RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy6647
(62 letters)
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 60.7 bits (148), Expect = 3e-13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
M+RW R+ LVTGA +G + + L GL VVG AR +
Sbjct: 27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI 69
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 43.8 bits (104), Expect = 3e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
+ + +TGA S GE + A +G ++V RR R
Sbjct: 16 RGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREER 57
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP;
2.60A {Saccharomyces cerevisiae}
Length = 287
Score = 43.0 bits (102), Expect = 5e-07
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLT---VVGLARRRHR 42
+R + VL+TGA + +G+ E + ++ ARR +
Sbjct: 28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK 72
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 43.0 bits (102), Expect = 6e-07
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
+ ++V++TGA S +GE + + + G ++ LARR R
Sbjct: 12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER 52
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 42.9 bits (102), Expect = 6e-07
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
+++L+TGA +GE + +EL ++G ++ ARR+ R
Sbjct: 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQAR 40
>2jah_A Clavulanic acid dehydrogenase; short-chain
dehydrogenase/reductase, lactamase inhibitor, AN
biosynthesis, NADPH, oxidoreductase; HET: MSE NDP;
1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Length = 247
Score = 42.9 bits (102), Expect = 7e-07
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
G++ L+TGA S +GE + LA G V ARR +
Sbjct: 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEK 43
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 41.7 bits (99), Expect = 2e-06
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
++ ++TGA +GE + + LA G + AR R
Sbjct: 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDR 38
>2ehd_A Oxidoreductase, oxidoreductase, short-chain
dehydrogenase/reducta; rossman fold, structural
genomics, NPPSFA; 2.40A {Thermus thermophilus}
Length = 234
Score = 41.4 bits (98), Expect = 2e-06
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
M+ + VL+TGA +GE + L G V +AR R
Sbjct: 1 MEG-MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKR 41
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family,
rossmann-fold, short-chain dehydrogenase/reducta
ALLO-threonine dehydrogenase; 1.90A {Escherichia coli}
PDB: 3asv_A*
Length = 248
Score = 41.4 bits (98), Expect = 2e-06
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
IVLVTGA + GE + + G V+ RR+ R
Sbjct: 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQER 36
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 41.5 bits (98), Expect = 2e-06
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
G+ V+VTGA +G + LA G VV AR + +++
Sbjct: 28 GKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQK 67
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 41.0 bits (97), Expect = 3e-06
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
+ ++TGA +G + LA G VV +AR +
Sbjct: 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQN 43
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 40.7 bits (95), Expect = 4e-06
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
R +VTG +G +CK+L+ +G+ VV R +
Sbjct: 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTK 48
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative;
1.87A {Rhodopseudomonas palustris}
Length = 252
Score = 40.3 bits (95), Expect = 6e-06
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
V V GA +G + K+ A G TV R ++
Sbjct: 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAP 46
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo
sapiens} SCOP: c.2.1.2
Length = 272
Score = 39.2 bits (92), Expect = 1e-05
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
G IVL+TGA +G E A +V +H +
Sbjct: 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEE 70
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 39.1 bits (92), Expect = 1e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
++VTGA S LG L L G V + RR R+++
Sbjct: 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQ 42
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 39.1 bits (92), Expect = 2e-05
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
M G++ +VTGA +G + ++L G VV AR +
Sbjct: 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK 65
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 38.4 bits (90), Expect = 2e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
M + +I +VTGA S +G + LA +G V RR ++
Sbjct: 23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQ 66
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A*
1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 38.4 bits (90), Expect = 3e-05
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
MD + V+ A +G +EL L + R
Sbjct: 1 MD-LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38
>3e9n_A Putative short-chain dehydrogenase/reductase; structural
genomics, unknown function, oxidoreductase, PSI- 2;
2.40A {Corynebacterium glutamicum}
Length = 245
Score = 38.3 bits (90), Expect = 3e-05
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
+I +VTGA +G + K+L+ V L R +
Sbjct: 5 KKIAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHL 41
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 37.9 bits (89), Expect = 3e-05
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
++++TGA S LG L K G R +
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESK 37
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 37.9 bits (89), Expect = 4e-05
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+ GR++LVTGA +G + A G +VV L R
Sbjct: 9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRT 47
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 37.1 bits (87), Expect = 8e-05
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
RI+LVTGA +G A G TV+ L R
Sbjct: 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRN 45
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 36.6 bits (85), Expect = 1e-04
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 6 GRIVLVTGACSSLGETLCKELA---LSGLTVVGLARRRHR 42
+ ++TGA G L +LA G ++ AR
Sbjct: 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESM 45
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 36.5 bits (85), Expect = 1e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
M + LVTGA S +G + + L GL V AR
Sbjct: 17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE 56
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 36.1 bits (84), Expect = 2e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+ VTG S +G + + LA G+ V G AR
Sbjct: 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARD 57
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 35.9 bits (83), Expect = 2e-04
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
+I+L+TGA S G + LA +G V R S
Sbjct: 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNV 47
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 36.0 bits (84), Expect = 2e-04
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
+ +VTG S +G + L +G V AR R+R + +
Sbjct: 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAES 50
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 35.9 bits (84), Expect = 2e-04
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
GR+ LVTG LG + + LA +G +VV +R +
Sbjct: 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ 63
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 36.0 bits (84), Expect = 2e-04
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
+R + LVTGA S +G + LA G TV R
Sbjct: 2 QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR 41
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 35.3 bits (82), Expect = 3e-04
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
GRI LVTG + +G + + L+ G +VV RR + +
Sbjct: 28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAG 75
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 35.1 bits (82), Expect = 3e-04
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
GR VLVTGA +G + L +G VV ++R +
Sbjct: 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative,
joint CE structural genomics; HET: NAD; 2.50A
{Thermotoga maritima} SCOP: c.2.1.2
Length = 249
Score = 35.2 bits (82), Expect = 3e-04
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
+ VLV A +G + L+ G V AR ++RS
Sbjct: 19 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH 61
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 35.3 bits (82), Expect = 4e-04
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP--KVEFYH 56
R V++TGA S LG +ELA G TV+ R + + +VE
Sbjct: 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRE 68
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 35.2 bits (81), Expect = 4e-04
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
G+ +V +G LA G VV R+ + +
Sbjct: 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQA 158
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase;
HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 35.2 bits (82), Expect = 4e-04
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
G LVTGA +G K L SG VV + R +
Sbjct: 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS 46
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides}
PDB: 2wdz_A* 3lqf_A*
Length = 254
Score = 35.2 bits (82), Expect = 4e-04
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G VTGA S +G +C+ A SG ++ + R + R+
Sbjct: 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQ 53
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 34.8 bits (81), Expect = 4e-04
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G++ LVTGA +G+ + + LA G V+G A
Sbjct: 9 GKVALVTGASRGIGKAIAELLAERGAKVIGTATS 42
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A
{Burkholderia pseudomallei 1710B}
Length = 269
Score = 34.8 bits (81), Expect = 4e-04
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
R+ VTG LG + + L +G+ V R
Sbjct: 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSER 59
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 34.8 bits (81), Expect = 4e-04
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G+ L+TGA +G + + A +G +V R + +
Sbjct: 20 GKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARR 62
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 35.1 bits (81), Expect = 5e-04
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
+ + GR VTG + +G L ++L G V R+ + ++ A
Sbjct: 3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALA 50
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 34.8 bits (81), Expect = 5e-04
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
G+ LVTG+ LG + LA +G V+ R +
Sbjct: 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLL 46
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 34.9 bits (81), Expect = 6e-04
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
++ LVTGA +G + K LA S V+ ++R +
Sbjct: 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ 78
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta
protein, NAD(P)-binding rossmann fold, csgid,
oxidoreductase; 1.95A {Francisella tularensis subsp}
Length = 247
Score = 34.8 bits (81), Expect = 6e-04
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
++ LVTGA +G + LA G TVVG A
Sbjct: 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATS 38
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 34.4 bits (80), Expect = 6e-04
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
M R G+ +LVTGA S +G A G ++V + R
Sbjct: 1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDRE 39
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 34.6 bits (80), Expect = 6e-04
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+ +LV G +LG + K + + R
Sbjct: 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFR 55
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A
{Burkholderia pseudomallei}
Length = 270
Score = 34.4 bits (80), Expect = 6e-04
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
++ +VTGA +G + ELA G V+G A
Sbjct: 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTE 62
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 34.5 bits (80), Expect = 6e-04
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50
M + G++ LVTGA +G + L +G V R + +P
Sbjct: 23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLHLP 72
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative,
EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia
cavernae}
Length = 273
Score = 34.1 bits (79), Expect = 8e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
GR +VTGA S +G + A +G V+ R
Sbjct: 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 34.1 bits (79), Expect = 9e-04
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
GR LVTGA +GE + + G V R
Sbjct: 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTR 60
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 34.0 bits (79), Expect = 9e-04
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVG 35
RI VTG +G ++C+ L G VV
Sbjct: 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVA 42
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 34.1 bits (79), Expect = 9e-04
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+ G+ V VTGA +G +G V G +
Sbjct: 2 HMDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA 40
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc;
2.45A {Sinorhizobium meliloti}
Length = 260
Score = 34.1 bits (79), Expect = 0.001
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
M R ++V++TGA +G L + VV +R
Sbjct: 23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS 61
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 34.0 bits (79), Expect = 0.001
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G+ L+TGA S +G + + L G V+
Sbjct: 14 GKTSLITGASSGIGSAIARLLHKLGSKVIISGSN 47
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 34.0 bits (79), Expect = 0.001
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
G++ LVTG+ +G + ++LA +G TV+
Sbjct: 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG 41
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 33.7 bits (78), Expect = 0.001
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
++V+++G +LG TL + A G +V AR R+
Sbjct: 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLED 50
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 33.7 bits (78), Expect = 0.001
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
M GR V+VTG +G + A +G V R
Sbjct: 5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRST 44
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas;
oxidoreductase; 1.99A {Streptomyces coelicolor}
Length = 253
Score = 33.7 bits (78), Expect = 0.001
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50
R VLVTG +G + + A +G V R AV
Sbjct: 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLAVK 65
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 33.7 bits (78), Expect = 0.001
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G+ L+TGA + +G+ + A +G V AR
Sbjct: 32 GKRALITGASTGIGKKVALAYAEAGAQVAVAARH 65
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 33.7 bits (78), Expect = 0.001
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G+ LVTG+ + +G+ + L G V+ RR V +
Sbjct: 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIK 52
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 33.4 bits (77), Expect = 0.002
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 5 IGRIVLVTGACSSLGETLCKELALSG--LTVVGLARR 39
+G+++LVTG +G+++ L V G+AR
Sbjct: 1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS 37
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 33.3 bits (77), Expect = 0.002
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
G++ +TG + LG+ + L+ G V +R+ +
Sbjct: 26 GKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVL 63
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 33.3 bits (77), Expect = 0.002
Identities = 13/45 (28%), Positives = 17/45 (37%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVP 50
R VLVTG +G + + LA G V R + V
Sbjct: 15 SRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVE 59
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 33.4 bits (77), Expect = 0.002
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G++ +VTGA +G T+ + A G TVV +
Sbjct: 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVD 246
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus
suis} PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 33.0 bits (76), Expect = 0.002
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
G+I LVTGA +G + A +G T+V +
Sbjct: 34 GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQ 68
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A
{Pseudomonas aeruginosa}
Length = 342
Score = 33.0 bits (76), Expect = 0.002
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
V GA LG + + +G +V + R +++R
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR 52
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 33.0 bits (76), Expect = 0.002
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G++ +VTGA +G + +L +G TV R
Sbjct: 5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRH 38
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 33.0 bits (76), Expect = 0.002
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA +G + L L G V
Sbjct: 2 AHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVA 35
>3tjr_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium
subsp}
Length = 301
Score = 33.1 bits (76), Expect = 0.002
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ + GR +VTG S +G E A G +V
Sbjct: 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLV 59
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 33.0 bits (76), Expect = 0.002
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
M R VLVTG +G + A +G V AR
Sbjct: 36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP 75
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 32.9 bits (76), Expect = 0.002
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVEFY 55
+ VL+TGA +G + A G +V +R +
Sbjct: 5 DKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV 54
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 32.9 bits (76), Expect = 0.002
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
++V+VTGA +G + + G V+
Sbjct: 3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVI 36
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5
P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A*
3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 32.7 bits (75), Expect = 0.002
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 6 GRIVLVTGACSSLGETLCKELA-LSGLTVVGLARRRHR 42
+ LVTG +G + ++L L VV AR R
Sbjct: 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTR 41
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 32.9 bits (76), Expect = 0.003
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M+ + ++ +VTG S +G + L G VV
Sbjct: 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVV 42
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP
COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 32.6 bits (75), Expect = 0.003
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
++ +TG S +G + + G V +R RV +
Sbjct: 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAAR 69
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 32.6 bits (75), Expect = 0.003
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
++ LVTGA S G + + +G TV+G ARR +
Sbjct: 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALD 43
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd;
NAD(P)-binding, structural genomics, PSI-biology; HET:
MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 32.9 bits (76), Expect = 0.003
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M R G+ L+TG+ +G + G TV
Sbjct: 3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVA 36
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes,
fatty acid synthesis, short-chain
dehydrogenases/reductases, structural genomics; HET:
ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Length = 303
Score = 32.6 bits (75), Expect = 0.003
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
G++ +VTG + +G+ + KEL G VV +R+ R++
Sbjct: 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLK 56
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 32.6 bits (75), Expect = 0.003
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
M + L+TGA S +G LA G+TV L R
Sbjct: 23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRT 61
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 32.5 bits (75), Expect = 0.003
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G++ +VT S LG ELA +G ++ +R R ++ + +
Sbjct: 7 GKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS 49
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 32.4 bits (75), Expect = 0.003
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
G+ +VTG+ LG+ + +L G +V
Sbjct: 5 GKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPA 39
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium
loti} PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 32.5 bits (75), Expect = 0.003
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
G+ LVTGA +G+ + LA G TV+
Sbjct: 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINA 40
>3ak4_A NADH-dependent quinuclidinone reductase; SDR,
(R)-3-quinuclidinol, chiral alcohol, oxidoreductase;
HET: NAD; 2.00A {Agrobacterium tumefaciens}
Length = 263
Score = 32.5 bits (75), Expect = 0.003
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
+ GR +VTG +G + + L +G TV +
Sbjct: 7 IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQ 50
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 32.5 bits (75), Expect = 0.004
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+ +VTGA + +G + A +G +VV +
Sbjct: 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLK 45
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 32.1 bits (74), Expect = 0.004
Identities = 8/34 (23%), Positives = 14/34 (41%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
R L+T LG+ + ++L G +V
Sbjct: 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHS 40
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent
reductase, short chain dehydrogenase/reductase,
oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter
frateurii} PDB: 3ai2_A* 3ai1_A*
Length = 263
Score = 32.1 bits (74), Expect = 0.004
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G++ ++TG+ S +G + + A G +V +AR+ R+ +
Sbjct: 7 GKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAAR 49
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 32.1 bits (74), Expect = 0.004
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
++V+VTGA S +G + K+ AL+ VV +
Sbjct: 2 YQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELL 40
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase,
oxidoreductase, SDR, cardenolides, cardiac glycosides;
HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Length = 364
Score = 32.4 bits (73), Expect = 0.004
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 7 RIVLVTGACSSLGETLCKELALSGL-----TVVGLARRR 40
+ L+ G +G +L + L L+ V G+ARR
Sbjct: 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRT 40
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus
SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 32.1 bits (74), Expect = 0.004
Identities = 6/34 (17%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
R ++ ++TG + +G + + A+ G +
Sbjct: 2 TQRLKDKLAVITGGANGIGRAIAERFAVEGADIA 35
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 32.1 bits (74), Expect = 0.004
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
R+ +VTG ++G LA +G V+ ++
Sbjct: 13 NRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVE 55
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 32.2 bits (74), Expect = 0.005
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
GRI LVTG +G+ + + L +G V AR
Sbjct: 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARD 62
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 32.2 bits (73), Expect = 0.005
Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Query: 3 RWIGRIVLVTGACS-SLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVEFY 55
+ + VL+TGA S+G + + L G VV R + ++Y
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTT---SRFSKQV----TDYY 519
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane
alkaloid biosynthesis, reduction of tropinone to
pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium}
SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 32.1 bits (74), Expect = 0.005
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G LVTG +G + +ELA G +V +R
Sbjct: 9 GCTALVTGGSRGIGYGIVEELASLGASVYTCSRN 42
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short
chain dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 31.9 bits (73), Expect = 0.005
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
I++++G + +G K L +G +VG+ R V
Sbjct: 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV 38
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 31.7 bits (73), Expect = 0.005
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G LVTG +G + +ELA G V +R
Sbjct: 21 GTTALVTGGSKGIGYAIVEELAGLGARVYTCSRN 54
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 32.0 bits (73), Expect = 0.005
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
++V++TGA LG+ E A G VV
Sbjct: 8 DKVVIITGAGGGLGKYYSLEFAKLGAKVV 36
Score = 24.3 bits (53), Expect = 3.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
++VL+TGA + LG+ K A G VV
Sbjct: 317 TVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVV 350
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2
PDB: 2q45_A
Length = 266
Score = 31.7 bits (73), Expect = 0.006
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 1 MDRW--IGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
RW + VLVTG +G + +E A G + AR
Sbjct: 7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARN 47
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 31.8 bits (73), Expect = 0.006
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHR 42
G++ VTG+ +G + + A +G V
Sbjct: 34 GKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPA 70
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET:
NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 31.7 bits (73), Expect = 0.006
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M + G+ VLVTG +G + + A G V
Sbjct: 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVA 34
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 31.7 bits (73), Expect = 0.006
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
R+ R+VL+TG S LG LA G +
Sbjct: 8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLS 41
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium
meliloti}
Length = 280
Score = 31.7 bits (73), Expect = 0.006
Identities = 16/45 (35%), Positives = 21/45 (46%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
M R G+I +VTGA S +G A G VV AR + +
Sbjct: 3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAE 47
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 31.7 bits (73), Expect = 0.006
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
++ +VTG+ +G+ + LA G VV
Sbjct: 9 NKVGIVTGSGGGIGQAYAEALAREGAAVV 37
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 31.7 bits (73), Expect = 0.006
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
G++V++TG+ + LG+++ A VV
Sbjct: 2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVV 35
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 31.5 bits (72), Expect = 0.007
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ + ++TG+ S +G + + LA +G +V
Sbjct: 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIV 53
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet
of seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 31.8 bits (73), Expect = 0.007
Identities = 8/34 (23%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M R+ ++ ++TG+ + +G A G V
Sbjct: 1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVT 34
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 31.5 bits (72), Expect = 0.007
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
V+VTGA +G L ++L +A R
Sbjct: 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR 37
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding
domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter
oxydans} SCOP: c.2.1.2
Length = 262
Score = 31.4 bits (72), Expect = 0.007
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA ++G LA G +
Sbjct: 7 GKVCLVTGAGGNIGLATALRLAEEGTAIA 35
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 31.4 bits (72), Expect = 0.007
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ +VTG+ S +G + LA G +V
Sbjct: 4 GKVAVVTGSTSGIGLGIATALAAQGADIV 32
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 31.4 bits (72), Expect = 0.007
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
R LVTG S +G+ + L +G +V+ + R
Sbjct: 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRN 44
>3qlj_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 31.6 bits (72), Expect = 0.007
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M GR+V+VTGA +G A G VV
Sbjct: 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVV 55
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 31.4 bits (72), Expect = 0.008
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M R+ + V++TG+ + +G T A G V
Sbjct: 1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVT 34
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 31.4 bits (72), Expect = 0.008
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
+ ++VTG +G + +A +G V + R
Sbjct: 14 NKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA 48
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 31.4 bits (72), Expect = 0.008
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
RI LVTGA +G + ELA +G V
Sbjct: 28 DRIALVTGASRGIGRAIALELAAAGAKVA 56
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 31.4 bits (72), Expect = 0.008
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G+ LVTG+ S +G + + LA +G +V
Sbjct: 4 GKTALVTGSTSGIGLGIAQVLARAGANIV 32
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent
epimerase/dehydratase, LMR162, NESG, structural
genomics, PSI-2; 2.73A {Listeria monocytogenes}
Length = 221
Score = 31.5 bits (71), Expect = 0.008
Identities = 7/40 (17%), Positives = 16/40 (40%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
+ + GA G + +E G V + R ++ ++
Sbjct: 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHK 42
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 31.3 bits (72), Expect = 0.008
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49
R LVTG +G + + L G V +R +S
Sbjct: 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGA 45
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 31.4 bits (72), Expect = 0.009
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
G + L+TG S LG L G V L + R+R
Sbjct: 5 GEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRE 44
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 31.4 bits (72), Expect = 0.009
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 5 IGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ ++ +VTG +G + ++LA G +
Sbjct: 1 MSKVAMVTGGAQGIGRGISEKLAADGFDIA 30
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 31.3 bits (72), Expect = 0.009
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+ LVTGA +G ++ +LA G V
Sbjct: 4 TKSALVTGASRGIGRSIALQLAEEGYNVA 32
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus
anthracis}
Length = 246
Score = 31.3 bits (72), Expect = 0.010
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA +G + +LA G VV
Sbjct: 4 GKVALVTGASRGIGRAIAIDLAKQGANVV 32
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 31.3 bits (71), Expect = 0.010
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
GR+ +VTGA + LG A G VV
Sbjct: 19 GRVAVVTGAGAGLGREYALLFAERGAKVV 47
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 31.1 bits (71), Expect = 0.010
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+VTGA +G + +L +G VV
Sbjct: 23 APAAVVTGAAKRIGRAIAVKLHQTGYRVV 51
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural
genomics, PSI-2, protein structure initiative; HET:
NDP; 1.78A {Lactobacillus casei atcc 334}
Length = 224
Score = 31.1 bits (70), Expect = 0.010
Identities = 8/41 (19%), Positives = 13/41 (31%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49
+ V GA G + E G V+ + R +
Sbjct: 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGA 43
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 31.0 bits (71), Expect = 0.010
Identities = 10/43 (23%), Positives = 17/43 (39%), Gaps = 7/43 (16%)
Query: 7 RIVLVTGACSSLGETLCKELALSG-------LTVVGLARRRHR 42
I+L+TGA +G + E A + +V +R
Sbjct: 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAAD 45
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 31.0 bits (71), Expect = 0.011
Identities = 11/48 (22%), Positives = 18/48 (37%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G+ VL+TG+ +G + A +G V R+ T
Sbjct: 2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETI 49
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 31.2 bits (71), Expect = 0.011
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELA 27
LV G S+G+ + KE+
Sbjct: 35 QSRFLVLGGAGSIGQAVTKEIF 56
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 31.1 bits (71), Expect = 0.011
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ ++ G +V+G LGE + L GL VV
Sbjct: 25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVV 58
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 30.9 bits (71), Expect = 0.011
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 5 IGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ R+ +VTGA S G + G V
Sbjct: 1 MSRVAIVTGASSGNGLAIATRFLARGDRVA 30
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 30.8 bits (70), Expect = 0.012
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
GR+VLVTGA LG A G VV
Sbjct: 9 GRVVLVTGAGGGLGRAYALAFAERGALVV 37
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 30.9 bits (71), Expect = 0.012
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+ LVTG+ +G+ LA +G +V
Sbjct: 4 NKCALVTGSSRGVGKAAAIRLAENGYNIV 32
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 31.0 bits (71), Expect = 0.012
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
M + + +VTG +G + + LA SG +
Sbjct: 24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGD 63
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 31.0 bits (71), Expect = 0.012
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
R+ +VTGA S LG + + LA G TV+
Sbjct: 7 SRVFIVTGASSGLGAAVTRMLAQEGATVL 35
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 31.0 bits (71), Expect = 0.013
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ R+ R ++V GA +G A G VV
Sbjct: 3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVV 36
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 31.0 bits (71), Expect = 0.013
Identities = 12/45 (26%), Positives = 18/45 (40%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
R +I ++TGA S +G K G V RR+ +
Sbjct: 24 TQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDA 68
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 30.9 bits (70), Expect = 0.013
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G V +TGA +G+ + + A G +V A+
Sbjct: 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKT 78
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 30.8 bits (70), Expect = 0.013
Identities = 8/36 (22%), Positives = 12/36 (33%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41
R VLV G +LG + V + +
Sbjct: 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins
(A/B), NAD(P)-binding rossmann-fold structural
genomics, NPPSFA; HET: NAP; 2.20A {Thermus
thermophilus}
Length = 207
Score = 30.6 bits (70), Expect = 0.013
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
VL+TGA LG + L G ++ RR +
Sbjct: 3 VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAE 37
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 30.6 bits (70), Expect = 0.014
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
+L+TGA +G L G V+ R
Sbjct: 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRT 60
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 30.7 bits (70), Expect = 0.014
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+ +VTG S LG K L +G VV
Sbjct: 9 DAVAVVTGGASGLGLATTKRLLDAGAQVV 37
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 30.6 bits (70), Expect = 0.015
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
++ ++TGAC +G + LA +G VV
Sbjct: 6 TAELENKVAIITGACGGIGLETSRVLARAGARVV 39
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 30.7 bits (70), Expect = 0.016
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G + ++TG S LG + L G + V
Sbjct: 12 GLVAVITGGASGLGLATAERLVGQGASAV 40
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 30.6 bits (70), Expect = 0.017
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+++++ G +LG K AL + +V
Sbjct: 11 NKVIVIAGGIKNLGALTAKTFALESVNLV 39
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase;
HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2
PDB: 2hsd_A*
Length = 254
Score = 30.5 bits (70), Expect = 0.017
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 2 DRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ G+ V++TG LG ++ +G VV
Sbjct: 1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVV 33
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 30.5 bits (70), Expect = 0.018
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
++ LVT + +G + + LA G VV +R+
Sbjct: 9 RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRK 47
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB:
3vc7_A
Length = 255
Score = 30.2 bits (69), Expect = 0.018
Identities = 10/48 (20%), Positives = 17/48 (35%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
M + G+ +V G +G + L G V+ R + R
Sbjct: 3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE 50
>3imf_A Short chain dehydrogenase; structural genomics, infectious D
center for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 30.2 bits (69), Expect = 0.019
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
++V++TG S +G+ + A G VV R + ++
Sbjct: 6 EKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKL 43
>3gvc_A Oxidoreductase, probable short-chain type
dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG,
SBRI, structural genomics; 2.45A {Mycobacterium
tuberculosis}
Length = 277
Score = 30.2 bits (69), Expect = 0.019
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ +VTGA + +G + + LA G V+
Sbjct: 24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVL 57
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 30.3 bits (69), Expect = 0.019
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M R+ G+ V++TG+ + +G + A G V
Sbjct: 21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVT 54
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 30.2 bits (69), Expect = 0.020
Identities = 10/56 (17%), Positives = 23/56 (41%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVEFYH 56
M R G+++++T A +G+ A G V+ +++ P ++
Sbjct: 1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRV 56
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 30.2 bits (69), Expect = 0.021
Identities = 7/34 (20%), Positives = 10/34 (29%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
+VT G L+ +G TV
Sbjct: 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESF 35
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 30.3 bits (69), Expect = 0.021
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRH 41
V+V G +LG + + +G TV+ + +
Sbjct: 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN 38
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 30.1 bits (68), Expect = 0.021
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
+++ GA +G L E G V + R +++
Sbjct: 7 IVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIK 42
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 30.2 bits (69), Expect = 0.022
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
R V+VTG +G+ +C + +G V +
Sbjct: 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural
genomics, APC7755, NADP, P protein structure
initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Length = 236
Score = 30.0 bits (68), Expect = 0.023
Identities = 11/45 (24%), Positives = 15/45 (33%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVE 53
VLV GA + L EL G V + R + +
Sbjct: 24 VLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASD 68
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics;
1.95A {Mycobacterium smegmatis}
Length = 266
Score = 30.2 bits (69), Expect = 0.025
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 1 MDRWIGRIVLVTGACSS-LGETLCKELALSGLTVVGLARRRHRVRRSTA 48
G++VLVT A + +G T + L G VV R+ +
Sbjct: 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRD 65
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin
salvage, drug resistance; HET: NAP FE1; 2.61A
{Leishmania major} SCOP: c.2.1.2
Length = 328
Score = 29.7 bits (67), Expect = 0.030
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M + LVTGA LG ++ + L G V
Sbjct: 41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVC 74
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 29.8 bits (68), Expect = 0.031
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G+ ++TGA + +G+ + A +G +VV
Sbjct: 11 GKCAIITGAGAGIGKEIAITFATAGASVV 39
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 29.8 bits (68), Expect = 0.031
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LV+G +G + + + G VV
Sbjct: 7 GKVALVSGGARGMGASHVRAMVAEGAKVV 35
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 29.6 bits (67), Expect = 0.034
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
M + LVTGA LG ++ + L G V
Sbjct: 4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVC 37
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short
chain dehydrogenase reductase, flavonoi oxidoreductase;
HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A*
3i6q_A*
Length = 346
Score = 29.6 bits (66), Expect = 0.034
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPK 51
VL+ GA +G+ + + LAR R + K
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK 55
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 29.5 bits (67), Expect = 0.035
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
++TG +G ++ L G VV
Sbjct: 11 CPAAVITGGARRIGHSIAVRLHQQGFRVV 39
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 29.4 bits (67), Expect = 0.036
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
+R ++ ++TG +GET K G VV
Sbjct: 11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVV 44
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold,
protein-NAD complex, sugar binding protein; HET: NAD;
2.19A {Bordetella bronchiseptica}
Length = 333
Score = 29.5 bits (67), Expect = 0.037
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL----ARRRHRVRRSTAVPKVEFYH 56
V +TG C +G + + L G VVG+ RR ++ P + F
Sbjct: 24 VFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK---DHPNLTFVE 72
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 242
Score = 29.5 bits (67), Expect = 0.041
Identities = 12/28 (42%), Positives = 12/28 (42%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
R LVTG S LG L G VV
Sbjct: 3 RSALVTGGASGLGRAAALALKARGYRVV 30
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural
genomics, secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 29.4 bits (67), Expect = 0.043
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
R L+TGA +G + LA G +
Sbjct: 2 RKALITGASRGIGRAIALRLAEDGFALA 29
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase;
1.60A {Medicago sativa}
Length = 307
Score = 29.5 bits (66), Expect = 0.043
Identities = 6/31 (19%), Positives = 13/31 (41%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARR 39
+L+ G ++G + +G L R+
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRK 35
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold,
rossmann fold, oxidoreductase; HET: NAP; 2.30A
{Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 29.4 bits (67), Expect = 0.044
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVV 34
+V+VTGA +G+ + L +G V+
Sbjct: 2 PVVVVTGASRGIGKAIALSLGKAGCKVL 29
>4e4y_A Short chain dehydrogenase family protein; structural genomics,
the center for structural genomics of I diseases,
csgid, niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 29.4 bits (67), Expect = 0.046
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
LVTG +G+ + + L + V
Sbjct: 4 MANYLVTGGSKGIGKAVVELLLQNKNHTV 32
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 29.1 bits (66), Expect = 0.046
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRRHRV 43
++ +TG+ S +G L + LA +G TV+G+ R + +
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADI 38
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 29.0 bits (66), Expect = 0.049
Identities = 11/33 (33%), Positives = 12/33 (36%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
I LVT A G + L G TVV
Sbjct: 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDAS 34
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 29.1 bits (66), Expect = 0.050
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++V+VTG +G + + SG VV
Sbjct: 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVV 37
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur
genomics, joint center for structural genomics, JCSG,
prote structure initiative; HET: MSE NDP; 1.70A
{Ralstonia eutropha}
Length = 379
Score = 29.1 bits (65), Expect = 0.054
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTA 48
++ T A S+LG+ L + G+ +V + R++ + A
Sbjct: 172 HSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA 214
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics,
PSI-2, protein structure initiative; 1.40A {Lactococcus
lactis subsp}
Length = 219
Score = 29.2 bits (66), Expect = 0.056
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAV 49
+ + G+ +G++L K L+ + + AR+ +V + V
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNV 43
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain
dehydrogenase/reductase, plant protein; HET: NDP; 1.50A
{Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A*
3c3x_A* 2qw8_A*
Length = 318
Score = 29.1 bits (65), Expect = 0.058
Identities = 6/31 (19%), Positives = 10/31 (32%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARR 39
+L+ G +G + K G R
Sbjct: 14 ILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP 44
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD;
1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 29.0 bits (66), Expect = 0.059
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 5 IGRIVLVTGACSSLGETLCKELALSGLTVV 34
+ ++ LVTGA +G+ + L G V
Sbjct: 1 MKKVALVTGAGQGIGKAIALRLVKDGFAVA 30
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 29.2 bits (65), Expect = 0.060
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 17 SLGE-T-LCKELALSGL----TVVGLARRRHRVRRSTAVPKVE 53
SLGE L +L+ + ++V + R + AVP+ E
Sbjct: 1763 SLGEYAALA---SLADVMSIESLVEVVFYRGMTMQ-VAVPRDE 1801
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 29.0 bits (66), Expect = 0.061
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ L+TGA S GE + K A G VV
Sbjct: 9 GKVALITGAGSGFGEGMAKRFAKGGAKVV 37
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent
aromatic alcohol reductases, pcber, PLR, IFR, lignans,
isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP:
c.2.1.2
Length = 308
Score = 29.1 bits (65), Expect = 0.063
Identities = 10/45 (22%), Positives = 15/45 (33%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVE 53
+L+ GA +G + K G L R S +E
Sbjct: 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLE 51
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic
alcohol reductases, pcber, PLR, IFR, lignans,
isoflavonoids, plant protein; 2.50A {Thuja plicata}
SCOP: c.2.1.2
Length = 313
Score = 28.7 bits (64), Expect = 0.067
Identities = 9/50 (18%), Positives = 14/50 (28%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVEFYHRG 58
VL+ G +G+ + G L R + F G
Sbjct: 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLG 56
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics;
2.50A {Mycobacterium thermoresistibile}
Length = 285
Score = 28.8 bits (65), Expect = 0.069
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G+ + ++G +G + K +A G V +A+
Sbjct: 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKS 42
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 28.6 bits (65), Expect = 0.073
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ ++TG +G + + G V+
Sbjct: 6 GKVAIITGGTLGIGLAIATKFVEEGAKVM 34
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A
{Bacillus anthracis str}
Length = 255
Score = 28.7 bits (65), Expect = 0.078
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA +G + K LA G V
Sbjct: 7 GKVALVTGASRGIGRAIAKRLANDGALVA 35
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural
genomics, protein structure initiati
nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Length = 272
Score = 28.7 bits (65), Expect = 0.079
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
+VLVTG +G +C+ A G V
Sbjct: 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVG 54
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 28.7 bits (65), Expect = 0.081
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
++ +VTGA +G + LA G TVV
Sbjct: 27 NKVAIVTGASRGIGAAIAARLASDGFTVV 55
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ;
1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 28.7 bits (65), Expect = 0.083
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ L TGA +G + EL G +VV
Sbjct: 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVV 49
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD
UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A*
3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Length = 351
Score = 28.4 bits (64), Expect = 0.086
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGL 36
+ L+TG +G L ++L V+GL
Sbjct: 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGL 55
>4dqx_A Probable oxidoreductase protein; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.00A {Rhizobium etli}
Length = 277
Score = 28.7 bits (65), Expect = 0.086
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
R+ +VTG S +G + A +G VV
Sbjct: 27 QRVCIVTGGGSGIGRATAELFAKNGAYVV 55
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 28.3 bits (64), Expect = 0.10
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARR 39
G+ + +TGA +G + A G V A+
Sbjct: 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKS 39
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 28.2 bits (64), Expect = 0.11
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTG S +G + K L G V
Sbjct: 6 GKVALVTGGASGVGLEVVKLLLGEGAKVA 34
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK,
UDP, N-acetylglucosamine, N- acetylgalactosamine,
UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas
aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Length = 352
Score = 28.0 bits (63), Expect = 0.12
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGL 36
++ L+TG +G L + L VVGL
Sbjct: 28 KVWLITGVAGFIGSNLLETLLKLDQKVVGL 57
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain
dehydrogenase/REDU SDR, fungi, oxidoreductase; HET:
GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A*
3qwi_A* 3itd_A
Length = 270
Score = 27.9 bits (63), Expect = 0.13
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVV 34
R G++ LVTG+ +G + L G VV
Sbjct: 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVV 46
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold,
dinucleotide binding oxidoreductase; HET: NAP; 1.75A
{Drosophila melanogaster} SCOP: c.2.1.2
Length = 267
Score = 28.1 bits (63), Expect = 0.13
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 3/39 (7%)
Query: 7 RIVLVTGACSSLGETLCKELAL---SGLTVVGLARRRHR 42
+L+TG LG L K L + R R +
Sbjct: 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ 60
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 27.9 bits (63), Expect = 0.13
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G+ VTG +G + K LAL G V
Sbjct: 31 GKTAFVTGGSRGIGAAIAKRLALEGAAVA 59
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 28.1 bits (63), Expect = 0.14
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Query: 7 RIVLVTGACSSLGETLCKELA---LSGLTVVGLARRRHRVRR 45
+VL+TG S +G L LA V R R
Sbjct: 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGR 44
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe
grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 28.0 bits (63), Expect = 0.15
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
G++ LVTGA +G + EL G V+
Sbjct: 29 GKVALVTGAGRGIGREMAMELGRRGCKVI 57
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 27.5 bits (62), Expect = 0.18
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 6 GRIVLVTGACSS--LGETLCKELALSGLTVVGLARRR 40
G++V+VTGA +G + A G V R
Sbjct: 20 GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASR 56
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 27.6 bits (62), Expect = 0.19
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
+L+ GA +LG + + L V+ R V
Sbjct: 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVT 40
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C,
northeast structural genomics consortium, NESG, C
PSI-biology; 2.00A {Corynebacterium glutamicum}
Length = 516
Score = 27.3 bits (61), Expect = 0.22
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
V +TG+ +G L +L G V+ L R+ + +
Sbjct: 150 VAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK 186
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid
decarboxylase, structural genomics, STRU genomics
consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo
sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Length = 343
Score = 27.4 bits (61), Expect = 0.23
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL 36
+L+TG +G L +L + G V +
Sbjct: 30 ILITGGAGFVGSHLTDKLMMDGHEVTVV 57
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold,
transcriptional regulation, short chain dehyd
reductase, NADP binding; 1.40A {Emericella nidulans}
SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A*
2vus_A 2vut_A* 2vuu_A*
Length = 352
Score = 27.1 bits (60), Expect = 0.25
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 2/49 (4%)
Query: 7 RIVLVTGACSSLGETLCKELALSGLTVVGLAR--RRHRVRRSTAVPKVE 53
+ + V GA G +L + A G V + A+P V
Sbjct: 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVT 54
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM
degradation, flavin reductase, diaphorase, green HAEM
binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP:
c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Length = 206
Score = 27.3 bits (61), Expect = 0.27
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVR 44
+ + GA G T + +G V L R R+
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP 41
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain
dehydrogenase/reductase, oxidoreductase; HET: NAP;
1.80A {Clarkia breweri}
Length = 321
Score = 27.2 bits (60), Expect = 0.27
Identities = 4/30 (13%), Positives = 11/30 (36%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLAR 38
+++ G +G+ + + AR
Sbjct: 7 IIIYGGTGYIGKFMVRASLSFSHPTFIYAR 36
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein
structure initiati midwest center for structural
genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Length = 382
Score = 27.3 bits (61), Expect = 0.27
Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Query: 14 ACSSLG----ETLCKELALSGLTVV-GLAR 38
S G L +L +G V+ GLAR
Sbjct: 137 NASGAGLKFAGQLAADLGAAGFVVISGLAR 166
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid
dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter
salexigens}
Length = 267
Score = 26.9 bits (60), Expect = 0.30
Identities = 8/28 (28%), Positives = 11/28 (39%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL 36
+LVTGA +G + L V
Sbjct: 5 LLVTGAAGGVGSAIRPHLGTLAHEVRLS 32
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 26.7 bits (59), Expect = 0.42
Identities = 8/37 (21%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 9 VLVTGACSSLGETLCKELAL-SGLTVVGLARRRHRVR 44
VL+ GA + + +LA + AR+ ++
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH 62
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 26.4 bits (59), Expect = 0.49
Identities = 8/36 (22%), Positives = 15/36 (41%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
+ GR+ +TGA G +A G ++ +
Sbjct: 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV 41
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase,
GDP-gulose, GDP-galactose, keto intermediate, vitamin
C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana}
SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Length = 379
Score = 26.5 bits (59), Expect = 0.52
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL 36
+ +TGA + + + L G V+
Sbjct: 32 ISITGAGGFIASHIARRLKHEGHYVIAS 59
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 26.4 bits (59), Expect = 0.53
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
R G++ VTGA G + LA G ++ +
Sbjct: 6 TGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAV 41
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins,
biosynthesis, EXO-glycal, rossman transferase; HET: UD1
NAD; 1.90A {Streptomyces chartreusis}
Length = 321
Score = 26.4 bits (59), Expect = 0.59
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL 36
+L+TG +G L + L SG V L
Sbjct: 10 ILITGGAGFIGGHLARALVASGEEVTVL 37
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A
{Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB:
1wvg_A*
Length = 357
Score = 26.0 bits (57), Expect = 0.65
Identities = 13/40 (32%), Positives = 15/40 (37%), Gaps = 12/40 (30%)
Query: 4 WIGRIVLVTGACSSLGET------LCKELALSGLTVVGLA 37
W G+ V VTG T L L G TV G +
Sbjct: 7 WQGKRVFVTGH------TGFKGGWLSLWLQTMGATVKGYS 40
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 26.0 bits (58), Expect = 0.75
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
+ G++ +TGA G + LA G ++ +
Sbjct: 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAI 58
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION
transporter, symporter, transport protein; HET: NAI;
2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A*
2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Length = 144
Score = 25.7 bits (57), Expect = 0.86
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
M R + V G G ++ KEL G V+ + +V
Sbjct: 1 MGRIKNKQFAVIG-LGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 25.7 bits (57), Expect = 0.86
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
M R ++VLVTG G + +LA G ++
Sbjct: 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILF 40
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 25.7 bits (57), Expect = 0.86
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
M+R G++ +TGA G T LA G +V +
Sbjct: 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAI 76
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 25.6 bits (57), Expect = 0.87
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
G++ +TGA G LA G ++ +
Sbjct: 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV 43
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus
flagellatus}
Length = 319
Score = 25.6 bits (57), Expect = 0.91
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 25 ELALSGLTVVGLARRRHRVRRSTAVP 50
L +S + ++G + RSTA
Sbjct: 124 PLTIS-VQIMGETPPGASLLRSTARA 148
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 25.6 bits (57), Expect = 0.96
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
GR+ +TGA G + LA G ++
Sbjct: 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIAC 45
>1xq6_A Unknown protein; structural genomics, protein structure
initiative, CESG, AT5G02240, NADP, center for
eukaryotic structural genomics; HET: NAP; 1.80A
{Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A*
2q46_A* 2q4b_A*
Length = 253
Score = 25.6 bits (56), Expect = 0.97
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 9 VLVTGACSSLGETLCKELALSG--LTVVGLARRRHRVR 44
VLVTGA G+ + K+L GL R
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE 44
>3s55_A Putative short-chain dehydrogenase/reductase; structural
genomics, seattle structural genomics center for
infectious disease, ssgcid; HET: NAD; 2.10A
{Mycobacterium abscessus}
Length = 281
Score = 25.6 bits (57), Expect = 1.0
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 1 MDRWIGRIVLVTGACSSLGETLCKELALSGLTVVGL 36
M + G+ L+TG +G + LA +G +
Sbjct: 5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAIC 40
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 25.6 bits (56), Expect = 1.1
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRR 40
++TG G L + L L G + L R
Sbjct: 1887 YVITGGLGGFGLQLAQWLRLRGAQKLVLTSRS 1918
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics,
PSI-biology, midwest center for structu genomics, MCSG,
veillo parvula; HET: MLZ; 1.25A {Veillonella parvula
dsm 2008} PDB: 3r14_A*
Length = 221
Score = 25.4 bits (55), Expect = 1.1
Identities = 5/35 (14%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 9 VLVTGACSSLGETLCKEL-ALSGLTVVGLARRRHR 42
+ + GA + + L L + + + R+
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKT 42
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK
triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1
MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A*
2gn9_A* 2gna_A*
Length = 344
Score = 25.3 bits (56), Expect = 1.1
Identities = 5/21 (23%), Positives = 12/21 (57%)
Query: 6 GRIVLVTGACSSLGETLCKEL 26
+ +L+TG S G+ +++
Sbjct: 21 NQTILITGGTGSFGKCFVRKV 41
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold,
structural GE joint center for structural genomics,
JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Length = 349
Score = 24.9 bits (55), Expect = 1.5
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
+ ++T S L + + G + RR
Sbjct: 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD 199
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain
dehydrogenase reductase, oxidoreductase; HET: NMN AMP;
1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB:
1ujm_A* 1zze_A
Length = 342
Score = 24.9 bits (55), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38
G +VLVTGA + + ++L G V G AR
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTAR 43
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative
quinone oxidoreductase, unknown function, PSI-2; 1.76A
{Bacillus thuringiensis}
Length = 340
Score = 24.5 bits (54), Expect = 2.6
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
++LV S++G + + ++ + R
Sbjct: 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN 179
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 24.4 bits (54), Expect = 2.8
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVV 34
R LVTG S +G A G V
Sbjct: 49 DRKALVTGGDSGIGRAAAIAYAREGADVA 77
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N
biosynthes methyltransferase, transferase; 2.3A
{Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A
1z75_A 1z7b_A 1z74_A
Length = 345
Score = 24.3 bits (53), Expect = 2.9
Identities = 12/49 (24%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Query: 9 VLVTGACSSLGETLCKELALSG-LTVVGLARRRHRVRRSTAVPKVEFYH 56
VL+ G +G L + L V GL + R P F
Sbjct: 3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVE 51
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis,
malonyl/palmitoyl transferase, phosphopantetheine,
transferase; HET: GVL FMN; 3.10A {Saccharomyces
cerevisiae} PDB: 2vkz_A* 3hmj_A*
Length = 1887
Score = 24.2 bits (52), Expect = 3.7
Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 3 RWIGRIVLVTGAC-SSLGETLCKELALSGLTVV 34
+ + VL+TGA S+G + + L G VV
Sbjct: 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVV 704
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann,
PSI, M structural genomics; 1.70A {Archaeoglobus
fulgidus}
Length = 141
Score = 23.8 bits (52), Expect = 3.9
Identities = 8/37 (21%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRR 45
+V G + G L +EL +G V+ + + + ++
Sbjct: 9 YIVIG-SEAAGVGLVRELTAAGKKVLAVDKSKEKIEL 44
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP:
b.35.1.2 c.2.1.1
Length = 327
Score = 23.7 bits (52), Expect = 3.9
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
L A +G C+ G ++G
Sbjct: 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTV 172
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase
reductase, NADPH, dihydroquercetin, rossmann fold,
oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera}
PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Length = 337
Score = 23.7 bits (52), Expect = 4.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38
V VTGA +G L L G TV R
Sbjct: 5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVR 37
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding,
oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB:
3rfv_A* 3rfx_A*
Length = 267
Score = 23.9 bits (52), Expect = 4.5
Identities = 12/48 (25%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRRHRVRRSTAVPKVEFYH 56
+LVTGA LG + + LA + A P E
Sbjct: 6 LLVTGAAGQLGRVMRERLAPMAEILRLA----DLSPLDPAGPNEECVQ 49
>2pw9_A Putative formate dehydrogenase accessory protein; structural
genomics, unknown function, PSI-2, protein structure
initiative; 2.10A {Desulfotalea psychrophila LSV54}
SCOP: c.97.1.5
Length = 268
Score = 23.7 bits (52), Expect = 4.8
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Query: 9 VLVT-GACSSLGETLCKELALSGLTVVGLARRRH 41
++++ + SSLG L K G T+V +R
Sbjct: 218 IIMSRTSPSSLGLALAKRS---GATLVAYSRPER 248
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics
center for infectious disease, ssgcid, melioidosis,
glanders; 2.10A {Burkholderia pseudomallei}
Length = 372
Score = 23.6 bits (51), Expect = 6.2
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGL 36
VL+ G +G L K + + V
Sbjct: 27 VLILGVNGFIGHHLSKRILETTDWEVFG 54
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET:
NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Length = 325
Score = 23.3 bits (51), Expect = 6.9
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLA 37
G I+L A +G C+ G ++G
Sbjct: 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTV 172
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif,
rossmann fold, short chain dehydrogenase/REDU family,
reductase; 2.30A {Mycobacterium tuberculosis}
Length = 478
Score = 23.3 bits (50), Expect = 7.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 6 GRIVLVTGACSSLGETLCKEL 26
R VL+TGA LG L EL
Sbjct: 73 LRTVLLTGATGFLGRYLVLEL 93
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain
dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis
vinifera} PDB: 3hfs_A
Length = 338
Score = 23.0 bits (50), Expect = 7.2
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 6 GRIVLVTGACSSLGETLCKELALSGLTVVGLAR 38
+ V G + L K L G V R
Sbjct: 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR 41
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 23.2 bits (50), Expect = 7.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 8 IVLVTGACSSLGETLCKELALSGLTVVGLARRR 40
VL+TG ++G L + LA G + L RR
Sbjct: 261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRR 293
>3roj_A D-fructose 1,6-bisphosphatase class 2/sedoheptulo bisphosphatase;
fructose-1,6-/sedoheptulose-1,7-bisphosphatase,
hydrolase; HET: AMP GOL; 2.30A {Synechocystis} PDB:
3rpl_A*
Length = 379
Score = 23.1 bits (50), Expect = 7.8
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 23 CKELALSGLTVVGLARRRHR 42
C ++ L VV + R RH+
Sbjct: 195 CLNRSIEELVVVVMDRPRHK 214
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 23.1 bits (50), Expect = 8.0
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLARRR 40
VLVTG +G + + LA G + L R
Sbjct: 229 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRS 260
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid,
plant protein; 1.40A {Medicago sativa}
Length = 322
Score = 23.0 bits (50), Expect = 9.0
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 9 VLVTGACSSLGETLCKELALSGLTVVGLAR 38
V VTG LG + K L +G +V R
Sbjct: 4 VCVTGGTGFLGSWIIKSLLENGYSVNTTIR 33
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.328 0.139 0.425
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,009,048
Number of extensions: 46410
Number of successful extensions: 399
Number of sequences better than 10.0: 1
Number of HSP's gapped: 396
Number of HSP's successfully gapped: 251
Length of query: 62
Length of database: 6,701,793
Length adjustment: 33
Effective length of query: 29
Effective length of database: 5,780,400
Effective search space: 167631600
Effective search space used: 167631600
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (23.2 bits)