Query psy6647
Match_columns 62
No_of_seqs 168 out of 2168
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 23:32:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6647.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6647hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0300 DltE Short-chain dehyd 99.6 3.8E-15 8.2E-20 79.6 6.2 53 1-53 1-53 (265)
2 COG4221 Short-chain alcohol de 99.6 1.8E-14 4E-19 75.9 6.7 52 1-52 1-52 (246)
3 PRK07478 short chain dehydroge 99.5 2E-13 4.2E-18 71.9 6.3 50 1-50 1-50 (254)
4 PRK05876 short chain dehydroge 99.5 2.8E-13 6.1E-18 72.4 6.3 50 1-50 1-50 (275)
5 PRK06194 hypothetical protein; 99.4 6.5E-13 1.4E-17 71.0 6.3 49 1-49 1-49 (287)
6 PRK05867 short chain dehydroge 99.4 7E-13 1.5E-17 69.9 6.0 49 2-50 5-53 (253)
7 PRK05854 short chain dehydroge 99.4 6E-13 1.3E-17 72.3 5.9 50 1-50 9-58 (313)
8 PRK06139 short chain dehydroge 99.4 6.3E-13 1.4E-17 72.9 5.9 50 1-50 2-51 (330)
9 PRK08589 short chain dehydroge 99.4 8.1E-13 1.8E-17 70.4 6.2 49 1-50 1-49 (272)
10 PRK07453 protochlorophyllide o 99.4 1.3E-12 2.8E-17 71.1 6.9 50 1-50 1-50 (322)
11 PRK08265 short chain dehydroge 99.4 1.5E-12 3.3E-17 69.0 6.8 50 1-50 1-50 (261)
12 PRK07063 short chain dehydroge 99.4 1.3E-12 2.8E-17 69.0 6.3 49 2-50 3-51 (260)
13 PRK07523 gluconate 5-dehydroge 99.4 1.9E-12 4.1E-17 68.2 6.2 48 3-50 7-54 (255)
14 KOG1205|consensus 99.4 4E-13 8.8E-18 72.4 3.4 51 1-51 7-57 (282)
15 PRK07035 short chain dehydroge 99.4 2.2E-12 4.8E-17 67.9 6.2 48 2-49 4-51 (252)
16 PRK08862 short chain dehydroge 99.4 2E-12 4.4E-17 67.7 5.9 48 3-50 2-49 (227)
17 PRK08303 short chain dehydroge 99.4 1.9E-12 4.1E-17 70.3 5.8 40 1-40 3-42 (305)
18 PRK08339 short chain dehydroge 99.4 2.3E-12 4.9E-17 68.5 6.0 48 3-50 5-52 (263)
19 PRK13394 3-hydroxybutyrate deh 99.4 3E-12 6.5E-17 67.5 6.3 50 1-50 2-51 (262)
20 PRK07576 short chain dehydroge 99.4 2.4E-12 5.3E-17 68.4 6.0 47 1-47 4-50 (264)
21 PRK07109 short chain dehydroge 99.4 2.6E-12 5.6E-17 70.5 6.2 49 2-50 4-52 (334)
22 KOG0725|consensus 99.4 3.1E-12 6.6E-17 68.8 6.2 49 2-50 4-52 (270)
23 PRK08085 gluconate 5-dehydroge 99.4 3.3E-12 7.1E-17 67.3 6.1 48 3-50 6-53 (254)
24 PRK07791 short chain dehydroge 99.4 4.1E-12 8.9E-17 68.3 6.1 40 1-40 1-40 (286)
25 PRK06197 short chain dehydroge 99.4 3.4E-12 7.4E-17 69.0 5.8 47 1-47 11-57 (306)
26 PRK07774 short chain dehydroge 99.4 4.8E-12 1E-16 66.4 6.2 48 1-48 1-48 (250)
27 PRK07825 short chain dehydroge 99.3 6.1E-12 1.3E-16 66.9 6.6 48 3-50 2-49 (273)
28 PRK07067 sorbitol dehydrogenas 99.3 6.5E-12 1.4E-16 66.3 6.6 50 1-50 1-50 (257)
29 PRK06200 2,3-dihydroxy-2,3-dih 99.3 5.9E-12 1.3E-16 66.7 6.4 50 1-50 1-50 (263)
30 COG3967 DltE Short-chain dehyd 99.3 5.5E-12 1.2E-16 65.7 6.0 50 3-52 2-51 (245)
31 PRK06172 short chain dehydroge 99.3 5.3E-12 1.1E-16 66.5 6.0 47 3-49 4-50 (253)
32 PRK05866 short chain dehydroge 99.3 5.4E-12 1.2E-16 68.1 6.2 48 3-50 37-84 (293)
33 KOG1014|consensus 99.3 2.2E-12 4.8E-17 70.0 4.5 48 6-53 49-96 (312)
34 PRK07890 short chain dehydroge 99.3 5.4E-12 1.2E-16 66.5 5.9 47 4-50 3-49 (258)
35 PRK12939 short chain dehydroge 99.3 8.2E-12 1.8E-16 65.4 6.3 49 1-49 2-50 (250)
36 PRK08277 D-mannonate oxidoredu 99.3 6.8E-12 1.5E-16 66.9 6.0 48 3-50 7-54 (278)
37 PRK07062 short chain dehydroge 99.3 6.5E-12 1.4E-16 66.5 5.8 48 3-50 5-52 (265)
38 PRK07666 fabG 3-ketoacyl-(acyl 99.3 8.9E-12 1.9E-16 65.1 6.2 48 1-48 2-49 (239)
39 PRK06057 short chain dehydroge 99.3 1.2E-11 2.6E-16 65.3 6.7 48 3-50 4-51 (255)
40 PRK12826 3-ketoacyl-(acyl-carr 99.3 1E-11 2.3E-16 65.0 6.1 47 1-47 1-47 (251)
41 TIGR03325 BphB_TodD cis-2,3-di 99.3 1.7E-11 3.7E-16 65.0 6.9 46 3-48 2-47 (262)
42 PRK06114 short chain dehydroge 99.3 1E-11 2.2E-16 65.6 6.0 41 1-41 3-43 (254)
43 PRK06124 gluconate 5-dehydroge 99.3 1.2E-11 2.5E-16 65.3 6.1 48 3-50 8-55 (256)
44 PLN02780 ketoreductase/ oxidor 99.3 5.9E-12 1.3E-16 68.8 5.0 46 5-50 52-97 (320)
45 PRK07984 enoyl-(acyl carrier p 99.3 1.2E-11 2.7E-16 65.9 6.1 40 1-40 1-42 (262)
46 PRK08703 short chain dehydroge 99.3 1.2E-11 2.6E-16 64.7 5.8 48 1-48 1-48 (239)
47 PRK07326 short chain dehydroge 99.3 1.8E-11 3.9E-16 63.8 6.4 50 1-50 1-50 (237)
48 PRK08278 short chain dehydroge 99.3 1.1E-11 2.5E-16 66.1 5.6 41 1-41 1-41 (273)
49 PRK05872 short chain dehydroge 99.3 1.7E-11 3.7E-16 66.2 6.3 48 3-50 6-53 (296)
50 PRK12742 oxidoreductase; Provi 99.3 2.4E-11 5.1E-16 63.4 6.6 46 1-46 1-47 (237)
51 PRK07814 short chain dehydroge 99.3 1.8E-11 3.9E-16 65.0 6.0 46 4-49 8-53 (263)
52 PRK06720 hypothetical protein; 99.3 2.4E-11 5.2E-16 61.6 6.1 47 4-50 14-60 (169)
53 PRK09242 tropinone reductase; 99.3 2E-11 4.4E-16 64.4 6.1 48 2-49 5-52 (257)
54 PRK06196 oxidoreductase; Provi 99.3 2.3E-11 5E-16 66.1 6.3 46 4-49 24-69 (315)
55 PRK06935 2-deoxy-D-gluconate 3 99.3 1.8E-11 3.9E-16 64.7 5.8 37 3-39 12-48 (258)
56 PRK06500 short chain dehydroge 99.3 2.6E-11 5.7E-16 63.5 6.1 49 1-49 1-49 (249)
57 KOG1208|consensus 99.3 1.9E-11 4.2E-16 66.9 5.7 50 3-52 32-81 (314)
58 PRK07024 short chain dehydroge 99.3 4.2E-11 9.2E-16 63.3 6.8 45 6-50 2-46 (257)
59 PRK09072 short chain dehydroge 99.3 3.5E-11 7.7E-16 63.7 6.5 47 3-49 2-48 (263)
60 PRK08213 gluconate 5-dehydroge 99.3 2.8E-11 6.1E-16 63.9 6.1 46 3-48 9-54 (259)
61 PLN02253 xanthoxin dehydrogena 99.3 3.8E-11 8.2E-16 64.1 6.6 48 3-50 15-62 (280)
62 KOG1201|consensus 99.3 1.4E-11 3E-16 66.7 4.9 50 3-52 35-84 (300)
63 PRK12429 3-hydroxybutyrate deh 99.3 2.6E-11 5.7E-16 63.7 5.9 46 4-49 2-47 (258)
64 PRK07060 short chain dehydroge 99.3 4.4E-11 9.6E-16 62.5 6.6 47 3-49 6-52 (245)
65 PRK08226 short chain dehydroge 99.3 2.8E-11 6E-16 64.0 5.8 41 1-41 1-41 (263)
66 PRK07806 short chain dehydroge 99.3 3.6E-11 7.8E-16 63.1 6.1 40 1-40 1-40 (248)
67 PRK12828 short chain dehydroge 99.3 4.6E-11 1E-15 62.1 6.5 44 2-45 3-46 (239)
68 PRK12481 2-deoxy-D-gluconate 3 99.3 2.3E-11 5E-16 64.3 5.4 39 2-40 4-42 (251)
69 PRK08643 acetoin reductase; Va 99.2 3.5E-11 7.7E-16 63.4 6.0 44 6-49 2-45 (256)
70 PRK06138 short chain dehydroge 99.2 4.2E-11 9.1E-16 62.9 6.2 47 3-49 2-48 (252)
71 PRK07231 fabG 3-ketoacyl-(acyl 99.2 5.1E-11 1.1E-15 62.4 6.5 47 3-49 2-48 (251)
72 PRK07097 gluconate 5-dehydroge 99.2 3.5E-11 7.6E-16 63.9 5.9 48 3-50 7-54 (265)
73 TIGR01289 LPOR light-dependent 99.2 5.2E-11 1.1E-15 64.8 6.6 46 5-50 2-48 (314)
74 PRK05717 oxidoreductase; Valid 99.2 5.5E-11 1.2E-15 62.8 6.5 46 3-48 7-52 (255)
75 PRK07454 short chain dehydroge 99.2 5.2E-11 1.1E-15 62.3 6.2 48 1-48 1-48 (241)
76 PRK05653 fabG 3-ketoacyl-(acyl 99.2 5E-11 1.1E-15 62.1 6.1 46 3-48 2-47 (246)
77 PRK08416 7-alpha-hydroxysteroi 99.2 4.1E-11 8.8E-16 63.5 5.7 46 2-47 4-50 (260)
78 PRK08628 short chain dehydroge 99.2 3.7E-11 8E-16 63.4 5.5 41 3-43 4-44 (258)
79 PRK06398 aldose dehydrogenase; 99.2 4.1E-11 8.8E-16 63.6 5.7 41 1-41 1-41 (258)
80 PRK06949 short chain dehydroge 99.2 5.3E-11 1.1E-15 62.7 5.8 47 3-49 6-52 (258)
81 PRK07889 enoyl-(acyl carrier p 99.2 7.4E-11 1.6E-15 62.6 6.3 50 1-50 2-55 (256)
82 PRK06125 short chain dehydroge 99.2 6.8E-11 1.5E-15 62.5 6.1 48 3-50 4-51 (259)
83 PRK08217 fabG 3-ketoacyl-(acyl 99.2 7.1E-11 1.5E-15 61.9 6.1 47 3-49 2-48 (253)
84 PRK06198 short chain dehydroge 99.2 6.1E-11 1.3E-15 62.6 5.8 47 1-47 1-48 (260)
85 PRK07856 short chain dehydroge 99.2 6.6E-11 1.4E-15 62.4 5.9 42 1-42 1-42 (252)
86 PRK08690 enoyl-(acyl carrier p 99.2 6.6E-11 1.4E-15 62.9 6.0 40 1-40 1-42 (261)
87 PRK07370 enoyl-(acyl carrier p 99.2 6.4E-11 1.4E-15 62.9 5.8 39 1-39 1-41 (258)
88 PRK06483 dihydromonapterin red 99.2 9.7E-11 2.1E-15 61.2 6.4 38 6-43 2-39 (236)
89 PRK07677 short chain dehydroge 99.2 6.2E-11 1.3E-15 62.5 5.6 44 6-49 1-44 (252)
90 PRK12936 3-ketoacyl-(acyl-carr 99.2 1.2E-10 2.5E-15 60.9 6.6 47 1-47 1-47 (245)
91 PRK06113 7-alpha-hydroxysteroi 99.2 7.8E-11 1.7E-15 62.2 5.9 45 4-48 9-53 (255)
92 PRK12746 short chain dehydroge 99.2 8.4E-11 1.8E-15 61.9 6.0 47 1-47 1-48 (254)
93 PRK08264 short chain dehydroge 99.2 1.5E-10 3.3E-15 60.4 6.7 44 1-44 1-45 (238)
94 PRK12823 benD 1,6-dihydroxycyc 99.2 8.4E-11 1.8E-15 62.1 5.8 38 3-40 5-42 (260)
95 PRK06128 oxidoreductase; Provi 99.2 9.4E-11 2E-15 63.4 6.0 38 3-40 52-89 (300)
96 PRK07904 short chain dehydroge 99.2 7.2E-11 1.6E-15 62.6 5.4 46 5-50 7-54 (253)
97 PRK07792 fabG 3-ketoacyl-(acyl 99.2 9.9E-11 2.2E-15 63.5 6.0 48 3-50 9-57 (306)
98 PRK06079 enoyl-(acyl carrier p 99.2 1.4E-10 3.1E-15 61.4 6.3 38 3-40 4-43 (252)
99 PRK08594 enoyl-(acyl carrier p 99.2 1.5E-10 3.2E-15 61.5 6.4 50 1-50 2-56 (257)
100 PRK09186 flagellin modificatio 99.2 1E-10 2.3E-15 61.5 5.6 46 4-49 2-47 (256)
101 TIGR03206 benzo_BadH 2-hydroxy 99.2 1.1E-10 2.4E-15 61.2 5.7 44 4-47 1-44 (250)
102 PRK06182 short chain dehydroge 99.2 2.2E-10 4.9E-15 61.0 6.8 43 5-47 2-44 (273)
103 PRK05993 short chain dehydroge 99.2 2.2E-10 4.8E-15 61.3 6.8 43 5-47 3-45 (277)
104 PRK12935 acetoacetyl-CoA reduc 99.2 1.7E-10 3.7E-15 60.5 6.2 47 1-47 1-48 (247)
105 PRK07201 short chain dehydroge 99.2 1.1E-10 2.4E-15 68.2 5.9 48 3-50 368-415 (657)
106 PRK08251 short chain dehydroge 99.2 1.7E-10 3.7E-15 60.6 6.0 43 6-48 2-44 (248)
107 PLN02730 enoyl-[acyl-carrier-p 99.2 1.3E-10 2.8E-15 63.4 5.6 44 3-47 6-51 (303)
108 PRK08340 glucose-1-dehydrogena 99.2 1.6E-10 3.4E-15 61.2 5.7 43 8-50 2-44 (259)
109 PRK08415 enoyl-(acyl carrier p 99.2 2.9E-10 6.2E-15 61.0 6.7 38 3-40 2-41 (274)
110 PRK07985 oxidoreductase; Provi 99.2 1.6E-10 3.5E-15 62.4 5.8 37 3-39 46-82 (294)
111 PRK05884 short chain dehydroge 99.2 2.2E-10 4.8E-15 59.8 6.1 43 8-50 2-44 (223)
112 PRK12747 short chain dehydroge 99.2 1.6E-10 3.5E-15 60.9 5.6 44 4-47 2-46 (252)
113 TIGR01832 kduD 2-deoxy-D-gluco 99.2 1.7E-10 3.6E-15 60.6 5.6 38 3-40 2-39 (248)
114 PF00106 adh_short: short chai 99.2 1.1E-10 2.4E-15 58.1 4.7 45 7-51 1-48 (167)
115 PRK05565 fabG 3-ketoacyl-(acyl 99.2 2.1E-10 4.6E-15 59.9 5.9 46 3-48 2-48 (247)
116 PRK12829 short chain dehydroge 99.2 2.2E-10 4.7E-15 60.5 6.0 46 2-47 7-52 (264)
117 PRK12367 short chain dehydroge 99.2 2.5E-10 5.3E-15 60.6 6.2 37 4-40 12-48 (245)
118 PRK08063 enoyl-(acyl carrier p 99.1 1.8E-10 3.9E-15 60.5 5.5 45 4-48 2-47 (250)
119 PRK06701 short chain dehydroge 99.1 2.6E-10 5.7E-15 61.5 6.1 38 3-40 43-80 (290)
120 PRK07533 enoyl-(acyl carrier p 99.1 3.2E-10 7E-15 60.2 6.3 39 3-41 7-47 (258)
121 PRK06101 short chain dehydroge 99.1 3.6E-10 7.7E-15 59.4 6.4 42 7-48 2-43 (240)
122 PRK09291 short chain dehydroge 99.1 2.7E-10 5.7E-15 60.0 5.9 41 6-46 2-42 (257)
123 PRK06841 short chain dehydroge 99.1 3.8E-10 8.2E-15 59.4 6.4 41 2-42 11-51 (255)
124 PRK06914 short chain dehydroge 99.1 3.2E-10 6.9E-15 60.5 6.2 43 5-47 2-44 (280)
125 PRK05855 short chain dehydroge 99.1 2.6E-10 5.7E-15 65.4 6.1 47 4-50 313-359 (582)
126 PRK06484 short chain dehydroge 99.1 3.6E-10 7.9E-15 64.6 6.5 47 4-50 3-49 (520)
127 PRK05786 fabG 3-ketoacyl-(acyl 99.1 4.3E-10 9.3E-15 58.7 6.3 44 3-46 2-45 (238)
128 PRK12859 3-ketoacyl-(acyl-carr 99.1 3.9E-10 8.4E-15 59.7 6.1 38 1-38 1-40 (256)
129 PRK08936 glucose-1-dehydrogena 99.1 3.4E-10 7.4E-15 59.9 5.9 38 3-40 4-41 (261)
130 PRK05650 short chain dehydroge 99.1 2.7E-10 5.9E-15 60.6 5.6 43 7-49 1-43 (270)
131 PRK08267 short chain dehydroge 99.1 3.8E-10 8.3E-15 59.7 6.1 44 7-50 2-45 (260)
132 PRK07775 short chain dehydroge 99.1 4.8E-10 1E-14 59.9 6.5 44 4-47 8-51 (274)
133 KOG1200|consensus 99.1 3E-10 6.5E-15 59.1 5.4 49 4-52 12-60 (256)
134 PRK06463 fabG 3-ketoacyl-(acyl 99.1 6.9E-10 1.5E-14 58.6 6.8 38 3-40 4-41 (255)
135 PRK12384 sorbitol-6-phosphate 99.1 3.6E-10 7.8E-15 59.7 5.7 43 6-48 2-44 (259)
136 PRK12827 short chain dehydroge 99.1 3.8E-10 8.3E-15 59.0 5.7 38 1-38 1-38 (249)
137 PRK07102 short chain dehydroge 99.1 3.6E-10 7.8E-15 59.3 5.6 42 7-48 2-43 (243)
138 PRK06505 enoyl-(acyl carrier p 99.1 4.1E-10 8.9E-15 60.3 5.9 38 4-41 5-44 (271)
139 PRK05599 hypothetical protein; 99.1 3.2E-10 6.9E-15 59.9 5.3 43 7-50 1-43 (246)
140 PRK12937 short chain dehydroge 99.1 5.3E-10 1.1E-14 58.5 5.9 38 3-40 2-39 (245)
141 PRK08945 putative oxoacyl-(acy 99.1 3.2E-10 6.9E-15 59.6 5.1 46 4-49 10-55 (247)
142 PRK06484 short chain dehydroge 99.1 4.8E-10 1E-14 64.2 6.2 46 5-50 268-313 (520)
143 PRK12743 oxidoreductase; Provi 99.1 4E-10 8.7E-15 59.6 5.5 42 6-47 2-44 (256)
144 PRK06603 enoyl-(acyl carrier p 99.1 4.6E-10 1E-14 59.7 5.7 37 4-40 6-44 (260)
145 KOG1502|consensus 99.1 7.2E-10 1.6E-14 61.0 6.5 44 1-44 1-44 (327)
146 PRK06180 short chain dehydroge 99.1 6.4E-10 1.4E-14 59.5 6.2 44 5-48 3-46 (277)
147 PRK05875 short chain dehydroge 99.1 4.9E-10 1.1E-14 59.7 5.7 45 3-47 4-48 (276)
148 PRK07831 short chain dehydroge 99.1 5.5E-10 1.2E-14 59.2 5.8 45 4-48 15-60 (262)
149 PRK06077 fabG 3-ketoacyl-(acyl 99.1 7E-10 1.5E-14 58.2 6.1 39 1-39 1-39 (252)
150 PRK09134 short chain dehydroge 99.1 7.2E-10 1.6E-14 58.6 6.1 43 3-45 6-49 (258)
151 PRK06181 short chain dehydroge 99.1 5.9E-10 1.3E-14 59.0 5.7 43 6-48 1-43 (263)
152 PRK08263 short chain dehydroge 99.1 8E-10 1.7E-14 59.0 6.3 44 5-48 2-45 (275)
153 TIGR01963 PHB_DH 3-hydroxybuty 99.1 5.1E-10 1.1E-14 58.8 5.4 43 6-48 1-43 (255)
154 PRK08159 enoyl-(acyl carrier p 99.1 1E-09 2.3E-14 58.8 6.4 37 4-40 8-46 (272)
155 PRK08177 short chain dehydroge 99.1 8.4E-10 1.8E-14 57.5 5.9 39 7-45 2-40 (225)
156 PRK07074 short chain dehydroge 99.1 1.1E-09 2.4E-14 57.8 6.4 44 6-49 2-45 (257)
157 PRK08642 fabG 3-ketoacyl-(acyl 99.1 1.2E-09 2.6E-14 57.4 6.5 45 3-47 2-47 (253)
158 PRK09135 pteridine reductase; 99.1 1.2E-09 2.5E-14 57.2 6.3 40 1-40 1-40 (249)
159 PRK06997 enoyl-(acyl carrier p 99.1 8.8E-10 1.9E-14 58.7 5.9 39 1-39 1-41 (260)
160 PRK06940 short chain dehydroge 99.1 6.9E-10 1.5E-14 59.5 5.5 43 6-50 2-44 (275)
161 PRK06523 short chain dehydroge 99.0 9.6E-10 2.1E-14 58.1 5.8 39 3-41 6-44 (260)
162 PRK06171 sorbitol-6-phosphate 99.0 6.6E-10 1.4E-14 58.9 5.2 40 3-42 6-45 (266)
163 PRK05693 short chain dehydroge 99.0 1.5E-09 3.3E-14 57.9 6.5 40 7-46 2-41 (274)
164 PRK10538 malonic semialdehyde 99.0 1.3E-09 2.8E-14 57.5 6.1 42 7-48 1-42 (248)
165 PRK12825 fabG 3-ketoacyl-(acyl 99.0 1.2E-09 2.6E-14 57.0 5.9 40 1-40 1-40 (249)
166 PRK12744 short chain dehydroge 99.0 1.2E-09 2.5E-14 57.8 5.8 36 3-38 5-40 (257)
167 PRK06482 short chain dehydroge 99.0 2E-09 4.2E-14 57.5 6.6 43 6-48 2-44 (276)
168 PRK05557 fabG 3-ketoacyl-(acyl 99.0 1.5E-09 3.3E-14 56.6 6.0 39 3-41 2-40 (248)
169 TIGR02415 23BDH acetoin reduct 99.0 1.2E-09 2.6E-14 57.5 5.6 42 7-48 1-42 (254)
170 TIGR01500 sepiapter_red sepiap 99.0 1.1E-09 2.3E-14 58.0 5.3 43 8-50 2-48 (256)
171 PRK12745 3-ketoacyl-(acyl-carr 99.0 1.4E-09 3.1E-14 57.2 5.7 35 6-40 2-36 (256)
172 PRK12938 acetyacetyl-CoA reduc 99.0 1.4E-09 3E-14 57.1 5.5 34 4-37 1-34 (246)
173 PRK06550 fabG 3-ketoacyl-(acyl 99.0 1.5E-09 3.2E-14 56.7 5.3 39 3-41 2-40 (235)
174 PRK06924 short chain dehydroge 99.0 3E-09 6.6E-14 55.9 6.4 40 7-46 2-42 (251)
175 PRK08993 2-deoxy-D-gluconate 3 99.0 1.8E-09 4E-14 57.1 5.5 38 3-40 7-44 (253)
176 PRK06179 short chain dehydroge 99.0 2.1E-09 4.6E-14 57.1 5.7 39 5-43 3-41 (270)
177 PRK07832 short chain dehydroge 99.0 1.5E-09 3.3E-14 57.9 5.1 43 7-49 1-43 (272)
178 PRK12748 3-ketoacyl-(acyl-carr 99.0 2.7E-09 5.8E-14 56.4 5.8 37 3-39 2-40 (256)
179 PRK08017 oxidoreductase; Provi 99.0 5.4E-09 1.2E-13 55.1 6.7 40 7-46 3-42 (256)
180 PLN03209 translocon at the inn 99.0 3.3E-09 7E-14 62.0 6.2 45 4-48 78-122 (576)
181 PLN00015 protochlorophyllide r 99.0 2E-09 4.3E-14 58.5 5.1 41 10-50 1-42 (308)
182 PRK08324 short chain dehydroge 99.0 3.3E-09 7.2E-14 62.8 6.3 46 4-49 420-465 (681)
183 PRK07424 bifunctional sterol d 99.0 3.8E-09 8.1E-14 59.7 6.2 41 4-44 176-216 (406)
184 TIGR02632 RhaD_aldol-ADH rhamn 99.0 2.4E-09 5.1E-14 63.5 5.7 45 4-48 412-456 (676)
185 PRK06947 glucose-1-dehydrogena 99.0 3.2E-09 7E-14 55.7 5.7 41 6-46 2-43 (248)
186 PRK06300 enoyl-(acyl carrier p 99.0 4.4E-09 9.6E-14 57.4 6.3 37 3-39 5-43 (299)
187 TIGR01829 AcAcCoA_reduct aceto 99.0 3.1E-09 6.8E-14 55.5 5.4 38 7-44 1-39 (242)
188 PRK06123 short chain dehydroge 98.9 3.2E-09 7E-14 55.7 5.4 39 6-44 2-41 (248)
189 TIGR02622 CDP_4_6_dhtase CDP-g 98.9 3.3E-09 7.1E-14 58.4 5.1 39 4-42 2-40 (349)
190 PLN02583 cinnamoyl-CoA reducta 98.9 9.9E-09 2.1E-13 55.6 6.8 37 4-40 4-40 (297)
191 PRK08261 fabG 3-ketoacyl-(acyl 98.9 8.1E-09 1.8E-13 58.5 6.7 36 4-39 208-243 (450)
192 KOG1209|consensus 98.9 5.4E-09 1.2E-13 55.2 5.3 45 5-49 6-51 (289)
193 PRK07023 short chain dehydroge 98.9 7.4E-09 1.6E-13 54.3 5.9 34 8-41 3-36 (243)
194 PRK06953 short chain dehydroge 98.9 9.6E-09 2.1E-13 53.4 6.3 40 7-46 2-41 (222)
195 PRK08220 2,3-dihydroxybenzoate 98.9 7.4E-09 1.6E-13 54.4 5.7 38 3-40 5-42 (252)
196 COG1028 FabG Dehydrogenases wi 98.9 7.1E-09 1.5E-13 54.5 5.6 39 3-41 2-40 (251)
197 PRK07577 short chain dehydroge 98.9 6.7E-09 1.5E-13 54.1 5.3 37 5-41 2-38 (234)
198 PRK08219 short chain dehydroge 98.9 9.9E-09 2.1E-13 53.2 5.8 40 6-46 3-42 (227)
199 PLN02989 cinnamyl-alcohol dehy 98.9 8E-09 1.7E-13 56.2 5.7 38 5-42 4-41 (325)
200 PRK12824 acetoacetyl-CoA reduc 98.9 1.6E-08 3.6E-13 52.9 6.5 35 6-40 2-36 (245)
201 PLN02896 cinnamyl-alcohol dehy 98.9 1.9E-08 4.1E-13 55.5 6.7 41 5-45 9-49 (353)
202 PRK09730 putative NAD(P)-bindi 98.9 8.2E-09 1.8E-13 54.0 5.1 40 7-46 2-42 (247)
203 PLN02653 GDP-mannose 4,6-dehyd 98.9 8.4E-09 1.8E-13 56.5 5.3 39 3-41 3-41 (340)
204 TIGR03589 PseB UDP-N-acetylglu 98.9 1.6E-08 3.4E-13 55.4 6.2 40 4-43 2-43 (324)
205 TIGR02685 pter_reduc_Leis pter 98.9 8E-09 1.7E-13 55.0 4.9 42 7-48 2-44 (267)
206 TIGR01831 fabG_rel 3-oxoacyl-( 98.8 8E-09 1.7E-13 54.0 4.6 40 9-48 1-41 (239)
207 PLN02686 cinnamoyl-CoA reducta 98.8 1.9E-08 4E-13 56.0 6.3 42 3-44 50-91 (367)
208 PRK07041 short chain dehydroge 98.8 1E-08 2.2E-13 53.4 4.6 39 10-48 1-39 (230)
209 PLN02986 cinnamyl-alcohol dehy 98.8 2.2E-08 4.7E-13 54.6 5.9 39 4-42 3-41 (322)
210 KOG1207|consensus 98.8 2.3E-08 5E-13 51.6 5.6 50 3-52 4-53 (245)
211 PRK07069 short chain dehydroge 98.8 1.3E-08 2.9E-13 53.4 4.7 40 9-48 2-42 (251)
212 PLN02662 cinnamyl-alcohol dehy 98.8 1.8E-08 3.8E-13 54.7 5.1 37 5-41 3-39 (322)
213 PLN00141 Tic62-NAD(P)-related 98.8 4.9E-08 1.1E-12 51.7 6.6 42 4-45 15-56 (251)
214 PLN00198 anthocyanidin reducta 98.8 2.6E-08 5.6E-13 54.6 5.7 38 4-41 7-44 (338)
215 PLN02572 UDP-sulfoquinovose sy 98.8 2E-08 4.3E-13 57.2 5.3 35 4-38 45-79 (442)
216 TIGR01472 gmd GDP-mannose 4,6- 98.8 2.3E-08 4.9E-13 55.0 5.1 34 7-40 1-34 (343)
217 PLN02650 dihydroflavonol-4-red 98.8 3E-08 6.4E-13 54.6 5.4 39 5-43 4-42 (351)
218 PRK12548 shikimate 5-dehydroge 98.7 5.7E-08 1.2E-12 52.9 6.0 47 3-50 123-173 (289)
219 KOG1210|consensus 98.7 4E-08 8.7E-13 54.0 5.3 47 7-53 34-80 (331)
220 PF13460 NAD_binding_10: NADH( 98.7 1.1E-07 2.3E-12 48.1 6.2 37 9-45 1-37 (183)
221 PLN02214 cinnamoyl-CoA reducta 98.7 6.6E-08 1.4E-12 53.4 5.8 39 4-42 8-46 (342)
222 PLN02240 UDP-glucose 4-epimera 98.7 6.7E-08 1.4E-12 53.1 5.7 37 3-39 2-38 (352)
223 cd01078 NAD_bind_H4MPT_DH NADP 98.7 8.3E-08 1.8E-12 49.4 5.7 48 3-50 25-72 (194)
224 TIGR01830 3oxo_ACP_reduc 3-oxo 98.7 4.1E-08 8.9E-13 51.1 4.5 32 9-40 1-32 (239)
225 PRK15181 Vi polysaccharide bio 98.7 6.2E-08 1.4E-12 53.5 5.3 37 4-40 13-49 (348)
226 KOG1478|consensus 98.7 4.5E-08 9.7E-13 52.9 4.2 47 5-51 2-53 (341)
227 KOG4169|consensus 98.7 6.4E-08 1.4E-12 51.4 4.5 42 3-44 2-43 (261)
228 CHL00194 ycf39 Ycf39; Provisio 98.6 1.5E-07 3.3E-12 51.4 5.8 36 8-43 2-37 (317)
229 PLN02427 UDP-apiose/xylose syn 98.6 1.7E-07 3.8E-12 52.3 5.9 40 4-43 12-52 (386)
230 COG1086 Predicted nucleoside-d 98.6 1E-07 2.2E-12 55.7 4.5 49 3-51 247-296 (588)
231 PRK11908 NAD-dependent epimera 98.6 4E-07 8.7E-12 50.2 6.5 37 7-43 2-39 (347)
232 PRK08309 short chain dehydroge 98.6 4.9E-07 1.1E-11 46.3 6.1 40 8-48 2-41 (177)
233 KOG1199|consensus 98.6 1.4E-07 3E-12 48.7 4.1 48 4-51 7-54 (260)
234 PLN02657 3,8-divinyl protochlo 98.6 2.8E-07 6.1E-12 51.9 5.7 38 5-42 59-96 (390)
235 PRK08125 bifunctional UDP-gluc 98.6 3.8E-07 8.3E-12 54.1 6.4 39 4-42 313-352 (660)
236 smart00822 PKS_KR This enzymat 98.5 2.1E-07 4.5E-12 46.2 4.2 35 7-41 1-36 (180)
237 PLN02206 UDP-glucuronate decar 98.5 3.2E-07 7E-12 52.4 5.2 35 5-39 118-152 (442)
238 TIGR03466 HpnA hopanoid-associ 98.5 2.3E-07 5E-12 50.3 4.4 35 8-42 2-36 (328)
239 PF13561 adh_short_C2: Enoyl-( 98.5 2.4E-07 5.2E-12 48.7 4.2 31 13-43 1-33 (241)
240 PLN02166 dTDP-glucose 4,6-dehy 98.5 4.3E-07 9.2E-12 51.9 5.4 34 6-39 120-153 (436)
241 PLN02695 GDP-D-mannose-3',5'-e 98.5 4.2E-07 9.2E-12 50.8 5.2 36 5-40 20-55 (370)
242 TIGR01777 yfcH conserved hypot 98.5 2.5E-07 5.4E-12 49.5 3.8 34 9-42 1-34 (292)
243 COG0451 WcaG Nucleoside-diphos 98.5 5E-07 1.1E-11 48.7 4.9 34 9-42 3-36 (314)
244 PF01488 Shikimate_DH: Shikima 98.5 8.2E-07 1.8E-11 43.6 5.2 47 3-50 9-56 (135)
245 PF02719 Polysacc_synt_2: Poly 98.5 5E-07 1.1E-11 49.5 4.8 42 9-50 1-43 (293)
246 KOG1611|consensus 98.5 5.9E-07 1.3E-11 47.7 4.7 39 5-43 2-42 (249)
247 PRK07578 short chain dehydroge 98.5 6E-07 1.3E-11 46.0 4.7 32 8-40 2-33 (199)
248 PLN02778 3,5-epimerase/4-reduc 98.4 6.1E-07 1.3E-11 48.9 4.8 33 6-38 9-41 (298)
249 COG0702 Predicted nucleoside-d 98.4 1.4E-06 3E-11 46.3 5.9 40 8-47 2-41 (275)
250 PF01370 Epimerase: NAD depend 98.4 1.4E-06 3.1E-11 45.3 5.7 34 9-42 1-34 (236)
251 PF08659 KR: KR domain; Inter 98.4 9E-07 2E-11 45.2 4.8 32 8-39 2-34 (181)
252 TIGR03649 ergot_EASG ergot alk 98.4 5.8E-07 1.3E-11 48.3 4.2 34 9-42 2-35 (285)
253 COG1087 GalE UDP-glucose 4-epi 98.4 1.3E-06 2.8E-11 48.2 5.4 33 7-39 1-33 (329)
254 PRK13656 trans-2-enoyl-CoA red 98.4 1.1E-06 2.3E-11 49.9 5.1 34 5-39 40-75 (398)
255 PRK10675 UDP-galactose-4-epime 98.4 1.1E-06 2.4E-11 48.1 5.2 32 8-39 2-33 (338)
256 TIGR02813 omega_3_PfaA polyket 98.4 1.1E-06 2.4E-11 58.3 5.7 35 5-39 1996-2031(2582)
257 PRK05579 bifunctional phosphop 98.4 1.2E-06 2.5E-11 49.8 5.1 38 3-40 185-238 (399)
258 KOG1610|consensus 98.4 1.9E-06 4.1E-11 47.6 5.6 47 4-50 27-73 (322)
259 PRK09009 C factor cell-cell si 98.4 1.3E-06 2.7E-11 45.7 4.8 34 7-40 1-36 (235)
260 PLN02520 bifunctional 3-dehydr 98.4 1.7E-06 3.7E-11 50.6 5.7 46 4-50 377-422 (529)
261 PRK14982 acyl-ACP reductase; P 98.4 1.7E-06 3.7E-11 48.3 5.5 48 3-50 152-201 (340)
262 KOG1429|consensus 98.4 1.5E-06 3.2E-11 47.8 5.0 36 4-39 25-60 (350)
263 PRK00258 aroE shikimate 5-dehy 98.4 2.7E-06 5.8E-11 46.1 5.8 46 4-50 121-167 (278)
264 PRK14106 murD UDP-N-acetylmura 98.3 1.7E-06 3.7E-11 49.2 5.1 37 3-40 2-38 (450)
265 PLN00016 RNA-binding protein; 98.3 1.7E-06 3.6E-11 48.4 4.6 38 5-42 51-92 (378)
266 PRK02472 murD UDP-N-acetylmura 98.3 1.7E-06 3.7E-11 49.2 4.0 37 3-40 2-38 (447)
267 TIGR01746 Thioester-redct thio 98.3 2E-06 4.3E-11 47.1 4.2 34 8-41 1-36 (367)
268 cd01075 NAD_bind_Leu_Phe_Val_D 98.3 7.2E-06 1.6E-10 42.7 6.0 46 3-49 25-70 (200)
269 COG1090 Predicted nucleoside-d 98.3 2E-06 4.4E-11 46.9 4.0 36 9-44 1-36 (297)
270 TIGR01214 rmlD dTDP-4-dehydror 98.3 2.5E-06 5.4E-11 45.8 4.3 31 9-39 2-32 (287)
271 PRK11150 rfaD ADP-L-glycero-D- 98.2 2.6E-06 5.5E-11 46.3 4.3 30 9-38 2-31 (308)
272 KOG1371|consensus 98.2 2.7E-06 5.8E-11 47.2 4.2 33 6-38 2-34 (343)
273 PF01073 3Beta_HSD: 3-beta hyd 98.2 2.4E-06 5.2E-11 46.4 4.0 32 10-41 1-34 (280)
274 TIGR01179 galE UDP-glucose-4-e 98.2 5.7E-06 1.2E-10 44.8 5.4 32 8-39 1-32 (328)
275 PRK09987 dTDP-4-dehydrorhamnos 98.2 3.2E-06 6.8E-11 46.0 4.3 31 8-39 2-32 (299)
276 PRK12320 hypothetical protein; 98.2 5.3E-06 1.2E-10 50.0 5.3 34 8-41 2-35 (699)
277 PRK10217 dTDP-glucose 4,6-dehy 98.2 4.3E-06 9.4E-11 46.2 4.7 33 7-39 2-35 (355)
278 PRK09620 hypothetical protein; 98.2 7.4E-06 1.6E-10 43.6 5.3 35 4-38 1-51 (229)
279 PLN02260 probable rhamnose bio 98.2 7.1E-06 1.5E-10 48.9 5.5 37 3-39 3-41 (668)
280 TIGR01181 dTDP_gluc_dehyt dTDP 98.2 9.2E-06 2E-10 43.8 5.2 31 8-38 1-33 (317)
281 TIGR00507 aroE shikimate 5-deh 98.1 1.3E-05 2.9E-10 43.3 5.6 45 5-50 116-160 (270)
282 COG0623 FabI Enoyl-[acyl-carri 98.1 2.2E-05 4.7E-10 42.1 5.7 50 1-50 1-55 (259)
283 PRK05865 hypothetical protein; 98.1 1.2E-05 2.5E-10 49.5 5.3 33 8-40 2-34 (854)
284 COG1748 LYS9 Saccharopine dehy 98.1 1.9E-05 4.1E-10 44.9 5.8 42 7-49 2-44 (389)
285 TIGR00521 coaBC_dfp phosphopan 98.1 1.3E-05 2.9E-10 45.5 5.0 37 3-39 182-234 (390)
286 PRK07201 short chain dehydroge 98.1 1.4E-05 3.1E-10 47.2 5.2 33 8-40 2-36 (657)
287 TIGR02197 heptose_epim ADP-L-g 98.1 9.1E-06 2E-10 44.0 3.9 32 9-40 1-33 (314)
288 cd01065 NAD_bind_Shikimate_DH 98.0 3.4E-05 7.4E-10 38.2 5.5 45 4-49 17-62 (155)
289 PRK10084 dTDP-glucose 4,6 dehy 98.0 1.3E-05 2.9E-10 44.2 4.3 31 8-38 2-33 (352)
290 PF05368 NmrA: NmrA-like famil 98.0 2.9E-05 6.3E-10 40.8 5.1 33 9-41 1-33 (233)
291 PRK09310 aroDE bifunctional 3- 97.9 5.3E-05 1.2E-09 44.0 5.9 45 4-49 330-374 (477)
292 COG0169 AroE Shikimate 5-dehyd 97.9 6.9E-05 1.5E-09 41.1 5.9 47 5-52 125-172 (283)
293 KOG1430|consensus 97.9 4.3E-05 9.3E-10 43.1 5.0 38 4-41 2-41 (361)
294 cd01080 NAD_bind_m-THF_DH_Cycl 97.9 0.00011 2.4E-09 37.6 6.1 47 3-49 41-87 (168)
295 PRK12549 shikimate 5-dehydroge 97.9 5.9E-05 1.3E-09 41.2 5.4 46 4-50 125-171 (284)
296 TIGR01809 Shik-DH-AROM shikima 97.8 0.00011 2.4E-09 40.1 5.7 46 4-50 123-169 (282)
297 PLN02996 fatty acyl-CoA reduct 97.8 6.5E-05 1.4E-09 43.8 5.0 37 4-40 9-48 (491)
298 PLN02503 fatty acyl-CoA reduct 97.8 6.3E-05 1.4E-09 44.9 4.9 36 4-39 117-155 (605)
299 TIGR01915 npdG NADPH-dependent 97.8 0.00016 3.5E-09 38.0 5.9 39 8-46 2-40 (219)
300 PRK14027 quinate/shikimate deh 97.8 0.00014 3E-09 39.8 5.4 46 4-50 125-171 (283)
301 TIGR02853 spore_dpaA dipicolin 97.8 0.00025 5.4E-09 38.9 6.2 41 3-44 148-188 (287)
302 cd08295 double_bond_reductase_ 97.7 0.00023 5E-09 39.2 6.1 43 5-47 151-193 (338)
303 PF07993 NAD_binding_4: Male s 97.7 0.00011 2.4E-09 39.1 4.7 30 11-40 1-32 (249)
304 PLN02725 GDP-4-keto-6-deoxyman 97.7 3.6E-05 7.7E-10 41.6 2.8 29 10-38 1-29 (306)
305 COG0569 TrkA K+ transport syst 97.7 0.00027 5.8E-09 37.6 6.0 37 8-45 2-38 (225)
306 PF04321 RmlD_sub_bind: RmlD s 97.7 5.6E-05 1.2E-09 41.2 3.5 34 7-40 1-34 (286)
307 PRK06849 hypothetical protein; 97.7 0.00025 5.5E-09 40.0 5.8 38 5-42 3-40 (389)
308 COG1088 RfbB dTDP-D-glucose 4, 97.7 0.00032 7E-09 39.1 6.0 32 7-38 1-34 (340)
309 cd05212 NAD_bind_m-THF_DH_Cycl 97.7 0.00041 8.9E-09 34.5 5.8 43 3-45 25-67 (140)
310 TIGR02825 B4_12hDH leukotriene 97.7 0.00034 7.3E-09 38.4 6.1 42 5-46 138-179 (325)
311 PRK14175 bifunctional 5,10-met 97.7 0.00044 9.4E-09 38.1 6.4 44 3-46 155-198 (286)
312 PF02882 THF_DHG_CYH_C: Tetrah 97.7 0.00037 7.9E-09 35.5 5.6 45 3-47 33-77 (160)
313 cd08293 PTGR2 Prostaglandin re 97.6 0.00039 8.5E-09 38.3 5.9 41 7-47 156-197 (345)
314 COG2910 Putative NADH-flavin r 97.6 0.00024 5.3E-09 37.1 4.6 38 8-45 2-39 (211)
315 PLN03154 putative allyl alcoho 97.6 0.00045 9.7E-09 38.5 5.9 42 5-46 158-199 (348)
316 PRK08655 prephenate dehydrogen 97.6 0.00041 8.9E-09 40.1 5.8 39 8-46 2-40 (437)
317 cd08294 leukotriene_B4_DH_like 97.6 0.00056 1.2E-08 37.3 6.1 42 5-46 143-184 (329)
318 PRK12550 shikimate 5-dehydroge 97.6 0.0004 8.6E-09 37.9 5.4 43 6-49 122-165 (272)
319 PRK14194 bifunctional 5,10-met 97.6 0.00047 1E-08 38.2 5.6 44 3-46 156-199 (301)
320 PRK14192 bifunctional 5,10-met 97.6 0.00069 1.5E-08 37.2 6.3 43 3-45 156-198 (283)
321 PF02826 2-Hacid_dh_C: D-isome 97.6 0.00075 1.6E-08 34.6 6.1 40 3-43 33-72 (178)
322 PF03807 F420_oxidored: NADP o 97.6 0.00053 1.2E-08 31.5 5.1 38 14-51 6-47 (96)
323 KOG1203|consensus 97.6 0.00041 8.8E-09 39.9 5.4 44 5-48 78-121 (411)
324 PF00670 AdoHcyase_NAD: S-aden 97.6 0.00076 1.6E-08 34.4 5.9 39 4-43 21-59 (162)
325 PF02737 3HCDH_N: 3-hydroxyacy 97.5 0.0003 6.4E-09 36.2 4.3 39 9-48 2-40 (180)
326 cd05276 p53_inducible_oxidored 97.5 0.00072 1.5E-08 36.3 6.0 41 5-45 139-179 (323)
327 PRK13940 glutamyl-tRNA reducta 97.5 0.00055 1.2E-08 39.4 5.7 47 3-50 178-225 (414)
328 cd08259 Zn_ADH5 Alcohol dehydr 97.5 0.00078 1.7E-08 36.6 6.1 41 5-45 162-202 (332)
329 TIGR01035 hemA glutamyl-tRNA r 97.5 0.00073 1.6E-08 38.8 6.1 47 3-50 177-224 (417)
330 PLN02260 probable rhamnose bio 97.5 0.00027 5.8E-09 42.4 4.5 29 6-34 380-408 (668)
331 cd08253 zeta_crystallin Zeta-c 97.5 0.00088 1.9E-08 36.1 6.1 41 5-45 144-184 (325)
332 PF12076 Wax2_C: WAX2 C-termin 97.5 0.00035 7.6E-09 35.5 4.1 40 9-50 1-40 (164)
333 PRK00066 ldh L-lactate dehydro 97.5 0.00062 1.3E-08 37.8 5.4 47 1-48 1-49 (315)
334 PF12242 Eno-Rase_NADH_b: NAD( 97.5 0.00051 1.1E-08 31.0 4.1 33 7-39 40-73 (78)
335 COG0604 Qor NADPH:quinone redu 97.5 0.00075 1.6E-08 37.6 5.6 39 6-44 143-181 (326)
336 PRK06732 phosphopantothenate-- 97.4 0.00047 1E-08 36.7 4.5 33 7-39 16-49 (229)
337 PRK09496 trkA potassium transp 97.4 0.0011 2.4E-08 37.9 6.2 40 8-48 2-41 (453)
338 PRK14191 bifunctional 5,10-met 97.4 0.0015 3.2E-08 36.1 6.3 43 3-45 154-196 (285)
339 PRK10792 bifunctional 5,10-met 97.4 0.0011 2.5E-08 36.5 5.8 43 3-45 156-198 (285)
340 cd00401 AdoHcyase S-adenosyl-L 97.4 0.0012 2.7E-08 38.0 6.1 41 4-45 200-240 (413)
341 PRK08306 dipicolinate synthase 97.4 0.0016 3.4E-08 36.0 6.3 39 4-43 150-188 (296)
342 PRK00045 hemA glutamyl-tRNA re 97.4 0.0012 2.6E-08 38.0 5.9 47 3-50 179-226 (423)
343 PF04127 DFP: DNA / pantothena 97.4 0.00099 2.1E-08 34.6 5.1 36 4-39 1-52 (185)
344 COG1064 AdhP Zn-dependent alco 97.4 0.0014 3.1E-08 36.9 6.0 42 5-47 166-207 (339)
345 cd08266 Zn_ADH_like1 Alcohol d 97.4 0.0016 3.4E-08 35.4 6.1 41 5-45 166-206 (342)
346 PRK06718 precorrin-2 dehydroge 97.4 0.00071 1.5E-08 35.5 4.5 37 3-40 7-43 (202)
347 PRK06719 precorrin-2 dehydroge 97.4 0.00079 1.7E-08 34.0 4.5 35 3-38 10-44 (157)
348 PRK05476 S-adenosyl-L-homocyst 97.3 0.0014 3E-08 38.0 5.9 39 4-43 210-248 (425)
349 PF03435 Saccharop_dh: Sacchar 97.3 0.0013 2.9E-08 37.1 5.8 40 9-49 1-42 (386)
350 PRK14190 bifunctional 5,10-met 97.3 0.0016 3.4E-08 36.0 5.8 43 3-45 155-197 (284)
351 PF13241 NAD_binding_7: Putati 97.3 0.0004 8.7E-09 32.7 3.1 37 3-40 4-40 (103)
352 TIGR02114 coaB_strep phosphopa 97.3 0.00042 9.1E-09 36.9 3.5 31 8-38 16-47 (227)
353 PRK01438 murD UDP-N-acetylmura 97.3 0.0011 2.4E-08 38.4 5.4 36 4-40 14-49 (480)
354 PRK07819 3-hydroxybutyryl-CoA 97.3 0.001 2.2E-08 36.5 5.0 38 7-45 6-43 (286)
355 COG1089 Gmd GDP-D-mannose dehy 97.3 0.00086 1.9E-08 37.3 4.6 35 6-40 2-36 (345)
356 TIGR03443 alpha_am_amid L-amin 97.3 0.0012 2.7E-08 42.2 5.7 35 6-40 971-1009(1389)
357 PRK07530 3-hydroxybutyryl-CoA 97.3 0.0018 3.8E-08 35.4 5.7 38 7-45 5-42 (292)
358 PRK12749 quinate/shikimate deh 97.3 0.002 4.4E-08 35.5 5.9 46 4-50 122-171 (288)
359 PRK14189 bifunctional 5,10-met 97.3 0.0015 3.2E-08 36.1 5.4 42 3-44 155-196 (285)
360 PF03446 NAD_binding_2: NAD bi 97.3 0.0027 5.8E-08 32.1 6.0 41 8-49 3-43 (163)
361 PRK14176 bifunctional 5,10-met 97.3 0.0018 4E-08 35.8 5.7 43 3-45 161-203 (287)
362 cd08268 MDR2 Medium chain dehy 97.3 0.0021 4.5E-08 34.7 5.9 41 5-45 144-184 (328)
363 cd05213 NAD_bind_Glutamyl_tRNA 97.3 0.002 4.3E-08 35.7 5.8 46 4-50 176-222 (311)
364 TIGR01470 cysG_Nterm siroheme 97.3 0.003 6.5E-08 33.2 6.2 37 3-40 6-42 (205)
365 PRK04308 murD UDP-N-acetylmura 97.3 0.0016 3.4E-08 37.5 5.5 37 4-41 3-39 (445)
366 PRK06129 3-hydroxyacyl-CoA deh 97.3 0.0018 3.8E-08 35.8 5.5 37 8-45 4-40 (308)
367 COG2085 Predicted dinucleotide 97.3 0.0015 3.3E-08 34.6 5.0 41 9-49 3-44 (211)
368 TIGR00518 alaDH alanine dehydr 97.3 0.0028 6E-08 36.0 6.3 43 4-47 165-207 (370)
369 cd01079 NAD_bind_m-THF_DH NAD 97.2 0.0018 3.8E-08 34.1 5.1 35 3-37 59-93 (197)
370 PF00056 Ldh_1_N: lactate/mala 97.2 0.0023 4.9E-08 31.8 5.3 40 8-47 2-43 (141)
371 PRK04148 hypothetical protein; 97.2 0.0019 4.2E-08 32.0 4.9 42 5-48 16-57 (134)
372 PRK14177 bifunctional 5,10-met 97.2 0.0017 3.7E-08 35.8 5.2 42 3-44 156-197 (284)
373 PRK14173 bifunctional 5,10-met 97.2 0.0018 3.9E-08 35.8 5.3 42 3-44 152-193 (287)
374 cd05291 HicDH_like L-2-hydroxy 97.2 0.0017 3.7E-08 35.9 5.2 42 8-50 2-45 (306)
375 PRK14180 bifunctional 5,10-met 97.2 0.002 4.3E-08 35.6 5.3 42 3-44 155-196 (282)
376 PRK14188 bifunctional 5,10-met 97.2 0.0025 5.4E-08 35.4 5.8 38 3-40 155-193 (296)
377 PLN02494 adenosylhomocysteinas 97.2 0.0025 5.5E-08 37.4 6.0 38 4-42 252-289 (477)
378 PRK14172 bifunctional 5,10-met 97.2 0.0019 4.1E-08 35.6 5.2 43 3-45 155-197 (278)
379 PRK09880 L-idonate 5-dehydroge 97.2 0.0029 6.3E-08 35.1 6.0 41 5-46 169-210 (343)
380 TIGR02354 thiF_fam2 thiamine b 97.2 0.00056 1.2E-08 35.8 3.1 35 4-39 19-54 (200)
381 TIGR03201 dearomat_had 6-hydro 97.2 0.0027 5.8E-08 35.3 5.9 40 5-45 166-205 (349)
382 PF01210 NAD_Gly3P_dh_N: NAD-d 97.2 0.002 4.4E-08 32.4 5.0 38 9-47 2-39 (157)
383 PRK09260 3-hydroxybutyryl-CoA 97.2 0.0023 5.1E-08 34.9 5.5 39 7-46 2-40 (288)
384 cd08289 MDR_yhfp_like Yhfp put 97.2 0.0031 6.8E-08 34.4 6.1 40 6-45 147-186 (326)
385 TIGR02824 quinone_pig3 putativ 97.2 0.0033 7.2E-08 33.9 6.1 40 5-44 139-178 (325)
386 PRK14183 bifunctional 5,10-met 97.2 0.0022 4.8E-08 35.4 5.3 42 3-44 154-195 (281)
387 PRK07502 cyclohexadienyl dehyd 97.2 0.0039 8.5E-08 34.4 6.2 45 1-46 1-47 (307)
388 PRK06035 3-hydroxyacyl-CoA deh 97.2 0.0017 3.7E-08 35.5 4.8 38 7-45 4-41 (291)
389 PRK14618 NAD(P)H-dependent gly 97.1 0.0039 8.4E-08 34.6 6.2 39 8-47 6-44 (328)
390 PTZ00075 Adenosylhomocysteinas 97.1 0.0036 7.9E-08 36.8 6.2 40 3-43 251-290 (476)
391 PRK14186 bifunctional 5,10-met 97.1 0.0024 5.3E-08 35.5 5.2 42 3-44 155-196 (297)
392 cd08270 MDR4 Medium chain dehy 97.1 0.0039 8.4E-08 33.7 6.0 42 5-46 132-173 (305)
393 PRK14170 bifunctional 5,10-met 97.1 0.0024 5.2E-08 35.3 5.2 42 3-44 154-195 (284)
394 cd05288 PGDH Prostaglandin deh 97.1 0.0042 9E-08 33.9 6.1 42 5-46 145-186 (329)
395 PRK14169 bifunctional 5,10-met 97.1 0.0027 5.9E-08 35.0 5.2 36 3-38 153-188 (282)
396 PF02254 TrkA_N: TrkA-N domain 97.1 0.005 1.1E-07 29.1 5.7 40 9-49 1-40 (116)
397 PF03721 UDPG_MGDP_dh_N: UDP-g 97.1 0.0034 7.4E-08 32.5 5.4 40 8-48 2-41 (185)
398 PLN00203 glutamyl-tRNA reducta 97.1 0.0026 5.7E-08 37.7 5.4 46 4-50 264-310 (519)
399 PRK14166 bifunctional 5,10-met 97.1 0.0028 6E-08 35.0 5.2 42 3-44 154-195 (282)
400 PRK08293 3-hydroxybutyryl-CoA 97.1 0.0038 8.2E-08 34.1 5.7 39 7-46 4-42 (287)
401 PRK07066 3-hydroxybutyryl-CoA 97.1 0.0039 8.4E-08 35.0 5.8 38 7-45 8-45 (321)
402 cd05188 MDR Medium chain reduc 97.1 0.0037 8.1E-08 32.9 5.6 40 5-45 134-173 (271)
403 PRK14187 bifunctional 5,10-met 97.1 0.0028 6.1E-08 35.2 5.1 42 3-44 157-198 (294)
404 COG3320 Putative dehydrogenase 97.1 0.0027 5.8E-08 36.3 5.1 33 7-39 1-34 (382)
405 TIGR02822 adh_fam_2 zinc-bindi 97.1 0.0047 1E-07 34.2 6.0 39 5-44 165-203 (329)
406 PLN02516 methylenetetrahydrofo 97.1 0.0034 7.3E-08 34.9 5.3 43 3-45 164-206 (299)
407 TIGR00936 ahcY adenosylhomocys 97.1 0.0048 1E-07 35.7 6.0 39 4-43 193-231 (406)
408 PRK06522 2-dehydropantoate 2-r 97.1 0.0046 9.9E-08 33.7 5.8 38 8-46 2-39 (304)
409 PRK14171 bifunctional 5,10-met 97.0 0.0032 6.9E-08 34.9 5.1 42 3-44 156-197 (288)
410 PRK14179 bifunctional 5,10-met 97.0 0.0032 7E-08 34.8 5.1 35 3-37 155-189 (284)
411 cd01336 MDH_cytoplasmic_cytoso 97.0 0.0033 7.1E-08 35.2 5.2 34 7-40 3-43 (325)
412 PF02558 ApbA: Ketopantoate re 97.0 0.0038 8.2E-08 30.8 5.0 34 10-45 2-35 (151)
413 cd08244 MDR_enoyl_red Possible 97.0 0.0064 1.4E-07 33.1 6.1 41 5-45 142-182 (324)
414 PRK14182 bifunctional 5,10-met 97.0 0.0041 8.9E-08 34.4 5.3 42 3-44 154-195 (282)
415 cd08250 Mgc45594_like Mgc45594 97.0 0.0059 1.3E-07 33.4 6.0 40 5-44 139-178 (329)
416 PRK06249 2-dehydropantoate 2-r 97.0 0.0057 1.2E-07 33.8 5.8 37 4-41 3-39 (313)
417 cd08241 QOR1 Quinone oxidoredu 97.0 0.0062 1.3E-07 32.8 5.9 40 5-44 139-178 (323)
418 cd08243 quinone_oxidoreductase 97.0 0.0074 1.6E-07 32.6 6.1 41 5-45 142-182 (320)
419 PRK07688 thiamine/molybdopteri 97.0 0.0033 7.1E-08 35.4 4.8 36 4-40 22-58 (339)
420 PRK00141 murD UDP-N-acetylmura 97.0 0.0055 1.2E-07 35.7 5.8 39 4-43 13-51 (473)
421 PRK05708 2-dehydropantoate 2-r 96.9 0.006 1.3E-07 33.8 5.7 39 7-46 3-41 (305)
422 PRK09496 trkA potassium transp 96.9 0.0065 1.4E-07 34.9 6.0 43 5-48 230-272 (453)
423 cd05280 MDR_yhdh_yhfp Yhdh and 96.9 0.0079 1.7E-07 32.7 6.1 40 6-45 147-186 (325)
424 cd08246 crotonyl_coA_red croto 96.9 0.0076 1.7E-07 34.0 6.1 41 5-45 193-233 (393)
425 cd08239 THR_DH_like L-threonin 96.9 0.0057 1.2E-07 33.7 5.5 40 5-45 163-203 (339)
426 COG3268 Uncharacterized conser 96.9 0.0033 7.1E-08 35.7 4.4 48 5-52 5-52 (382)
427 cd08292 ETR_like_2 2-enoyl thi 96.9 0.0078 1.7E-07 32.8 5.9 40 5-44 139-178 (324)
428 PRK14178 bifunctional 5,10-met 96.9 0.0082 1.8E-07 33.2 5.8 45 3-47 149-193 (279)
429 PRK10669 putative cation:proto 96.9 0.0052 1.1E-07 36.5 5.4 41 7-48 418-458 (558)
430 TIGR00715 precor6x_red precorr 96.9 0.0023 5.1E-08 34.8 3.7 34 8-42 2-35 (256)
431 PRK14184 bifunctional 5,10-met 96.9 0.0069 1.5E-07 33.6 5.5 44 3-46 154-201 (286)
432 PRK12475 thiamine/molybdopteri 96.9 0.0035 7.5E-08 35.3 4.4 36 4-40 22-58 (338)
433 TIGR01751 crot-CoA-red crotony 96.9 0.0087 1.9E-07 33.9 6.0 40 5-44 189-228 (398)
434 cd05286 QOR2 Quinone oxidoredu 96.8 0.0096 2.1E-07 32.0 5.9 41 5-45 136-176 (320)
435 PLN02616 tetrahydrofolate dehy 96.8 0.005 1.1E-07 35.1 4.9 43 3-45 228-270 (364)
436 PRK13771 putative alcohol dehy 96.8 0.01 2.2E-07 32.6 6.1 40 5-44 162-201 (334)
437 PRK14193 bifunctional 5,10-met 96.8 0.0062 1.3E-07 33.7 5.1 42 3-44 155-198 (284)
438 PLN02897 tetrahydrofolate dehy 96.8 0.0054 1.2E-07 34.8 5.0 42 3-44 211-252 (345)
439 TIGR03366 HpnZ_proposed putati 96.8 0.0081 1.7E-07 32.5 5.6 39 5-44 120-159 (280)
440 PTZ00354 alcohol dehydrogenase 96.8 0.011 2.3E-07 32.3 6.0 41 5-45 140-180 (334)
441 cd08296 CAD_like Cinnamyl alco 96.8 0.01 2.3E-07 32.7 6.0 40 5-45 163-202 (333)
442 COG0373 HemA Glutamyl-tRNA red 96.8 0.0081 1.8E-07 34.9 5.6 48 3-51 175-223 (414)
443 TIGR02817 adh_fam_1 zinc-bindi 96.8 0.0092 2E-07 32.7 5.8 40 6-45 149-189 (336)
444 PRK12409 D-amino acid dehydrog 96.8 0.0056 1.2E-07 34.7 5.0 32 8-40 3-34 (410)
445 cd08230 glucose_DH Glucose deh 96.8 0.01 2.2E-07 33.1 6.0 33 5-38 172-204 (355)
446 PRK06130 3-hydroxybutyryl-CoA 96.8 0.0094 2E-07 32.9 5.7 39 7-46 5-43 (311)
447 cd08238 sorbose_phosphate_red 96.8 0.0085 1.8E-07 34.2 5.7 41 6-46 176-219 (410)
448 PLN02545 3-hydroxybutyryl-CoA 96.8 0.0065 1.4E-07 33.3 5.1 37 7-44 5-41 (295)
449 PF00070 Pyr_redox: Pyridine n 96.8 0.011 2.5E-07 26.3 5.1 32 9-41 2-33 (80)
450 PTZ00082 L-lactate dehydrogena 96.8 0.01 2.2E-07 33.2 5.8 41 1-42 1-42 (321)
451 PRK07417 arogenate dehydrogena 96.8 0.0098 2.1E-07 32.5 5.6 38 8-46 2-39 (279)
452 KOG1198|consensus 96.8 0.0082 1.8E-07 34.0 5.4 37 5-41 157-193 (347)
453 PRK13243 glyoxylate reductase; 96.8 0.0073 1.6E-07 33.9 5.2 38 3-41 147-184 (333)
454 PRK07236 hypothetical protein; 96.8 0.0082 1.8E-07 33.9 5.4 39 1-40 1-39 (386)
455 cd05311 NAD_bind_2_malic_enz N 96.8 0.0073 1.6E-07 32.2 4.9 36 3-39 22-60 (226)
456 COG0190 FolD 5,10-methylene-te 96.8 0.0068 1.5E-07 33.5 4.8 38 3-40 153-190 (283)
457 PRK03806 murD UDP-N-acetylmura 96.7 0.0073 1.6E-07 34.7 5.2 39 1-40 1-39 (438)
458 cd05191 NAD_bind_amino_acid_DH 96.7 0.014 3E-07 26.5 5.2 34 4-38 21-55 (86)
459 PRK00094 gpsA NAD(P)H-dependen 96.7 0.012 2.7E-07 32.4 5.9 40 8-48 3-42 (325)
460 cd08288 MDR_yhdh Yhdh putative 96.7 0.015 3.2E-07 31.8 6.1 39 6-44 147-185 (324)
461 PRK12921 2-dehydropantoate 2-r 96.7 0.011 2.3E-07 32.4 5.5 37 8-46 2-38 (305)
462 PRK13982 bifunctional SbtC-lik 96.7 0.007 1.5E-07 35.7 5.0 35 3-37 253-303 (475)
463 TIGR02818 adh_III_F_hyde S-(hy 96.7 0.012 2.7E-07 33.0 5.9 40 5-45 185-225 (368)
464 PLN02740 Alcohol dehydrogenase 96.7 0.011 2.4E-07 33.4 5.7 41 5-46 198-239 (381)
465 cd05282 ETR_like 2-enoyl thioe 96.7 0.012 2.7E-07 31.9 5.7 40 5-44 138-177 (323)
466 KOG1221|consensus 96.7 0.0039 8.4E-08 36.6 3.9 36 4-39 10-48 (467)
467 PRK12480 D-lactate dehydrogena 96.7 0.011 2.4E-07 33.2 5.6 38 4-42 144-181 (330)
468 smart00829 PKS_ER Enoylreducta 96.7 0.017 3.6E-07 30.6 6.1 40 5-44 104-143 (288)
469 PRK14181 bifunctional 5,10-met 96.7 0.0095 2.1E-07 33.0 5.1 42 3-44 150-195 (287)
470 COG4982 3-oxoacyl-[acyl-carrie 96.7 0.0074 1.6E-07 37.0 5.0 35 4-38 394-429 (866)
471 PRK06487 glycerate dehydrogena 96.7 0.0044 9.5E-08 34.6 3.9 36 3-39 145-180 (317)
472 PRK11199 tyrA bifunctional cho 96.7 0.0065 1.4E-07 34.6 4.6 34 7-40 99-132 (374)
473 PRK14174 bifunctional 5,10-met 96.6 0.016 3.6E-07 32.2 5.9 44 3-46 156-203 (295)
474 PRK11064 wecC UDP-N-acetyl-D-m 96.6 0.015 3.3E-07 33.5 6.0 39 7-46 4-42 (415)
475 COG1648 CysG Siroheme synthase 96.6 0.011 2.5E-07 31.3 5.1 45 3-48 9-54 (210)
476 TIGR02356 adenyl_thiF thiazole 96.6 0.0074 1.6E-07 31.6 4.4 35 4-39 19-54 (202)
477 PRK14620 NAD(P)H-dependent gly 96.6 0.015 3.2E-07 32.3 5.8 38 8-46 2-39 (326)
478 PRK01390 murD UDP-N-acetylmura 96.6 0.013 2.8E-07 34.0 5.7 37 4-41 7-43 (460)
479 cd01076 NAD_bind_1_Glu_DH NAD( 96.6 0.019 4.1E-07 30.8 5.9 35 3-38 28-63 (227)
480 PLN02928 oxidoreductase family 96.6 0.011 2.4E-07 33.5 5.1 36 3-39 156-191 (347)
481 cd08291 ETR_like_1 2-enoyl thi 96.6 0.016 3.5E-07 31.8 5.7 40 7-46 145-184 (324)
482 PRK15116 sulfur acceptor prote 96.6 0.0053 1.2E-07 33.7 3.8 35 4-39 28-63 (268)
483 cd00650 LDH_MDH_like NAD-depen 96.6 0.0041 8.8E-08 33.7 3.3 38 9-46 1-42 (263)
484 cd08237 ribitol-5-phosphate_DH 96.6 0.016 3.5E-07 32.3 5.7 41 5-46 163-205 (341)
485 cd08300 alcohol_DH_class_III c 96.6 0.02 4.2E-07 32.2 6.1 40 5-45 186-226 (368)
486 TIGR02279 PaaC-3OHAcCoADH 3-hy 96.6 0.0081 1.8E-07 35.5 4.7 38 7-45 6-43 (503)
487 KOG1204|consensus 96.6 0.0041 9E-08 33.6 3.2 28 3-30 3-30 (253)
488 cd08297 CAD3 Cinnamyl alcohol 96.6 0.022 4.7E-07 31.4 6.1 40 5-44 165-204 (341)
489 PLN00106 malate dehydrogenase 96.5 0.015 3.2E-07 32.7 5.4 35 6-40 18-54 (323)
490 PLN02586 probable cinnamyl alc 96.5 0.017 3.8E-07 32.4 5.7 37 5-42 183-219 (360)
491 PRK08268 3-hydroxy-acyl-CoA de 96.5 0.013 2.7E-07 34.8 5.3 39 7-46 8-46 (507)
492 PRK07531 bifunctional 3-hydrox 96.5 0.021 4.5E-07 33.7 6.1 37 8-45 6-42 (495)
493 PRK14168 bifunctional 5,10-met 96.5 0.013 2.7E-07 32.7 5.0 37 3-39 158-198 (297)
494 PRK08328 hypothetical protein; 96.5 0.011 2.3E-07 31.7 4.6 36 4-40 25-61 (231)
495 PRK09424 pntA NAD(P) transhydr 96.5 0.021 4.6E-07 34.0 6.1 41 5-46 164-204 (509)
496 PRK14167 bifunctional 5,10-met 96.5 0.014 3E-07 32.6 5.0 37 3-39 154-194 (297)
497 TIGR03451 mycoS_dep_FDH mycoth 96.5 0.019 4.2E-07 32.1 5.7 40 5-45 176-216 (358)
498 cd05294 LDH-like_MDH_nadp A la 96.5 0.0096 2.1E-07 33.1 4.4 33 8-40 2-36 (309)
499 PRK08410 2-hydroxyacid dehydro 96.5 0.016 3.4E-07 32.4 5.2 37 3-40 142-178 (311)
500 PRK11259 solA N-methyltryptoph 96.5 0.011 2.3E-07 33.1 4.7 31 9-40 6-36 (376)
No 1
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.60 E-value=3.8e-15 Score=79.57 Aligned_cols=53 Identities=28% Similarity=0.417 Sum_probs=48.1
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCce
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVE 53 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~ 53 (62)
|..+++++++|||+|+|||.++++.|+++|++++++.|++++++++.++++..
T Consensus 1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~ 53 (265)
T COG0300 1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK 53 (265)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh
Confidence 35578899999999999999999999999999999999999999988887653
No 2
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.57 E-value=1.8e-14 Score=75.94 Aligned_cols=52 Identities=35% Similarity=0.473 Sum_probs=48.5
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
|..+.+|+++|||+++|||.++++.|++.|++|++.+|+.++++++..++..
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~ 52 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA 52 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc
Confidence 6677889999999999999999999999999999999999999999988863
No 3
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.48 E-value=2e-13 Score=71.94 Aligned_cols=50 Identities=34% Similarity=0.427 Sum_probs=43.9
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+++++++++|||+++|||.++++.|+++|++|++++|++++.++..+++
T Consensus 1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (254)
T PRK07478 1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEI 50 (254)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67788999999999999999999999999999999999887766655443
No 4
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.47 E-value=2.8e-13 Score=72.44 Aligned_cols=50 Identities=28% Similarity=0.327 Sum_probs=44.1
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|..+++|+++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l 50 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHL 50 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 67788999999999999999999999999999999999887766655444
No 5
>PRK06194 hypothetical protein; Provisional
Probab=99.44 E-value=6.5e-13 Score=70.97 Aligned_cols=49 Identities=24% Similarity=0.411 Sum_probs=42.5
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
|.++++++++|||+++|||.++++.|+++|++|++++|+.+.+++..++
T Consensus 1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~ 49 (287)
T PRK06194 1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAE 49 (287)
T ss_pred CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH
Confidence 6678889999999999999999999999999999999987665555443
No 6
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.43 E-value=7e-13 Score=69.88 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=42.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++++|+++|||+++|||.++++.|+++|++|++++|+++..++..+++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 53 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI 53 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999887776665544
No 7
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.43 E-value=6e-13 Score=72.32 Aligned_cols=50 Identities=30% Similarity=0.386 Sum_probs=43.1
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+++++++++|||+++|||.++++.|+++|++|++++|++++.++..+++
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l 58 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAI 58 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999987766555443
No 8
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.43 E-value=6.3e-13 Score=72.89 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=43.9
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|.++.+++++|||+++|||+++++.|+++|++|++++|+++.+++..+++
T Consensus 2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~ 51 (330)
T PRK06139 2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEEC 51 (330)
T ss_pred CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 44578899999999999999999999999999999999988777665544
No 9
>PRK08589 short chain dehydrogenase; Validated
Probab=99.42 E-value=8.1e-13 Score=70.44 Aligned_cols=49 Identities=22% Similarity=0.354 Sum_probs=41.9
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|.++++|+++|||+++|||.++++.|+++|++|++++|+ +.+++..+++
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~ 49 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKI 49 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHH
Confidence 567889999999999999999999999999999999998 5555544443
No 10
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.42 E-value=1.3e-12 Score=71.07 Aligned_cols=50 Identities=26% Similarity=0.286 Sum_probs=43.9
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+.+.+++++|||+++|||.++++.|+++|++|++++|+.+..++..+++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l 50 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL 50 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 66678999999999999999999999999999999999887776655544
No 11
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.42 E-value=1.5e-12 Score=68.99 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=43.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|.++++++++|||+++|||.++++.|+++|++|++++|+++..++..+++
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL 50 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 66788999999999999999999999999999999999887666555443
No 12
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.41 E-value=1.3e-12 Score=69.05 Aligned_cols=49 Identities=27% Similarity=0.413 Sum_probs=42.8
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.++.+|+++|||+++|||.++++.|+++|++|++++|+++..++..+++
T Consensus 3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~ 51 (260)
T PRK07063 3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAI 51 (260)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999887776665544
No 13
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.39 E-value=1.9e-12 Score=68.24 Aligned_cols=48 Identities=27% Similarity=0.370 Sum_probs=41.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+|+++|||++++||.++++.|+++|++|++.+|+++..++..+.+
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i 54 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESL 54 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887665554443
No 14
>KOG1205|consensus
Probab=99.39 E-value=4e-13 Score=72.39 Aligned_cols=51 Identities=43% Similarity=0.658 Sum_probs=43.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPK 51 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (62)
|.++.+|+++|||+|+|||.+++..|+++|++++++.|...+++...++++
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~ 57 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELR 57 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHH
Confidence 346789999999999999999999999999999999988777776655543
No 15
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.39 E-value=2.2e-12 Score=67.86 Aligned_cols=48 Identities=31% Similarity=0.425 Sum_probs=41.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+++++++++|||++++||.++++.|+++|++|++++|+.+..+...++
T Consensus 4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~ 51 (252)
T PRK07035 4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA 51 (252)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 457789999999999999999999999999999999987766555444
No 16
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2e-12 Score=67.71 Aligned_cols=48 Identities=23% Similarity=0.255 Sum_probs=42.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++++++|||+++|||++++..|+++|++|++++|+++.+++..+++
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i 49 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQC 49 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 578899999999999999999999999999999999988776665443
No 17
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.38 E-value=1.9e-12 Score=70.31 Aligned_cols=40 Identities=33% Similarity=0.457 Sum_probs=36.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|.++.+|+++|||+++|||.++++.|++.|++|++++|+.
T Consensus 3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~ 42 (305)
T PRK08303 3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRST 42 (305)
T ss_pred CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 4567899999999999999999999999999999999973
No 18
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.38 E-value=2.3e-12 Score=68.55 Aligned_cols=48 Identities=19% Similarity=0.358 Sum_probs=41.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++|+++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (263)
T PRK08339 5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI 52 (263)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 367899999999999999999999999999999999987766555443
No 19
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.38 E-value=3e-12 Score=67.49 Aligned_cols=50 Identities=26% Similarity=0.321 Sum_probs=42.2
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|.++++++++|||++++||.++++.|+++|++|++++|+++..++..+++
T Consensus 2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (262)
T PRK13394 2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEI 51 (262)
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Confidence 34577899999999999999999999999999999999886665554443
No 20
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.37 E-value=2.4e-12 Score=68.38 Aligned_cols=47 Identities=23% Similarity=0.375 Sum_probs=41.0
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
|+++++++++|||++++||.++++.|+++|++|++++|+++..++..
T Consensus 4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 50 (264)
T PRK07576 4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAV 50 (264)
T ss_pred cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45678899999999999999999999999999999999877655443
No 21
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.37 E-value=2.6e-12 Score=70.48 Aligned_cols=49 Identities=27% Similarity=0.324 Sum_probs=42.6
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
..+.+++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l 52 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEI 52 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999987776655544
No 22
>KOG0725|consensus
Probab=99.37 E-value=3.1e-12 Score=68.78 Aligned_cols=49 Identities=31% Similarity=0.462 Sum_probs=43.5
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.++.+|+++|||+++|||++++..|++.|++|++++|+++.++....++
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~ 52 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQEL 52 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999998876665543
No 23
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.36 E-value=3.3e-12 Score=67.31 Aligned_cols=48 Identities=23% Similarity=0.275 Sum_probs=41.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+|+++|||++++||.+++++|+++|++|++++|+++..++..+++
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l 53 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKL 53 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999877666554443
No 24
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.35 E-value=4.1e-12 Score=68.31 Aligned_cols=40 Identities=33% Similarity=0.354 Sum_probs=36.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|..+++++++|||+++|||.++++.|+++|++|++++++.
T Consensus 1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 5667899999999999999999999999999999998765
No 25
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.35 E-value=3.4e-12 Score=68.98 Aligned_cols=47 Identities=30% Similarity=0.377 Sum_probs=40.5
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
|+++.+++++|||+++|||.++++.|+++|++|++++|+.+..++..
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~ 57 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAA 57 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34567899999999999999999999999999999999877655433
No 26
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.35 E-value=4.8e-12 Score=66.40 Aligned_cols=48 Identities=27% Similarity=0.430 Sum_probs=41.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
|.++++++++|||++++||.++++.|+++|++|++++|+++..+...+
T Consensus 1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~ 48 (250)
T PRK07774 1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAK 48 (250)
T ss_pred CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 677889999999999999999999999999999999998765544433
No 27
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.35 E-value=6.1e-12 Score=66.91 Aligned_cols=48 Identities=21% Similarity=0.243 Sum_probs=41.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 49 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL 49 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence 467899999999999999999999999999999999988776555443
No 28
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.35 E-value=6.5e-12 Score=66.29 Aligned_cols=50 Identities=30% Similarity=0.398 Sum_probs=43.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+++.+++++|||++++||.++++.|+++|++|++++|+.+..++..+++
T Consensus 1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~ 50 (257)
T PRK07067 1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI 50 (257)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh
Confidence 66788999999999999999999999999999999999887766555443
No 29
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.35 E-value=5.9e-12 Score=66.69 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=43.4
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+.+++++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 50 (263)
T PRK06200 1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF 50 (263)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 56678999999999999999999999999999999999887766655443
No 30
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.35 E-value=5.5e-12 Score=65.70 Aligned_cols=50 Identities=28% Similarity=0.378 Sum_probs=45.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
.+.+.+++||||++|||++++++|.+.|.+|++++|+++++++..++.+.
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~ 51 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE 51 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcc
Confidence 46789999999999999999999999999999999999999888776643
No 31
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.34 E-value=5.3e-12 Score=66.46 Aligned_cols=47 Identities=26% Similarity=0.396 Sum_probs=40.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++..++..++
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVAL 50 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999988766554443
No 32
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.34 E-value=5.4e-12 Score=68.11 Aligned_cols=48 Identities=33% Similarity=0.482 Sum_probs=41.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.+.+++++|||+++|||.++++.|+++|++|++++|+.+.+++..+++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l 84 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRI 84 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356799999999999999999999999999999999987766655443
No 33
>KOG1014|consensus
Probab=99.34 E-value=2.2e-12 Score=70.00 Aligned_cols=48 Identities=27% Similarity=0.454 Sum_probs=44.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCce
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVE 53 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~ 53 (62)
+++++|||++.|||++.+++|+++|.+|++++|++++++.+.+|+...
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~ 96 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK 96 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999999999888877543
No 34
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.34 E-value=5.4e-12 Score=66.47 Aligned_cols=47 Identities=34% Similarity=0.422 Sum_probs=40.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+.+++++|||++++||.++++.|+++|++|++++|+++..++..+++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEI 49 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999999887665554443
No 35
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.33 E-value=8.2e-12 Score=65.39 Aligned_cols=49 Identities=31% Similarity=0.340 Sum_probs=41.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
|..+.+++++|||++++||.++++.|+++|++|++++|+++..+...++
T Consensus 2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 50 (250)
T PRK12939 2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAA 50 (250)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence 4457789999999999999999999999999999999987766554433
No 36
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.33 E-value=6.8e-12 Score=66.88 Aligned_cols=48 Identities=29% Similarity=0.430 Sum_probs=41.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++..++..+++
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 54 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEI 54 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356899999999999999999999999999999999877665555443
No 37
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.33 E-value=6.5e-12 Score=66.53 Aligned_cols=48 Identities=27% Similarity=0.351 Sum_probs=41.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 52 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARL 52 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887766554433
No 38
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.32 E-value=8.9e-12 Score=65.15 Aligned_cols=48 Identities=27% Similarity=0.390 Sum_probs=40.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
|.++++++++|||++++||..++++|+++|++|++++|+++..++..+
T Consensus 2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~ 49 (239)
T PRK07666 2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAE 49 (239)
T ss_pred CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 334678999999999999999999999999999999998766554443
No 39
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.32 E-value=1.2e-11 Score=65.27 Aligned_cols=48 Identities=27% Similarity=0.329 Sum_probs=41.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.+.+++++|||++++||.++++.|+++|++|++++|++...++..+++
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 51 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV 51 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc
Confidence 467899999999999999999999999999999999877665554433
No 40
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.32 E-value=1e-11 Score=64.97 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=40.4
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
|.++++++++|||+++++|.++++.|+++|++|++++|+++......
T Consensus 1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~ 47 (251)
T PRK12826 1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATA 47 (251)
T ss_pred CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45677899999999999999999999999999999999876554433
No 41
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.31 E-value=1.7e-11 Score=64.97 Aligned_cols=46 Identities=30% Similarity=0.472 Sum_probs=40.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++++++|||+++|||.++++.|+++|++|++++|+.+..+++.+
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~ 47 (262)
T TIGR03325 2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA 47 (262)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 4678999999999999999999999999999999998876665544
No 42
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.31 E-value=1e-11 Score=65.57 Aligned_cols=41 Identities=29% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
|.++.+++++|||+++|||.++++.|+++|++|++++|+.+
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~ 43 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD 43 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 45678999999999999999999999999999999998653
No 43
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.31 E-value=1.2e-11 Score=65.26 Aligned_cols=48 Identities=27% Similarity=0.379 Sum_probs=41.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++.++...+++
T Consensus 8 ~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 55 (256)
T PRK06124 8 SLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAAL 55 (256)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887665554443
No 44
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.30 E-value=5.9e-12 Score=68.82 Aligned_cols=46 Identities=28% Similarity=0.436 Sum_probs=41.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.+++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l 97 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSI 97 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Confidence 4789999999999999999999999999999999998877666554
No 45
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.30 E-value=1.2e-11 Score=65.90 Aligned_cols=40 Identities=23% Similarity=0.289 Sum_probs=36.2
Q ss_pred CCCCCCcEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACS--SLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|..+++|+++|||+++ |||+++++.|+++|++|++++|+.
T Consensus 1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~ 42 (262)
T PRK07984 1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 42 (262)
T ss_pred CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch
Confidence 6678899999999985 999999999999999999998873
No 46
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.2e-11 Score=64.73 Aligned_cols=48 Identities=33% Similarity=0.516 Sum_probs=42.4
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
|.++++++++|||++++||.++++.|+++|++|++++|+++..+...+
T Consensus 1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~ 48 (239)
T PRK08703 1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYD 48 (239)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH
Confidence 667889999999999999999999999999999999998876655443
No 47
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.30 E-value=1.8e-11 Score=63.82 Aligned_cols=50 Identities=24% Similarity=0.379 Sum_probs=42.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+.+.+++++|||+++++|..++++|+++|++|++++|+++..++..+++
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l 50 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAEL 50 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHH
Confidence 56677899999999999999999999999999999999887665554433
No 48
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.1e-11 Score=66.14 Aligned_cols=41 Identities=24% Similarity=0.373 Sum_probs=37.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
|+++.+++++|||+++|||.++++.|+++|++|++++|+.+
T Consensus 1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 56778899999999999999999999999999999999754
No 49
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.29 E-value=1.7e-11 Score=66.18 Aligned_cols=48 Identities=23% Similarity=0.350 Sum_probs=42.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 6 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l 53 (296)
T PRK05872 6 SLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL 53 (296)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 467899999999999999999999999999999999988777665554
No 50
>PRK12742 oxidoreductase; Provisional
Probab=99.29 E-value=2.4e-11 Score=63.38 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=38.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHHhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVRRS 46 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~~~ 46 (62)
|.++++++++|||++++||.++++.|+++|++|+++++ +++..+++
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l 47 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERL 47 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHH
Confidence 66788999999999999999999999999999988866 44444444
No 51
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.28 E-value=1.8e-11 Score=64.96 Aligned_cols=46 Identities=24% Similarity=0.319 Sum_probs=40.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+.+++++|||++++||.++++.|+++|++|++++|+++..++..+.
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~ 53 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQ 53 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5689999999999999999999999999999999988766555443
No 52
>PRK06720 hypothetical protein; Provisional
Probab=99.28 E-value=2.4e-11 Score=61.59 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=40.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++++++|||+++|||.++++.|++.|++|++++++++..++..+++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l 60 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEI 60 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 57899999999999999999999999999999999877665544433
No 53
>PRK09242 tropinone reductase; Provisional
Probab=99.28 E-value=2e-11 Score=64.43 Aligned_cols=48 Identities=25% Similarity=0.336 Sum_probs=41.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
.++.+|+++|||++++||.++++.|+++|++|++++|+.+..++..++
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~ 52 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDE 52 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH
Confidence 457789999999999999999999999999999999988776655443
No 54
>PRK06196 oxidoreductase; Provisional
Probab=99.28 E-value=2.3e-11 Score=66.08 Aligned_cols=46 Identities=35% Similarity=0.422 Sum_probs=40.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+.+++++|||+++|||.++++.|+++|++|++++|+++..++..++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~ 69 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG 69 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5679999999999999999999999999999999998776655443
No 55
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.28 E-value=1.8e-11 Score=64.69 Aligned_cols=37 Identities=24% Similarity=0.408 Sum_probs=34.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
++.+++++|||++++||.++++.|+++|++|++++|+
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 48 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG 48 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 4678999999999999999999999999999999987
No 56
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.27 E-value=2.6e-11 Score=63.54 Aligned_cols=49 Identities=24% Similarity=0.364 Sum_probs=42.3
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
|.++++++++|||++++||.++++.|+++|++|++++|+++..++..++
T Consensus 1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (249)
T PRK06500 1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE 49 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH
Confidence 6677889999999999999999999999999999999987665554443
No 57
>KOG1208|consensus
Probab=99.27 E-value=1.9e-11 Score=66.91 Aligned_cols=50 Identities=34% Similarity=0.424 Sum_probs=43.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
++.+++++|||+++|||.++++.|+.+|++|++..|+.+..++..+.+..
T Consensus 32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~ 81 (314)
T KOG1208|consen 32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK 81 (314)
T ss_pred cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999998877776666543
No 58
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.27 E-value=4.2e-11 Score=63.32 Aligned_cols=45 Identities=33% Similarity=0.397 Sum_probs=39.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++++|||++++||.++++.|+++|++|++++|+++.+++..+++
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~ 46 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL 46 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 468999999999999999999999999999999988776665544
No 59
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.5e-11 Score=63.73 Aligned_cols=47 Identities=26% Similarity=0.408 Sum_probs=41.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++++++++|||++++||.++++.|+++|++|++++|+++..++...+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 48 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAAR 48 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 46789999999999999999999999999999999998776655443
No 60
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.26 E-value=2.8e-11 Score=63.95 Aligned_cols=46 Identities=30% Similarity=0.440 Sum_probs=40.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++++++|||++++||.++++.|+++|++|++++|+.+..+...+
T Consensus 9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 54 (259)
T PRK08213 9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA 54 (259)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 4678999999999999999999999999999999998776554443
No 61
>PLN02253 xanthoxin dehydrogenase
Probab=99.26 E-value=3.8e-11 Score=64.09 Aligned_cols=48 Identities=21% Similarity=0.358 Sum_probs=40.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++..++..+++
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~ 62 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL 62 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh
Confidence 456899999999999999999999999999999999876655554443
No 62
>KOG1201|consensus
Probab=99.26 E-value=1.4e-11 Score=66.74 Aligned_cols=50 Identities=26% Similarity=0.308 Sum_probs=44.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
+..|++++|||+++|+|+.++.+++++|+++++.|.+.+..++..++++.
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~ 84 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK 84 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh
Confidence 35789999999999999999999999999999999998877777777653
No 63
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.26 E-value=2.6e-11 Score=63.73 Aligned_cols=46 Identities=28% Similarity=0.353 Sum_probs=40.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+.+++++|||+++++|.++++.|+++|++|++++|+++..+....+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~ 47 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEA 47 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 5678999999999999999999999999999999988766554443
No 64
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.26 E-value=4.4e-11 Score=62.55 Aligned_cols=47 Identities=36% Similarity=0.471 Sum_probs=40.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.+++++|||+++++|..+++.|+++|++|++++|+++..++..+.
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~ 52 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE 52 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999988766555443
No 65
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.26 E-value=2.8e-11 Score=64.04 Aligned_cols=41 Identities=27% Similarity=0.467 Sum_probs=38.0
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
|.++.+++++|||++++||.++++.|+++|++|++++|+..
T Consensus 1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~ 41 (263)
T PRK08226 1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE 41 (263)
T ss_pred CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH
Confidence 66788999999999999999999999999999999999764
No 66
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.25 E-value=3.6e-11 Score=63.10 Aligned_cols=40 Identities=35% Similarity=0.434 Sum_probs=36.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|.++++++++|||++++||.++++.|+++|++|++++|+.
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~ 40 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQK 40 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCc
Confidence 5667889999999999999999999999999999999865
No 67
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.25 E-value=4.6e-11 Score=62.11 Aligned_cols=44 Identities=25% Similarity=0.366 Sum_probs=38.9
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++++++++|||++++||..+++.|+++|++|++++|++++..+
T Consensus 3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~ 46 (239)
T PRK12828 3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQ 46 (239)
T ss_pred CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHH
Confidence 45788999999999999999999999999999999997765443
No 68
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.25 E-value=2.3e-11 Score=64.26 Aligned_cols=39 Identities=26% Similarity=0.474 Sum_probs=35.7
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++.+|+++|||+++|||++++++|+++|++|++++|+.
T Consensus 4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~ 42 (251)
T PRK12481 4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAE 42 (251)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCch
Confidence 357789999999999999999999999999999998864
No 69
>PRK08643 acetoin reductase; Validated
Probab=99.25 E-value=3.5e-11 Score=63.42 Aligned_cols=44 Identities=23% Similarity=0.362 Sum_probs=38.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+|+++|||++++||.++++.|+++|++|++++|+++..++...+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 45 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADK 45 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 68999999999999999999999999999999987766555443
No 70
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.25 E-value=4.2e-11 Score=62.85 Aligned_cols=47 Identities=36% Similarity=0.473 Sum_probs=40.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++++++++|||++++||..+++.|+++|++|++++|+.+..++..++
T Consensus 2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~ 48 (252)
T PRK06138 2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA 48 (252)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHH
Confidence 47889999999999999999999999999999999987765544443
No 71
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.25 E-value=5.1e-11 Score=62.43 Aligned_cols=47 Identities=34% Similarity=0.522 Sum_probs=40.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.+++++|||+++++|.++++.|+++|++|++++|+++..+.....
T Consensus 2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~ 48 (251)
T PRK07231 2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAE 48 (251)
T ss_pred CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999998766554443
No 72
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.25 E-value=3.5e-11 Score=63.87 Aligned_cols=48 Identities=29% Similarity=0.344 Sum_probs=41.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||++++||.+++++|+++|++|++++|+++..++..+++
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~ 54 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAY 54 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999999887665554443
No 73
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.24 E-value=5.2e-11 Score=64.85 Aligned_cols=46 Identities=28% Similarity=0.320 Sum_probs=40.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++++|||+++|||.++++.|+++| ++|++++|+++..++..+++
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l 48 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL 48 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence 47899999999999999999999999 99999999887776665544
No 74
>PRK05717 oxidoreductase; Validated
Probab=99.24 E-value=5.5e-11 Score=62.78 Aligned_cols=46 Identities=30% Similarity=0.351 Sum_probs=39.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++|+++|||++++||.++++.|+++|++|+++++++++.++..+
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~ 52 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAK 52 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 4678999999999999999999999999999999988765554433
No 75
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.24 E-value=5.2e-11 Score=62.35 Aligned_cols=48 Identities=25% Similarity=0.275 Sum_probs=40.2
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
|.....++++|||+++++|..+++.|+++|++|++++|+++..++..+
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 48 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAA 48 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 444456899999999999999999999999999999998876555443
No 76
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.24 E-value=5e-11 Score=62.15 Aligned_cols=46 Identities=28% Similarity=0.374 Sum_probs=39.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++++++|||+++++|..+++.|+++|++|++++|+++..+....
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~ 47 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAA 47 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 5677899999999999999999999999999999998776554433
No 77
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.23 E-value=4.1e-11 Score=63.52 Aligned_cols=46 Identities=15% Similarity=0.352 Sum_probs=38.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHHhhh
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVRRST 47 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~ 47 (62)
.++++|+++|||+++|||.++++.|+++|++|+++++ +++.++...
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~ 50 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIA 50 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999999999999998875 444444433
No 78
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.23 E-value=3.7e-11 Score=63.42 Aligned_cols=41 Identities=27% Similarity=0.365 Sum_probs=37.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
++++++++|||++++||.++++.|+++|++|++++|+++..
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~ 44 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD 44 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH
Confidence 57889999999999999999999999999999999987654
No 79
>PRK06398 aldose dehydrogenase; Validated
Probab=99.23 E-value=4.1e-11 Score=63.56 Aligned_cols=41 Identities=17% Similarity=0.327 Sum_probs=37.9
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
|.++++++++|||+++|||.++++.|+++|++|++++|+++
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~ 41 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP 41 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc
Confidence 67788999999999999999999999999999999998654
No 80
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.22 E-value=5.3e-11 Score=62.72 Aligned_cols=47 Identities=38% Similarity=0.517 Sum_probs=41.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++.+++..++
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~ 52 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAE 52 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 35789999999999999999999999999999999998776655443
No 81
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.22 E-value=7.4e-11 Score=62.59 Aligned_cols=50 Identities=26% Similarity=0.201 Sum_probs=40.1
Q ss_pred CCCCCCcEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCh--hHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGA--CSSLGETLCKELALSGLTVVGLARRR--HRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~r~~--~~~~~~~~~~ 50 (62)
|.++.+|+++|||+ ++|||.++++.|+++|++|++++|+. +..++..+++
T Consensus 2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~ 55 (256)
T PRK07889 2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL 55 (256)
T ss_pred cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc
Confidence 34578899999999 89999999999999999999998764 3344444433
No 82
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.22 E-value=6.8e-11 Score=62.54 Aligned_cols=48 Identities=25% Similarity=0.333 Sum_probs=41.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||+++++|.+++..|+++|++|++++|+++..++..+++
T Consensus 4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (259)
T PRK06125 4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADL 51 (259)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 467899999999999999999999999999999999887766554433
No 83
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.22 E-value=7.1e-11 Score=61.90 Aligned_cols=47 Identities=17% Similarity=0.372 Sum_probs=40.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++++++++|||++++||..+++.|+++|++|++++|+++..+...++
T Consensus 2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~ 48 (253)
T PRK08217 2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAE 48 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999987665554443
No 84
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.22 E-value=6.1e-11 Score=62.58 Aligned_cols=47 Identities=28% Similarity=0.450 Sum_probs=40.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~ 47 (62)
|..+++++++|||++++||..+++.|+++|++ |++++|++++.+...
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~ 48 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQA 48 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 56788999999999999999999999999998 999999876555433
No 85
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.21 E-value=6.6e-11 Score=62.38 Aligned_cols=42 Identities=33% Similarity=0.479 Sum_probs=38.3
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
|+++++++++|||++++||.++++.|+++|++|++++|+++.
T Consensus 1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~ 42 (252)
T PRK07856 1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE 42 (252)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 567889999999999999999999999999999999997643
No 86
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.21 E-value=6.6e-11 Score=62.92 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=35.8
Q ss_pred CCCCCCcEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGA--CSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|..+++|+++|||+ ++|||+++++.|+++|++|++++|+.
T Consensus 1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~ 42 (261)
T PRK08690 1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD 42 (261)
T ss_pred CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH
Confidence 67788999999997 67999999999999999999987753
No 87
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.21 E-value=6.4e-11 Score=62.88 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=35.0
Q ss_pred CCCCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 1 MDRWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 1 m~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
|+++++|+++|||++ +|||+++++.|+++|++|++++++
T Consensus 1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~ 41 (258)
T PRK07370 1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP 41 (258)
T ss_pred CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecC
Confidence 667889999999986 899999999999999999988754
No 88
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.21 E-value=9.7e-11 Score=61.21 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=34.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+|+++|||+++|||.++++.|+++|++|++++|+++..
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 39 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA 39 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH
Confidence 57899999999999999999999999999999976543
No 89
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.21 E-value=6.2e-11 Score=62.49 Aligned_cols=44 Identities=25% Similarity=0.493 Sum_probs=38.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+|+++|||+++|||.++++.|+++|++|++++|+++..++..++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~ 44 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLE 44 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 47899999999999999999999999999999988766555443
No 90
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.21 E-value=1.2e-10 Score=60.90 Aligned_cols=47 Identities=30% Similarity=0.350 Sum_probs=41.4
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
|.++++++++|||++++||.++++.|+++|+.|++.+++.+..++..
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~ 47 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA 47 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 67788999999999999999999999999999999888876665543
No 91
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.21 E-value=7.8e-11 Score=62.20 Aligned_cols=45 Identities=20% Similarity=0.308 Sum_probs=39.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+.+++++|||++++||.++++.|+++|+++++++|+.+..+...+
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~ 53 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVD 53 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 468999999999999999999999999999999998766554443
No 92
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.20 E-value=8.4e-11 Score=61.88 Aligned_cols=47 Identities=28% Similarity=0.427 Sum_probs=38.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL-ARRRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~ 47 (62)
|.++++++++|||++++||.++++.|+++|++|++. .|+.++.++..
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~ 48 (254)
T PRK12746 1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETI 48 (254)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 566778999999999999999999999999998775 57665544333
No 93
>PRK08264 short chain dehydrogenase; Validated
Probab=99.20 E-value=1.5e-10 Score=60.43 Aligned_cols=44 Identities=34% Similarity=0.480 Sum_probs=39.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHH
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVR 44 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~ 44 (62)
|+.+.+++++|||+++++|.++++.|+++|+ +|++++|++++.+
T Consensus 1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~ 45 (238)
T PRK08264 1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVT 45 (238)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhh
Confidence 6667889999999999999999999999999 9999999876554
No 94
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.20 E-value=8.4e-11 Score=62.12 Aligned_cols=38 Identities=34% Similarity=0.567 Sum_probs=35.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|||+++|||.++++.|+++|++|++++|++
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~ 42 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE 42 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 36789999999999999999999999999999999975
No 95
>PRK06128 oxidoreductase; Provisional
Probab=99.19 E-value=9.4e-11 Score=63.37 Aligned_cols=38 Identities=29% Similarity=0.314 Sum_probs=34.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.+.+|+++|||+++|||.++++.|+++|++|++++++.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~ 89 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPE 89 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCc
Confidence 46689999999999999999999999999999988754
No 96
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.19 E-value=7.2e-11 Score=62.59 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhH-HHhhhcCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHR-VRRSTAVP 50 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~-~~~~~~~~ 50 (62)
.+++++|||+++|||.+++++|+++| ++|++++|+++. .++..+++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l 54 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQM 54 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHH
Confidence 46889999999999999999999985 999999998765 55444433
No 97
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.19 E-value=9.9e-11 Score=63.54 Aligned_cols=48 Identities=27% Similarity=0.228 Sum_probs=39.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh-hHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR-HRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~~~ 50 (62)
++++++++|||+++|||.++++.|+++|++|++.+++. +..++..+++
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i 57 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEI 57 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHH
Confidence 47789999999999999999999999999999998753 3344444433
No 98
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.19 E-value=1.4e-10 Score=61.37 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=35.0
Q ss_pred CCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.+++|+++|||++ +|||+++++.|+++|++|++++|+.
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~ 43 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND 43 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch
Confidence 3678999999999 7999999999999999999999874
No 99
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.18 E-value=1.5e-10 Score=61.51 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=39.8
Q ss_pred CCCCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCh---hHHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRR---HRVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~---~~~~~~~~~~ 50 (62)
|.++.+|+++|||++ +|||.++++.|+++|++|++++|+. +.++++.+++
T Consensus 2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~ 56 (257)
T PRK08594 2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL 56 (257)
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc
Confidence 345789999999997 8999999999999999999997742 3445554443
No 100
>PRK09186 flagellin modification protein A; Provisional
Probab=99.18 E-value=1e-10 Score=61.54 Aligned_cols=46 Identities=22% Similarity=0.336 Sum_probs=40.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+++|+++|||++++||.++++.|+++|++|++++|+++..++..++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 47 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLES 47 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHH
Confidence 5689999999999999999999999999999999988766555433
No 101
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.18 E-value=1.1e-10 Score=61.20 Aligned_cols=44 Identities=20% Similarity=0.389 Sum_probs=38.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
+++++++|||++++||.++++.|+++|++|++++|+++..+++.
T Consensus 1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~ 44 (250)
T TIGR03206 1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVA 44 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHH
Confidence 46789999999999999999999999999999999877655443
No 102
>PRK06182 short chain dehydrogenase; Validated
Probab=99.18 E-value=2.2e-10 Score=61.02 Aligned_cols=43 Identities=37% Similarity=0.569 Sum_probs=38.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++++++|||+++|||.++++.|+++|++|++++|+++.+++..
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~ 44 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA 44 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 5689999999999999999999999999999999887765543
No 103
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2.2e-10 Score=61.29 Aligned_cols=43 Identities=26% Similarity=0.427 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++++++|||+++|||.++++.|+++|++|++++|+++.++++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~ 45 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE 45 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 4688999999999999999999999999999999887665543
No 104
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.17 E-value=1.7e-10 Score=60.51 Aligned_cols=47 Identities=23% Similarity=0.352 Sum_probs=38.1
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHHhhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVRRST 47 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~ 47 (62)
|..+.+++++|||++++||.+++++|+++|++|++..+ +++..++..
T Consensus 1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~ 48 (247)
T PRK12935 1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV 48 (247)
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH
Confidence 56678899999999999999999999999999987654 444444443
No 105
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.17 E-value=1.1e-10 Score=68.15 Aligned_cols=48 Identities=31% Similarity=0.435 Sum_probs=41.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++++++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 415 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEI 415 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 356889999999999999999999999999999999987766655443
No 106
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.7e-10 Score=60.56 Aligned_cols=43 Identities=35% Similarity=0.507 Sum_probs=38.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++++|||+++|||.++++.|+++|++|++.+|++++.++..+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~ 44 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKA 44 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 5789999999999999999999999999999998877655543
No 107
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.16 E-value=1.3e-10 Score=63.41 Aligned_cols=44 Identities=16% Similarity=0.218 Sum_probs=37.2
Q ss_pred CCCCcEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 3 RWIGRIVLVTGA--CSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 3 ~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++++|+++|||+ ++|||.++++.|++.|++|++ .|+.+.+++..
T Consensus 6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~ 51 (303)
T PLN02730 6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFE 51 (303)
T ss_pred CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHH
Confidence 478999999999 799999999999999999988 66655554443
No 108
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.16 E-value=1.6e-10 Score=61.23 Aligned_cols=43 Identities=26% Similarity=0.315 Sum_probs=37.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++|||+++|||.++++.|+++|++|++++|+++.+++..+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 44 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKEL 44 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHH
Confidence 6899999999999999999999999999999987766555443
No 109
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.16 E-value=2.9e-10 Score=61.04 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=34.8
Q ss_pred CCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.+.+|+++|||++ +|||+++++.|+++|++|++++|+.
T Consensus 2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~ 41 (274)
T PRK08415 2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE 41 (274)
T ss_pred ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH
Confidence 3678999999997 7999999999999999999999975
No 110
>PRK07985 oxidoreductase; Provisional
Probab=99.16 E-value=1.6e-10 Score=62.43 Aligned_cols=37 Identities=30% Similarity=0.237 Sum_probs=33.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
++++++++|||+++|||.++++.|+++|++|++.+++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 3667999999999999999999999999999998764
No 111
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.2e-10 Score=59.82 Aligned_cols=43 Identities=28% Similarity=0.349 Sum_probs=37.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++|||+++|||+++++.|+++|++|++++|+++++++..+++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~ 44 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL 44 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc
Confidence 4899999999999999999999999999999988776655544
No 112
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.15 E-value=1.6e-10 Score=60.88 Aligned_cols=44 Identities=30% Similarity=0.456 Sum_probs=35.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cChhHHHhhh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLA-RRRHRVRRST 47 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-r~~~~~~~~~ 47 (62)
+++|+++|||+++|||.++++.|++.|++|++.+ ++.+..++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~ 46 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV 46 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 4679999999999999999999999999998875 4444444333
No 113
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.15 E-value=1.7e-10 Score=60.59 Aligned_cols=38 Identities=37% Similarity=0.591 Sum_probs=35.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++|+++|||++++||.++++.|+++|++|++++|++
T Consensus 2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~ 39 (248)
T TIGR01832 2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE 39 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch
Confidence 47889999999999999999999999999999999865
No 114
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.15 E-value=1.1e-10 Score=58.13 Aligned_cols=45 Identities=31% Similarity=0.420 Sum_probs=36.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC--hhHHHhhhcCCC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSG-LTVVGLARR--RHRVRRSTAVPK 51 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~--~~~~~~~~~~~~ 51 (62)
|+++|||+++|||.++++.|+++| ..|++++|+ .+..+++..+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~ 48 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK 48 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc
Confidence 689999999999999999999995 578888988 455555544443
No 115
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.15 E-value=2.1e-10 Score=59.94 Aligned_cols=46 Identities=24% Similarity=0.401 Sum_probs=39.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecChhHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGL-ARRRHRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~r~~~~~~~~~~ 48 (62)
++++++++|||++++||..+++.|+++|++|+++ +|+++..+...+
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~ 48 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLE 48 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 4678899999999999999999999999999998 888766544433
No 116
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.2e-10 Score=60.51 Aligned_cols=46 Identities=24% Similarity=0.286 Sum_probs=40.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
.++++++++|||+++++|..+++.|+++|++|++++|+++..++..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~ 52 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA 52 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3567899999999999999999999999999999999876655443
No 117
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.5e-10 Score=60.58 Aligned_cols=37 Identities=35% Similarity=0.719 Sum_probs=34.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++++++|||+++|||.++++.|+++|++|++++|++
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~ 48 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSK 48 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCc
Confidence 5689999999999999999999999999999999876
No 118
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.14 E-value=1.8e-10 Score=60.46 Aligned_cols=45 Identities=27% Similarity=0.519 Sum_probs=36.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEE-EecChhHHHhhhc
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVG-LARRRHRVRRSTA 48 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~-~~r~~~~~~~~~~ 48 (62)
+.+++++|||++++||.++++.|+++|++|++ ..|+.+..++..+
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~ 47 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAE 47 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 46789999999999999999999999999876 4676655544443
No 119
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.14 E-value=2.6e-10 Score=61.54 Aligned_cols=38 Identities=21% Similarity=0.359 Sum_probs=35.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++++++|||++++||.+++++|+++|++|++++|+.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~ 80 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDE 80 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 45678999999999999999999999999999999875
No 120
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.14 E-value=3.2e-10 Score=60.18 Aligned_cols=39 Identities=15% Similarity=0.120 Sum_probs=35.3
Q ss_pred CCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++++|+++|||++ +|||.++++.|+++|++|++++|+++
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~ 47 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDK 47 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChh
Confidence 4678999999998 59999999999999999999999753
No 121
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.6e-10 Score=59.36 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=37.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++|||+++|||.++++.|+++|++|++++|+++..++..+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 579999999999999999999999999999998877665543
No 122
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.13 E-value=2.7e-10 Score=60.04 Aligned_cols=41 Identities=27% Similarity=0.374 Sum_probs=36.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++++|||++++||.++++.|+++|++|++++|+++..++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~ 42 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTAL 42 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 56899999999999999999999999999999987655444
No 123
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.8e-10 Score=59.45 Aligned_cols=41 Identities=27% Similarity=0.406 Sum_probs=37.0
Q ss_pred CCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 2 ~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+++.+++++|||++++||.++++.|+++|++|++++|+++.
T Consensus 11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~ 51 (255)
T PRK06841 11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV 51 (255)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 34678999999999999999999999999999999998653
No 124
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.13 E-value=3.2e-10 Score=60.52 Aligned_cols=43 Identities=30% Similarity=0.352 Sum_probs=37.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
+++.++|||+++++|.++++.|+++|++|++++|+++..+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 44 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLL 44 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 5688999999999999999999999999999999877655443
No 125
>PRK05855 short chain dehydrogenase; Validated
Probab=99.13 E-value=2.6e-10 Score=65.38 Aligned_cols=47 Identities=28% Similarity=0.404 Sum_probs=40.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+.+++++|||+++|||.++++.|+++|++|++++|+.+.+++..+++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~ 359 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELI 359 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 56789999999999999999999999999999999987766655444
No 126
>PRK06484 short chain dehydrogenase; Validated
Probab=99.12 E-value=3.6e-10 Score=64.65 Aligned_cols=47 Identities=34% Similarity=0.475 Sum_probs=41.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.++|+++|||+++|||.++++.|+++|++|++++|+.+.+++..+++
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL 49 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 56899999999999999999999999999999999888776665544
No 127
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=4.3e-10 Score=58.69 Aligned_cols=44 Identities=23% Similarity=0.314 Sum_probs=39.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++++++++|||+++++|..+++.|+++|++|++++|+++..+..
T Consensus 2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (238)
T PRK05786 2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRM 45 (238)
T ss_pred CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46789999999999999999999999999999999988766544
No 128
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.12 E-value=3.9e-10 Score=59.74 Aligned_cols=38 Identities=29% Similarity=0.536 Sum_probs=34.5
Q ss_pred CCCCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEec
Q psy6647 1 MDRWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 1 m~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r 38 (62)
|.++++|+++|||++ +|||.++++.|+++|++|+++++
T Consensus 1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~ 40 (256)
T PRK12859 1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYW 40 (256)
T ss_pred CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEec
Confidence 677899999999998 49999999999999999998754
No 129
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.12 E-value=3.4e-10 Score=59.94 Aligned_cols=38 Identities=24% Similarity=0.369 Sum_probs=34.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++++++|||++++||.++++.|+++|++|+++.|+.
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46789999999999999999999999999999988854
No 130
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.7e-10 Score=60.61 Aligned_cols=43 Identities=21% Similarity=0.262 Sum_probs=37.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++++|||++++||.++++.|+++|++|++++|+.+..++..++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKL 43 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4689999999999999999999999999999988776655443
No 131
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.8e-10 Score=59.69 Aligned_cols=44 Identities=20% Similarity=0.241 Sum_probs=38.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
|+++|||++++||.++++.|+++|++|++++|+++..++..+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 45 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL 45 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHh
Confidence 57999999999999999999999999999999888776665443
No 132
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4.8e-10 Score=59.92 Aligned_cols=44 Identities=34% Similarity=0.336 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
...++++|||++++||.++++.|+++|++|++++|+.+..++..
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 51 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELV 51 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34578999999999999999999999999999999876655443
No 133
>KOG1200|consensus
Probab=99.12 E-value=3e-10 Score=59.13 Aligned_cols=49 Identities=18% Similarity=0.220 Sum_probs=44.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
++.+.+++||+++|||++++..|+..|++|++.+++...++.....++.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g 60 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG 60 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC
Confidence 5678999999999999999999999999999999998888877777754
No 134
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.11 E-value=6.9e-10 Score=58.63 Aligned_cols=38 Identities=24% Similarity=0.490 Sum_probs=34.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|||+++|||.++++.|+++|++|++.+++.
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA 41 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 36789999999999999999999999999998887654
No 135
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.11 E-value=3.6e-10 Score=59.70 Aligned_cols=43 Identities=23% Similarity=0.382 Sum_probs=37.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++++|||++++||.++++.|+++|++|++++|+.+..++..+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~ 44 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQ 44 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 6789999999999999999999999999999998766554443
No 136
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.11 E-value=3.8e-10 Score=59.03 Aligned_cols=38 Identities=34% Similarity=0.459 Sum_probs=34.5
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
|.++++++++|||++++||.++++.|+++|++|+++++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 55677899999999999999999999999999998765
No 137
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.11 E-value=3.6e-10 Score=59.29 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=36.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++|||++++||.++++.|+++|++|++++|+++..+...+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~ 43 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLAD 43 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 579999999999999999999999999999998876655443
No 138
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.10 E-value=4.1e-10 Score=60.30 Aligned_cols=38 Identities=21% Similarity=0.244 Sum_probs=34.8
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 4 WIGRIVLVTGACS--SLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+++|+++|||+++ |||+++++.|+++|++|++++|+..
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~ 44 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA 44 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH
Confidence 6789999999996 9999999999999999999998753
No 139
>PRK05599 hypothetical protein; Provisional
Probab=99.10 E-value=3.2e-10 Score=59.86 Aligned_cols=43 Identities=23% Similarity=0.255 Sum_probs=37.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++++|||+++|||.++++.|+ +|++|++++|+++++++..+++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l 43 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDL 43 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 468999999999999999999 5999999999988877665554
No 140
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.10 E-value=5.3e-10 Score=58.50 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=34.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++++++|||++++||.++++.|+++|++++++.++.
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 46789999999999999999999999999998887754
No 141
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.09 E-value=3.2e-10 Score=59.60 Aligned_cols=46 Identities=30% Similarity=0.383 Sum_probs=40.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+++++++|||++++||.++++.|+++|++|++++|+.+..++..++
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~ 55 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDE 55 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Confidence 5789999999999999999999999999999999988765554433
No 142
>PRK06484 short chain dehydrogenase; Validated
Probab=99.09 E-value=4.8e-10 Score=64.15 Aligned_cols=46 Identities=17% Similarity=0.341 Sum_probs=41.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.+|+++|||+++|||.++++.|+++|++|++++|+++.++++.+++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 313 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL 313 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 5789999999999999999999999999999999988777666544
No 143
>PRK12743 oxidoreductase; Provisional
Probab=99.09 E-value=4e-10 Score=59.58 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHHhhh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVRRST 47 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~ 47 (62)
+++++|||++++||.++++.|+++|++|+++++ +.+..+...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~ 44 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETA 44 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHH
Confidence 578999999999999999999999999998865 444444433
No 144
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.09 E-value=4.6e-10 Score=59.69 Aligned_cols=37 Identities=16% Similarity=0.141 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGACS--SLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++|+++|||+++ |||+++++.|+++|++|++.+|++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~ 44 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE 44 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch
Confidence 6789999999997 999999999999999999998874
No 145
>KOG1502|consensus
Probab=99.09 E-value=7.2e-10 Score=60.96 Aligned_cols=44 Identities=36% Similarity=0.413 Sum_probs=38.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
|....++.+.|||++|.||.+++..|+++||.|..+.|++++.+
T Consensus 1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k 44 (327)
T KOG1502|consen 1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEK 44 (327)
T ss_pred CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhh
Confidence 44446789999999999999999999999999999999887643
No 146
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.09 E-value=6.4e-10 Score=59.47 Aligned_cols=44 Identities=27% Similarity=0.328 Sum_probs=38.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
.+++++|||++++||.++++.|+++|++|++++|+++..+.+.+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~ 46 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA 46 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh
Confidence 46889999999999999999999999999999998876655443
No 147
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.09 E-value=4.9e-10 Score=59.70 Aligned_cols=45 Identities=24% Similarity=0.409 Sum_probs=39.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++.+++++|||++++||.++++.|+++|++|++++|+++..+...
T Consensus 4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 48 (276)
T PRK05875 4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAA 48 (276)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 367899999999999999999999999999999999876654443
No 148
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.09 E-value=5.5e-10 Score=59.19 Aligned_cols=45 Identities=24% Similarity=0.356 Sum_probs=38.5
Q ss_pred CCCcEEEEEcCCC-hHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 4 WIGRIVLVTGACS-SLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 4 ~~~~~~~itG~~~-gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+.+++++|||+++ |||.++++.|+++|++|++++|++++.++..+
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~ 60 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETAD 60 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 4579999999985 99999999999999999999998776655444
No 149
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.08 E-value=7e-10 Score=58.24 Aligned_cols=39 Identities=31% Similarity=0.427 Sum_probs=35.1
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
|+++.+++++|||++++||.+++++|+++|+++++..++
T Consensus 1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~ 39 (252)
T PRK06077 1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKK 39 (252)
T ss_pred CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 667788999999999999999999999999998887653
No 150
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.08 E-value=7.2e-10 Score=58.65 Aligned_cols=43 Identities=30% Similarity=0.387 Sum_probs=35.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-hhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR-RHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~-~~~~~~ 45 (62)
...+++++|||++++||.++++.|+++|++|++++++ .+..+.
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~ 49 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEA 49 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH
Confidence 3567899999999999999999999999999887764 344433
No 151
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.08 E-value=5.9e-10 Score=59.00 Aligned_cols=43 Identities=33% Similarity=0.538 Sum_probs=37.0
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++++|||++++||..+++.|+++|++|++++|+++..++..+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~ 43 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQ 43 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3679999999999999999999999999999998766554443
No 152
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.08 E-value=8e-10 Score=59.01 Aligned_cols=44 Identities=20% Similarity=0.300 Sum_probs=38.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++++|||++++||.++++.|+++|++|++++|+++.+++..+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 45 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAE 45 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 46899999999999999999999999999999998876655444
No 153
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.08 E-value=5.1e-10 Score=58.79 Aligned_cols=43 Identities=30% Similarity=0.375 Sum_probs=37.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++++|||+++++|..+++.|+++|++|++++|+++..+...+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~ 43 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAK 43 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3679999999999999999999999999999998776554443
No 154
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.07 E-value=1e-09 Score=58.79 Aligned_cols=37 Identities=16% Similarity=0.162 Sum_probs=33.6
Q ss_pred CCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+.+|+++|||++ +|||+++++.|+++|++|++++|++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~ 46 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD 46 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch
Confidence 568999999997 8999999999999999999998863
No 155
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.07 E-value=8.4e-10 Score=57.45 Aligned_cols=39 Identities=28% Similarity=0.359 Sum_probs=35.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++++|||+++++|.++++.|+++|++|++++|+++..+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~ 40 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTA 40 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHH
Confidence 579999999999999999999999999999998765443
No 156
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.1e-09 Score=57.81 Aligned_cols=44 Identities=25% Similarity=0.369 Sum_probs=38.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+++++|||++++||.+++..|+++|++|++++|+++..+...+.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~ 45 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADA 45 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 57899999999999999999999999999999988766555443
No 157
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.06 E-value=1.2e-09 Score=57.41 Aligned_cols=45 Identities=24% Similarity=0.304 Sum_probs=36.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHHhhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVRRST 47 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~~~~ 47 (62)
++++++++|||++++||.++++.|+++|++|++.++ +++..+...
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~ 47 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALA 47 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 357899999999999999999999999999988765 444444433
No 158
>PRK09135 pteridine reductase; Provisional
Probab=99.06 E-value=1.2e-09 Score=57.23 Aligned_cols=40 Identities=23% Similarity=0.357 Sum_probs=36.2
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|+.+++++++|||+++++|+++++.|+++|++|++++|+.
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 5556789999999999999999999999999999999853
No 159
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.06 E-value=8.8e-10 Score=58.67 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=34.4
Q ss_pred CCCCCCcEEEEEcC--CChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 1 MDRWIGRIVLVTGA--CSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 1 m~~~~~~~~~itG~--~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
|..+.+|+++|||+ ++|||.++++.|+++|++|+++++.
T Consensus 1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~ 41 (260)
T PRK06997 1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVG 41 (260)
T ss_pred CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccc
Confidence 55678899999996 6899999999999999999998653
No 160
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.9e-10 Score=59.47 Aligned_cols=43 Identities=16% Similarity=0.356 Sum_probs=35.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+|+++|||+ +|||.++++.|+ +|++|++++|+++.+++..+++
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l 44 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTL 44 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHH
Confidence 578999998 699999999996 7999999999877666554443
No 161
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.05 E-value=9.6e-10 Score=58.11 Aligned_cols=39 Identities=33% Similarity=0.452 Sum_probs=35.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++++++++|||+++|||.++++.|+++|++|++++|+++
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~ 44 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP 44 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh
Confidence 467899999999999999999999999999999999754
No 162
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.05 E-value=6.6e-10 Score=58.94 Aligned_cols=40 Identities=33% Similarity=0.493 Sum_probs=35.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
++.+++++|||+++|||.++++.|+++|++|+++++++..
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~ 45 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGD 45 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3568999999999999999999999999999999887543
No 163
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.5e-09 Score=57.90 Aligned_cols=40 Identities=30% Similarity=0.491 Sum_probs=35.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
|+++|||+++|||.++++.|+++|++|++++|+++..+..
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 41 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL 41 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5799999999999999999999999999999987665543
No 164
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.04 E-value=1.3e-09 Score=57.46 Aligned_cols=42 Identities=33% Similarity=0.563 Sum_probs=36.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++++|||+++++|.++++.|+++|++|++++|+++.++...+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD 42 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 368999999999999999999999999999998876665543
No 165
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.04 E-value=1.2e-09 Score=57.00 Aligned_cols=40 Identities=40% Similarity=0.564 Sum_probs=35.2
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|..++.++++|||+++++|..++..|+++|++|++..++.
T Consensus 1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~ 40 (249)
T PRK12825 1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSD 40 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6667778999999999999999999999999988866654
No 166
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.2e-09 Score=57.81 Aligned_cols=36 Identities=28% Similarity=0.569 Sum_probs=31.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
++++++++|||++++||.++++.|+++|++|+++.+
T Consensus 5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 357899999999999999999999999999766654
No 167
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2e-09 Score=57.46 Aligned_cols=43 Identities=26% Similarity=0.370 Sum_probs=37.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
.++++|||++++||.+++..|+++|++|++++|+++..+...+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~ 44 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKA 44 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4689999999999999999999999999999998876665543
No 168
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.03 E-value=1.5e-09 Score=56.64 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=34.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++.+++++|||+++++|.++++.|+++|++|++..++.+
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 357789999999999999999999999999988887654
No 169
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.03 E-value=1.2e-09 Score=57.51 Aligned_cols=42 Identities=21% Similarity=0.435 Sum_probs=36.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
|+++|||++++||.++++.|+++|++|++++|+++..++...
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~ 42 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAK 42 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 579999999999999999999999999999998765554443
No 170
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.02 E-value=1.1e-09 Score=58.02 Aligned_cols=43 Identities=37% Similarity=0.473 Sum_probs=37.3
Q ss_pred EEEEEcCCChHHHHHHHHHHh----CCCeEEEEecChhHHHhhhcCC
Q psy6647 8 IVLVTGACSSLGETLCKELAL----SGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~----~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++|||+++|||.++++.|++ +|++|++++|+++.+++..+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l 48 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI 48 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHH
Confidence 589999999999999999997 7999999999988776665544
No 171
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.02 E-value=1.4e-09 Score=57.23 Aligned_cols=35 Identities=26% Similarity=0.385 Sum_probs=32.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.|+++|||++++||.++++.|+++|++|++++|+.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~ 36 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPD 36 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCc
Confidence 47899999999999999999999999999999864
No 172
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.01 E-value=1.4e-09 Score=57.07 Aligned_cols=34 Identities=32% Similarity=0.575 Sum_probs=30.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLA 37 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~ 37 (62)
+++|+++|||++++||.++++.|+++|++|++..
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~ 34 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGC 34 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEc
Confidence 3578999999999999999999999999988754
No 173
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.00 E-value=1.5e-09 Score=56.66 Aligned_cols=39 Identities=26% Similarity=0.526 Sum_probs=35.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++++++++|||++++||.++++.|+++|++|++++|++.
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~ 40 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK 40 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 477899999999999999999999999999999998653
No 174
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.00 E-value=3e-09 Score=55.93 Aligned_cols=40 Identities=28% Similarity=0.570 Sum_probs=34.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh-hHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR-HRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~-~~~~~~ 46 (62)
|+++|||++++||.++++.|+++|++|++++|++ +..++.
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~ 42 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL 42 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH
Confidence 5799999999999999999999999999999976 444433
No 175
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.00 E-value=1.8e-09 Score=57.06 Aligned_cols=38 Identities=29% Similarity=0.487 Sum_probs=34.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|||++++||.++++.|+++|++|++.++.+
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~ 44 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE 44 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc
Confidence 36789999999999999999999999999999887754
No 176
>PRK06179 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.1e-09 Score=57.12 Aligned_cols=39 Identities=36% Similarity=0.572 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
++++++|||++++||.++++.|+++|++|++.+|+++..
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~ 41 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA 41 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc
Confidence 467899999999999999999999999999999986543
No 177
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.5e-09 Score=57.87 Aligned_cols=43 Identities=26% Similarity=0.325 Sum_probs=36.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++++|||+++|||.++++.|+++|++|++++|+++..++..++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~ 43 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVAD 43 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 4689999999999999999999999999999987765554433
No 178
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.98 E-value=2.7e-09 Score=56.41 Aligned_cols=37 Identities=30% Similarity=0.538 Sum_probs=33.8
Q ss_pred CCCCcEEEEEcCCC--hHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACS--SLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~--gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.+++++++|||+++ |||..+++.|+++|++|++++|+
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 46789999999984 89999999999999999999987
No 179
>PRK08017 oxidoreductase; Provisional
Probab=98.97 E-value=5.4e-09 Score=55.06 Aligned_cols=40 Identities=33% Similarity=0.470 Sum_probs=35.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++++|||++++||.++++.|+++|++|++++|++++.+..
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~ 42 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM 42 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH
Confidence 6799999999999999999999999999999988765543
No 180
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.97 E-value=3.3e-09 Score=61.99 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=39.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
..+++++|||++|+||.+++++|+++|++|++++|+.+.++.+.+
T Consensus 78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~ 122 (576)
T PLN03209 78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQ 122 (576)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 467899999999999999999999999999999999877665443
No 181
>PLN00015 protochlorophyllide reductase
Probab=98.97 E-value=2e-09 Score=58.51 Aligned_cols=41 Identities=34% Similarity=0.424 Sum_probs=35.7
Q ss_pred EEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 10 LVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 10 ~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
+|||+++|||.++++.|+++| ++|++++|+++..++..+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l 42 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA 42 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 589999999999999999999 99999999887766655544
No 182
>PRK08324 short chain dehydrogenase; Validated
Probab=98.96 E-value=3.3e-09 Score=62.80 Aligned_cols=46 Identities=30% Similarity=0.408 Sum_probs=40.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+.+++++|||++++||..+++.|+++|++|++++|+++..+...++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~ 465 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAE 465 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH
Confidence 4679999999999999999999999999999999998776655443
No 183
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.96 E-value=3.8e-09 Score=59.72 Aligned_cols=41 Identities=39% Similarity=0.588 Sum_probs=37.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
+++|+++|||+++|||.++++.|+++|++|++++|+++..+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~ 216 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKIT 216 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 56899999999999999999999999999999999876554
No 184
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.96 E-value=2.4e-09 Score=63.48 Aligned_cols=45 Identities=24% Similarity=0.318 Sum_probs=39.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+.+|+++|||+++|||.++++.|+++|++|++++|+.+..+...+
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~ 456 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAA 456 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence 568999999999999999999999999999999998776655443
No 185
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.96 E-value=3.2e-09 Score=55.74 Aligned_cols=41 Identities=24% Similarity=0.283 Sum_probs=33.4
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cChhHHHhh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA-RRRHRVRRS 46 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-r~~~~~~~~ 46 (62)
.++++|||++++||..+++.|+++|++|+++. ++++..+..
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~ 43 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEET 43 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH
Confidence 36899999999999999999999999998765 454444433
No 186
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.96 E-value=4.4e-09 Score=57.36 Aligned_cols=37 Identities=24% Similarity=0.330 Sum_probs=33.8
Q ss_pred CCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
++.+|+++|||++ +|||+++++.|+++|++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 5789999999996 999999999999999999998754
No 187
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.95 E-value=3.1e-09 Score=55.47 Aligned_cols=38 Identities=34% Similarity=0.613 Sum_probs=32.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHH
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVR 44 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~ 44 (62)
|+++|||+++++|..+++.|+++|++|+++.| +++..+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~ 39 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAE 39 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHH
Confidence 57999999999999999999999999999888 444433
No 188
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.95 E-value=3.2e-09 Score=55.69 Aligned_cols=39 Identities=21% Similarity=0.264 Sum_probs=32.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec-ChhHHH
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR-RRHRVR 44 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r-~~~~~~ 44 (62)
+++++|||++++||.++++.|+++|++|++.++ +++..+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~ 41 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAE 41 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHH
Confidence 578999999999999999999999999988874 334333
No 189
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.93 E-value=3.3e-09 Score=58.40 Aligned_cols=39 Identities=33% Similarity=0.370 Sum_probs=35.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+++++++|||++|+||.++++.|+++|++|++++|++..
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~ 40 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPT 40 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 467899999999999999999999999999999987643
No 190
>PLN02583 cinnamoyl-CoA reductase
Probab=98.93 E-value=9.9e-09 Score=55.59 Aligned_cols=37 Identities=27% Similarity=0.223 Sum_probs=33.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
-.+++++|||++|+||.+++..|+++|++|+++.|+.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 3568899999999999999999999999999999853
No 191
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.92 E-value=8.1e-09 Score=58.51 Aligned_cols=36 Identities=36% Similarity=0.543 Sum_probs=33.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+.+++++|||++++||..+++.|+++|++|++++++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~ 243 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVP 243 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457899999999999999999999999999999884
No 192
>KOG1209|consensus
Probab=98.92 E-value=5.4e-09 Score=55.24 Aligned_cols=45 Identities=31% Similarity=0.404 Sum_probs=37.9
Q ss_pred CCcEEEEEcCC-ChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 5 IGRIVLVTGAC-SSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 5 ~~~~~~itG~~-~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
..+.++|||++ ||||.++++.|.++|+.|+.+.|+.++..++...
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~ 51 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ 51 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh
Confidence 46789999876 7999999999999999999999987776655533
No 193
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.91 E-value=7.4e-09 Score=54.35 Aligned_cols=34 Identities=41% Similarity=0.725 Sum_probs=31.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+++|||++++||.++++.|+++|++|++++|+.+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~ 36 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH 36 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc
Confidence 6999999999999999999999999999998754
No 194
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.91 E-value=9.6e-09 Score=53.41 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=35.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++++|||++++||.++++.|+++|++|++++|+++..+++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~ 41 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL 41 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 5799999999999999999999999999999987665543
No 195
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.90 E-value=7.4e-09 Score=54.45 Aligned_cols=38 Identities=26% Similarity=0.482 Sum_probs=35.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|||++++||..+++.|+++|++|++++|+.
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 46789999999999999999999999999999999865
No 196
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.90 E-value=7.1e-09 Score=54.54 Aligned_cols=39 Identities=41% Similarity=0.612 Sum_probs=34.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++.+++++|||+++|||+++++.|+++|++|+++.++.+
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~ 40 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSE 40 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc
Confidence 467899999999999999999999999999888887644
No 197
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.89 E-value=6.7e-09 Score=54.09 Aligned_cols=37 Identities=43% Similarity=0.547 Sum_probs=34.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
.+++++|||+++++|..+++.|+++|++|++++|+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~ 38 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI 38 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4688999999999999999999999999999999754
No 198
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.89 E-value=9.9e-09 Score=53.16 Aligned_cols=40 Identities=28% Similarity=0.382 Sum_probs=35.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.++++|||+++++|..+++.|+++ ++|++++|+++..++.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~ 42 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDEL 42 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHH
Confidence 478999999999999999999999 9999999987665443
No 199
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.89 E-value=8e-09 Score=56.24 Aligned_cols=38 Identities=29% Similarity=0.389 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
.+++++|||++|+||.++++.|+++|++|++++|+++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~ 41 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKD 41 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 47899999999999999999999999999998887653
No 200
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.88 E-value=1.6e-08 Score=52.85 Aligned_cols=35 Identities=31% Similarity=0.454 Sum_probs=32.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.++++|||+++++|.++++.|+++|++|++++|++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~ 36 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSG 36 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCc
Confidence 36899999999999999999999999999999974
No 201
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=98.87 E-value=1.9e-08 Score=55.49 Aligned_cols=41 Identities=29% Similarity=0.242 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+++++|||++|+||.++++.|+++|++|++++|+.+..+.
T Consensus 9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~ 49 (353)
T PLN02896 9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLH 49 (353)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 46789999999999999999999999999999987654443
No 202
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.87 E-value=8.2e-09 Score=54.04 Aligned_cols=40 Identities=30% Similarity=0.356 Sum_probs=32.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEE-ecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGL-ARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~-~r~~~~~~~~ 46 (62)
++++|||++++||.++++.|+++|++|++. .|+++..++.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~ 42 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEV 42 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHH
Confidence 579999999999999999999999999874 5665544433
No 203
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.87 E-value=8.4e-09 Score=56.55 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=35.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++++++++|||++|+||.++++.|+++|++|++++|+++
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 567899999999999999999999999999999988643
No 204
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.86 E-value=1.6e-08 Score=55.43 Aligned_cols=40 Identities=18% Similarity=0.315 Sum_probs=34.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG--LTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~~~ 43 (62)
+++++++|||++|+||.++++.|+++| ++|++.+|+....
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~ 43 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ 43 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH
Confidence 468899999999999999999999886 7899999876543
No 205
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.86 E-value=8e-09 Score=55.01 Aligned_cols=42 Identities=26% Similarity=0.308 Sum_probs=34.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC-hhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARR-RHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~ 48 (62)
++++|||+++|||.++++.|+++|++|++++++ ++..+...+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~ 44 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAA 44 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHH
Confidence 579999999999999999999999999998654 444444433
No 206
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.85 E-value=8e-09 Score=54.01 Aligned_cols=40 Identities=25% Similarity=0.390 Sum_probs=32.4
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCh-hHHHhhhc
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRR-HRVRRSTA 48 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~ 48 (62)
++|||++++||.++++.|+++|++|+++++.. +..+...+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~ 41 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVS 41 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 48999999999999999999999999988753 34444433
No 207
>PLN02686 cinnamoyl-CoA reductase
Probab=98.85 E-value=1.9e-08 Score=56.05 Aligned_cols=42 Identities=26% Similarity=0.255 Sum_probs=36.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
..++++++|||++|+||.++++.|+++|++|+++.|+.+..+
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~ 91 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE 91 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 356789999999999999999999999999998888765443
No 208
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1e-08 Score=53.37 Aligned_cols=39 Identities=31% Similarity=0.471 Sum_probs=34.2
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 10 LVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 10 ~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+|||++++||..+++.|+++|++|++++|+++..+...+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 39 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAAR 39 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 589999999999999999999999999998776655444
No 209
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=98.82 E-value=2.2e-08 Score=54.56 Aligned_cols=39 Identities=33% Similarity=0.348 Sum_probs=34.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
..+++++|||++|+||.++++.|+++|++|+++.|+...
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTD 41 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 467899999999999999999999999999988887643
No 210
>KOG1207|consensus
Probab=98.82 E-value=2.3e-08 Score=51.57 Aligned_cols=50 Identities=30% Similarity=0.405 Sum_probs=45.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
++.|+.+++||+..|||++++..|+..|+.|+.+.|+++++..+..+.+.
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~ 53 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPS 53 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCc
Confidence 35789999999999999999999999999999999999999888877654
No 211
>PRK07069 short chain dehydrogenase; Validated
Probab=98.81 E-value=1.3e-08 Score=53.39 Aligned_cols=40 Identities=23% Similarity=0.320 Sum_probs=34.2
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-hhHHHhhhc
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARR-RHRVRRSTA 48 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~ 48 (62)
++|||++++||.++++.|+++|++|++++|+ ++.+++..+
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~ 42 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAA 42 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH
Confidence 7999999999999999999999999999997 555544443
No 212
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=98.80 E-value=1.8e-08 Score=54.71 Aligned_cols=37 Identities=35% Similarity=0.409 Sum_probs=33.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++++++|||++|+||.+++++|+++|++|++++|+.+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~ 39 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN 39 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 4688999999999999999999999999999988754
No 213
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.80 E-value=4.9e-08 Score=51.74 Aligned_cols=42 Identities=21% Similarity=0.345 Sum_probs=36.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
..+++++|||++|++|..++..|+++|++|+++.|+++....
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 56 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKT 56 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHH
Confidence 346889999999999999999999999999999998765443
No 214
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.80 E-value=2.6e-08 Score=54.62 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=34.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+.+++++|||++|+||.++++.|+++|++|+++.|+.+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~ 44 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE 44 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 56789999999999999999999999999988888654
No 215
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.79 E-value=2e-08 Score=57.20 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=32.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
+++++++||||+|+||.+++++|+++|++|+++++
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~ 79 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDN 79 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEec
Confidence 56789999999999999999999999999999874
No 216
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.77 E-value=2.3e-08 Score=54.97 Aligned_cols=34 Identities=38% Similarity=0.511 Sum_probs=31.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|+++|||++|+||.+++++|+.+|++|++++|++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~ 34 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRS 34 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCC
Confidence 5799999999999999999999999999999865
No 217
>PLN02650 dihydroflavonol-4-reductase
Probab=98.77 E-value=3e-08 Score=54.65 Aligned_cols=39 Identities=33% Similarity=0.313 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
.+++++|||++|+||.++++.|+++|++|++++|+.+..
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~ 42 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV 42 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh
Confidence 467899999999999999999999999999998876543
No 218
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.75 E-value=5.7e-08 Score=52.85 Aligned_cols=47 Identities=17% Similarity=0.226 Sum_probs=38.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecCh---hHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRR---HRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~---~~~~~~~~~~ 50 (62)
.+++++++|+|+ ||+|++++..|+..|++ |++++|++ ++++++.+++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 356789999999 69999999999999986 99999986 5565555444
No 219
>KOG1210|consensus
Probab=98.74 E-value=4e-08 Score=53.98 Aligned_cols=47 Identities=30% Similarity=0.337 Sum_probs=42.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCce
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVE 53 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~ 53 (62)
+.++|||+++|+|++++..+..+|++|.++.|+...+.+++++++..
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~ 80 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELL 80 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhh
Confidence 68999999999999999999999999999999999888888777543
No 220
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.72 E-value=1.1e-07 Score=48.13 Aligned_cols=37 Identities=32% Similarity=0.474 Sum_probs=34.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++|+|++|.+|..+++.|+++|++|.++.|++++.++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~ 37 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED 37 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc
Confidence 6899999999999999999999999999999887665
No 221
>PLN02214 cinnamoyl-CoA reductase
Probab=98.72 E-value=6.6e-08 Score=53.37 Aligned_cols=39 Identities=33% Similarity=0.341 Sum_probs=35.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
.++++++|||++|+||.++++.|+++|++|++++|+.+.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 456889999999999999999999999999999987653
No 222
>PLN02240 UDP-glucose 4-epimerase
Probab=98.71 E-value=6.7e-08 Score=53.08 Aligned_cols=37 Identities=32% Similarity=0.521 Sum_probs=33.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.+++++++|||++|++|.++++.|+++|++|+++++.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 3667899999999999999999999999999999864
No 223
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.71 E-value=8.3e-08 Score=49.41 Aligned_cols=48 Identities=23% Similarity=0.319 Sum_probs=41.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+++++++++.|++|++|..++..|+++|++|++++|+.++++...+.+
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l 72 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSL 72 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 467889999999999999999999999999999999988776655433
No 224
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.71 E-value=4.1e-08 Score=51.14 Aligned_cols=32 Identities=34% Similarity=0.469 Sum_probs=29.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++|||++++||..+++.|+++|++|++++|+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~ 32 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSS 32 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 47999999999999999999999999998865
No 225
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.70 E-value=6.2e-08 Score=53.50 Aligned_cols=37 Identities=30% Similarity=0.384 Sum_probs=33.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++++++|||++|.||.+++++|+++|++|++++|..
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~ 49 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFS 49 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5678999999999999999999999999999998853
No 226
>KOG1478|consensus
Probab=98.68 E-value=4.5e-08 Score=52.94 Aligned_cols=47 Identities=32% Similarity=0.467 Sum_probs=38.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCC-----CeEEEEecChhHHHhhhcCCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSG-----LTVVGLARRRHRVRRSTAVPK 51 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~ 51 (62)
+.|+++|||+++|+|.+++.+|+... .++++++|+.+++++.+..+.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk 53 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALK 53 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHH
Confidence 35889999999999999999998754 358889999988887776553
No 227
>KOG4169|consensus
Probab=98.67 E-value=6.4e-08 Score=51.43 Aligned_cols=42 Identities=24% Similarity=0.364 Sum_probs=36.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
+++||.+++||+.+|||+.+...|+.+|..+.+++.+.++.+
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~ 43 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPE 43 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHH
Confidence 578999999999999999999999999988888777665543
No 228
>CHL00194 ycf39 Ycf39; Provisional
Probab=98.64 E-value=1.5e-07 Score=51.37 Aligned_cols=36 Identities=28% Similarity=0.422 Sum_probs=32.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+++|||++|.+|.+++++|+++|++|.+++|+.+..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~ 37 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA 37 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh
Confidence 689999999999999999999999999999986543
No 229
>PLN02427 UDP-apiose/xylose synthase
Probab=98.63 E-value=1.7e-07 Score=52.29 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALS-GLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r~~~~~ 43 (62)
.+.++++|||++|.||.++++.|+++ |++|++++|+.+..
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~ 52 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKI 52 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhh
Confidence 34568999999999999999999998 59999999876543
No 230
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.60 E-value=1e-07 Score=55.70 Aligned_cols=49 Identities=22% Similarity=0.374 Sum_probs=40.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVPK 51 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~ 51 (62)
.+.+|+++||||+|+||..+++++++.+. ++++.++++...-....++.
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~ 296 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELR 296 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHH
Confidence 36799999999999999999999999874 68889998877655554443
No 231
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.59 E-value=4e-07 Score=50.18 Aligned_cols=37 Identities=24% Similarity=0.425 Sum_probs=31.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecChhHH
Q psy6647 7 RIVLVTGACSSLGETLCKELALS-GLTVVGLARRRHRV 43 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r~~~~~ 43 (62)
++++|||++|.||..+++.|++. |++|++++|+.+..
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~ 39 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL 39 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH
Confidence 36999999999999999999886 69999999876543
No 232
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.57 E-value=4.9e-07 Score=46.31 Aligned_cols=40 Identities=23% Similarity=0.273 Sum_probs=33.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++|||++ |++..++..|+++|++|++++|+++..+.+..
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~ 41 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKR 41 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 58999998 67777999999999999999998877665543
No 233
>KOG1199|consensus
Probab=98.57 E-value=1.4e-07 Score=48.75 Aligned_cols=48 Identities=27% Similarity=0.280 Sum_probs=41.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPK 51 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 51 (62)
.++-+.++||+.+|+|++.+++|+.+|++|++.|...+...+...++.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg 54 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG 54 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC
Confidence 467789999999999999999999999999999997776666666653
No 234
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.57 E-value=2.8e-07 Score=51.86 Aligned_cols=38 Identities=34% Similarity=0.497 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
.+++++|||++|+||..+++.|+++|++|++++|+...
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~ 96 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSG 96 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhh
Confidence 46789999999999999999999999999999997643
No 235
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.57 E-value=3.8e-07 Score=54.14 Aligned_cols=39 Identities=23% Similarity=0.237 Sum_probs=33.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALS-GLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r~~~~ 42 (62)
.++++++|||++|.||.+++++|+++ |++|++++|....
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~ 352 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDA 352 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchh
Confidence 35678999999999999999999985 7999999986643
No 236
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.54 E-value=2.1e-07 Score=46.15 Aligned_cols=35 Identities=34% Similarity=0.389 Sum_probs=30.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGL-TVVGLARRRH 41 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~ 41 (62)
++++|||+++++|.++++.|+++|+ .|++.+|+++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~ 36 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP 36 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC
Confidence 4689999999999999999999986 6788888654
No 237
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.53 E-value=3.2e-07 Score=52.45 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
++++++|||++|.||.++++.|+++|++|+++++.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~ 152 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNF 152 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCC
Confidence 46889999999999999999999999999998864
No 238
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.53 E-value=2.3e-07 Score=50.31 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=32.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+++|||++|++|..+++.|+++|++|++++|+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 36 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSD 36 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcc
Confidence 68999999999999999999999999999997654
No 239
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.51 E-value=2.4e-07 Score=48.75 Aligned_cols=31 Identities=29% Similarity=0.501 Sum_probs=28.1
Q ss_pred cCC--ChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 13 GAC--SSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 13 G~~--~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
|++ +|||+++++.|+++|++|++++|+.+..
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~ 33 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKL 33 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHH
Confidence 455 9999999999999999999999998874
No 240
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.51 E-value=4.3e-07 Score=51.88 Aligned_cols=34 Identities=24% Similarity=0.279 Sum_probs=31.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.++++|||++|.||.++++.|+++|++|++++|.
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~ 153 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNF 153 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999874
No 241
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.50 E-value=4.2e-07 Score=50.76 Aligned_cols=36 Identities=14% Similarity=0.247 Sum_probs=33.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.+++++|||++|.||.+++..|.++|++|++++|..
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 468899999999999999999999999999999853
No 242
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.48 E-value=2.5e-07 Score=49.49 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=31.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
++|||++|.||.++++.|+++|++|++++|+++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 5899999999999999999999999999997654
No 243
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.48 E-value=5e-07 Score=48.71 Aligned_cols=34 Identities=38% Similarity=0.577 Sum_probs=31.5
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
++|||++|.||.+++.+|.++|++|..++|....
T Consensus 3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~ 36 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDG 36 (314)
T ss_pred EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcc
Confidence 8999999999999999999999999999986543
No 244
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.47 E-value=8.2e-07 Score=43.63 Aligned_cols=47 Identities=23% Similarity=0.258 Sum_probs=41.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~~~~~~~ 50 (62)
++++++++|.|+ ||.|+.++..|...|++ |+++.|+.++++++.+.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~ 56 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF 56 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence 578899999997 99999999999999976 999999999888777665
No 245
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.47 E-value=5e-07 Score=49.46 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=35.5
Q ss_pred EEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 9 VLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
++||||+|.||..+++++++.+ .+++++|+++..+-.+..++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l 43 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELEREL 43 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHC
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHH
Confidence 6899999999999999999988 47999999988776666555
No 246
>KOG1611|consensus
Probab=98.46 E-value=5.9e-07 Score=47.73 Aligned_cols=39 Identities=33% Similarity=0.450 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhC-CCeEEE-EecChhHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALS-GLTVVG-LARRRHRV 43 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~-~~r~~~~~ 43 (62)
..+.++|||+.+|||..++++|... |..+++ ..|+++.+
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a 42 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA 42 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh
Confidence 3466999999999999999999864 555554 45567764
No 247
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.45 E-value=6e-07 Score=46.03 Aligned_cols=32 Identities=28% Similarity=0.459 Sum_probs=29.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++|||+++|||.++++.|+++ ++|++++|++
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 6899999999999999999998 9999998854
No 248
>PLN02778 3,5-epimerase/4-reductase
Probab=98.45 E-value=6.1e-07 Score=48.89 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=29.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
.++++|||++|.||.++++.|.++|++|+....
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~ 41 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG 41 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC
Confidence 478999999999999999999999999876543
No 249
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.4e-06 Score=46.26 Aligned_cols=40 Identities=28% Similarity=0.346 Sum_probs=36.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
.++|||++|.+|.+++++|..+|++|.+..|+++......
T Consensus 2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~ 41 (275)
T COG0702 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA 41 (275)
T ss_pred eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc
Confidence 5899999999999999999999999999999988766554
No 250
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.43 E-value=1.4e-06 Score=45.30 Aligned_cols=34 Identities=32% Similarity=0.554 Sum_probs=30.3
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
++|||++|.+|.++++.|+++|+.|+...++...
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~ 34 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNS 34 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTG
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccc
Confidence 6899999999999999999999998888876543
No 251
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.42 E-value=9e-07 Score=45.22 Aligned_cols=32 Identities=34% Similarity=0.502 Sum_probs=29.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q psy6647 8 IVLVTGACSSLGETLCKELALSG-LTVVGLARR 39 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~ 39 (62)
+.+|||+.+++|..+++.|++++ .+++++.|+
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 57999999999999999999987 479999998
No 252
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.42 E-value=5.8e-07 Score=48.33 Aligned_cols=34 Identities=15% Similarity=0.289 Sum_probs=31.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
++|||++|.+|..++++|+++|++|.+..|+++.
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~ 35 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS 35 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 7899999999999999999999999999998753
No 253
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.41 E-value=1.3e-06 Score=48.17 Aligned_cols=33 Identities=33% Similarity=0.406 Sum_probs=30.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+.++||||+|.||.+++..|++.|++|++.|.-
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL 33 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNL 33 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecC
Confidence 368999999999999999999999999999873
No 254
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.40 E-value=1.1e-06 Score=49.87 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCChHHHH--HHHHHHhCCCeEEEEecC
Q psy6647 5 IGRIVLVTGACSSLGET--LCKELALSGLTVVGLARR 39 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~--~~~~l~~~g~~v~~~~r~ 39 (62)
.+|+++|||+++|+|.+ ++..| +.|++++++++.
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~ 75 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFE 75 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecC
Confidence 36899999999999999 89999 999998888753
No 255
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.40 E-value=1.1e-06 Score=48.08 Aligned_cols=32 Identities=38% Similarity=0.490 Sum_probs=29.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+++|||++|+||.++++.|+++|++|+++++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~ 33 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNL 33 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecC
Confidence 58999999999999999999999999998764
No 256
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.40 E-value=1.1e-06 Score=58.31 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALS-GLTVVGLARR 39 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r~ 39 (62)
++++++|||+++|||..+++.|+++ |++|++++|+
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 4789999999999999999999987 6999999998
No 257
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.39 E-value=1.2e-06 Score=49.78 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=33.2
Q ss_pred CCCCcEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGA----------------CSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|||| +|.+|.+++++|..+|++|++++++.
T Consensus 185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~ 238 (399)
T PRK05579 185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV 238 (399)
T ss_pred ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc
Confidence 367899999999 55599999999999999999988753
No 258
>KOG1610|consensus
Probab=98.38 E-value=1.9e-06 Score=47.56 Aligned_cols=47 Identities=23% Similarity=0.285 Sum_probs=40.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
..+|.++|||+.+|.|..+|.+|.++|+.|++...+++..+.+..+.
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~ 73 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET 73 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh
Confidence 56789999999999999999999999999999988777666555444
No 259
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.38 E-value=1.3e-06 Score=45.72 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=27.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSG--LTVVGLARRR 40 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~ 40 (62)
++++|||+++|||++++++|++++ ..+...+|+.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~ 36 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHH 36 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCC
Confidence 368999999999999999999985 5566666643
No 260
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=98.38 E-value=1.7e-06 Score=50.55 Aligned_cols=46 Identities=24% Similarity=0.314 Sum_probs=39.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+++
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 56789999999 69999999999999999999999888777665543
No 261
>PRK14982 acyl-ACP reductase; Provisional
Probab=98.38 E-value=1.7e-06 Score=48.25 Aligned_cols=48 Identities=25% Similarity=0.388 Sum_probs=40.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhC-C-CeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALS-G-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~-g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|||++|.||..+++.|+.+ | .+++++.|+++++..+.+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el 201 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL 201 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence 467899999999999999999999854 5 58999999887776665554
No 262
>KOG1429|consensus
Probab=98.37 E-value=1.5e-06 Score=47.81 Aligned_cols=36 Identities=25% Similarity=0.367 Sum_probs=32.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
..+.+++||||+|+||.++++.|..+|+.|+++|.-
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecc
Confidence 346789999999999999999999999999999873
No 263
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.35 E-value=2.7e-06 Score=46.14 Aligned_cols=46 Identities=17% Similarity=0.204 Sum_probs=39.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
+.++.++|+|+ ||+|++++..|...| .+|++++|+.++.+++.+++
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~ 167 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLF 167 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence 56788999997 999999999999999 78999999988877666544
No 264
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.34 E-value=1.7e-06 Score=49.25 Aligned_cols=37 Identities=32% Similarity=0.331 Sum_probs=33.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++++++|+|+++ +|.++++.|+++|++|++++++.
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~ 38 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKE 38 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCc
Confidence 57889999999866 99999999999999999999975
No 265
>PLN00016 RNA-binding protein; Provisional
Probab=98.31 E-value=1.7e-06 Score=48.40 Aligned_cols=38 Identities=29% Similarity=0.365 Sum_probs=34.1
Q ss_pred CCcEEEEE----cCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 5 IGRIVLVT----GACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 5 ~~~~~~it----G~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+.++++|| |++|.+|..+++.|+++|++|++++|+...
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~ 92 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEP 92 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcc
Confidence 34679999 999999999999999999999999997643
No 266
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=98.27 E-value=1.7e-06 Score=49.21 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=33.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.+++++|+|+++ +|.++++.|++.|++|++.+++.
T Consensus 2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~ 38 (447)
T PRK02472 2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP 38 (447)
T ss_pred CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence 46789999999975 99999999999999999999764
No 267
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.27 E-value=2e-06 Score=47.11 Aligned_cols=34 Identities=38% Similarity=0.440 Sum_probs=30.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEecChh
Q psy6647 8 IVLVTGACSSLGETLCKELALSG--LTVVGLARRRH 41 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 41 (62)
+++|||++|++|.++++.|+++| ++|+++.|+.+
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~ 36 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAAS 36 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCC
Confidence 37899999999999999999998 67999998654
No 268
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=98.26 E-value=7.2e-06 Score=42.75 Aligned_cols=46 Identities=22% Similarity=0.316 Sum_probs=39.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.++++.|.|. |.+|..+++.|.+.|++|++.+++++..+...+.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 467899999998 5899999999999999999999988776665544
No 269
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.26 E-value=2e-06 Score=46.86 Aligned_cols=36 Identities=31% Similarity=0.477 Sum_probs=32.6
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++|||++|.||.+++..|...|+.|+++.|++...+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~ 36 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS 36 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence 579999999999999999999999999999876544
No 270
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.25 E-value=2.5e-06 Score=45.76 Aligned_cols=31 Identities=39% Similarity=0.619 Sum_probs=29.2
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
++|||++|.+|.++++.|.++|++|++++|.
T Consensus 2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 2 ILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 7899999999999999999999999998884
No 271
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.25 E-value=2.6e-06 Score=46.26 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=26.1
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
++|||++|.||.+++++|+++|++++++.+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~ 31 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVD 31 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEec
Confidence 789999999999999999999986555544
No 272
>KOG1371|consensus
Probab=98.23 E-value=2.7e-06 Score=47.24 Aligned_cols=33 Identities=33% Similarity=0.430 Sum_probs=31.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
++.+++||++|.||.+++.+|.++|+.|+++|.
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDN 34 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDN 34 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEec
Confidence 578999999999999999999999999999986
No 273
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=98.23 E-value=2.4e-06 Score=46.40 Aligned_cols=32 Identities=34% Similarity=0.449 Sum_probs=28.7
Q ss_pred EEEcCCChHHHHHHHHHHhCC--CeEEEEecChh
Q psy6647 10 LVTGACSSLGETLCKELALSG--LTVVGLARRRH 41 (62)
Q Consensus 10 ~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 41 (62)
+||||+|.+|.+++++|+++| ++|.++++.+.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~ 34 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPP 34 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccc
Confidence 589999999999999999999 78888888654
No 274
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.23 E-value=5.7e-06 Score=44.79 Aligned_cols=32 Identities=34% Similarity=0.433 Sum_probs=28.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+++|||++|++|..+++.|.++|++|++.++.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~ 32 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNL 32 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 37899999999999999999999999888753
No 275
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.22 E-value=3.2e-06 Score=46.04 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=28.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+++|||++|.||.++++.|.++| +|+.++|.
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~ 32 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALAPLG-NLIALDVH 32 (299)
T ss_pred eEEEECCCCHHHHHHHHHhhccC-CEEEeccc
Confidence 59999999999999999999999 78888774
No 276
>PRK12320 hypothetical protein; Provisional
Probab=98.21 E-value=5.3e-06 Score=49.96 Aligned_cols=34 Identities=35% Similarity=0.611 Sum_probs=31.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+++|||++|.||.+++..|.++|++|+++++.+.
T Consensus 2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~ 35 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPH 35 (699)
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 5999999999999999999999999999998653
No 277
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.21 E-value=4.3e-06 Score=46.15 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=27.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEE-EEecC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVV-GLARR 39 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~-~~~r~ 39 (62)
++++|||++|+||.++++.|+++|++++ ++++.
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~ 35 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKL 35 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecC
Confidence 4699999999999999999999998744 45553
No 278
>PRK09620 hypothetical protein; Provisional
Probab=98.20 E-value=7.4e-06 Score=43.57 Aligned_cols=35 Identities=29% Similarity=0.441 Sum_probs=31.3
Q ss_pred CCCcEEEEEcCC----------------ChHHHHHHHHHHhCCCeEEEEec
Q psy6647 4 WIGRIVLVTGAC----------------SSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 4 ~~~~~~~itG~~----------------~gig~~~~~~l~~~g~~v~~~~r 38 (62)
+.|+.++||+|+ |.+|.++++.|+++|++|++++.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g 51 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHG 51 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeC
Confidence 468899999876 99999999999999999998875
No 279
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.18 E-value=7.1e-06 Score=48.86 Aligned_cols=37 Identities=19% Similarity=0.321 Sum_probs=32.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhC--CCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALS--GLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~--g~~v~~~~r~ 39 (62)
..++++++|||++|.||.++++.|.++ +++|++.++.
T Consensus 3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~ 41 (668)
T PLN02260 3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKL 41 (668)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 356789999999999999999999987 6789888874
No 280
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.16 E-value=9.2e-06 Score=43.84 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=27.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEec
Q psy6647 8 IVLVTGACSSLGETLCKELALSG--LTVVGLAR 38 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r 38 (62)
+++|||++|++|.+++++|++.| ++|++.++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~ 33 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDK 33 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecC
Confidence 37999999999999999999887 68888876
No 281
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.14 E-value=1.3e-05 Score=43.26 Aligned_cols=45 Identities=16% Similarity=0.125 Sum_probs=38.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
.++.++++|+ |++|++++..|++.|++|.+.+|++++.+++.+.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~ 160 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERF 160 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4678999998 69999999999999999999999987776655543
No 282
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=98.10 E-value=2.2e-05 Score=42.11 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=39.9
Q ss_pred CCCCCCcEEEEEcCC--ChHHHHHHHHHHhCCCeEEEEecChh---HHHhhhcCC
Q psy6647 1 MDRWIGRIVLVTGAC--SSLGETLCKELALSGLTVVGLARRRH---RVRRSTAVP 50 (62)
Q Consensus 1 m~~~~~~~~~itG~~--~gig~~~~~~l~~~g~~v~~~~r~~~---~~~~~~~~~ 50 (62)
|..++||+.+|+|-. ++|+..|++.+.++|+++.+++.++. +.+++.+++
T Consensus 1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~ 55 (259)
T COG0623 1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEEL 55 (259)
T ss_pred CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhc
Confidence 567899999999954 79999999999999999999988762 334444444
No 283
>PRK05865 hypothetical protein; Provisional
Probab=98.10 E-value=1.2e-05 Score=49.47 Aligned_cols=33 Identities=45% Similarity=0.621 Sum_probs=31.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++|||++|+||.++++.|+.+|++|++++|+.
T Consensus 2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~ 34 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHR 34 (854)
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCc
Confidence 589999999999999999999999999999864
No 284
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.10 E-value=1.9e-05 Score=44.89 Aligned_cols=42 Identities=26% Similarity=0.389 Sum_probs=36.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~ 49 (62)
+.++|.|+ |++|+.++..|++++ .+|++.+|+.+...+..+.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~ 44 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAEL 44 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhh
Confidence 45788888 999999999999998 8999999998887776554
No 285
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=98.08 E-value=1.3e-05 Score=45.49 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=32.2
Q ss_pred CCCCcEEEEEcC---------------CCh-HHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGA---------------CSS-LGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~---------------~~g-ig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+++++.++|||| |+| +|.++++.+..+|++|+++.++
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~ 234 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGP 234 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCC
Confidence 367899999999 556 9999999999999999987754
No 286
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.07 E-value=1.4e-05 Score=47.22 Aligned_cols=33 Identities=33% Similarity=0.372 Sum_probs=30.2
Q ss_pred EEEEEcCCChHHHHHHHHHH--hCCCeEEEEecCh
Q psy6647 8 IVLVTGACSSLGETLCKELA--LSGLTVVGLARRR 40 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~--~~g~~v~~~~r~~ 40 (62)
+++|||++|.||.+++..|+ ..|++|++++|+.
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~ 36 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ 36 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc
Confidence 69999999999999999999 5789999999964
No 287
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.05 E-value=9.1e-06 Score=44.02 Aligned_cols=32 Identities=28% Similarity=0.525 Sum_probs=28.1
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC-eEEEEecCh
Q psy6647 9 VLVTGACSSLGETLCKELALSGL-TVVGLARRR 40 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~ 40 (62)
++|||++|.+|.+++..|.++|+ .|+++++..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 58999999999999999999997 688887643
No 288
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.03 E-value=3.4e-05 Score=38.22 Aligned_cols=45 Identities=22% Similarity=0.287 Sum_probs=36.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~ 49 (62)
++++++.++|+ |++|..+++.|.+.| .+|.+.+|++++.++..++
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~ 62 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAER 62 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHH
Confidence 45788999997 899999999999985 7899999988776655443
No 289
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.03 E-value=1.3e-05 Score=44.21 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=26.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCe-EEEEec
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLT-VVGLAR 38 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r 38 (62)
+++|||++|+||.++++.|+++|+. |+..++
T Consensus 2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~ 33 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDK 33 (352)
T ss_pred eEEEECCCcHHhHHHHHHHHHhCCCeEEEecC
Confidence 5899999999999999999999876 544554
No 290
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.00 E-value=2.9e-05 Score=40.77 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=30.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++|+|++|.+|..+++.|++.+++|.+..|++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~ 33 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS 33 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc
Confidence 689999999999999999999999999999863
No 291
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.95 E-value=5.3e-05 Score=44.02 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=38.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
+.+++++++|+ ||+|++++..|...|++|++.+|++++.++..+.
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~ 374 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR 374 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 46788999996 7999999999999999999999988776665543
No 292
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.94 E-value=6.9e-05 Score=41.12 Aligned_cols=47 Identities=23% Similarity=0.309 Sum_probs=40.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCCCc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
+++.++|.|+ ||.+++++..|++.| .+++++.|+.++++++.+.+..
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~ 172 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE 172 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence 4688999987 999999999999999 5799999999988888766653
No 293
>KOG1430|consensus
Probab=97.92 E-value=4.3e-05 Score=43.13 Aligned_cols=38 Identities=26% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecChh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG--LTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~ 41 (62)
.+..+++||||+|.+|.+++.+|++++ .++.++|..+.
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~ 41 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT 41 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc
Confidence 356789999999999999999999988 78989888653
No 294
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.91 E-value=0.00011 Score=37.56 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=38.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++.++.++|.|++.-.|..++..|.++|++|.++.|+.+.+.+...+
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~~l~~ 87 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKEHTKQ 87 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHHHHhh
Confidence 57889999999966689999999999999999999987655544433
No 295
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.91 E-value=5.9e-05 Score=41.24 Aligned_cols=46 Identities=15% Similarity=0.071 Sum_probs=38.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
..+++++|.|+ ||.|++++..|...|. +|++++|+.++.+.+.+.+
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l 171 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL 171 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 45678999997 8899999999999996 7999999988877766544
No 296
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.84 E-value=0.00011 Score=40.13 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=38.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
+.++.++|.|+ ||.+++++..|.+.|. +|+++.|+.++.+++.+.+
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~ 169 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLG 169 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence 46788888886 9999999999999996 7999999988877766543
No 297
>PLN02996 fatty acyl-CoA reductase
Probab=97.83 E-value=6.5e-05 Score=43.76 Aligned_cols=37 Identities=22% Similarity=0.237 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC---CeEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG---LTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g---~~v~~~~r~~ 40 (62)
+++++++|||++|.+|..+++.|++.+ .+|++..|..
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~ 48 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS 48 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC
Confidence 578999999999999999999998764 3578888754
No 298
>PLN02503 fatty acyl-CoA reductase 2
Probab=97.82 E-value=6.3e-05 Score=44.92 Aligned_cols=36 Identities=22% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL---TVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~r~ 39 (62)
++++.++|||++|.+|..+++.|++.+. +|++..|.
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~ 155 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKA 155 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 4689999999999999999999998653 67888884
No 299
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.81 E-value=0.00016 Score=38.02 Aligned_cols=39 Identities=21% Similarity=0.276 Sum_probs=33.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.|++|.+|.+++..|.+.|++|.+.+|+++..+..
T Consensus 2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l 40 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEA 40 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHH
Confidence 478899889999999999999999999999988766544
No 300
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.77 E-value=0.00014 Score=39.85 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=38.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
.+++.++|.|+ ||.+++++..|++.|+ ++++++|+.++.+.+.+.+
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 45678899997 9999999999999986 7899999988877766543
No 301
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.75 E-value=0.00025 Score=38.92 Aligned_cols=41 Identities=24% Similarity=0.258 Sum_probs=35.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.++++.|.|. |++|..+++.|...|++|++.+|++++..
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~ 188 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA 188 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 457899999998 77999999999999999999999876543
No 302
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=97.74 E-value=0.00023 Score=39.22 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=36.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
.+.+++|+|+++++|..+++.+...|++|+.+.+++++.+.+.
T Consensus 151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK 193 (338)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4689999999999999999988889999998888776655443
No 303
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=97.74 E-value=0.00011 Score=39.14 Aligned_cols=30 Identities=33% Similarity=0.370 Sum_probs=24.8
Q ss_pred EEcCCChHHHHHHHHHHhCCC--eEEEEecCh
Q psy6647 11 VTGACSSLGETLCKELALSGL--TVVGLARRR 40 (62)
Q Consensus 11 itG~~~gig~~~~~~l~~~g~--~v~~~~r~~ 40 (62)
+||++|.+|..+...|++++. +|++..|..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~ 32 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRAS 32 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SS
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCc
Confidence 699999999999999999876 899999965
No 304
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=97.73 E-value=3.6e-05 Score=41.60 Aligned_cols=29 Identities=24% Similarity=0.405 Sum_probs=25.3
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 10 LVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 10 ~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
+|||++|.||.++++.|+..|++|++..+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~ 29 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRT 29 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeec
Confidence 58999999999999999999988776543
No 305
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.73 E-value=0.00027 Score=37.55 Aligned_cols=37 Identities=30% Similarity=0.551 Sum_probs=32.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.++|.|+ |-+|..+++.|.++|++|++++++++..++
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~ 38 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEE 38 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHH
Confidence 4666676 889999999999999999999999988776
No 306
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=97.73 E-value=5.6e-05 Score=41.17 Aligned_cols=34 Identities=32% Similarity=0.511 Sum_probs=30.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++++|+|++|.+|.++...|.++|++++.++|+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~ 34 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD 34 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence 3689999999999999999999999999987753
No 307
>PRK06849 hypothetical protein; Provisional
Probab=97.69 E-value=0.00025 Score=40.03 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+.++++|||++..++..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46889999999999999999999999999999987643
No 308
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.00032 Score=39.05 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=26.3
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCC--eEEEEec
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGL--TVVGLAR 38 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~r 38 (62)
+.++||||+|+||.++++.+..+.. +|+..|.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~Dk 34 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDK 34 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEec
Confidence 3689999999999999999988753 4676665
No 309
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.68 E-value=0.00041 Score=34.55 Aligned_cols=43 Identities=28% Similarity=0.324 Sum_probs=36.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++|+.+.|.|.+.-.|..++..|.++|++|.++.++..++++
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~ 67 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS 67 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence 4789999999999999999999999999999999865443443
No 310
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=97.68 E-value=0.00034 Score=38.35 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|+|+++++|...++.+...|++|+.+++++++.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999988888999999888877655443
No 311
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.67 E-value=0.00044 Score=38.12 Aligned_cols=44 Identities=20% Similarity=0.242 Sum_probs=37.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|+.++|.|++.-+|+.++..|..+|++|+++.+....+.+.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l~~~ 198 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDMASY 198 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHHHH
Confidence 47899999999999999999999999999999998765444433
No 312
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.65 E-value=0.00037 Score=35.46 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=34.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++.+|.+++.|.+.-+|+.++..|.++++.|.++...-.++++..
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~~ 77 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEIT 77 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHHH
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccccee
Confidence 478999999999999999999999999999999877554444443
No 313
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=97.63 E-value=0.00039 Score=38.25 Aligned_cols=41 Identities=22% Similarity=0.304 Sum_probs=34.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRST 47 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~ 47 (62)
.+++|.|+++++|...++.....|+ +|+.+++++++.+.+.
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~ 197 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLK 197 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 7899999999999999988888898 7999988776655443
No 314
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.61 E-value=0.00024 Score=37.13 Aligned_cols=38 Identities=21% Similarity=0.349 Sum_probs=34.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|.|++|-.|..+......+|+.|+.+.|++.+...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~ 39 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAA 39 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccc
Confidence 57899999999999999999999999999999876543
No 315
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=97.60 E-value=0.00045 Score=38.50 Aligned_cols=42 Identities=29% Similarity=0.358 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+++++|...++.....|++|+.+++++++.+.+
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~ 199 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL 199 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 467899999999999999988888999999888877665543
No 316
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.59 E-value=0.00041 Score=40.05 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=33.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.|+.|.+|.+++..|.+.|++|++.+|+++...+.
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 578899889999999999999999999999987664433
No 317
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=97.59 E-value=0.00056 Score=37.31 Aligned_cols=42 Identities=26% Similarity=0.420 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+++++|...++.....|++|+.+++++++.+.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l 184 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL 184 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999888888999999888877654433
No 318
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.58 E-value=0.0004 Score=37.94 Aligned_cols=43 Identities=14% Similarity=0.240 Sum_probs=35.8
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcC
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~ 49 (62)
++.+++.|+ ||.+++++..|.+.|. +|.++.|++++.+.+.+.
T Consensus 122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~ 165 (272)
T PRK12550 122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL 165 (272)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence 457888886 9999999999999986 599999998887776543
No 319
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.57 E-value=0.00047 Score=38.23 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=37.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.||.+.+.|.++-+|+.++..|.++|+.|+++.+.....++.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~ 199 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL 199 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence 46899999999999999999999999999999997755444433
No 320
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.57 E-value=0.00069 Score=37.24 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=36.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.++.++|.|+++-.|+.++..|.++|++|+++.+....+.+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~ 198 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE 198 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH
Confidence 4678999999998889999999999999999999885544433
No 321
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.57 E-value=0.00075 Score=34.57 Aligned_cols=40 Identities=23% Similarity=0.425 Sum_probs=34.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
.+.++++.|.|. |.||+.+++.+...|++|+..+++....
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~ 72 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPE 72 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHH
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChh
Confidence 467899999987 9999999999999999999999987643
No 322
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.56 E-value=0.00053 Score=31.49 Aligned_cols=38 Identities=18% Similarity=0.272 Sum_probs=32.6
Q ss_pred CCChHHHHHHHHHHhCC---CeEEEE-ecChhHHHhhhcCCC
Q psy6647 14 ACSSLGETLCKELALSG---LTVVGL-ARRRHRVRRSTAVPK 51 (62)
Q Consensus 14 ~~~gig~~~~~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~ 51 (62)
|+|.+|.+++..|.+.| .+|.+. +|++++.+++.+++.
T Consensus 6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~ 47 (96)
T PF03807_consen 6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG 47 (96)
T ss_dssp STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence 56999999999999999 899955 999998888776654
No 323
>KOG1203|consensus
Probab=97.56 E-value=0.00041 Score=39.91 Aligned_cols=44 Identities=27% Similarity=0.379 Sum_probs=38.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+...++++|++|.+|+-+++.|.++|+.|....|+.+..++...
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~ 121 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG 121 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence 45789999999999999999999999999999998877666544
No 324
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.56 E-value=0.00076 Score=34.41 Aligned_cols=39 Identities=23% Similarity=0.281 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+.+|.++|.|- |.+|+.+++.|...|++|++++.+|..+
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a 59 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA 59 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH
Confidence 56899999986 9999999999999999999999998654
No 325
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=97.53 E-value=0.0003 Score=36.20 Aligned_cols=39 Identities=26% Similarity=0.377 Sum_probs=31.1
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+.|.|+ |.+|..++..++..|++|.+.+++++.++...+
T Consensus 2 V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~ 40 (180)
T PF02737_consen 2 VAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARK 40 (180)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred EEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence 567776 999999999999999999999999887654443
No 326
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=97.53 E-value=0.00072 Score=36.33 Aligned_cols=41 Identities=22% Similarity=0.356 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.++.++|+|+++++|..++..+...|+++++++++++..+.
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~ 179 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA 179 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46789999999999999999999999999999887655443
No 327
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.53 E-value=0.00055 Score=39.38 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=40.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
++.++++++.|+ |+.|..++..|...|. +++++.|+.++++.+.+++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 467889999998 9999999999999985 7999999988877776655
No 328
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=97.52 E-value=0.00078 Score=36.65 Aligned_cols=41 Identities=27% Similarity=0.367 Sum_probs=35.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+.+++|+|+++++|..+++.+...|.+|+.+.++++..+.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~ 202 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI 202 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 36789999999999999999999999999998887665443
No 329
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.51 E-value=0.00073 Score=38.83 Aligned_cols=47 Identities=23% Similarity=0.289 Sum_probs=38.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|.|+ |.+|..++..|...| .+|++++|+.++.....+.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 356789999997 999999999999999 78999999987766555443
No 330
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.51 E-value=0.00027 Score=42.38 Aligned_cols=29 Identities=21% Similarity=0.201 Sum_probs=26.3
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEE
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~ 34 (62)
.++++|||++|.||.++++.|..+|++|.
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 45799999999999999999999999883
No 331
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.50 E-value=0.00088 Score=36.06 Aligned_cols=41 Identities=22% Similarity=0.329 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.++.++|+|+++++|..+++.+...|.+|++++++++..+.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 184 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL 184 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46889999999999999999999999999999887765443
No 332
>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised. This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].
Probab=97.49 E-value=0.00035 Score=35.49 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=31.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCC
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+|..+-+|++++.+|+++|.+|... +.+..+.+..++
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~ 40 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEA 40 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHc
Confidence 4789999999999999999999999988 444444444444
No 333
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.48 E-value=0.00062 Score=37.84 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=37.6
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecChhHHHhhhc
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGL--TVVGLARRRHRVRRSTA 48 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~r~~~~~~~~~~ 48 (62)
|++-.++++.|.|+ |.+|..++..++..+. ++.+.|++++.++....
T Consensus 1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~ 49 (315)
T PRK00066 1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAM 49 (315)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHH
Confidence 55556789999998 9999999999998885 79999998776544433
No 334
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=97.47 E-value=0.00051 Score=30.95 Aligned_cols=33 Identities=27% Similarity=0.334 Sum_probs=21.3
Q ss_pred cEEEEEcCCChHHHHHHHHHH-hCCCeEEEEecC
Q psy6647 7 RIVLVTGACSSLGETLCKELA-LSGLTVVGLARR 39 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~-~~g~~v~~~~r~ 39 (62)
|+++|+|+|+|.|++.-..++ ..|++.+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeec
Confidence 889999999999999444333 556777777654
No 335
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=97.46 E-value=0.00075 Score=37.63 Aligned_cols=39 Identities=28% Similarity=0.426 Sum_probs=31.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
+.+++|+|++||+|...++.....|+.++++..+.++.+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 689999999999999999988888866666665555444
No 336
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.44 E-value=0.00047 Score=36.73 Aligned_cols=33 Identities=15% Similarity=0.276 Sum_probs=26.6
Q ss_pred cEEEEEcCC-ChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 7 RIVLVTGAC-SSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 7 ~~~~itG~~-~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.+-.||..+ |++|.++++.|+++|++|++++++
T Consensus 16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred CceeecCccchHHHHHHHHHHHhCCCEEEEEECc
Confidence 345566555 559999999999999999999865
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.43 E-value=0.0011 Score=37.93 Aligned_cols=40 Identities=25% Similarity=0.385 Sum_probs=34.2
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
.++|.|+ |.+|..++..|.++|+.+++++++++..+...+
T Consensus 2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~ 41 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQD 41 (453)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 5778887 999999999999999999999998887665543
No 338
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.42 E-value=0.0015 Score=36.09 Aligned_cols=43 Identities=19% Similarity=0.197 Sum_probs=36.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|+.++|.|.+.-+|+.++..|.++|+.|.++.....++.+
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~ 196 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSF 196 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHH
Confidence 4679999999999999999999999999999988654444433
No 339
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.41 E-value=0.0011 Score=36.51 Aligned_cols=43 Identities=30% Similarity=0.362 Sum_probs=36.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|+.++|.|.+.-+|+.++..|..+++.|+++.+.-.++++
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l~~ 198 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNLRH 198 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCHHH
Confidence 4679999999999999999999999999999998775444443
No 340
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.40 E-value=0.0012 Score=38.03 Aligned_cols=41 Identities=17% Similarity=0.232 Sum_probs=35.4
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+.+++++|.|. |.+|..++..+...|++|+++++++.+...
T Consensus 200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~ 240 (413)
T cd00401 200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQ 240 (413)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHH
Confidence 46889999997 789999999999999999999998776543
No 341
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.40 E-value=0.0016 Score=35.99 Aligned_cols=39 Identities=33% Similarity=0.340 Sum_probs=34.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+.+++++|.|. |++|+.++..+...|++|++++|+++..
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~ 188 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL 188 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 46889999997 7899999999999999999999987653
No 342
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.38 E-value=0.0012 Score=37.97 Aligned_cols=47 Identities=30% Similarity=0.380 Sum_probs=38.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
++.+++++|.|+ |.+|..++..+...|. +|++++|++++...+..++
T Consensus 179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 356788999987 9999999999999896 7999999988766555443
No 343
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.38 E-value=0.00099 Score=34.59 Aligned_cols=36 Identities=28% Similarity=0.386 Sum_probs=26.7
Q ss_pred CCCcEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 4 WIGRIVLVTGA----------------CSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
+.|++++||+| +|-.|.++++.+..+|++|+++...
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~ 52 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGP 52 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-T
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecC
Confidence 45777888866 4778999999999999999988764
No 344
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=97.38 E-value=0.0014 Score=36.95 Aligned_cols=42 Identities=24% Similarity=0.371 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
.++++.|+|.+ |+|...++.....|++|+.+++++++.+...
T Consensus 166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~ 207 (339)
T COG1064 166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK 207 (339)
T ss_pred CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence 47899999997 9999988888889999999999988765443
No 345
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=97.38 E-value=0.0016 Score=35.44 Aligned_cols=41 Identities=34% Similarity=0.443 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+..++|+|+++++|..++..+...|++++++++++++.+.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~ 206 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER 206 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46789999999999999999999999999999887765443
No 346
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=97.37 E-value=0.00071 Score=35.46 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=33.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.++.++|.|+ |.+|...+..|.+.|++|++++++.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~ 43 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL 43 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 578999999998 8999999999999999999998754
No 347
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.36 E-value=0.00079 Score=34.02 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=31.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
++.++.++|.|+ |.+|...++.|++.|++|.+++.
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 468999999998 88999999999999999998864
No 348
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.35 E-value=0.0014 Score=37.98 Aligned_cols=39 Identities=21% Similarity=0.260 Sum_probs=34.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+.+++++|.|. |.+|..++..+...|++|+++++++.+.
T Consensus 210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra 248 (425)
T PRK05476 210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA 248 (425)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence 46899999997 7999999999999999999999987654
No 349
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.35 E-value=0.0013 Score=37.14 Aligned_cols=40 Identities=28% Similarity=0.391 Sum_probs=32.7
Q ss_pred EEEEcCCChHHHHHHHHHHhCCC--eEEEEecChhHHHhhhcC
Q psy6647 9 VLVTGACSSLGETLCKELALSGL--TVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~--~v~~~~r~~~~~~~~~~~ 49 (62)
++|.|+ |.+|..+++.|+++.. +|++.+|+.++++...+.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~ 42 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEK 42 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhh
Confidence 578899 9999999999999863 899999999998887764
No 350
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.34 E-value=0.0016 Score=35.95 Aligned_cols=43 Identities=19% Similarity=0.225 Sum_probs=36.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|+.++|.|.|.-+|+.++..|.++++.|+++......+++
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~ 197 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAE 197 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHH
Confidence 4689999999999999999999999999999988654444443
No 351
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.33 E-value=0.0004 Score=32.67 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=31.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++++.++|.|+ |.++..-++.|++.|++|++++...
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence 578999999998 8999999999999999999999874
No 352
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.33 E-value=0.00042 Score=36.87 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=25.7
Q ss_pred EEEEEc-CCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 8 IVLVTG-ACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 8 ~~~itG-~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
+-.||. ++||+|.++++.|+++|++|+++++
T Consensus 16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~ 47 (227)
T TIGR02114 16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTT 47 (227)
T ss_pred ceeecCCcccHHHHHHHHHHHHCCCEEEEEcC
Confidence 344554 4689999999999999999999875
No 353
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.32 E-value=0.0011 Score=38.41 Aligned_cols=36 Identities=25% Similarity=0.302 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+.++.++|.|+ |++|.+++..|.++|++|+++++++
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 56788999997 8899999999999999999998654
No 354
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.32 E-value=0.001 Score=36.48 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=32.6
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++-|.|+ |.+|..++..++..|++|++.+++++.++.
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 35667776 899999999999999999999999887655
No 355
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=97.31 E-value=0.00086 Score=37.33 Aligned_cols=35 Identities=34% Similarity=0.553 Sum_probs=32.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.|+++|||-+|--|..+++.|+++|+.|..+.|..
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrs 36 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRS 36 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeecc
Confidence 58899999999999999999999999999998864
No 356
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.29 E-value=0.0012 Score=42.21 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=30.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCC----CeEEEEecCh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSG----LTVVGLARRR 40 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g----~~v~~~~r~~ 40 (62)
.+++++||++|.+|.+++..|++++ ++|+...|..
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~ 1009 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAK 1009 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcC
Confidence 4789999999999999999999876 7888888864
No 357
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.29 E-value=0.0018 Score=35.43 Aligned_cols=38 Identities=26% Similarity=0.328 Sum_probs=32.5
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++.|.|+ |.+|..++..++..|++|++.+++++..+.
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 42 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEA 42 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 45777776 999999999999999999999998876654
No 358
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.29 E-value=0.002 Score=35.49 Aligned_cols=46 Identities=17% Similarity=0.247 Sum_probs=35.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCh---hHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRR---HRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~---~~~~~~~~~~ 50 (62)
.++++++|.|+ ||-+++++..++..|. ++.++.|++ ++++.+.+.+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~ 171 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV 171 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence 46788999997 7779999999998885 799999984 3555555443
No 359
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.29 E-value=0.0015 Score=36.09 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=35.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++|+.|+++.....+++
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~ 196 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLA 196 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHH
Confidence 467999999999999999999999999999988765443333
No 360
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.28 E-value=0.0027 Score=32.06 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=33.0
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++-+.|. |..|..++..|.+.|++|.+.+|++++.+++.+.
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~ 43 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEA 43 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHT
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHh
Confidence 4556666 8999999999999999999999998887766643
No 361
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.28 E-value=0.0018 Score=35.76 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=36.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|+.++|.|.+.-+|+.++..|..+++.|.++...-.++++
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~~ 203 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLKK 203 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHHH
Confidence 4679999999999999999999999999999998764433433
No 362
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.28 E-value=0.0021 Score=34.74 Aligned_cols=41 Identities=29% Similarity=0.344 Sum_probs=35.0
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++..++|+|+++++|..+...+...|++++.++++++..+.
T Consensus 144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~ 184 (328)
T cd08268 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA 184 (328)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46789999999999999999999999999999887655443
No 363
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.27 E-value=0.002 Score=35.73 Aligned_cols=46 Identities=30% Similarity=0.357 Sum_probs=37.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~ 50 (62)
+.++++++.|+ |.+|..++..+...| .+|++++|++++...+.+++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~ 222 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL 222 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence 56788999987 999999999998865 67999999988776665554
No 364
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.26 E-value=0.003 Score=33.24 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=32.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++++.++|.|+ |.+|..-++.|++.|++|++++.+.
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 578899999997 8888999999999999999998754
No 365
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.26 E-value=0.0016 Score=37.49 Aligned_cols=37 Identities=19% Similarity=0.291 Sum_probs=32.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+.++++.|+|. ++.|.++++.|+++|++|.+.|..+.
T Consensus 3 ~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~ 39 (445)
T PRK04308 3 FQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELK 39 (445)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 56789999997 48999999999999999999987543
No 366
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.26 E-value=0.0018 Score=35.77 Aligned_cols=37 Identities=16% Similarity=0.129 Sum_probs=31.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|.| .|-+|.+++..|+.+|++|++.+++++..+.
T Consensus 4 ~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~ 40 (308)
T PRK06129 4 SVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAA 40 (308)
T ss_pred EEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHH
Confidence 577888 5889999999999999999999998765443
No 367
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=97.25 E-value=0.0015 Score=34.62 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=31.0
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecC-hhHHHhhhcC
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARR-RHRVRRSTAV 49 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~-~~~~~~~~~~ 49 (62)
.+..+|+|.+|.+++.+|...|++|++..|+ ++..+...+.
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~ 44 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAA 44 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHh
Confidence 4456778999999999999999999998664 4444444443
No 368
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.25 E-value=0.0028 Score=36.05 Aligned_cols=43 Identities=23% Similarity=0.139 Sum_probs=35.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
+.+..++|.|+ |.+|...+..+...|++|+++++++++.+.+.
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~ 207 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLD 207 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 34566888877 89999999999999999999999877655443
No 369
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=97.25 E-value=0.0018 Score=34.06 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=32.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLA 37 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~ 37 (62)
++.||.++|.|.+.-+|+.++..|.++|+.|.+++
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~ 93 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVD 93 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEe
Confidence 57899999999999999999999999999999995
No 370
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.23 E-value=0.0023 Score=31.78 Aligned_cols=40 Identities=25% Similarity=0.317 Sum_probs=33.3
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEecChhHHHhhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSG--LTVVGLARRRHRVRRST 47 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~ 47 (62)
++.|.|++|.+|.+++..+...+ .++++.|++++.++...
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a 43 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEA 43 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeee
Confidence 58899999999999999998876 57999999976654443
No 371
>PRK04148 hypothetical protein; Provisional
Probab=97.23 E-value=0.0019 Score=32.01 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
+++.++..|.+ .|.+++..|.+.|++|+++|.++...+...+
T Consensus 16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~ 57 (134)
T PRK04148 16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK 57 (134)
T ss_pred cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 35678888876 6677888999999999999999987655443
No 372
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.23 E-value=0.0017 Score=35.83 Aligned_cols=42 Identities=19% Similarity=0.220 Sum_probs=35.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.||.++|.|.+.-+|+.++..|.++++.|+++...-.+++
T Consensus 156 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~ 197 (284)
T PRK14177 156 DVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLP 197 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999999999999875443343
No 373
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.0018 Score=35.80 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=35.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.|.-+|+.++..|.++++.|.++...-.+++
T Consensus 152 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~ 193 (287)
T PRK14173 152 PLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP 193 (287)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 467999999999999999999999999999988765433333
No 374
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.22 E-value=0.0017 Score=35.86 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=34.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCC--CeEEEEecChhHHHhhhcCC
Q psy6647 8 IVLVTGACSSLGETLCKELALSG--LTVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~~~~~~~~~~~ 50 (62)
++.|.|+ |++|..++..++..| .++++++++++..+....++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL 45 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDL 45 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhH
Confidence 5778886 999999999999988 58999999887766555443
No 375
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.22 E-value=0.002 Score=35.57 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=35.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|.++.....++.
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~ 196 (282)
T PRK14180 155 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK 196 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 467999999999999999999999999999998866443333
No 376
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.21 E-value=0.0025 Score=35.36 Aligned_cols=38 Identities=24% Similarity=0.270 Sum_probs=34.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe-cCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLA-RRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~-r~~ 40 (62)
++.|+.+.+.|.++-.|..++..|+++|+.|.++. |++
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~ 193 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR 193 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence 46899999999999999999999999999999994 654
No 377
>PLN02494 adenosylhomocysteinase
Probab=97.21 E-value=0.0025 Score=37.43 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=33.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+.+++++|.|. |.||+.++..+...|++|+++++++.+
T Consensus 252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r 289 (477)
T PLN02494 252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC 289 (477)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 46899999997 799999999999999999999988754
No 378
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.20 E-value=0.0019 Score=35.57 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=36.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.||.++|.|.+.-+|+.++..|..+++.|.++...-.++.+
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~ 197 (278)
T PRK14172 155 DIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKE 197 (278)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 4689999999999999999999999999999988754433433
No 379
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=97.20 E-value=0.0029 Score=35.11 Aligned_cols=41 Identities=17% Similarity=0.281 Sum_probs=33.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+ |++|...++.+...|+ +|+++++++++.+..
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a 210 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA 210 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence 4678999985 9999999988888898 688889887766543
No 380
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.20 E-value=0.00056 Score=35.82 Aligned_cols=35 Identities=20% Similarity=0.298 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~ 39 (62)
++.++++|.|+ ||+|..++..|++.|. +++++|.+
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 56678899987 8999999999999998 69999887
No 381
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=97.20 E-value=0.0027 Score=35.33 Aligned_cols=40 Identities=23% Similarity=0.395 Sum_probs=33.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+.+++|.|+ +++|...++.+...|.+|+++++++++.+.
T Consensus 166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~ 205 (349)
T TIGR03201 166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEM 205 (349)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4678999998 999999998888889999999887766543
No 382
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.19 E-value=0.002 Score=32.37 Aligned_cols=38 Identities=26% Similarity=0.341 Sum_probs=31.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
+.|.|+ |..|.+++..|..+|++|.+..|+++..+.+.
T Consensus 2 I~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~ 39 (157)
T PF01210_consen 2 IAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEIN 39 (157)
T ss_dssp EEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHH
T ss_pred EEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence 556675 88999999999999999999999987665544
No 383
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.19 E-value=0.0023 Score=34.93 Aligned_cols=39 Identities=18% Similarity=0.365 Sum_probs=33.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++.|.|+ |-+|..++..|++.|++|++.+++++..+..
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 40 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESA 40 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH
Confidence 35677777 8999999999999999999999998776554
No 384
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=97.19 E-value=0.0031 Score=34.37 Aligned_cols=40 Identities=30% Similarity=0.292 Sum_probs=34.1
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+.+++|.|+++++|..++......|.+|+.+++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (326)
T cd08289 147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADY 186 (326)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHH
Confidence 5689999999999999999888899999988887765443
No 385
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=97.19 E-value=0.0033 Score=33.91 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=34.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.++.++|+|+++++|..+...+...|++|+.+.++++..+
T Consensus 139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4678999999999999999999999999999888766543
No 386
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.19 E-value=0.0022 Score=35.36 Aligned_cols=42 Identities=21% Similarity=0.154 Sum_probs=34.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|.++...-.+++
T Consensus 154 ~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~ 195 (281)
T PRK14183 154 DVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK 195 (281)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH
Confidence 468999999999999999999999999999987754333333
No 387
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.16 E-value=0.0039 Score=34.35 Aligned_cols=45 Identities=24% Similarity=0.349 Sum_probs=35.0
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCC--eEEEEecChhHHHhh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGL--TVVGLARRRHRVRRS 46 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~--~v~~~~r~~~~~~~~ 46 (62)
|+....+++.|.| .|.+|..++..|.+.|. +|++.+++++..+..
T Consensus 1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a 47 (307)
T PRK07502 1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARA 47 (307)
T ss_pred CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH
Confidence 4544556788887 58999999999999884 899999987765443
No 388
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.16 E-value=0.0017 Score=35.50 Aligned_cols=38 Identities=16% Similarity=0.349 Sum_probs=32.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++.|.|+ |.+|..++..++..|++|++.+++++..+.
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~ 41 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKN 41 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 45777776 889999999999999999999998876653
No 389
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.15 E-value=0.0039 Score=34.65 Aligned_cols=39 Identities=31% Similarity=0.244 Sum_probs=31.9
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++.|.|+ |.+|..++..|++.|++|.+.+|+++..+...
T Consensus 6 ~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~ 44 (328)
T PRK14618 6 RVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALA 44 (328)
T ss_pred eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4666665 99999999999999999999999877655443
No 390
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.14 E-value=0.0036 Score=36.79 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=34.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
.+.++++.|.|. |.+|+.++..+...|++|+++++++...
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a 290 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICA 290 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 367899999997 5799999999999999999998876543
No 391
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.14 E-value=0.0024 Score=35.46 Aligned_cols=42 Identities=21% Similarity=0.237 Sum_probs=35.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|.++...-..++
T Consensus 155 ~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~ 196 (297)
T PRK14186 155 DIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLA 196 (297)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 467999999999999999999999999999988855333333
No 392
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.13 E-value=0.0039 Score=33.68 Aligned_cols=42 Identities=36% Similarity=0.468 Sum_probs=36.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+..++|.|+++++|..++..+...|++|+.+++++++.+.+
T Consensus 132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 173 (305)
T cd08270 132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL 173 (305)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 478899999999999999999999999999998877665544
No 393
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.13 E-value=0.0024 Score=35.27 Aligned_cols=42 Identities=19% Similarity=0.229 Sum_probs=35.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.||.++|.|.+.-+|+.++..|.++++.|+++...-.+++
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~ 195 (284)
T PRK14170 154 QIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP 195 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999999999988765433333
No 394
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=97.12 E-value=0.0042 Score=33.93 Aligned_cols=42 Identities=29% Similarity=0.419 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+++.+|..+++.+...|.+|+.+++++++.+.+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~ 186 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL 186 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899999999999999999989999999998877654433
No 395
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.11 E-value=0.0027 Score=35.04 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=32.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
++.|+.++|.|.|.-+|+.++..|..+++.|.++..
T Consensus 153 ~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs 188 (282)
T PRK14169 153 DVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHS 188 (282)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECC
Confidence 468999999999999999999999999999988854
No 396
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.11 E-value=0.005 Score=29.09 Aligned_cols=40 Identities=25% Similarity=0.446 Sum_probs=31.8
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcC
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~ 49 (62)
++|.|. +.+|..+++.|.+.+.+|++++.+++..+...+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~ 40 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE 40 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc
Confidence 356666 7899999999999777999999998877665543
No 397
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.11 E-value=0.0034 Score=32.52 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=29.7
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++.|.| .|.+|..++..|++.|++|+.+|.+++..+.+.+
T Consensus 2 ~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~ 41 (185)
T PF03721_consen 2 KIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN 41 (185)
T ss_dssp EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT
T ss_pred EEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh
Confidence 344554 5999999999999999999999999887665543
No 398
>PLN00203 glutamyl-tRNA reductase
Probab=97.10 E-value=0.0026 Score=37.68 Aligned_cols=46 Identities=30% Similarity=0.343 Sum_probs=39.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhhhcCC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRSTAVP 50 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~~~~~ 50 (62)
+.++++++.|+ |.+|..++..|...|. +|+++.|+.++.+.+.+++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 66889999998 9999999999999996 6999999988877666543
No 399
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.10 E-value=0.0028 Score=34.99 Aligned_cols=42 Identities=19% Similarity=0.258 Sum_probs=35.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|+++...-.+++
T Consensus 154 ~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~ 195 (282)
T PRK14166 154 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS 195 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999999999998866443343
No 400
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.09 E-value=0.0038 Score=34.13 Aligned_cols=39 Identities=23% Similarity=0.342 Sum_probs=32.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++.|.|+ |.+|..++..++..|++|.+.+++++..++.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~ 42 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKA 42 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHH
Confidence 45677775 8999999999999999999999987765443
No 401
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.09 E-value=0.0039 Score=34.95 Aligned_cols=38 Identities=16% Similarity=0.186 Sum_probs=31.8
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++.|.|+ |-+|..++..++..|++|.+.+++++..+.
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 56777775 889999999999999999999998765443
No 402
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.08 E-value=0.0037 Score=32.93 Aligned_cols=40 Identities=25% Similarity=0.291 Sum_probs=33.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+.+++|+|+++ +|..+++.+...|.+|+++++++++.+.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 467899999988 9999999888899999999987765443
No 403
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.08 E-value=0.0028 Score=35.16 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=35.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|.++...-.+++
T Consensus 157 ~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~ 198 (294)
T PRK14187 157 NLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA 198 (294)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999999999988866443343
No 404
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.08 E-value=0.0027 Score=36.32 Aligned_cols=33 Identities=42% Similarity=0.435 Sum_probs=28.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q psy6647 7 RIVLVTGACSSLGETLCKELALSG-LTVVGLARR 39 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~ 39 (62)
+++++||++|.+|..+...|+.+- .+|++..|-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA 34 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRA 34 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEec
Confidence 468999999999999999988764 589998883
No 405
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=97.07 E-value=0.0047 Score=34.24 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+.+++|.|+ +++|...++.....|++|+.+++++++.+
T Consensus 165 ~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~ 203 (329)
T TIGR02822 165 PGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARR 203 (329)
T ss_pred CCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 4678999997 89999888777778999999998876654
No 406
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=97.05 E-value=0.0034 Score=34.95 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=35.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|+++...-.++++
T Consensus 164 ~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~~ 206 (299)
T PLN02516 164 PIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPES 206 (299)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH
Confidence 4679999999999999999999999999999988654333333
No 407
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.05 E-value=0.0048 Score=35.65 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=34.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+.+++++|.|. |.+|..++..+...|++|+++++++.+.
T Consensus 193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~ 231 (406)
T TIGR00936 193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRA 231 (406)
T ss_pred CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhH
Confidence 46889999996 8899999999999999999999887553
No 408
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.05 E-value=0.0046 Score=33.71 Aligned_cols=38 Identities=26% Similarity=0.351 Sum_probs=31.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.|+ |.+|..++..|.+.|++|.+.+|+++..+..
T Consensus 2 ~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~ 39 (304)
T PRK06522 2 KIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDAL 39 (304)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 4677786 8999999999999999999999976655443
No 409
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.05 E-value=0.0032 Score=34.87 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=35.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.||.++|.|.+.-+|+.++..|.++++.|+++...-.+++
T Consensus 156 ~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~ 197 (288)
T PRK14171 156 NLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS 197 (288)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999999999988764333333
No 410
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.04 E-value=0.0032 Score=34.77 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=32.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEe
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLA 37 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~ 37 (62)
++.|+.+.+.|.++-+|..++..|+++|+.|+++.
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 46899999999999999999999999999998873
No 411
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.03 E-value=0.0033 Score=35.20 Aligned_cols=34 Identities=26% Similarity=0.201 Sum_probs=29.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCC-------CeEEEEecCh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSG-------LTVVGLARRR 40 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g-------~~v~~~~r~~ 40 (62)
-++.|||++|.+|.+++..|+.++ .++++.|+++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 468999999999999999998744 5899999854
No 412
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=97.02 E-value=0.0038 Score=30.83 Aligned_cols=34 Identities=29% Similarity=0.474 Sum_probs=28.5
Q ss_pred EEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 10 LVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 10 ~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.|.|+ |.+|.-++..|.+.|++|.+++|.+ ..+.
T Consensus 2 ~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~ 35 (151)
T PF02558_consen 2 LIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEA 35 (151)
T ss_dssp EEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHH
T ss_pred EEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHh
Confidence 45565 8899999999999999999999987 5444
No 413
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=97.01 E-value=0.0064 Score=33.05 Aligned_cols=41 Identities=37% Similarity=0.436 Sum_probs=34.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+..++|+|+++++|..++..+...|.+|+.++++++..+.
T Consensus 142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~ 182 (324)
T cd08244 142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL 182 (324)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 36789999999999999999988999999999887665443
No 414
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.00 E-value=0.0041 Score=34.36 Aligned_cols=42 Identities=21% Similarity=0.183 Sum_probs=35.3
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.++++.|.++...-.+++
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~ 195 (282)
T PRK14182 154 DPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA 195 (282)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH
Confidence 467999999999999999999999999999988865433333
No 415
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=97.00 E-value=0.0059 Score=33.40 Aligned_cols=40 Identities=28% Similarity=0.400 Sum_probs=33.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++.+|..++......|.+|+.+.++++..+
T Consensus 139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4678999999999999999888889999999888765543
No 416
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=96.98 E-value=0.0057 Score=33.85 Aligned_cols=37 Identities=22% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+..+++.|.|+ |.+|..++..|.+.|++|.+..|++.
T Consensus 3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~~ 39 (313)
T PRK06249 3 SETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSDY 39 (313)
T ss_pred CcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 34456777765 99999999999999999999999763
No 417
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=96.97 E-value=0.0062 Score=32.78 Aligned_cols=40 Identities=25% Similarity=0.336 Sum_probs=34.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++++|..++..+...|++|+.++++++..+
T Consensus 139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 4678999999999999999999999999999888765443
No 418
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=96.97 E-value=0.0074 Score=32.64 Aligned_cols=41 Identities=29% Similarity=0.318 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+.+++|.|+++.+|..+++.....|++|+.+..++++.+.
T Consensus 142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 182 (320)
T cd08243 142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL 182 (320)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46789999999999999999999999999988887665443
No 419
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.97 E-value=0.0033 Score=35.41 Aligned_cols=36 Identities=28% Similarity=0.365 Sum_probs=31.3
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~ 40 (62)
++..+++|.|+ ||+|..++..|++.|. ++.++|.+.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 55678899988 9999999999999997 899998863
No 420
>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.95 E-value=0.0055 Score=35.74 Aligned_cols=39 Identities=26% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~ 43 (62)
+.++.+.+.|. |+.|.++++.|.+.|+.|.+.|++....
T Consensus 13 ~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~ 51 (473)
T PRK00141 13 ELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETAR 51 (473)
T ss_pred ccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence 45677888884 8899999999999999999999865443
No 421
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.95 E-value=0.006 Score=33.75 Aligned_cols=39 Identities=33% Similarity=0.359 Sum_probs=32.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++.|.|+ |++|.-++..|.+.|++|.+++|.++..+..
T Consensus 3 m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i 41 (305)
T PRK05708 3 MTWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLAAY 41 (305)
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHHHH
Confidence 35778886 9999999999999999999999976655544
No 422
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.94 E-value=0.0065 Score=34.89 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=36.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
..+.++|.|+ |.+|..+++.|.++|++|++++++++..+...+
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~ 272 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAE 272 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 3577888998 999999999999999999999999887665544
No 423
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=96.93 E-value=0.0079 Score=32.72 Aligned_cols=40 Identities=35% Similarity=0.401 Sum_probs=33.6
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+..++|.|+++.+|..++......|.+|+++++++++.+.
T Consensus 147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~ 186 (325)
T cd05280 147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADY 186 (325)
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 3589999999999999998888899999988887765443
No 424
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=96.92 E-value=0.0076 Score=34.02 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=34.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+..++|.|+++++|...+......|++++++++++++.+.
T Consensus 193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~ 233 (393)
T cd08246 193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY 233 (393)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence 36789999999999999998888899998888887765543
No 425
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=96.91 E-value=0.0057 Score=33.74 Aligned_cols=40 Identities=25% Similarity=0.249 Sum_probs=32.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~~ 45 (62)
.+.+++|+|+ +++|...++.+...|++ |+++++++++.+.
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~ 203 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL 203 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 4678999975 89999999988889988 9888887766543
No 426
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.0033 Score=35.68 Aligned_cols=48 Identities=21% Similarity=0.162 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhcCCCc
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKV 52 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~ 52 (62)
+...++|-|++|..|.-++++|+++|.+..+..|+..++..+...+..
T Consensus 5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~ 52 (382)
T COG3268 5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP 52 (382)
T ss_pred cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc
Confidence 345688999999999999999999999999999999988877766644
No 427
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=96.89 E-value=0.0078 Score=32.79 Aligned_cols=40 Identities=25% Similarity=0.392 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++.+|..++......|++++.+..+.+..+
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 4678999999999999999998899999988877665443
No 428
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.89 E-value=0.0082 Score=33.16 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=38.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRST 47 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~ 47 (62)
++.|+.++|.|.+.-.|+.++..|..+|+.|.++.++...+.+..
T Consensus 149 ~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~ 193 (279)
T PRK14178 149 SIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAEL 193 (279)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHH
Confidence 468999999999999999999999999999999987766555443
No 429
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.89 E-value=0.0052 Score=36.47 Aligned_cols=41 Identities=24% Similarity=0.384 Sum_probs=34.1
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
..++|.|. |.+|+.+++.|.++|++++++|.++++.++..+
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~ 458 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE 458 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 34666665 899999999999999999999999887766653
No 430
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.87 E-value=0.0023 Score=34.77 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=30.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
.++|+||++- |+.++..|.+.|++|+.+.+++..
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence 5899999887 999999999999999998887653
No 431
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.87 E-value=0.0069 Score=33.55 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=36.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHh----CCCeEEEEecChhHHHhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELAL----SGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~----~g~~v~~~~r~~~~~~~~ 46 (62)
++.||.++|.|.+.-+|+.++..|.+ +++.|..+..+...+.+.
T Consensus 154 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~ 201 (286)
T PRK14184 154 SPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE 201 (286)
T ss_pred CCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH
Confidence 46799999999999999999999998 789998887655444443
No 432
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.86 E-value=0.0035 Score=35.32 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~ 40 (62)
+++++++|.|+ |++|..++..|++.|. ++.++|++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 56778999997 8899999999999996 788898864
No 433
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=96.86 E-value=0.0087 Score=33.94 Aligned_cols=40 Identities=23% Similarity=0.256 Sum_probs=33.4
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++.+|..++..+...|++++++++++++.+
T Consensus 189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~ 228 (398)
T TIGR01751 189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE 228 (398)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence 3578999999999999999888889999888877665543
No 434
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=96.85 E-value=0.0096 Score=31.97 Aligned_cols=41 Identities=27% Similarity=0.319 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++..++|.|+++++|..++......|++|+.+++++++.+.
T Consensus 136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 176 (320)
T cd05286 136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL 176 (320)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 46789999999999999999888899999998877665443
No 435
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.85 E-value=0.005 Score=35.12 Aligned_cols=43 Identities=19% Similarity=0.161 Sum_probs=35.9
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++.||.++|.|.+.-+|+.++..|.++++.|.++...-.++++
T Consensus 228 ~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~ 270 (364)
T PLN02616 228 EIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEE 270 (364)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHH
Confidence 4689999999999999999999999999999988654333333
No 436
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=96.84 E-value=0.01 Score=32.62 Aligned_cols=40 Identities=25% Similarity=0.363 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++.+|..+++.+...|.+++.+++++++.+
T Consensus 162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3678999999999999999999999999988888765543
No 437
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.84 E-value=0.0062 Score=33.71 Aligned_cols=42 Identities=19% Similarity=0.169 Sum_probs=34.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHh--CCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELAL--SGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~--~g~~v~~~~r~~~~~~ 44 (62)
++.|+.++|.|.+.-+|+.++..|.+ +++.|.++.....+++
T Consensus 155 ~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~ 198 (284)
T PRK14193 155 ELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLA 198 (284)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHH
Confidence 46799999999999999999999998 7899988865443333
No 438
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=96.84 E-value=0.0054 Score=34.77 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=35.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
++.||.++|.|.+.-+|+.++..|.++++.|.++...-.+++
T Consensus 211 ~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~ 252 (345)
T PLN02897 211 EIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPE 252 (345)
T ss_pred CCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHH
Confidence 467999999999999999999999999999988865433333
No 439
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=96.84 E-value=0.0081 Score=32.53 Aligned_cols=39 Identities=38% Similarity=0.422 Sum_probs=31.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~ 44 (62)
.+.+++|.|+ +++|...++.+...|++ |+++++++++.+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4678889876 89999999888888986 888887766543
No 440
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=96.82 E-value=0.011 Score=32.32 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+..++|.|+++++|..++..+...|.+++++.+++++.+.
T Consensus 140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 180 (334)
T PTZ00354 140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDF 180 (334)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 46789999999999999999999999998888777665443
No 441
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=96.81 E-value=0.01 Score=32.71 Aligned_cols=40 Identities=25% Similarity=0.366 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
.+..++|.| ++.+|..++..+...|.+|+.+++++++.+.
T Consensus 163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467899999 7999999999888899999999887765443
No 442
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.81 E-value=0.0081 Score=34.85 Aligned_cols=48 Identities=27% Similarity=0.292 Sum_probs=41.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecChhHHHhhhcCCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVPK 51 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~~~~~~~~~~~~~ 51 (62)
++.++++++.|+ |-+|.-++.+|.++| .+|+++.|+.+++++++.++.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 367889999998 778899999999999 689999999999888877765
No 443
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=96.81 E-value=0.0092 Score=32.75 Aligned_cols=40 Identities=28% Similarity=0.384 Sum_probs=32.7
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhC-CCeEEEEecChhHHHh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALS-GLTVVGLARRRHRVRR 45 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r~~~~~~~ 45 (62)
+..++|.|+++++|...++..... |++|+.+..+++..+.
T Consensus 149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~ 189 (336)
T TIGR02817 149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEW 189 (336)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHH
Confidence 679999999999999988777766 9999998877655443
No 444
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=96.80 E-value=0.0056 Score=34.74 Aligned_cols=32 Identities=34% Similarity=0.377 Sum_probs=28.5
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.++|.|+ |-+|.+++.+|++.|.+|++++++.
T Consensus 3 ~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 3 HIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5778886 8899999999999999999999864
No 445
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=96.80 E-value=0.01 Score=33.07 Aligned_cols=33 Identities=36% Similarity=0.372 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEec
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r 38 (62)
.+..++|.|+ |++|...++.+...|++|+++++
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~ 204 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNR 204 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence 4678999985 99999999888888999999988
No 446
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.80 E-value=0.0094 Score=32.85 Aligned_cols=39 Identities=23% Similarity=0.359 Sum_probs=31.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++.|.|+ |.+|..++..|++.|++|++.+++++..+..
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~ 43 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERA 43 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 45666666 8899999999999999999999987665443
No 447
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=96.79 E-value=0.0085 Score=34.21 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=32.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecChhHHHhh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGL---TVVGLARRRHRVRRS 46 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~r~~~~~~~~ 46 (62)
+.+++|.|+++++|...++.+...|. +|+++++++++.+..
T Consensus 176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a 219 (410)
T cd08238 176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA 219 (410)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence 56899999999999998887666553 799999887765544
No 448
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=96.79 E-value=0.0065 Score=33.31 Aligned_cols=37 Identities=24% Similarity=0.294 Sum_probs=31.7
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
+++.|.|+ |-+|..++..|+..|++|++.+++++..+
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~ 41 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALS 41 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 45777776 89999999999999999999999887654
No 449
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.79 E-value=0.011 Score=26.28 Aligned_cols=32 Identities=31% Similarity=0.392 Sum_probs=27.1
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
++|.|+ |.+|..++..|.+.|.+|.++.+++.
T Consensus 2 vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 2 VVVIGG-GFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred EEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence 456665 99999999999999999999988643
No 450
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.78 E-value=0.01 Score=33.23 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=33.7
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhH
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHR 42 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~ 42 (62)
|...+.+++.|.|+ |.+|..++..++..|. ++++.|++++.
T Consensus 1 ~~~~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~ 42 (321)
T PTZ00082 1 MTMIKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNI 42 (321)
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCch
Confidence 44456678999994 8899999999998884 89999998764
No 451
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.78 E-value=0.0098 Score=32.46 Aligned_cols=38 Identities=29% Similarity=0.436 Sum_probs=31.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.| .|.+|..++..|.+.|++|.+.+++++..+..
T Consensus 2 ~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a 39 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERA 39 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 356666 58899999999999999999999988766544
No 452
>KOG1198|consensus
Probab=96.77 E-value=0.0082 Score=33.99 Aligned_cols=37 Identities=24% Similarity=0.279 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
.++.+++.|+++|+|...++.....++..+++.++.+
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e 193 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKE 193 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccc
Confidence 4679999999999999999988888844445544444
No 453
>PRK13243 glyoxylate reductase; Reviewed
Probab=96.77 E-value=0.0073 Score=33.93 Aligned_cols=38 Identities=16% Similarity=0.353 Sum_probs=33.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
.+.++++.|.|. |.||+.+++.+...|++|+..++++.
T Consensus 147 ~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~ 184 (333)
T PRK13243 147 DVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK 184 (333)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 367899999998 99999999999999999999988653
No 454
>PRK07236 hypothetical protein; Provisional
Probab=96.77 E-value=0.0082 Score=33.89 Aligned_cols=39 Identities=26% Similarity=0.172 Sum_probs=32.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|-.++...++|.|+ |-.|..++..|.+.|.+|.++.+.+
T Consensus 1 ~~~~~~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (386)
T PRK07236 1 MTHMSGPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSP 39 (386)
T ss_pred CCCCCCCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 44566778999997 6779999999999999999999865
No 455
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.75 E-value=0.0073 Score=32.22 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=31.7
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCC---eEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGL---TVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~---~v~~~~r~ 39 (62)
+++++++++.|+ |+.|..++..+.+.|. ++++++|+
T Consensus 22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~ 60 (226)
T cd05311 22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK 60 (226)
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence 367788999998 9999999999999996 59999998
No 456
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=96.75 E-value=0.0068 Score=33.53 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=34.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++.|+.++|.|.|.-.|+.++..|+..++.|.++...-
T Consensus 153 ~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T 190 (283)
T COG0190 153 DLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT 190 (283)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC
Confidence 46899999999999999999999999999999886644
No 457
>PRK03806 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.75 E-value=0.0073 Score=34.73 Aligned_cols=39 Identities=21% Similarity=0.270 Sum_probs=32.8
Q ss_pred CCCCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 1 m~~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
|+++.++.+.+.|. |+.|.+.++.|.++|++|.+.|..+
T Consensus 1 ~~~~~~~~i~v~G~-G~sG~s~~~~l~~~G~~v~~~D~~~ 39 (438)
T PRK03806 1 MADYQGKKVVIIGL-GLTGLSCVDFFLARGVTPRVIDTRI 39 (438)
T ss_pred CcccCCCEEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 66777888889986 7789999988999999999999754
No 458
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=96.74 E-value=0.014 Score=26.52 Aligned_cols=34 Identities=38% Similarity=0.467 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhC-CCeEEEEec
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALS-GLTVVGLAR 38 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~-g~~v~~~~r 38 (62)
+.++++.+.|. |..|..++..+.+. +.++.+.+|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 56789999998 99999999999998 577888777
No 459
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=96.73 E-value=0.012 Score=32.38 Aligned_cols=40 Identities=33% Similarity=0.312 Sum_probs=32.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhhhc
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~~~ 48 (62)
++.|.|+ |.+|..++..|++.|++|.+.+|+++..+...+
T Consensus 3 kI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~ 42 (325)
T PRK00094 3 KIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINA 42 (325)
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 4667775 899999999999999999999998776655443
No 460
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=96.72 E-value=0.015 Score=31.77 Aligned_cols=39 Identities=33% Similarity=0.361 Sum_probs=33.2
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
+.+++|.|+++.+|...++.....|++++.+..++++.+
T Consensus 147 ~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~ 185 (324)
T cd08288 147 DGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEAD 185 (324)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 568999999999999999988889999988877665544
No 461
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=96.72 E-value=0.011 Score=32.39 Aligned_cols=37 Identities=30% Similarity=0.360 Sum_probs=29.6
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.|+ |.+|..++..|.+.|++|.+.+| ++..+..
T Consensus 2 kI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~ 38 (305)
T PRK12921 2 RIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKAL 38 (305)
T ss_pred eEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHH
Confidence 3566665 99999999999999999999999 5554443
No 462
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=96.71 E-value=0.007 Score=35.66 Aligned_cols=35 Identities=26% Similarity=0.335 Sum_probs=30.4
Q ss_pred CCCCcEEEEEcC----------------CChHHHHHHHHHHhCCCeEEEEe
Q psy6647 3 RWIGRIVLVTGA----------------CSSLGETLCKELALSGLTVVGLA 37 (62)
Q Consensus 3 ~~~~~~~~itG~----------------~~gig~~~~~~l~~~g~~v~~~~ 37 (62)
++.|++++||+| ||-.|+++++.+..+|++|+++.
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~ 303 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLIS 303 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEe
Confidence 478899999977 35689999999999999999876
No 463
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=96.70 E-value=0.012 Score=33.05 Aligned_cols=40 Identities=13% Similarity=0.236 Sum_probs=32.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~ 45 (62)
.+.+++|.|+ +++|...+......|+ +|+.+++++++.+.
T Consensus 185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~ 225 (368)
T TIGR02818 185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFEL 225 (368)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 3678999975 9999999888888898 79888887766543
No 464
>PLN02740 Alcohol dehydrogenase-like
Probab=96.70 E-value=0.011 Score=33.37 Aligned_cols=41 Identities=15% Similarity=0.351 Sum_probs=32.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+ +++|...++.+...|+ +|+.+++++++.+..
T Consensus 198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 3678999985 9999999998888898 588888877665533
No 465
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=96.70 E-value=0.012 Score=31.93 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=33.9
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+.+++|.|+++.+|..+++.+...|.+++++..+++..+
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 177 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE 177 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence 4678999999999999999999999999988887765443
No 466
>KOG1221|consensus
Probab=96.69 E-value=0.0039 Score=36.59 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=29.8
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC---CeEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG---LTVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g---~~v~~~~r~ 39 (62)
+.+|.+++|||+|++|+.+.+.+++.- -++++.-|.
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~ 48 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRA 48 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEec
Confidence 468999999999999999999998854 257777663
No 467
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=96.69 E-value=0.011 Score=33.19 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=32.9
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
+.++++.|.|. |.||..++..+...|++|+..++++..
T Consensus 144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~ 181 (330)
T PRK12480 144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK 181 (330)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence 56788888886 889999999999999999999987643
No 468
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=96.69 E-value=0.017 Score=30.59 Aligned_cols=40 Identities=20% Similarity=0.234 Sum_probs=33.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++++|..+.......|++|+.+++++++.+
T Consensus 104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 4678999999999999998888888999999988766544
No 469
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.0095 Score=33.04 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=34.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhC----CCeEEEEecChhHHH
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALS----GLTVVGLARRRHRVR 44 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~----g~~v~~~~r~~~~~~ 44 (62)
++.||.++|.|.+.-+|+.++..|.++ ++.|+++.....+++
T Consensus 150 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~ 195 (287)
T PRK14181 150 PLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLT 195 (287)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHH
Confidence 468999999999999999999999998 788988865333333
No 470
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=96.67 E-value=0.0074 Score=36.98 Aligned_cols=35 Identities=29% Similarity=0.467 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCC-ChHHHHHHHHHHhCCCeEEEEec
Q psy6647 4 WIGRIVLVTGAC-SSLGETLCKELALSGLTVVGLAR 38 (62)
Q Consensus 4 ~~~~~~~itG~~-~gig~~~~~~l~~~g~~v~~~~r 38 (62)
..++.++|||++ ++|+.+++..|+..|++|+++..
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS 429 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTS 429 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcc
Confidence 457899999987 78999999999999999998754
No 471
>PRK06487 glycerate dehydrogenase; Provisional
Probab=96.67 E-value=0.0044 Score=34.57 Aligned_cols=36 Identities=17% Similarity=0.183 Sum_probs=31.8
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.+.++++.|.|. |.||+.+++.+...|++|+..++.
T Consensus 145 ~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~ 180 (317)
T PRK06487 145 ELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP 180 (317)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 367889999997 999999999999999999988875
No 472
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.66 E-value=0.0065 Score=34.58 Aligned_cols=34 Identities=35% Similarity=0.471 Sum_probs=31.2
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
+++.|.|+.|.+|..++..|.+.|+.|.+.++++
T Consensus 99 ~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 99 RPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 6789999999999999999999999999999854
No 473
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.65 E-value=0.016 Score=32.24 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=36.1
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHh----CCCeEEEEecChhHHHhh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELAL----SGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~----~g~~v~~~~r~~~~~~~~ 46 (62)
++.|+.++|.|.+.-+|+.++..|.+ ++++|..+..+...+++.
T Consensus 156 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~ 203 (295)
T PRK14174 156 ETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSY 203 (295)
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHH
Confidence 46799999999999999999999987 688998887665544443
No 474
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=96.64 E-value=0.015 Score=33.55 Aligned_cols=39 Identities=21% Similarity=0.279 Sum_probs=33.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++.|.|. |.+|..++..|++.|++|++.+++++..+.+
T Consensus 4 ~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l 42 (415)
T PRK11064 4 ETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTI 42 (415)
T ss_pred cEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 45667765 8899999999999999999999998876653
No 475
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=96.64 E-value=0.011 Score=31.30 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=35.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh-hHHHhhhc
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR-HRVRRSTA 48 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~-~~~~~~~~ 48 (62)
++.++.++|.|+ |..+..=++.|++.|++|++++-+. +.+..+.+
T Consensus 9 ~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~ 54 (210)
T COG1648 9 DLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIE 54 (210)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHH
Confidence 578999999998 7888889999999999999987654 44444433
No 476
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.64 E-value=0.0074 Score=31.61 Aligned_cols=35 Identities=31% Similarity=0.402 Sum_probs=30.1
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~ 39 (62)
+.+.+++|.|. ||+|..+++.|+..|. ++.++|.+
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 56678888885 9999999999999996 78888876
No 477
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.64 E-value=0.015 Score=32.33 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=31.4
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
++.|.|+ |.+|..++..|.+.|++|.+.+|+++..+..
T Consensus 2 kI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~~~~i 39 (326)
T PRK14620 2 KISILGA-GSFGTAIAIALSSKKISVNLWGRNHTTFESI 39 (326)
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 3667776 9999999999999999999999987655443
No 478
>PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.63 E-value=0.013 Score=34.01 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~ 41 (62)
+.++++.+.|. |+.|.+.++.|.+.|++|.+.|..+.
T Consensus 7 ~~~~~i~viG~-G~~G~~~a~~l~~~G~~v~~~D~~~~ 43 (460)
T PRK01390 7 FAGKTVAVFGL-GGSGLATARALVAGGAEVIAWDDNPA 43 (460)
T ss_pred cCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEECCChh
Confidence 55778888885 77888899999999999999997643
No 479
>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids
Probab=96.62 E-value=0.019 Score=30.77 Aligned_cols=35 Identities=23% Similarity=0.266 Sum_probs=29.5
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEE-EEec
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVV-GLAR 38 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~-~~~r 38 (62)
+++++++.|.| .|.+|..+++.|.+.|++|+ +.|.
T Consensus 28 ~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~ 63 (227)
T cd01076 28 GLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS 63 (227)
T ss_pred CccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence 36778888887 59999999999999999998 5555
No 480
>PLN02928 oxidoreductase family protein
Probab=96.60 E-value=0.011 Score=33.46 Aligned_cols=36 Identities=25% Similarity=0.465 Sum_probs=32.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~ 39 (62)
.+.++++.|.|. |.||+.+++.+...|++|+..+|+
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~ 191 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS 191 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence 367889999997 999999999999999999999886
No 481
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=96.59 E-value=0.016 Score=31.82 Aligned_cols=40 Identities=30% Similarity=0.485 Sum_probs=30.9
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
..++++++++++|...++.....|.+|+.+++++++.+.+
T Consensus 145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~ 184 (324)
T cd08291 145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL 184 (324)
T ss_pred cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4445558999999999888778899999988877655443
No 482
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.59 E-value=0.0053 Score=33.65 Aligned_cols=35 Identities=17% Similarity=0.240 Sum_probs=29.7
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCC-CeEEEEecC
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSG-LTVVGLARR 39 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g-~~v~~~~r~ 39 (62)
+.+..++|.|+ ||+|..+++.|++.| -+++++|.+
T Consensus 28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56677888887 899999999999999 578888765
No 483
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.59 E-value=0.0041 Score=33.65 Aligned_cols=38 Identities=21% Similarity=0.279 Sum_probs=30.9
Q ss_pred EEEEcCCChHHHHHHHHHHhCC----CeEEEEecChhHHHhh
Q psy6647 9 VLVTGACSSLGETLCKELALSG----LTVVGLARRRHRVRRS 46 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g----~~v~~~~r~~~~~~~~ 46 (62)
+.|.|++|.+|..++..++..+ .++++.|++++.++..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~ 42 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGV 42 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHH
Confidence 3578988899999999999888 6899999987655433
No 484
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=96.58 E-value=0.016 Score=32.29 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=31.3
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHh-C-CCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELAL-S-GLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~-~-g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|+|+ |++|...+..+.. . +.+|+++++++++.+..
T Consensus 163 ~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a 205 (341)
T cd08237 163 DRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLF 205 (341)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH
Confidence 3678999995 9999998877665 4 46798999887765543
No 485
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=96.58 E-value=0.02 Score=32.20 Aligned_cols=40 Identities=18% Similarity=0.318 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~~~~~~ 45 (62)
.+.+++|.| ++++|...++.+...|+ +|+.+++++++.+.
T Consensus 186 ~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~ 226 (368)
T cd08300 186 PGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFEL 226 (368)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH
Confidence 367899997 58999999988888898 69888888776553
No 486
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=96.57 E-value=0.0081 Score=35.53 Aligned_cols=38 Identities=26% Similarity=0.325 Sum_probs=33.0
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
+++-|.|+ |-.|..++..++..|+.|++.+++++.++.
T Consensus 6 ~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~e~l~~ 43 (503)
T TIGR02279 6 VTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRAEALAR 43 (503)
T ss_pred cEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 55777776 899999999999999999999999887654
No 487
>KOG1204|consensus
Probab=96.56 E-value=0.0041 Score=33.61 Aligned_cols=28 Identities=18% Similarity=0.341 Sum_probs=22.0
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSG 30 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g 30 (62)
-..++.+++||+++|||..++..+..++
T Consensus 3 ~~~r~villTGaSrgiG~~~v~~i~aed 30 (253)
T KOG1204|consen 3 LNMRKVILLTGASRGIGTGSVATILAED 30 (253)
T ss_pred cccceEEEEecCCCCccHHHHHHHHhcc
Confidence 3467899999999999988777665543
No 488
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=96.55 E-value=0.022 Score=31.43 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~ 44 (62)
.+..++|.|+++++|..++..+...|.+|+.+.+++++.+
T Consensus 165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 4678999999999999999999999999999988766544
No 489
>PLN00106 malate dehydrogenase
Probab=96.55 E-value=0.015 Score=32.73 Aligned_cols=35 Identities=20% Similarity=0.202 Sum_probs=30.5
Q ss_pred CcEEEEEcCCChHHHHHHHHHHhCC--CeEEEEecCh
Q psy6647 6 GRIVLVTGACSSLGETLCKELALSG--LTVVGLARRR 40 (62)
Q Consensus 6 ~~~~~itG~~~gig~~~~~~l~~~g--~~v~~~~r~~ 40 (62)
++++.|+|++|.+|..++..++.++ .++.++|+++
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~ 54 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN 54 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 4689999999999999999998765 4799999876
No 490
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=96.54 E-value=0.017 Score=32.43 Aligned_cols=37 Identities=24% Similarity=0.284 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhH
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~ 42 (62)
.+.+++|.| ++++|...++.....|++|++++.+.++
T Consensus 183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~ 219 (360)
T PLN02586 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNK 219 (360)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 467888866 4999999998888889998887765543
No 491
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=96.53 E-value=0.013 Score=34.75 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=33.4
Q ss_pred cEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 7 ~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
+++-|.|+ |-.|..++..++..|+.|++.+++++.++..
T Consensus 8 ~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e~l~~~ 46 (507)
T PRK08268 8 ATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAGAAAAA 46 (507)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 55777776 8899999999999999999999998876653
No 492
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.52 E-value=0.021 Score=33.70 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=30.8
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~ 45 (62)
++-+.| +|-+|..++..|+..|++|.+.+++++..+.
T Consensus 6 kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~ 42 (495)
T PRK07531 6 KAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERI 42 (495)
T ss_pred EEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHH
Confidence 455555 5999999999999999999999998876544
No 493
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.013 Score=32.71 Aligned_cols=37 Identities=22% Similarity=0.290 Sum_probs=32.4
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhC----CCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALS----GLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~----g~~v~~~~r~ 39 (62)
++.|+.++|.|.+.-+|+.++..|.++ ++.|.++...
T Consensus 158 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~ 198 (297)
T PRK14168 158 ETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTR 198 (297)
T ss_pred CCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCC
Confidence 467999999999999999999999988 7889887653
No 494
>PRK08328 hypothetical protein; Provisional
Probab=96.51 E-value=0.011 Score=31.66 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=29.5
Q ss_pred CCCcEEEEEcCCChHHHHHHHHHHhCCC-eEEEEecCh
Q psy6647 4 WIGRIVLVTGACSSLGETLCKELALSGL-TVVGLARRR 40 (62)
Q Consensus 4 ~~~~~~~itG~~~gig~~~~~~l~~~g~-~v~~~~r~~ 40 (62)
+++.+++|.|+ ||+|.+++..|++.|. ++.++|.+.
T Consensus 25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 45677888887 8999999999999985 688887653
No 495
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=96.51 E-value=0.021 Score=33.99 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=35.1
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecChhHHHhh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRS 46 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~~~~~~~ 46 (62)
.+.+++|.|+ |.+|...+..+...|++|+++|+++++.+..
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a 204 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV 204 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 4678999997 9999999999999999999999998776543
No 496
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.014 Score=32.58 Aligned_cols=37 Identities=24% Similarity=0.234 Sum_probs=32.2
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhC----CCeEEEEecC
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALS----GLTVVGLARR 39 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~----g~~v~~~~r~ 39 (62)
++.|+.++|.|.+.-+|+.++..|.++ ++.|.++...
T Consensus 154 ~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~ 194 (297)
T PRK14167 154 DTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR 194 (297)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC
Confidence 468999999999999999999999987 7889887543
No 497
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=96.49 E-value=0.019 Score=32.09 Aligned_cols=40 Identities=20% Similarity=0.381 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCChHHHHHHHHHHhCCCe-EEEEecChhHHHh
Q psy6647 5 IGRIVLVTGACSSLGETLCKELALSGLT-VVGLARRRHRVRR 45 (62)
Q Consensus 5 ~~~~~~itG~~~gig~~~~~~l~~~g~~-v~~~~r~~~~~~~ 45 (62)
.+.+++|.|+ +++|...++.....|++ |+.+++++++.+.
T Consensus 176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~ 216 (358)
T TIGR03451 176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEW 216 (358)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 3678999974 99999998888888985 8888887766543
No 498
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.49 E-value=0.0096 Score=33.11 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=29.1
Q ss_pred EEEEEcCCChHHHHHHHHHHhCCC--eEEEEecCh
Q psy6647 8 IVLVTGACSSLGETLCKELALSGL--TVVGLARRR 40 (62)
Q Consensus 8 ~~~itG~~~gig~~~~~~l~~~g~--~v~~~~r~~ 40 (62)
++.|.|++|.+|..++..++..|. +|+++++++
T Consensus 2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 588999999999999999999885 499999854
No 499
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=96.48 E-value=0.016 Score=32.35 Aligned_cols=37 Identities=19% Similarity=0.203 Sum_probs=32.6
Q ss_pred CCCCcEEEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 3 RWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 3 ~~~~~~~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
.+.++++-|.|- |.||+.+++.+...|++|+..++..
T Consensus 142 ~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 142 EIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence 467899999997 9999999999999999999988753
No 500
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=96.48 E-value=0.011 Score=33.06 Aligned_cols=31 Identities=42% Similarity=0.527 Sum_probs=27.5
Q ss_pred EEEEcCCChHHHHHHHHHHhCCCeEEEEecCh
Q psy6647 9 VLVTGACSSLGETLCKELALSGLTVVGLARRR 40 (62)
Q Consensus 9 ~~itG~~~gig~~~~~~l~~~g~~v~~~~r~~ 40 (62)
++|.|+ |-+|.+++..|+++|.+|.++++..
T Consensus 6 v~IIGg-Gi~G~s~A~~L~~~g~~V~lie~~~ 36 (376)
T PRK11259 6 VIVIGL-GSMGSAAGYYLARRGLRVLGLDRFM 36 (376)
T ss_pred EEEECC-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence 677886 8899999999999999999999864
Done!