RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy666
         (102 letters)



>d1v9la2 c.58.1.1 (A:4-179) Glutamate dehydrogenase {Pyrobaculum
           islandicum [TaxId: 2277]}
          Length = 176

 Score = 23.3 bits (50), Expect = 6.0
 Identities = 9/42 (21%), Positives = 17/42 (40%)

Query: 23  LSTTESQALRYDVIRFIVGVIHPTNELLCSDIIPRWAVIGWL 64
           LS  E + L     R I  +I    ++   D+     ++ W+
Sbjct: 112 LSQRELEELSRGYARAIAPLIGDVVDIPAPDVGTNAQIMAWM 153


>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia
          coli [TaxId: 562]}
          Length = 84

 Score = 22.6 bits (48), Expect = 6.8
 Identities = 9/53 (16%), Positives = 18/53 (33%)

Query: 10 SVLQELQVLPVWYLSTTESQALRYDVIRFIVGVIHPTNELLCSDIIPRWAVIG 62
           V Q L+ +P     + +  A      + +  V         + +IP   V+ 
Sbjct: 7  QVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVR 59


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.139    0.477 

Gapped
Lambda     K      H
   0.267   0.0589    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 427,488
Number of extensions: 17506
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 3
Length of query: 102
Length of database: 2,407,596
Length adjustment: 63
Effective length of query: 39
Effective length of database: 1,542,606
Effective search space: 60161634
Effective search space used: 60161634
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 47 (22.2 bits)