi|386826241|ref|ZP_10113348.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Beggiatoa
alba B18LD]
gi|386427125|gb|EIJ40953.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Beggiatoa
alba B18LD]
Length = 199
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 24/160 (15%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++ SA A A +EVD++ + GQ +T +WRGKP++I RT KEI T +Q
Sbjct: 33 FVAYWQPSAKAQAAGAPVEVDISKLEPGQRLTVEWRGKPVWIVRRT-KEILEALPTLDAQ 91
Query: 115 LRDPQAD----------SDRVKDPSWLVIIGICTHLGCVP---------IANAGDW-GGY 154
LRDP +D ++R +LV++GICTHLGC P A DW GG+
Sbjct: 92 LRDPVSDNSIQPDYAKNANRAIKDEYLVVVGICTHLGCSPNYVPLGEGASALGSDWKGGF 151
Query: 155 YCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDEGILI 192
+CPCHGS +D +GR+ + PAPTN+ +PPY + D IL+
Sbjct: 152 FCPCHGSRFDLAGRVFQNVPAPTNLTIPPYSYLSDTRILV 191
Score = 37.0 bits (84), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
F++ SA A A +EVD++ + GQ +T +WRGKP++I R
Sbjct: 33 FVAYWQPSAKAQAAGAPVEVDISKLEPGQRLTVEWRGKPVWIVRR 77
>gi|426233959|ref|XP_004010973.1| PREDICTED: cytochrome b-c1 complex subunit Rieske,
mitochondrial-like [Ovis aries]
Length = 195
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 6/123 (4%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YR D + RK F+Y+I ++V AK+V++QF+S
Sbjct: 73 SHTDIKVPDFSDYRHPEVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVISQFVS 132
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRG + + + +EID E +SQLRDP
Sbjct: 133 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRG--IIVHALSNQEIDQEAAVEVSQLRDP 190
Query: 119 QAD 121
Q D
Sbjct: 191 QHD 193
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 4/93 (4%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YR D + RK F+Y+I ++V AK+V++QF+S
Sbjct: 73 SHTDIKVPDFSDYRHPEVLDSTKSSKESSEARKGFSYLITATTTVGVAYAAKNVISQFVS 132
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRG 284
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRG
Sbjct: 133 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRG 165
>gi|330446824|ref|ZP_08310475.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491015|dbj|GAA04972.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 196
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 21/177 (11%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ +SVVG + A +V FI S + SA A A +EVD++ + +GQ V +WRGKP+
Sbjct: 13 FLTATTSVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ R+ + E ++ QLRDP ++ R P + +GICTHLGC P
Sbjct: 73 WVVRRSDAVLK-ELESHDGQLRDPSSEEPQQPSYAQNNFRSVKPEIFLAVGICTHLGCSP 131
Query: 145 I--------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
+G G++CPCHGS +D +GR+ G PAP N+ +PPYQF D+ ++
Sbjct: 132 TYLPDSFSEQVSGVSSGFFCPCHGSKFDMAGRVFAGVPAPLNLVIPPYQFLDDNTIL 188
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ +SVVG + A +V FI S + SA A A +EVD++ + +GQ V +WRGKP+
Sbjct: 13 FLTATTSVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKLEDGQMVRVEWRGKPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVRR 77
>gi|399911535|ref|ZP_10779849.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit [Halomonas
sp. KM-1]
Length = 197
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 95/159 (59%), Gaps = 24/159 (15%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F++S SA A A ++ D++ + GQ +T +WRG+P++I RT I+ +N + ++
Sbjct: 33 FVASWQPSARARAAGAPVQADISKLEPGQRMTVEWRGRPVWIVMRTPDMIERTENFDPAR 92
Query: 115 LRDPQADSDRVKDPSWL------------VIIGICTHLGCVPI-------ANAGDW-GGY 154
L DP DS + P+++ V+IGICTHLGC P+ + W GGY
Sbjct: 93 LADP--DSQVQQQPAYVSGPLRSIRPEISVLIGICTHLGCSPLFRPSPDDVDMTAWPGGY 150
Query: 155 YCPCHGSHYDASGRI-RKGPAPTNMEVPPYQFGDEGILI 192
+CPCHGS++D +GR+ R PAP N+EVPPY+F + I+I
Sbjct: 151 FCPCHGSYFDLAGRVFRNVPAPANLEVPPYRFETDDIII 189
>gi|352104434|ref|ZP_08960400.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Halomonas
sp. HAL1]
gi|350598900|gb|EHA15002.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Halomonas
sp. HAL1]
Length = 199
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 112/195 (57%), Gaps = 30/195 (15%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIP 80
D G + +R+ + G +SVVG V A V F++S SA A A ++ D++ +
Sbjct: 3 DNGVNKGRRR----FLVGATSVVGAVGAVGVAVPFVASWQPSARARAAGAPVQADISRLE 58
Query: 81 EGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL--------- 131
GQ +T +WRG+P++I +RT + I+ ++ QL DP DS+ + P+++
Sbjct: 59 PGQRMTVEWRGRPIWIINRTPEMIERTESLGSDQLADP--DSEVPQQPAYIDGGLRSIRP 116
Query: 132 ---VIIGICTHLGCVPI---------ANAGDW-GGYYCPCHGSHYDASGRIRKG-PAPTN 177
V+IGICTHLGC P+ +W GG++CPCHGS +D +GR+ PAPTN
Sbjct: 117 EIGVLIGICTHLGCSPLFRPEPDAEGVGVDNWPGGFFCPCHGSRFDLAGRVFSNVPAPTN 176
Query: 178 MEVPPYQFGDEGILI 192
+EVPPY+F ++ I++
Sbjct: 177 LEVPPYRFENDDIIV 191
>gi|389810904|ref|ZP_10206075.1| ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit
[Rhodanobacter thiooxydans LCS2]
gi|388440499|gb|EIL96872.1| ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit
[Rhodanobacter thiooxydans LCS2]
Length = 201
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 92/180 (51%), Gaps = 25/180 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ +SVVG + + FI S SA A A + L I GQ +T WR P+
Sbjct: 13 FLTATTSVVGGIGIVAAAVPFIKSWEPSARAKAAGAPVTQSLAKIEAGQMLTVSWRSLPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD-------------RVKDPSWLVIIGICTHLG 141
F+ +RT+ ++ T + S+L DP++D R P WLV+IGICTHLG
Sbjct: 73 FVLNRTKAQLATLPMVD-SRLVDPKSDGGSADQQPKYAQNEARSIKPEWLVVIGICTHLG 131
Query: 142 CV--------PIANAGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CV P DW GG+YCPCH S YD +GR+ G PAP N+ VPPY F D+ +
Sbjct: 132 CVPDFVPEIKPEPFDPDWKGGFYCPCHKSRYDLAGRVYAGVPAPKNLPVPPYHFIDDSTI 191
>gi|380511523|ref|ZP_09854930.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Xanthomonas
sacchari NCPPB 4393]
Length = 209
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 102/181 (56%), Gaps = 25/181 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADV-LAMATIEVDLNLIPEGQSVTFKWRGKPL 94
+ +SVVG V A V FI S + SA LA A + D++ + EGQ + +WRG+P+
Sbjct: 17 FLTATTSVVGAVGAGFVAVPFIKSWNPSAKAKLAGAPVTADISALQEGQRLILEWRGQPI 76
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQA-DSDRVKD------------PSWLVIIGICTHLG 141
+I R++ +D + + S+L+DP++ + D+ D P V++G+CTHLG
Sbjct: 77 WIVKRSKAMLDALPSLD-SRLKDPESTNKDQQPDYVLKNPEYRSIKPDVSVLVGLCTHLG 135
Query: 142 CVPIANA--------GDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
C P A DW GGY+CPCH S +D SGR+ +G PAP N+ VPP+ + D+ L
Sbjct: 136 CSPEMVAEIRPEPYDPDWKGGYFCPCHKSRFDMSGRVFQGVPAPINLLVPPHHYQDDNTL 195
Query: 192 I 192
+
Sbjct: 196 V 196
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADV-LAMATIEVDLNLIPEGQSVTFKWRGKPL 287
+ +SVVG V A V FI S + SA LA A + D++ + EGQ + +WRG+P+
Sbjct: 17 FLTATTSVVGAVGAGFVAVPFIKSWNPSAKAKLAGAPVTADISALQEGQRLILEWRGQPI 76
Query: 288 FIRHR 292
+I R
Sbjct: 77 WIVKR 81
>gi|386288580|ref|ZP_10065720.1| glutamyl-tRNA(Gln) amidotransferase B subunit [gamma
proteobacterium BDW918]
gi|385278135|gb|EIF42107.1| glutamyl-tRNA(Gln) amidotransferase B subunit [gamma
proteobacterium BDW918]
Length = 198
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 101/187 (54%), Gaps = 26/187 (13%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVT 86
T R+ F + +SVVG A + F+ S + SA A A ++ D++ + GQ V
Sbjct: 8 TGRRRF---LTAATSVVGAAGAVGIATPFVGSWNPSAKAKAAGAPVKADISKLEPGQMVV 64
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQAD----------SDRVKDPSWLVIIGI 136
+WRGKP+++ RTQ+++ + L+DP++ + R P ++V++G+
Sbjct: 65 VEWRGKPVYVVRRTQEQVAGLKELG-QYLKDPESSGSDQPEYVEVATRSIRPEYMVLVGL 123
Query: 137 CTHLGC---------VPIANAGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
CTHLGC VP W GG++CPCHGS +D +GR+ +G PA N+ VPPY F
Sbjct: 124 CTHLGCAPKHHPEVGVPDLGGKSWLGGFFCPCHGSRFDLAGRVYQGSPASQNLIVPPYSF 183
Query: 186 GDEGILI 192
+ +L+
Sbjct: 184 EGDNVLV 190
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVT 279
T R+ F + +SVVG A + F+ S + SA A A ++ D++ + GQ V
Sbjct: 8 TGRRRF---LTAATSVVGAAGAVGIATPFVGSWNPSAKAKAAGAPVKADISKLEPGQMVV 64
Query: 280 FKWRGKPLFIRHR 292
+WRGKP+++ R
Sbjct: 65 VEWRGKPVYVVRR 77
>gi|350530197|ref|ZP_08909138.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Vibrio
rotiferianus DAT722]
Length = 196
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 98/177 (55%), Gaps = 21/177 (11%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ ++VVG + A +V FI S + SA A A +EVD++ I GQ V +W+GKP+
Sbjct: 13 FLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKIEAGQMVRVEWQGKPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSD----------RVKDPSWLVIIGICTHLGCVP 144
++ RTQ+ +D +N + QLRDPQ++ + R P + V +G CTHLGC P
Sbjct: 73 WVVRRTQEVVDNLKNID-GQLRDPQSEMEQQPVYAQNAHRSIKPEYFVAVGFCTHLGCSP 131
Query: 145 I--------ANAGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
G G++CPCHGS +D +GR+ +G PAP N+ VP + + + LI
Sbjct: 132 TYLPDTFAEQVQGVKSGFFCPCHGSKFDMAGRVFQGVPAPLNLVVPKHMYLSDTKLI 188
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
+ ++VVG + A +V FI S + SA A A +EVD++ I GQ V +W+GKP+
Sbjct: 13 FLTATTAVVGGLGAAAVAVPFIKSWNPSAKAKAAGAPVEVDISKIEAGQMVRVEWQGKPV 72
Query: 288 FIRHR 292
++ R
Sbjct: 73 WVVRR 77
>gi|121592580|ref|YP_984476.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Acidovorax
sp. JS42]
gi|120604660|gb|ABM40400.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Acidovorax
sp. JS42]
Length = 204
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 23/152 (15%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
+SS++ S ++ A +EVD+ +P G +T +WRGKP++I RT + + + Q +Q
Sbjct: 39 LVSSLAPSERARSLGAAVEVDIAGLPPGGMLTVEWRGKPVWIVRRTPEMLQSLQGLE-AQ 97
Query: 115 LRDPQADSDRVKD----------PSWLVIIGICTHLGCVPIA----------NAGDWGGY 154
L DP + D+ D P V IGICTHLGC P A AG GG+
Sbjct: 98 LADPASAKDQQPDYARNTHRSIQPEVFVAIGICTHLGCSPTAVAPGAPQSGLGAGWPGGF 157
Query: 155 YCPCHGSHYDASGRI-RKGPAPTNMEVPPYQF 185
+CPCHGS +D +GR+ R PAPTN+EVPP++F
Sbjct: 158 FCPCHGSTFDNAGRVYRNKPAPTNLEVPPHRF 189
Score = 37.4 bits (85), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SS++ S ++ A +EVD+ +P G +T +WRGKP++I R
Sbjct: 39 LVSSLAPSERARSLGAAVEVDIAGLPPGGMLTVEWRGKPVWIVRR 83
>gi|311103392|ref|YP_003976245.1| ubiquinol-cytochrome C reductase, iron-sulfur subunit
[Achromobacter xylosoxidans A8]
gi|310758081|gb|ADP13530.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Achromobacter xylosoxidans A8]
Length = 213
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 27/188 (14%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAVPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDP 128
P G T +WRGKP++I HR+ +++ T + L DP + + R + P
Sbjct: 71 PVGTMKTVEWRGKPVWIIHRSPEQL-AGLKTQDALLADPDSKRPGFTPKYAENEGRSRKP 129
Query: 129 SWLVIIGICTHLGCVPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTN 177
V +GICTHLGC P ++ DW GG+ CPCHGS +D +GR+ K PAP N
Sbjct: 130 ELFVCVGICTHLGCSPTSHFETGGGGGLGADWQGGFLCPCHGSTFDLAGRVYKNKPAPDN 189
Query: 178 MEVPPYQF 185
+EVPPYQ+
Sbjct: 190 LEVPPYQY 197
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAVPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
P G T +WRGKP++I HR
Sbjct: 71 PVGTMKTVEWRGKPVWIIHR 90
>gi|329114506|ref|ZP_08243265.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pomorum DM001]
gi|326695986|gb|EGE47668.1| Ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pomorum DM001]
Length = 212
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 23/173 (13%)
Query: 30 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQ-LRDPQADSD----------RVKDPSWLVIIGIC 137
W+GKP+FI RT +EI Q+ +++ LRD ++ ++ R P + V +GIC
Sbjct: 73 WQGKPVFIMRRTPEEIAALQDHALAEKLRDAESAANQQPAYARNWHRSLVPEYGVYVGIC 132
Query: 138 THLGCVPIAN------AGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
THLGCVP N A GGY CPCHGS +D +GR+ KG PAP N+ VPPY
Sbjct: 133 THLGCVPGLNQPTGNTADTCGGYGCPCHGSKFDLAGRVYKGAPAPYNLPVPPY 185
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 223 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 282 WRGKPLFIRHR 292
W+GKP+FI R
Sbjct: 73 WQGKPVFIMRR 83
>gi|114331108|ref|YP_747330.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrosomonas
eutropha C91]
gi|114308122|gb|ABI59365.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Nitrosomonas
eutropha C91]
Length = 201
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 22/158 (13%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
F+ SM S A A +EVD++ + G +T +WRGKP+++ RT + +D + N Q
Sbjct: 36 FLRSMMPSERAKAAGAPVEVDISKLEPGMLLTAEWRGKPVWVLKRTSEMLDDLKKLN-DQ 94
Query: 115 LRDPQADSD----------RVKDPSWLVIIGICTHLGCVPI-------ANAG-DW-GGYY 155
L DP ++ D R P LV++G+CTHLGC P+ A+ G DW GG++
Sbjct: 95 LADPNSERDQQPPYAQNPTRSIKPQILVVLGVCTHLGCSPVYRKDIAPADLGEDWLGGFF 154
Query: 156 CPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
CPCHGS +D +GR+ K PAPTN+ VPPY + + L+
Sbjct: 155 CPCHGSKFDLAGRVYKNVPAPTNLVVPPYTYLSDNQLL 192
>gi|384082087|ref|ZP_09993262.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [gamma
proteobacterium HIMB30]
Length = 204
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 103/185 (55%), Gaps = 23/185 (12%)
Query: 28 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVT 86
T R+ F + G ++ + V A V F++S SA A A ++VD++ I G+ +
Sbjct: 15 TSRRKF---LVGATTAMAAVGAVGVATPFVASWHPSAKAKAAGAPVKVDVSKILPGEQIR 71
Query: 87 FKWRGKPLFIRHRTQKEIDTEQ-------NTNISQLRDPQ--ADSDRVKDPSWLVIIGIC 137
+WRGKP+FI RT + +++ + + N Q + P A+ R + V++GIC
Sbjct: 72 AEWRGKPVFILRRTPEMLESLKAISNEVADPNSEQPQQPAYAANEARAINAEIAVLVGIC 131
Query: 138 THLGCVP-------IANAGD-W-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGD 187
THLGC P + GD W GGY+CPCHGS +D +GR+ K PAPTN+ VPP+ +
Sbjct: 132 THLGCSPQFRPEVGAPDLGDDWQGGYFCPCHGSKFDLAGRVYKAVPAPTNLLVPPHSYES 191
Query: 188 EGILI 192
+ +LI
Sbjct: 192 DNVLI 196
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 221 TQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVT 279
T R+ F + G ++ + V A V F++S SA A A ++VD++ I G+ +
Sbjct: 15 TSRRKF---LVGATTAMAAVGAVGVATPFVASWHPSAKAKAAGAPVKVDVSKILPGEQIR 71
Query: 280 FKWRGKPLFIRHR 292
+WRGKP+FI R
Sbjct: 72 AEWRGKPVFILRR 84
>gi|345871994|ref|ZP_08823934.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thiorhodococcus drewsii AZ1]
gi|343919528|gb|EGV30274.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Thiorhodococcus drewsii AZ1]
Length = 197
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 23/188 (12%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 85
E + + ++ +S+VG V + F+ SM+ SA A A +E D+ + G +
Sbjct: 4 EVENRGRRRLLVAATSLVGAVGVGYALVPFVQSMNPSARARAAGAPVEADIGKLEPGALL 63
Query: 86 TFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA----------DSDRVKDPSWLVIIG 135
KWRGKP+++ HRT + +N +L DP++ + R P +LV IG
Sbjct: 64 RVKWRGKPVWVVHRTPAML-AALPSNDPKLVDPESSVPQQPSYCQNPTRSIKPEYLVAIG 122
Query: 136 ICTHLGCVPIAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF 185
ICTHLGC P DW GG++CPCHGS +D + R+ KG PAPTN+ +P Y +
Sbjct: 123 ICTHLGCSPTYRPEVAPDDLGADWKGGFFCPCHGSRFDLAARVFKGVPAPTNLVIPKYTY 182
Query: 186 -GDEGILI 192
D ILI
Sbjct: 183 LSDTTILI 190
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSV 278
E + + ++ +S+VG V + F+ SM+ SA A A +E D+ + G +
Sbjct: 4 EVENRGRRRLLVAATSLVGAVGVGYALVPFVQSMNPSARARAAGAPVEADIGKLEPGALL 63
Query: 279 TFKWRGKPLFIRHR 292
KWRGKP+++ HR
Sbjct: 64 RVKWRGKPVWVVHR 77
>gi|421853322|ref|ZP_16285998.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371478430|dbj|GAB31201.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 212
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 23/173 (13%)
Query: 30 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQ-LRDPQADSD----------RVKDPSWLVIIGIC 137
W+GKP+FI RT +EI Q+ +++ LRD ++ ++ R P + V +GIC
Sbjct: 73 WQGKPVFIMRRTPEEIALLQDHALAEKLRDAESTANQQPAYARNWHRSLVPEYGVYVGIC 132
Query: 138 THLGCVPIAN------AGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
THLGCVP N A GGY CPCHGS +D +GR+ KG PAP N+ VPPY
Sbjct: 133 THLGCVPGLNQPTGNTADTCGGYGCPCHGSKFDLAGRVYKGAPAPYNLPVPPY 185
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 223 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 282 WRGKPLFIRHR 292
W+GKP+FI R
Sbjct: 73 WQGKPVFIMRR 83
>gi|421849909|ref|ZP_16282881.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371459329|dbj|GAB28084.1| ubiquinol-cytochrome c reductase iron-sulfur subunit [Acetobacter
pasteurianus NBRC 101655]
Length = 212
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 23/173 (13%)
Query: 30 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 88
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 89 WRGKPLFIRHRTQKEIDTEQNTNISQ-LRDPQADSD----------RVKDPSWLVIIGIC 137
W+GKP+FI RT +EI Q+ +++ LRD ++ ++ R P + V +GIC
Sbjct: 73 WQGKPVFIMRRTPEEIALLQDHALAEKLRDAESTANQQPAYARNWHRSLVPEYGVYVGIC 132
Query: 138 THLGCVPIAN------AGDWGGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPY 183
THLGCVP N A GGY CPCHGS +D +GR+ KG PAP N+ VPPY
Sbjct: 133 THLGCVPGLNQPTGNTADTCGGYGCPCHGSKFDLAGRVYKGAPAPYNLPVPPY 185
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 223 RKAFTYMIAGGSSVVGMV-CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFK 281
R+ F ++ +V G+ CA V SASA + ++VD++ + GQ +T
Sbjct: 17 RRDFLGIVTTAGTVTGLAACAVPFVQSLKPQDSASAHL----PVDVDISKLTPGQQMTVV 72
Query: 282 WRGKPLFIRHR 292
W+GKP+FI R
Sbjct: 73 WQGKPVFIMRR 83
>gi|365105818|ref|ZP_09334867.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citrobacter
freundii 4_7_47CFAA]
gi|363643000|gb|EHL82331.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Citrobacter
freundii 4_7_47CFAA]
Length = 183
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 3/125 (2%)
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPS 129
I+V L + GQ+V W+G+ + I HRT EI T ++ ++ L DPQ DS RV P
Sbjct: 55 IDVSLAGVAAGQTVRRVWQGRLILIHHRTPDEIITARSADLDTLIDPQPDSARVSAAHPQ 114
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+ G C H GCVP A G G + CPCHGS +D SGR+ +GPA N+ +P Y +G
Sbjct: 115 WLVVQGYCPHAGCVPNARPGGMG-WICPCHGSEFDTSGRVTRGPATANLAIPDYVIHSDG 173
Query: 190 ILIRM 194
++R+
Sbjct: 174 QVVRI 178
>gi|422321895|ref|ZP_16402939.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Achromobacter
xylosoxidans C54]
gi|317403222|gb|EFV83742.1| ubiquinol-cytochrome C reductase iron-sulfur subunit [Achromobacter
xylosoxidans C54]
Length = 213
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 100/188 (53%), Gaps = 27/188 (14%)
Query: 20 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 79
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAIPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 80 PEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQA-----------DSDRVKDP 128
P G T +WRGKP++I HR+ ++I T + L DPQ+ + R + P
Sbjct: 71 PVGTMKTVEWRGKPVWIIHRSPEQI-AGLKTQDALLADPQSKRPGFTPKYAENEGRSRKP 129
Query: 129 SWLVIIGICTHLGCVPIAN---------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTN 177
V +GICTHLGC P ++ W GG+ CPCHGS +D +GR+ K PAP N
Sbjct: 130 EIFVCVGICTHLGCSPTSHFETGGGGGMGASWQGGFLCPCHGSTFDLAGRVYKNKPAPDN 189
Query: 178 MEVPPYQF 185
+EVPPYQ+
Sbjct: 190 LEVPPYQY 197
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 213 NPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLI 272
+P+ + ++R T A G V G+ A +V+ F S A A A A +EVD+ I
Sbjct: 15 DPNLPPDPSRRFWVTTACAVGG-VAGVATAIPLVSTFSPSEKARA---AGAPVEVDIGDI 70
Query: 273 PEGQSVTFKWRGKPLFIRHR 292
P G T +WRGKP++I HR
Sbjct: 71 PVGTMKTVEWRGKPVWIIHR 90
>gi|336316799|ref|ZP_08571688.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rheinheimera
sp. A13L]
gi|335878964|gb|EGM76874.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Rheinheimera
sp. A13L]
Length = 196
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 94/172 (54%), Gaps = 21/172 (12%)
Query: 41 SSVVGMVCAKSVVNQFISSMSASADV-LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 99
+SVVG V A FI+S + S A A + D++ + +GQ + +WRGKP++I R
Sbjct: 18 TSVVGGVGAIGAAVPFIASWNPSEKAKQAGAAVTADISKLEDGQLIRVEWRGKPVWIVKR 77
Query: 100 TQKEIDTEQNTNISQLRDPQAD----------SDRVKDPSWLVIIGICTHLGCVPIANAG 149
T ++T + +LRDP ++ + R K P V +GICTHLGC P
Sbjct: 78 TPAMLETLTKFD-DKLRDPASEEPQQPDYAKNTHRSKKPEIFVAVGICTHLGCSPTYIMK 136
Query: 150 DW--------GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGILI 192
D+ G++CPCHGS YD +GR+ G PAPTN+ +PPY F D+ +I
Sbjct: 137 DFEAQVEGMPSGFFCPCHGSTYDMAGRVFSGVPAPTNLMIPPYMFVDDTTII 188
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 234 SSVVGMVCAKSVVNQFISSMSASADV-LAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SVVG V A FI+S + S A A + D++ + +GQ + +WRGKP++I R
Sbjct: 18 TSVVGGVGAIGAAVPFIASWNPSEKAKQAGAAVTADISKLEDGQLIRVEWRGKPVWIVKR 77
>gi|126665264|ref|ZP_01736247.1| probable iron-sulfur protein [Marinobacter sp. ELB17]
gi|126630634|gb|EBA01249.1| probable iron-sulfur protein [Marinobacter sp. ELB17]
Length = 197
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 97/174 (55%), Gaps = 22/174 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ G ++ VG V F++S + SA A A + V+++ + GQ VT +WRG P+
Sbjct: 13 FLVGATAAVGGVGIVGAAVPFVASWNPSAKAEAAGAPVTVNVDKVEPGQQVTVEWRGTPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQ----------ADSDRVKDPSWLVIIGICTHLGCVP 144
++ RT + +D + + ++RDPQ AD R P V++GICTHLGCVP
Sbjct: 73 WLIRRTTEMLDNIEKLD-DKVRDPQSAEPQQPEYAADKYRSIKPELAVLVGICTHLGCVP 131
Query: 145 -----IANAG---DW-GGYYCPCHGSHYDASGRIR-KGPAPTNMEVPPYQFGDE 188
+A A DW GG +CPCHGS YD +GR+ PAP N+ VPPY++ D+
Sbjct: 132 SYRPEVAPADLGEDWLGGLFCPCHGSRYDMAGRVYFAQPAPLNLVVPPYRYDDD 185
>gi|222109384|ref|YP_002551648.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Acidovorax
ebreus TPSY]
gi|221728828|gb|ACM31648.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit [Acidovorax
ebreus TPSY]
Length = 204
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 23/152 (15%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
+SS++ S ++ A +EVD+ +P G +T +WRGKP+++ RT + + + Q +Q
Sbjct: 39 LVSSLAPSERARSLGAAVEVDIAGLPPGGMLTVEWRGKPVWVVRRTPEMLQSLQGLE-AQ 97
Query: 115 LRDPQADSDRVKD----------PSWLVIIGICTHLGCVPIA----------NAGDWGGY 154
L DP + D+ D P V IGICTHLGC P A AG GG+
Sbjct: 98 LADPASAKDQQPDYARNTHRSIQPEVFVAIGICTHLGCSPTAVAPGAPQSGLGAGWPGGF 157
Query: 155 YCPCHGSHYDASGRI-RKGPAPTNMEVPPYQF 185
+CPCHGS +D +GR+ R PAPTN+EVPP++F
Sbjct: 158 FCPCHGSTFDNAGRVYRNKPAPTNLEVPPHRF 189
>gi|352081553|ref|ZP_08952395.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodanobacter sp. 2APBS1]
gi|389796302|ref|ZP_10199357.1| ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit
[Rhodanobacter sp. 116-2]
gi|351682459|gb|EHA65555.1| ubiquinol-cytochrome c reductase, iron-sulfur subunit
[Rhodanobacter sp. 2APBS1]
gi|388448521|gb|EIM04502.1| ubiquinol cytochrome C oxidoreductase, iron-sulfur subunit
[Rhodanobacter sp. 116-2]
Length = 201
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 92/180 (51%), Gaps = 25/180 (13%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
+ ++VVG + S FI S SA A A + L I GQ +T WR P+
Sbjct: 13 FLTATTAVVGGIGIVSAAVPFIKSWEPSARAKAAGAPVTQSLAKIEAGQMLTVSWRSLPV 72
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQAD-------------SDRVKDPSWLVIIGICTHLG 141
F+ +RT+ ++ T + S+L DP++D R P WLV+IGICTHLG
Sbjct: 73 FVLNRTKAQLATLPQVD-SRLVDPKSDGASADQQPKYAQNEGRSIKPEWLVVIGICTHLG 131
Query: 142 CV--------PIANAGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQFGDEGIL 191
CV P +W GG+YCPCH S YD +GR+ G PAP N+ VPPY F D+ +
Sbjct: 132 CVPDFVPEIKPEPFDPEWKGGFYCPCHKSRYDLAGRVYAGVPAPKNLPVPPYHFIDDSTI 191
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,622,082,672
Number of Sequences: 23463169
Number of extensions: 185363928
Number of successful extensions: 434481
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 1238
Number of HSP's that attempted gapping in prelim test: 427156
Number of HSP's gapped (non-prelim): 4628
length of query: 292
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 151
effective length of database: 9,050,888,538
effective search space: 1366684169238
effective search space used: 1366684169238
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)