BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6642
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69BJ7|UCRI_SAISC Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Saimiri
sciureus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 274 bits (701), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 122/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 259 EVPTYEFLSDDMVV 272
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+YM+ ++V AKS+V QFIS
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKVFSYMVTATTAVGVTYAAKSIVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BJ8|UCRI_LAGLA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Lagothrix
lagotricha GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 274 bits (700), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 122/195 (62%), Positives = 154/195 (78%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVP Y+F GD+ +++
Sbjct: 259 EVPTYEFTGDDMVIV 273
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRRDRNPDKGQEETQ----RKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR DK + + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDKTKSSRESSDARKGFSYLVTAATAVGVTYAAKSIVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK3|UCRI_PONPY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pongo
pygmaeus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 272 bits (696), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 121/194 (62%), Positives = 152/194 (78%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D+R PDFS+YRR D + RK F+Y++ G ++V AK+VV QF+S
Sbjct: 79 SHTDVRVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNVVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++TFKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPIYEFTSDDMVI 272
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D+R PDFS+YRR D + RK F+Y++ G ++V AK+VV QF+S
Sbjct: 79 SHTDVRVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNVVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++TFKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMTFKWRGKPLFVRHR 179
>sp|Q69BJ9|UCRI_AOTAZ Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Aotus
azarae GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 271 bits (694), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 120/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLDRVKKPEWMILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDLVI 272
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AKS+V QF+S
Sbjct: 79 SHTDIKVPDFSDYRRSEVLDTTKSSRESSDARKGFSYLVTATTAVGVTYAAKSIVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK1|UCRI_CHLAE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Chlorocebus aethiops GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 270 bits (691), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 152/195 (77%), Gaps = 5/195 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEEEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQF-GDEGILI 192
EVPPY+F GD+ +++
Sbjct: 259 EVPPYEFTGDDVVVV 273
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+VV QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|P47985|UCRI_HUMAN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Homo
sapiens GN=UQCRFS1 PE=1 SV=2
Length = 274
Score = 269 bits (687), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK4|UCRI_GORGO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gorilla
gorilla gorilla GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 268 bits (686), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDIKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q9CR68|UCRI_MOUSE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Mus
musculus GN=Uqcrfs1 PE=1 SV=1
Length = 274
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 151/195 (77%), Gaps = 4/195 (2%)
Query: 2 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 57
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+
Sbjct: 78 FSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFV 137
Query: 58 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRD 117
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRD
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRD 197
Query: 118 PQADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTN 177
PQ D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N
Sbjct: 198 PQHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLN 257
Query: 178 MEVPPYQFGDEGILI 192
+EVP Y+F + +++
Sbjct: 258 LEVPAYEFTSDDVVV 272
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
Query: 195 LAHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFI 250
+H+D++ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+
Sbjct: 78 FSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFV 137
Query: 251 SSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SSMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 138 SSMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK5|UCRI_PANTR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
troglodytes GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 268 bits (685), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK6|UCRI_PANPA Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Pan
paniscus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 268 bits (685), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 150/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRLEVLDSTKSSRESSEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|P13272|UCRI_BOVIN Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Bos taurus
GN=UQCRFS1 PE=1 SV=3
Length = 274
Score = 267 bits (683), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 119/194 (61%), Positives = 151/194 (77%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPSYEFTSDDMVI 272
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+VV+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRPEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK2|UCRI_THEGE Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Theropithecus gelada GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 266 bits (681), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFIS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IGICTHLGCVPIANAGD+GGYYCPCHGSHYD SGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGICTHLGCVPIANAGDFGGYYCPCHGSHYDVSGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVPPY+F + +++
Sbjct: 259 EVPPYEFTSDDMVV 272
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK F+Y++ ++V AK+ V QFIS
Sbjct: 79 SHTDVKVPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFIS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IE++L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEINLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BK0|UCRI_COLPO Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Colobus
polykomos GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 266 bits (680), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDF YRR D + RK+F+YM+ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFCDYRRPEVLDSTKSSRESSEARKSFSYMVTAVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAMA IEV L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + +++
Sbjct: 259 EVPTYEFTSDDMVV 272
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDF YRR D + RK+F+YM+ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFCDYRRPEVLDSTKSSRESSEARKSFSYMVTAVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAMA IEV L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMAKIEVKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|Q69BJ6|UCRI_HYLSY Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Hylobates
syndactylus GN=UQCRFS1 PE=3 SV=1
Length = 274
Score = 265 bits (678), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI+ E +SQLRDP
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIEQEAAVELSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPAP N+
Sbjct: 199 QHDLDRVKRPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 259 EVPTYEFTSDDMVI 272
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+D++ PDFS+YRR D + RK F+Y++ ++V AK+ V QF+S
Sbjct: 79 SHTDVKVPDFSEYRRPEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|P0C7P4|UCRIL_HUMAN Putative cytochrome b-c1 complex subunit Rieske-like protein 1
OS=Homo sapiens GN=UQCRFS1P1 PE=5 SV=1
Length = 283
Score = 265 bits (676), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 118/194 (60%), Positives = 148/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 88 SHTDIKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 147
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHRTQKEI E +SQLRDP
Sbjct: 148 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTQKEIKQEAAVELSQLRDP 207
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D DRVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIR GPA N+
Sbjct: 208 QHDLDRVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRLGPATLNL 267
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F + ++I
Sbjct: 268 EVPTYEFTSDDMVI 281
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 72/101 (71%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS+YRR D + RK F+Y++ G ++V AK+ V QF+S
Sbjct: 88 SHTDIKVPDFSEYRRLEVLDSTKSSRESTEARKGFSYLVTGVTTVGVAYAAKNAVTQFVS 147
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLA+A IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 148 SMSASADVLALAKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 188
>sp|Q5ZLR5|UCRI_CHICK Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Gallus
gallus GN=UQCRFS1 PE=1 SV=1
Length = 272
Score = 265 bits (676), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 148/194 (76%), Gaps = 5/194 (2%)
Query: 4 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHRTQ EI+ E ++S+LRDPQ
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHRTQAEINQEAEVDVSKLRDPQ 197
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D DRVK P W++++G+CTHLGCVPIAN+GD+GGYYCPCHGSHYDASGRIRKGPAP N+E
Sbjct: 198 HDLDRVKKPEWVILVGVCTHLGCVPIANSGDFGGYYCPCHGSHYDASGRIRKGPAPYNLE 257
Query: 180 VPPYQF-GDEGILI 192
VP YQF GD+ +++
Sbjct: 258 VPTYQFVGDDLVVV 271
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 197 HSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
H+D+ PDFS YRR D RK F+Y++ + V AK+VV QFISS
Sbjct: 78 HNDVTVPDFSAYRREDVMDATTSSQTSSEDRKGFSYLVTATACVATAYAAKNVVTQFISS 137
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+SASADVLA++ IE+ L+ IPEG++V FKWRGKPLF+RHR
Sbjct: 138 LSASADVLALSKIEIKLSDIPEGKNVAFKWRGKPLFVRHR 177
>sp|P20788|UCRI_RAT Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Rattus
norvegicus GN=Uqcrfs1 PE=1 SV=2
Length = 274
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 149/194 (76%), Gaps = 4/194 (2%)
Query: 3 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 58
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 138
Query: 59 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDP 118
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHRT+KEID E +SQLRDP
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDP 198
Query: 119 QADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNM 178
Q D +RVK P W+++IG+CTHLGCVPIANAGD+GGYYCPCHGSHYDASGRIRKGPAP N+
Sbjct: 199 QHDLERVKKPEWVILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNL 258
Query: 179 EVPPYQFGDEGILI 192
EVP Y+F +++
Sbjct: 259 EVPTYEFTSGDVVV 272
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 71/101 (70%), Gaps = 4/101 (3%)
Query: 196 AHSDIRTPDFSKYRR----DRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFIS 251
+H+DI+ PDFS YRR D + RK F+Y++ ++V AK+ V+QF+S
Sbjct: 79 SHTDIKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNAVSQFVS 138
Query: 252 SMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
SMSASADVLAM+ IE+ L+ IPEG+++ FKWRGKPLF+RHR
Sbjct: 139 SMSASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHR 179
>sp|P07056|UCRI_NEUCR Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=NCU06606 PE=3 SV=1
Length = 231
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 133/185 (71%), Gaps = 6/185 (3%)
Query: 8 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 67
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 68 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD 127
AMA +EVDLN IPEG++V KWRGKP+FIRHRT EI+ N++ LRDP+ D+DRVK
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHRTPAEIEEANKVNVATLRDPETDADRVKK 164
Query: 128 PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGD 187
P WLV++G+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E+P Y+F +
Sbjct: 165 PEWLVMLGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRKGPAPLNLEIPLYEFPE 224
Query: 188 EGILI 192
EG L+
Sbjct: 225 EGKLV 229
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 6/92 (6%)
Query: 201 RTPDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVL 260
+ PDF KY P + F+Y + G + AKS + +F+ +MSASADVL
Sbjct: 51 KVPDFGKYMSKAPP------STNMLFSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVL 104
Query: 261 AMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
AMA +EVDLN IPEG++V KWRGKP+FIRHR
Sbjct: 105 AMAKVEVDLNAIPEGKNVIIKWRGKPVFIRHR 136
>sp|P08067|UCRI_YEAST Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RIP1 PE=1 SV=1
Length = 215
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 139/193 (72%), Gaps = 7/193 (3%)
Query: 1 MLAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 59
+ + S RTP+F ++ N DKG +++ Y + G ++ AKS V FISS
Sbjct: 28 LASKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISS 81
Query: 60 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQ 119
M+A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHRT EI + ++S L+DPQ
Sbjct: 82 MTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHRTPHEIQEANSVDMSALKDPQ 141
Query: 120 ADSDRVKDPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNME 179
D+DRVKDP WL+++GICTHLGCVPI AGD+GG++CPCHGSHYD SGRIRKGPAP N+E
Sbjct: 142 TDADRVKDPQWLIMLGICTHLGCVPIGEAGDFGGWFCPCHGSHYDISGRIRKGPAPLNLE 201
Query: 180 VPPYQFGDEGILI 192
+P Y+F + +++
Sbjct: 202 IPAYEFDGDKVIV 214
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 7/100 (7%)
Query: 194 MLAHSDIRTPDFSKYRRDRN-PDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISS 252
+ + S RTP+F ++ N DKG +++ Y + G ++ AKS V FISS
Sbjct: 28 LASKSTYRTPNFDDVLKENNDADKG------RSYAYFMVGAMGLLSSAGAKSTVETFISS 81
Query: 253 MSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
M+A+ADVLAMA +EV+L IP G++V KW+GKP+FIRHR
Sbjct: 82 MTATADVLAMAKVEVNLAAIPLGKNVVVKWQGKPVFIRHR 121
>sp|Q09154|UCRI_SCHPO Cytochrome b-c1 complex subunit Rieske, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rip1 PE=2 SV=2
Length = 228
Score = 221 bits (564), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 6/183 (3%)
Query: 10 PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM 69
PDFS+Y+ D+ + +Y + G + A++ V+ F++S SASADVLAM
Sbjct: 51 PDFSEYQTKSTGDRS------RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAM 104
Query: 70 ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPS 129
+ EVDL+ IPEG+++ KW+GKP+FIRHRT +EI + +IS LRDPQADSDRV+ P
Sbjct: 105 SKAEVDLSKIPEGKNLVVKWQGKPVFIRHRTPEEIQEANSVDISTLRDPQADSDRVQKPE 164
Query: 130 WLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEG 189
WLV+IG+CTHLGCVPI AGD+GG++CPCHGSHYD SGRIR+GPAP N+ +P Y F
Sbjct: 165 WLVMIGVCTHLGCVPIGEAGDYGGWFCPCHGSHYDISGRIRRGPAPLNLAIPAYTFEGSK 224
Query: 190 ILI 192
I+I
Sbjct: 225 III 227
Score = 80.9 bits (198), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Query: 188 EGILIRMLAHSDIRT-------PDFSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMV 240
+G ++ + + IRT PDFS+Y+ D+ + +Y + G +
Sbjct: 29 KGSMMTIPKFTSIRTYTDSPEMPDFSEYQTKSTGDRS------RVISYAMVGTMGALTAA 82
Query: 241 CAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
A++ V+ F++S SASADVLAM+ EVDL+ IPEG+++ KW+GKP+FIRHR
Sbjct: 83 GAQATVHDFLASWSASADVLAMSKAEVDLSKIPEGKNLVVKWQGKPVFIRHR 134
>sp|P51133|UCRI3_TOBAC Cytochrome b-c1 complex subunit Rieske-3, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 126/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT+++I+ + ++ LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTEEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 161 VKWRGKPVFIRRR 173
>sp|P51135|UCRI5_TOBAC Cytochrome b-c1 complex subunit Rieske-5, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 268
Score = 214 bits (544), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 125/166 (75%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT ++I+ + ++ LRDPQ D++RVK+P WLV+IG+CTHLGC+P+
Sbjct: 161 VKWRGKPVFIRRRTDEDINLANSVDLGSLRDPQQDAERVKNPEWLVVIGVCTHLGCIPLP 220
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 221 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFMEENKLL 266
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 101 DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVT 160
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 161 VKWRGKPVFIRRR 173
>sp|P51132|UCRI2_TOBAC Cytochrome b-c1 complex subunit Rieske-2, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 272
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 93 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 149
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I+ + ++ LRDPQ D++RVK P WL
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWL 209
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 210 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 269
Query: 192 I 192
+
Sbjct: 270 L 270
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 93 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 149
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 150 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 177
>sp|P49729|UCRI1_TOBAC Cytochrome b-c1 complex subunit Rieske-1, mitochondrial (Fragment)
OS=Nicotiana tabacum PE=2 SV=1
Length = 258
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 79 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALAS 135
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + ++ LRDPQ D++RVK+P WL
Sbjct: 136 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQDAERVKNPEWL 195
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 196 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 255
Query: 192 I 192
+
Sbjct: 256 L 256
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 79 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALAS 135
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 136 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 163
>sp|P49727|UCRI_MAIZE Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Zea mays
PE=2 SV=1
Length = 273
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 92/181 (50%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I + +++ LR P+ D++RVK+P WL
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVASLRHPEQDAERVKNPEWL 210
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 211 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPFNLEVPTYSFLEENKL 270
Query: 192 I 192
+
Sbjct: 271 L 271
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ +Y +R P + ++AF Y + G + + +V +F+ SMSAS DVLA+A+
Sbjct: 94 YDEYNHERYP---PGDPSKRAFAYFVLSGGRFIYASLLRLLVLKFVLSMSASKDVLALAS 150
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 151 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 178
>sp|P51134|UCRI4_TOBAC Cytochrome b-c1 complex subunit Rieske-4, mitochondrial
OS=Nicotiana tabacum PE=2 SV=1
Length = 236
Score = 211 bits (538), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 12 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 71
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 57 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 113
Query: 72 IEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWL 131
+EVDL+ I G +VT KWRGKP+FIR RT+ +I+ + ++ LRDPQ D++RVK P WL
Sbjct: 114 LEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDINLANSVDLGSLRDPQQDAERVKSPEWL 173
Query: 132 VIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGIL 191
V+IG+CTHLGC+P+ NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L
Sbjct: 174 VVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKL 233
Query: 192 I 192
+
Sbjct: 234 L 234
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 205 FSKYRRDRNPDKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMAT 264
+ ++ +R P + ++AF Y + G V + ++ +F+ SMSAS DVLA+A+
Sbjct: 57 YDEHNHERYPPG---DPSKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALAS 113
Query: 265 IEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
+EVDL+ I G +VT KWRGKP+FIR R
Sbjct: 114 LEVDLSSIEPGTTVTVKWRGKPVFIRRR 141
>sp|P37841|UCRI_SOLTU Cytochrome b-c1 complex subunit Rieske, mitochondrial OS=Solanum
tuberosum GN=FES1 PE=1 SV=1
Length = 265
Score = 211 bits (536), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 123/166 (74%)
Query: 27 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 86
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 87 FKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCVPIA 146
KWRGKP+FIR RT +I + ++ LRDPQ D++RVK+P WLV++G+CTHLGC+P+
Sbjct: 158 VKWRGKPVFIRRRTDDDIKLANSVDLGTLRDPQQDAERVKNPEWLVVVGVCTHLGCIPLP 217
Query: 147 NAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
NAGD+GG++CPCHGSHYD SGRIRKGPAP N+EVP Y F +E L+
Sbjct: 218 NAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLEENKLL 263
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 220 ETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVT 279
+ ++AF Y + G V + ++ +F+ SMSAS DVLA+A++EVDL+ I G +VT
Sbjct: 98 DPSKRAFAYFVLTGGRFVYASSVRLLILKFVLSMSASKDVLALASLEVDLSSIEPGSTVT 157
Query: 280 FKWRGKPLFIRHR 292
KWRGKP+FIR R
Sbjct: 158 VKWRGKPVFIRRR 170
>sp|P23136|UCRI_RHORU Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodospirillum rubrum GN=petA PE=1 SV=2
Length = 183
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 118/174 (67%), Gaps = 9/174 (5%)
Query: 24 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 83
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 84 SVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVKDPSWLVIIGICTHLGCV 143
++T WRGKP+F+RHRTQKEI + + + LRDPQ D RV+ WLV++G+CTHLGC+
Sbjct: 68 AITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCI 127
Query: 144 PIAN-----AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDEGILI 192
P+ GD+ G++CPCHGSHYD++GRIRKGPAP N+ VPPY F D+ ++
Sbjct: 128 PLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVL 181
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 217 GQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQ 276
G E ++R Y G++ VG V V FI M+ +AD LA+A+ EVD++ I EGQ
Sbjct: 12 GGESSRRDFLIY----GTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQ 67
Query: 277 SVTFKWRGKPLFIRHR 292
++T WRGKP+F+RHR
Sbjct: 68 AITVTWRGKPVFVRHR 83
>sp|Q92IR2|UCRI_RICCN Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=petA PE=3
SV=1
Length = 177
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 117/166 (70%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + +G VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAVC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+AD RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + +G VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAIGAVC---TLWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>sp|Q4UKR6|UCRI_RICFE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=petA PE=3
SV=1
Length = 177
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 116/166 (69%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT +I + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+AN G++ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 123 LGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 168
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG VC + + S++ SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFMVLTASSVAAVGAVCT---LWPLVDSLNPSADVLALSSIEVDLSNIAV 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPVFITNR 80
>sp|Q1RIA5|UCRI_RICBR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
bellii (strain RML369-C) GN=petA PE=3 SV=1
Length = 186
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 116/163 (71%), Gaps = 5/163 (3%)
Query: 25 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 84
+ +T R+ F + A + VG C + I+S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLINSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 85 VTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTHLGC 142
VT KW+GKP+FI +RT +I + +S+L DP+ D DRVK +WLV IGICTHLGC
Sbjct: 75 VTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEEDQDRVKAGHDNWLVTIGICTHLGC 134
Query: 143 VPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
VP+AN GD+ G++CPCHGS YD+SGR+R+GPAP N+ VPPY F
Sbjct: 135 VPLANQGDYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTF 177
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 218 QEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQS 277
+ +T R+ F + A + VG C + I+S++ SADVLA+++IEVDL+ I GQ+
Sbjct: 18 RSKTSRRDFMVLTASSVAAVGAACT---LWPLINSLNPSADVLALSSIEVDLSNIAVGQT 74
Query: 278 VTFKWRGKPLFIRHR 292
VT KW+GKP+FI +R
Sbjct: 75 VTVKWQGKPVFITNR 89
>sp|P51130|UCRI_BRAJA Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Bradyrhizobium japonicum (strain USDA 110) GN=petA
PE=2 SV=1
Length = 176
Score = 172 bits (435), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 100/133 (75%), Gaps = 3/133 (2%)
Query: 56 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HRT+K+ID + N++
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVAS 94
Query: 115 LRDPQADSDRVKD--PSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ+D RVK WLV+IGICTHLGC+PIA+ G++ G++CPCHGS YD+SGRIR+G
Sbjct: 95 LPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNYDGFFCPCHGSQYDSSGRIRQG 154
Query: 173 PAPTNMEVPPYQF 185
PAP N+ VPPYQF
Sbjct: 155 PAPANLPVPPYQF 167
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 249 FISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FIS M+ A +A A IEVDL+ I EGQ + WRGKP++I HR
Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHR 79
>sp|P81380|UCRI_RHOVI Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2
Length = 179
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/135 (57%), Positives = 100/135 (74%), Gaps = 3/135 (2%)
Query: 56 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQ 114
FI+ M+ +A + A A I++D++ + EGQ V WRGKP+FIRHRT KEI +E+ ++
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGA 93
Query: 115 LRDPQADSDRVK--DPSWLVIIGICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKG 172
L DPQ DS RVK WLV+ CTHLGC+P+ + GDWGG++CPCHGS YDASGR+RKG
Sbjct: 94 LIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDWGGWFCPCHGSQYDASGRVRKG 153
Query: 173 PAPTNMEVPPYQFGD 187
PAPTN+ VPPY+F D
Sbjct: 154 PAPTNLPVPPYEFVD 168
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 249 FISSMSA-SADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
FI+ M+ +A + A A I++D++ + EGQ V WRGKP+FIRHR
Sbjct: 34 FITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHR 78
>sp|Q9ZDQ5|UCRI_RICPR Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
prowazekii (strain Madrid E) GN=petA PE=3 SV=1
Length = 177
Score = 171 bits (432), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 85/166 (51%), Positives = 114/166 (68%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG CA I S + SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSFNPSADVLALSSIEVDLSNIAI 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT EI + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP+++ G++ G++CPCHGS YD+SGR+RKGPAP N+ VPPY F
Sbjct: 123 LGCVPLSHKGEYNGWFCPCHGSQYDSSGRVRKGPAPLNLAVPPYIF 168
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG CA I S + SADVLA+++IEVDL+ I
Sbjct: 6 DNKNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSFNPSADVLALSSIEVDLSNIAI 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>sp|Q68XA0|UCRI_RICTY Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=petA PE=3
SV=1
Length = 177
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 113/166 (68%), Gaps = 5/166 (3%)
Query: 22 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 81
D ++T R+ F + A + VG CA I S++ S DVLA+++IEVDL+ I
Sbjct: 6 DNRNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSLNPSTDVLALSSIEVDLSSIAI 62
Query: 82 GQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQLRDPQADSDRVK--DPSWLVIIGICTH 139
GQ+VT KW+GKP+FI +RT I + + +S+L DP+ D RVK +WLV IGICTH
Sbjct: 63 GQTVTVKWQGKPIFITNRTPDGIASARAVKMSELIDPEKDEVRVKAGHDNWLVTIGICTH 122
Query: 140 LGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQF 185
LGCVP++N G++ G++CPCHGS YD+SGR+RKGPA N+ VPPY F
Sbjct: 123 LGCVPLSNQGEYNGWFCPCHGSQYDSSGRVRKGPASLNLVVPPYIF 168
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 215 DKGQEETQRKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPE 274
D ++T R+ F + A + VG CA I S++ S DVLA+++IEVDL+ I
Sbjct: 6 DNRNKQTTRRDFIVLTASSVAAVGAACA---FWPIIDSLNPSTDVLALSSIEVDLSSIAI 62
Query: 275 GQSVTFKWRGKPLFIRHR 292
GQ+VT KW+GKP+FI +R
Sbjct: 63 GQTVTVKWQGKPIFITNR 80
>sp|D5ANZ2|UCRI_RHOCB Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
GN=petA PE=3 SV=1
Length = 191
Score = 158 bits (399), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 112/178 (62%), Gaps = 22/178 (12%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y ++ G+V + V I+ M+ASADV AMA+I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------------DRVKDPSWL 131
RGKP+FIR R +K+I+ ++ + LRD A++ D WL
Sbjct: 68 RGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWL 127
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V++G+CTHLGCVP+ + +GD+GG++CPCHGSHYD++GRIRKGPAP N+++P F DE
Sbjct: 128 VMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDE 185
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y ++ G+V + V I+ M+ASADV AMA+I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMASIFVDVSAVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 68 RGKPVFIRRR 77
>sp|P0CY48|UCRI_RHOCA Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
capsulatus GN=petA PE=1 SV=1
Length = 191
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 112/178 (62%), Gaps = 22/178 (12%)
Query: 30 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 89
R+ F Y ++ G+V + V I+ M+ASADV AM++I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMSSIFVDVSAVEVGTQLTVKW 67
Query: 90 RGKPLFIRHRTQKEIDTEQNTNISQLRDPQADS------------------DRVKDPSWL 131
RGKP+FIR R +K+I+ ++ + LRD A++ D WL
Sbjct: 68 RGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRSLAAFDGTNTGEWL 127
Query: 132 VIIGICTHLGCVPIAN-AGDWGGYYCPCHGSHYDASGRIRKGPAPTNMEVPPYQFGDE 188
V++G+CTHLGCVP+ + +GD+GG++CPCHGSHYD++GRIRKGPAP N+++P F DE
Sbjct: 128 VMLGVCTHLGCVPMGDKSGDFGGWFCPCHGSHYDSAGRIRKGPAPRNLDIPVAAFVDE 185
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 223 RKAFTYMIAGGSSVVGMVCAKSVVNQFISSMSASADVLAMATIEVDLNLIPEGQSVTFKW 282
R+ F Y ++ G+V + V I+ M+ASADV AM++I VD++ + G +T KW
Sbjct: 11 RRDFLYH---ATAATGVVVTGAAVWPLINQMNASADVKAMSSIFVDVSAVEVGTQLTVKW 67
Query: 283 RGKPLFIRHR 292
RGKP+FIR R
Sbjct: 68 RGKPVFIRRR 77
>sp|P05417|UCRI_PARDE Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus
denitrificans GN=petA PE=1 SV=1
Length = 190
Score = 154 bits (388), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 100/147 (68%), Gaps = 14/147 (9%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR RT+ EI + ++ QL
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQL 97
Query: 116 RD-----------PQADSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHGS 161
D P D +R D + WLV+IG+CTHLGCVPI + AGD+GG++CPCHGS
Sbjct: 98 IDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDFGGWFCPCHGS 157
Query: 162 HYDASGRIRKGPAPTNMEVPPYQFGDE 188
HYD SGRIR+GPAP N+ +P +F D+
Sbjct: 158 HYDTSGRIRRGPAPQNLHIPVAEFLDD 184
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
++ M+ SADV A+A+I+VD++ + G +T KW GKP+FIR R
Sbjct: 38 LVNQMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRR 81
>sp|Q02762|UCRI_RHOSH Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter
sphaeroides GN=petA PE=1 SV=1
Length = 187
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 15/148 (10%)
Query: 56 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHRTQKEIDTEQNTNISQL 115
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR RT+ +I+ ++ + QL
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQL 93
Query: 116 RDPQA------------DSDRVKDPS--WLVIIGICTHLGCVPIAN-AGDWGGYYCPCHG 160
D A D +R D + WLV+ G+CTHLGCVPI +GD+GG++CPCHG
Sbjct: 94 VDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDFGGWFCPCHG 153
Query: 161 SHYDASGRIRKGPAPTNMEVPPYQFGDE 188
SHYD++GRIRKGPAP N+ +P +F DE
Sbjct: 154 SHYDSAGRIRKGPAPENLPIPLAKFIDE 181
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 249 FISSMSASADVLAMATIEVDLNLIPEGQSVTFKWRGKPLFIRHR 292
I+ M+ SADV A+A+I VD++ + G +T K+ GKP+FIR R
Sbjct: 34 LINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRR 77
>sp|O31214|UCRI_ALLVD Ubiquinol-cytochrome c reductase iron-sulfur subunit
OS=Allochromatium vinosum (strain ATCC 17899 / DSM 180 /
NBRC 103801 / D) GN=petA PE=3 SV=2
Length = 207
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 23/179 (12%)
Query: 36 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 94
++ +SVVG V A + F++SM+ SA A A +E D++ + G + KWRGKP+
Sbjct: 23 VLVAATSVVGAVGAGYALVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGKPV 82
Query: 95 FIRHRTQKEIDTEQNTNISQLRDPQADSDRVKD----------PSWLVIIGICTHLGCVP 144
++ HR+ E+ ++N +L DP ++ + D P +LV IGICTHLGC P
Sbjct: 83 WVVHRS-PEMLAALSSNDPKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSP 141
Query: 145 IAN--------AGDW-GGYYCPCHGSHYDASGRIRKG-PAPTNMEVPPYQF-GDEGILI 192
DW GG++CPCHGS +D + R+ K PAPTN+ +P + + D ILI
Sbjct: 142 TYRPEFGPDDLGSDWKGGFHCPCHGSRFDLAARVFKNVPAPTNLVIPKHVYLNDTTILI 200
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 229 MIAGGSSVVGMVCAKSVVNQFISSMSASADVLAM-ATIEVDLNLIPEGQSVTFKWRGKPL 287
++ +SVVG V A + F++SM+ SA A A +E D++ + G + KWRGKP+
Sbjct: 23 VLVAATSVVGAVGAGYALVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGKPV 82
Query: 288 FIRHR 292
++ HR
Sbjct: 83 WVVHR 87
>sp|Q7VDC0|UCRI_PROMA Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=petC PE=3
SV=1
Length = 178
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 127 DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ G ICTHLGCV N+G Y CPCHGS YDA+G++ +GPAP
Sbjct: 86 DPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGA-NKYICPCHGSQYDANGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRTPD 204
++ + D+ +L+ +D RT D
Sbjct: 145 LSLALTHIDIDDDNVLVSQWTETDFRTGD 173
>sp|Q46GW1|UCRI_PROMT Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL2A) GN=petC PE=3 SV=1
Length = 178
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 127 DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ G ICTHLGCV N+G Y CPCHGS YD++G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGA-NKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRT 202
++ + D+ +L+ +D RT
Sbjct: 145 LSLAIAHVSIEDDQVLVSQWTETDFRT 171
>sp|A2C0R9|UCRI_PROM1 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL1A) GN=petC PE=3 SV=1
Length = 178
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 127 DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ G ICTHLGCV N+G Y CPCHGS YD++G++ +GPAP
Sbjct: 86 DPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGA-NKYMCPCHGSQYDSTGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRT 202
++ + D+ +L+ +D RT
Sbjct: 145 LSLAIAHVSIEDDQVLVSQWTETDFRT 171
>sp|A9BE84|UCRI_PROM4 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9211) GN=petC PE=3 SV=1
Length = 178
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 118 PQADSDRVK----DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSH 162
P D V+ DP++L++ G ICTHLGCV N+G Y CPCHGS
Sbjct: 73 PAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGA-NKYICPCHGSQ 131
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDIRT 202
YDA+G++ +GPAP ++ + D+ + + A +D RT
Sbjct: 132 YDANGKVVRGPAPLSLALAHIDVEDDKVFVSQWAETDFRT 171
>sp|Q3AWL7|UCRI_SYNS9 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9902) GN=petC PE=3 SV=1
Length = 178
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 118 PQADSDRVK----DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSH 162
P+ D V+ DP++L++ G ICTHLGCV N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDIRTPD 204
YDA+G++ +GPAP ++ + D+ + + + +D RT D
Sbjct: 132 YDATGKVVRGPAPLSLALANVSVEDDNVFVSEWSETDFRTGD 173
>sp|Q7U566|UCRI_SYNPX Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH8102) GN=petC PE=3 SV=1
Length = 178
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 118 PQADSDRVK----DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSH 162
P+ D V+ DP++L++ G ICTHLGCV N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDIRTPD 204
YDA+G++ +GPAP ++ + ++ + + +D RT D
Sbjct: 132 YDATGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGD 173
>sp|A5GRU8|UCRI_SYNR3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain RCC307) GN=petC PE=3 SV=1
Length = 178
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 12/87 (13%)
Query: 127 DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ G ICTHLGCV NAG + CPCHGS YDA+G++ +GPAP
Sbjct: 86 DPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGA-NKFMCPCHGSQYDATGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRT 202
++ + ++ + + + +D RT
Sbjct: 145 LSLALAHVNVENDNVFVSQWSETDFRT 171
>sp|Q3ALY0|UCRI_SYNSC Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9605) GN=petC PE=3 SV=1
Length = 178
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 118 PQADSDRVK----DPSWLVIIG-----------ICTHLGCVPIANAGDWGGYYCPCHGSH 162
P+ D V+ DP++L++ G ICTHLGCV N+G + CPCHGS
Sbjct: 73 PEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGA-NKFMCPCHGSQ 131
Query: 163 YDASGRIRKGPAPTNMEVPPYQFGDEGILIRMLAHSDIRTPD 204
YD++G++ +GPAP ++ + ++ + + +D RT D
Sbjct: 132 YDSTGKVVRGPAPLSLALANVSVENDNVFVSQWTETDFRTGD 173
>sp|A3PBI5|UCRI_PROM0 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9301) GN=petC PE=3 SV=1
Length = 178
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 12/87 (13%)
Query: 127 DPSWLVI-----IG------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ IG ICTHLGCV ++G + CPCHGS YD +G++ +GPAP
Sbjct: 86 DPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGA-NKFICPCHGSQYDTNGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRT 202
++ + D+ +L++ + +D RT
Sbjct: 145 LSLALAHVDIEDDAVLVKQWSETDFRT 171
>sp|Q31C72|UCRI_PROM9 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9312) GN=petC PE=3 SV=1
Length = 178
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 12/87 (13%)
Query: 127 DPSWLVI-----IG------ICTHLGCVPIANAGDWGGYYCPCHGSHYDASGRIRKGPAP 175
DP++L++ IG ICTHLGCV ++G + CPCHGS YD +G++ +GPAP
Sbjct: 86 DPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGA-NKFICPCHGSQYDTNGKVVRGPAP 144
Query: 176 TNMEVPPYQFGDEGILIRMLAHSDIRT 202
++ + D+ +L++ + +D RT
Sbjct: 145 LSLALAHVDIEDDAVLVKQWSETDFRT 171
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,012,337
Number of Sequences: 539616
Number of extensions: 4347164
Number of successful extensions: 10858
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 10588
Number of HSP's gapped (non-prelim): 175
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)