RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6661
(172 letters)
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 109 bits (273), Expect = 1e-31
Identities = 84/167 (50%), Positives = 120/167 (71%), Gaps = 1/167 (0%)
Query: 6 TKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDK 65
PNIL+TGTPG GK+TL +E+ + L++I+V +ARE Q Y YDE+Y+CP LDED+
Sbjct: 3 LLPNILLTGTPGVGKTTLGKELASKSG-LKYINVGDLAREEQLYDGYDEEYDCPILDEDR 61
Query: 66 LLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDNL 125
++DEL+ +++ GG I+DYH + FPERW V+VL D LY+RL +G + KKL DN+
Sbjct: 62 VVDELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNEKKLTDNI 121
Query: 126 QCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQFVKQWK 172
QCEIFQ + EEA SYKE+IV LPSN +++ +NV I+++++QW
Sbjct: 122 QCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVDQILKWIEQWI 168
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 102 bits (254), Expect = 1e-28
Identities = 68/168 (40%), Positives = 106/168 (63%), Gaps = 4/168 (2%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYE---CPELDEDK 65
NILITGTPGTGK+++ E + + D + ++V K+ +EN FY +YD + + E DED+
Sbjct: 7 NILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDR 66
Query: 66 LLDELEPRVQ-GGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDN 124
LLD +EP + G ++DYHS+E+FPERW V VL L++RL ++ S K +N
Sbjct: 67 LLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTSTEVLFERLTKRQYSEAKRAEN 126
Query: 125 LQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQFVKQWK 172
++ EI EEARD+Y++DIV+ ++T + M++ V I + V+ K
Sbjct: 127 MEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVEEIRERVEVLK 174
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 46.3 bits (108), Expect = 2e-07
Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 10/169 (5%)
Query: 7 KPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKL 66
K NI + G G GKST+ ++ +Q + +E+ D ++ + E
Sbjct: 2 KRNIFLVGPMGAGKSTIGRQLAQQLN-MEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDR 60
Query: 67 -------LDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGK 119
L E + V G V L R +
Sbjct: 61 EEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPL 120
Query: 120 KLQDNLQCEIFQTILEEARDSYKE--DIVVSLPSNTHDDMSSNVTSIIQ 166
+ E+ + + E Y+E D+ + + +++ + +++
Sbjct: 121 LHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLE 169
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 45.4 bits (106), Expect = 4e-07
Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 18/172 (10%)
Query: 7 KPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE-NQFYLKYDEQYECPELDEDK 65
K +ITG G GKST C+ + Q D+ +I+ + I Y E E L
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKN 61
Query: 66 LLDELEPRV-QGGGKIIDYHSAEMFPERWIDQ-----------VYVLSADNTTLYDRLVE 113
+ D + ++DY + E +L + L R
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRRDAL 121
Query: 114 KGQSGKKLQDNLQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSII 165
+ + + + L E+ + + D E + +++ V ++
Sbjct: 122 RKKDEQMGERCL--ELVEEFESKGID---ERYFYNTSHLQPTNLNDIVKNLK 168
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 42.6 bits (99), Expect = 3e-06
Identities = 22/173 (12%), Positives = 51/173 (29%), Gaps = 15/173 (8%)
Query: 7 KPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQF--------YLKYDEQYEC 58
I + G G G +T+ E+ + E++D + + +
Sbjct: 2 TEPIFMVGARGCGMTTVGRELARALG-YEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRR 60
Query: 59 PELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSG 118
+ GGG ++ + + A+ L + +
Sbjct: 61 ESEALQAVATPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELALRLQASLQAHQR 120
Query: 119 KKLQDNLQCEIFQTILEEARDSYKE--DIVVSLPSNTHDDMSSNVTSIIQFVK 169
L E + +L E Y++ VV + ++ V ++Q ++
Sbjct: 121 PTLTGRPIAEEMEAVLREREALYQDVAHYVV----DATQPPAAIVCELMQTMR 169
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 42.2 bits (98), Expect = 4e-06
Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 8/163 (4%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLD 68
NI+ G G+GKSTL + K D L ++D + + + + + E +
Sbjct: 2 NIVFIGFMGSGKSTLARALAKDLD-LVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQ 60
Query: 69 ELEPRVQGGGKIIDYHSAEMFPERWIDQ---VYVLSADNTTLYDRLVEKGQSGKKLQDNL 125
++ K +++ L AD L RL + S + L +
Sbjct: 61 KMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDEISKRPLFYDE 120
Query: 126 QCEIFQTILEEARDSYKE--DIVVSLPSNTHDDMSSNVTSIIQ 166
+ + E Y++ + ++++ + D++ S + +I+
Sbjct: 121 I--KAKKLYNERLSKYEQKANFILNIENKNIDELLSEIKKVIK 161
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 39.6 bits (91), Expect = 5e-05
Identities = 21/166 (12%), Positives = 48/166 (28%), Gaps = 10/166 (6%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLL 67
P ++ G PG+GKST+ + K + +D + + D E + ++
Sbjct: 2 PKAVLVGLPGSGKSTIGRRLAKALG-VGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIE 60
Query: 68 D------ELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKL 121
+ + S + V L R L
Sbjct: 61 EDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVR-PLL 119
Query: 122 QDNLQCEIFQTILEEARDSYKE--DIVVSLPSNTHDDMSSNVTSII 165
+ E ++ ++ + Y+ + V + ++ S +
Sbjct: 120 AGPDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRL 165
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 39.2 bits (90), Expect = 7e-05
Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 16/170 (9%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDE------ 63
++ G G+GKS + EV Q + R N + E +
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALN 68
Query: 64 ---DKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKK 120
+ + + + ++ + L D + RL K + G
Sbjct: 69 DAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRL--KARKGHF 126
Query: 121 LQDNLQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQFVKQ 170
+ + F+T L+E + +VV + + + V S I+ +K+
Sbjct: 127 FKTQMLVTQFET-LQEPGADETDVLVVDI-DQPLEGV---VASTIEVIKK 171
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 39.3 bits (90), Expect = 7e-05
Identities = 18/171 (10%), Positives = 48/171 (28%), Gaps = 13/171 (7%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECP------ELDE 63
+ +TG G GK+T+ + + + L + +
Sbjct: 22 VWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVRRIA 81
Query: 64 DKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQD 123
+ + + I ++ + R I + L + L Q K
Sbjct: 82 EVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGLY 141
Query: 124 NLQCEIFQTILEEARDSYKE----DIVVSLPSNTHDDMSSNVTSIIQFVKQ 170
Y++ ++V+ D++ V +++ +++
Sbjct: 142 KKARAGEIKGFTGIDSEYEKPEAPELVL---KTDSCDVNDCVQQVVELLQE 189
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 38.7 bits (89), Expect = 9e-05
Identities = 27/179 (15%), Positives = 59/179 (32%), Gaps = 23/179 (12%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKY----------DEQYEC 58
+L+ G PG GK T ++ ++ + I ++ R N
Sbjct: 2 RVLLLGPPGAGKGTQAVKLAEKLG-IPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 59 PELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERW-----------IDQVYVLSADNTTL 107
+L + + D L G I+D + + + ID V L
Sbjct: 61 SDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVL 120
Query: 108 YDRLVEKGQSGKKLQDNLQC-EIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSII 165
+RL +G++ L ++++ + Y++ + T D++ + +
Sbjct: 121 LERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRAL 179
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 38.0 bits (87), Expect = 1e-04
Identities = 15/171 (8%), Positives = 55/171 (32%), Gaps = 14/171 (8%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQCDSLEW-IDVNKIARENQFYLKYD-------EQYECP 59
P + GTGK+TL ++++ + + K + K +
Sbjct: 3 PLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQ 62
Query: 60 ELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGK 119
+ + L ++ A +D + V + + ++ + +G
Sbjct: 63 TIVASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGH 122
Query: 120 KLQDNLQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQFVKQ 170
+ ++ + + + + + + +D+ +++++++
Sbjct: 123 RPEELVIDRHVIAV------ASDVPLNLDVALLDINDVEGLADFVVEWMQK 167
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 36.5 bits (83), Expect = 7e-04
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 26/189 (13%)
Query: 4 KRTKPN-ILITGTPGTGKSTLCEEVVKQ--------CDSLEWIDVNKIARENQFYLKYDE 54
+++KPN + + G PG+GK T C +V+ D L +
Sbjct: 2 EKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKN 61
Query: 55 QYECPELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQ----------VYVLSADN 104
P + KLL QG ++D ++ V
Sbjct: 62 GEIVPSIVTVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPE 121
Query: 105 TTLYDRLVEKGQSGKKLQDNLQ-----CEIFQTILEEARDSYKE-DIVVSLPSN-THDDM 157
+ RL+++G+S + DN++ F + D Y + D V +P+N +++
Sbjct: 122 EVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEV 181
Query: 158 SSNVTSIIQ 166
++V ++ +
Sbjct: 182 YNDVENLFK 190
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 35.8 bits (81), Expect = 0.001
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 9 NILITGTPGTGKSTLCEEVVKQ 30
++ +TG PG GK+TL + +
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEV 24
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 34.9 bits (79), Expect = 0.002
Identities = 23/168 (13%), Positives = 47/168 (27%), Gaps = 16/168 (9%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVN-----------KIARENQFYLKYDEQYEC 58
+L++G PG+GKST+ E + + + + +I + +
Sbjct: 7 LLLSGHPGSGKSTIAEALANLPG-VPKVHFHSDDLWGYIKHGRIDPWLPQSHQQNRMIMQ 65
Query: 59 PELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSG 118
D + V G + VL +R +++G
Sbjct: 66 IAADVAGRYAKEGYFVILDGVVRPDWLPAFTALARPLHYIVLRTTAAEAIERCLDRGGDS 125
Query: 119 KKLQDNLQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQ 166
+ Q A E V+ + D + + +Q
Sbjct: 126 LSDPLVVADLHSQFADLGAF----EHHVLPVSGKDTDQALQSAINALQ 169
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 34.7 bits (78), Expect = 0.002
Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE---NQFYLKYDEQYECPELDEDKL 66
IL G PG+GKST E + + I+ + + ++ +Y + +
Sbjct: 5 ILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTGMQ 64
Query: 67 LDELEPRVQGGGKIIDYHSAEMFPERWIDQVYV 99
D + + GG + ++ +
Sbjct: 65 FDTAKSILYGGDSVKGVIISDTNLNPERRLAWE 97
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 34.7 bits (78), Expect = 0.002
Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 29/179 (16%)
Query: 9 NILITGTPGTGKSTLCEEVVKQ---------------------CDSLEWIDVNKIARENQ 47
+ I G +GKS L ++ ++++ D ++A +Q
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQ 68
Query: 48 FYLKYDEQYECPELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTL 107
Y+ Y ++ D + M E D +L + +
Sbjct: 69 RYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWV 128
Query: 108 YDRLVEKGQSGKKLQDNLQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQ 166
D L Q + FQ +L++ D YK + + S ++ D + V ++I+
Sbjct: 129 DDGLRSL-------GSQKQRQQFQQLLKKLLDKYKVPYIE-IESPSYLDRYNQVKAVIE 179
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 34.6 bits (78), Expect = 0.003
Identities = 16/117 (13%), Positives = 34/117 (29%), Gaps = 5/117 (4%)
Query: 1 MSSKRTKPNILITGTPGTGKSTLCEEVVKQCDSL-EWIDVNKIARENQFYLKYDEQYECP 59
M+++ I++ G GKS + + V+ + ++ E
Sbjct: 1 MTTR----MIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEF 56
Query: 60 ELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQ 116
+ D + ++G A ID V++ A + V
Sbjct: 57 DADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLD 113
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 34.6 bits (78), Expect = 0.004
Identities = 22/156 (14%), Positives = 49/156 (31%), Gaps = 12/156 (7%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
++ GT G+GK+TL E + + K+A N + YE P +D + +
Sbjct: 3 VVFVGTAGSGKTTLTGEFGRYLEDNY-----KVAYVNLDTGVKELPYE-PSIDVREFVTV 56
Query: 70 LEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDNLQCEI 129
E +G G + ++ D ++ ++ +
Sbjct: 57 EEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDT------PGQMETFL 110
Query: 130 FQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSII 165
F ++ +VV + ++ +
Sbjct: 111 FHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVR 146
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 33.8 bits (77), Expect = 0.005
Identities = 19/72 (26%), Positives = 28/72 (38%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
+LITG G GKS E++K+ L D +I ++ L L E + L
Sbjct: 18 VLITGDSGIGKSETALELIKRGHRLVADDNVEIREISKDELIGRAPKLIEHLLEIRGLGI 77
Query: 70 LEPRVQGGGKII 81
+ G I
Sbjct: 78 INVMTLFGAGSI 89
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 33.8 bits (76), Expect = 0.005
Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 27/187 (14%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSL--------EWIDVNKIARENQFYLKYDEQYECPEL 61
+++TG PG G +T + + + ++A+E D+ +
Sbjct: 4 VVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDPE 63
Query: 62 DEDKLLDELEPRV----QGGGKIIDYHSAEMFPERWIDQ-------------VYVLSADN 104
+ ++ ++ + +D HS P+ ++ + V+
Sbjct: 64 TQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYLPGLPSWVLNELNPDLIIVVETTG 123
Query: 105 TTLYDRLVEKGQSGKKLQDNLQCEIFQTILEEARDSYKE--DIVVSLPSNTHDDMSSNVT 162
+ R + + L E Q + A SY V + N + + V
Sbjct: 124 DEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLDQAVE 183
Query: 163 SIIQFVK 169
+ ++
Sbjct: 184 ELTNVLR 190
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 33.7 bits (76), Expect = 0.006
Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 9/139 (6%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLL 67
++I+G P +GK T CE + + L I + R + + +++ +L
Sbjct: 4 LKVMISGAPASGKGTQCELIKTKYQ-LAHISAGDLLRAEIAAGSENGKRAKEFMEKGQL- 61
Query: 68 DELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDNLQC 127
+++ + + ++L + + + + L
Sbjct: 62 -------VPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLD 114
Query: 128 EIFQTILEEARDSYKEDIV 146
+ ++E E+ V
Sbjct: 115 VPDELLVERVVFDDTEEKV 133
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 34.1 bits (77), Expect = 0.006
Identities = 11/36 (30%), Positives = 13/36 (36%)
Query: 1 MSSKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEW 36
M + +TGTPG GKST E
Sbjct: 48 MPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGL 83
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 33.8 bits (77), Expect = 0.007
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVK 29
+R K N L+ G G GK+ + E +
Sbjct: 35 CRRRKNNPLLVGESGVGKTAIAEGLAW 61
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 33.3 bits (75), Expect = 0.009
Identities = 22/173 (12%), Positives = 57/173 (32%), Gaps = 20/173 (11%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCD----------SLEWIDVNKIARENQFYLKYDEQYEC 58
I G PG+GK T+ + K + + +I + ++ +
Sbjct: 8 RAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPD 67
Query: 59 PELDEDKLLDELEPRVQG----GGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEK 114
+ L + G + + ID V L+ + RL ++
Sbjct: 68 DVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTDR 127
Query: 115 GQSGKKLQDNLQCEIFQTILEEARDSYKE-DIVVSLPSNTHDDMSSNVTSIIQ 166
++ K + + ++ E + Y++ ++ + + + +V + +Q
Sbjct: 128 PETVVK-----RLKAYEAQTEPVLEYYRKKGVLETFSGTETNKIWPHVYAFLQ 175
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 33.3 bits (75), Expect = 0.009
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEW 36
+ ITG PG GKST + + +
Sbjct: 54 VGITGVPGVGKSTTIDALGSLLTAAGH 80
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 33.5 bits (76), Expect = 0.010
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVKQ 30
+RTK N ++ G PG GK+ + E + ++
Sbjct: 39 LRRTKNNPVLIGEPGVGKTAIVEGLAQR 66
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 33.4 bits (75), Expect = 0.011
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 9 NILITGTPGTGKSTL 23
+L+ G GTGKST
Sbjct: 30 GVLVFGDRGTGKSTA 44
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 33.2 bits (74), Expect = 0.012
Identities = 18/143 (12%), Positives = 44/143 (30%), Gaps = 17/143 (11%)
Query: 4 KRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDE 63
P L+ G TGKS++ + + + YL + E +
Sbjct: 26 GLRAPITLVLGLRRTGKSSIIKIGINE------------LNLPYIYLDLRKFEERNYISY 73
Query: 64 DKLLDELEPRVQGGGK-----IIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSG 118
L EL+ + K + + + + + + + + L+E +
Sbjct: 74 KDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQA 133
Query: 119 KKLQDNLQCEIFQTILEEARDSY 141
K + + Q +++ +
Sbjct: 134 SKDNVIIVLDEAQELVKLRGVNL 156
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 32.6 bits (73), Expect = 0.012
Identities = 9/53 (16%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPE 60
+ + G PG GK T C +V++ + ++ R+ + +
Sbjct: 2 LVVFVLGGPGAGKGTQCARIVEKYG-YTHLSAGELLRDERKNPDSQYGELIEK 53
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 32.9 bits (73), Expect = 0.014
Identities = 15/113 (13%), Positives = 33/113 (29%), Gaps = 2/113 (1%)
Query: 2 SSKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPEL 61
+ P + G PGTGK+ ++ + I + E
Sbjct: 38 NPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYING-FIYRNFTAIIGEIARS 96
Query: 62 DEDKLLDELEPRVQGGGKIIDYHSAEMFPERW-IDQVYVLSADNTTLYDRLVE 113
R + ++++ +D + L+ D + + RL +
Sbjct: 97 LNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQ 149
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 32.6 bits (73), Expect = 0.014
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 14/87 (16%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLD 68
N+++ G PG GK T E++V + I + R L
Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYG-IPHISTGDMFRAAMKE-------------GTPLGL 47
Query: 69 ELEPRVQGGGKIIDYHSAEMFPERWID 95
+ + + G + D + + ER
Sbjct: 48 QAKQYMDRGDLVPDEVTIGIVRERLSK 74
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 32.5 bits (73), Expect = 0.014
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFY 49
I +TG +GKSTL E+ Q + ++ +N +
Sbjct: 27 IWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 32.4 bits (72), Expect = 0.017
Identities = 18/158 (11%), Positives = 43/158 (27%), Gaps = 5/158 (3%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC-----DSLEWIDVNKIARENQFYLKYDEQYECPELDED 64
G TGK+ L + + I EN F +
Sbjct: 40 TEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDH 99
Query: 65 KLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDN 124
+ + + + ++ ++ + L SG+
Sbjct: 100 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAE 159
Query: 125 LQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNVT 162
Q ++ Q + + S + ++ V + + D + +T
Sbjct: 160 RQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMT 197
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 32.4 bits (72), Expect = 0.019
Identities = 16/157 (10%), Positives = 41/157 (26%), Gaps = 5/157 (3%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
G G GK+TL + VK+ + + + Y L +
Sbjct: 49 YGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQTGYP 108
Query: 70 LEPRVQGGGKIID-----YHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDN 124
++ R I+ + + +D+ + + + L + +++
Sbjct: 109 IQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSR 168
Query: 125 LQCEIFQTILEEARDSYKEDIVVSLPSNTHDDMSSNV 161
+L + + +P
Sbjct: 169 DGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLH 205
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.7 bits (71), Expect = 0.020
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
+ G +GK+TL E+ V
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAA 24
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 32.2 bits (72), Expect = 0.021
Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 8/159 (5%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
IL TG GTGK+ L V+ + + + E++ L +D +++ +
Sbjct: 29 ILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLL--RNAYSWGMDFEEMERQ 86
Query: 70 LEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKKLQDNLQCEI 129
KI+ + E + + D + + + +N +
Sbjct: 87 ------NLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNNAFRQF 140
Query: 130 FQTILEEARDSYKEDIVVSLPSNTHDDMSSNVTSIIQFV 168
+ A+ + + S + I
Sbjct: 141 VIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISTIT 179
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 31.5 bits (70), Expect = 0.035
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 1 MSSKRTKPN-ILITGTPGTGKSTLCEEVVKQ 30
M K K I + G PG+GK T CE++V++
Sbjct: 1 MEEKLKKSKIIFVVGGPGSGKGTQCEKIVQK 31
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 31.5 bits (70), Expect = 0.037
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 4 KRTKPNILITGTPGTGKSTLCEEVVKQCD 32
K ++L+ G PG GK+TL + +
Sbjct: 32 KEPLEHLLLFGPPGLGKTTLAHVIAHELG 60
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 31.0 bits (69), Expect = 0.039
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFY 49
NI++ G PG GK T + +V++ I + R
Sbjct: 2 NIVLMGLPGAGKGTQADRIVEKYG-TPHISTGDMFRAAIQE 41
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 31.1 bits (69), Expect = 0.041
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDK 65
++ G PG GK T ++ K + + + R + +D K
Sbjct: 5 RAVLLGPPGAGKGTQAPKLAKNFC-VCHLATGDMLRAMVASGSELGKKLKATMDAGK 60
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 31.2 bits (69), Expect = 0.042
Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYL 50
P I I G G GK TLC+ + + +D I R
Sbjct: 4 PVITIDGPSGAGKGTLCKAMAEALQ-WHLLDSGAIYRVLALAA 45
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 31.3 bits (69), Expect = 0.046
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
+ G TGK+ +C + C
Sbjct: 26 TEMFGEFRTGKTQICHTLAVTC 47
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 31.4 bits (70), Expect = 0.047
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 9 NILITGTPGTGKSTLCEEVVKQC 31
++L+ G GTGKS L E+
Sbjct: 52 HLLVNGATGTGKSVLLRELAYTG 74
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 31.2 bits (69), Expect = 0.048
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEW 36
+ G TGKS LC + C
Sbjct: 37 TELFGEFRTGKSQLCHTLAVTCQIPLD 63
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 31.2 bits (69), Expect = 0.049
Identities = 10/38 (26%), Positives = 14/38 (36%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQ 47
I++T G GKST + Q + V E
Sbjct: 38 IMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEES 75
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 30.7 bits (68), Expect = 0.052
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 1 MSSKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFY 49
S I + G PG GK T CE++VK + + R Q
Sbjct: 2 AFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYS-FVHLSAGDLLRAEQGR 49
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 30.9 bits (68), Expect = 0.056
Identities = 8/57 (14%), Positives = 14/57 (24%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECP 59
+ R +LI PG G L + + + L +
Sbjct: 20 AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDY 76
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 30.5 bits (67), Expect = 0.073
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
+ I G +GK+TL ++ + L ++ ++ + +E
Sbjct: 25 LGIDGLSRSGKTTLANQLSQT---LREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYY 81
Query: 70 L 70
L
Sbjct: 82 L 82
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 30.4 bits (67), Expect = 0.083
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 7 KPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
I I G +GKST+ + + K ++D + R
Sbjct: 3 TIQIAIDGPASSGKSTVAKIIAKDFG-FTYLDTGAMYRA 40
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 30.2 bits (67), Expect = 0.083
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCD 32
++ G PG GKST +E +
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVSAG 39
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 29.9 bits (67), Expect = 0.089
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
+LITG G GKS E+V++
Sbjct: 17 VLITGDSGVGKSETALELVQRG 38
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.3 bits (67), Expect = 0.089
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 9 NILITGTPGTGKSTLCEEVVK 29
I++ G P GK T + +++
Sbjct: 2 RIILLGAPVAGKGTQAQFIME 22
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 30.5 bits (67), Expect = 0.091
Identities = 15/91 (16%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELD 62
R P++L+ G GTGK T C +++ + R+ F + + E +
Sbjct: 29 QPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQ--FVTASNRKLELNVVS 86
Query: 63 EDKLLDELEPRVQGGGKIIDYHSAEMFPERW 93
L+ + +I+ + +
Sbjct: 87 SPYHLEITPSDMGNNDRIVIQELLKEVAQME 117
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.1 bits (66), Expect = 0.100
Identities = 21/171 (12%), Positives = 39/171 (22%), Gaps = 13/171 (7%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSL------EWIDVNKIARENQFYLKYDEQYECPELDE 63
I +TG +GK + + + + + E
Sbjct: 9 IFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRHTNIQRI 68
Query: 64 DKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVEKGQSGKK-LQ 122
+ EL E S + L QS K+ +
Sbjct: 69 AFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQSDKRGIY 128
Query: 123 DNLQCEIFQTILEEARDSY---KEDIVVSLPSNTHDDMSSNVTSIIQFVKQ 170
+ + K D+VV + + V II ++
Sbjct: 129 AAARRGEIKGFTGVDDPYETPEKADLVVDFSKQSVRSI---VHEIILVLES 176
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 29.9 bits (67), Expect = 0.10
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
+L+TG G GKS +++ +
Sbjct: 18 VLLTGRSGIGKSECALDLINKN 39
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 29.6 bits (65), Expect = 0.12
Identities = 10/14 (71%), Positives = 12/14 (85%)
Query: 10 ILITGTPGTGKSTL 23
I+ITG PG GK+TL
Sbjct: 3 IIITGEPGVGKTTL 16
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 30.0 bits (66), Expect = 0.12
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
++TG PG GKST+ +V +
Sbjct: 4 GIVTGIPGVGKSTVLAKVKEI 24
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 29.5 bits (65), Expect = 0.13
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 9 NILITGTPGTGKSTLCEEVVKQ 30
+++ G PG GK T + ++
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQER 25
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 29.7 bits (65), Expect = 0.13
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWID 38
P++L G PGTGK++ + K+ + +
Sbjct: 29 KSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMK 64
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 29.6 bits (65), Expect = 0.14
Identities = 8/31 (25%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVN 40
I++ G P GK+ + +++ + L +I V
Sbjct: 5 IVMVGLPARGKTYISKKLTR---YLNFIGVP 32
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 29.9 bits (67), Expect = 0.14
Identities = 11/50 (22%), Positives = 17/50 (34%)
Query: 5 RTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDE 54
+ +LITG G GK + + K D + V + E
Sbjct: 21 CAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 30.0 bits (67), Expect = 0.14
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 7 KPNILITGTPGTGKSTLCEEVVKQCD 32
K L G +GK+TL +++ C
Sbjct: 154 KRYWLFKGPIDSGKTTLAAALLELCG 179
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 29.6 bits (65), Expect = 0.16
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
L++GT GTGK+ + +
Sbjct: 29 TLVSGTSGTGKTLFSIQFLYNG 50
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 29.2 bits (64), Expect = 0.21
Identities = 5/15 (33%), Positives = 6/15 (40%)
Query: 10 ILITGTPGTGKSTLC 24
+ G GKS L
Sbjct: 32 GALVSPGGAGKSMLA 46
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 29.2 bits (65), Expect = 0.22
Identities = 5/33 (15%), Positives = 13/33 (39%)
Query: 1 MSSKRTKPNILITGTPGTGKSTLCEEVVKQCDS 33
+ +++TG +GK+ L + +
Sbjct: 117 GGHRYASGMVIVTGKGNSGKTPLVHALGEALGG 149
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 29.3 bits (64), Expect = 0.22
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 10 ILITGTPGTGKSTLC 24
+ G G+GK+ L
Sbjct: 39 TEVFGEFGSGKTQLA 53
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain
(RecD) {Escherichia coli [TaxId: 562]}
Length = 359
Score = 29.1 bits (64), Expect = 0.23
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 6 TKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIAR 44
T+ +I+G PGTGK+T +++ + + +I
Sbjct: 162 TRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRL 200
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 28.9 bits (64), Expect = 0.24
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 4 KRTKPNILITGTPGTGKSTLCEEVVKQ 30
K +ILI G + + E+ +
Sbjct: 12 KSEGISILINGEDLSYPREVSLELPEY 38
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.8 bits (63), Expect = 0.24
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
++++G G GKSTL +++ ++ S+ V+ R
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRN 38
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 29.1 bits (65), Expect = 0.25
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 3 SKRTKPNILITGTPGTGKSTLCEEVVKQ 30
SK+ P I +TG+ G G ST+ +
Sbjct: 1 SKKH-PIISVTGSSGAGTSTVKHTFDQI 27
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 28.8 bits (63), Expect = 0.29
Identities = 9/37 (24%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 2 SSKRTKP-NILITGTPGTGKSTLCEEVVKQCDSLEWI 37
+S RT ++L+ G P +GK+ L ++ ++ +
Sbjct: 34 NSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIK 70
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 28.4 bits (62), Expect = 0.33
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
I ++G +GKS++C ++V+
Sbjct: 5 IGVSGGTASGKSSVCAKIVQL 25
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 28.5 bits (62), Expect = 0.34
Identities = 4/22 (18%), Positives = 8/22 (36%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
G G+GK+ + +
Sbjct: 37 TEFAGVFGSGKTQIMHQSCVNL 58
>d2g3ra1 b.34.9.1 (A:1485-1537) p53-binding protein 1, 53BP1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 26.5 bits (58), Expect = 0.40
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 39 VNKIARENQFYLKYDEQYECPELDEDKLL 67
+ + ++ L +D+ YEC L +D LL
Sbjct: 22 ITRDVGAGKYKLLFDDGYECDVLGKDILL 50
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 28.0 bits (61), Expect = 0.44
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Query: 6 TKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDV---NKIARENQFYLKYDEQYECPE 60
++P I+I+G GTGKSTL +++ + V + R + K E
Sbjct: 1 SRP-IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDE 57
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha,
N-terminal (G) domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 239
Score = 28.1 bits (62), Expect = 0.55
Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 5 RTKP--NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
+ K N+++ G +GKST ++ +C ++ + K +E
Sbjct: 2 KEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKE 44
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 27.8 bits (61), Expect = 0.57
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
I +G G+GKS ++
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNH 50
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 27.8 bits (60), Expect = 0.58
Identities = 8/46 (17%), Positives = 13/46 (28%)
Query: 4 KRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFY 49
++ G PG GK+T V ++ R
Sbjct: 49 SGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLL 94
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 27.9 bits (61), Expect = 0.65
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 8/64 (12%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ--------CDSLEWIDVNKIARENQFYLKYDEQYECPEL 61
+ + G G+GKS + + + + DS+ W+ + A ++ F L D
Sbjct: 47 LFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSE 106
Query: 62 DEDK 65
D+
Sbjct: 107 DDLL 110
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 27.2 bits (59), Expect = 0.94
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 8 PNILITGTPGTGKSTLCEEVVKQ 30
L+TG G GK+TL ++ +
Sbjct: 4 AVTLLTGFLGAGKTTLLRHILNE 26
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 27.5 bits (60), Expect = 0.96
Identities = 11/58 (18%), Positives = 21/58 (36%)
Query: 1 MSSKRTKPNILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYEC 58
+ + T NIL+ G G GK+ + + K ++ E + K +
Sbjct: 43 LRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIR 100
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 27.4 bits (60), Expect = 1.0
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 5 RTKPNILITGTPGTGKSTL 23
+ N+ +TG G+GKS+
Sbjct: 54 SSVLNVAVTGETGSGKSSF 72
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus
thermophilus [TaxId: 274]}
Length = 318
Score = 27.2 bits (60), Expect = 1.1
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 3/50 (6%)
Query: 11 LITGTPGTGKSTL---CEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYE 57
+ G GTGK+TL E + D W + E Y K
Sbjct: 18 VFFGLSGTGKTTLSTDPERPLIGDDEHGWSEDGVFNFEGGCYAKVIRLSP 67
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit,
N-terminal (G) domain {Sulfolobus solfataricus [TaxId:
2287]}
Length = 205
Score = 26.8 bits (58), Expect = 1.1
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 4 KRTKP--NILITGTPGTGKSTLCEEVVKQCDS 33
+ +P NI + G GK+TL + + S
Sbjct: 3 PKVQPEVNIGVVGHVDHGKTTLVQAITGIWTS 34
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 26.5 bits (57), Expect = 1.3
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEW 36
++++G GKST+ + ++ +L +
Sbjct: 5 VVLSGPSAVGKSTVVRCLRERIPNLHF 31
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 26.9 bits (58), Expect = 1.3
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
L+ G PG+GK++L + ++
Sbjct: 35 FLLGGQPGSGKTSLRSAIFEET 56
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 26.9 bits (59), Expect = 1.4
Identities = 14/75 (18%), Positives = 22/75 (29%), Gaps = 11/75 (14%)
Query: 11 LITGTPGTGKSTL---CEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLL 67
+ G GTGK+TL + + D W D E Y K K
Sbjct: 18 VFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDDGVFNFEGGCYAKTI--------KLSKEA 69
Query: 68 DELEPRVQGGGKIID 82
+ +++
Sbjct: 70 EPEIYNAIRRDALLE 84
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 26.6 bits (58), Expect = 1.4
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
I I G+ GKST +
Sbjct: 83 ISIAGSVAVGKSTTARVLQAL 103
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 26.4 bits (57), Expect = 1.7
Identities = 3/21 (14%), Positives = 11/21 (52%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
+++ G G G+ + ++ +
Sbjct: 6 LVLLGAHGVGRRHIKNTLITK 26
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 26.5 bits (57), Expect = 1.7
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 4 KRTKPNILITGTPGTGKSTLCEEVVKQCDS 33
++L+ G PG GK+TL + + +
Sbjct: 32 GEVLDHVLLAGPPGLGKTTLAHIIASELQT 61
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 26.2 bits (56), Expect = 1.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 8 PNILITGTPGTGKSTL 23
++ + G P GKS+L
Sbjct: 2 ADVGLVGYPNAGKSSL 17
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 26.1 bits (56), Expect = 2.1
Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 12/144 (8%)
Query: 2 SSKRTKPN-ILITGTPGTGKSTLCEEVVKQCDSL--------EWIDVN-KIARENQFYLK 51
++ T+P +LI G G+GK+T K + + +W +VN E +
Sbjct: 3 YAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKDP 62
Query: 52 YDEQYECPELDEDKLLDELEPRVQGGGKIIDYH--SAEMFPERWIDQVYVLSADNTTLYD 109
+L KI++ SA + + L +
Sbjct: 63 KKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLE 122
Query: 110 RLVEKGQSGKKLQDNLQCEIFQTI 133
+ + +Q +L + +
Sbjct: 123 EWYKFIEESIHVQADLIIYLRTSP 146
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 26.3 bits (57), Expect = 2.2
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 2 SSKRTKPNILITGTPGTGKSTLCEEVVKQ 30
IL+ G G GKS+ ++ +
Sbjct: 27 QEDVNSLTILVMGKGGVGKSSTVNSIIGE 55
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 26.1 bits (56), Expect = 2.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 7 KPNILITGTPGTGKSTL 23
+P+I+I G +GK++L
Sbjct: 3 QPSIIIAGPQNSGKTSL 19
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 26.3 bits (57), Expect = 2.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 6 TKPNILITGTPGTGKSTLCEEVVK 29
T NIL+ G G GK+ + + K
Sbjct: 48 TPKNILMIGPTGVGKTEIARRLAK 71
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 26.0 bits (56), Expect = 2.6
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
+ +TG G+GKST+ + ID + IAR+
Sbjct: 6 VALTGGIGSGKSTVANAFADL--GINVIDADIIARQ 39
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 26.0 bits (56), Expect = 2.6
Identities = 6/18 (33%), Positives = 9/18 (50%)
Query: 5 RTKPNILITGTPGTGKST 22
R K ++ PG GK+
Sbjct: 7 RKKRLTIMDLHPGAGKTK 24
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus
influenzae [TaxId: 727]}
Length = 205
Score = 25.6 bits (55), Expect = 2.7
Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
+ +TG G+GK+T+ + +D + +ARE
Sbjct: 5 VGLTGGIGSGKTTIANLFTDL--GVPLVDADVVARE 38
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 25.7 bits (55), Expect = 2.8
Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 2/104 (1%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
I ITG G+GKST+ + +D++ +A + + + + PE LD
Sbjct: 6 IGITGNIGSGKSTVAALLRSW--GYPVLDLDALAARARENKEEELKRLFPEAVVGGRLDR 63
Query: 70 LEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADNTTLYDRLVE 113
+ E + ++ + +E
Sbjct: 64 RALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLE 107
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor
Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 25.7 bits (56), Expect = 2.9
Identities = 8/49 (16%), Positives = 16/49 (32%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYEC 58
LI P GK+ L + + + V + ++ + E
Sbjct: 46 GLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRL 94
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 25.6 bits (55), Expect = 2.9
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLE-WIDVNKIARENQFYLKYDEQYECPELDEDK 65
+++ G GKS+L + ++K + + V+ R+ + + E Y DE K
Sbjct: 5 YIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFK 61
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 25.3 bits (54), Expect = 4.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 10 ILITGTPGTGKSTLCEEVVK 29
I+I G G GK+T VV+
Sbjct: 5 IVIEGLEGAGKTTARNVVVE 24
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain
{Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Length = 267
Score = 25.3 bits (55), Expect = 4.1
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 10 ILITGTPGTGKSTLCEEVVK 29
I + G TGK+ + E +
Sbjct: 107 IWLFGPATTGKTNIAEAIAH 126
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 25.3 bits (54), Expect = 4.1
Identities = 6/36 (16%), Positives = 16/36 (44%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARE 45
I ++G +GK T + ++ ++++ I
Sbjct: 4 IFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDA 39
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 25.4 bits (54), Expect = 4.1
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 9 NILITGTPGTGKSTL 23
+L G +GK+ L
Sbjct: 2 AVLFVGLCDSGKTLL 16
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain
{Human papillomavirus type 18 [TaxId: 333761]}
Length = 205
Score = 25.2 bits (55), Expect = 4.4
Identities = 6/23 (26%), Positives = 9/23 (39%)
Query: 7 KPNILITGTPGTGKSTLCEEVVK 29
K ++ G TGKS +
Sbjct: 53 KNCLVFCGPANTGKSYFGMSFIH 75
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 25.0 bits (53), Expect = 4.4
Identities = 15/95 (15%), Positives = 24/95 (25%), Gaps = 2/95 (2%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPELDEDKLLDE 69
I I G G GK TL E++ + V ++ L +
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFRA-AGRSV-ATLAFPRYGQSVAADIAAEALHGEHGDLA 60
Query: 70 LEPRVQGGGKIIDYHSAEMFPERWIDQVYVLSADN 104
+D A + V+ D
Sbjct: 61 SSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDR 95
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas
syringae pv. tomato [TaxId: 323]}
Length = 222
Score = 25.2 bits (54), Expect = 4.5
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 1 MSSKRTKP--NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQ 47
+ K L G GKSTL ++ + + I R+++
Sbjct: 1 LGQHERKEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSK 49
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 25.4 bits (55), Expect = 4.9
Identities = 15/117 (12%), Positives = 37/117 (31%), Gaps = 15/117 (12%)
Query: 38 DVNKIARENQFYLKYDEQYECPELDEDKLLDELEPRVQGGGKIIDYHSAEMFPERWIDQV 97
V ++ + Y E+Y+ +D + P + GK+I+Y P + +Q+
Sbjct: 58 SVTTAKLQSILFSNYMEEYK---VDFKRSTAIYNP-MSEIGKLIEYSCLVFLPSPYAEQL 113
Query: 98 YVLSADNTTLYDRLVEKGQSGKKLQDNLQ-CEIFQTILEEARDSYKEDIVVSLPSNT 153
+ + + ++ ++ E I+ L +
Sbjct: 114 K-------ETILPDLNASFDNSDTKGFVNAINLYNKMIREIPRQ---RIIDHLETID 160
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 24.9 bits (53), Expect = 5.0
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 10 ILITGTPGTGKSTLCEEVVK 29
I++ G GKST ++V+
Sbjct: 6 IVLEGVDRAGKSTQSRKLVE 25
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 25.2 bits (55), Expect = 5.0
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 10 ILITGTPGTGKSTLCEEVVKQCD 32
+L+ G PGTGK+ L + + +
Sbjct: 48 VLMVGPPGTGKTLLAKAIAGEAK 70
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 24.7 bits (52), Expect = 5.7
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 8 PNILITGTPGTGKSTL 23
P I + G GKS+
Sbjct: 24 PEIALAGRSNVGKSSF 39
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 24.6 bits (53), Expect = 5.9
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 7 KP--NILITGTPGTGKSTLCEEVVKQC 31
KP N+ G GK+TL + K
Sbjct: 1 KPHVNVGTIGHVDHGKTTLTAAITKIL 27
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 24.8 bits (53), Expect = 6.1
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQ 47
NI+ G GKSTL ++ ++ + KI RE +
Sbjct: 26 NIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAK 64
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 24.7 bits (54), Expect = 6.1
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
I + G G GK+ L E++
Sbjct: 71 IGLFGGAGVGKTVLIMELINN 91
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 24.5 bits (52), Expect = 6.4
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 8 PNILITGTPGTGKSTL 23
++ + G P GKSTL
Sbjct: 2 ADVGLVGFPSVGKSTL 17
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 24.7 bits (53), Expect = 6.5
Identities = 7/19 (36%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
Query: 7 KPN-ILITGTPGTGKSTLC 24
K +L+ G G GK+T
Sbjct: 5 KGRVVLVVGVNGVGKTTTI 23
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha,
N-terminal (G) domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 224
Score = 24.8 bits (53), Expect = 6.7
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 7 KP--NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYEC 58
KP N+++ G GKSTL ++ ++ V + + K E++
Sbjct: 1 KPHLNLIVIGHVDHGKSTLVGRLLMDRGFIDEKTVKEAEEAAKKLGKESEKFAF 54
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 24.3 bits (51), Expect = 7.0
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLEWIDVNKIARENQFYLKYDEQYECPE 60
N+ I G GK+TL + + + + +K+ + + D + +
Sbjct: 7 NLGIFGHIDHGKTTLSKVLTEIAST---SAHDKLPESQKRGITIDIGFSAFK 55
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 24.6 bits (52), Expect = 7.2
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 10 ILITGTPGTGKSTLC 24
+ TG G GK+++
Sbjct: 11 LFFTGKGGVGKTSIS 25
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 24.7 bits (52), Expect = 7.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 10 ILITGTPGTGKSTL 23
LI G G+GKS+L
Sbjct: 26 NLIIGQNGSGKSSL 39
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 24.3 bits (52), Expect = 7.6
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 10 ILITGTPGTGKSTLCEEVVKQC 31
+ + G G GK+TL +++
Sbjct: 36 VYLNGDLGAGKTTLTRGMLQGI 57
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 24.5 bits (52), Expect = 8.0
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 9 NILITGTPGTGKSTLCEEVVKQCDSLE 35
+ + G G+GK+TL E ++ + + E
Sbjct: 4 TVALVGHAGSGKTTLTEALLYKTGAKE 30
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 24.3 bits (52), Expect = 9.0
Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Query: 6 TKPN-ILITGTPGTGKSTLC 24
P I++ G GTGK+T C
Sbjct: 9 EPPFVIMVVGVNGTGKTTSC 28
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 24.4 bits (52), Expect = 9.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 7 KPNILITGTPGTGKSTLCE 25
P I + G GKS++ E
Sbjct: 26 LPQIAVVGGQSAGKSSVLE 44
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 23.9 bits (50), Expect = 9.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 9 NILITGTPGTGKSTL 23
++I G P GKS+L
Sbjct: 3 KVVIAGRPNAGKSSL 17
>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase
{Loblolly pine (Pinus taeda) [TaxId: 3352]}
Length = 307
Score = 24.4 bits (51), Expect = 9.5
Identities = 5/27 (18%), Positives = 11/27 (40%), Gaps = 4/27 (14%)
Query: 6 TKPNILITGTPGTGK--STLCEEVVKQ 30
++ IL+ G TG + + +
Sbjct: 2 SRSRILLIG--ATGYIGRHVAKASLDL 26
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 24.0 bits (50), Expect = 9.7
Identities = 4/17 (23%), Positives = 6/17 (35%)
Query: 7 KPNILITGTPGTGKSTL 23
+ G GKS+
Sbjct: 16 GIEVAFAGRSNAGKSSA 32
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 24.1 bits (51), Expect = 9.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 10 ILITGTPGTGKSTLCEEVVKQ 30
ILI G TGK+T C + K+
Sbjct: 6 ILIEGLDRTGKTTQCNILYKK 26
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.133 0.387
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 660,197
Number of extensions: 30436
Number of successful extensions: 315
Number of sequences better than 10.0: 1
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 168
Length of query: 172
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 93
Effective length of database: 1,322,926
Effective search space: 123032118
Effective search space used: 123032118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (24.0 bits)