BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6647
(62 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 37.4 bits (85), Expect = 0.002, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
M+RW R+ LVTGA +G + + L GL VVG A
Sbjct: 27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCA 63
>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|B Chain B, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|C Chain C, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|D Chain D, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|E Chain E, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|F Chain F, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|G Chain G, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
pdb|3TPC|H Chain H, Crystal Structure Of A Hypothtical Protein Sma1452 From
Sinorhizobium Meliloti 1021
Length = 257
Score = 31.6 bits (70), Expect = 0.11, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGL 36
R+ +VTGA S LG + + LA G TV+GL
Sbjct: 8 RVFIVTGASSGLGAAVTRXLAQEGATVLGL 37
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G+I LVTGA +G + + LA G V+G A
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTA 36
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier
Protein] Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E.
Coli In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E.
Coli In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E.
Coli In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E.
Coli In Complex With Nadp+
Length = 244
Score = 29.6 bits (65), Expect = 0.46, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G+I LVTGA +G + + LA G V+G A
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTA 36
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f
Mutant In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f
Mutant In Complex With Nadph Fragment
Length = 244
Score = 29.6 bits (65), Expect = 0.47, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G+I LVTGA +G + + LA G V+G A
Sbjct: 5 GKIALVTGASRGIGRAIAETLAARGAKVIGTA 36
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
Length = 247
Score = 29.3 bits (64), Expect = 0.61, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+R G+ LVTGA +G+ + LA G TV+
Sbjct: 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVI 34
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 29.3 bits (64), Expect = 0.63, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+R G+ LVTGA +G+ + LA G TV+
Sbjct: 2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVI 34
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 28.9 bits (63), Expect = 0.78, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
R V++TGA S LG +ELA G TV+
Sbjct: 17 RTVVITGANSGLGAVTARELARRGATVI 44
>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
pdb|3N74|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reduc Brucella Melitensis
Length = 261
Score = 28.5 bits (62), Expect = 0.96, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ L+TGA S GE + K A G VV
Sbjct: 9 GKVALITGAGSGFGEGMAKRFAKGGAKVV 37
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 43
>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AFN|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a
Resolution
pdb|4AG3|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|B Chain B, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|C Chain C, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
pdb|4AG3|D Chain D, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein)
Reductase (fabg) From Pseudomonas Aeruginosa In Complex
With Nadph At 1.8a Resolution
Length = 269
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + EL G V+G A
Sbjct: 27 GKVALVTGASRGIGQAIALELGRLGAVVIGTA 58
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 43
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 43
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 43
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 12 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 43
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTA 40
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 3 RWIGRIVLVTGACSSLGETLCKELALSGLTV 33
++ G+ VL+TGA +G + K LA GL V
Sbjct: 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKV 56
>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|B Chain B, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|C Chain C, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|D Chain D, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|E Chain E, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
pdb|1ZBQ|F Chain F, Crystal Structure Of Human 17-beta-hydroxysteroid
Dehydrogenase Type 4 In Complex With Nad
Length = 327
Score = 27.3 bits (59), Expect = 2.0, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
R+ GR+VLVTGA + LG A G VV
Sbjct: 27 RFDGRVVLVTGAGAGLGRAYALAFAERGALVV 58
>pdb|3TFO|A Chain A, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|B Chain B, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|C Chain C, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
pdb|3TFO|D Chain D, Crystal Structure Of A Putative
3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From
Sinorhizobium Meliloti
Length = 264
Score = 27.3 bits (59), Expect = 2.1, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 20/28 (71%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
+++L+TGA +GE + +EL ++G ++
Sbjct: 5 KVILITGASGGIGEGIARELGVAGAKIL 32
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGL 36
G++ +VTGA +G T+ + A G TVV +
Sbjct: 213 GKVAVVTGAARGIGATIAEVFARDGATVVAI 243
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
Length = 247
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLA 37
++ LVTGA +G + LA G TVVG A
Sbjct: 6 KVALVTGASRGIGFEVAHALASKGATVVGTA 36
>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|B Chain B, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|C Chain C, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
pdb|1GZ6|D Chain D, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat
Peroxisomal Multifunctional Enzyme Type 2
Length = 319
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 17/32 (53%)
Query: 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
R+ GR+VLVTGA LG A G VV
Sbjct: 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVV 37
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGL 36
GR LVTGA LGE + + L G +VGL
Sbjct: 10 GRKALVTGATGGLGEAIARALHAQG-AIVGL 39
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGL 36
GR LVTGA LGE + + L G +VGL
Sbjct: 7 GRKALVTGATGGLGEAIARALHAQG-AIVGL 36
>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
pdb|4HP8|B Chain B, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate
3-Dehydrogenase From Agrobacterium Tumefaciens (Target
Efi-506435) With Bound Nadp
Length = 247
Score = 26.9 bits (58), Expect = 3.0, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
GR LVTGA + LG+ + LA +G VV
Sbjct: 9 GRKALVTGANTGLGQAIAVGLAAAGAEVV 37
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg
3-oxoacyl-(acyl-carrier Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg
3-oxoacyl-(acyl-carrier Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTG+ +G + ++LA +G TV+
Sbjct: 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVI 35
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 26.9 bits (58), Expect = 3.1, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA +G + +LA G VV
Sbjct: 4 GKVALVTGASRGIGRAIAIDLAKQGANVV 32
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 5 IGRIVLVTGACSSLGETLCKELALSGLTV 33
+ R VLVTGA +G + ++LA G +
Sbjct: 25 MSRSVLVTGASKGIGRAIARQLAADGFNI 53
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTV 33
G++ LVTGA +G + K LA G V
Sbjct: 7 GKVALVTGASRGIGRAIAKRLANDGALV 34
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
R +VTG +G +CK+L+ +G+ VV
Sbjct: 13 RCAVVTGGNKGIGFEICKQLSSNGIMVV 40
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 1 MDRWIGR-IVLVTGACSSLGETLCKELALSGLTVVGLA 37
MD+ + + + +VTGA +G + ELA G V+G A
Sbjct: 22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTA 59
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
D + G+ VLVTG S +G + + A G VV L
Sbjct: 7 DIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALG 42
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin
Dehydrogenase Type1, Complexed With Nad+
Length = 267
Score = 26.2 bits (56), Expect = 5.5, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTV 33
G++ LVTGA +G + L L G V
Sbjct: 7 GKVALVTGAAQGIGRAFAEALLLKGAKV 34
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 25.8 bits (55), Expect = 5.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
M+R G++ +TGA G T LA G +V +
Sbjct: 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAI 76
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate
5-Dehydrogenase From Streptococcus Suis Type 2
Length = 291
Score = 25.8 bits (55), Expect = 6.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G+I LVTGA +G + A +G T+V
Sbjct: 34 GKIALVTGASYGIGFAIASAYAKAGATIV 62
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 25.8 bits (55), Expect = 7.2, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTV 33
RI LVTGA +G + ELA +G V
Sbjct: 29 RIALVTGASRGIGRAIALELAAAGAKV 55
>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
pdb|2A4K|B Chain B, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus
Thermophilus Tt0137
Length = 263
Score = 25.4 bits (54), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M R G+ +LVTGA S +G A G ++V
Sbjct: 1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLV 34
>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An
Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution
Length = 252
Score = 25.4 bits (54), Expect = 8.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLA 37
RI+LVTGA +G A G TV+ L
Sbjct: 13 RIILVTGASDGIGREAAXTYARYGATVILLG 43
>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
pdb|3E9Q|B Chain B, Crystal Structure Of The Short Chain Dehydrogenase From
Shigella Flexneri
Length = 273
Score = 25.4 bits (54), Expect = 8.8, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLA 37
RI+LVTGA +G A G TV+ L
Sbjct: 34 RIILVTGASDGIGREAAXTYARYGATVILLG 64
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 25.4 bits (54), Expect = 9.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVG 35
RI VTG +G ++C+ L G VV
Sbjct: 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVA 42
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 25.0 bits (53), Expect = 9.8, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGL 36
G++ +VTGA +G T+ + A G VV +
Sbjct: 234 GKVAIVTGAARGIGATIAEVFARDGAHVVAI 264
>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|B Chain B, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|C Chain C, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
pdb|1YXM|D Chain D, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa
Reductase
Length = 303
Score = 25.0 bits (53), Expect = 9.8, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ +VTG + +G+ + KEL G VV
Sbjct: 18 GQVAIVTGGATGIGKAIVKELLELGSNVV 46
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,430,620
Number of Sequences: 62578
Number of extensions: 29432
Number of successful extensions: 222
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152
Number of HSP's gapped (non-prelim): 70
length of query: 62
length of database: 14,973,337
effective HSP length: 33
effective length of query: 29
effective length of database: 12,908,263
effective search space: 374339627
effective search space used: 374339627
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 45 (21.9 bits)