Query psy6665
Match_columns 420
No_of_seqs 431 out of 1203
Neff 11.1
Searched_HMMs 46136
Date Fri Aug 16 23:59:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569|consensus 100.0 2.1E-40 4.4E-45 301.5 34.2 367 7-389 61-472 (485)
2 PRK10077 xylE D-xylose transpo 100.0 3.9E-34 8.4E-39 272.9 35.6 364 2-388 51-474 (479)
3 TIGR01299 synapt_SV2 synaptic 100.0 4.8E-34 1E-38 276.6 33.8 358 2-378 198-740 (742)
4 TIGR00887 2A0109 phosphate:H+ 100.0 1.8E-34 3.8E-39 275.6 30.5 357 7-383 57-500 (502)
5 KOG0254|consensus 100.0 3E-33 6.5E-38 267.1 31.4 367 7-389 90-501 (513)
6 PRK10642 proline/glycine betai 100.0 8.8E-33 1.9E-37 262.9 30.8 335 12-378 63-436 (490)
7 TIGR00879 SP MFS transporter, 100.0 2.4E-32 5.1E-37 260.8 31.6 363 3-379 68-478 (481)
8 TIGR00898 2A0119 cation transp 100.0 3.5E-32 7.6E-37 260.9 30.6 350 5-380 126-503 (505)
9 PF00083 Sugar_tr: Sugar (and 100.0 2.7E-38 5.9E-43 299.0 -17.7 361 7-385 47-450 (451)
10 COG2271 UhpC Sugar phosphate p 100.0 2.3E-32 5E-37 238.2 18.7 345 2-372 60-435 (448)
11 TIGR02332 HpaX 4-hydroxyphenyl 100.0 7.6E-31 1.6E-35 244.1 28.3 336 1-360 38-410 (412)
12 PRK11663 regulatory protein Uh 100.0 1.1E-30 2.4E-35 245.0 28.2 349 1-374 53-427 (434)
13 PRK09556 uhpT sugar phosphate 100.0 3.5E-31 7.6E-36 250.8 23.0 343 1-368 59-446 (467)
14 PRK09705 cynX putative cyanate 100.0 4.5E-30 9.7E-35 237.7 29.5 329 1-378 39-388 (393)
15 PRK11551 putative 3-hydroxyphe 100.0 6.1E-30 1.3E-34 238.7 29.5 329 1-368 45-393 (406)
16 PRK12307 putative sialic acid 100.0 1.3E-29 2.9E-34 238.0 31.3 320 1-351 48-388 (426)
17 TIGR00893 2A0114 d-galactonate 100.0 5.4E-30 1.2E-34 238.4 25.7 345 1-368 24-396 (399)
18 PRK03545 putative arabinose tr 100.0 4.2E-29 9.2E-34 231.5 30.9 321 1-371 39-380 (390)
19 COG2814 AraJ Arabinose efflux 100.0 8.2E-29 1.8E-33 219.2 30.9 318 1-370 43-385 (394)
20 TIGR00903 2A0129 major facilit 100.0 2E-29 4.3E-34 229.9 27.9 319 1-368 21-362 (368)
21 PRK10406 alpha-ketoglutarate t 100.0 2.9E-29 6.3E-34 235.4 29.5 315 9-368 66-421 (432)
22 PRK09952 shikimate transporter 100.0 1.2E-28 2.7E-33 231.2 33.5 322 13-374 71-435 (438)
23 PRK11273 glpT sn-glycerol-3-ph 100.0 6.1E-29 1.3E-33 234.5 29.7 343 2-370 59-434 (452)
24 TIGR00891 2A0112 putative sial 100.0 1.6E-28 3.4E-33 229.3 29.4 333 1-352 42-397 (405)
25 TIGR00890 2A0111 Oxalate/Forma 100.0 8.5E-29 1.8E-33 228.8 25.7 321 1-364 33-375 (377)
26 PRK15075 citrate-proton sympor 100.0 1.9E-28 4.1E-33 230.0 26.3 290 16-347 66-396 (434)
27 TIGR00892 2A0113 monocarboxyla 100.0 2.5E-29 5.5E-34 236.7 20.1 340 1-365 49-415 (455)
28 PRK03893 putative sialic acid 100.0 7.5E-28 1.6E-32 230.6 30.0 342 1-362 50-444 (496)
29 KOG0255|consensus 100.0 1.3E-27 2.8E-32 229.7 31.5 355 4-383 116-504 (521)
30 PLN00028 nitrate transmembrane 100.0 1.4E-28 3E-33 232.8 23.6 327 1-368 66-430 (476)
31 PRK10489 enterobactin exporter 100.0 2.4E-28 5.2E-33 228.6 24.8 338 3-383 49-411 (417)
32 PRK05122 major facilitator sup 100.0 1.8E-27 3.9E-32 221.6 29.6 316 1-369 46-387 (399)
33 TIGR00712 glpT glycerol-3-phos 100.0 2.4E-28 5.3E-33 229.6 23.9 348 2-375 57-437 (438)
34 PRK03699 putative transporter; 100.0 1.4E-27 3E-32 221.5 26.6 319 1-367 37-376 (394)
35 PRK10091 MFS transport protein 100.0 5.5E-27 1.2E-31 216.6 29.6 322 1-372 33-377 (382)
36 TIGR00894 2A0114euk Na(+)-depe 100.0 1.8E-28 3.8E-33 232.7 20.1 337 2-368 72-447 (465)
37 KOG0252|consensus 100.0 1.3E-29 2.9E-34 222.1 9.5 363 6-385 84-511 (538)
38 PRK12382 putative transporter; 100.0 1.2E-26 2.7E-31 215.3 29.8 317 1-370 46-388 (392)
39 KOG2532|consensus 100.0 9.5E-28 2.1E-32 221.7 19.9 335 2-370 69-446 (466)
40 TIGR00900 2A0121 H+ Antiporter 100.0 1.3E-26 2.8E-31 213.3 27.0 308 2-347 30-365 (365)
41 PRK10213 nepI ribonucleoside t 100.0 7.2E-26 1.6E-30 209.5 31.7 316 1-366 50-386 (394)
42 TIGR00895 2A0115 benzoate tran 100.0 1.4E-26 3E-31 215.6 27.1 321 2-342 48-397 (398)
43 TIGR00881 2A0104 phosphoglycer 100.0 1.2E-27 2.7E-32 221.2 19.9 325 1-351 25-377 (379)
44 PRK03633 putative MFS family t 100.0 6.2E-26 1.3E-30 209.6 30.6 317 1-366 36-367 (381)
45 TIGR00897 2A0118 polyol permea 100.0 4.4E-26 9.6E-31 211.9 29.8 324 2-368 44-398 (402)
46 TIGR00883 2A0106 metabolite-pr 100.0 1.3E-26 2.7E-31 215.6 26.1 303 13-355 42-385 (394)
47 PRK14995 methyl viologen resis 100.0 7.4E-27 1.6E-31 222.5 22.6 325 1-345 36-413 (495)
48 KOG0253|consensus 100.0 1.5E-26 3.2E-31 197.1 20.0 350 7-378 114-526 (528)
49 PRK15402 multidrug efflux syst 100.0 1.6E-25 3.5E-30 208.8 28.9 304 1-347 43-372 (406)
50 PRK15034 nitrate/nitrite trans 100.0 1.5E-25 3.4E-30 205.6 28.1 321 1-372 65-455 (462)
51 cd06174 MFS The Major Facilita 100.0 2.1E-25 4.5E-30 204.0 29.1 299 2-368 30-349 (352)
52 PRK09874 drug efflux system pr 100.0 1.2E-25 2.6E-30 210.1 27.6 318 9-371 57-398 (408)
53 PRK10504 putative transporter; 99.9 2.4E-25 5.2E-30 211.8 29.2 325 2-347 41-417 (471)
54 PF07690 MFS_1: Major Facilita 99.9 7.4E-26 1.6E-30 207.2 24.1 299 1-336 27-352 (352)
55 TIGR00711 efflux_EmrB drug res 99.9 2.5E-26 5.3E-31 219.7 21.6 326 1-346 32-411 (485)
56 TIGR00899 2A0120 sugar efflux 99.9 4.7E-25 1E-29 203.8 29.3 319 1-367 28-370 (375)
57 TIGR00710 efflux_Bcr_CflA drug 99.9 3.3E-25 7.1E-30 205.5 28.3 300 1-344 35-360 (385)
58 PRK10473 multidrug efflux syst 99.9 3.7E-25 8E-30 205.5 26.3 306 2-358 34-361 (392)
59 PRK11102 bicyclomycin/multidru 99.9 8.1E-25 1.8E-29 202.2 28.4 296 2-339 22-343 (377)
60 PRK11195 lysophospholipid tran 99.9 1.5E-24 3.4E-29 200.6 28.1 328 2-370 34-379 (393)
61 PRK11646 multidrug resistance 99.9 1.6E-24 3.4E-29 201.0 27.9 319 2-366 42-383 (400)
62 COG2223 NarK Nitrate/nitrite t 99.9 2.8E-25 6.1E-30 194.5 21.0 323 1-371 44-401 (417)
63 KOG1330|consensus 99.9 5.9E-28 1.3E-32 212.7 4.1 314 1-350 63-417 (493)
64 PRK15403 multidrug efflux syst 99.9 2.6E-24 5.7E-29 200.2 28.6 319 1-364 46-390 (413)
65 PRK11043 putative transporter; 99.9 4.8E-24 1E-28 198.6 29.5 299 2-347 37-359 (401)
66 PRK10054 putative transporter; 99.9 3.3E-24 7.2E-29 198.5 28.1 321 1-368 38-381 (395)
67 TIGR00896 CynX cyanate transpo 99.9 4E-24 8.7E-29 195.8 25.5 301 1-349 30-352 (355)
68 PRK10133 L-fucose transporter; 99.9 8.4E-24 1.8E-28 197.8 27.8 319 1-363 56-425 (438)
69 TIGR00885 fucP L-fucose:H+ sym 99.9 1.3E-23 2.7E-28 194.9 27.8 309 1-355 33-396 (410)
70 PRK15011 sugar efflux transpor 99.9 3.7E-23 8E-28 191.8 30.7 323 1-373 46-392 (393)
71 PRK09528 lacY galactoside perm 99.9 9.8E-24 2.1E-28 197.6 26.7 341 1-373 41-405 (420)
72 PRK11010 ampG muropeptide tran 99.9 1.7E-23 3.7E-28 198.5 28.4 306 21-369 60-401 (491)
73 KOG2533|consensus 99.9 7.3E-24 1.6E-28 196.3 21.5 327 3-353 78-438 (495)
74 TIGR00902 2A0127 phenyl propri 99.9 3.2E-22 6.9E-27 184.8 29.4 317 1-366 34-374 (382)
75 PRK08633 2-acyl-glycerophospho 99.9 1.3E-22 2.8E-27 213.5 27.6 320 8-364 49-403 (1146)
76 PRK11652 emrD multidrug resist 99.9 9.8E-22 2.1E-26 182.6 30.5 299 1-345 38-360 (394)
77 TIGR00889 2A0110 nucleoside tr 99.9 5.3E-22 1.2E-26 184.8 28.3 329 2-377 34-408 (418)
78 PRK06814 acylglycerophosphoeth 99.9 1.8E-22 3.8E-27 211.7 27.4 321 8-366 54-417 (1140)
79 PF05977 MFS_3: Transmembrane 99.9 7.9E-22 1.7E-26 185.7 28.5 323 4-367 43-390 (524)
80 TIGR00882 2A0105 oligosacchari 99.9 5.2E-22 1.1E-26 184.5 27.1 329 1-368 33-392 (396)
81 TIGR00792 gph sugar (Glycoside 99.9 2.6E-22 5.6E-27 189.3 23.3 306 1-347 30-382 (437)
82 PRK11128 putative 3-phenylprop 99.9 2.1E-21 4.6E-26 179.4 28.9 316 1-366 34-374 (382)
83 TIGR00886 2A0108 nitrite extru 99.9 1E-22 2.2E-27 187.5 19.7 296 1-331 32-365 (366)
84 PRK11902 ampG muropeptide tran 99.9 2.1E-21 4.5E-26 180.8 28.1 318 2-367 30-386 (402)
85 KOG2504|consensus 99.9 3.4E-23 7.4E-28 193.9 14.1 352 2-368 77-473 (509)
86 COG0738 FucP Fucose permease [ 99.9 5.6E-21 1.2E-25 166.5 23.9 319 1-365 43-403 (422)
87 TIGR00901 2A0125 AmpG-related 99.9 2.6E-21 5.7E-26 177.3 22.9 288 2-329 19-355 (356)
88 KOG3764|consensus 99.9 1.1E-22 2.4E-27 175.8 12.6 319 3-369 103-452 (464)
89 PRK10207 dipeptide/tripeptide 99.9 6E-21 1.3E-25 180.3 23.2 353 1-369 45-474 (489)
90 KOG2615|consensus 99.9 1.3E-21 2.7E-26 168.3 16.4 313 9-347 71-416 (451)
91 TIGR00924 yjdL_sub1_fam amino 99.9 2.8E-20 6.1E-25 175.7 26.3 354 1-371 43-468 (475)
92 COG2807 CynX Cyanate permease 99.9 4.2E-20 9.1E-25 158.6 23.8 320 2-369 43-383 (395)
93 PF11700 ATG22: Vacuole efflux 99.9 2.2E-19 4.8E-24 167.4 28.7 335 8-375 72-471 (477)
94 TIGR00806 rfc RFC reduced fola 99.9 4.6E-20 1E-24 166.4 20.4 321 1-339 56-409 (511)
95 TIGR00805 oat sodium-independe 99.9 7.8E-21 1.7E-25 184.4 14.4 249 1-271 63-397 (633)
96 PF06609 TRI12: Fungal trichot 99.8 4.2E-19 9.2E-24 166.7 24.8 317 7-343 79-465 (599)
97 TIGR02718 sider_RhtX_FptX side 99.8 1.1E-18 2.4E-23 161.9 27.4 319 2-366 32-386 (390)
98 PRK10429 melibiose:sodium symp 99.8 6.6E-19 1.4E-23 167.1 23.0 315 2-347 38-395 (473)
99 TIGR01301 GPH_sucrose GPH fami 99.8 8.9E-18 1.9E-22 155.7 28.3 358 2-376 35-476 (477)
100 PTZ00207 hypothetical protein; 99.8 2.2E-18 4.8E-23 163.0 23.7 353 1-375 57-556 (591)
101 PRK09584 tppB putative tripept 99.8 3.1E-18 6.7E-23 162.8 23.9 129 2-143 53-192 (500)
102 PRK09669 putative symporter Ya 99.8 5.2E-18 1.1E-22 159.9 23.7 311 1-347 40-390 (444)
103 COG2270 Permeases of the major 99.8 3.4E-17 7.4E-22 144.0 23.0 336 6-374 58-431 (438)
104 PRK15462 dipeptide/tripeptide 99.8 1.5E-16 3.3E-21 148.2 25.7 128 2-142 41-179 (493)
105 PF01306 LacY_symp: LacY proto 99.8 1.3E-16 2.8E-21 143.5 22.3 342 2-376 39-405 (412)
106 PF13347 MFS_2: MFS/sugar tran 99.8 4.4E-17 9.5E-22 152.9 18.7 313 2-347 33-386 (428)
107 PF03825 Nuc_H_symport: Nucleo 99.8 1.2E-15 2.5E-20 140.0 27.2 328 2-373 33-397 (400)
108 PRK11462 putative transporter; 99.8 8.2E-16 1.8E-20 144.9 26.9 309 2-347 41-389 (460)
109 PRK09848 glucuronide transport 99.7 6.8E-16 1.5E-20 145.8 25.4 308 2-347 40-390 (448)
110 KOG4686|consensus 99.7 3.4E-18 7.4E-23 141.3 7.9 306 7-350 80-419 (459)
111 COG2211 MelB Na+/melibiose sym 99.7 4E-16 8.6E-21 141.8 21.6 310 2-347 44-398 (467)
112 TIGR01272 gluP glucose/galacto 99.7 3.1E-16 6.7E-21 139.8 20.5 250 75-357 17-301 (310)
113 TIGR00788 fbt folate/biopterin 99.7 9.6E-17 2.1E-21 151.3 17.9 319 1-347 56-415 (468)
114 PF03209 PUCC: PUCC protein; 99.6 1.6E-11 3.5E-16 108.9 28.5 311 6-345 15-363 (403)
115 KOG2563|consensus 99.5 1.4E-13 3E-18 122.1 14.5 326 10-373 83-452 (480)
116 COG3104 PTR2 Dipeptide/tripept 99.5 1.7E-12 3.6E-17 117.4 20.7 353 2-370 57-486 (498)
117 TIGR00895 2A0115 benzoate tran 99.5 2.3E-13 5E-18 126.7 13.8 153 222-375 32-196 (398)
118 TIGR02332 HpaX 4-hydroxyphenyl 99.5 2.1E-12 4.5E-17 120.6 18.4 170 206-376 7-194 (412)
119 PF03137 OATP: Organic Anion T 99.5 2.7E-15 5.9E-20 142.2 -1.1 341 1-346 33-515 (539)
120 KOG2325|consensus 99.5 1.5E-12 3.2E-17 119.0 14.5 111 4-128 69-188 (488)
121 PRK11663 regulatory protein Uh 99.5 2.1E-12 4.5E-17 121.6 16.0 163 211-374 27-201 (434)
122 KOG3626|consensus 99.4 1.3E-12 2.9E-17 124.2 13.8 256 5-270 131-458 (735)
123 PRK10054 putative transporter; 99.4 5.9E-12 1.3E-16 116.8 17.8 153 220-374 20-185 (395)
124 PRK03545 putative arabinose tr 99.4 8.3E-12 1.8E-16 115.9 18.9 149 225-374 27-187 (390)
125 TIGR00710 efflux_Bcr_CflA drug 99.4 3.7E-12 8E-17 118.1 16.4 154 222-376 20-185 (385)
126 COG2814 AraJ Arabinose efflux 99.4 1E-11 2.3E-16 110.9 18.0 165 206-372 13-189 (394)
127 TIGR00893 2A0114 d-galactonate 99.4 2E-12 4.3E-17 120.3 14.1 152 224-376 11-174 (399)
128 KOG2816|consensus 99.4 3.4E-12 7.5E-17 118.2 14.8 299 16-345 72-392 (463)
129 TIGR01299 synapt_SV2 synaptic 99.4 2.2E-11 4.8E-16 119.4 20.3 151 224-375 184-358 (742)
130 PRK10213 nepI ribonucleoside t 99.4 2E-11 4.3E-16 113.3 18.9 149 225-374 38-198 (394)
131 PRK10473 multidrug efflux syst 99.4 9.5E-12 2.1E-16 115.6 16.7 167 209-376 5-183 (392)
132 TIGR00891 2A0112 putative sial 99.4 2.3E-11 4.9E-16 113.6 18.4 167 207-374 12-191 (405)
133 PRK11551 putative 3-hydroxyphe 99.4 1.2E-11 2.6E-16 115.6 16.0 159 216-375 24-194 (406)
134 TIGR00711 efflux_EmrB drug res 99.4 8.9E-12 1.9E-16 119.3 14.7 160 215-375 10-181 (485)
135 COG2271 UhpC Sugar phosphate p 99.4 4.8E-12 1E-16 111.8 11.5 172 204-376 26-211 (448)
136 PRK10504 putative transporter; 99.4 4.4E-11 9.5E-16 114.1 18.5 162 212-374 15-188 (471)
137 PRK14995 methyl viologen resis 99.4 5.1E-11 1.1E-15 114.0 18.3 165 210-375 9-186 (495)
138 PRK10091 MFS transport protein 99.4 4.3E-11 9.4E-16 110.7 17.3 152 223-375 19-182 (382)
139 TIGR00880 2_A_01_02 Multidrug 99.4 7.4E-12 1.6E-16 98.0 10.4 118 14-144 6-130 (141)
140 TIGR00900 2A0121 H+ Antiporter 99.3 2.4E-11 5.2E-16 111.7 15.3 145 223-368 15-176 (365)
141 PRK09874 drug efflux system pr 99.3 9.2E-11 2E-15 109.7 19.2 151 222-374 29-196 (408)
142 PRK10642 proline/glycine betai 99.3 1.8E-11 3.9E-16 117.0 14.5 152 3-167 283-459 (490)
143 TIGR00903 2A0129 major facilit 99.3 4.7E-11 1E-15 109.3 16.0 151 224-376 8-170 (368)
144 PRK15403 multidrug efflux syst 99.3 7.3E-11 1.6E-15 110.2 17.6 150 226-376 35-196 (413)
145 PLN00028 nitrate transmembrane 99.3 5.2E-11 1.1E-15 113.2 16.7 150 222-373 51-221 (476)
146 PF07690 MFS_1: Major Facilita 99.3 1.8E-11 4E-16 111.9 13.2 151 223-374 12-175 (352)
147 PF03092 BT1: BT1 family; Int 99.3 2.2E-10 4.8E-15 106.9 20.1 325 1-347 20-382 (433)
148 PRK11652 emrD multidrug resist 99.3 1.2E-10 2.5E-15 108.5 18.0 150 225-375 26-187 (394)
149 PRK11646 multidrug resistance 99.3 1.4E-10 3E-15 107.9 18.4 151 222-374 25-188 (400)
150 TIGR00881 2A0104 phosphoglycer 99.3 6.3E-12 1.4E-16 116.2 9.3 152 223-375 11-175 (379)
151 PRK12307 putative sialic acid 99.3 1.1E-10 2.3E-15 109.9 17.8 146 211-357 22-179 (426)
152 PRK15402 multidrug efflux syst 99.3 1.1E-10 2.5E-15 108.9 17.5 152 223-375 29-192 (406)
153 TIGR00712 glpT glycerol-3-phos 99.3 3.6E-11 7.8E-16 113.4 14.2 147 226-374 46-209 (438)
154 PRK11273 glpT sn-glycerol-3-ph 99.3 9.7E-11 2.1E-15 110.9 16.3 148 226-375 48-212 (452)
155 PRK11102 bicyclomycin/multidru 99.3 8.8E-11 1.9E-15 108.6 15.5 150 225-375 9-170 (377)
156 PRK15462 dipeptide/tripeptide 99.3 1.4E-10 3.1E-15 108.5 16.7 149 217-366 19-184 (493)
157 TIGR00886 2A0108 nitrite extru 99.3 3.6E-10 7.8E-15 104.0 18.0 155 218-374 12-191 (366)
158 KOG1330|consensus 99.3 4.5E-12 9.7E-17 113.1 4.7 169 212-380 38-218 (493)
159 PRK03699 putative transporter; 99.3 3.8E-10 8.3E-15 104.9 17.9 160 207-367 7-179 (394)
160 PRK03893 putative sialic acid 99.2 2.5E-10 5.4E-15 109.7 16.8 145 211-356 24-180 (496)
161 PRK11043 putative transporter; 99.2 6.6E-10 1.4E-14 103.7 19.0 143 227-370 26-180 (401)
162 TIGR00897 2A0118 polyol permea 99.2 4.3E-10 9.3E-15 104.8 16.8 149 223-373 29-195 (402)
163 TIGR00924 yjdL_sub1_fam amino 99.2 3.2E-10 6.9E-15 107.6 16.1 154 212-366 15-187 (475)
164 PRK15034 nitrate/nitrite trans 99.2 1.6E-09 3.5E-14 100.4 19.6 168 206-374 33-235 (462)
165 TIGR00890 2A0111 Oxalate/Forma 99.2 1.2E-10 2.6E-15 107.5 11.8 149 223-373 19-179 (377)
166 TIGR00892 2A0113 monocarboxyla 99.2 5E-10 1.1E-14 105.9 15.9 147 224-372 36-195 (455)
167 TIGR00879 SP MFS transporter, 99.2 1.9E-10 4.2E-15 109.8 13.0 133 240-374 70-219 (481)
168 PRK10077 xylE D-xylose transpo 99.2 1.5E-09 3.3E-14 103.7 19.0 136 238-375 51-218 (479)
169 KOG2615|consensus 99.2 1.3E-10 2.8E-15 101.2 10.2 137 241-377 68-219 (451)
170 TIGR00899 2A0120 sugar efflux 99.2 7.2E-10 1.6E-14 102.4 16.0 152 223-375 13-180 (375)
171 PRK09556 uhpT sugar phosphate 99.2 1.5E-10 3.2E-15 110.1 11.6 151 223-373 45-214 (467)
172 PRK12382 putative transporter; 99.2 1.3E-09 2.8E-14 101.4 17.4 136 222-358 30-186 (392)
173 PRK10489 enterobactin exporter 99.2 1.2E-09 2.7E-14 102.4 17.2 150 223-374 33-199 (417)
174 KOG3098|consensus 99.2 3E-08 6.6E-13 90.9 25.4 107 9-128 53-161 (461)
175 PRK10207 dipeptide/tripeptide 99.2 7.6E-10 1.7E-14 105.1 15.6 141 217-358 24-181 (489)
176 TIGR00894 2A0114euk Na(+)-depe 99.2 1.6E-10 3.5E-15 110.0 10.9 136 238-374 72-222 (465)
177 TIGR00887 2A0109 phosphate:H+ 99.2 2.7E-09 5.8E-14 102.5 19.2 133 241-375 56-228 (502)
178 PRK05122 major facilitator sup 99.2 1.4E-09 3E-14 101.4 16.6 140 222-362 30-190 (399)
179 cd06174 MFS The Major Facilita 99.2 9.8E-10 2.1E-14 100.3 15.2 145 222-367 14-170 (352)
180 TIGR00880 2_A_01_02 Multidrug 99.1 9.2E-10 2E-14 86.0 12.4 124 249-373 6-140 (141)
181 PRK11195 lysophospholipid tran 99.1 3.7E-09 8E-14 98.1 17.9 146 226-374 22-176 (393)
182 PRK09705 cynX putative cyanate 99.1 3.1E-09 6.7E-14 98.7 16.4 140 223-363 25-176 (393)
183 PRK03633 putative MFS family t 99.1 4E-09 8.7E-14 97.6 17.1 133 214-346 13-157 (381)
184 TIGR00889 2A0110 nucleoside tr 99.1 9E-10 2E-14 103.0 12.6 126 6-144 251-394 (418)
185 PRK09528 lacY galactoside perm 99.1 4.4E-10 9.6E-15 105.5 9.7 126 6-144 262-395 (420)
186 PF01770 Folate_carrier: Reduc 99.1 3.4E-08 7.4E-13 89.1 20.8 310 11-336 46-393 (412)
187 PRK09584 tppB putative tripept 99.1 5.6E-09 1.2E-13 99.7 16.9 148 215-363 29-193 (500)
188 TIGR00885 fucP L-fucose:H+ sym 99.1 7.9E-09 1.7E-13 96.3 16.8 142 224-367 20-203 (410)
189 TIGR01301 GPH_sucrose GPH fami 99.0 1.8E-08 3.8E-13 94.2 17.7 170 206-376 4-223 (477)
190 PRK15011 sugar efflux transpor 99.0 1.4E-08 3E-13 94.4 17.2 152 222-375 30-198 (393)
191 COG2223 NarK Nitrate/nitrite t 99.0 4.7E-09 1E-13 93.2 12.8 164 208-373 15-195 (417)
192 PRK10406 alpha-ketoglutarate t 99.0 2E-08 4.3E-13 94.6 17.8 147 216-363 31-211 (432)
193 TIGR00898 2A0119 cation transp 99.0 7.7E-09 1.7E-13 99.6 15.0 142 229-375 111-267 (505)
194 KOG0569|consensus 99.0 1.4E-08 3.1E-13 93.9 15.7 132 244-376 63-209 (485)
195 PF05631 DUF791: Protein of un 99.0 9.2E-09 2E-13 90.2 13.3 226 2-267 65-304 (354)
196 TIGR00806 rfc RFC reduced fola 99.0 5.1E-08 1.1E-12 89.3 18.1 164 206-374 27-205 (511)
197 PF05977 MFS_3: Transmembrane 99.0 2.5E-08 5.4E-13 94.8 16.8 137 230-367 33-186 (524)
198 TIGR00901 2A0125 AmpG-related 99.0 2.4E-08 5.2E-13 91.6 15.8 149 225-375 6-182 (356)
199 PTZ00207 hypothetical protein; 99.0 5.7E-08 1.2E-12 92.9 18.6 148 222-374 42-208 (591)
200 PRK15075 citrate-proton sympor 99.0 2.5E-08 5.5E-13 94.0 16.1 148 208-356 16-197 (434)
201 KOG3764|consensus 99.0 1.3E-09 2.8E-14 95.6 6.7 137 240-377 105-253 (464)
202 TIGR00882 2A0105 oligosacchari 99.0 1.6E-08 3.4E-13 94.3 14.4 154 216-373 11-185 (396)
203 PRK11902 ampG muropeptide tran 99.0 3.4E-08 7.4E-13 92.1 16.5 155 217-375 9-185 (402)
204 TIGR00902 2A0127 phenyl propri 98.9 3.3E-08 7.3E-13 91.5 15.7 135 222-359 19-167 (382)
205 PRK11010 ampG muropeptide tran 98.9 5.8E-08 1.2E-12 92.7 17.4 150 222-375 27-198 (491)
206 PRK09952 shikimate transporter 98.9 7.6E-08 1.6E-12 90.8 17.9 112 250-362 73-211 (438)
207 PF06609 TRI12: Fungal trichot 98.9 3.6E-08 7.7E-13 93.7 15.5 142 228-371 65-217 (599)
208 PRK10133 L-fucose transporter; 98.9 9.7E-08 2.1E-12 89.8 17.9 121 223-343 42-177 (438)
209 PRK06814 acylglycerophosphoeth 98.9 4.3E-08 9.4E-13 103.8 17.2 131 242-374 53-197 (1140)
210 PRK11128 putative 3-phenylprop 98.9 3.6E-08 7.8E-13 91.3 14.4 147 223-373 20-180 (382)
211 PF06963 FPN1: Ferroportin1 (F 98.9 7.2E-07 1.6E-11 82.1 22.5 317 17-338 50-411 (432)
212 TIGR00883 2A0106 metabolite-pr 98.9 1.3E-08 2.9E-13 94.5 11.5 128 2-142 251-391 (394)
213 KOG0255|consensus 98.9 4.2E-08 9.1E-13 94.8 14.0 131 240-375 117-258 (521)
214 PRK08633 2-acyl-glycerophospho 98.9 7.1E-08 1.5E-12 102.4 16.7 103 243-345 49-165 (1146)
215 TIGR00896 CynX cyanate transpo 98.9 6.5E-08 1.4E-12 88.7 14.4 137 224-361 17-165 (355)
216 TIGR00805 oat sodium-independe 98.8 1.9E-08 4.1E-13 98.5 10.4 150 224-374 50-283 (633)
217 TIGR02718 sider_RhtX_FptX side 98.8 3.6E-07 7.9E-12 84.9 17.4 161 212-373 6-186 (390)
218 KOG2532|consensus 98.7 1.1E-07 2.4E-12 88.8 11.4 134 240-374 72-219 (466)
219 KOG2533|consensus 98.7 1.2E-07 2.5E-12 89.0 11.0 140 236-376 75-232 (495)
220 PF11700 ATG22: Vacuole efflux 98.7 2.1E-07 4.6E-12 87.6 11.9 131 1-144 312-460 (477)
221 TIGR00792 gph sugar (Glycoside 98.6 7.1E-07 1.5E-11 84.4 14.0 108 8-128 259-377 (437)
222 PF06813 Nodulin-like: Nodulin 98.6 8.7E-07 1.9E-11 75.2 12.5 154 215-372 10-182 (250)
223 COG2270 Permeases of the major 98.6 3.5E-07 7.6E-12 81.6 10.5 131 1-144 283-421 (438)
224 KOG2504|consensus 98.6 6.4E-07 1.4E-11 84.9 12.6 149 223-373 62-223 (509)
225 PF01306 LacY_symp: LacY proto 98.5 6.3E-07 1.4E-11 81.5 10.8 146 223-372 23-189 (412)
226 KOG0254|consensus 98.5 1.6E-06 3.6E-11 83.4 14.2 129 244-375 92-233 (513)
227 PF00083 Sugar_tr: Sugar (and 98.5 2E-09 4.2E-14 102.2 -7.4 131 243-375 48-195 (451)
228 PRK09669 putative symporter Ya 98.5 1.6E-06 3.5E-11 82.0 12.3 150 224-374 26-207 (444)
229 PRK09848 glucuronide transport 98.5 2.7E-06 6E-11 80.6 13.6 101 15-128 273-385 (448)
230 PF06813 Nodulin-like: Nodulin 98.4 1.7E-05 3.7E-10 67.5 16.1 122 1-128 32-154 (250)
231 KOG0637|consensus 98.4 3E-07 6.6E-12 82.6 5.8 113 19-132 80-206 (498)
232 COG3104 PTR2 Dipeptide/tripept 98.4 1.1E-06 2.3E-11 80.4 9.2 152 218-370 32-205 (498)
233 KOG2816|consensus 98.4 6.1E-06 1.3E-10 77.0 14.3 127 251-380 72-208 (463)
234 KOG0253|consensus 98.4 3E-06 6.6E-11 74.1 10.4 136 238-376 109-255 (528)
235 PRK11462 putative transporter; 98.4 1.8E-05 3.9E-10 75.1 16.2 151 223-374 25-207 (460)
236 PRK10429 melibiose:sodium symp 98.4 9.8E-06 2.1E-10 77.3 14.5 151 223-374 22-204 (473)
237 TIGR01272 gluP glucose/galacto 98.4 4.8E-06 1E-10 74.5 11.5 123 2-139 174-302 (310)
238 PF13347 MFS_2: MFS/sugar tran 98.3 2.2E-06 4.7E-11 80.7 9.3 148 225-373 19-200 (428)
239 KOG3762|consensus 98.3 2.2E-06 4.8E-11 78.6 8.5 144 223-367 387-543 (618)
240 KOG4686|consensus 98.3 2.2E-06 4.7E-11 72.2 7.5 115 1-128 295-411 (459)
241 TIGR00926 2A1704 Peptide:H+ sy 98.3 0.00025 5.4E-09 69.5 22.9 138 3-144 20-174 (654)
242 COG0738 FucP Fucose permease [ 98.3 2.5E-05 5.4E-10 69.6 14.3 141 227-367 33-206 (422)
243 PF05978 UNC-93: Ion channel r 98.3 2E-05 4.3E-10 61.8 11.8 106 9-127 40-147 (156)
244 TIGR00769 AAA ADP/ATP carrier 98.3 0.0025 5.4E-08 59.8 27.7 121 7-128 44-188 (472)
245 COG0477 ProP Permeases of the 98.3 9.8E-06 2.1E-10 72.3 11.8 124 7-143 40-176 (338)
246 PF05631 DUF791: Protein of un 98.2 0.00012 2.6E-09 64.8 16.7 145 233-377 60-222 (354)
247 PF02487 CLN3: CLN3 protein; 98.2 2.8E-05 6.1E-10 70.5 12.8 109 16-142 69-185 (402)
248 KOG2325|consensus 98.2 1.1E-05 2.5E-10 74.5 9.7 170 208-377 35-235 (488)
249 PF03825 Nuc_H_symport: Nucleo 98.2 2.2E-05 4.8E-10 72.5 11.5 124 8-144 245-387 (400)
250 COG2807 CynX Cyanate permease 98.1 0.00019 4.2E-09 63.2 16.0 146 222-368 27-183 (395)
251 TIGR00788 fbt folate/biopterin 98.1 7.7E-05 1.7E-09 70.9 14.8 161 210-375 29-212 (468)
252 KOG0252|consensus 98.0 5.3E-05 1.2E-09 68.6 10.4 94 240-333 83-194 (538)
253 COG2211 MelB Na+/melibiose sym 98.0 0.00017 3.7E-09 66.7 13.8 153 223-376 28-212 (467)
254 PF03209 PUCC: PUCC protein; 97.9 0.00024 5.2E-09 63.9 13.0 131 1-144 239-390 (403)
255 KOG3810|consensus 97.9 0.00034 7.4E-09 61.0 12.8 321 18-368 54-418 (433)
256 KOG3574|consensus 97.8 0.002 4.3E-08 57.2 15.7 97 26-125 89-189 (510)
257 PF13000 Acatn: Acetyl-coenzym 97.7 0.0043 9.3E-08 57.4 17.9 111 17-128 51-177 (544)
258 KOG4332|consensus 97.7 0.00063 1.4E-08 57.3 11.1 75 11-98 77-154 (454)
259 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00016 3.6E-09 49.2 6.5 59 219-277 12-71 (77)
260 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.002 4.3E-08 63.4 15.2 144 225-368 5-179 (654)
261 KOG3762|consensus 97.6 9.5E-05 2.1E-09 68.3 5.6 118 14-144 414-539 (618)
262 PF01770 Folate_carrier: Reduc 97.4 0.0088 1.9E-07 54.7 15.2 166 206-375 5-185 (412)
263 PF03219 TLC: TLC ATP/ADP tran 97.4 0.06 1.3E-06 51.1 21.2 109 20-128 73-203 (491)
264 PF03137 OATP: Organic Anion T 97.3 3.5E-05 7.5E-10 73.9 -1.4 140 231-370 27-249 (539)
265 PF05978 UNC-93: Ion channel r 97.2 0.023 4.9E-07 44.7 14.0 101 242-342 38-148 (156)
266 PF03092 BT1: BT1 family; Int 97.0 0.014 3E-07 55.0 12.9 136 236-374 19-178 (433)
267 TIGR00769 AAA ADP/ATP carrier 97.0 0.11 2.3E-06 49.1 18.3 102 243-344 45-190 (472)
268 KOG2563|consensus 96.9 0.019 4.2E-07 52.5 12.4 106 241-346 79-203 (480)
269 TIGR00939 2a57 Equilibrative N 96.7 0.26 5.6E-06 46.3 18.8 38 301-338 390-427 (437)
270 PF07672 MFS_Mycoplasma: Mycop 96.7 0.0038 8.1E-08 52.7 5.5 44 101-144 2-54 (267)
271 PF12832 MFS_1_like: MFS_1 lik 96.7 0.0068 1.5E-07 41.2 5.7 44 2-45 31-75 (77)
272 PF00854 PTR2: POT family; In 96.6 0.0056 1.2E-07 56.5 7.0 96 36-144 2-115 (372)
273 PF03219 TLC: TLC ATP/ADP tran 96.4 0.29 6.2E-06 46.6 17.0 42 303-344 164-205 (491)
274 PF06779 DUF1228: Protein of u 96.3 0.029 6.3E-07 38.7 7.1 54 2-55 23-77 (85)
275 KOG3626|consensus 96.3 0.017 3.6E-07 56.6 8.0 138 238-376 128-347 (735)
276 KOG0637|consensus 96.3 0.0022 4.8E-08 58.4 2.0 134 206-340 32-200 (498)
277 PF06963 FPN1: Ferroportin1 (F 96.0 0.38 8.3E-06 44.9 15.2 144 226-371 21-200 (432)
278 COG0477 ProP Permeases of the 95.8 0.68 1.5E-05 40.7 16.0 120 226-345 21-158 (338)
279 COG3202 ATP/ADP translocase [E 95.6 2 4.3E-05 40.3 23.9 111 18-128 74-207 (509)
280 PRK03612 spermidine synthase; 94.7 0.59 1.3E-05 45.1 12.4 122 1-128 45-168 (521)
281 KOG1237|consensus 94.7 3.6 7.8E-05 40.2 17.5 133 11-144 78-237 (571)
282 COG3202 ATP/ADP translocase [E 94.6 4 8.7E-05 38.4 17.0 44 302-345 167-210 (509)
283 KOG3098|consensus 94.2 1.3 2.8E-05 41.6 12.8 111 16-128 289-411 (461)
284 PRK03612 spermidine synthase; 92.9 7.6 0.00017 37.6 16.3 49 317-366 143-192 (521)
285 PF06779 DUF1228: Protein of u 92.7 0.44 9.5E-06 32.9 5.5 56 224-279 9-65 (85)
286 PF00854 PTR2: POT family; In 92.2 1.1 2.3E-05 41.4 9.4 74 294-368 44-120 (372)
287 PF02487 CLN3: CLN3 protein; 92.1 0.67 1.5E-05 42.6 7.5 55 73-128 340-394 (402)
288 KOG2601|consensus 92.1 0.43 9.4E-06 42.8 6.0 37 19-55 77-113 (503)
289 KOG3097|consensus 90.8 12 0.00025 33.5 13.9 96 16-124 68-180 (390)
290 KOG4332|consensus 89.1 0.89 1.9E-05 39.0 5.1 38 238-275 68-106 (454)
291 PF01733 Nucleoside_tran: Nucl 89.1 0.14 3.1E-06 45.8 0.6 93 245-338 186-303 (309)
292 KOG1479|consensus 88.7 15 0.00032 34.0 12.9 18 220-237 31-48 (406)
293 TIGR00939 2a57 Equilibrative N 88.5 8.3 0.00018 36.4 11.8 13 305-318 128-140 (437)
294 KOG1237|consensus 86.6 16 0.00035 35.9 12.7 143 223-366 53-240 (571)
295 COG5336 Uncharacterized protei 83.3 4 8.6E-05 29.2 5.1 33 16-48 53-86 (116)
296 KOG3574|consensus 81.0 20 0.00043 32.9 9.7 34 306-339 156-189 (510)
297 KOG1479|consensus 80.1 51 0.0011 30.6 15.9 35 301-335 361-395 (406)
298 PF13000 Acatn: Acetyl-coenzym 76.4 5.5 0.00012 37.7 5.2 33 307-339 142-174 (544)
299 COG5336 Uncharacterized protei 75.1 5.1 0.00011 28.7 3.6 53 314-366 37-90 (116)
300 PF11947 DUF3464: Protein of u 68.0 56 0.0012 25.6 8.2 90 26-122 55-147 (153)
301 PF03547 Mem_trans: Membrane t 67.4 21 0.00046 33.0 7.1 12 327-338 103-114 (385)
302 PF09527 ATPase_gene1: Putativ 64.6 31 0.00068 21.4 6.7 37 11-47 5-43 (55)
303 TIGR02230 ATPase_gene1 F0F1-AT 62.6 52 0.0011 23.6 6.6 37 11-47 47-85 (100)
304 KOG3880|consensus 61.3 6.6 0.00014 34.7 2.3 65 21-101 77-146 (409)
305 PF07672 MFS_Mycoplasma: Mycop 57.2 93 0.002 27.0 8.3 28 12-39 147-176 (267)
306 KOG3880|consensus 56.0 38 0.00082 30.2 5.9 58 70-128 344-401 (409)
307 KOG2601|consensus 55.7 1.7E+02 0.0038 27.1 10.9 45 318-363 174-218 (503)
308 COG1422 Predicted membrane pro 52.7 1.3E+02 0.0028 24.7 9.1 25 116-141 33-57 (201)
309 PF07857 DUF1632: CEO family ( 51.6 45 0.00099 28.7 5.8 21 315-335 75-95 (254)
310 KOG2881|consensus 47.7 1.8E+02 0.004 25.0 9.4 27 252-278 251-277 (294)
311 COG1268 BioY Uncharacterized c 46.6 81 0.0018 25.6 6.1 22 13-34 89-111 (184)
312 KOG4112|consensus 42.0 61 0.0013 22.6 4.0 42 323-368 27-68 (101)
313 PRK10692 hypothetical protein; 41.5 76 0.0017 21.8 4.3 22 34-55 3-24 (92)
314 PF01733 Nucleoside_tran: Nucl 40.2 11 0.00023 33.8 0.3 57 69-126 249-305 (309)
315 PF02632 BioY: BioY family; I 39.6 1.3E+02 0.0028 23.5 6.2 38 14-51 61-99 (148)
316 KOG0055|consensus 38.9 4.3E+02 0.0094 28.8 11.3 18 127-144 805-822 (1228)
317 PF11947 DUF3464: Protein of u 38.8 51 0.0011 25.8 3.7 42 293-334 104-145 (153)
318 PF04281 Tom22: Mitochondrial 34.4 1E+02 0.0023 23.6 4.7 27 307-333 59-85 (137)
319 COG4769 Predicted membrane pro 34.3 1.6E+02 0.0034 23.4 5.6 30 14-43 82-111 (181)
320 PF10762 DUF2583: Protein of u 33.4 1E+02 0.0022 21.1 4.0 22 34-55 3-24 (89)
321 PF06645 SPC12: Microsomal sig 32.1 87 0.0019 21.2 3.6 32 333-367 21-52 (76)
322 KOG3810|consensus 27.8 2.1E+02 0.0046 26.3 6.2 43 303-345 114-156 (433)
323 PF11283 DUF3084: Protein of u 26.2 1.6E+02 0.0035 19.9 4.0 32 10-41 5-36 (79)
324 PF02990 EMP70: Endomembrane p 26.1 6.3E+02 0.014 24.7 11.9 26 246-271 302-327 (521)
325 PF04281 Tom22: Mitochondrial 25.4 1.3E+02 0.0028 23.1 3.9 29 93-121 59-87 (137)
326 PF05545 FixQ: Cbb3-type cytoc 24.0 89 0.0019 18.8 2.4 9 365-373 25-33 (49)
327 PRK14397 membrane protein; Pro 23.3 2.5E+02 0.0053 23.7 5.5 6 381-386 179-184 (222)
328 TIGR00986 3a0801s05tom22 mitoc 23.2 2E+02 0.0043 22.2 4.5 25 307-331 57-81 (145)
329 PHA03231 glycoprotein BALF4; P 23.2 68 0.0015 32.8 2.6 23 321-343 676-698 (829)
330 COG3105 Uncharacterized protei 22.8 1.9E+02 0.0042 21.7 4.2 8 26-33 22-29 (138)
331 PF13493 DUF4118: Domain of un 22.7 1.3E+02 0.0029 21.4 3.6 22 14-35 83-105 (105)
332 KOG3097|consensus 22.6 4.9E+02 0.011 23.8 7.4 30 251-280 68-97 (390)
333 COG4736 CcoQ Cbb3-type cytochr 22.2 1E+02 0.0023 19.7 2.4 10 367-376 27-36 (60)
334 PF01528 Herpes_glycop: Herpes 21.4 2.1E+02 0.0045 26.4 5.1 11 302-312 253-263 (374)
335 PF02447 GntP_permease: GntP f 21.3 7.2E+02 0.016 23.7 10.3 36 238-273 53-97 (441)
336 PF08551 DUF1751: Eukaryotic i 20.8 3.3E+02 0.007 19.5 6.5 40 16-55 24-65 (99)
337 PF10066 DUF2304: Uncharacteri 20.5 1.9E+02 0.0042 21.3 4.0 25 323-347 37-61 (115)
338 COG5547 Small integral membran 20.1 2.4E+02 0.0053 17.7 4.2 21 35-55 8-28 (62)
No 1
>KOG0569|consensus
Probab=100.00 E-value=2.1e-40 Score=301.52 Aligned_cols=367 Identities=25% Similarity=0.383 Sum_probs=318.5
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHHHHHH
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILFYVAI 80 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~l~G~ 80 (420)
.+...++++.+|.++|++. |.++||+|||..+.++.++..++.+++.++ +.+++++| ++.|+
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR------------~i~Gl 128 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGR------------LIVGL 128 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH------------HHHHH
Confidence 3778899999999999999 999999999999999999999999988887 89999999 99999
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh------hhHHHHHhHhhhcccc---------c
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL------HWRTVAWLSLAYILIP---------S 145 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~------~wr~~f~~~~~~~~~~---------~ 145 (420)
..| ......+.|+.|..|++.||....+.+.+..+|..++..++..- .|++.+.+..+++++. +
T Consensus 129 ~~g-l~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PES 207 (485)
T KOG0569|consen 129 ACG-LSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPES 207 (485)
T ss_pred HhH-HHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999 88888999999999999999999999999999999997666443 6999998888876655 9
Q ss_pred cceeee-cCcHHHHHHHHHHHhcchhhhhhhHHHHhh-hccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcch
Q psy6665 146 PVWLLN-KGRANQALKSLKYLARNYKEVKNKEQELKK-MNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGI 223 (420)
Q Consensus 146 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (420)
|+|++. +++.+|+++.++.+++.+++.+..+++.+. ++.+.+++++.+..+.++ ++..|++..+.+.+....++++.
T Consensus 208 Pk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~-~~~lR~~~~i~~~v~~~qq~sGi 286 (485)
T KOG0569|consen 208 PKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLK-NPTLRRPLLIGIVVSFAQQFSGI 286 (485)
T ss_pred cchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhc-CcchhHHHHHHHHHHHHHHhcCc
Confidence 999998 889999999999999876544443332211 222222235667888887 88899999999999999999999
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------------h-hHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------------K-SLI 284 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------------~-~~~ 284 (420)
+...+|...++++.|+ ..++.......++...+.++++.++.||+|||++++.+..+ . .|.
T Consensus 287 ~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~ 366 (485)
T KOG0569|consen 287 NAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWL 366 (485)
T ss_pred ceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 9999999999999999 88888999999999999999999999999999998888776 1 122
Q ss_pred ---HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHH
Q psy6665 285 ---PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISV 361 (420)
Q Consensus 285 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 361 (420)
.+...+.+...+..|.+|+.+-+.+|++|++.|..+.++.....++..++....++.+.+..| ...|.++.+.++
T Consensus 367 ~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g--~~~filF~i~~~ 444 (485)
T KOG0569|consen 367 SYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG--PYVFILFVIPLA 444 (485)
T ss_pred HHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--chhhHHHHHHHH
Confidence 345566677778889999999999999999999999999999999999999999999999999 488899999999
Q ss_pred HHHHHhhhccccCCCCChHHHHHHhccc
Q psy6665 362 ISIVYVYIFLPETHGRTLLEIEEYFETS 389 (420)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (420)
+..+..++.+||||+|+..|+.+..++.
T Consensus 445 ~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 445 IFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 9999999999999999999887776544
No 2
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=3.9e-34 Score=272.87 Aligned_cols=364 Identities=20% Similarity=0.366 Sum_probs=248.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--------------HHHHHhhcccc
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--------------TQLIMTGQIEK 66 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------~~~~~~~r~~~ 66 (420)
+.+.....+..+++.++.++++++ |+++||+|||++++++.+++.++.+.+++. ++.+++.|
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R--- 127 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYR--- 127 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHH---
Confidence 455667788999999999999999 999999999999999999999988877752 45678999
Q ss_pred ccchhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh------------hhhHHHH
Q psy6665 67 SLIPVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV------------LHWRTVA 134 (420)
Q Consensus 67 ~~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~------------~~wr~~f 134 (420)
+++|++.| ...+...++++|++|+++|++++++.+.+..+|..+++.++.. .+||++|
T Consensus 128 ---------~l~G~~~g-~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f 197 (479)
T PRK10077 128 ---------IIGGIGVG-LASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMF 197 (479)
T ss_pred ---------HHHhhhHh-HHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHH
Confidence 99999999 7777799999999999999999999999999999988776542 3799999
Q ss_pred HhHhhhccccccceeeecC---------cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhh-hhhhHHHHHhhcccc
Q psy6665 135 WLSLAYILIPSPVWLLNKG---------RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQ-SLSARLIKMVTMATG 204 (420)
Q Consensus 135 ~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 204 (420)
++.+++.++.....+..++ +.+++++...+..+.+.... .. ++.++..+ ++......+ ...
T Consensus 198 ~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~---~~~ 268 (479)
T PRK10077 198 ASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQ----AL--QEIKHSLDHGRKTGGKLL---MFG 268 (479)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHH----HH--HHHHHHHHHhhhhhhhhc---chh
Confidence 9877666554111111222 22222221221111110000 00 00000000 000000000 000
Q ss_pred chHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---
Q psy6665 205 IKPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--- 280 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--- 280 (420)
............+.+..+.+...++.|.+.++.|. ...........++..+++.++.++++||+|||+.+..+..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v 348 (479)
T PRK10077 269 VGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAI 348 (479)
T ss_pred HHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHH
Confidence 11112222223334444556677888998888787 55566666778888999999999999999999988776655
Q ss_pred ----------hh---HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHH----
Q psy6665 281 ----------KS---LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFK---- 343 (420)
Q Consensus 281 ----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~---- 343 (420)
.+ ......+.++..++..++.|..+.++.|.+|++.|+++.|+.+...+++.++++.+.+.+.
T Consensus 349 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~ 428 (479)
T PRK10077 349 GMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSW 428 (479)
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Confidence 00 0111122223333333445777899999999999999999999999999999987776554
Q ss_pred --HhcCcchHHHHHHHHHHHHHHHHhhhccccCCCCChHHHHHHhcc
Q psy6665 344 --DSVGGSAMVQWFFALISVISIVYVYIFLPETHGRTLLEIEEYFET 388 (420)
Q Consensus 344 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (420)
+..+ +...+++++++++++.++.+++.||+++++.+|.++..++
T Consensus 429 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 474 (479)
T PRK10077 429 LVAHFH-NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEP 474 (479)
T ss_pred hhhhcc-CccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhh
Confidence 4666 6777888888888888777778899999888877665543
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=4.8e-34 Score=276.56 Aligned_cols=358 Identities=15% Similarity=0.163 Sum_probs=262.2
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+.+.....+..+++.+|.++++++ |+++||+|||++++++.++.+++.++++++ ++.++++| ++.
T Consensus 198 gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R------------~l~ 265 (742)
T TIGR01299 198 CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCR------------LLS 265 (742)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH------------HHH
Confidence 456667778889999999999999 999999999999999999999999999888 89999999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----------------hhHHHHHhHhhhc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----------------HWRTVAWLSLAYI 141 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------------~wr~~f~~~~~~~ 141 (420)
|++.+ ...+...+++.|++|+++|++.+++...++.+|.++++.++..+ +||+.+++.+++.
T Consensus 266 G~g~g-~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 266 GFGIG-GAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 99999 66677999999999999999999999999999999888755332 5999988877666
Q ss_pred ccc---------ccceeeecCcHHHHHHHHHHHhcchhhh---hhhH---HHHhhhcc-------chhh---------hh
Q psy6665 142 LIP---------SPVWLLNKGRANQALKSLKYLARNYKEV---KNKE---QELKKMNS-------TKEN---------QS 190 (420)
Q Consensus 142 ~~~---------~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~-------~~~~---------~~ 190 (420)
++. +|+|+..+++.+++.+.++++++.+... +... ++.+.... ++.. +.
T Consensus 345 ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (742)
T TIGR01299 345 VFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRA 424 (742)
T ss_pred HHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhh
Confidence 544 8999999999999988888886543211 0000 00000000 0000 00
Q ss_pred h-------hhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh--------------------------
Q psy6665 191 L-------SARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-------------------------- 237 (420)
Q Consensus 191 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 237 (420)
+ .+++++ +++.++++.++....+++..+ +++.+..|+|.++.+.
T Consensus 425 ~~~~~~~~~~~~~l--f~~~~~~~tl~l~~~wf~~~~-~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (742)
T TIGR01299 425 LSEGGGIWGNFLRC--FNPEVREITIKLMGVWFTLSF-GYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTL 501 (742)
T ss_pred hhhhhhHHHHHHHH--cCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccch
Confidence 0 012222 355566666666666555444 6888999999875431
Q ss_pred ----------------CC-----c--------------------------------------------------------
Q psy6665 238 ----------------GS-----R-------------------------------------------------------- 240 (420)
Q Consensus 238 ----------------g~-----~-------------------------------------------------------- 240 (420)
|+ .
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (742)
T TIGR01299 502 ENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKE 581 (742)
T ss_pred hhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCC
Confidence 00 0
Q ss_pred -------------chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHH
Q psy6665 241 -------------MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAIS 296 (420)
Q Consensus 241 -------------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 296 (420)
...+....+..++.+++.++.++++||+|||+++..+.++ .+...++...++..++
T Consensus 582 ~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~ 661 (742)
T TIGR01299 582 GCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGL 661 (742)
T ss_pred ccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 0113335566788999999999999999999998777665 1112222222233333
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
..+..+..+++++|++|++.|++++|+.+...++|++++|++.+.+.+. + ...++++.+++.++++++.+ ++||+++
T Consensus 662 ~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~-~~~pf~i~a~~lll~~ll~~-~LPET~~ 738 (742)
T TIGR01299 662 SIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T-KAAPILFASAALACGGLLAL-KLPDTRG 738 (742)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 3445667779999999999999999999999999999999999988775 3 46778777777777666654 5699887
Q ss_pred CC
Q psy6665 377 RT 378 (420)
Q Consensus 377 ~~ 378 (420)
+.
T Consensus 739 ~~ 740 (742)
T TIGR01299 739 QV 740 (742)
T ss_pred cc
Confidence 64
No 4
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.8e-34 Score=275.59 Aligned_cols=357 Identities=15% Similarity=0.160 Sum_probs=247.9
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--------HHHHHhhccccccchhHHHHHH
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--------TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+.....+.+.++.+++.++ |+++||+|||+++..+.+++.++.++++++ ++.+++.| ++
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r------------~l 124 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWR------------FW 124 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHH------------HH
Confidence 4467888899999999999 999999999999999999999999888775 35789999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh---------------------------hhh
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV---------------------------LHW 130 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~---------------------------~~w 130 (420)
+|++.+ ...+....++.|++|+++|++++++.+....+|..+++.++.. .+|
T Consensus 125 ~G~~~g-~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 203 (502)
T TIGR00887 125 LGVGIG-GDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW 203 (502)
T ss_pred HHHHHh-hhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH
Confidence 999999 7777799999999999999999999999999998888876532 169
Q ss_pred HHHHHhHhhhcccc---------ccceeeecCcHH-HHHHHHHHHhcchhhhhhhHHHHhhhccchh-hhhhhhHHHHHh
Q psy6665 131 RTVAWLSLAYILIP---------SPVWLLNKGRAN-QALKSLKYLARNYKEVKNKEQELKKMNSTKE-NQSLSARLIKMV 199 (420)
Q Consensus 131 r~~f~~~~~~~~~~---------~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 199 (420)
|+++.+.++++++. +|+|+..+++.+ ++.+.+.+..+.+.+.+. ++. ++.+++ ++.+.+++++++
T Consensus 204 R~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~l~~ 279 (502)
T TIGR00887 204 RILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEP--DEV--EKASTAVEVPKASWSDFFT 279 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCc--ccc--cchhccccchhhhHHHHHH
Confidence 99998887766544 888988777654 344444444332111110 011 111111 111234666654
Q ss_pred h--ccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHH------------HHHHHHHHHHHHHHHHHHHh
Q psy6665 200 T--MATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVY------------LATVLVGVVRMVFGLLTSQL 264 (420)
Q Consensus 200 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~------------~~~~~~~~~~~~~~~~~g~l 264 (420)
. .++.++ ..+......+.....++....|.|.++++.|+ ..+.. .......++.+++.++.+++
T Consensus 280 ~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l 358 (502)
T TIGR00887 280 HFFKWRHGK-HLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFL 358 (502)
T ss_pred HHhhhHHHH-HHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111212 22222222222222345667778998887777 32211 12333445667788999999
Q ss_pred hhccCchhhHhhhccc-----------h-h--HHHHHH-HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHH
Q psy6665 265 LRTYGRRSLTMFSQIE-----------K-S--LIPVFC-ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAH 329 (420)
Q Consensus 265 ~d~~g~~~~~~~~~~~-----------~-~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 329 (420)
+||+|||++++.+..+ . . ...... ..+...++..+..+..+.+..|++|++.|+++.|+.+...+
T Consensus 359 ~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~ 438 (502)
T TIGR00887 359 VDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGK 438 (502)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhh
Confidence 9999999987766544 0 0 011111 11122223445567778889999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHhc----------CcchHHHHHHHHHHHHHHHHhhhccccCCCCChHHHH
Q psy6665 330 ILMFFALQYYPWFKDSV----------GGSAMVQWFFALISVISIVYVYIFLPETHGRTLLEIE 383 (420)
Q Consensus 330 ~~~~~~~~~~g~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (420)
++++++|.+.+.+.+.. + ....+.+++++++++.+.. +++||+++++.||++
T Consensus 439 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 439 AGAIIGQFGFLYLAQHGDPTKGYPTGIW-MGHVLEIFALFMFLGILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred hHHHHHHHHhhhhhcccccccccccccc-chHHHHHHHHHHHHHHHHh-eEeccCCCCCHHhhh
Confidence 99999999999988843 3 3567788888887776654 677999998877654
No 5
>KOG0254|consensus
Probab=100.00 E-value=3e-33 Score=267.10 Aligned_cols=367 Identities=25% Similarity=0.423 Sum_probs=299.2
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhh
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~ 83 (420)
...+..+...+|..+++++ |+++|++|||+.++++.+++.++.++++++ +++++++| +++|+|.|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR------------~l~G~g~G 157 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGR------------ILTGLGVG 157 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH------------HHhccchh
Confidence 3468889999999999999 999999999999999999999999999999 99999999 99999999
Q ss_pred cccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcccc---------cccee
Q psy6665 84 AMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIP---------SPVWL 149 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~---------~~~~l 149 (420)
......+.|++|+.|++.||...+..+....+|..++..++... +||..+.+..+++++. +|+|+
T Consensus 158 -~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L 236 (513)
T KOG0254|consen 158 -GASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWL 236 (513)
T ss_pred -hhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 66677999999999999999999999999999999998887777 6999888877776655 99999
Q ss_pred eecCcHHHHHHHHHHHhcch-hhhhhhHHHHhhhccchh--hhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhH
Q psy6665 150 LNKGRANQALKSLKYLARNY-KEVKNKEQELKKMNSTKE--NQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYIT 226 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
..+++.++++..+.++++.. .+.+...++...+...+. .+.+..+.+++ .+..+++..+.+.+..++++++.+..
T Consensus 237 ~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~i~~~l~~fqq~tG~~~~ 314 (513)
T KOG0254|consen 237 IEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELF--SPKVRKRLIIGLLLQLFQQLTGINYV 314 (513)
T ss_pred HHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhc--CcchHHHHHHHHHHHHHHHHhCCceE
Confidence 99999999999999988832 222222112110111111 01111233443 35677888889999999999999999
Q ss_pred HHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------------------hh
Q psy6665 227 IFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------------------KS 282 (420)
Q Consensus 227 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------------------~~ 282 (420)
.+|.+.+++..|...+........++..+++.+++.++.||+|||+.++.+... ..
T Consensus 315 ~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 315 FYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred EeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 999999999988843336777778889999999999999999999998877666 12
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHH
Q psy6665 283 LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVI 362 (420)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 362 (420)
+..+...+++...+..+..++.|.+.+|.+|.+.|+.+.++.....++.+.+.......+.+..+ ....+..++.++.+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~ 473 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLL 473 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHH
Confidence 44566677778888889999999999999999999999999999999999887777777666644 35677777777777
Q ss_pred HHH-HhhhccccCCCCChHHHHHHhccc
Q psy6665 363 SIV-YVYIFLPETHGRTLLEIEEYFETS 389 (420)
Q Consensus 363 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 389 (420)
... .+++++||+++++.+|+++.+++.
T Consensus 474 ~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 474 SLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred HHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 777 788899999999999988876554
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=8.8e-33 Score=262.93 Aligned_cols=335 Identities=15% Similarity=0.176 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HH--------HHHhhccccccchhHHHHHHHHH
Q psy6665 12 VLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQ--------LIMTGQIEKSLIPVFCILFYVAI 80 (420)
Q Consensus 12 ~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~--------~~~~~r~~~~~~~~~~~~~l~G~ 80 (420)
+++++++..+|+++ |+++||+|||+++..+.+++++++++++++ ++ .+++.| +++|+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R------------~l~G~ 130 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCK------------MAQGF 130 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH------------HHHHh
Confidence 57788999999999 999999999999999999999999999998 54 388999 99999
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhh------------hhhhHHHHHhHhhhccccccce
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGA------------VLHWRTVAWLSLAYILIPSPVW 148 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~------------~~~wr~~f~~~~~~~~~~~~~~ 148 (420)
+.| ...+...+++.|++|+++|+++.++...+..+|..+++.+.. ..|||+.|++.+++.++.....
T Consensus 131 g~g-~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~ 209 (490)
T PRK10642 131 SVG-GEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR 209 (490)
T ss_pred HhH-hhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHH
Confidence 999 666679999999999999999999999888888877764432 2389999999876655431011
Q ss_pred eeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHH
Q psy6665 149 LLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIF 228 (420)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
...+++++.. +..++..+ ... +.. .++++.++++.++ + .++......... +.....++....
T Consensus 210 ~~~~esp~~~-~~~~~~~~---~~~--------~~~--~~~~~~~~~~~~~-~--~~~~~~~~~~~~-~~~~~~~~~~~~ 271 (490)
T PRK10642 210 HALEETPAFQ-QHVDKLEQ---GDR--------EGL--QDGPKVSFKEIAT-K--HWRSLLTCIGLV-IATNVTYYMLLT 271 (490)
T ss_pred HcCCCChhHH-HHHHhhhh---hcc--------ccc--cccccCCHHHHHH-H--hHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 1112221110 00000000 000 000 0011223444443 1 222233222222 222334667788
Q ss_pred hHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHHHHHHH-HH
Q psy6665 229 YAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIPVFCIL-FY 292 (420)
Q Consensus 229 ~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~~~~~~-~~ 292 (420)
|.|.++++. |+ ..+.........++.+++.++.|+++||+|||+.+..+... ......+... +.
T Consensus 272 ~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (490)
T PRK10642 272 YMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLM 351 (490)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 999999764 77 45555666667788889999999999999999887665432 0111111111 11
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
.........+....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+..+++..++++..+.+++..+.. ++.|
T Consensus 352 ~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~p 430 (490)
T PRK10642 352 LAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMK 430 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhc
Confidence 111111223344577789999999999999877778888899999999998876645555555555555555544 4568
Q ss_pred cCCCCC
Q psy6665 373 ETHGRT 378 (420)
Q Consensus 373 ~~~~~~ 378 (420)
|++++.
T Consensus 431 es~~~~ 436 (490)
T PRK10642 431 ETANRP 436 (490)
T ss_pred cccCCC
Confidence 876543
No 7
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.4e-32 Score=260.81 Aligned_cols=363 Identities=26% Similarity=0.452 Sum_probs=257.0
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~ 76 (420)
.+..+.....+++.++..++.++ |+++||+|||++++.+.++.+++.+++.+. ++.+++.| +
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r------------~ 135 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGR------------V 135 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHH------------H
Confidence 34677888999999999999999 999999999999999999999999988665 45889999 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHh---hh----hhhHHHHHhHhhhcccc-----
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALG---AV----LHWRTVAWLSLAYILIP----- 144 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~---~~----~~wr~~f~~~~~~~~~~----- 144 (420)
++|++.+ ...+....++.|++|+++|++++++.+.+..+|..+++.++ .. .+||+.|++.++..++.
T Consensus 136 l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~ 214 (481)
T TIGR00879 136 LLGIGVG-IASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLF 214 (481)
T ss_pred HHHhhhh-HHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 77777899999999999999999999999999999999998 33 38999998866555443
Q ss_pred ----ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHh---hhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHH
Q psy6665 145 ----SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELK---KMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFAL 217 (420)
Q Consensus 145 ----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (420)
.|.+...+++.++.++...+..+.+.......+..+ .....+.+..+..+.+.++..+..+++.++...+..+
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (481)
T TIGR00879 215 FLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWF 294 (481)
T ss_pred cCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHH
Confidence 111111112222222222221111110000000000 0000000001111233333111134455555555555
Q ss_pred HHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------h-------
Q psy6665 218 QQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------K------- 281 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------~------- 281 (420)
..........++.|.+.++.|+ ..+.........++.+++.++.++++||++||+.+..+..+ .
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (481)
T TIGR00879 295 QQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFV 374 (481)
T ss_pred HHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5555566677888988888788 66667778888899999999999999999999887766444 1
Q ss_pred -------hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHH
Q psy6665 282 -------SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQW 354 (420)
Q Consensus 282 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~ 354 (420)
.........++..++..+..+....+..|.+|++.|+++.|+.+...+++++++|.+.+.+.++.| +...++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~-~~~~f~ 453 (481)
T TIGR00879 375 TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG-VGGVFI 453 (481)
T ss_pred CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccceeh
Confidence 111222333344444555556667888999999999999999999999999999999999999888 888888
Q ss_pred HHHHHHHHHHHHhhhccccCCCCCh
Q psy6665 355 FFALISVISIVYVYIFLPETHGRTL 379 (420)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (420)
+.++++++++++.+++.||+++++.
T Consensus 454 ~~~~~~~~~~i~~~~~~~~~~~~~~ 478 (481)
T TIGR00879 454 FFGGLNVLGLIFVYFFLPETKGRTL 478 (481)
T ss_pred hHHHHHHHHHHHHheecccCCCCCh
Confidence 8888888888887777788776554
No 8
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.5e-32 Score=260.88 Aligned_cols=350 Identities=20% Similarity=0.250 Sum_probs=246.2
Q ss_pred cchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHH
Q psy6665 5 MNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
..+.....+++.+|.+++.++ |+++||+|||++++++.++.+++.++++++ ++.+++.| ++.|++
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r------------~l~G~~ 193 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR------------LLVGMG 193 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH------------HHHHhh
Confidence 456678889999999999999 999999999999999999999999999888 99999999 999999
Q ss_pred hhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-hhHHHHHhHhhhcccc---------ccceeee
Q psy6665 82 VIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-HWRTVAWLSLAYILIP---------SPVWLLN 151 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-~wr~~f~~~~~~~~~~---------~~~~l~~ 151 (420)
.+ ...+...+++.|++|+++|+++.++...+..+|.++++.++..+ +||+.+++.+++.++. +|+|+..
T Consensus 194 ~~-~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~ 272 (505)
T TIGR00898 194 IG-GIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLSWFVPESPRWLIS 272 (505)
T ss_pred cc-chHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 99 76666999999999999999999999999999999999988776 8999999887766554 6677777
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhH-HHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKE-QELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYA 230 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
+++.+++.+.+++..+.+......+ .+.+.++..++++++.+.++.++ ++..+...+.....+.. ....++.
T Consensus 273 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~------~~~~~~~ 345 (505)
T TIGR00898 273 QGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFR-TPNLRKTTLCLMMLWFT------TAFSYYG 345 (505)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhC-ChHHHHHHHHHHHHHHH------HHHHHHH
Confidence 7777777666665544322111100 00000000001111234555554 44444333333222221 1122222
Q ss_pred HHH-HHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hh-HHHHHHHHHHHHHH
Q psy6665 231 VQF-LEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KS-LIPVFCILFYVAIS 296 (420)
Q Consensus 231 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~-~~~~~~~~~~~~~~ 296 (420)
..+ ..+.+. +........++..+++.++.+++.||+|||+.+..+..+ .. ........+...+.
T Consensus 346 ~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 346 LVLDLGNLGG--NIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred HhccccccCC--ChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 222 222222 344555667788899999999999999999887776554 11 11122222222222
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
..+..+..+++..|.+|++.|+++.|+.+....+|++++|.+.+ + +..+ ...++.+++++.+++.+.. +++||+++
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~-~~~~~~~~~~~~~~~~~~~-~~lpet~~ 499 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKW-LFLPLVLFGGLALLAGILT-LFLPETKG 499 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHH-HhhHHHHHHHHHHHHHHHH-HcCcCCCC
Confidence 33345666789999999999999999999999999999999998 4 3344 5678888888777776665 57789887
Q ss_pred CChH
Q psy6665 377 RTLL 380 (420)
Q Consensus 377 ~~~~ 380 (420)
++++
T Consensus 500 ~~l~ 503 (505)
T TIGR00898 500 VPLP 503 (505)
T ss_pred CCCC
Confidence 7654
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.7e-38 Score=299.02 Aligned_cols=361 Identities=27% Similarity=0.459 Sum_probs=284.4
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHHHHHH
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILFYVAI 80 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~l~G~ 80 (420)
......+...+|..+|+++ |+++||+|||+.++++.++..+++++.+++ ++.+.++| ++.|+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R------------~~~G~ 114 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGR------------FLIGF 114 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccc------------ccccc
Confidence 4567788999999999999 999999999999999999999999998887 68899999 99999
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----h---hHHHHHhHhhhcccc---------
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----H---WRTVAWLSLAYILIP--------- 144 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~---wr~~f~~~~~~~~~~--------- 144 (420)
+.| ...+....++.|..|+++|++..++.+.+..+|.+++..++... + ||..+++..+++++.
T Consensus 115 ~~g-~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pE 193 (451)
T PF00083_consen 115 GIG-GAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPE 193 (451)
T ss_pred ccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999 76777999999999999999999999999999999888776544 4 999999888887544
Q ss_pred ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchh
Q psy6665 145 SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIY 224 (420)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
+|+|+..+++.+|+++.+++.++.+...++..++. ++.++.++.+..++++++ ++..+++....+.+..+.+..+.+
T Consensus 194 SP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~l~~~~~~~g~~ 270 (451)
T PF00083_consen 194 SPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIK--AEKKESQESKASWRDLFR-NKKYRKRLLIALLLQFFQQFSGIN 270 (451)
T ss_pred ccceecccccccccccccccccccccccccccccc--cccccccccceeeeeccc-cccccccccccccccccccccccc
Confidence 99999999999999888877655432222211111 112222222244556655 444566667777777777677777
Q ss_pred hHHHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------------h----hH
Q psy6665 225 ITIFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------------K----SL 283 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------------~----~~ 283 (420)
...+|.+.++++.+...+ ........+...++.+++.++.||+|||+.++.+... . ..
T Consensus 271 ~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (451)
T PF00083_consen 271 FIFYYSPSIFENAGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSI 349 (451)
T ss_pred cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 788888888877776333 4445566677888888888999999999887766655 1 11
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHH
Q psy6665 284 IPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVIS 363 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 363 (420)
..+.........+..++.+..+.+..|++|++.|+++.|+....+++++++.|.+.+.+.+..+ ....+.++++++++.
T Consensus 350 ~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 350 LSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIA 428 (451)
T ss_pred ccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHHHH
Confidence 2222333344455667788888999999999999999999999999999999999999888877 678888888888899
Q ss_pred HHHhhhccccCCCCChHHHHHH
Q psy6665 364 IVYVYIFLPETHGRTLLEIEEY 385 (420)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~ 385 (420)
.++.++++|||++++.+|+++.
T Consensus 429 ~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 429 IIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HhheeEEEeeCCCCCHHHHHhh
Confidence 8888999999999999998875
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-32 Score=238.17 Aligned_cols=345 Identities=16% Similarity=0.101 Sum_probs=261.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+.|.++.....+.+.+.+.++-.. |.++||.+.|+.+.+++++.++.+++++++ .+.+.+.. ++.
T Consensus 60 ~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~------------~ln 127 (448)
T COG2271 60 GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLW------------VLN 127 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHH------------HHH
Confidence 467888899999999999999999 999999999999999999999999999998 77778888 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHh--hhh----hhHHHHHhHhhhcccc-ccceeee
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALG--AVL----HWRTVAWLSLAYILIP-SPVWLLN 151 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~--~~~----~wr~~f~~~~~~~~~~-~~~~l~~ 151 (420)
|..+| +..+++...++.|+|++|||+..++++.+.++|..+.|.+. ..+ +||..|++.++++++. ...++..
T Consensus 128 g~fQg-~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~ 206 (448)
T COG2271 128 GWFQG-MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLL 206 (448)
T ss_pred HHHhc-CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 88888999999999999999999999999999998888877 544 8999999999998877 3334444
Q ss_pred cCcHHHH-HHHHHHHhcchhhhhhhHHHHhhhccchhhhhh-hhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 152 KGRANQA-LKSLKYLARNYKEVKNKEQELKKMNSTKENQSL-SARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 152 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
|+++++. .+...+.++++.+. . +++++.+ .+.++++. +-.++++.++...+...+....=+.+..|
T Consensus 207 rd~Pqs~GLP~ie~~~~d~~e~---------~--~~~~~~~~ls~~~i~~-~YVL~Nk~iW~la~a~vfvYivR~gi~dW 274 (448)
T COG2271 207 RDRPQSEGLPPIEEYRGDPLEI---------Y--EEEKENEGLTAWQIFV-KYVLKNKLIWLLALANVFVYVVRYGINDW 274 (448)
T ss_pred CCCccccCCCCHHHhhcCchhh---------h--hhhccCCCccHHHHHH-HHHHcChHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444331 11111111111110 0 1111111 23344443 33445556666666555555567889999
Q ss_pred HHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc--CchhhHhhhccc--------------hhHHHHHHHHH
Q psy6665 230 AVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY--GRRSLTMFSQIE--------------KSLIPVFCILF 291 (420)
Q Consensus 230 ~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~~~~~--------------~~~~~~~~~~~ 291 (420)
.|.|+.+. |+ ..++....+.+-.++++|++++|+++||+ |||....+.+.+ .++......++
T Consensus 275 ~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~ 354 (448)
T COG2271 275 GPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLF 354 (448)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHH
Confidence 99999887 88 88889999999999999999999999997 566544333222 22334444444
Q ss_pred HHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHH-HHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 292 YVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI-LMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
..+++..|..-+.-....|..|++..|++.|+...+.++ |...+....|++.|.+| |...|.++.+.++++.++....
T Consensus 355 ~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 355 IIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred HHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHHH
Confidence 555555565545557888999999999999999999999 88899999999999988 8888888888777777765544
Q ss_pred cc
Q psy6665 371 LP 372 (420)
Q Consensus 371 ~~ 372 (420)
..
T Consensus 434 ~~ 435 (448)
T COG2271 434 WN 435 (448)
T ss_pred Hh
Confidence 43
No 11
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=7.6e-31 Score=244.11 Aligned_cols=336 Identities=13% Similarity=0.102 Sum_probs=229.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++..+..+++.+++.+++++ |+++||+|||+++..+.+++++++++++++ ++.+++.| ++
T Consensus 38 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~l 105 (412)
T TIGR02332 38 LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLR------------IL 105 (412)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH------------HH
Confidence 4677888999999999999999999 999999999999999999999999999988 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----------hhHHHHHhHhhhcccc-cc
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----------HWRTVAWLSLAYILIP-SP 146 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----------~wr~~f~~~~~~~~~~-~~ 146 (420)
+|++.+ ...+....++.|++|+++|++++++++.+.++|..+++.++..+ |||+.|++.+++.++. ..
T Consensus 106 ~G~~~~-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~ 184 (412)
T TIGR02332 106 VGIAEA-GFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM 184 (412)
T ss_pred HHHHHh-hHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 999999 77776788999999999999999999999999999998887542 8999999987776554 22
Q ss_pred ceeeecCcHHH-------HHHHHHHH-hcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHH
Q psy6665 147 VWLLNKGRANQ-------ALKSLKYL-ARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQ 218 (420)
Q Consensus 147 ~~l~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (420)
.++..++++++ .++...+. +.+..+.++ .+ .+..+++...+..++ ..+.+.++......+.
T Consensus 185 ~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 253 (412)
T TIGR02332 185 TWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQ-------PE-GAFAHAAMPQRSMLR---EIFTPAIMLYTLAYFC 253 (412)
T ss_pred HhhccCCCcccCCCCCHHHHHHHHHHHHhccccccc-------cc-cccccccccHHHHHH---HhcChHHHHHHHHHHH
Confidence 33333433321 11100000 000000000 00 000000111111111 0112223333344444
Q ss_pred HhcchhhHHHhHHHHHHhh--CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhH-hhhccc----------hhHH
Q psy6665 219 QLAGIYITIFYAVQFLEDM--GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLT-MFSQIE----------KSLI 284 (420)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~----------~~~~ 284 (420)
.....+.+..|.|.++++. ++ ..+.+.......++.+++.++.|+++||+++|+.. ...... ....
T Consensus 254 ~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 333 (412)
T TIGR02332 254 LTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHN 333 (412)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 4445677889999999874 55 56667778888999999999999999999876642 222111 1111
Q ss_pred HHHHHHHHHHHH-hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHH
Q psy6665 285 PVFCILFYVAIS-VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALIS 360 (420)
Q Consensus 285 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 360 (420)
......+....+ .....+..+....|.+|++.|+++.|+.+...++|++++|.+.|.+.|..|++...+.+.+++.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 334 LIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 111111111111 1112233445567889999999999999999999999999999999999876777776665543
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.1e-30 Score=245.01 Aligned_cols=349 Identities=10% Similarity=-0.005 Sum_probs=235.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||+++.++.++.+++.++++++ ++.+++.| ++
T Consensus 53 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l 120 (434)
T PRK11663 53 LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLW------------VL 120 (434)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHH------------HH
Confidence 3567778888899999999999999 999999999999999999999999998888 88888999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|++.| ...+...+++.|++|+++|++++++.+.+.++|..+++.+.+.+ +||+.|++.+++.++. ...++..+
T Consensus 121 ~g~~~g-~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~ 199 (434)
T PRK11663 121 NAFFQG-WGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLR 199 (434)
T ss_pred HHHHHH-ccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999 77777899999999999999999999999999999998877765 8999999887765543 11222223
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++.. ....++..++ .. +..++.++++.+.++.++ ....+++.++......+........+..|.|.
T Consensus 200 ~~p~~~~-----~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 268 (434)
T PRK11663 200 DKPQAMG-----LPSVGEWRHD---AL--ELAQQQEGAGLSRKEILT-KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNL 268 (434)
T ss_pred CCHhhcC-----CCCccccccc---cc--ccchhccccCCChhhhHH-HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3221110 0000000000 00 000000001112222221 11112223333333333333334567778999
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc--CchhhH-h---hhccc----------hhHHHHHHHHHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY--GRRSLT-M---FSQIE----------KSLIPVFCILFYVA 294 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~-~---~~~~~----------~~~~~~~~~~~~~~ 294 (420)
|+++. |+ ..+.+.......++.+++.++.|+++||+ ++|+.. . .+... .+........+..+
T Consensus 269 ~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 348 (434)
T PRK11663 269 YMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIG 348 (434)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 98654 77 67777888888999999999999999998 332221 1 11111 11111111111112
Q ss_pred HHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
.+..+..........|.+|++.|+++.|+.+...++|++++|.+.|++.|+.| +...+...+++.++..+..+...+++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 349 FFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred HHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 22222222334567899999999999999999999999999999999999999 88899888888888777665444443
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.98 E-value=3.5e-31 Score=250.76 Aligned_cols=343 Identities=13% Similarity=-0.020 Sum_probs=230.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHH-----h--HHHHHhhccccccchhH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGY-----Y--TQLIMTGQIEKSLIPVF 72 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~--~~~~~~~r~~~~~~~~~ 72 (420)
+|.+.++.....+.+.+++.+++++ |+++||+|||+++..+.++++++.+..++ + ++.+++.|
T Consensus 59 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r--------- 129 (467)
T PRK09556 59 YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALW--------- 129 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH---------
Confidence 4667788899999999999999999 99999999999999999888888777665 2 88899999
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-------hhHHHHHhHhhhcccc-
Q psy6665 73 CILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-------HWRTVAWLSLAYILIP- 144 (420)
Q Consensus 73 ~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-------~wr~~f~~~~~~~~~~- 144 (420)
+++|++.+ ...+...+++.||+|+++|++++++...+.++|..+++.+.... +||..|.+.+++.++.
T Consensus 130 ---~l~G~~~~-~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~ 205 (467)
T PRK09556 130 ---ALSGFFQS-TGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIG 205 (467)
T ss_pred ---HHHHHHHh-ccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Confidence 99999999 77777899999999999999999999999999999988776532 4888888777666554
Q ss_pred ccceeeecCcHHHHHH-HHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcch
Q psy6665 145 SPVWLLNKGRANQALK-SLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGI 223 (420)
Q Consensus 145 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (420)
.+.++..++++++... ..++..+ +...+ ++ ++.++++.+..+.+. +...+.+.++...+..+......
T Consensus 206 i~~~~~~~~~p~~~~~~~~~~~~~-~~~~~--------~~-~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 274 (467)
T PRK09556 206 FIGLRYGSDSPEELGWGKAEEIFG-EPISE--------ED-KETESTDMTKWQIFV-EYVLKNPVIWLLCFANIFLYIVR 274 (467)
T ss_pred HHHHHhCCCChhhcCCCChhhccc-Cccch--------hh-hccccccCcHHHHHH-HHHHcChHHHHHHHHHHHHHHHH
Confidence 2223333333222100 0000000 00000 00 000000111111111 11122333343433333333345
Q ss_pred hhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHHHHH
Q psy6665 224 YITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIPVFC 288 (420)
Q Consensus 224 ~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~~~~ 288 (420)
.....|.|.|+++. |+ ..+++.......++.+++.++.|+++||++||+.+...... .+......
T Consensus 275 ~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (467)
T PRK09556 275 IGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLA 354 (467)
T ss_pred HHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 56788999999764 88 66777888888899999999999999999988765433221 11111111
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHH-HHHHHHHHhHHHHH------------hcCcchHHHHH
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI-LMFFALQYYPWFKD------------SVGGSAMVQWF 355 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~~~~~~g~l~~------------~~g~~~~~~~~ 355 (420)
..+..+....+..........|.+|++.+|++.|+.+...++ +.+++|.+.|++.| ..| |...|.+
T Consensus 355 ~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~ 433 (467)
T PRK09556 355 SLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAA 433 (467)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHH
Confidence 111222122222222235667999999999999999999997 66999999999999 556 8888888
Q ss_pred HHHHHHHHHHHhh
Q psy6665 356 FALISVISIVYVY 368 (420)
Q Consensus 356 ~~~~~~~~~~~~~ 368 (420)
..++.+++.+...
T Consensus 434 ~~~~~~~~~~~~~ 446 (467)
T PRK09556 434 LDIAAIGCICLMA 446 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 8777777665554
No 14
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=4.5e-30 Score=237.73 Aligned_cols=329 Identities=15% Similarity=0.106 Sum_probs=236.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.|.++..+..+.+.+++.+++++ |+++||+|||+++..+..+++++.+.++++ ++.+++.| ++
T Consensus 39 ~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r------------~l 106 (393)
T PRK09705 39 SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA------------LL 106 (393)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH------------HH
Confidence 4778888999999999999999999 999999999999999999999999999998 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~~~ 152 (420)
+|++.+ ...+....++.|++| ++|+++++++..+..+|..+++.+++.+ +||..+.+.++..++....++...
T Consensus 107 ~Gig~~-~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 107 GGVGIG-IIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHhHHH-HHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999 777778899999997 7899999999988888887777776654 799987665554433211111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.++ .++ ++ +.+..+.+ +++..+...+..+...........|.|.
T Consensus 185 ~~~~~--------------~~~-------~~-------~~~~~~~l------~~~~~~~l~~~~~~~~~~~~~~~~~lp~ 230 (393)
T PRK09705 185 AREVA--------------SSH-------KT-------TTTPVRVV------FTPRAWTLGVYFGLINGGYASLIAWLPA 230 (393)
T ss_pred cCCCc--------------ccc-------CC-------CcCCcccc------cCHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10000 000 00 00001111 1111122222222223345677889999
Q ss_pred HHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhch
Q psy6665 233 FLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGM 300 (420)
Q Consensus 233 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 300 (420)
++++.|+ ..+.+.......++.++++++.+++.||++||+....+..+ .......... ..+......
T Consensus 231 ~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-l~g~g~g~~ 309 (393)
T PRK09705 231 FYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLWAM-VCGLGLGGA 309 (393)
T ss_pred HHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHHHH-HHHHhccch
Confidence 9988788 77788888899999999999999999999999887666544 1111111111 111112223
Q ss_pred hhHHHHHhcccC-ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCCCC
Q psy6665 301 LSIPWTMTAEIF-PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHGRT 378 (420)
Q Consensus 301 ~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (420)
.+.......+.. |++.+++..|+.+...++++.++|.+.|++.|+.|++...+.+.++.+++..++...+.||++++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 310 FPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 454555555666 467899999999999999999999999999999987777888878777777777777888877654
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.98 E-value=6.1e-30 Score=238.74 Aligned_cols=329 Identities=13% Similarity=0.141 Sum_probs=231.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||+++..+.++..++.+++.+. ++.+++.| ++
T Consensus 45 ~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l 112 (406)
T PRK11551 45 FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVAR------------LL 112 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 3567778889999999999999999 999999999999999999999998888877 88899999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccc-ceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSP-VWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~-~~l~~~ 152 (420)
.|++.+ ...+...+++.|++|+++|++++++.+.+..+|..+++.++..+ +||+.|++.+++.++..+ .+...+
T Consensus 113 ~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 191 (406)
T PRK11551 113 TGVGLG-GALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLP 191 (406)
T ss_pred HHhhHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 77777899999999999999999999999999999999887654 799999887765444311 111112
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++.++ +. ++++++......++ .+..++ ........+......+....|.|.
T Consensus 192 ~~~~~~~~-------~~----------------~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~ 245 (406)
T PRK11551 192 ESRAFAQA-------AG----------------AGKQRAPVLRALFG-EGRATA--TLLLWISYFFTLIVLYFLLNWLPS 245 (406)
T ss_pred CChhHHhc-------cC----------------cchhhhhhHHHHhh-hhhhhH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111000 00 00000001111111 111111 111111122222234556778899
Q ss_pred HHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhch
Q psy6665 233 FLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGM 300 (420)
Q Consensus 233 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 300 (420)
++++.|+ ..+.+.......++.+++.++.|++.||++||+.+..+... .+........+..+....+.
T Consensus 246 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 325 (406)
T PRK11551 246 LLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGG 325 (406)
T ss_pred HHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhH
Confidence 9988888 77788888888999999999999999999999887654433 11222222222233333344
Q ss_pred hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 301 LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 301 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+...++..|.+|++.|+++.|+.+....++..++|.+.|.+.++.+++...+.......+++.+..+
T Consensus 326 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 326 QSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHH
Confidence 56667889999999999999999999999999999999999999876344555555555555554443
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.98 E-value=1.3e-29 Score=237.96 Aligned_cols=320 Identities=15% Similarity=0.117 Sum_probs=220.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+.+.++..+++++ |+++||+|||+++..+.++.+++.++++++ ++.+++.| ++
T Consensus 48 ~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~l 115 (426)
T PRK12307 48 LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSR------------FI 115 (426)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH------------HH
Confidence 3566777888889999999999999 999999999999999999999999998888 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecC
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKG 153 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~ 153 (420)
+|++.+ ...+....++.|++|+++|+++.++...+..+|.++++.+...+ +||+.|++..+..++. .++. ..
T Consensus 116 ~G~g~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~--~~~~-~~ 191 (426)
T PRK12307 116 VGMGMA-GEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLV--IYIR-AR 191 (426)
T ss_pred HHHHHh-hHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHH--HHHH-HH
Confidence 999999 66666899999999999999999999999999999998877654 8999998865544332 1111 10
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
.+++.+...++..+ + .+ +.....+..+.+.++.++ ++..+. ...... ..+......+.+..+.|.+
T Consensus 192 ~p~~~~~~~~~~~~-~--~~--------~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 257 (426)
T PRK12307 192 APESKEWEEAKLSG-K--GK--------HSQSAWSVFSLSMKGLFN-RAQFPL-TLCVFI-VLFSIFGANWPIFGLLPTY 257 (426)
T ss_pred CCCChHHHHhhhhc-c--cc--------ccccchhhhhHHHHHHHh-hchHHH-HHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 00000000000000 0 00 000000001123344443 222221 111111 1222222234466788988
Q ss_pred HHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h-hHHHHHHHHHHHH-HHhhc
Q psy6665 234 LEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K-SLIPVFCILFYVA-ISVIG 299 (420)
Q Consensus 234 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~-~~~~~~~~~~~~~-~~~~~ 299 (420)
+++.|. +...+.......++.+++.++.+++.||++||+.+..+..+ . ..........+.. ....+
T Consensus 258 ~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 258 LAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVG 337 (426)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhccc
Confidence 888777 66677777888899999999999999999999887766544 0 1111111111111 11223
Q ss_pred hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchH
Q psy6665 300 MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAM 351 (420)
Q Consensus 300 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~ 351 (420)
..+....++.|.+|++.|+++.|+.+....+++.++|.+.|++.+..| +..
T Consensus 338 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~ 388 (426)
T PRK12307 338 VGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGA 388 (426)
T ss_pred HhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHH
Confidence 344555778899999999999999999999999999999999999988 543
No 17
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=5.4e-30 Score=238.41 Aligned_cols=345 Identities=13% Similarity=0.038 Sum_probs=238.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+++.++..++.++ |+++||+|||+++..+.++.+++.++++++ ++.+++.| ++
T Consensus 24 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l 91 (399)
T TIGR00893 24 LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR------------VL 91 (399)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH------------HH
Confidence 3567788889999999999999999 999999999999999999999999999888 89999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|++.+ ...+....++.|++|+++|++++++.+...++|..+++.+++.+ +||+.|++.+++.++. ...++..+
T Consensus 92 ~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (399)
T TIGR00893 92 LGAAEA-PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIP 170 (399)
T ss_pred HHHHHH-hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheec
Confidence 999999 77777999999999999999999999999999999999888765 8999999887766554 11222222
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++.+...++.++...+.. ..+.++.+++++.+...++.++ ++.++......+...........+.|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 171 DPPQKAKWLTEEEKYIVVGGL----LAEQQGKGPSTPKKYQIKELLK------DRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred CCCCccccCCHHHHhhcchhh----ccccccccccCCCccchHHHhc------CHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 222111000000000000000 0000000011111122233332 222333333333333446667788898
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchh--------hHhhhccc--------h--hHHHHHHHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRS--------LTMFSQIE--------K--SLIPVFCILFY 292 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~--------~~~~~~~~--------~--~~~~~~~~~~~ 292 (420)
++++. |. ..+.+.......++.+++.++.+++.||++||+ ....+... . ...........
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 88765 77 667777888888999999999999999999985 11111111 1 11112222222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
..++..+..+..+++..|.+|++.|+++.|+.+....++..++|.+.|.+.+..|++...+.+.+++.+++.+..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 321 LGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 2333334567778999999999999999999999999999999999999999887566777777776666655543
No 18
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=4.2e-29 Score=231.52 Aligned_cols=321 Identities=15% Similarity=0.090 Sum_probs=231.0
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++..+..+.+.++..+++++ |+++||+|||+++..+.++.+++++.++++ ++.+++.| ++
T Consensus 39 ~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~~ 106 (390)
T PRK03545 39 FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISR------------IG 106 (390)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 4677888889999999999999999 999999999999999999999999999988 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc-cceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS-PVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~-~~~l~~~ 152 (420)
+|++.+ ...+...+++.|++|+++|++++++...+.++|..++|.++..+ |||+.|++.++++++.. ..+...+
T Consensus 107 ~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 107 IAFAHA-IFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred HHHHHH-HHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 77777889999999999999999999999999999998887665 89999999888766541 1111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++ +++..++.++.++ ++..+. ......+ .. ...+....+.+.
T Consensus 186 ~~~~~-----------------------------~~~~~~~~~~~~~-~~~~~~-~~~~~~~---~~-~~~~~~~~~~~~ 230 (390)
T PRK03545 186 LLPSE-----------------------------HSGSLKSLPLLFR-RPALVS-LYLLTVV---VV-TAHFTAYSYIEP 230 (390)
T ss_pred CCCCC-----------------------------CcchHHHHHHHHh-CcHHHH-HHHHHHH---HH-HHHHHHHHHHHH
Confidence 10000 0000111223332 222221 1111111 11 123334556777
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhc
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIG 299 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 299 (420)
++++. |. ..+.+.......++.++++++.+++.||+++|......... .+...........+.....
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~ 310 (390)
T PRK03545 231 FVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMC 310 (390)
T ss_pred HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhc
Confidence 77664 77 66777788888899999999999999999988654433322 1111111222222222223
Q ss_pred hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 300 MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 300 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
..+.......|..| +.|++++|+.+...++|..++|.+.|.+.|+.| +...+...+.+.+++.+......
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 311 IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHHc
Confidence 34444567777766 578999999999999999999999999999999 88889888888888877765554
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=8.2e-29 Score=219.18 Aligned_cols=318 Identities=15% Similarity=0.154 Sum_probs=239.0
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
++.|.....+.++.|.++..+++++ ..+.||+.||++++..+.++.+++++++++ |+.++++| ++
T Consensus 43 l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR------------~~ 110 (394)
T COG2814 43 LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLAR------------AL 110 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 5778889999999999999999999 999999999999999999999999999999 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|+..| .+.+...++..+..||++|++++++...+.+++..+|..++.++ |||..|+..+.++++. ...|...+
T Consensus 111 ~g~a~G-~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 111 AGLAHG-VFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHH-HHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 77777999999999999999999999999988777666555554 9999999999988876 11111111
Q ss_pred -CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHH
Q psy6665 153 -GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAV 231 (420)
Q Consensus 153 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
++. +++.+.+.++.++ ..+++.++......+....+.+..++|..
T Consensus 190 ~~~~-------------------------------~~~~~~~~~~~~~---~l~~p~v~~~l~~t~l~~~g~F~~ftYi~ 235 (394)
T COG2814 190 PSEI-------------------------------SGSLPGPLRTLLR---LLRRPGVLLGLLATFLFMTGHFALYTYIR 235 (394)
T ss_pred CccC-------------------------------CCCCCcchhHHHH---HhcCchHHHHHHHHHHHHcchhhhHHhHH
Confidence 000 0000111112221 22333444444445555556788888888
Q ss_pred HHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhh
Q psy6665 232 QFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVI 298 (420)
Q Consensus 232 ~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 298 (420)
.++++. |+ .....+....++++.++|+.++|++.|| +.|+.+.....+ .+........... ++.
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~--wg~ 312 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFL--WGF 312 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH--HHH
Confidence 888887 88 7888999999999999999999999999 777766655443 2222222222222 233
Q ss_pred chhhHHH---HHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 299 GMLSIPW---TMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 299 ~~~~~~~---~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
...+... ....+. -++.+..+.+++....++|..+|..+.|.+.|+.| +....++.+.+.+++..+....
T Consensus 313 a~~~~~~~~~~~~a~~-~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~ 385 (394)
T COG2814 313 AFSPALQGLQTRLARL-APDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALLS 385 (394)
T ss_pred HhhhhhhHHHHHhccc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333 444443 35778999999999999999999999999999988 8888888888887777766433
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=2e-29 Score=229.86 Aligned_cols=319 Identities=12% Similarity=-0.017 Sum_probs=212.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.+++.+++++ |+++||+|||+++..+......+.+..... ++.+++.| ++
T Consensus 21 ~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R------------~l 88 (368)
T TIGR00903 21 IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ------------LL 88 (368)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 4677888889999999999999999 999999999998776655554544333332 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccc-ceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSP-VWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~-~~l~~~ 152 (420)
+|++.+ ...+ ....++|++|+++|++++++.+.+..+|..+++.++..+ |||+.|++.++++++... .++..+
T Consensus 89 ~G~g~~-~~~~-~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 89 AALGQP-FLLN-AFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHhHhH-HHHH-HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999 6554 666779999999999999999999999999999888877 999999997777655411 122222
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++.. +.. +.++..+++++.++ + +.++......+......+.+..|.|.
T Consensus 167 ~~p~~~~----------------------~~~-~~~~~~~~~~~ll~-~-----~~~~~~~~~~~~~~~~~~~~~~wlp~ 217 (368)
T TIGR00903 167 ALPFQAA----------------------EGF-GFKDAVKEFGALAG-R-----KDLWIIGAILGFGVALFDNLAIWLEA 217 (368)
T ss_pred CCCCCCC----------------------CCc-chHHHHHHHHHHHc-C-----hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111100 000 00000112334443 2 22344444444444457788899999
Q ss_pred HHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCch---hhHhh-hccc-----------hhHHHHHHHHHHHHHHh
Q psy6665 233 FLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR---SLTMF-SQIE-----------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---~~~~~-~~~~-----------~~~~~~~~~~~~~~~~~ 297 (420)
++++.|++...+.......+.+. +..++++||..|| +.... .... .+............++.
T Consensus 218 ~L~~~g~s~~~~~~~~l~~~~g~---~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~ 294 (368)
T TIGR00903 218 ALRPAGLEDIAGDAVALAILAGL---IGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLM 294 (368)
T ss_pred HHHHCCCChHHHHHHHHHHHHHH---HHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhh
Confidence 99877773334444444444444 4457788887543 22221 1111 11111111122222223
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+..+..+++.+|.+|++.|+++.|+.+..+++++..+|.+.+.+.. | ....|.++++..+++.+...
T Consensus 295 ~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 295 LPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHH
Confidence 33345567899999999999999999999999999999999988773 5 67788888887777777653
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.97 E-value=2.9e-29 Score=235.39 Aligned_cols=315 Identities=16% Similarity=0.174 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--H--------HHHHhhccccccchhHHHHHH
Q psy6665 9 LATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--T--------QLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 9 ~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~--------~~~~~~r~~~~~~~~~~~~~l 77 (420)
...++..+++..+|+++ |+++||+|||+++..+.+++++++++++++ + ..+++.| ++
T Consensus 66 ~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R------------~l 133 (432)
T PRK10406 66 AGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLAR------------LF 133 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHH------------HH
Confidence 34556667777799999 999999999999999999999999999876 3 2588999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhh------------hhhhHHHHHhHhhhccccc
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGA------------VLHWRTVAWLSLAYILIPS 145 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~------------~~~wr~~f~~~~~~~~~~~ 145 (420)
+|++.| ...+...+++.|++|+++|+++.++.+.+...|.++++.+.. ..|||++|++.+++.++.
T Consensus 134 ~G~g~g-~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~- 211 (432)
T PRK10406 134 QGLSVG-GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA- 211 (432)
T ss_pred HHhhhh-hhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH-
Confidence 999999 666779999999999999999999998888888877775432 238999999988877664
Q ss_pred cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 146 PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
.++ ++ ..+|.++ .+. ++ .+++.++++.++ ++ +.........+......+.
T Consensus 212 -~~~-~~-~~~e~~~-----------~~~-------~~----~~~~~~~~~l~~-~~----~~~~~~~~~~~~~~~~~~~ 261 (432)
T PRK10406 212 -LWL-RR-QLDETSQ-----------QET-------RA----LKEAGSLKGLWR-NR----RAFIMVLGFTAAGSLCFYT 261 (432)
T ss_pred -HHH-Hh-cCCCCch-----------HHH-------hh----hcccccHHHHHh-hH----HHHHHHHHHHHHHHHHHHH
Confidence 221 11 1111000 000 00 001123344443 11 1112222222222234566
Q ss_pred HHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---h----------h-HHHHHHH
Q psy6665 226 TIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---K----------S-LIPVFCI 289 (420)
Q Consensus 226 ~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---~----------~-~~~~~~~ 289 (420)
...|.|.++++. |+ ..+.+.......+...++.++.|+++||++||+.+.....+ . . .......
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 788999998764 77 55666667777777888889999999999999876654332 0 0 0011111
Q ss_pred HHHHHHHhhc-hhhHHHHHhcccCChhhhhhhHHHHHHHHHH-HHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 290 LFYVAISVIG-MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI-LMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 290 ~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
......+..+ ..+..+.+.+|.+|++.|+++.|+.+...++ .+...|.+.+. .+..|++...++..++..+++.+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~-l~~~g~~~~~~~~~~~~~~i~~~~~ 420 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALS-LKSIGMETAFFWYVTLMAVVAFLVS 420 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHH-HHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 1111111111 2344567889999999999999999988775 34457777775 4556634445555555555555554
Q ss_pred h
Q psy6665 368 Y 368 (420)
Q Consensus 368 ~ 368 (420)
+
T Consensus 421 ~ 421 (432)
T PRK10406 421 L 421 (432)
T ss_pred H
Confidence 4
No 22
>PRK09952 shikimate transporter; Provisional
Probab=99.97 E-value=1.2e-28 Score=231.18 Aligned_cols=322 Identities=16% Similarity=0.168 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HH--------HHHhhccccccchhHHHHHHHHHH
Q psy6665 13 LVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQ--------LIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 13 ~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~--------~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
++.+++..+|+++ |+++||+|||++++.+.+++++++++++++ ++ .+++.| +++|++
T Consensus 71 ~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R------------~l~G~~ 138 (438)
T PRK09952 71 GVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLR------------AIQGFA 138 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH------------HHHHhh
Confidence 4567788899999 999999999999999999999999999998 54 588899 999999
Q ss_pred hhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhh------------hhhhHHHHHhHhhhcccccccee
Q psy6665 82 VIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGA------------VLHWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~------------~~~wr~~f~~~~~~~~~~~~~~l 149 (420)
.| ...+....++.|++|+++|++..+..+.+..+|.+++..+.. ..+||.+|++.+++.++. .++
T Consensus 139 ~g-~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~--~~l 215 (438)
T PRK09952 139 VG-GEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA--LWV 215 (438)
T ss_pred hc-ccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH--HHH
Confidence 99 666668899999999999999999999999999888865543 248999999988776553 111
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHH-HHhhccccchHHHHHHHHHHHHHhcchhhHHH
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLI-KMVTMATGIKPLLVITVLFALQQLAGIYITIF 228 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+...+|..+..+. + .+.+ +.+++.+..+ .++ ++ +.... .....+......+....
T Consensus 216 --~~~~~es~~~~~~-~---------------~~~~-~~~~~~~~~~~l~~-~~---~~~~~-~~~~~~~~~~~~~~~~~ 271 (438)
T PRK09952 216 --RNGMEESAEFEQQ-Q---------------HEQA-AAKKRIPVIEALLR-HP---GAFLK-IIALRLCELLTMYIVTA 271 (438)
T ss_pred --HHhCCCChhHHHH-H---------------hhcc-cccccCCHHHHHHH-ch---HHHHH-HHHHHHHHHHHHHHHHH
Confidence 1111111100000 0 0000 0000111111 222 11 11111 11112222223556777
Q ss_pred hHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccch--------------hHHHHHHHHHH
Q psy6665 229 YAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIEK--------------SLIPVFCILFY 292 (420)
Q Consensus 229 ~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~--------------~~~~~~~~~~~ 292 (420)
|.|.|+++. |+ ...........++..+++.++.|+++||++||+.+..+..+. +....+.....
T Consensus 272 ~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T PRK09952 272 FALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIM 351 (438)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 888888654 66 333334444556777888999999999999998877664430 01111111111
Q ss_pred H-HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHH-HHHHHHHHHhHHHHHhcC-cchHHHHHHHHHHHHHHHHhhh
Q psy6665 293 V-AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAH-ILMFFALQYYPWFKDSVG-GSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 293 ~-~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~~~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
. ........+..+++..|.+|++.|+++.|+.+.... +++.++|.+.+++.+..+ ++...+...+++.+++.+..+
T Consensus 352 l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~- 430 (438)
T PRK09952 352 LANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL- 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-
Confidence 1 111122245567899999999999999999776654 889999999999988653 355666666666666655553
Q ss_pred ccccC
Q psy6665 370 FLPET 374 (420)
Q Consensus 370 ~~~~~ 374 (420)
..+|+
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 44543
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=6.1e-29 Score=234.47 Aligned_cols=343 Identities=11% Similarity=0.015 Sum_probs=221.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh------HHHHHhhccccccchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY------TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~ 74 (420)
|.+.++.....+.+.++..+++++ |+++||+|||++++.+.++.+++.+.+++. ++.+++.|
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~----------- 127 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL----------- 127 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH-----------
Confidence 456677888899999999999999 999999999999999999999998887763 55677888
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHH-HHHHHHhhh----hhhHHHHHhHhhhcccc-ccce
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGM-VIVYALGAV----LHWRTVAWLSLAYILIP-SPVW 148 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~-~~~~~~~~~----~~wr~~f~~~~~~~~~~-~~~~ 148 (420)
++.|++.+ ...+.....+.|++|+++|++++++.+.+.++|. +.++.++.. .+||+.|++.+++.++. ...+
T Consensus 128 -~l~gi~~g-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 128 -FLCGWFQG-MGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred -HHHHHHHh-ccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 7766577889999999999999999999999886 445544322 28999999887765553 1122
Q ss_pred eeecCcHHHHH-HHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHH
Q psy6665 149 LLNKGRANQAL-KSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITI 227 (420)
Q Consensus 149 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
+..++++++.. +...+..+ +.+ ++..++++++.+.++.+. +...+.+.++...+..+......+...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~ 273 (452)
T PRK11273 206 AMMRDTPQSCGLPPIEEYKN---DYP--------DDYNEKHEQELTAKQIFM-QYVLPNKLLWYIAIANVFVYLLRYGIL 273 (452)
T ss_pred HHccCCHhhcCCCChhhhhh---ccc--------cccccccCCCccHHHHHH-HHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 23333332210 00000000 000 000000000111122111 111122223333233222222345677
Q ss_pred HhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc--CchhhHh-hhccc------------hhHHHHHHHH
Q psy6665 228 FYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY--GRRSLTM-FSQIE------------KSLIPVFCIL 290 (420)
Q Consensus 228 ~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~-~~~~~------------~~~~~~~~~~ 290 (420)
.|.|.|+++. |+ ..+.+....+..++.+++.++.|+++||+ +||.... ....+ ..........
T Consensus 274 ~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 353 (452)
T PRK11273 274 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMAC 353 (452)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHH
Confidence 8999999875 77 56677777788889999999999999999 4443221 11111 0011111111
Q ss_pred HHHHHHh-hchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHH-HHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 291 FYVAISV-IGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFF-ALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 291 ~~~~~~~-~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+..+.. .+.......+..|.+|++.||++.|+.+...++++.+ +|.+.|.+.|+.| +...|++.++.++++++...
T Consensus 354 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 354 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHH
Confidence 1111111 1222223356779999999999999999999998765 7999999999999 88888888887777766654
Q ss_pred hc
Q psy6665 369 IF 370 (420)
Q Consensus 369 ~~ 370 (420)
.+
T Consensus 433 ~~ 434 (452)
T PRK11273 433 VV 434 (452)
T ss_pred HH
Confidence 33
No 24
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.6e-28 Score=229.31 Aligned_cols=333 Identities=16% Similarity=0.115 Sum_probs=221.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+++.++..++.++ |+++||+|||++++.+.++.+++.+++++. ++.+++.| ++
T Consensus 42 ~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l 109 (405)
T TIGR00891 42 FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIAR------------LV 109 (405)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 3667788888999999999999999 999999999999999999999999998887 88899999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----h--hHHHHHhHhhhccccccceeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----H--WRTVAWLSLAYILIPSPVWLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~--wr~~f~~~~~~~~~~~~~~l~~ 151 (420)
.|++.+ ...+...+++.|++|+++|+++.++.+.+..+|..+++.++..+ + ||+.|++.++..++........
T Consensus 110 ~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 188 (405)
T TIGR00891 110 IGIGMG-GEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNI 188 (405)
T ss_pred HHhhhh-hhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999 77777899999999999999999999999999999999887765 4 9999988766555441111112
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAV 231 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
+++++..++ .+. +....+...+...++...+...+.......+..+..+...........+... .......+.|
T Consensus 189 ~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 262 (405)
T TIGR00891 189 PEAEDWKEK-HAG----KALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANL-YSHPIQDLLP 262 (405)
T ss_pred CCChhHHHH-hhh----hhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHH-HHhhhhhhhH
Confidence 222111100 000 0000000000000000000000000011111011111111111222222111 2334556778
Q ss_pred HHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hhHHHHHHHHHHHHHHh
Q psy6665 232 QFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 232 ~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 297 (420)
.++.+. |+ ..+.+.......++.+++.++.+++.||++||+.+..+... .+...............
T Consensus 263 ~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (405)
T TIGR00891 263 TYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLV 342 (405)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 887654 77 66777888888999999999999999999999887655443 11111111112222333
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHH
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMV 352 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~ 352 (420)
.+..+....++.|.+|++.|++++|+.+...+++..++|.+.|.+.|+.|++...
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~ 397 (405)
T TIGR00891 343 QGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTA 397 (405)
T ss_pred ccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 3445566688899999999999999999999999999999999999998844433
No 25
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=8.5e-29 Score=228.80 Aligned_cols=321 Identities=12% Similarity=0.020 Sum_probs=223.2
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+++.++..+++++ |+++||+|||+++..+.++.+++.+.++++ ++.+++.| ++
T Consensus 33 ~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 100 (377)
T TIGR00890 33 FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY------------GL 100 (377)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH------------HH
Confidence 3667888899999999999999999 999999999999999999999999999888 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|++.+ ...+.....+.|++| ++|+++.++...+.++|..+++.+...+ +||+.|++.+++.++. .+.++..+
T Consensus 101 ~g~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 178 (377)
T TIGR00890 101 ASAGVG-IAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIG 178 (377)
T ss_pred HhHHHH-HHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhee
Confidence 999999 666657778899986 6799999999999999987655444433 7999999888776654 12222222
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+++++.. + ++ ++.++++.+.++.++ ++..+ ... ...+...........+.+.
T Consensus 179 ~~~~~~~-------~--------------~~-~~~~~~~~~~~~~~~-~~~~~-~~~----~~~~~~~~~~~~~~~~~~~ 230 (377)
T TIGR00890 179 YPPGQLI-------K--------------TN-IEVSVKDYTVWEMLR-TPQFW-VLY----LSFFLNAVSGLLLIGLYKP 230 (377)
T ss_pred cCchhcc-------c--------------cC-cccchhhhhHHHHHc-CccHH-HHH----HHHHHHhHHHHHHHHHHHH
Confidence 2111100 0 00 000001112223332 22211 111 1111111122334455566
Q ss_pred HHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hh-HHHHH-HHHHHHHHHhh
Q psy6665 233 FLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KS-LIPVF-CILFYVAISVI 298 (420)
Q Consensus 233 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~-~~~~~-~~~~~~~~~~~ 298 (420)
+.++.+. ..+.+.......+..++++++.+++.||++||+.+..+... .. ..... ...........
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 310 (377)
T TIGR00890 231 YGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWG 310 (377)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhc
Confidence 6666677 55667778888999999999999999999999887666544 11 11111 11111222222
Q ss_pred chhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 299 GMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 299 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
...+....+..|.+|+++|+++.|+.+....++..++|.+.|.+.++.| +...+.+.+++.+++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 311 GTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred cchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 2334455788899999999999999999999999999999999999988 8888877777666543
No 26
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=1.9e-28 Score=230.01 Aligned_cols=290 Identities=16% Similarity=0.225 Sum_probs=192.3
Q ss_pred HHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HH--------HHHhhccccccchhHHHHHHHHHHhhc
Q psy6665 16 VVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQ--------LIMTGQIEKSLIPVFCILFYVAISVIA 84 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~--------~~~~~r~~~~~~~~~~~~~l~G~~~~~ 84 (420)
.++..+++++ |+++||+|||++++.+.+++++++++++++ ++ .+++.| +++|++.+
T Consensus 66 ~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R------------~l~G~~~g- 132 (434)
T PRK15075 66 FLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGR------------LLQGFSAG- 132 (434)
T ss_pred HHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH------------HHhhcccc-
Confidence 3344578899 999999999999999999999999999988 54 468899 99999999
Q ss_pred ccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh------------hhhHHHHHhHhhhccccccceeeec
Q psy6665 85 MGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV------------LHWRTVAWLSLAYILIPSPVWLLNK 152 (420)
Q Consensus 85 ~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~------------~~wr~~f~~~~~~~~~~~~~~l~~~ 152 (420)
...+....++.|++|+++|++++++...+.++|..+++.++.. .|||++|++..+...+. ++ .+
T Consensus 133 ~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~---~~-~~ 208 (434)
T PRK15075 133 VELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFI---FL-IR 208 (434)
T ss_pred ccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH---HH-HH
Confidence 7676688999999999999999999888877776666655443 38999999865543322 11 11
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.+|.++..+ ++ ++.+.++..++..+ .++ .........+.+....+....|.|.
T Consensus 209 ~~~~e~~~~~~------------------~~--~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~p~ 263 (434)
T PRK15075 209 RSLEETEEFLA------------------RK--HRPSMREIFRSLAA----NWR-IVLAGMLMVAMTTVSFYLITVYTPT 263 (434)
T ss_pred HhcCCCHHHHH------------------hh--hccccccHHHHHHH----hHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111000000 00 00000111111111 111 1112122222233346678889999
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccch--------------h-HHHHHHHHHHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIEK--------------S-LIPVFCILFYVAI 295 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~--------------~-~~~~~~~~~~~~~ 295 (420)
|+++. |+ ..+.........++.+++.++.|+++||++||+.+..+..+. . .........+...
T Consensus 264 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (434)
T PRK15075 264 FGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSF 343 (434)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 99874 88 566677777788889999999999999999998876543320 0 0001111111112
Q ss_pred HhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHH-HHHHHHHHhHHHHHhcC
Q psy6665 296 SVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI-LMFFALQYYPWFKDSVG 347 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~~~~~~g~l~~~~g 347 (420)
+.....+..+.+..|.+|++.|+++.|+.+..... ++.++|.+.|++.|+.|
T Consensus 344 ~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 344 LYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 22223444557889999999999999997666654 58889999999999988
No 27
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=2.5e-29 Score=236.67 Aligned_cols=340 Identities=10% Similarity=0.096 Sum_probs=221.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHH-hhccccccchhHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIM-TGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~-~~r~~~~~~~~~~~~~ 76 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||++++.+.++.++++++++++ ++.++ ..| +
T Consensus 49 ~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~------------~ 116 (455)
T TIGR00892 49 FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG------------F 116 (455)
T ss_pred hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH------------H
Confidence 3567777888888888888999999 999999999999999999999999998887 66654 468 8
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccc-ceeee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSP-VWLLN 151 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~-~~l~~ 151 (420)
+.|++.+ ...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+ |||+.|++.+++.++... .++..
T Consensus 117 l~G~~~~-~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 117 ITGLGLA-FNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHhcch-hhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999 654557788899995 7899999999999999998888877665 899999999887654411 12222
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhH--HHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSAR--LIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
+.+.++.........+.+.+... ++ .+.....++..+. .+.++ ++.++......+......+....+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~~~ 263 (455)
T TIGR00892 195 PVGPSQRVSKSKSKEGLPPDGST--KK---LSKKSTAEKINRFLDFSLFT------HRGFLVYLSGNVIMFLGFFAPIIF 263 (455)
T ss_pred CCCcccccccccccccCCCCCcc--cc---ccccchhhhhhhhcchHHhc------CchHHHHHHHHHHHHHHccchHHH
Confidence 21111000000000000000000 00 0000000000010 11221 222222222222222334556678
Q ss_pred HHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc--CchhhHhh--hccc-----------hhHHHHHHHHHHH
Q psy6665 230 AVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY--GRRSLTMF--SQIE-----------KSLIPVFCILFYV 293 (420)
Q Consensus 230 ~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--g~~~~~~~--~~~~-----------~~~~~~~~~~~~~ 293 (420)
.|.|.++.|+ ..+.+......+++.++++++.+++.||. ++|+.... +... .+...+....+..
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~ 343 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFF 343 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 8888887788 77788888888999999999999999973 33322221 1111 2222222222232
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHH
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
+.......+...+++.|.+|+++++++.|+.+....++++++|.+.|.+.+..|++...+++.+++.+++.+
T Consensus 344 G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 344 GLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 222223355666888899999999999999999999999999999999999886577777777776665554
No 28
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=7.5e-28 Score=230.59 Aligned_cols=342 Identities=15% Similarity=0.115 Sum_probs=224.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+...++..++.++ |+++||+|||++++.+.++.+++.+++++. ++.+++.| ++
T Consensus 50 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l 117 (496)
T PRK03893 50 FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIAR------------LV 117 (496)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH------------HH
Confidence 3567777888889999999999999 999999999999999999999999998888 88899999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecC
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKG 153 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~ 153 (420)
.|++.+ ...+....++.|++|+++|++++++...+..+|..+++.+...+ +||+.|++..+..++. ++..+.
T Consensus 118 ~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~---~~~~~~ 193 (496)
T PRK03893 118 IGMGMA-GEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFA---LWLRKN 193 (496)
T ss_pred HHHHHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH---HHHHHh
Confidence 999999 66666889999999999999999999999999999999887765 8999998765544332 111111
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhh------hHHHHH-------------------------hhcc
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLS------ARLIKM-------------------------VTMA 202 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-------------------------~~~~ 202 (420)
.+++.+. ..+ .+......+. .+......++...... .....+ ....
T Consensus 194 ~p~~~~~-~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (496)
T PRK03893 194 LPEAEDW-KEK-HAGKAPVRTM-VDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSS 270 (496)
T ss_pred CCCchhh-hhh-ccccccchhH-HHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhc
Confidence 0000000 000 0000000000 0000000000000000 000000 0001
Q ss_pred ccchHHHHHHHHHHHHHhcchhhHHHhHHHHHH-hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc
Q psy6665 203 TGIKPLLVITVLFALQQLAGIYITIFYAVQFLE-DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE 280 (420)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 280 (420)
..+++.........+......+....+.|.+++ +.|+ ..+.+.......++.+++.++.|+++||++||+.+..+..+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 350 (496)
T PRK03893 271 GKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLI 350 (496)
T ss_pred ccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 111122222222222222222345678899986 4578 77888888989999999999999999999999887766543
Q ss_pred ------------hhHH-HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 281 ------------KSLI-PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 281 ------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
.... ......+...+...+..+...++..|.+|++.|++++|+.+....+++.++|.+.|.+.++.|
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 351 SQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 1111 111111222223334445556788899999999999999999999999999999999999998
Q ss_pred cchHHHHHHHHHHHH
Q psy6665 348 GSAMVQWFFALISVI 362 (420)
Q Consensus 348 ~~~~~~~~~~~~~~~ 362 (420)
+...+...++...+
T Consensus 431 -~~~~~~~~~~~~~~ 444 (496)
T PRK03893 431 -LGTALASLSFSLTF 444 (496)
T ss_pred -hHHHHHHHHHHHHH
Confidence 77666555544433
No 29
>KOG0255|consensus
Probab=99.97 E-value=1.3e-27 Score=229.68 Aligned_cols=355 Identities=18% Similarity=0.216 Sum_probs=253.5
Q ss_pred ccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHH
Q psy6665 4 RMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAI 80 (420)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~ 80 (420)
+........+++++|.++|+++ |+++||+|||++++.+.++..++.++.+++ ++.+++.| ++.|+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~R------------fl~G~ 183 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFR------------FLSGF 183 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH------------HHHHh
Confidence 3445667889999999999999 999999999999999999999999999999 99999999 99999
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh--hhHHHHHhHhhhcccc---------cccee
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL--HWRTVAWLSLAYILIP---------SPVWL 149 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~--~wr~~f~~~~~~~~~~---------~~~~l 149 (420)
+.+ ........++.|++++++|+.+..+ ......+..+++.++.++ +||+.+++..+++++. +|+|+
T Consensus 184 ~~~-~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl 261 (521)
T KOG0255|consen 184 FGS-GPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLLWFLPPESPRWL 261 (521)
T ss_pred hcc-chhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccCcChHHH
Confidence 999 5555599999999999999999999 666666666666666665 8999999988777644 89999
Q ss_pred eecCcHHHHHHHHHHHhcchh---hhhhhHHHH-hhhccchh-hhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchh
Q psy6665 150 LNKGRANQALKSLKYLARNYK---EVKNKEQEL-KKMNSTKE-NQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIY 224 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
..+++.+++.+.+++..+.+. +........ +.++.+.. .+++..+.+.++ .+..++..+...+.++ .+
T Consensus 262 ~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~l~~~~~~~~~~~~------~~ 334 (521)
T KOG0255|consen 262 LSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFR-TPRLRYRTLYLLFIWF------VF 334 (521)
T ss_pred HHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhc-CHHHHHHHHHHHHHHH------HH
Confidence 999999998888877755321 111111010 00111111 111233555554 4434555554444442 23
Q ss_pred hHHHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhH--HHHHHH
Q psy6665 225 ITIFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSL--IPVFCI 289 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~--~~~~~~ 289 (420)
...++...+... ++..+.+......+.....+....+...|+.|||.....+..+ ... ......
T Consensus 335 ~~~y~gl~~~~~-~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 335 SLVYYGLSLNVS-GLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred hHHHHhhhhhhh-hcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 334444333333 3455677777777778889999999999999999887777666 111 223333
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.+...+...++. ..+.+..|++|+..|..+.+..+....++++++|.+.-.... .. ....+.+++....+..+++.+
T Consensus 414 ~~~~~~~~~~~~-~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~-~~~~~~~~~~~~~l~~~~~~~ 490 (521)
T KOG0255|consen 414 LLGKFFIGSAFN-LIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MF-PLLGLILFGWLALLLGLLSLL 490 (521)
T ss_pred HHHHHHHHHHHH-HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc-ccchHHHHHHHHHHHHHHHHh
Confidence 333333344444 447999999999999999999999999999999998755444 33 234444467777777777778
Q ss_pred ccccCCCCChHHHH
Q psy6665 370 FLPETHGRTLLEIE 383 (420)
Q Consensus 370 ~~~~~~~~~~~~~~ 383 (420)
++||++++.+.+..
T Consensus 491 ~lpet~~~~l~~t~ 504 (521)
T KOG0255|consen 491 LLPETKGKPLPGTL 504 (521)
T ss_pred cCcccCCCCCchhH
Confidence 99999998875543
No 30
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=1.4e-28 Score=232.82 Aligned_cols=327 Identities=13% Similarity=0.078 Sum_probs=206.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.+++.++.++ |+++||+|||+++..+.++++++.++++++ ++.+++.| ++
T Consensus 66 ~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r------------~l 133 (476)
T PLN00028 66 LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVR------------FF 133 (476)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH------------HH
Confidence 3566777777888899999999999 999999999999999999999999888887 78888899 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh-------------hhhHHHHHhHhhhcccc
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV-------------LHWRTVAWLSLAYILIP 144 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~-------------~~wr~~f~~~~~~~~~~ 144 (420)
.|++.+ ...+ ...++.|++|+++|++++++.+...++|..+++.+... .+||+.|++.++++++.
T Consensus 134 ~G~~~~-~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~ 211 (476)
T PLN00028 134 IGFSLA-TFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIM 211 (476)
T ss_pred HHHHHH-hhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHH
Confidence 999998 5544 56789999999999999999887666666555433321 37999999988877655
Q ss_pred cc-ceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhh-hhhhhHHHHHhhccccchHHHHHHHHHHHHHhcc
Q psy6665 145 SP-VWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKEN-QSLSARLIKMVTMATGIKPLLVITVLFALQQLAG 222 (420)
Q Consensus 145 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (420)
.. .++..++++++.. . +.+ ++.+.++ +....+++.++ .++ .+...+..+.....
T Consensus 212 ~l~~~~~~~~~p~~~~---~--------------~~~-~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~ 267 (476)
T PLN00028 212 GILVLTLGQDLPDGNY---R--------------ELK-KSGTMPKDSFSKVLRYGVT-NYR-----TWILALTYGYSFGV 267 (476)
T ss_pred HHHHHHHcCcCCCCch---h--------------hHH-hcCccccccHHHHHHHHHc-Cch-----hHHHHHHHHHHHHH
Confidence 11 1222221111100 0 000 0000000 00111222222 111 12222222222222
Q ss_pred hhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchh-------hHhhhccc-----------hh
Q psy6665 223 IYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRS-------LTMFSQIE-----------KS 282 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-------~~~~~~~~-----------~~ 282 (420)
......+.|.++.+. |+ ..+++.......++.++++++.|+++||++||+ .......+ .+
T Consensus 268 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~ 347 (476)
T PLN00028 268 ELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANS 347 (476)
T ss_pred HHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccch
Confidence 344666788888665 88 677788888889999999999999999998652 11111111 11
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHH
Q psy6665 283 LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVI 362 (420)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 362 (420)
........+..........+..+++..+..| +.+|++.|+.+....+|+.++|.+.+ .+..+++...+.+.+++.++
T Consensus 348 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 348 LGAAIVVMILFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHH
Confidence 1111111111111111122334566667654 78999999998888888888776654 12223377788888877777
Q ss_pred HHHHhh
Q psy6665 363 SIVYVY 368 (420)
Q Consensus 363 ~~~~~~ 368 (420)
+.++.+
T Consensus 425 ~~~~~~ 430 (476)
T PLN00028 425 CTLPVA 430 (476)
T ss_pred HHHHHH
Confidence 766654
No 31
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=2.4e-28 Score=228.55 Aligned_cols=338 Identities=12% Similarity=-0.007 Sum_probs=232.4
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHH-----h--HHHHHhhccccccchhHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGY-----Y--TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~--~~~~~~~r~~~~~~~~~~~ 74 (420)
.+..+.....+.+.++..+++++ |+++||+|||+++..+..+.+++.+..+. . ++.+++.|
T Consensus 49 ~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------- 117 (417)
T PRK10489 49 GSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLG----------- 117 (417)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHH-----------
Confidence 35566788889999999999999 99999999999999988888777665542 2 67778889
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceee
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLL 150 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~ 150 (420)
++.|++.+ ...+...+++.|+.|+++|+++.++.....++|..+++.+++.+ +|++.|++.++..++.....+.
T Consensus 118 -~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (417)
T PRK10489 118 -LWDGFFGS-LGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLR 195 (417)
T ss_pred -HHHHHHHH-HHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 99999988 77776888999999999999999999999999999999888765 7999998877665544111111
Q ss_pred ecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhH
Q psy6665 151 NKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYA 230 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
.++..++ .+ ++.++.++.++.++..++ ++..+ .......+ ... ......+.
T Consensus 196 l~~~~~~--------------~~--------~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~---~~~--~~~~~~~~ 246 (417)
T PRK10489 196 LPALPPP--------------PQ--------PREHPLRSLLAGFRFLLA-SPVVG-GIALLGGL---LTM--ASAVRVLY 246 (417)
T ss_pred CCCCCCC--------------Cc--------ccccchHHHHHHHHHHHc-ChHHH-HHHHHHHH---HHH--HHhHHHhh
Confidence 1110000 00 000000001112222222 22111 11111111 111 23456678
Q ss_pred HHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhh
Q psy6665 231 VQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVI 298 (420)
Q Consensus 231 ~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 298 (420)
|.+.++ .|. +...+.......++.+++.++.+++.||.++++.+..+..+ .+............+...
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS 326 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 888888 477 66777888888899999999999999998777665554433 111112222222222222
Q ss_pred ch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCCC
Q psy6665 299 GM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHGR 377 (420)
Q Consensus 299 ~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (420)
+. .+...++..|..|++.||+++|+.+...+++..++|.+.|.+.+..| ....+...+++..+..++....+++++++
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVLGELRRF 405 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhccccccc
Confidence 22 34555788999999999999999999999999999999999999998 77788777777777777766777877766
Q ss_pred ChHHHH
Q psy6665 378 TLLEIE 383 (420)
Q Consensus 378 ~~~~~~ 383 (420)
+.+|.+
T Consensus 406 ~~~~~~ 411 (417)
T PRK10489 406 RQTPPE 411 (417)
T ss_pred cccccc
Confidence 655443
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.8e-27 Score=221.56 Aligned_cols=316 Identities=14% Similarity=0.076 Sum_probs=219.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----------HHHHHhhccccccc
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----------TQLIMTGQIEKSLI 69 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~r~~~~~~ 69 (420)
+|.+..+.....+.+.++..+++++ |+++||+|||++++.+.++.+++.+.+.++ ++.+++.|
T Consensus 46 ~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------ 119 (399)
T PRK05122 46 LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGR------ 119 (399)
T ss_pred cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHH------
Confidence 3567788889999999999999999 999999999999999999988877766543 34678899
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS 145 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~ 145 (420)
+++|++.+ ...+...+++.|++|+++|++++++.+.+..+|..+++.++..+ +||..+++..+..++.
T Consensus 120 ------~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~- 191 (399)
T PRK05122 120 ------LLLGIGES-LAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLG- 191 (399)
T ss_pred ------HHHHhhHH-hhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH-
Confidence 99999999 77777888999999999999999999988888888888877665 8999988777665543
Q ss_pred cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 146 PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
.++. +..+++. + + ++++.+.++.++ ..+.... ...+. ......
T Consensus 192 -~~~~-~~~~~~~--------------~--------~-----~~~~~~~~~~~~---~~~~~~~-~~~~~----~~~~~~ 234 (399)
T PRK05122 192 -LLLA-RPRPAVP--------------P--------V-----KGERLPFRRVLG---RVWPYGM-GLALA----SIGFGT 234 (399)
T ss_pred -HHHH-hcCCCCC--------------C--------C-----CccchhHHHHHH---HHHHHHH-HHHHH----HHHHHH
Confidence 1111 1100000 0 0 000011112111 1111111 11111 112334
Q ss_pred HHHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHH
Q psy6665 226 TIFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVA 294 (420)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 294 (420)
...+.+.++.+.|. .+.+.......++.+++.++.+++.||+++|+.+..+..+ .+........++.+
T Consensus 235 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 313 (399)
T PRK05122 235 IATFITLYYAARGW-DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTG 313 (399)
T ss_pred HHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 55677777766565 3344555677788899999999999999999877665443 12222222222222
Q ss_pred HHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.......+.......|..|++.|+++.|+.+....++..++|.+.|.+.+..| ++..+.+.+++++++.+...+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 314 FGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHH
Confidence 22222344445667788999999999999999999999999999999999988 888888888877777666543
No 33
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=2.4e-28 Score=229.57 Aligned_cols=348 Identities=11% Similarity=0.018 Sum_probs=228.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh------HHHHHhhccccccchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY------TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~ 74 (420)
|.+.++.....+++.++..++.++ |+++||+|||+++..+.++.+++.+++++. ++.+.+.|
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------- 125 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLL----------- 125 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHH-----------
Confidence 567778888999999999999999 999999999999999999999988877652 55667788
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh-----hhhHHHHHhHhhhcccc-ccce
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV-----LHWRTVAWLSLAYILIP-SPVW 148 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~-----~~wr~~f~~~~~~~~~~-~~~~ 148 (420)
++.|++.+ ...+.....+.|++|+++|++++++.+.+.++|..+++.+... .+||..|++.++++++. ...+
T Consensus 126 -~l~g~~~g-~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 126 -FLNGWFQG-MGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAF 203 (438)
T ss_pred -HHHHHHhh-cchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999 7666688899999999999999999999999988888765443 28999999988776654 2223
Q ss_pred eeecCcHHHHH-HHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHH
Q psy6665 149 LLNKGRANQAL-KSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITI 227 (420)
Q Consensus 149 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
+..++++++.. +...+.+++ .+ ++..++++.+.+.++.+. +...+.+.++......+......+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T TIGR00712 204 AMMRDTPQSCGLPPIEEYRND---YP--------DDYNEKAEQELTAKEIFM-QYVLPNKLLWYIAIANVFVYLLRYGVL 271 (438)
T ss_pred HhccCCHHhcCCCCchhcccc---cc--------cccccccccccchHHHHH-HHHccCchHHHHHHHHHHHHHHHHHHH
Confidence 33333322110 000000000 00 000000000001111111 011122223333222222333356677
Q ss_pred HhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchh-hHhhh-cc----c----------hhHHHHHHH
Q psy6665 228 FYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRS-LTMFS-QI----E----------KSLIPVFCI 289 (420)
Q Consensus 228 ~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~-~~----~----------~~~~~~~~~ 289 (420)
.|.|.|+++. |+ +.+.+.......+.++++.++.|+++||+++++ ..... .. . .+.......
T Consensus 272 ~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T TIGR00712 272 DWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMIC 351 (438)
T ss_pred HhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 8999999875 77 667777788888999999999999999995432 22111 00 0 011111111
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHH-HHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILM-FFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~-~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+..+....+..........|.+|++.|+++.|+.+...++++ .++|.+.|.+.|+.| +...+.+.+++.+++.+...
T Consensus 352 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 352 MIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred HHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHH
Confidence 1111111122222223467799999999999999999988875 689999999999998 88888888888877777777
Q ss_pred hccccCC
Q psy6665 369 IFLPETH 375 (420)
Q Consensus 369 ~~~~~~~ 375 (420)
...+|.|
T Consensus 431 ~~~~~~~ 437 (438)
T TIGR00712 431 VVMIGEK 437 (438)
T ss_pred HHHhhcc
Confidence 7777654
No 34
>PRK03699 putative transporter; Provisional
Probab=99.96 E-value=1.4e-27 Score=221.51 Aligned_cols=319 Identities=10% Similarity=0.009 Sum_probs=225.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.|.++.....+.+.++..++.++ |+++||+|||+++..+.++.+++.+++.++ ++.+++.| ++
T Consensus 37 ~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~------------~l 104 (394)
T PRK03699 37 FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAM------------FV 104 (394)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHH------------HH
Confidence 3567778888899999999999999 999999999999999999999999998887 88889999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~~~ 152 (420)
+|++.+ ...+....++.|++|+++|+++++..+....+|..++|.+...+ +||+.|.+.+++.++....++..+
T Consensus 105 ~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 183 (394)
T PRK03699 105 LGVVSG-ITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSE 183 (394)
T ss_pred HHHhhH-hhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999 77766889999999999999999998888888888888776543 899999988776655411111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
.+..+. + ++ +++ +.. . +.. +++.++......+......+.+..|.|.
T Consensus 184 ~p~~~~--------------~--------~~-~~~---~~~----~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 230 (394)
T PRK03699 184 FPALGK--------------H--------AP-KAD---KPV----A--KEK-WGIGVLFLAIAALLYILAQLTFISWVPE 230 (394)
T ss_pred Cccccc--------------c--------Cc-ccc---Ccc----c--ccc-CChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110000 0 00 000 000 0 111 1112222222222222335567789999
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhc
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIG 299 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 299 (420)
|+++. |+ ..+.+.......++..++.++.++++||+++|+.+.....+ .+........+..+....+
T Consensus 231 ~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 310 (394)
T PRK03699 231 YAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSA 310 (394)
T ss_pred HHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 99765 88 66778888888899999999999999999999887655443 1111222222222232333
Q ss_pred hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 300 MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 300 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
..+...++..|..|. .++...+.......+|..++|.+.|++.+..| +...++..+++.+++.+.+
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 311 IYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHH
Confidence 445555666676664 45777888999999999999999999999998 8888877777776665544
No 35
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.96 E-value=5.5e-27 Score=216.61 Aligned_cols=322 Identities=11% Similarity=0.062 Sum_probs=216.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+...++..+++++ |+++||+|||+++..+..+.+++.++++++ ++.+++.| ++
T Consensus 33 ~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r------------~l 100 (382)
T PRK10091 33 VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGR------------LV 100 (382)
T ss_pred cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH------------HH
Confidence 4667778888999999999999999 999999999999999999999999999988 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc-cceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS-PVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~-~~~l~~~ 152 (420)
.|++.+ ...+....++.|++|+++|++++++...+..+|..+++.++..+ +||+.|++.+++.++.. ..+...+
T Consensus 101 ~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp 179 (382)
T PRK10091 101 SGFPHG-AFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVP 179 (382)
T ss_pred HHhhhH-HHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 66666788899999999999999999999999999888877665 89999999887665541 1111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
+..++ ++ .+.++.. +.++ ++. .+...........+......|.+.
T Consensus 180 ~~~~~------------------------~~----~~~~~~~-~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 224 (382)
T PRK10091 180 DIRDE------------------------AK----GGLREQF-HFLR-SPA-----PWLIFAATMFGNAGVFAWFSYIKP 224 (382)
T ss_pred CCCcc------------------------cc----cCHHHHH-HHhc-ChH-----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11000 00 0000011 1111 111 111111111212223334455666
Q ss_pred HHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hhHHHHHHHHHHHHHHhh
Q psy6665 233 FLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KSLIPVFCILFYVAISVI 298 (420)
Q Consensus 233 ~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 298 (420)
++.+ .|. +.+.+.......++.+++.++.+++.||+++|+.+..+..+ +.................
T Consensus 225 ~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~ 304 (382)
T PRK10091 225 YMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLF 304 (382)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6665 477 67788888889999999999999999999998877655443 111111111111111111
Q ss_pred chh-hHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 299 GML-SIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 299 ~~~-~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
+.. +.......+..|.+.++.+ ..+....+|..++|.+.|.+.|..+++...+.+.++++.+.......+.+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 305 ALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred hhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 222 2222344455555555544 34677889999999999999997654878888777666666655544443
No 36
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=1.8e-28 Score=232.68 Aligned_cols=337 Identities=11% Similarity=0.021 Sum_probs=226.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----HHHHHhhccccccchhHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+.+..+.....+.+.+++.+++++ |+++||+|||+++..+.++++++.+++.++ ++.+++.| +
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~ 139 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCR------------V 139 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHH------------H
Confidence 456677788899999999999999 999999999999999999999998887554 67789999 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceee-
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLL- 150 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~- 150 (420)
++|++.+ ...+....++.||+|+++|++++++...+..+|..+++.+++.+ +||+.|++.++++++....|+.
T Consensus 140 ~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~ 218 (465)
T TIGR00894 140 IQGLAQG-SVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVF 218 (465)
T ss_pred HHHHhcc-cchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHH
Confidence 9999999 77777999999999999999999999999999999998887654 7999999988877655222221
Q ss_pred ecCcHHHHHHHHHHHhcchhhhhhhHHHHh--hhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHH
Q psy6665 151 NKGRANQALKSLKYLARNYKEVKNKEQELK--KMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIF 228 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
.++++++.. .. .+.+.+..+ .++.+++.+.+.++++.++ ++.++...+..+......+.+..
T Consensus 219 ~~~~p~~~~--------~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 282 (465)
T TIGR00894 219 PADDPSIHP--------CI--SKFEKKYINSSLQGQKGSTRQSLPIKAIPK------SLPVWAIWFAIFGHFWLYTILPT 282 (465)
T ss_pred hcCCcccCC--------CC--CHHHHHHHHhhcccccCCCCCCCCHHHHhc------CHHHHHHHHHHHHHHHHHHHHHH
Confidence 222111100 00 000000000 0000001111223444433 23344444444445545677888
Q ss_pred hHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhH--------h--hhcc-----c-------hhHH
Q psy6665 229 YAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLT--------M--FSQI-----E-------KSLI 284 (420)
Q Consensus 229 ~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~--------~--~~~~-----~-------~~~~ 284 (420)
|.|.|+++. |+ ..+.+.......++.+++.++.|+++||+++|+.. . .+.. . ....
T Consensus 283 ~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (465)
T TIGR00894 283 YLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFY 362 (465)
T ss_pred HHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchH
Confidence 999999775 77 67778888888999999999999999997644211 1 1100 0 0111
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc--CcchHHHHHHHHHHHH
Q psy6665 285 PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV--GGSAMVQWFFALISVI 362 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~ 362 (420)
..+...........+..+..+....|..|. .+|.+.|+.+..+.+++.++|.+.|.+.+.. +++...+.+.+++.++
T Consensus 363 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i 441 (465)
T TIGR00894 363 LTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNIL 441 (465)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHH
Confidence 111111111111112223333455577664 8999999999999999999999999987754 3356677777777777
Q ss_pred HHHHhh
Q psy6665 363 SIVYVY 368 (420)
Q Consensus 363 ~~~~~~ 368 (420)
+.++..
T Consensus 442 ~~i~~~ 447 (465)
T TIGR00894 442 CVIFYL 447 (465)
T ss_pred HHHHee
Confidence 665543
No 37
>KOG0252|consensus
Probab=99.96 E-value=1.3e-29 Score=222.09 Aligned_cols=363 Identities=17% Similarity=0.191 Sum_probs=245.7
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh---------HHHHHhhccccccchhHHHH
Q psy6665 6 NVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY---------TQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~~~~~~~~ 75 (420)
.....+-.+..+|.++|+++ |++.||+|||+++...++++.++++++++. ..++...|
T Consensus 84 ~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R------------ 151 (538)
T KOG0252|consen 84 GVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFR------------ 151 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHH------------
Confidence 34556677889999999999 999999999999999999999999988876 67889999
Q ss_pred HHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-------------------hhHHHHHh
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-------------------HWRTVAWL 136 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-------------------~wr~~f~~ 136 (420)
++.|+|.| .-+|...+..+|....++||...+...+.+++|.+.|..++..+ -||..+.+
T Consensus 152 ~~LGiGIG-GDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~gl 230 (538)
T KOG0252|consen 152 FLLGIGIG-GDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGL 230 (538)
T ss_pred HHhhcccc-CCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 99999999 66776899999999999999999998888888777776665544 39999999
Q ss_pred Hhhhcccc-ccceeeecCcHHHHHHHHHHHhcc-hhhhhhhHHHHhhhcc-chhhh-hhhhHHHHHh-hccccchHHHHH
Q psy6665 137 SLAYILIP-SPVWLLNKGRANQALKSLKYLARN-YKEVKNKEQELKKMNS-TKENQ-SLSARLIKMV-TMATGIKPLLVI 211 (420)
Q Consensus 137 ~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 211 (420)
.+++.++. .+++.....+.-++... ++.... ++.....+.+++.++. ....+ .+.+...+.+ +....-+.++-.
T Consensus 231 g~vpa~~~ly~Rl~M~Et~~Y~al~~-~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt 309 (538)
T KOG0252|consen 231 GAVPALLVLYFRLKMPETARYTALVS-KKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGT 309 (538)
T ss_pred HHHHHHHHHHhhhcCCcchhHHHHhh-cCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHH
Confidence 99988876 23332211111111000 000000 0000000000000000 00111 1111111211 111122344444
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHH---------HHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYL---------ATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE- 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~---------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~- 280 (420)
+..++.... .++....+...+++..|+ +.+... ...+.....++|-.+...++|++|||+..+.++.+
T Consensus 310 ~~~WFllDi-afy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~ 388 (538)
T KOG0252|consen 310 AGTWFLLDI-AFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIM 388 (538)
T ss_pred HHHHHhhhh-hhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHH
Confidence 444444443 467777778888887766 333222 11122222233445566789999999998888776
Q ss_pred -----------h----hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH-
Q psy6665 281 -----------K----SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD- 344 (420)
Q Consensus 281 -----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~- 344 (420)
+ .....++..+...+..+|.......+.+|.+|++.|+++.|+....+..|++++...+.++.+
T Consensus 389 ~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~ 468 (538)
T KOG0252|consen 389 TIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH 468 (538)
T ss_pred HHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc
Confidence 1 111233444555666777777777899999999999999999999999999999999999988
Q ss_pred ----hcCcchHHHHHHHHHHHHHHHHhhhccccCCCCChHHHHHH
Q psy6665 345 ----SVGGSAMVQWFFALISVISIVYVYIFLPETHGRTLLEIEEY 385 (420)
Q Consensus 345 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (420)
..| ....++++++++++..++. +++||+++++++|++++
T Consensus 469 ~yp~~~g-~~~v~~i~~~~~~~gi~~T-~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 469 NYPPNIG-VRNVFIILAGCMLLGILFT-LLIPETKGKSLEEISNE 511 (538)
T ss_pred cCCcccc-chHHHHHHHHHHHHhHhee-EEeecccccCHHHhcCh
Confidence 677 8899999999999998887 46779999999887443
No 38
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=215.35 Aligned_cols=317 Identities=13% Similarity=0.088 Sum_probs=218.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHH--------h--HHHHHhhccccccc
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGY--------Y--TQLIMTGQIEKSLI 69 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--------~--~~~~~~~r~~~~~~ 69 (420)
+|.|..+.....+.+.++..+++++ |+++||+|||++++.+.+...++.+.... . ++.+++.|
T Consensus 46 lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------ 119 (392)
T PRK12382 46 LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGR------ 119 (392)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHH------
Confidence 4678888999999999999999999 99999999999999998887766543221 1 67789999
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS 145 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~ 145 (420)
+++|++.+ ...+...+++.|++|+|+|++++++.+.+.++|..++|.++..+ +||..+.+..+..++.
T Consensus 120 ------~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~- 191 (392)
T PRK12382 120 ------LILGFGES-QLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA- 191 (392)
T ss_pred ------HHHHHHHH-HHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH-
Confidence 99999999 77776888999999999999999999999999998988887765 8998877665544332
Q ss_pred cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 146 PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
+...++.+++ + + ++ +++.+.++..+ ..+....... +. ......
T Consensus 192 --~~~~~~~~~~-----------~---~--------~~-----~~~~~~~~~~~---~~~~~~~~~~-l~----~~~~~~ 234 (392)
T PRK12382 192 --WAFNGTVRKV-----------P---A--------HA-----GERPSLWSVVG---LIWKPGLGLA-LQ----GVGFAV 234 (392)
T ss_pred --HHHHHhccCC-----------C---C--------Cc-----ccCchHHHHHH---HHHHhHHHHH-HH----HHHHhH
Confidence 1111100000 0 0 00 00001111111 1111111111 11 112334
Q ss_pred HHHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHH
Q psy6665 226 TIFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVA 294 (420)
Q Consensus 226 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 294 (420)
...+.|.++++.+.. ..+.......++.+++.++.|++.||+++|+.+..+..+ .+.........+.+
T Consensus 235 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 313 (392)
T PRK12382 235 IGTFVSLYFASKGWA-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTG 313 (392)
T ss_pred HHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 566777777776652 244455566777889999999999999998887765544 11111111112222
Q ss_pred HHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
.......+...+...|.+|+++|+++.|+.+....++..++|.+.|.+.++.| +...+.+.+++.+++.+..+..
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHhh
Confidence 21222344555677888999999999999999999999999999999999999 8888888888887777766543
No 39
>KOG2532|consensus
Probab=99.96 E-value=9.5e-28 Score=221.67 Aligned_cols=335 Identities=16% Similarity=0.163 Sum_probs=246.5
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----HHHHHhhccccccchhHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+.+.++-...++.++.|+++++++ |+++||+|-|+++..+.++.++++++...+ ++.+++.| +
T Consensus 69 ~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R------------~ 136 (466)
T KOG2532|consen 69 DWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLR------------F 136 (466)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHH------------H
Confidence 566778889999999999999999 999999999999999999999999999988 66789999 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceeee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLLN 151 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~~ 151 (420)
++|++.| ...+....+.++|.|++||++..++..++..+|.+++..+++.+ ||+.+|++.++.+++....|+..
T Consensus 137 lqGl~~g-~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 137 LQGLGQG-VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HhHHHHh-HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999999 88888999999999999999999999999999999888777766 89999999999998874444432
Q ss_pred cC-cHHHH----HHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhH
Q psy6665 152 KG-RANQA----LKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYIT 226 (420)
Q Consensus 152 ~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
.. ++++. +++++.+.+.. .+...+++.+.+++++++ .+.++...+..+....+.+.+
T Consensus 216 ~~d~P~~h~~is~~El~~I~~~k------------~~~~~~~~~~vP~~~i~t------s~~vwai~~~~f~~~~~~~~l 277 (466)
T KOG2532|consen 216 YSDSPSKHPNISEKELKYIEKGK------------SEAHVKKKPPVPYKAILT------SPPVWAIWISAFGGNWGFYLL 277 (466)
T ss_pred hcCCcccCCCCCHHHHHHHHhcc------------cccccCCCCCCCHHHHHc------CHHHHHHHHHHHHHHHHHHHH
Confidence 22 22211 01111111110 000111113456777765 556777777777777789999
Q ss_pred HHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch--------hhHh-hhccc--------------h
Q psy6665 227 IFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR--------SLTM-FSQIE--------------K 281 (420)
Q Consensus 227 ~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--------~~~~-~~~~~--------------~ 281 (420)
..|.|.|+++. |+ ..+.++...+..+...+..+++|.++||+.+| +..- ++... .
T Consensus 278 ~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~ 357 (466)
T KOG2532|consen 278 LTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEH 357 (466)
T ss_pred HHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCc
Confidence 99999999997 88 78888999999999999999999999998663 1111 11111 1
Q ss_pred hHHHHHHHHHHHHHHhhchhhHH-HHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh--cCcchHHHHHHHH
Q psy6665 282 SLIPVFCILFYVAISVIGMLSIP-WTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS--VGGSAMVQWFFAL 358 (420)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~--~g~~~~~~~~~~~ 358 (420)
.+..+.++.+. ....+..... +.-..+. -+++.+..+|+.+....+.++++|.+.|.+... ...|...|++.++
T Consensus 358 ~~~a~~~l~~~--~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~ 434 (466)
T KOG2532|consen 358 RLLAVILLTIA--IGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAG 434 (466)
T ss_pred chHHHHHHHHH--HHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHH
Confidence 11222222222 2222222222 2333333 447789999999999999999999999998842 1237788888888
Q ss_pred HHHHHHHHhhhc
Q psy6665 359 ISVISIVYVYIF 370 (420)
Q Consensus 359 ~~~~~~~~~~~~ 370 (420)
+.+++.++..++
T Consensus 435 i~~~~~i~f~~f 446 (466)
T KOG2532|consen 435 ILIVGNIIFLFF 446 (466)
T ss_pred HHHHhchheeEe
Confidence 888887654433
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.96 E-value=1.3e-26 Score=213.26 Aligned_cols=308 Identities=14% Similarity=0.094 Sum_probs=213.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-------HHHHHhhccccccchhHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-------TQLIMTGQIEKSLIPVFC 73 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~r~~~~~~~~~~ 73 (420)
+.+..+.....+++.++.+++.++ |+++||+|||++++.+.++.+++.++..+. ++.+++.|
T Consensus 30 ~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 99 (365)
T TIGR00900 30 TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLA---------- 99 (365)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH----------
Confidence 445667788889999999999999 999999999999999998888877766554 56778889
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc-cce
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS-PVW 148 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~-~~~ 148 (420)
++.|++.+ ...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+ +||+.|++.++..++.. ..+
T Consensus 100 --~l~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 100 --GILAIAQA-FFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred --HHHHHHHH-HHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 88887999999999999999999999999999999999888775 89999988776555431 111
Q ss_pred eeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHH-
Q psy6665 149 LLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITI- 227 (420)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 227 (420)
....++.++. + +.+. + .+..++.++..+..++ ++..+ ....... .... ......
T Consensus 177 ~~~~~~~~~~----------~-~~~~-------~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~---~~~~-~~~~~~~ 231 (365)
T TIGR00900 177 SVRIPELAAS----------E-IQAL-------S-NAVLRDTREGIKFVLK-NPLLR-TLLLLAL---LFNL-VFAPAIV 231 (365)
T ss_pred hcccccCCCc----------c-cccc-------c-hhHHHHHHhHHHHHHc-CcHHH-HHHHHHH---HHHH-HHHHHHH
Confidence 1111110000 0 0000 0 0000011122233332 22211 1111111 1111 122233
Q ss_pred HhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hh-HHHHHHHHHHH
Q psy6665 228 FYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KS-LIPVFCILFYV 293 (420)
Q Consensus 228 ~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~-~~~~~~~~~~~ 293 (420)
.+.|.+.++ .|. ..+.+.......++.+++.++.+++.||.+||+.+..+..+ .+ ........+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 677888876 377 66777888888999999999999999999999887765433 21 22222222222
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
+.......+...++..|.+|++.|+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222223356667889999999999999999999999999999999999998764
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=7.2e-26 Score=209.50 Aligned_cols=316 Identities=12% Similarity=0.086 Sum_probs=215.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||+++..+.++.+++.+++.+. ++.+++.| ++
T Consensus 50 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~l 117 (394)
T PRK10213 50 LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGR------------AC 117 (394)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHH------------HH
Confidence 4667788888889999999999999 999999999999999999999999998888 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccccee-eec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWL-LNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l-~~~ 152 (420)
+|++.+ ...+...+++.|++|+++|+++.++...+.++|..++|.++..+ +||+.|++.++++++.....+ ..+
T Consensus 118 ~G~~~g-~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p 196 (394)
T PRK10213 118 LGLALG-GFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLP 196 (394)
T ss_pred HHHhhH-HHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999 77777999999999999999999999999999999999888776 899999988776655310000 000
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhH-H
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYA-V 231 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 231 (420)
++++ + +++.+.+..+.++ ++ .++...+..+......+....+. |
T Consensus 197 ~~~~-------------------------~----~~~~~~~~~~~l~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~p 241 (394)
T PRK10213 197 SLPG-------------------------E----PSHQKQNTFRLLQ-RP-----GVMAGMIAIFMSFAGQFAFFTYIRP 241 (394)
T ss_pred CCCc-------------------------c----cccchhHHHHHhc-CH-----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000111222322 22 12222111122222233344454 6
Q ss_pred HHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhc
Q psy6665 232 QFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIG 299 (420)
Q Consensus 232 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 299 (420)
.+.++.|+ ..+.+......+++.+++.++.+++.||.+++......... .+........++.+.....
T Consensus 242 ~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~ 321 (394)
T PRK10213 242 VYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFAL 321 (394)
T ss_pred HHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHh
Confidence 66666688 66677878888899999999999999996555433322221 1111111122222211122
Q ss_pred hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 300 MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 300 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
..+...+++.+..| +.++...++.....+++..++|.+.|.+.|..| +...+...+.+.++..+.
T Consensus 322 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 322 VPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTALL 386 (394)
T ss_pred hhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHHHH
Confidence 23444456777777 446677788888889999999999999999988 666666655555444433
No 42
>TIGR00895 2A0115 benzoate transport.
Probab=99.96 E-value=1.4e-26 Score=215.65 Aligned_cols=321 Identities=13% Similarity=0.122 Sum_probs=213.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+..+.....+...++..++.++ |+++||+|||+++..+.++.+++.+++.+. ++.+++.| ++.
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 115 (398)
T TIGR00895 48 GLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILR------------FLA 115 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHH------------HHH
Confidence 556677778888999999999999 999999999999999999999998888877 88888999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecC
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKG 153 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~ 153 (420)
|++.+ ...+...+++.|++|+++|++++++...+..+|..+++.+++.+ +||..|++.++..++. ...+...++
T Consensus 116 g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 116 GLGLG-GLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred hcccc-cchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 99999 77777999999999999999999999999999999999888765 8999888775444333 111111111
Q ss_pred c--------HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhh-hhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchh
Q psy6665 154 R--------ANQALKSLKYLARNYKEVKNKEQELKKMNSTKEN-QSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIY 224 (420)
Q Consensus 154 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
+ .++..+..++........+ +.+.++.++++ ..+...+..+ ++...+... ...+..+.......
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~ 267 (398)
T TIGR00895 195 SIDFLVSKRPETVRRIVNAIAPQMQAEA----QSALPEQKATQGTKRSVFKALF--QGKTARITV-LLWLLYFMLLVGVY 267 (398)
T ss_pred CChHHHhcCHHHHHHHHHHHHHhccccc----cccccccccccchhhHHHHHHh--cchhHHHHH-HHHHHHHHHHHHHH
Confidence 1 1111111111100000000 00000000000 0111111222 111122222 22222223333455
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
....+.|.+.++.|. ..+.+.......++.+++.++.+++.||+++|+........ .+........+.
T Consensus 268 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (398)
T TIGR00895 268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAI 347 (398)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 667788877766677 66777888888999999999999999999998554333222 111112222222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWF 342 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l 342 (420)
.+.......+...++..|.+|++.|+++.|+.+....++..++|.+.|++
T Consensus 348 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 348 AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 22333334566678999999999999999999999999999999999875
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=1.2e-27 Score=221.16 Aligned_cols=325 Identities=13% Similarity=0.012 Sum_probs=217.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+...++..++.++ |+++||+|||+++..+.++.+++.+++.++ ++.+++.| ++
T Consensus 25 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 92 (379)
T TIGR00881 25 IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALW------------AL 92 (379)
T ss_pred hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHH------------HH
Confidence 3667788889999999999999999 999999999999999999999999999888 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHH-HHhhhh----hhHHHHHhHhhhcccc-ccceeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVY-ALGAVL----HWRTVAWLSLAYILIP-SPVWLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~-~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~ 151 (420)
.|++.+ ...+...+++.|++|+++|++++++.+.+..+|..+++ .++..+ +||+.|++.+++.++. ...++..
T Consensus 93 ~g~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T TIGR00881 93 NGIFQG-MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLL 171 (379)
T ss_pred HHhhcc-ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheee
Confidence 999999 77777999999999999999999999999999999998 344433 8999998887665543 1222333
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchh-hhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKE-NQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYA 230 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
++++++... ++.++..++..++. .++.+++ ++.+...+..++ ++ .++...+..+...........+.
T Consensus 172 ~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~ 239 (379)
T TIGR00881 172 RDSPQSCGL-----PPAEEMPNEEPDGD-AEKKEEELTKKQIFLQYVLL-NK-----VLWYISLGYVFVYVVRTGILDWS 239 (379)
T ss_pred CCCcccccc-----CccccCcccccccc-cccccccccchHHHHHHHHh-cc-----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211100 00000000000000 0000000 011111222222 22 22222222222222345677788
Q ss_pred HHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC-chhh-Hhhhccc--------------hhHHHHHHHHHH
Q psy6665 231 VQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG-RRSL-TMFSQIE--------------KSLIPVFCILFY 292 (420)
Q Consensus 231 ~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~-~~~~~~~--------------~~~~~~~~~~~~ 292 (420)
|.++++. |+ +.+.+.......++.+++.++.+++.||.. +|+. ....... .+........+.
T Consensus 240 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (379)
T TIGR00881 240 PLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFA 319 (379)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH
Confidence 8888765 77 677788888889999999999999999863 3322 1111100 111111122222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAM 351 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~ 351 (420)
.+....+..+....+..|.+|++.|+++.|+.+....+++.++|.+.|.+.|+.| +..
T Consensus 320 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 320 LGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred HHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-ccc
Confidence 2222333444555788999999999999999999999999999999999999988 543
No 44
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=6.2e-26 Score=209.62 Aligned_cols=317 Identities=10% Similarity=0.013 Sum_probs=219.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+.+.++..+++++ |+++||+|||+++..+.++.+++.++++++ ++.+++.| ++
T Consensus 36 ~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l 103 (381)
T PRK03633 36 EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWR------------FV 103 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 3667788999999999999999999 999999999999999999999999988887 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhhh---hHHHHHhHhhhccccccceeeecCc
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVLH---WRTVAWLSLAYILIPSPVWLLNKGR 154 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~---wr~~f~~~~~~~~~~~~~~l~~~~~ 154 (420)
+|++.+ ...+.....+.+..++++|++++++.+.+.++|..+++.++..+. ++...+..+.......+..+. +.+
T Consensus 104 ~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 181 (381)
T PRK03633 104 AGIGCA-MIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFT-RIL 181 (381)
T ss_pred HHHHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHh-ccc
Confidence 999999 766667777889999999999999999999999999999988761 111222222111111001100 000
Q ss_pred HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHH
Q psy6665 155 ANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFL 234 (420)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
++ + + + + +++.+..+.++ ++..+. ....+.. ..........+.|.+.
T Consensus 182 ~~--------------~-~--------~---~--~~~~~~~~~~~-~~~~~~-~~~~~~~----~~~~~~~~~~~lp~~~ 227 (381)
T PRK03633 182 NQ--------------Q-A--------E---N--HDSTSIWPMLK-LRQARL-GVNGCII----SGIVLGSLYGLMPLYL 227 (381)
T ss_pred CC--------------C-C--------C---C--CCCCCHHHHHH-hcchHH-HHHHHHH----HHHHHHHHHHHHHHHH
Confidence 00 0 0 0 0 00112233333 332221 1111111 1112334556788888
Q ss_pred HhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------hhHHHHHHHHHHHHHHhhchhhHHH
Q psy6665 235 EDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------KSLIPVFCILFYVAISVIGMLSIPW 305 (420)
Q Consensus 235 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
++.|. ....+.......+..+++++..+++.||+++|+.+..+... .............+.......|...
T Consensus 228 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~p~~~ 307 (381)
T PRK03633 228 NHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQAAMAPALFILGAAGFTLYPVAM 307 (381)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhHHHHHH
Confidence 87777 56677777888899999999999999999999887655444 1111111111222222334467777
Q ss_pred HHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 306 TMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 306 ~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
+...|..|+++++...+..+...++|+.++|.+.|++.|+.| +...|.+.+.+.++..+.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 308 AWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHH
Confidence 888899998888888888888899999999999999999998 778888777776655443
No 45
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=4.4e-26 Score=211.94 Aligned_cols=324 Identities=14% Similarity=0.097 Sum_probs=213.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHH---Hh---HHHHHhhccccccchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSG---YY---TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~---~~~~~~~r~~~~~~~~~~~ 74 (420)
|.+.++.....+.+.++..++.++ |+++||+|||+++..+..+.+++++++. +. ++.+++.|
T Consensus 44 g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------- 112 (402)
T TIGR00897 44 GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFY----------- 112 (402)
T ss_pred CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH-----------
Confidence 567788889999999999999999 9999999999999999999998877653 21 66777889
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHH-HHHHHHhhhh----hhHHHHHhHhhhcccc-ccce
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGM-VIVYALGAVL----HWRTVAWLSLAYILIP-SPVW 148 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~-~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~ 148 (420)
++.|++.+ ...+.....+.|++|+++|++++++.+.+.++|. .+++.+++.+ ||+..++.......+. ...+
T Consensus 113 -~i~G~g~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 190 (402)
T TIGR00897 113 -GIRGLGYP-LFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIAL 190 (402)
T ss_pred -HHHHcchH-HHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 99999988 6666577889999999999999999999999996 5788776543 6433332222111111 0011
Q ss_pred eeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHH
Q psy6665 149 LLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIF 228 (420)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+..+++.++.++ ++..+.++.++..++.++ ++ .++......+......+...+
T Consensus 191 ~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (402)
T TIGR00897 191 FSNKDIFTPQHM---------------------QTREKFSELGKAATILFT-NP-----NVLLGGMVRIINTIGLFGFAV 243 (402)
T ss_pred hccCCCCCcccc---------------------cCCcchhhHHHHHHHHHc-Ch-----hHHHHHHHHHHHHHHHHHHHH
Confidence 112221110000 000000000112223332 22 122222222233334566788
Q ss_pred hHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhh-hccc--------h--------hHHHHHHHH
Q psy6665 229 YAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMF-SQIE--------K--------SLIPVFCIL 290 (420)
Q Consensus 229 ~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~--------~--------~~~~~~~~~ 290 (420)
|.|.+.++.|+ ..+.+.......++..++.+..|+++||++||+.... +... . +........
T Consensus 244 ~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~ 323 (402)
T TIGR00897 244 FLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIA 323 (402)
T ss_pred HHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHH
Confidence 99999887788 6666777777889999999999999999998876531 1111 0 111111122
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
+..+....+..+. .....|..| ++|+++.|+.+....+++.++|.+.|.+.+..| +...+++.+++.+++.+...
T Consensus 324 ~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 324 IALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHH
Confidence 2222222223333 355567655 689999999999999999999999999999998 88888888888777776654
No 46
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=1.3e-26 Score=215.62 Aligned_cols=303 Identities=16% Similarity=0.169 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HH--------HHHhhccccccchhHHHHHHHHHH
Q psy6665 13 LVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQ--------LIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 13 ~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~--------~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
+..+++..+++++ |+++||+|||++++.+.++..++.++++++ ++ .+++.| +++|++
T Consensus 42 ~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r------------~l~G~~ 109 (394)
T TIGR00883 42 AAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLAR------------LIQGFS 109 (394)
T ss_pred HHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHH------------HHHHhh
Confidence 3445555678899 999999999999999999999999998887 33 478899 999999
Q ss_pred hhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh------------hhhHHHHHhHhhhcccccccee
Q psy6665 82 VIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV------------LHWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~------------~~wr~~f~~~~~~~~~~~~~~l 149 (420)
.+ ...+....++.|++|+++|++..++.+.+..+|..+++.++.. .+||+.|++.+++.++....+.
T Consensus 110 ~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 188 (394)
T TIGR00883 110 LG-GEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRR 188 (394)
T ss_pred cc-ccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHH
Confidence 99 6666689999999999999999999999999999998876532 3799999888776655411111
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..++++++..+ + +++++.+.+.++.++ ++ +++..... ...+......+....+
T Consensus 189 ~~~~~~~~~~~---------------------~--~~~~~~~~~~~~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 241 (394)
T TIGR00883 189 NLEETPVFEKA---------------------Q--EKHKKKRGPIRETLT-KH--RKPFLLGL-GLVIATTTTFYLITTY 241 (394)
T ss_pred hcCCChhHHHH---------------------H--hccccccCCHHHHHH-hc--hHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 11111110000 0 000011122333333 11 11122222 2222333335567778
Q ss_pred HHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhH-HHHHHHHHH
Q psy6665 230 AVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSL-IPVFCILFY 292 (420)
Q Consensus 230 ~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~-~~~~~~~~~ 292 (420)
.|.+.++. |. ..+.+.......+...++.++.++++||++||+.+.....+ ... .........
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 89988654 77 66677778888899999999999999999999876533222 011 111111222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHH-HHHHHHHHHHHHHhHHHHHhcCcchHHHHH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTF-CLAHILMFFALQYYPWFKDSVGGSAMVQWF 355 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~ 355 (420)
.........+...++..|.+|++.|+++.++.. ....++..++|.+.|.+.++.|.+...++.
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 222222345566789999999999999999854 445678889999999999998833333333
No 47
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.95 E-value=7.4e-27 Score=222.51 Aligned_cols=325 Identities=13% Similarity=0.081 Sum_probs=217.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++..+..+.+.++..++.++ |+++||+|||++++.+.++..+++++++++ ++.++++| ++
T Consensus 36 l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r------------~l 103 (495)
T PRK14995 36 LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATR------------AL 103 (495)
T ss_pred hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH------------HH
Confidence 4667788889999999999999999 999999999999999999999999999998 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhcc-CccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVA-RPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~ 151 (420)
+|+|.+ ...+.....+.+++ |+++|++++++......+|..++|.+++.+ +||+.|++...++++. ...++..
T Consensus 104 ~G~g~~-~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 104 LAIGAA-MIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred HHHHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999 66665677776765 679999999999999999999999998877 8999999887665554 1111111
Q ss_pred cCcHHHHHHHHH----------------HHhcchhhh-hhhHHHH-------hh-hccchhhhhhhhH--HHHHhhcccc
Q psy6665 152 KGRANQALKSLK----------------YLARNYKEV-KNKEQEL-------KK-MNSTKENQSLSAR--LIKMVTMATG 204 (420)
Q Consensus 152 ~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~-------~~-~~~~~~~~~~~~~--~~~~~~~~~~ 204 (420)
+++.++.++..+ ...+..... ....... .. .-...+.+.+.+. .+.++ +
T Consensus 183 ~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~-~--- 258 (495)
T PRK14995 183 PRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFT-H--- 258 (495)
T ss_pred CCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhC-C---
Confidence 111110000000 000000000 0000000 00 0000000011111 12222 1
Q ss_pred chHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--
Q psy6665 205 IKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-- 280 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-- 280 (420)
+.+.......+......+...++.|.+++.. |+ +.+++.......+...++.++.|++.||+|+|+.+..+..+
T Consensus 259 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~ 336 (495)
T PRK14995 259 --RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSA 336 (495)
T ss_pred --cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 2222222222223333556677889998876 88 88889999999999999999999999999999887665543
Q ss_pred ------------hhHHHHHHHHHHHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 281 ------------KSLIPVFCILFYVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 281 ------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
.+....... ....+.+.+. .+.......+..|++.++.+.++.+....+|+.+++.+.|.+.++
T Consensus 337 ~~~~~l~~~~~~~~~~~~~~~-~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 337 LSFYGLAMTDFSTQQWQAWGL-MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHhcCCCchHHHHHH-HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111112211 2222222222 334456677888999999999999999999999999999988764
No 48
>KOG0253|consensus
Probab=99.95 E-value=1.5e-26 Score=197.08 Aligned_cols=350 Identities=17% Similarity=0.188 Sum_probs=250.0
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhh
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~ 83 (420)
+........+.|..+++.. |.++|++|||+.+.+.....++...+.+.+ +..+++.| .+.|+|.|
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~------------~l~~~g~g 181 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFR------------ALWGFGVG 181 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHH------------HHHhccCC
Confidence 3445556678999999999 999999999999999999999999888888 99999999 99999999
Q ss_pred cccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc---------ccceee
Q psy6665 84 AMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP---------SPVWLL 150 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~---------~~~~l~ 150 (420)
..+. ..++-.|..|..+|...+-.. ..+.+|......+.... ||||..+..+.+..+. +|+|.+
T Consensus 182 -g~pv-~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~ 258 (528)
T KOG0253|consen 182 -GLPV-DSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYL 258 (528)
T ss_pred -CccH-hHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhh
Confidence 4444 778889999999998877766 88888888887776654 9999888777655444 999999
Q ss_pred ecCcHHHHHHHHHHHhcchhhh------------hhhHHHHhhhccch--hhhhhhhHHHHHhhccccchHHHHHHHHHH
Q psy6665 151 NKGRANQALKSLKYLARNYKEV------------KNKEQELKKMNSTK--ENQSLSARLIKMVTMATGIKPLLVITVLFA 216 (420)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (420)
.+++++++.+.++++.+.+... ++++++.+.++.+. .++.+.+..+++ .+++++..+.....++
T Consensus 259 ~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLl--sp~lrkttlllw~iwf 336 (528)
T KOG0253|consen 259 AKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLL--SPKLRKTTLLLWRIWF 336 (528)
T ss_pred hcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhc--ChHHHHHHHHHHHHHH
Confidence 9999999988888876533221 11111111111111 111122333333 5566666665555554
Q ss_pred HHHhcchhhHHHhHHHHHHhhC--------------------C-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHh
Q psy6665 217 LQQLAGIYITIFYAVQFLEDMG--------------------S-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTM 275 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g--------------------~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 275 (420)
...+. ++.........++... . ...-+.-.....+.++.|.++.+.+.||+|||+.+.
T Consensus 337 gnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMa 415 (528)
T KOG0253|consen 337 GNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMA 415 (528)
T ss_pred hhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHH
Confidence 43332 3444434444443321 1 122334556678899999999999999999999988
Q ss_pred hhccc------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHH
Q psy6665 276 FSQIE------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFK 343 (420)
Q Consensus 276 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~ 343 (420)
.++++ .........+..-.+.+ +...+.+.|..|++|+..|+++.|.++...++|+++.|++. . .
T Consensus 416 l~l~~f~iflfll~~c~~rn~~tvllf~arafis-g~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~-~ 492 (528)
T KOG0253|consen 416 LSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS-GAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-M-R 492 (528)
T ss_pred HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh-chheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-H-H
Confidence 87766 22222333333333333 44456689999999999999999999999999999999998 3 3
Q ss_pred HhcCcchHHHHHHHHHHHHHHHHhhhccccCCCCC
Q psy6665 344 DSVGGSAMVQWFFALISVISIVYVYIFLPETHGRT 378 (420)
Q Consensus 344 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (420)
.... ...+..+++.+++++.+.+.++--|+++|.
T Consensus 493 ~e~s-~sl~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 493 AELS-TSLPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hccc-eeehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 3333 578888999999999998888878888875
No 49
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.6e-25 Score=208.83 Aligned_cols=304 Identities=12% Similarity=-0.016 Sum_probs=203.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+.+.++..++.++ |+++||+|||+++..+..+.+++.+.+.++ ++.+++.| ++
T Consensus 43 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l 110 (406)
T PRK15402 43 FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR------------FL 110 (406)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH------------HH
Confidence 3566777788889999999999999 999999999999999999999999888877 88889999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
+|++.+ ...+....++.|++|+++|.+..++......+|..++|.++..+ +||+.|++.++..++. ...+...+
T Consensus 111 ~G~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK15402 111 QGIGLC-FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMP 189 (406)
T ss_pred HHhHhh-hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 76667889999999999999999998888888888888877665 8999999887776654 11111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.++. + ++ .+.++..++.++.++ ++.. +......+...........+.|.
T Consensus 190 ~~~~~~--------------~--------~~-~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~p~ 240 (406)
T PRK15402 190 ETAGRV--------------G--------EK-LSLKELGRDYKLVLK-NRRF-----VAGALALGLVSLPLLAWIALSPV 240 (406)
T ss_pred CCCccc--------------c--------cc-ccHHHHHHHHHHHHc-CcHH-----HHHHHHHHHHHHHHHHHHHHhHH
Confidence 111000 0 00 000001122233332 2221 11111111111123344556677
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h----hHHHHHHHHHHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K----SLIPVFCILFYVAI 295 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~ 295 (420)
++.+. |. +.+.+.......++.+++.++.+++.||+++|+.+..+... . .............+
T Consensus 241 ~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g 320 (406)
T PRK15402 241 ILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYA 320 (406)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHH
Confidence 76554 77 55566666666778889999999999999999887665443 0 00111111112222
Q ss_pred Hhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 296 SVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 296 ~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
.+.+. .+......... +++++|++.++.+....++..+++.+.+.+.+..+
T Consensus 321 ~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 321 FGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred HHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 22222 23333333333 44789999999999999999999999999988877
No 50
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=1.5e-25 Score=205.61 Aligned_cols=321 Identities=13% Similarity=0.153 Sum_probs=222.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHH------h-HHHHHhhccccccchhH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGY------Y-TQLIMTGQIEKSLIPVF 72 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~-~~~~~~~r~~~~~~~~~ 72 (420)
+|.+.++..+..++..+++.++.++ |++.||+|.|+++.++.++.++.++.+++ . ++.+++.|
T Consensus 65 ~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r--------- 135 (462)
T PRK15034 65 FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIA--------- 135 (462)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHH---------
Confidence 4678888999999999999999899 99999999999999999999999998886 3 88999999
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh----------------------hhh
Q psy6665 73 CILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV----------------------LHW 130 (420)
Q Consensus 73 ~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~----------------------~~w 130 (420)
++.|++ + ...+.....+++|+|+++||+++++.....++|..+++.+... .+|
T Consensus 136 ---~l~Gig-g-~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~ 210 (462)
T PRK15034 136 ---LLCGFA-G-ANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSL 210 (462)
T ss_pred ---HHHHHH-H-HhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHH
Confidence 999998 4 3445589999999999999999999976666666554443322 137
Q ss_pred HHHHHhHhhhcccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHH
Q psy6665 131 RTVAWLSLAYILIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLL 209 (420)
Q Consensus 131 r~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (420)
|..+++..++.++. ...|+..++.++ ++....+..+.+| + +..
T Consensus 211 ~~~~~~~~~~~iv~~i~~~~~~~~~~~------------------------------~~~~~~~~~~vlk-~-----~~~ 254 (462)
T PRK15034 211 ANAAWIWVPLLAIATIAAWSGMNDIAS------------------------------SRASIADQLPVLQ-R-----LHL 254 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccc------------------------------cccCHHHHHHHhC-C-----Cch
Confidence 77666666655443 112222111110 0000111222322 2 223
Q ss_pred HHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------
Q psy6665 210 VITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------- 280 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------- 280 (420)
+...+..+..+.++..+.++.|.+.++ .+ .........+..+...+.++++|+++||+|+++++..+...
T Consensus 255 Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 255 WLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 333333344444566678899999877 44 23333334455688889999999999999999988776653
Q ss_pred ----h----hHHHHHHHHHHHHHHhhch-hhHHHHHhcccCCh---------------------hhhhhhHHHHHHHHHH
Q psy6665 281 ----K----SLIPVFCILFYVAISVIGM-LSIPWTMTAEIFPL---------------------EIRGIAQGLTFCLAHI 330 (420)
Q Consensus 281 ----~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~---------------------~~r~~~~g~~~~~~~~ 330 (420)
. .........++..+...|. ....+-++.+++|+ ++-|.+.|+....+.+
T Consensus 334 ~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~ 413 (462)
T PRK15034 334 FLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAV 413 (462)
T ss_pred HHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHc
Confidence 0 1112222222222223333 22334677777774 1568899999999999
Q ss_pred HHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 331 LMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 331 ~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
|+++.|.+.|...+..|++...++.+.+..+++.++.+..+-
T Consensus 414 Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 414 GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998888899998888888888776553
No 51
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=2.1e-25 Score=204.04 Aligned_cols=299 Identities=21% Similarity=0.235 Sum_probs=240.0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+..+.....+...++..++.++ |+++||+|||+.+..+.++..++.+.+.+. ++.+++.| ++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l~ 97 (352)
T cd06174 30 GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGR------------FLL 97 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHH------------HHH
Confidence 456677888889999999999999 999999999999999999999999998887 88899999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecCc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKGR 154 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~~ 154 (420)
|++.+ ...+...+++.|++|+|+|++.+++......+|..+++.++..+ +||+.+++.++..++.......
T Consensus 98 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 172 (352)
T cd06174 98 GLGGG-ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLF---- 172 (352)
T ss_pred Hcccc-cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----
Confidence 99999 77787999999999999999999999999999999999888876 6999999888776664000000
Q ss_pred HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHH
Q psy6665 155 ANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFL 234 (420)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
.+ +..+......+...........+.|.+.
T Consensus 173 ----------------------------------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (352)
T cd06174 173 ----------------------------------------------LL----RLLLLLALAFFLLSFGYYGLLTYLPLYL 202 (352)
T ss_pred ----------------------------------------------HH----HHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 00 1122222333333444667788889998
Q ss_pred Hhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchh-hHhhhccc-----------hhHHHHHHHHHHHHHHhhch
Q psy6665 235 EDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRS-LTMFSQIE-----------KSLIPVFCILFYVAISVIGM 300 (420)
Q Consensus 235 ~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 300 (420)
++. |. ..+.+.......++..++.++.+++.||++||+ .+..+..+ .+..................
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 282 (352)
T cd06174 203 QEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFA 282 (352)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhcc
Confidence 886 77 777888889999999999999999999999998 77666554 22223333333333444445
Q ss_pred hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 301 LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 301 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+...++..|..|+++|++..|+.+....++..++|.+.+.+.+..+ +...+.+.+++.+++.+..+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 283 FPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLLL 349 (352)
T ss_pred chhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHhe
Confidence 67778999999999999999999999999999999999999999888 88888888888887776553
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=1.2e-25 Score=210.14 Aligned_cols=318 Identities=13% Similarity=0.076 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcc
Q psy6665 9 LATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAM 85 (420)
Q Consensus 9 ~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~ 85 (420)
....+++.++..++.++ |+++||+|||+++..+.++.+++.+++.+. ++.+++.| ++.|++.+ .
T Consensus 57 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~-~ 123 (408)
T PRK09874 57 GLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILR------------ALLGLLGG-F 123 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH------------HHHHHhhh-h
Confidence 56677888999999999 999999999999999999999998888777 88889999 99999866 6
Q ss_pred cchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecCcHHHHHH
Q psy6665 86 GPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKGRANQALK 160 (420)
Q Consensus 86 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~ 160 (420)
.. ....++.|++|+++|+++.++...+..+|..+++.+++.+ +||+.|++.+++.++. ...++..+++.++.+
T Consensus 124 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 201 (408)
T PRK09874 124 VP-NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVS- 201 (408)
T ss_pred HH-hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCccccc-
Confidence 54 4778899999999999999999999999999998888765 8999998888766554 111111111110000
Q ss_pred HHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC
Q psy6665 161 SLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS 239 (420)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~ 239 (420)
+ + ++.+..+..+.++ +++............. ........+.+.|..+. +.
T Consensus 202 ------------~--------~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 252 (408)
T PRK09874 202 ------------K--------K----EMLHMREVVTSLK-NPKLVLSLFVTTLIIQ----VATGSIAPILTLYVRELAGN 252 (408)
T ss_pred ------------c--------h----hhhHHHHHHHhCc-CCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhcc
Confidence 0 0 0000000111111 2222111111111111 11233445566666654 22
Q ss_pred cch----HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhHH
Q psy6665 240 RMN----VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSIP 304 (420)
Q Consensus 240 ~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 304 (420)
..+ .+......+++.+++.+..|++.||++||+.+..+... .+........+..+.......+..
T Consensus 253 ~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 253 VSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHH
Confidence 222 23444556677888899999999999999887766554 111222222222222222334555
Q ss_pred HHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 305 WTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 305 ~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
.+...+..|++.+|+.+++.+....+|..++|.+.|.+.+..| +...|.+.+++.+++.+..++..
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 333 QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 5777788898999999999999999999999999999999988 88899988888888777665433
No 53
>PRK10504 putative transporter; Provisional
Probab=99.95 E-value=2.4e-25 Score=211.79 Aligned_cols=325 Identities=13% Similarity=0.075 Sum_probs=213.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+..+.....+.+.++..++.++ |+++||+|||++++.+.++.+++.+++.++ ++.+++.| +++
T Consensus 41 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l~ 108 (471)
T PRK10504 41 GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLAR------------VLQ 108 (471)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHH------------HHH
Confidence 566677777888899999999999 999999999999999999999999888877 88889999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-------ccc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-------SPV 147 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-------~~~ 147 (420)
|++.+ ...+...+++.|++|+++|+++.++.....++|..++|.+++.+ +||+.|++......+. .|.
T Consensus 109 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 109 GVGGA-MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HhhhH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999 77777899999999999999999999999999999998888765 8999999876654443 111
Q ss_pred eeeecCcHHHHHHHHHH---------HhcchhhhhhhHHHH-------------hhhccchhhhhhhhHHHHHhhccccc
Q psy6665 148 WLLNKGRANQALKSLKY---------LARNYKEVKNKEQEL-------------KKMNSTKENQSLSARLIKMVTMATGI 205 (420)
Q Consensus 148 ~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (420)
....+.+.+........ ..+.+.......... ..++. +.+++..+. +.++ ++.++
T Consensus 188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~-~~~~~ 264 (471)
T PRK10504 188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR-NNNRALFSL-KLFR-TRTFS 264 (471)
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh-cCCCCccCH-HHhc-ccchH
Confidence 10011111111000000 000000000000000 00000 000001111 2222 22222
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--- 280 (420)
. .....+...........+.|.|++. .|. +.+.+.......+..+++.++.+++.||++||+.+..+..+
T Consensus 265 ~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 265 L-----GLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLAL 339 (471)
T ss_pred H-----HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHH
Confidence 1 1121222222344556678888875 477 66777777777888888889999999999999988766554
Q ss_pred ----------hhHHHHH-HHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 281 ----------KSLIPVF-CILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 281 ----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
..+.... ...+..+.......+....+..+..|++.++.++|+.++...+|..+++.+.|.+.+..|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 340 VSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1111111 111121111112234455777889999999999999999999999999999999988776
No 54
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=7.4e-26 Score=207.18 Aligned_cols=299 Identities=19% Similarity=0.210 Sum_probs=209.7
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.....+.+.++..++.++ |+++||+|||+++..+.++.+++.++..++ ++.+++.| ++
T Consensus 27 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l 94 (352)
T PF07690_consen 27 LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIAR------------FL 94 (352)
T ss_dssp STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH------------HH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhc------------cc
Confidence 3567788889999999999999999 999999999999999999999997776664 66999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccc--eeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPV--WLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~--~l~~ 151 (420)
.|++.+ ...+...+++.|++|+++|++++++.....++|..+++.+++.+ +||+.|++.+++.++.... ++..
T Consensus 95 ~g~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 95 LGIGSG-FFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHH-HHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred cccccc-cccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 999999 77777999999999999999999999999999999999998877 8999999998888776221 2221
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhh-HHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSA-RLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYA 230 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
+++.++.. +.+. ++.++++++..+ ++..++ ++..+ ..+....+. .........+.
T Consensus 174 ~~~~~~~~-----------~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~----~~~~~~~~~~~ 229 (352)
T PF07690_consen 174 EPPPPRER-----------ESPK-------ESESKKPKPLKPGFKSLFK-NPVLW-ILLIAFFLF----FFVFSGFSFFL 229 (352)
T ss_dssp --STTTT-------------SST-------TTT--HHHCCCH-CTHHHH-HHCCH-HHHHHHHHH----HHHHHHHHHHH
T ss_pred hccccccc-----------cccc-------ccccccccccccccccccc-cchhh-hhhhhhhHH----HHHHHHhhccc
Confidence 11111100 0000 000001111111 233332 22222 122222222 12245578888
Q ss_pred HHHHHhh-CCc--chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------h-hHHHHHHHHHHH
Q psy6665 231 VQFLEDM-GSR--MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------K-SLIPVFCILFYV 293 (420)
Q Consensus 231 ~~~~~~~-g~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~-~~~~~~~~~~~~ 293 (420)
|.|+.+. |.+ .+.+.......+...++.++.+++.||+++|+........ . +.........+.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLI 309 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 8885443 664 5666678888899999999999999999986655444333 1 122222223333
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHH
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFAL 336 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 336 (420)
+.......+....+..|..|++++|++.|+.+...++++.++|
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 310 GFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3333334677779999999999999999999999999999987
No 55
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.95 E-value=2.5e-26 Score=219.65 Aligned_cols=326 Identities=12% Similarity=0.103 Sum_probs=218.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+..+..+.+.++..++.++ |+++||+|||++++.+.++..++.++++++ ++.+++.| ++
T Consensus 32 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~ 99 (485)
T TIGR00711 32 LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFR------------VI 99 (485)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHH------------HH
Confidence 3566777888999999999999999 999999999999999999999999999888 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
+|++.+ ...+...+++.|++|+++|+++.+++..+..+|..+++.+++.+ +||+.|++.+.++++. ...++..+
T Consensus 100 ~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 178 (485)
T TIGR00711 100 QGFGGG-PLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILP 178 (485)
T ss_pred HHhhhh-hHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcC
Confidence 999999 77777999999999999999999999999999999999888776 8999998877665544 11111111
Q ss_pred CcHHHHHHHHHH----------------HhcchhhhhhhHHHHh-h---------hccchhhhhhhh--HHHHHhhcccc
Q psy6665 153 GRANQALKSLKY----------------LARNYKEVKNKEQELK-K---------MNSTKENQSLSA--RLIKMVTMATG 204 (420)
Q Consensus 153 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~--~~~~~~~~~~~ 204 (420)
++.++..+..+. ..+.+........+.. . ....++.+++++ ..+.++ ++.+
T Consensus 179 ~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 257 (485)
T TIGR00711 179 RDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFK-YRNF 257 (485)
T ss_pred CccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHc-CCCh
Confidence 111110000000 0000000000000000 0 000000000111 112222 2222
Q ss_pred chHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--
Q psy6665 205 IKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-- 280 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-- 280 (420)
+.. ....+......+...++.|.++++. |+ +.+.+.......++.+++.++.|++.||++||+.+..+..+
T Consensus 258 ~~~-----~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~ 332 (485)
T TIGR00711 258 TIG-----CVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYA 332 (485)
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Confidence 211 2222222223456677889999875 77 77888888888999999999999999999999887766544
Q ss_pred ------h-------hHHHHHHHHHHHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc
Q psy6665 281 ------K-------SLIPVFCILFYVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV 346 (420)
Q Consensus 281 ------~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 346 (420)
. +....... ....+++.+. .+.......+..|+++++++.|+.+....+|+.+++.+.+.+.++.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 333 VGFYWRAFTFTPDTPFLAIALP-QFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHhccCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11111111 1222222222 2233455667789999999999999999999999999999988753
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.95 E-value=4.7e-25 Score=203.76 Aligned_cols=319 Identities=14% Similarity=0.076 Sum_probs=211.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHH-hhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMF-SGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+|.+..+.....+.+.+...+.+++ |+++||+||||.++. +..+..++.++++++ ++.+++.| +
T Consensus 28 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~ 95 (375)
T TIGR00899 28 VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLG------------V 95 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHH------------H
Confidence 3567778888888888888888899 999999999887654 556666677777776 77888889 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhh--HhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-cccee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGAL--ICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWL 149 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~--~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l 149 (420)
+.|.+.+ ...+...++..|+.|+++|++. .+....+.++|..+++.+++.+ +||+.|++.++..++. ...++
T Consensus 96 ~~g~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 96 LLSSFAS-TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHhhhh-hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9988877 6666678888999888777654 5777777888888888877665 8999999988776554 11122
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..++.+++. + ++ +++.+.++.++ ++..+ .......+... .......+
T Consensus 175 ~~~~~~~~~--------------~--------~~-----~~~~~~~~~~~-~~~~~-~~~~~~~~~~~----~~~~~~~~ 221 (375)
T TIGR00899 175 FLPSYPRGA--------------P--------GA-----LTRLEVRGLLA-SRDTR-LLFVACTLMWG----CNILYIIN 221 (375)
T ss_pred hCCCcccCc--------------c--------cc-----cCcchhhhhhc-CcchH-HHHHHHHHHHH----HHHHHHhh
Confidence 122111000 0 00 00011112222 22221 11121111111 12334456
Q ss_pred HHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHH
Q psy6665 230 AVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAIS 296 (420)
Q Consensus 230 ~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 296 (420)
.|.++++. |. +.+.+..........+++.++.+++.||++||+.+..+... .+...........+..
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777554 77 55666666666677788889999999999999877665443 1122222222222222
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
.....+....+..|..|++ ++++.++.+...++|..++|.+.|.+.+..| +...+.+.+++.+++.+..
T Consensus 302 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHH
Confidence 2223455567888888864 6799999999999999999999999999988 8888888887777776655
No 57
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.95 E-value=3.3e-25 Score=205.52 Aligned_cols=300 Identities=14% Similarity=0.150 Sum_probs=206.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||+++..+.++.+++.+.+.+. ++.+++.| ++
T Consensus 35 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l 102 (385)
T TIGR00710 35 LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLR------------FV 102 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH------------HH
Confidence 3567778888999999999999999 999999999999999999999999988887 88899999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|++.+ ...+...+++.|++|+++|+++.++.+....+|..+++.+++.+ +||+.|++.++..++. ...++..+
T Consensus 103 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (385)
T TIGR00710 103 QAFGAS-AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILP 181 (385)
T ss_pred HHcchh-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 77777999999999999999999999999999999998888765 8999998877766554 11111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.++. ++ .+.++..++.++.++ ++..+... ...............+.|.
T Consensus 182 ~~~~~~-----------------------~~-~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 231 (385)
T TIGR00710 182 ETLPYE-----------------------AR-IQISTYFETFLLLLK-SKMFWGYA-----LIYGASFGGFFAFFSGAPF 231 (385)
T ss_pred CCCCCc-----------------------cc-CCHHHHHHHHHHHHc-CchhHHHH-----HHHHHHHHHHHHHHHcChH
Confidence 111000 00 000011112223332 22222111 1111122224455667787
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------h-----hHHHHHHH-HHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------K-----SLIPVFCI-LFYVA 294 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~-----~~~~~~~~-~~~~~ 294 (420)
++++. |. +.+.+.......++.+++.++.+++.||+++|+.+..+..+ . ........ ....+
T Consensus 232 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 311 (385)
T TIGR00710 232 VYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVG 311 (385)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHH
Confidence 77644 77 67777888888899999999999999999999876655433 0 11111111 11121
Q ss_pred HHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD 344 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~ 344 (420)
.......+.......|..| +.++++.++.+.....++.+.+.+.+.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~ 360 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2122234555577778877 568999999999988777766666664433
No 58
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.94 E-value=3.7e-25 Score=205.45 Aligned_cols=306 Identities=15% Similarity=0.183 Sum_probs=199.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+.++.....+.+.++..++.++ |+++||+|||+.++.+.++..++.+.+... ++.+++.| +++
T Consensus 34 ~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~------------~l~ 101 (392)
T PRK10473 34 NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGR------------FLQ 101 (392)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH------------HHH
Confidence 566777888889999999999999 999999999999999999999999988877 78888999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecC
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKG 153 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~ 153 (420)
|++.+ ...+....++.|++|+++|+++.++.+....+|..++|.++..+ +||+.|++.++..++. ...++..++
T Consensus 102 g~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 180 (392)
T PRK10473 102 GIGAG-CCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKE 180 (392)
T ss_pred Hhhhh-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999 77777899999999999999999999999999988888887665 8999998887766554 111111121
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
+.++. + + ++.+..+..++.++ ++..+........... .......+.|.+
T Consensus 181 ~~~~~--------------~--------~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 229 (392)
T PRK10473 181 TRPAR--------------A--------P---AASSKPRENSESLL-NRFFLSRLVITTLSVT-----VILTFVNTSPVL 229 (392)
T ss_pred CCCcc--------------c--------C---CccchHHHHHHHHh-CHHHHHHHHHHHHHHH-----HHHHHHHhCHHH
Confidence 11100 0 0 00000111122222 2222221221111111 122344555666
Q ss_pred HHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hhHHHHHHHHHHHHHHhhc
Q psy6665 234 LEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KSLIPVFCILFYVAISVIG 299 (420)
Q Consensus 234 ~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 299 (420)
+.+. |+ +.+.+.......++.+++.++.+++.||++||+.+..+..+ ..............+...+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554 77 55667777888899999999999999999999888766554 1111111111222222222
Q ss_pred hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHH
Q psy6665 300 MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFAL 358 (420)
Q Consensus 300 ~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~ 358 (420)
. ......+..|.+.|+ |.......++..+++.+.+++.++.| +.......+.
T Consensus 310 ~---~~~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 361 (392)
T PRK10473 310 F---GVAMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGI 361 (392)
T ss_pred h---HHHHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHH
Confidence 2 123334455554443 44455566777788888888888888 5443444333
No 59
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=8.1e-25 Score=202.25 Aligned_cols=296 Identities=12% Similarity=0.144 Sum_probs=198.3
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+.++.....+++.++..++.++ |+++||+|||+++..+.++.+++.+.+.+. ++.+++.| ++.
T Consensus 22 ~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------~l~ 89 (377)
T PRK11102 22 GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMR------------FLH 89 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH------------HHH
Confidence 567778888899999999999999 999999999999999999999999998887 88889999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecC
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKG 153 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~ 153 (420)
|++.+ ...+...+++.|++|+++|++++++.+....+|..+++.+++.+ +||+.|++.+++.++. ...++..++
T Consensus 90 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 90 GLAAA-AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999 77777899999999999999999999999999999999887765 8999998877766554 111111121
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
+.++.+ ++..+.++...+.++.++ ++. .+...........+......+.|.+
T Consensus 169 ~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (377)
T PRK11102 169 TLPKER----------------------RQPFHLRTTIRNFASLFR-HKR-----VLGYMLASGFSFAGMFSFLTAGPFV 220 (377)
T ss_pred cCcccc----------------------cCCCChHHHHHHHHHHHc-ChH-----HHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 111000 000000001112223332 221 1111122222222344555566766
Q ss_pred HHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------h-----hHHHHHHHHHHHHHH
Q psy6665 234 LEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------K-----SLIPVFCILFYVAIS 296 (420)
Q Consensus 234 ~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~-----~~~~~~~~~~~~~~~ 296 (420)
+.+. |+ +.+.+.......+..+++.++.+++.||+|+|+.+..+... . ...............
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 6554 77 77788888888999999999999999999999887765542 0 011111111111111
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHH-HHHHHHHHHh
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAH-ILMFFALQYY 339 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~~~~~~~~~~ 339 (420)
.....+.......|..| +.++++.++.+.... ++..+++.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122333456677766 788999998877654 4455555543
No 60
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.94 E-value=1.5e-24 Score=200.55 Aligned_cols=328 Identities=10% Similarity=-0.018 Sum_probs=211.3
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCILFYVAI 80 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~G~ 80 (420)
+.+.....+..+.+.+++.+..++ |+++||+|||++++.+.++.+++++.+.+... .++.| +++|+
T Consensus 34 ~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~-~~~~r------------~l~G~ 100 (393)
T PRK11195 34 HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIH-PLLAY------------GLVGI 100 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHH-HHHHH------------HHHHH
Confidence 445566778888999999999999 99999999999999999999998887766522 27789 99999
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhccccccceeeecCcHHH
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIPSPVWLLNKGRANQ 157 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~~~~~l~~~~~~~~ 157 (420)
+.+ ...+...+++.|++|+++|++++++.+....+|..+||.+++.+ .|+..+.+.+...++....+...++++++
T Consensus 101 ~~a-~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~ 179 (393)
T PRK11195 101 GAA-AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPHAEAALAVCALIYLLAALFNLFIPRLGAR 179 (393)
T ss_pred HHH-HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 999 88888999999999999999999999999999999999999887 45555555544322210011111111110
Q ss_pred HHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh
Q psy6665 158 ALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM 237 (420)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
.+ +.+ .+.. . ..++-++..+..++ ++..+. ......+... ......+..|.+.++.
T Consensus 180 ~~-------~~~-~~~~-------~---~~~~~~~~~~~l~~-~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (393)
T PRK11195 180 RP-------GQS-WNPI-------A---LLRDFFHACRVLWR-DKLGRF-SLAGTTLFWG----AGATLRFLVLAWAPVA 235 (393)
T ss_pred cc-------ccC-CCHH-------H---HHHHHHHHHHHHHh-CchhHH-HHHHHHHHHH----HHHHHHHHHHHHHHHH
Confidence 00 000 0000 0 00000112233333 332222 2222111111 1223344455555554
Q ss_pred -CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhch-hhHH
Q psy6665 238 -GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGM-LSIP 304 (420)
Q Consensus 238 -g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~ 304 (420)
|. +.+.+......+++.++++++.+++.||.++++.+..+... .+...... .....+...+. .+..
T Consensus 236 lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~G~~~g~~~~~~ 314 (393)
T PRK11195 236 LGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILMGLVVLLMALQHSLLPAYP-LLILIGALGGFFVVPM 314 (393)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHhhhhhhhhH
Confidence 77 77788888999999999999999999999888766655332 11111112 22122222222 3334
Q ss_pred HHHhcccCChhh-hhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 305 WTMTAEIFPLEI-RGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 305 ~~~~~~~~p~~~-r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
.+...+..|++. +|++.++.+...+++..++..+.+.+ +..| ....+.+.+...++...+.+.+
T Consensus 315 ~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 315 NALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHH
Confidence 566777766554 79999999999999999999998854 6777 6666666555555555554433
No 61
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1.6e-24 Score=201.03 Aligned_cols=319 Identities=12% Similarity=0.049 Sum_probs=210.4
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+........+...+...+..++ |+++||+|||+++..+.++.+++.+.+.+. ++.+++.| +++
T Consensus 42 g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l~ 109 (400)
T PRK11646 42 GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSC------------ILS 109 (400)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HHH
Confidence 556677777888888888888899 999999999999999999999999998887 88889999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhccccc-cceeeecCc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIPS-PVWLLNKGR 154 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~~-~~~l~~~~~ 154 (420)
|++.+ ...+...+++.|++|+++|++++++.....++|..++|.+++.+ +||+.|++.++..++.. ...+..+++
T Consensus 110 g~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 110 GLGGT-LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 99998 77777889999999999999999999999999999999888876 89999998877655431 011111110
Q ss_pred HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHH
Q psy6665 155 ANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFL 234 (420)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
.++ + ++++.++++++.++ ++..+. ....... . .........+.|.+.
T Consensus 189 ~~~------------------------~---~~~~~~~~~~~~~~-~~~~~~-~~~~~~~---~-~~~~~~~~~~~p~~~ 235 (400)
T PRK11646 189 KLS------------------------T---VRTPVREGMTRVLR-DKRFVT-YVLTLTG---Y-YMLAVQVMLMLPIMV 235 (400)
T ss_pred ccc------------------------c---cchhhHHHHHHHHc-CchHHH-HHHHHHH---H-HHHHHHHHHhhhhhH
Confidence 000 0 00001122333333 222221 1111111 1 111222445778888
Q ss_pred HhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhh-ccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchh
Q psy6665 235 EDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLR-TYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGML 301 (420)
Q Consensus 235 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 301 (420)
++.+. +.+.+.......+....+....+.+.| |++.++.+..+..+ ++...................
T Consensus 236 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~ 315 (400)
T PRK11646 236 NDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAE 315 (400)
T ss_pred HhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 87654 566666666666666655555555554 56655544444332 111111111111111122234
Q ss_pred hHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc---chHHHHHHHHHHHHHHHH
Q psy6665 302 SIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG---SAMVQWFFALISVISIVY 366 (420)
Q Consensus 302 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~~ 366 (420)
|...++..|..|++.||++.|+.+....++..++|.+.|.+.|+.++ ....+...++++++..+.
T Consensus 316 p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 316 PARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred ccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 55568888999999999999999999999999999999999998642 244555555555555443
No 62
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.8e-25 Score=194.46 Aligned_cols=323 Identities=15% Similarity=0.141 Sum_probs=238.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~ 74 (420)
+|.|.++..+..++..+...+.-++ |.+.||+|.|++..++.++..+-.+..+++ ++++++.+
T Consensus 44 ~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~g----------- 112 (417)
T COG2223 44 FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIG----------- 112 (417)
T ss_pred cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHH-----------
Confidence 4678888889999998888888899 999999999999999999999999999998 55999999
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh----hh---hHHHHHhHhhhcccc-cc
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV----LH---WRTVAWLSLAYILIP-SP 146 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~----~~---wr~~f~~~~~~~~~~-~~ 146 (420)
.+.|++.+ ...+ ...++++|+|||++|.++++.. ..|+|..+...+++. .+ ||....+..+..++. ..
T Consensus 113 -ll~G~~Ga-sFav-~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~ 188 (417)
T COG2223 113 -LLLGLAGA-SFAV-GMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVL 188 (417)
T ss_pred -HHHhcccc-eehc-ccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999988 7777 7889999999999999999998 777777665555544 47 998877777666654 22
Q ss_pred ceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhH
Q psy6665 147 VWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYIT 226 (420)
Q Consensus 147 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
.|+..++.++.. ...++.. +.+.+... +++-.|...+.++..+.++..+
T Consensus 189 ~~~~~~d~p~~r-----------------------~~~~~~~--~~~~~~v~------~~~~~W~lsllY~~tFG~Fvgf 237 (417)
T COG2223 189 AWLGMNDVPEHR-----------------------ASVKPQL--PAQLKAVF------SNKDTWLLSLLYFATFGGFVGF 237 (417)
T ss_pred HHHHhCCChhhh-----------------------ccccccc--hhHHHHHh------cCcchHHHHHHHHHHHHHHHHH
Confidence 333333322210 0000000 01122222 1223444445555556678889
Q ss_pred HHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------h-------h--HHH
Q psy6665 227 IFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------K-------S--LIP 285 (420)
Q Consensus 227 ~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~-------~--~~~ 285 (420)
..++|.|+++. +. +.+++.......+.+.+.++++|+++||+|.+|.+...+.. . . ...
T Consensus 238 s~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 238 SAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVF 317 (417)
T ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHH
Confidence 99999999987 77 77888888889999999999999999999988887666554 0 1 111
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHH
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
.........+.+.+-. ..+.++..++|. +-|.+.|+....+.+|++.-|...+...+.+|++...|+++..+.+++.+
T Consensus 318 ~~~~l~l~~~~G~GnG-svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v 395 (417)
T COG2223 318 VAVFLALFVFAGLGNG-SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALV 395 (417)
T ss_pred HHHHHHHHHHhccCcc-hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 2222222222333333 345777778775 56899999999999999999999999999999888899999998888888
Q ss_pred Hhhhcc
Q psy6665 366 YVYIFL 371 (420)
Q Consensus 366 ~~~~~~ 371 (420)
..+...
T Consensus 396 ~~~~~y 401 (417)
T COG2223 396 LTWALY 401 (417)
T ss_pred HHHHHH
Confidence 776544
No 63
>KOG1330|consensus
Probab=99.94 E-value=5.9e-28 Score=212.73 Aligned_cols=314 Identities=15% Similarity=0.040 Sum_probs=208.4
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
||.+.+...+..+++.+.+++.+|+ |+++|||+||+++.+|..++.++.++++++ ||+++++| .+
T Consensus 63 fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R------------~~ 130 (493)
T KOG1330|consen 63 FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCR------------GF 130 (493)
T ss_pred cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHH------------HH
Confidence 4677788888889999999999999 999999999999999999999999999999 99999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcccc-ccceeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIP-SPVWLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~-~~~~l~~ 151 (420)
.|+|.+ .+.+.++++++|.+|.++|++++++++.+...|..+|..++..+ .|||.|+..++++++. ....++.
T Consensus 131 vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~ 209 (493)
T KOG1330|consen 131 VGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFV 209 (493)
T ss_pred hccchh-hhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhc
Confidence 999999 88888999999999999999999999999999999988888776 5999999999888876 2222222
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHh--hccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMV--TMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
+++...+.+ +.. .+.+..++....++|... ..+.+....+-.....+ ....+..|
T Consensus 210 ~eP~rga~~---~~~---------------~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~f-----v~Gs~sww 266 (493)
T KOG1330|consen 210 REPERGARD---EVD---------------GENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQF-----VIGSLSWW 266 (493)
T ss_pred cCccccccc---ccc---------------cCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHH-----hccccchh
Confidence 222111100 000 000001111222333332 12222222222222222 23445556
Q ss_pred HHHHHHhh----CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch-------hhHhhhccc-----------------
Q psy6665 230 AVQFLEDM----GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR-------SLTMFSQIE----------------- 280 (420)
Q Consensus 230 ~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-------~~~~~~~~~----------------- 280 (420)
.|.+.... |+ ..+...+..+...++.+|.+++|.++||+.|+ +.-.+...+
T Consensus 267 ~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~ 346 (493)
T KOG1330|consen 267 APAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS 346 (493)
T ss_pred hhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh
Confidence 66655432 55 44566677788899999999999999995432 111111000
Q ss_pred hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHH-HHHHHhHHHHHhcCcch
Q psy6665 281 KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMF-FALQYYPWFKDSVGGSA 350 (420)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~-~~~~~~g~l~~~~g~~~ 350 (420)
......+.+.++.......-.....-+..|+.|++.|.++.++...+..+.+- -+|++.|.+.|+..++.
T Consensus 347 ~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 347 SSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 11111111111111111111222235667889999999999999988887665 45559999998765333
No 64
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.94 E-value=2.6e-24 Score=200.22 Aligned_cols=319 Identities=13% Similarity=0.079 Sum_probs=206.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
++.+.+.....++++.++..+++++ |+++||+|||++++.+.++++++++++.++ ++.+++.| ++
T Consensus 46 ~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r------------~l 113 (413)
T PRK15403 46 FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIAR------------FI 113 (413)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHH------------HH
Confidence 3567778888999999999999999 999999999999999999999999999888 88999999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccc-ceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSP-VWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~-~~l~~~ 152 (420)
+|++.+ ...+....++.|++|+++|++++++......+|..++|.+++.+ +||+.|++.++..++... .++..+
T Consensus 114 ~Gi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp 192 (413)
T PRK15403 114 QGTSIC-FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMP 192 (413)
T ss_pred HHHHHH-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 76666788899999999999999999999999999998888765 899999998877665411 111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.++. ++..+.++..+++++.++ + +.++...+.........+....+.|.
T Consensus 193 ~~~~~~-----------------------~~~~~~~~~~~~~~~ll~-~-----~~~~~~~l~~~~~~~~~~~~~~~~P~ 243 (413)
T PRK15403 193 ETVKRG-----------------------AVPFSAKSVLRDFRNVFR-N-----RLFLTGAATLSLSYIPMMSWVAVSPV 243 (413)
T ss_pred CCcccc-----------------------CCCCChHHHHHHHHHHHc-C-----HHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 110000 000000000112233332 2 22332322233333345566677898
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhh------Hhhhccc--------hhHHHHHHHHHHHHH
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT-YGRRSL------TMFSQIE--------KSLIPVFCILFYVAI 295 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~------~~~~~~~--------~~~~~~~~~~~~~~~ 295 (420)
++++. |+ +.+.+........+.+++..+.+.+.++ .++|.. ...+..+ .+............+
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~ 323 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYA 323 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 88876 77 6666777666777778877777776644 444432 1112111 111111111111111
Q ss_pred Hhhc-hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 296 SVIG-MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 296 ~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
.+.+ ..|......-+. ....+|++.++.+.....+..+++...+++.++ + ...++...++++.+..
T Consensus 324 ~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~~~~~~ 390 (413)
T PRK15403 324 FGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-G-GRLPFHLLAVVAGVIV 390 (413)
T ss_pred HHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-CchHHHHHHHHHHHHH
Confidence 1211 223333222111 222479999999999999999999999988777 4 4666666555554443
No 65
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=4.8e-24 Score=198.60 Aligned_cols=299 Identities=17% Similarity=0.135 Sum_probs=205.0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
|.+.++.....+++.++..++.++ |+++||+|||+++..+..+.+++.+++.+. ++.+++.| +++
T Consensus 37 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~l~ 104 (401)
T PRK11043 37 QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLR------------FVQ 104 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH------------HHH
Confidence 567778888999999999999999 999999999999999999999999888887 88899999 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecCc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKGR 154 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~~ 154 (420)
|++.+ ...+...+++.|++|++++++..+.......+|..++|.+++.+ +||+.|++.+++.++....++..+++
T Consensus 105 G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 105 AVGVC-SAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HhhhH-HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99988 66666788999999999999999998888888888888877665 89999988877766541111111111
Q ss_pred HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHH
Q psy6665 155 ANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFL 234 (420)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
.++. ++++++.++++.++ ++..+....... ...........+.|.+.
T Consensus 184 ~~~~---------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~ 230 (401)
T PRK11043 184 KKAR---------------------------KQSQDALTFKQLLK-SKTYLGNVLIFA-----ACSAAFFAWLTGSPFIL 230 (401)
T ss_pred CCcc---------------------------ccchHHHHHHHHHc-ChhHHHHHHHHH-----HHHHHHHHHHHHhHHHH
Confidence 0000 00001122333333 222221111111 11112345566788888
Q ss_pred HhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hhHHHHHHHHHHHHHHh
Q psy6665 235 EDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 235 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 297 (420)
++.|+ +.+.+.......++.+++.++.+++.||+++|+........ .............+...
T Consensus 231 ~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (401)
T PRK11043 231 EQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAAN 310 (401)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 77778 66667766777788889999999999999988754332221 11111111111222222
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
....+.......|..| +.++++.|+.+.....++..++.+.|.+.+...
T Consensus 311 ~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~ 359 (401)
T PRK11043 311 GAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPL 359 (401)
T ss_pred HHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh
Confidence 2334555556667766 579999999999999999999999998877543
No 66
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=3.3e-24 Score=198.47 Aligned_cols=321 Identities=8% Similarity=-0.011 Sum_probs=211.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+..+..+.+.++..+++++ |+++||+|||++++++.++..++.+...+. ++.+++.| ++
T Consensus 38 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 105 (395)
T PRK10054 38 YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFF------------AL 105 (395)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHH------------HH
Confidence 3667788889999999999999999 999999999999999999998888888777 77777788 88
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhcccc-ccceeeecC
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIP-SPVWLLNKG 153 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~-~~~~l~~~~ 153 (420)
.|.+.+ ...+....+..|..|+++|+++.++.....++|..++|.+++.+ +|+.+|++.++..++. ...++..++
T Consensus 106 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~ 184 (395)
T PRK10054 106 INCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQR 184 (395)
T ss_pred HHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 888877 66666889999999999999999999999999999999998876 8999999887666554 111111111
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
+.++. ++ + +++..+.++.++ ++..+.......+... . ......+.+.+
T Consensus 185 ~~~~~--------------~~-------~-----~~~~~~~~~~~~-~~~~~~~~~~~~l~~~-~----~~~~~~~~~~~ 232 (395)
T PRK10054 185 SEKAI--------------AT-------E-----TGSVWSPSVLLQ-DKALLWFTCSGFLASF-V----SGAFASCISQY 232 (395)
T ss_pred ccccc--------------cc-------c-----hhhhhhhhhhcc-CceehHHHHHHHHHHH-H----HHHhhhhHHHH
Confidence 10000 00 0 000011122222 2322222222111111 1 12222334444
Q ss_pred HH---hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHH-HHHHHHHHHHHh
Q psy6665 234 LE---DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIP-VFCILFYVAISV 297 (420)
Q Consensus 234 ~~---~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~~ 297 (420)
.. +.+. ....+.......+.........+.+.||.++|+.+..+..+ .+... +...........
T Consensus 233 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (395)
T PRK10054 233 VMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGE 312 (395)
T ss_pred HHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHH
Confidence 42 2244 33445555666666667778889999999999887666543 11111 111222222222
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
....|.....+.+..|++.++++.+..+ ...+|..++|.+.|.+.|+.| +...+++.+....+..++..
T Consensus 313 ~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 313 IIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHHH
Confidence 2224565678889999999999998765 677899999999999999998 77777666665555555443
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.93 E-value=4e-24 Score=195.78 Aligned_cols=301 Identities=13% Similarity=0.099 Sum_probs=203.7
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+.++.....+.+.++..++.++ |+++||+|||+++.++.++..++.+.+ .. .+.+++.| ++
T Consensus 30 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~------------~~ 96 (355)
T TIGR00896 30 LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT------------AL 96 (355)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH------------HH
Confidence 4677888899999999999999999 999999999999999999888888777 44 77888999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh------hhHHHHHhHhhhccccccceeee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL------HWRTVAWLSLAYILIPSPVWLLN 151 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~------~wr~~f~~~~~~~~~~~~~~l~~ 151 (420)
.|++.+ ...+....++.|++| ++|++++++.+.+.++|..+++.++..+ +||+.|...++..++....++
T Consensus 97 ~g~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~-- 172 (355)
T TIGR00896 97 IGVGIA-IINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWI-- 172 (355)
T ss_pred HHHHHH-HHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh--
Confidence 999999 666667788899886 6899999999999999998888776654 399988776655443311111
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAV 231 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
++..++ + + ++ ++..+...++.++ + +..+......+......+....|.|
T Consensus 173 ~~~~~~-----------~-~----------~~---~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~lp 221 (355)
T TIGR00896 173 PQVRRR-----------V-A----------AN---QTTTRLTPVRIWR-S-----PLAWQVTVFFGLQSGLYYSLIGWLP 221 (355)
T ss_pred hhhccc-----------c-C----------CC---CCCCCCCCchhhc-C-----HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 0 0 00 0000011122222 1 1122222222222223556677899
Q ss_pred HHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC-chhhHhhhccc----------hhHHHHHHHHHHHHHHhhc
Q psy6665 232 QFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG-RRSLTMFSQIE----------KSLIPVFCILFYVAISVIG 299 (420)
Q Consensus 232 ~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 299 (420)
.++++.|. ..+.+.......++.++++++.|++.||++ ||+.+..+..+ .............+.....
T Consensus 222 ~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~ 301 (355)
T TIGR00896 222 AILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLGLGQGG 301 (355)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Confidence 99988788 677788888899999999999999999994 55554443332 1111111111222222222
Q ss_pred hhhHHHHHhcc-cCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcc
Q psy6665 300 MLSIPWTMTAE-IFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGS 349 (420)
Q Consensus 300 ~~~~~~~~~~~-~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~ 349 (420)
..+...+...+ ..+++.++...++.+...+++..++|.+.|++.|+.|++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~ 352 (355)
T TIGR00896 302 AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNW 352 (355)
T ss_pred HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34444455544 445677799999999999999999999999999998844
No 68
>PRK10133 L-fucose transporter; Provisional
Probab=99.93 E-value=8.4e-24 Score=197.84 Aligned_cols=319 Identities=10% Similarity=0.007 Sum_probs=210.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHH---Hh--HHHHHhhccccccchhHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSG---YY--TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~--~~~~~~~r~~~~~~~~~~~ 74 (420)
+|.+..+.....+.+.+++.+++++ |+++||+|||+++..+.++++++.+++. ++ ++.++++|
T Consensus 56 ~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r----------- 124 (438)
T PRK10133 56 FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGL----------- 124 (438)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH-----------
Confidence 4677888899999999999999999 9999999999999999999999998863 34 88999999
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh---------------------------
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV--------------------------- 127 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~--------------------------- 127 (420)
+++|+|.+ ...+..+.++.|+.|+++|...+++.+..+.+|..+++.++..
T Consensus 125 -~l~G~g~g-~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~ 202 (438)
T PRK10133 125 -FIIAAGLG-CLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKH 202 (438)
T ss_pred -HHHHHHHH-HHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHH
Confidence 99999999 7777789999998877777778999999999999888877531
Q ss_pred ---hhhHHHHHhHh-hhccccccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccc
Q psy6665 128 ---LHWRTVAWLSL-AYILIPSPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMAT 203 (420)
Q Consensus 128 ---~~wr~~f~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (420)
.+||++|+... +..++.. .....+.++.+.+ .+ ++ +++.+...+.++.++ ++.
T Consensus 203 ~~~~~w~~~f~~~~~v~~~~~~-~~~~~~~p~~~~~------------~~--------~~-~~~~~~~~~~~~ll~-~~~ 259 (438)
T PRK10133 203 SLVLSVQTPYMIIVAIVLLVAL-LIMLTKFPALQSD------------NH--------SD-AKQGSFSASLSRLAR-IRH 259 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCCCcc------------cc--------cc-ccccchhhhHHHHHh-Cch
Confidence 25666665433 2222210 0000010000000 00 00 000000112233433 332
Q ss_pred cchHHHHHHHHHHHHHhcchhhHHHhHHHHH-Hhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc
Q psy6665 204 GIKPLLVITVLFALQQLAGIYITIFYAVQFL-EDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE 280 (420)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 280 (420)
.+. ..+.. +...........|.+.++ ++. |+ +.+.+.......++.++++++++++.||+++|+.+..+..+
T Consensus 260 ~~~-~~l~~----~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~ 334 (438)
T PRK10133 260 WRW-AVLAQ----FCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALI 334 (438)
T ss_pred HHH-HHHHH----HHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 222 11111 111122344556777774 443 77 77888889999999999999999999999999887666544
Q ss_pred -----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcc
Q psy6665 281 -----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGS 349 (420)
Q Consensus 281 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~ 349 (420)
...... ......+++.....|..++...|..|++ .+.+.++.. ....++.++|.+.|.+.|..|+.
T Consensus 335 ~~~~~~~~~~~~~~~~~-~~~~l~glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~ 411 (438)
T PRK10133 335 AMALCLISAFAGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNI 411 (438)
T ss_pred HHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHHHHHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccch
Confidence 111111 1222233333345677788888887754 677888776 45578889999999999987633
Q ss_pred hHHHHHHHHHHHHH
Q psy6665 350 AMVQWFFALISVIS 363 (420)
Q Consensus 350 ~~~~~~~~~~~~~~ 363 (420)
+..+++..+..+..
T Consensus 412 ~~~~~v~~~~~~~~ 425 (438)
T PRK10133 412 PTAELIPALCFAVI 425 (438)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555444433333
No 69
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.93 E-value=1.3e-23 Score=194.93 Aligned_cols=309 Identities=10% Similarity=-0.008 Sum_probs=210.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~ 74 (420)
+|.+..+.....+.+.+++.+++++ |++.||+|||++++.+.++++++.+++..+ ++.+++.|
T Consensus 33 ~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~----------- 101 (410)
T TIGR00885 33 FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGL----------- 101 (410)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH-----------
Confidence 4667788889999999999999999 999999999999999999999999886443 78889999
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh--------------------------
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-------------------------- 128 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-------------------------- 128 (420)
++.|+|.+ ...+..+.++.++.|+++|++.+++.+...++|..+++.++..+
T Consensus 102 -~l~G~g~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (410)
T TIGR00885 102 -FILTAGLG-FLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKH 179 (410)
T ss_pred -HHHHhhHH-HHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHH
Confidence 99999999 77777899999999999999999999999999999998876543
Q ss_pred ----hhHHHHHhHhhhccccccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhcccc
Q psy6665 129 ----HWRTVAWLSLAYILIPSPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATG 204 (420)
Q Consensus 129 ----~wr~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (420)
+||++|++.+++.++....+...+.+..+. + ++ ++.+.+++.++.++ ++..
T Consensus 180 ~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~--------------~--------~~--~~~~~~~~~~~~~~-~~~~ 234 (410)
T TIGR00885 180 SDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH--------------S--------DA--KQISFSASLSRLAR-IRHY 234 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------------c--------cc--ccccchhhHHHHHh-ChhH
Confidence 499999888876655411111111100000 0 00 00000112223333 2222
Q ss_pred chHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhC--C-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-
Q psy6665 205 IKPLLVITVLFALQQLAGIYITIFYAVQFLEDMG--S-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE- 280 (420)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~- 280 (420)
+. .....+++. ........|.+.|.++.+ . ...+............+|+++++++.||+++|+.+..+..+
T Consensus 235 ~~-~~l~~f~yv----g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~ 309 (410)
T TIGR00885 235 RE-GVIAQFFYV----GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIG 309 (410)
T ss_pred HH-HHHHHHHHH----HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 22 222222222 223345678888887643 2 22233344455577889999999999999999887665554
Q ss_pred ----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc----
Q psy6665 281 ----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV---- 346 (420)
Q Consensus 281 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~---- 346 (420)
.+..... .....+++.....|..++...+..+++.+..+.++.... +|+.+.|++.|.+.|..
T Consensus 310 ~~~~ll~~~~~~~~~~~-~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~ 386 (410)
T TIGR00885 310 MALCLGSIFAGGHVGLY-CLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAA 386 (410)
T ss_pred HHHHHHHHHcCChHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccc
Confidence 2222222 233333444455688889999999977665555555544 99999999999999964
Q ss_pred -CcchHHHHH
Q psy6665 347 -GGSAMVQWF 355 (420)
Q Consensus 347 -g~~~~~~~~ 355 (420)
|+....|++
T Consensus 387 ~~~~~~~~~~ 396 (410)
T TIGR00885 387 APAVNTSFIL 396 (410)
T ss_pred cCccchHHHH
Confidence 335555554
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=3.7e-23 Score=191.78 Aligned_cols=323 Identities=13% Similarity=0.066 Sum_probs=197.9
Q ss_pred CCCccchHHHHHHHH-HHHHHHHHHHHHHHHhhcchhHHH-HhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHH
Q psy6665 1 MGSRMNVYLATVLVG-VVRMVFGLLTSQLLRTYGRRSLTM-FSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~-~~g~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+|.|.++.....+.. .++..++.+.+.++||+||||.++ .+.++.+++.++.+++ ++.+++.+ .
T Consensus 46 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~ 113 (393)
T PRK15011 46 VHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVG------------V 113 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH------------H
Confidence 356667777776544 557777776644499999998754 5566666777666666 66665555 5
Q ss_pred HHHHHhhcccchhhhhhhhhccCccch--hhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-cccee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLR--GALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWL 149 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l 149 (420)
+.|...+ ...+....++.|+.++++| +...++.+.+.++|..++|.+++.+ |||..|++.++..++. .+.++
T Consensus 114 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 114 FLSSFGS-TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHH-hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 5554455 5556678888888876655 3455788888889999998888765 9999999888766554 12222
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..++..++.. ..+ + + .+ ...+ +++. .......... ..........+
T Consensus 193 ~~~~~~~~~~-----------~~~--------~----~---~~---~~~~-~~~~---~~~~~~~~~~-~~~~~~~~~~~ 238 (393)
T PRK15011 193 FLPSMRKELP-----------LAT--------G----T---LE---APRR-NRRD---TLLLFVICTL-MWGTNSLYIIN 238 (393)
T ss_pred hcCccCCCCc-----------ccc--------c----c---cc---cccc-cccc---HHHHHHHHHH-HHHHHHHHHHH
Confidence 2222111100 000 0 0 00 0000 1111 1111111111 11123445567
Q ss_pred HHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHH
Q psy6665 230 AVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAIS 296 (420)
Q Consensus 230 ~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 296 (420)
.|.++++. |+ +.+.+.......+..+++.++.|+++||++||+.+..+... ................
T Consensus 239 ~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 318 (393)
T PRK15011 239 MPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIY 318 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 88888664 77 55666666666777888999999999999999877654333 1111111111111111
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcccc
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
.....+....+..|.+|+ .++++.++.+...++|..++|.+.|.+.++.| +...+.+.+++.+++.+..+ ..||
T Consensus 319 ~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~-~~~~ 392 (393)
T PRK15011 319 IGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLL-RIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHH-hhcC
Confidence 111123344667888885 58999999999999999999999999999888 77777777766666665553 4443
No 71
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.93 E-value=9.8e-24 Score=197.58 Aligned_cols=341 Identities=11% Similarity=0.005 Sum_probs=197.7
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+|.+..+.....+++.++..+++++ |+++||+|||++++++..+.+++....... +..+...+ .+....+.
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 113 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYN-------ILLGAIVG 113 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHH
Confidence 3667788899999999999999999 999999999999988766665544322211 11111111 00000222
Q ss_pred HHHhhcccchhhhhhhhhccC--ccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhccccccceeeecC
Q psy6665 79 AISVIAMGPSPAIVYITEVAR--PDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIPSPVWLLNKG 153 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~~~~~l~~~~ 153 (420)
++..+ .........+.++.+ ++++++.++......++|..+++.+++.+ +|+.+|++.+++.++....++..++
T Consensus 114 ~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 114 GIYLG-FGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFNINPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HHHhh-hhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccc
Confidence 33222 222112222333332 34567788888888888999998888876 8999999888776554222222222
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
++++..+. ++ + + ++ ++++...++..+.++ ++..+...+....... .......+.|.+
T Consensus 193 ~~~~~~~~----~~-~---~--------~~-~~~~~~~~~~~~~l~-~~~~~~l~l~~~~~~~-----~~~~~~~~~~~~ 249 (420)
T PRK09528 193 DAPSTAKV----AN-A---L--------GA-NASAVSLKDALALLK-LPKFWFLVLYVIGVAC-----FYDVFDQQFPNF 249 (420)
T ss_pred cccchhhh----cc-c---h--------hc-ccccccHHHHHHHcc-CCCeEeehHHHHHHHH-----HHHHHHHHHHHH
Confidence 21111000 00 0 0 00 000001112223333 3333322221111111 112222334444
Q ss_pred HHhh----CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHh
Q psy6665 234 LEDM----GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 234 ~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 297 (420)
+.+. +. ....+.......+...++.++.|++.||+++|+.+..+..+ .+...+.......+...
T Consensus 250 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 329 (420)
T PRK09528 250 FASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEV 329 (420)
T ss_pred HHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 4332 33 34556777777888899999999999999999887665554 22222222222222111
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHH-HHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcccc
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGL-TFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
....+....+..|.+|++.+++..+. .+....+|..++|.+.|++.|..| +...+...+++.++..++.+...++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 330 PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11223344777888999999888766 577788999999999999999999 8888988888877777666555443
No 72
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.93 E-value=1.7e-23 Score=198.49 Aligned_cols=306 Identities=17% Similarity=0.166 Sum_probs=202.4
Q ss_pred HHHHH-HHHHHhh-----cchhH-HHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHHHHHHHhhcccch
Q psy6665 21 FGLLT-SQLLRTY-----GRRSL-TMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPS 88 (420)
Q Consensus 21 ~~~~~-g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~ 88 (420)
++.++ |+++||+ |||+. ++.+.++.+++..++++. ++.+.+.+ ++.|++.+ ...+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~------------~l~~~~~a-~~~i 126 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALA------------VVIAFCSA-SQDI 126 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH------------HHHHHHHH-HHHH
Confidence 56788 9999999 99885 667777777777777664 66777788 99999999 7778
Q ss_pred hhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceeeecCcHHHHHHHHH
Q psy6665 89 PAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLLNKGRANQALKSLK 163 (420)
Q Consensus 89 ~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 163 (420)
...+++.|++|+++|+++.++...+..+|.++++.++..+ |||..|++.+++.++.....+..+++.++.
T Consensus 127 ~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~----- 201 (491)
T PRK11010 127 VFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLAPEPTDTI----- 201 (491)
T ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc-----
Confidence 7999999999999999999999999999998888665543 899999998877665411111112211100
Q ss_pred HHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHh-hCC-cc
Q psy6665 164 YLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLED-MGS-RM 241 (420)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~ 241 (420)
+ ++.+.+++...++++.++ ++..+ .......+.. ........+.+.++.+ .|+ ..
T Consensus 202 ---------~--------~~~~~~~~~~~~l~~~~~-~~~~~-~~ll~~~l~~----~~~~~~~~~~~~~l~~~~G~s~~ 258 (491)
T PRK11010 202 ---------P--------VPKTLEQAVVAPLRDFFG-RNNAW-LILLLIVLYK----LGDAFAMSLTTTFLIRGVGFDAG 258 (491)
T ss_pred ---------c--------cccchhhhHHHHHHHHHc-CcCHH-HHHHHHHHHH----HHHHHHHHHHHHHHHHhcCCCHH
Confidence 0 000000001123344443 22211 1111111111 1223344556666644 488 66
Q ss_pred hHHHHH-HHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---h-----------hHHHHHH-HHHH-HHHHhhchhhHH
Q psy6665 242 NVYLAT-VLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---K-----------SLIPVFC-ILFY-VAISVIGMLSIP 304 (420)
Q Consensus 242 ~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---~-----------~~~~~~~-~~~~-~~~~~~~~~~~~ 304 (420)
+.+... ....++.+++.+++|+++||+++|+.+..+..+ . +....+. ..++ ....+.+. +..
T Consensus 259 ~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~-~~~ 337 (491)
T PRK11010 259 EVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGT-AAF 337 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH-HHH
Confidence 666665 455678999999999999999988776654432 0 0000111 1111 11122222 344
Q ss_pred HHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 305 WTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 305 ~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
+++..+..|++.+++..|+.+....++..+++.+.|.+.|..| +...|.+.+++++.+.+....
T Consensus 338 ~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 338 VALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 6788889999999999999999999999999999999999998 888888888888777666643
No 73
>KOG2533|consensus
Probab=99.92 E-value=7.3e-24 Score=196.32 Aligned_cols=327 Identities=13% Similarity=-0.001 Sum_probs=215.1
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
...++++...+++.++++++.++ |.|.||++-.+.+....+++++..++.... ++.+++.| ++.|
T Consensus 78 ~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr------------~llG 145 (495)
T KOG2533|consen 78 LVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALR------------FLLG 145 (495)
T ss_pred hhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH------------HHHH
Confidence 34567889999999999999999 999999998888888888888887666656 99999999 9999
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----------hhHHHHHhHhhhcccc-ccce
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----------HWRTVAWLSLAYILIP-SPVW 148 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----------~wr~~f~~~~~~~~~~-~~~~ 148 (420)
+.++ ...|....+++.|+.+++|++.++++.+..++|.++|++++..+ ||||.|++.++++++. ...+
T Consensus 146 l~es-~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 146 LFES-GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HHhc-ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999 77787999999999999999999999999999999999988772 8999999999988877 3344
Q ss_pred eeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHH
Q psy6665 149 LLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIF 228 (420)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (420)
+..++.++++. ...++ +.+...++.+ ++..+..+++.++.++. +.++.+.++...+..++.....+.+.+
T Consensus 225 ~~lp~~P~~~~-----fl~~~-ek~~~~~~~~-~~~~~~~~~~~~~~~~~---~a~~dp~vw~~~l~~~~~~lv~~~~~~ 294 (495)
T KOG2533|consen 225 FFLPDNPSKAW-----FLTDE-EKELVVERLR-ESPSGGIENKFKWKGFK---EALKDPGVWPFSLCYFFLKLVNYGFSY 294 (495)
T ss_pred EEecCChhhcc-----ccchH-HHHHHHHHHH-hccCCCcccccCHHHHH---HHHhchhHHHHHHHHHHHhhccccHHH
Confidence 44555444320 00000 0000000000 00001101112222222 233355556666666666656888999
Q ss_pred hHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc----cCchhhHhhhccc-----------hhHHHHHHHHH
Q psy6665 229 YAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT----YGRRSLTMFSQIE-----------KSLIPVFCILF 291 (420)
Q Consensus 229 ~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~-----------~~~~~~~~~~~ 291 (420)
|+|.++++. |+ ..++..+.....++++++.+++|+++|| ..+|........+ ..........+
T Consensus 295 ~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~ 374 (495)
T KOG2533|consen 295 WLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAF 374 (495)
T ss_pred HHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHH
Confidence 999999983 57 7788889999999999999999999999 4455444444333 10011111111
Q ss_pred HHHHHh-hchhhHHHHHhcccCChhh-hhhhHHHHHHHHHHHHHHHHHHhHH-HHHhcCcchHHH
Q psy6665 292 YVAISV-IGMLSIPWTMTAEIFPLEI-RGIAQGLTFCLAHILMFFALQYYPW-FKDSVGGSAMVQ 353 (420)
Q Consensus 292 ~~~~~~-~~~~~~~~~~~~~~~p~~~-r~~~~g~~~~~~~~~~~~~~~~~g~-l~~~~g~~~~~~ 353 (420)
+.+.+. ....+.......+....+. +-+..+........++.++|.+... ...+++ +...+
T Consensus 375 ~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~-~~~~f 438 (495)
T KOG2533|consen 375 LIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG-WGAVF 438 (495)
T ss_pred HhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh-hhhHH
Confidence 222221 1223444466666655444 3444555555566666666555432 233334 34444
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.92 E-value=3.2e-22 Score=184.81 Aligned_cols=317 Identities=12% Similarity=0.014 Sum_probs=210.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHH----HHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLT----MFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFC 73 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~ 73 (420)
+|.|..+.....+.+.+...+++++ |+++||+|||+.. ..+..+..+ ..+..+ ++.+++.|
T Consensus 34 ~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~---------- 101 (382)
T TIGR00902 34 IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAI---------- 101 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHH----------
Confidence 4678888999999999999999999 9999999985433 222222222 122233 88888899
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccccee
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l 149 (420)
+++|.+.+ ...+...++..|+ +++|++..+......++|..++|.+++.+ |||..|++......+....++
T Consensus 102 --~l~~~~~~-~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 176 (382)
T TIGR00902 102 --GLFALFFS-AGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLIGFL 176 (382)
T ss_pred --HHHHHHHc-cchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 99999998 6666677777664 47789999999999999999999887776 899998877654332211111
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..++.+++. +. + +++.++..+.++.++ ++. ++......+...........+
T Consensus 177 ~~~~~~~~~--------------~~-------~--~~~~~~~~~~~~~l~-~~~-----~~~~l~~~~l~~~~~~~~~~~ 227 (382)
T TIGR00902 177 IKPTIPPKD--------------AI-------P--EDESQGDSAFIALLK-NPM-----NLRFLAAVCLIQGAHAAYYGF 227 (382)
T ss_pred cCCCCCCCc--------------cc-------c--ccccccchhHHHHHc-ChH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 111100000 00 0 000011112333333 222 222222222222345567778
Q ss_pred HHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHh
Q psy6665 230 AVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 230 ~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 297 (420)
.|.++++.|. +...+.......+.++++.++.+++.||+++|+.+..+... ++...+.....+.+...
T Consensus 228 ~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~ 307 (382)
T TIGR00902 228 SAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTF 307 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHH
Confidence 8999888888 77788888888899999999999999999999998877776 22222222222322222
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHHHH-HHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLTFC-LAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~~~-~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
....+....++.+. |++.|+++.++++. ...+|..++|.+.|++.|+.| . ..++..+++.+++.++
T Consensus 308 ~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 308 AVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 23345556788888 99999999999874 566899999999999999998 4 6677777777665544
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.91 E-value=1.3e-22 Score=213.47 Aligned_cols=320 Identities=13% Similarity=0.005 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHHHHHHH
Q psy6665 8 YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
..+..+++.++.++++++ |+++||+|||++++.+.++..++.+++.++ ++.+++.| +++|++
T Consensus 49 ~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r------------~l~G~~ 116 (1146)
T PRK08633 49 TAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVT------------FLLGAQ 116 (1146)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH------------HHHHHH
Confidence 466678889999999999 999999999999999887766666554433 78899999 999999
Q ss_pred hhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-h------------hHHHHHhHhhhcc-ccccc
Q psy6665 82 VIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-H------------WRTVAWLSLAYIL-IPSPV 147 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-~------------wr~~f~~~~~~~~-~~~~~ 147 (420)
.+ ...+...+++.|++|+++|++++++...+.++|.++++.+++.+ . |++.+.+..+... +....
T Consensus 117 ~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1146)
T PRK08633 117 SA-IYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIF 195 (1146)
T ss_pred HH-hhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHH
Confidence 99 88888999999999999999999999999999999999888765 1 2333333222221 11001
Q ss_pred eeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHH
Q psy6665 148 WLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITI 227 (420)
Q Consensus 148 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
.+..++..++.. ...+ .............++.+++ ++. ++...+..+..........
T Consensus 196 ~~~~~~~~~~~~-----------~~~~------~~~~~~~~~~~~~~~~l~~-~~~-----~~~~~~~~~~~~~~~~~~~ 252 (1146)
T PRK08633 196 AYRLPKVPAAAP-----------EVFD------KKKYLFPKLLWRNLKLLRS-DRV-----LWLAIIGLSYFWFISQLAQ 252 (1146)
T ss_pred HhcCcCCCCCCc-----------cccc------ccccccHHHHHHHHHHHhc-CcH-----HHHHHHHHHHHHHHHHHHH
Confidence 111111100000 0000 0000000001122223322 221 1111111111111234456
Q ss_pred HhHHHHHHhh-CC-cc-hHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHH
Q psy6665 228 FYAVQFLEDM-GS-RM-NVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYV 293 (420)
Q Consensus 228 ~~~~~~~~~~-g~-~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~ 293 (420)
.+.|.++.+. |. .. ..+.......++.+++.++.+++.||+++++.+.++.++ .+....++..++.
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 6777777664 77 55 677888888899999999999999999988766555443 1111122222222
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC-cchHHHHHHHHHHHHHH
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG-GSAMVQWFFALISVISI 364 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~ 364 (420)
+.+.....+...+++.+..|++.||+++|+.+.+..++..+++.+.+.+.. .+ +....+.+.+.+.++..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHH
Confidence 222222344556888899999999999999999999999888877666544 33 13334444444444333
No 76
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.91 E-value=9.8e-22 Score=182.64 Aligned_cols=299 Identities=11% Similarity=0.018 Sum_probs=199.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.|.++.....+.+.++..++.++ |+++||+|||+++..+..+..++.+.+.+. ++.+++.| ++
T Consensus 38 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~ 105 (394)
T PRK11652 38 LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAAS------------AI 105 (394)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH------------HH
Confidence 3567788888999999999999999 999999999999999999999999988877 88899999 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeec
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNK 152 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~ 152 (420)
.|++.+ ...+....+..|++++++|+++.++.+.+..+|..++|.+++.+ +||+.|++.++..++. ...++..+
T Consensus 106 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 184 (394)
T PRK11652 106 QGLGTG-VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMP 184 (394)
T ss_pred HHhhhh-HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999998 66676788899999999999999999999999988888887765 8999999887665543 11111111
Q ss_pred CcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHH
Q psy6665 153 GRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQ 232 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (420)
++.++. + ++++.+.++++.++ ++..+... ... +...........+.+.
T Consensus 185 ~~~~~~-----------------------~---~~~~~~~~~~~~~~-~~~~~~~~-~~~----~~~~~~~~~~~~~~~~ 232 (394)
T PRK11652 185 ETRPAD-----------------------A---RRTRVLASYRTLLS-NRRFNCYL-LML----IGTLAGIAVFEACSGV 232 (394)
T ss_pred ccCccc-----------------------c---chhHHHHHHHHHHc-ChHHHHHH-HHH----HHHHHHHHHHHHhChH
Confidence 111000 0 00001222333332 22222111 111 1111123334455666
Q ss_pred HHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------h-----hHHHHHHHHHHHHHHh
Q psy6665 233 FLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------K-----SLIPVFCILFYVAISV 297 (420)
Q Consensus 233 ~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------~-----~~~~~~~~~~~~~~~~ 297 (420)
++++. |. +.+.+.......++.+++..+.+++.||.+++......... . .............+.+
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 77763 77 55666666777778888888889999988744332211111 0 0111111111112222
Q ss_pred h-chhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 298 I-GMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 298 ~-~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
. ...+...++..|.+| ++++++.++.+....+|+.+++.+.+.+.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~ 360 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 2 235666677788887 5689999999999999999999988876554
No 77
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.91 E-value=5.3e-22 Score=184.84 Aligned_cols=329 Identities=11% Similarity=0.018 Sum_probs=203.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcc-hhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGR-RSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
|.+..+.....+...++.++++++ |+++||+|| |+++.++.++.+++..+..+. ++.+++.| ++
T Consensus 34 g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~l 101 (418)
T TIGR00889 34 HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVL------------LA 101 (418)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH------------HH
Confidence 567788899999999999999999 999999965 778888888888887777766 77888889 88
Q ss_pred HHHHhhcccchhhhhhhh--------hccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccc
Q psy6665 78 VAISVIAMGPSPAIVYIT--------EVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPS 145 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~--------e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~ 145 (420)
.|++.+ ...+...+... |......|.+..+ .+|..+++.+++.+ .|+ +|++.++..++..
T Consensus 102 ~~~~~~-~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 102 NSLAYM-PTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHHHc-cHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 888776 55443444322 2233334444444 35566666666554 344 3445544444331
Q ss_pred cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 146 PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
...+..++.+++.+ + ++....+..+.+.++.++ ++.++......++... ....
T Consensus 174 ~~~~~~~e~~~~~~-----------~----------~~~~~~~~~~~~~~~~~k-~~~~~~~~~~~~~~~~-----~~~~ 226 (418)
T TIGR00889 174 VFALTLPDIPVAKS-----------T----------AKMSIKVMLGLDAFILFK-NKRMAIFFFFSMLLGA-----PLQI 226 (418)
T ss_pred HHHhcCCCCCCCcc-----------c----------cccCHHHHhhhhHHHHhc-CCCeeeHHHHHHHHHh-----HHHH
Confidence 11111111110000 0 000000000112223333 3333322222121111 1223
Q ss_pred HHHhHHHHHHhhCC-c--------chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------h--h-H-
Q psy6665 226 TIFYAVQFLEDMGS-R--------MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------K--S-L- 283 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------~--~-~- 283 (420)
...+.+.+.++.|. + ...+.......+..+++.+..++++||+|+|+.+..+.++ . . .
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 44566777766553 2 4457777888889999999999999999999998877665 0 0 1
Q ss_pred -HHHHH-HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHH-HHHHHHHHHHHHHhHHHHHhcCc-----chHHHHH
Q psy6665 284 -IPVFC-ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTF-CLAHILMFFALQYYPWFKDSVGG-----SAMVQWF 355 (420)
Q Consensus 284 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~-~~~~~~~~~~~~~~g~l~~~~g~-----~~~~~~~ 355 (420)
..... ..++.+.......+....++.|.+|++.|+++.|+.+ ....+|..++|.+.|.+.++.|+ |...|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 01111 1111222112234555678899999999999999997 56789999999999999998652 6678888
Q ss_pred HHHHHHHHHHHhhhccccCCCC
Q psy6665 356 FALISVISIVYVYIFLPETHGR 377 (420)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~ 377 (420)
.+++.++.++..+++.+|+++.
T Consensus 387 ~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHHHhCCcccC
Confidence 8888888888877788776443
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.91 E-value=1.8e-22 Score=211.69 Aligned_cols=321 Identities=11% Similarity=0.010 Sum_probs=205.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHH---hhHHHHHHHHHHHH-h-HHHHHhhccccccchhHHHHHHHHHH
Q psy6665 8 YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMF---SGLGMAVCMTTSGY-Y-TQLIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~-~-~~~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
..++.+++.+.+++.+++ |+++||+|||+++.. ..+...+..+.+.. . ++++++.| +++|++
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~------------~l~gi~ 121 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAAL------------FLMGIH 121 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH------------HHHHHH
Confidence 456677889999999999 999999999997643 22222222222223 2 88999999 999999
Q ss_pred hhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecCcHHH
Q psy6665 82 VIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKGRANQ 157 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~~~~~ 157 (420)
.+ ...+...+++.|++|+++|++++++.+++.++|.++||.+++.+ +|++.|+..++..++....++..+++.++
T Consensus 122 ~a-~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (1140)
T PRK06814 122 SA-LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNA 200 (1140)
T ss_pred HH-hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 99 88888999999999999999999999999999999999999887 89998854444433321111111111100
Q ss_pred HHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh
Q psy6665 158 ALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM 237 (420)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
.. ... .+....++....++...+ ++ .++...+..+........+..+.|.|+++.
T Consensus 201 ~~-----------~~~--------~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 255 (1140)
T PRK06814 201 AP-----------DLK--------IDRNIIRSTITLLKYAKA-DK-----RIWLAILGISWFWLVGAVVLSQLPLLAKET 255 (1140)
T ss_pred CC-----------CCe--------eccchHHHHHHHHHHHhc-Cc-----hHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 00 000 000000000112222222 22 222222222222222445667889998875
Q ss_pred -CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------h---------------------hH-H
Q psy6665 238 -GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------K---------------------SL-I 284 (420)
Q Consensus 238 -g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------~---------------------~~-~ 284 (420)
|. +...+......+++.+++.++.+++.|+..+++.+..+.++ . .. +
T Consensus 256 ~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 256 LGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccH
Confidence 77 77788888999999999999999999887665543332222 0 00 0
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 285 PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
.+.+..++.+.+.....+...+++.+..|++.+|+++|+.+....++..+++.+.+.+.+...++...+++.+.+.++.+
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 01111122222222234455688999999999999999999999999999999999987544325555555554444443
Q ss_pred HH
Q psy6665 365 VY 366 (420)
Q Consensus 365 ~~ 366 (420)
+.
T Consensus 416 ~~ 417 (1140)
T PRK06814 416 IL 417 (1140)
T ss_pred HH
Confidence 33
No 79
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.91 E-value=7.9e-22 Score=185.69 Aligned_cols=323 Identities=16% Similarity=0.080 Sum_probs=216.9
Q ss_pred ccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-------HHHHHhhccccccchhHHHH
Q psy6665 4 RMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-------TQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~~~r~~~~~~~~~~~~ 75 (420)
|......+.+...+-.++.+++ |.++||+.||++++.+.++.++..+..++. .+.+++.-
T Consensus 43 S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~------------ 110 (524)
T PF05977_consen 43 SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILT------------ 110 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHH------------
Confidence 4445566667778888888888 999999999999999998887766555433 56666777
Q ss_pred HHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeee
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLN 151 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~ 151 (420)
++.|++.+ +..+...+++.|..|+++...+.++.+...++..++||.+++.+ |-.+.|.+.++..++.....+..
T Consensus 111 fl~g~~~a-~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 111 FLLGIGSA-FFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred HHHHHHHH-HHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999 99999999999999999999999999999999999999888876 66777777665544430000000
Q ss_pred cCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHH
Q psy6665 152 KGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAV 231 (420)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
+.+.++. +.+. +.. .++-++.++...+ ++..+ ..+....+..+ ........+|
T Consensus 190 ~~~~~~~------------~~~~-------e~~--~~~l~~G~ryv~~-~~~l~-~~l~~~~~~~l----~~~a~~aLlP 242 (524)
T PF05977_consen 190 KPPPPPS------------SLPR-------ERF--FSALREGLRYVRS-SPPLR-SVLLRSFLFNL----FASAVWALLP 242 (524)
T ss_pred ccccccc------------ccch-------hhh--hhhHHHHHHHHhc-chHHH-HHHHHHHHHHH----hhhHHHHhhh
Confidence 1000000 0000 000 0001222222221 22222 22221111111 1233445678
Q ss_pred HHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhh
Q psy6665 232 QFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVI 298 (420)
Q Consensus 232 ~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 298 (420)
.+.++. |. +...+.+....+++.++|+++.+.+.+|+++++.+..+.+. .+.+......+..+....
T Consensus 243 l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~ 322 (524)
T PF05977_consen 243 LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWI 322 (524)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 887665 66 77778889999999999999999999999988776665554 222222222222222222
Q ss_pred chhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 299 GMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 299 ~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
.......+...+..|++.||++++++.+....+..+|..+.|.+.+..| ....+.+.++..+++.++.
T Consensus 323 ~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 323 IANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 3344455788899999999999999999999999999999999999999 7777766665555555544
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.91 E-value=5.2e-22 Score=184.50 Aligned_cols=329 Identities=12% Similarity=0.084 Sum_probs=200.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----------HHHHHhhccccccc
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----------TQLIMTGQIEKSLI 69 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~~~r~~~~~~ 69 (420)
+|.+..+.....+++.++..+++++ |+++||+|||+.++.+....+++....... ....++.+
T Consensus 33 ~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 106 (396)
T TIGR00882 33 NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGG------ 106 (396)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH------
Confidence 3567788888999999999999999 999999999999998777666544332211 22234456
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhcccccc
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIPSP 146 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~~~ 146 (420)
++.|++.+ ...+....+..|..+ +++...+......++|..+++.+++.+ +||.+|++.+++.++...
T Consensus 107 ------~~~g~~~~-~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 107 ------LYLGFVFS-AGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFSIDPQIVFWLGSGFALILML 177 (396)
T ss_pred ------HHHHHHhc-cchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHH
Confidence 78888888 666656666666532 334566777777788888888887765 899999988877766511
Q ss_pred ceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhH
Q psy6665 147 VWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYIT 226 (420)
Q Consensus 147 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (420)
.++..+++.++.++ .. + + .+.++++++.++..+.++ ++..+. ..... ... .......
T Consensus 178 ~~~~~~~~~~~~~~-~~---~----------~---~~~~~~~~~~~~~~~~l~-~~~~~~-~~l~~---~~~-~~~~~~~ 234 (396)
T TIGR00882 178 LLMFAKPKAPSSAT-VA---N----------A---LGANASAFSLKLALELFR-QRKFWM-FVLYV---VGV-ACVYDVF 234 (396)
T ss_pred HHHHhCCCCchhhh-hh---c----------c---cccccCCCCHHHHHHHHc-CCcHHH-HHHHH---HHH-HHHHHHH
Confidence 11111111111000 00 0 0 000001111223344443 332221 11111 111 1112233
Q ss_pred HHhHHHHHHhh----CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 227 IFYAVQFLEDM----GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 227 ~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
..+.+.|+++. +. ....+.......+...++.+..+++.||+++|+.+..+..+ .+........
T Consensus 235 ~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~ 314 (396)
T TIGR00882 235 DQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILK 314 (396)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHH
Confidence 33455555443 33 33456667777888889999999999999999988776654 1111111111
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHH-HHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGL-TFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~-~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
...+............+..+..|++.+++..+. .+....+|+.++|.+.|++.|..| +...|.+.+++.++..++..
T Consensus 315 ~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 315 MLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 111111111112233456667788888887766 678899999999999999999999 88999998888887777654
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.91 E-value=2.6e-22 Score=189.33 Aligned_cols=306 Identities=12% Similarity=0.091 Sum_probs=191.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHh----hcc-hhHHHHhhHHHHHHHHHHHHh--------HHHHHhhcccc
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRT----YGR-RSLTMFSGLGMAVCMTTSGYY--------TQLIMTGQIEK 66 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~--------~~~~~~~r~~~ 66 (420)
+|.+........++..+..++..++ |+++|| +|| |+.++.+....+++.+++... ...+++.+
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--- 106 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITY--- 106 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHH---
Confidence 3667788889999999999999999 999997 787 456777888888777766543 12334444
Q ss_pred ccchhHHHHHHHHHHhhcccchhhhhhhhhcc-CccchhhhHhHHHHHHHHHHHHHHHHhh-----------hhhhHHHH
Q psy6665 67 SLIPVFCILFYVAISVIAMGPSPAIVYITEVA-RPDLRGALICIGPSITSLGMVIVYALGA-----------VLHWRTVA 134 (420)
Q Consensus 67 ~~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~-----------~~~wr~~f 134 (420)
++.+++.+ ...++..++..|.. ++++|++..++.+.+..+|..+++.+.. ..+||+.+
T Consensus 107 ---------~~~~~~~~-~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~ 176 (437)
T TIGR00792 107 ---------ILLGLFYS-FVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFA 176 (437)
T ss_pred ---------HHHHHHHH-hhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHH
Confidence 88888888 66666788899987 4688999999988888887666544322 22799999
Q ss_pred HhHhhhcccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHH
Q psy6665 135 WLSLAYILIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITV 213 (420)
Q Consensus 135 ~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (420)
++.+++.++. ...++..+++.++. + ++.+++.+.++..+..++ ++.++. ..
T Consensus 177 ~i~~~l~~~~~~~~~~~~~e~~~~~--------------~--------~~~~~~~~~~~~~~~l~~-~~~~~~-----~~ 228 (437)
T TIGR00792 177 LVLALIGVVSLIICFFGTKERYSEI--------------P--------KNIEKKLSLKQIFKALFK-NDQLLI-----LC 228 (437)
T ss_pred HHHHHHHHHHHHHHHcCCEecCCCC--------------C--------cccccCCCHHHHHHHHhC-CHHHHH-----HH
Confidence 8888777665 11122222211100 0 000000011122233332 222211 11
Q ss_pred HHHHHHhcchhhHHHhHHHHHHhh-CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h
Q psy6665 214 LFALQQLAGIYITIFYAVQFLEDM-GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K 281 (420)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~ 281 (420)
...+...........+.+.+.+.. +.+...+.......+..+++.++.++++||+|+|+.+..+..+ .
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 229 LAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc
Confidence 111111112233333344444432 3233445556667888999999999999999999988777554 1
Q ss_pred -hHHHHHHHHHHHHHHhhchhhHHHHHhcccCC-------hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 282 -SLIPVFCILFYVAISVIGMLSIPWTMTAEIFP-------LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 282 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
+...........+.......+..+++.+|..| ++.+|.+.|+.+....++..+++.+.|.+.+..|
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 11111111122222222235566678888765 4567999999999999999999999999998877
No 82
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.91 E-value=2.1e-21 Score=179.37 Aligned_cols=316 Identities=16% Similarity=0.044 Sum_probs=197.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcch----hHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRR----SLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFC 73 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~ 73 (420)
+|.|..+.....+++.++..+++++ |+++||+||| +.+.++..+.. ....... ++.+++.|
T Consensus 34 ~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~i~~---------- 101 (382)
T PRK11128 34 QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA--VAFWFGAHSFWLLFVAI---------- 101 (382)
T ss_pred cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH--HHHHHhcccHHHHHHHH----------
Confidence 3667888999999999999999999 9999999994 33332222221 1222222 77888899
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccccee
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l 149 (420)
++.|++.+ ...+...+++.++ +++|+++.+......++|..++|.+++.+ |||..|++.++..++.....+
T Consensus 102 --~l~g~~~~-~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~ 176 (382)
T PRK11128 102 --GLFNLFFS-PLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL 176 (382)
T ss_pred --HHHHHHHc-ccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH
Confidence 99999988 6666677777776 45688888888888889999999888876 899999877754433211111
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..+++.++ + + ++ ++.++...++++.++ ++..+..... ..+.. ........+
T Consensus 177 ~~~~~~~~-------------~-~--------~~-~~~~~~~~~~~~i~~-~~~~~~~~~~----~~l~~-~~~~~~~~~ 227 (382)
T PRK11128 177 LRPTIMPQ-------------G-E--------SR-QQESAGWPAWKALLK-EPTVWRFLLC----VSLLQ-GSHAAYYGF 227 (382)
T ss_pred ccCCCCCc-------------c-c--------cc-cccccccchHHHHHc-ChhHHHHHHH----HHHHH-HHhHhHHHH
Confidence 11110000 0 0 00 000011223444443 3222221111 11111 123445667
Q ss_pred HHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHh
Q psy6665 230 AVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 230 ~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 297 (420)
.|.+.++.|. ..+.+.......+..++..++.+++.||+++|+.+..+... ++........+.. +..
T Consensus 228 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-g~~ 306 (382)
T PRK11128 228 SAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILH-CGT 306 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-HHH
Confidence 7888877787 66677777788888999999999999999999987766555 2222222222221 222
Q ss_pred hc-hhhHHHHHhcccCChhhhhhhHHHHHHH-HHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 298 IG-MLSIPWTMTAEIFPLEIRGIAQGLTFCL-AHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 298 ~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~-~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
.+ ..+....+..+. +++++++..++.+.. ..+|..++|.+.|.+.|..| . ..++..+++.+++.++
T Consensus 307 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 307 FTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 22 234444666676 556678888888744 45677899999999999998 4 4566666555554443
No 83
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.90 E-value=1e-22 Score=187.48 Aligned_cols=296 Identities=15% Similarity=0.152 Sum_probs=187.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh---HHHHHhhccccccchhHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY---TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+|.|..+..+..+.+.++.+++.++ |+++||+|||++++.+.++..++.++++++ ++.+++.| +
T Consensus 32 ~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~------------~ 99 (366)
T TIGR00886 32 LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLR------------L 99 (366)
T ss_pred hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH------------H
Confidence 4667788889999999999999999 999999999999999999999999888776 67788899 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh--------------hhhHHHH-HhHhhhc
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV--------------LHWRTVA-WLSLAYI 141 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~--------------~~wr~~f-~~~~~~~ 141 (420)
++|++.+ ...+ ...++.|++|+++|+++.++.....++|..+++.++.. .+||+.| +..+++.
T Consensus 100 ~~g~~~~-~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 100 FIGIAGG-SFAS-CMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HHHHhch-hhHh-HHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 9999976 6655 78899999999999999999986666666655544432 2699998 4333333
Q ss_pred ccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHh
Q psy6665 142 LIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQL 220 (420)
Q Consensus 142 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (420)
.+. ...+...++++++.++. .+. +... .....+++...+..+.++ ++..+ ......+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~ 238 (366)
T TIGR00886 178 LLPALLIFFVGADTPPGKPAT-GKL-----SFKG-------ARWSVGTGALGDQLKVFR-DRHTW-----ILALLYSVTF 238 (366)
T ss_pred HHHHHHHHHhcccCCcccccc-hhc-----cccc-------ccccccchhHHHHHHHHh-ccchh-----hHHHHHHHHH
Confidence 222 11111112111110000 000 0000 000000000112223332 22211 1112222222
Q ss_pred cchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------h---hH
Q psy6665 221 AGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------K---SL 283 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~---~~ 283 (420)
........+.|.++++. |+ +.+.+.......+.++++.++.+++.||+++|+.+..+... . +.
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSL 318 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchH
Confidence 23456677888888775 77 66777778888889999999999999999998765544433 1 11
Q ss_pred HHHHHHH-HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHH
Q psy6665 284 IPVFCIL-FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHIL 331 (420)
Q Consensus 284 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~ 331 (420)
....... ....+.+.+ .+..++...|+.| +++|++.|+.+...++|
T Consensus 319 ~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 319 AVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 1111111 112222222 3445677888887 68999999999887765
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.90 E-value=2.1e-21 Score=180.76 Aligned_cols=318 Identities=16% Similarity=0.151 Sum_probs=191.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhh-----cchh-HHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccc
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTY-----GRRS-LTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLI 69 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~ 69 (420)
|.|.++......+... .+..++ |+++||+ |||| .+..+.++.+++....++. ++.+++..
T Consensus 30 g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~------ 101 (402)
T PRK11902 30 GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLA------ 101 (402)
T ss_pred CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHH------
Confidence 4566666666555554 466777 9999999 8875 7888888887777776654 44455555
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcccc
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~ 144 (420)
++.+++.+ ...++..+++.|+.|+++|+++.++...+..+|.++++.++..+ |||..|++.++..++.
T Consensus 102 ------~~~~~~~~-~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~ 174 (402)
T PRK11902 102 ------VLVAFLSA-SQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAG 174 (402)
T ss_pred ------HHHHHHHH-HHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHH
Confidence 77788888 77778999999999999999999999999999999888765543 8999999988776554
Q ss_pred ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchh
Q psy6665 145 SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIY 224 (420)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
....+..+++.++. + ++.+..++.++++++.++ ++..+. .+....+..... .
T Consensus 175 ~l~~~~~~e~~~~~--------------~--------~~~~~~~~~~~~~~~l~~-~~~~~~-~l~~~~l~~~~~----~ 226 (402)
T PRK11902 175 ALTTLWAPEPEVPA--------------R--------PPRSLGEAVVGPLRDFFS-RRGAWA-LLLLIVLYKLGD----A 226 (402)
T ss_pred HHHHHhcCCCcccc--------------c--------ccchhHHHHHHHHHHHHh-CcCHHH-HHHHHHHHHhHH----H
Confidence 11111111110000 0 000000011223444443 333222 222221211111 1
Q ss_pred hHHHhHHHHH-HhhCC-cchHHHHHHHHH-HHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHH
Q psy6665 225 ITIFYAVQFL-EDMGS-RMNVYLATVLVG-VVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVF 287 (420)
Q Consensus 225 ~~~~~~~~~~-~~~g~-~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~ 287 (420)
....+.+.++ ++.|+ +.+.+......+ ++.+++.++++++.||+++|+.+..+..+ .+....+
T Consensus 227 ~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~ 306 (402)
T PRK11902 227 FAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTM 306 (402)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 1112233334 33477 555666654444 46889999999999999988876554433 0111111
Q ss_pred HHHH-----HHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHH
Q psy6665 288 CILF-----YVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVI 362 (420)
Q Consensus 288 ~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 362 (420)
.... ..........+....++.+.+|.+.+ ++.+....++..+++.+.|.+.|..| +...|.+.+.++++
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~ 381 (402)
T PRK11902 307 ALAIGIENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALP 381 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHH
Confidence 1111 11111112234444677777775544 55555666777766778999999999 88888888877777
Q ss_pred HHHHh
Q psy6665 363 SIVYV 367 (420)
Q Consensus 363 ~~~~~ 367 (420)
+.++.
T Consensus 382 ~~~~~ 386 (402)
T PRK11902 382 GLALL 386 (402)
T ss_pred HHHHH
Confidence 76554
No 85
>KOG2504|consensus
Probab=99.90 E-value=3.4e-23 Score=193.91 Aligned_cols=352 Identities=16% Similarity=0.126 Sum_probs=244.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHh-hccccccchhHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMT-GQIEKSLIPVFCILFY 77 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~-~r~~~~~~~~~~~~~l 77 (420)
+.+.+++.++.++......+..++ +.+.||+|.|++.+.|.++.+++.++..++ +|++++ .- ++
T Consensus 77 ~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~g------------vi 144 (509)
T KOG2504|consen 77 GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFG------------VI 144 (509)
T ss_pred CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH------------HH
Confidence 455666788888888888888888 999999999999999999999999999999 555544 55 99
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccceeeecC
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWLLNKG 153 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l~~~~ 153 (420)
.|+|.+ +...+...++..+| +++|+.+.|+..++.++|..+-|.+...+ |||..+++.+.+.+-....-+..++
T Consensus 145 ~G~G~~-~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 145 GGLGLG-LIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred hhccch-hhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999 77776888888887 57899999999999999999888887776 9999998888776544111111111
Q ss_pred ------cHHHHHHHH-HHH--------h-c-chhhhhhhH----HHHhhhccchhhh--hhhhHHHHHhhccccchHHHH
Q psy6665 154 ------RANQALKSL-KYL--------A-R-NYKEVKNKE----QELKKMNSTKENQ--SLSARLIKMVTMATGIKPLLV 210 (420)
Q Consensus 154 ------~~~~~~~~~-~~~--------~-~-~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 210 (420)
+.+++.... ... + . .+.+..... ...+.++..++.+ ........++ .+.++.+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~ll~~~~fl 301 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLD-LSLLKDPKFL 301 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhh-HHHHcCchHH
Confidence 000000000 000 0 0 000000000 0000000000000 0001111111 2334445666
Q ss_pred HHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch--hhHhhhccc-------
Q psy6665 211 ITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR--SLTMFSQIE------- 280 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~------- 280 (420)
.......+...++.....++|.+..+.++ ..++.......++..++++++.|++.|+...+ ....++.+.
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 66666666666788899999999998888 88999999999999999999999999998843 333333332
Q ss_pred ----hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHH
Q psy6665 281 ----KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFF 356 (420)
Q Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~ 356 (420)
..+..+...+.+.+.....+.......+.|+++.+.-..+.|+...+..++..++|++.|.+.|..|+|...|...
T Consensus 382 ~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~ 461 (509)
T KOG2504|consen 382 LPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFC 461 (509)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhc
Confidence 3444455555555554445555555688899999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHhh
Q psy6665 357 ALISVISIVYVY 368 (420)
Q Consensus 357 ~~~~~~~~~~~~ 368 (420)
+...+++..+.+
T Consensus 462 g~~~~~s~~~~~ 473 (509)
T KOG2504|consen 462 GLCFLLSAVLLL 473 (509)
T ss_pred ChHHHHHHHHHH
Confidence 877777776553
No 86
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=5.6e-21 Score=166.46 Aligned_cols=319 Identities=12% Similarity=0.068 Sum_probs=228.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~ 74 (420)
|+.+..+..++...++.|+.+++++ |++.+|+|+|+.+++|+.++++++.++.-+ +..++.+-
T Consensus 43 f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~l----------- 111 (422)
T COG0738 43 FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVAL----------- 111 (422)
T ss_pred hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHH-----------
Confidence 4567788889999999999999999 999999999999999999999999988533 88888888
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----------------------hhH
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----------------------HWR 131 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------------------~wr 131 (420)
++.|.|.+ .....++.+++...|+++....+.+.+..+++|.+++|+++..+ .|+
T Consensus 112 -Fila~Gi~-~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 112 -FILASGIG-LLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred -HHHHhhhH-HHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 99999999 88888999999999999999999999999999999999988765 266
Q ss_pred HHHHhHhhhccccccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHH
Q psy6665 132 TVAWLSLAYILIPSPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVI 211 (420)
Q Consensus 132 ~~f~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (420)
++|...+...++........|. ++.++ .+.++.+.++....+.++ +++. +.-.+.
T Consensus 190 ~pYl~~~~~lvll~v~~~~~k~---------------p~~~~--------~~~~~~~~~~~~~~~l~~-~~~~-~~gvl~ 244 (422)
T COG0738 190 FPYLILAGLLVLLAVLILLSKL---------------PDLQV--------AAPSLGASGSAGLSSLFQ-NKHL-RLGVLA 244 (422)
T ss_pred hHHHHHHHHHHHHHHHHHhccC---------------CcCCc--------ccccccccccchHHHHHh-ChHH-HHHHHH
Confidence 6776666655554111111110 00000 000000011113344443 3222 222223
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------- 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------- 280 (420)
.+++. ..-.....|++.|+.+. |+ ..++....+....+.++|++++..+..|+...+.+.....+
T Consensus 245 ~FlYV----G~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 245 IFLYV----GAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHH----hHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 33333 34556788999999884 87 77788888889999999999999999999988877766644
Q ss_pred --hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHH
Q psy6665 281 --KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFAL 358 (420)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~ 358 (420)
++...+ ......+.+...+.|..++...+..|++ ....|.......+|+++.|++.|++.|..| ....+.....
T Consensus 321 l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~~~~~~~~pl 396 (422)
T COG0738 321 LIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMFG-IQLTFLIVPL 396 (422)
T ss_pred HhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccCcc--ccccceeeeeheecchHHHHHHHHHHHhhh-hHHHHHHHHH
Confidence 333333 3333444555566788889999998833 444555566678899999999999999999 5555555566
Q ss_pred HHHHHHH
Q psy6665 359 ISVISIV 365 (420)
Q Consensus 359 ~~~~~~~ 365 (420)
.|.+..+
T Consensus 397 lc~lyV~ 403 (422)
T COG0738 397 LCYLYVL 403 (422)
T ss_pred HHHHHHH
Confidence 6665553
No 87
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=2.6e-21 Score=177.29 Aligned_cols=288 Identities=15% Similarity=0.092 Sum_probs=181.2
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhh-----cchhHH-HHhhHHHHHHHHHHHHh-----HHHHHhhccccccc
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTY-----GRRSLT-MFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLI 69 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~-----Grr~~l-~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~ 69 (420)
|.|.++....... .+...+ .++ |+++||+ ||||.+ +.+.++.++...+.++. .+.+....
T Consensus 19 g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~------ 90 (356)
T TIGR00901 19 NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLA------ 90 (356)
T ss_pred CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHH------
Confidence 4556665555433 333344 667 9999998 898874 56777777776666554 33444455
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----h--------hHHHHHhH
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----H--------WRTVAWLS 137 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~--------wr~~f~~~ 137 (420)
++.+++.+ ...++..+++.|++|+|+|+++.++...+..+|.++++.++..+ + ||..|++.
T Consensus 91 ------~~~~~~~~-~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 91 ------FLIAFFSA-TQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred ------HHHHHHHH-HHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 77888888 77777999999999999999999999999999999999888654 6 99999988
Q ss_pred hhhccccc-cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHH
Q psy6665 138 LAYILIPS-PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFA 216 (420)
Q Consensus 138 ~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (420)
++..++.. ..++..+++.++. + ++.+++++.++..++.++ ++.. ++.........
T Consensus 164 ai~~l~~~~~~~~~~~e~~~~~--------------~--------~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~ 219 (356)
T TIGR00901 164 ALLILPGLLVTLFLAKEPQEDA--------------S--------VPKPLTQAVLKPIREFFQ-RKNM-IQALLLLLLIV 219 (356)
T ss_pred HHHHHHHHHHHHHhccCCCccc--------------c--------cchhHHHHHHHHHHHHHH-hcCc-hHHHHHHHHHH
Confidence 88766541 1111112111000 0 000000011223344443 2221 11222222222
Q ss_pred HHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHH-HHHHHHHHHHHHhhhccCchhhHhhhccc----------h---
Q psy6665 217 LQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVG-VVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------K--- 281 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~--- 281 (420)
......+....+.|.++++.|+ +.+.+......+ +..+++.++++++.||+|+|+.+..+.++ .
T Consensus 220 -~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~ 298 (356)
T TIGR00901 220 -LYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASN 298 (356)
T ss_pred -HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222355677788888887787 556565555544 57789999999999999998887766655 0
Q ss_pred --------hHHHHHHHHHHH-HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHH
Q psy6665 282 --------SLIPVFCILFYV-AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAH 329 (420)
Q Consensus 282 --------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~ 329 (420)
+........... .+......+...++..|.+|+++||+.+|+.+...+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 299 GHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred CcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 001111111111 222223456667999999999999999999887654
No 88
>KOG3764|consensus
Probab=99.89 E-value=1.1e-22 Score=175.78 Aligned_cols=319 Identities=9% Similarity=0.082 Sum_probs=222.0
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
.+..+....++...+.+.+.+++ |.+.||+|+|..+++|...+..+++++++. ++++++.| .+||
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR------------~LQg 170 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVAR------------SLQG 170 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHH------------HHhh
Confidence 34567788899999999999999 999999999999999999999999999999 99999999 9999
Q ss_pred HHhhcccchhhhhhhhhccCccc-hhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccccccc-eeeecC
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDL-RGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPV-WLLNKG 153 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~-r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~-~l~~~~ 153 (420)
+|.+ +......++++|.+|+++ |++++|+.-.+.++|.++||..|+.+ |.+.+|++.++++++..+. .+..+.
T Consensus 171 vgsA-~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 171 VGSA-FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhHH-HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 9999 888889999999999765 79999999999999999999999987 9999999999988875111 111111
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
... ..++.++..+..++++ .+.++...........+....--.++..
T Consensus 250 ~~~---------------------------~~~~~~~~~~~~~Ll~------dP~I~~~agai~~~n~~lafLePtlslw 296 (464)
T KOG3764|consen 250 TEM---------------------------DPDSTEQGTPMWSLLM------DPYILLIAGAITFSNSSLAFLEPTLSLW 296 (464)
T ss_pred ccc---------------------------CccccccCccHHHHHh------CchHhhhhcchhhccchHHHhCcccHHH
Confidence 000 0001112223344443 2223333222222222222222223333
Q ss_pred HHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC--chhhHhhhccc-----------hhHHHHHH----HHHHHH
Q psy6665 234 LEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG--RRSLTMFSQIE-----------KSLIPVFC----ILFYVA 294 (420)
Q Consensus 234 ~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~-----------~~~~~~~~----~~~~~~ 294 (420)
..+. .. ..+.+.......+...++..+.|.+.||++ |......+.+. +.+..++. ..+...
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH
Confidence 3332 33 336777888889999999999999999999 43222222222 22222221 222222
Q ss_pred HHhhchhhHHHHHhcccCChh---hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLE---IRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.......|.. .+..|.-..+ .-|...++......++.+++|.+.|.+.+..| +.+...+.+...++..-++.+
T Consensus 377 ~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 377 LADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred HHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHH
Confidence 2222233332 4444443333 66889999999999999999999999999999 888888888888877766543
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.88 E-value=6e-21 Score=180.26 Aligned_cols=353 Identities=13% Similarity=0.060 Sum_probs=200.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh---HHHHHhhccccccchhHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY---TQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~ 75 (420)
+|.+.++.....+.+.....+..++ |+++|| +||||+++.+.++++++++.++++ ...+++.|
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~------------ 112 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIAL------------ 112 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHH------------
Confidence 3556677777777777677777778 999999 999999999999999999999887 33455789
Q ss_pred HHHHHHhhcccchhhhhhhhhccCcc--chhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccccee
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVARPD--LRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l 149 (420)
+++|+|.| ...+...+++.|.+|++ +|+++.++++.+.++|..++|.+++++ |||+.|++.++..++....+.
T Consensus 113 ~l~~ig~g-~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~ 191 (489)
T PRK10207 113 GTIAVGNG-LFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYF 191 (489)
T ss_pred HHHHhccc-cccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999 77777899999999887 457889999999999999988888776 899999986543222210111
Q ss_pred eecCcH------H-H----HHHHHH----------HHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHH
Q psy6665 150 LNKGRA------N-Q----ALKSLK----------YLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPL 208 (420)
Q Consensus 150 ~~~~~~------~-~----~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (420)
..++.. + + ...... ........................ ..-..+..+.++..+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~f~~~~~~~~~~~r~r~ 268 (489)
T PRK10207 192 ACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVT---IIFFREAFKLDKTGRNKM 268 (489)
T ss_pred HcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH---HHHHHHHhcCCHHHHHHH
Confidence 111100 0 0 000000 000000000000000000000000 000000000011112222
Q ss_pred HHHHHHH--HHHHhcchhhHHHhHHHHHHh-h-----CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhh-------
Q psy6665 209 LVITVLF--ALQQLAGIYITIFYAVQFLED-M-----GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSL------- 273 (420)
Q Consensus 209 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~-----g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~------- 273 (420)
+..+.+. ....+..+....+..+.+.++ . |+............+..++.+++.+++.||+++|+.
T Consensus 269 ~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k 348 (489)
T PRK10207 269 FVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMK 348 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHH
Confidence 2222111 111222222333444444443 1 333344555566667777888888999999988852
Q ss_pred Hhhhccc---------------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHH
Q psy6665 274 TMFSQIE---------------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILM 332 (420)
Q Consensus 274 ~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~ 332 (420)
+..++++ .+.+.++...++.+.......+....++.+..|++.++.++|+.+....+|+
T Consensus 349 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 349 FTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 2222111 1112222222233333333466667888889999999999999999999999
Q ss_pred HHHHHHhHHHHH---------hcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 333 FFALQYYPWFKD---------SVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 333 ~~~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.++..+...... ..+.+...|...++..++..++.+.
T Consensus 429 ~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 429 LLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 998777654421 0111345555566555555554443
No 90
>KOG2615|consensus
Probab=99.88 E-value=1.3e-21 Score=168.26 Aligned_cols=313 Identities=13% Similarity=0.068 Sum_probs=188.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcc
Q psy6665 9 LATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAM 85 (420)
Q Consensus 9 ~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~ 85 (420)
...-+.+.+++.++++. |.++||+|||++++++++..++...+.+.+ +..+.+.| ++.|+..| .
T Consensus 71 GflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR------------~l~Gi~kg-n 137 (451)
T KOG2615|consen 71 GFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLAR------------FLGGIFKG-N 137 (451)
T ss_pred hhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HhhhhccC-c
Confidence 34557889999999999 999999999999999999999999999999 86777779 99999999 8
Q ss_pred cchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhhhh------HHHHHh----Hhhhccc--cccceeeecC
Q psy6665 86 GPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVLHW------RTVAWL----SLAYILI--PSPVWLLNKG 153 (420)
Q Consensus 86 ~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~~w------r~~f~~----~~~~~~~--~~~~~l~~~~ 153 (420)
..+ +.++++|..++|+|+++++..+..+++|.++||++|+++.- +.+|.. ..++... ....|++ ++
T Consensus 138 l~v-~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~l-pE 215 (451)
T KOG2615|consen 138 LSV-IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFL-PE 215 (451)
T ss_pred hHH-HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhC-Cc
Confidence 887 89999999999999999999999999999999999998722 122222 1111111 0111221 11
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchH--HHHHHHHHHHHHhcchhhHHHhHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKP--LLVITVLFALQQLAGIYITIFYAV 231 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (420)
+.+..+ +.+++.+-.+..+++.+..... ........+ +++...+ ....+.+..+.... .+....+.+
T Consensus 216 TL~~rk----~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~lr-n~p~~~~i~~~~i~~l~~~ly~~-l~s~~~~t~ 284 (451)
T KOG2615|consen 216 TLPLRK----RNDEHSTLQEAADDRLALLKFA-----RIFKVAALR-NPPLLDFISVLRIFGLHYFLYLE-LFSGLENTV 284 (451)
T ss_pred cccchh----hcccccchhhhhhhhhhhcchh-----hhhhhhhhc-CccccchHHHHHHHHHHHHHHHH-HHHHHHhhH
Confidence 110000 0000000000000000000000 000011111 2222221 11111111111111 222233333
Q ss_pred HHH--HhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC--chhhHhhhccc-----------hhHHHHHHHHHHHHH
Q psy6665 232 QFL--EDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG--RRSLTMFSQIE-----------KSLIPVFCILFYVAI 295 (420)
Q Consensus 232 ~~~--~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 295 (420)
..+ +..|+ +.+.+......++.+.+.........+|.+ -+-.+..+..+ .....+.....+..+
T Consensus 285 ~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf 364 (451)
T KOG2615|consen 285 LFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSF 364 (451)
T ss_pred HHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHH
Confidence 444 23377 777777777777777777777766667665 33333333332 111122222222223
Q ss_pred HhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 296 SVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 296 ~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
......+....+.....|+++||+.+|+....+.++-++||.+.|.+..+.-
T Consensus 365 ~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 365 STASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred HHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 2333345556788889999999999999999999999999999998776543
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.88 E-value=2.8e-20 Score=175.70 Aligned_cols=354 Identities=11% Similarity=0.004 Sum_probs=212.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+|.+..+....++.+.++..+++++ |+++|| +|||++++++.++.+++.++.+++ ++.+++.| +
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~------------~ 110 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGL------------G 110 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHH------------H
Confidence 3567778888999999999999999 999999 899999999999999999988887 67788899 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccc---hhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccccee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDL---RGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~---r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~~~l 149 (420)
+.|+|.| ...+...++++|++|+++ |+++.++.+.+.++|..++|.+++.+ +||+.|++.++..++....++
T Consensus 111 l~g~g~g-~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 111 TIAVGSG-LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHhccc-cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 9999999 777778899999998764 88899999999999999999998876 899999887754433311111
Q ss_pred eecCcH----------HHHH-HHHHHHh-----------c--chhhhhhhHHHHh---hhccc-hhhhhhhhHHHHHhhc
Q psy6665 150 LNKGRA----------NQAL-KSLKYLA-----------R--NYKEVKNKEQELK---KMNST-KENQSLSARLIKMVTM 201 (420)
Q Consensus 150 ~~~~~~----------~~~~-~~~~~~~-----------~--~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 201 (420)
..++.. ++.+ +...... . ...+....+.-.. ..... ......++..+. .
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 266 (475)
T TIGR00924 190 AGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDA---V 266 (475)
T ss_pred HcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCH---H
Confidence 111000 0000 0000000 0 0000000000000 00000 000000000000 0
Q ss_pred cccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-C-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCc-----
Q psy6665 202 ATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-G-----SRMNVYLATVLVGVVRMVFGLLTSQLLRTYGR----- 270 (420)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-----~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~----- 270 (420)
.+.+...++..++.....+..+.......+.+.++. + +............+.-++..++..++..|.+|
T Consensus 267 ~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~ 346 (475)
T TIGR00924 267 ARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDP 346 (475)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 001111122222222222222333444445554442 2 22235567777777777777665543333333
Q ss_pred hhhH--hhhccc--------------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHH
Q psy6665 271 RSLT--MFSQIE--------------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLA 328 (420)
Q Consensus 271 ~~~~--~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 328 (420)
+... .+++++ .+.+.++...++.........|...++..+..|++.||+.+|+.....
T Consensus 347 ~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~ 426 (475)
T TIGR00924 347 TTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQ 426 (475)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 2222 222222 122333333344444444557888899999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 329 HILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 329 ~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
.+|..+++.+.....+..+ +...+...++++++..++.++..
T Consensus 427 ~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 427 AMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887766666 66667666666666666554443
No 92
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.88 E-value=4.2e-20 Score=158.57 Aligned_cols=320 Identities=15% Similarity=0.161 Sum_probs=240.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
|.+.+......++..+...+.+++ .+++.|+|.++.+..++++.+++.++-... .+.++.+- .+.|
T Consensus 43 gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt------------~l~G 110 (395)
T COG2807 43 GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGT------------LLAG 110 (395)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHH------------HHHH
Confidence 556777788888899999999999 999999999999999999999999998887 77788888 9999
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhccccccceeeecCc
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIPSPVWLLNKGR 154 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~~~~~l~~~~~ 154 (420)
.|.+ ...+..+..+.+.+| |+-+..+++|....++|..+++.+...+ +||....+-+.++++....|+....|
T Consensus 111 ~gIa-v~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r 188 (395)
T COG2807 111 AGIA-VINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALR 188 (395)
T ss_pred hhHH-HHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 9999 999999999999997 5579999999999999888887666555 79999988888888764445432111
Q ss_pred HHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHH
Q psy6665 155 ANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFL 234 (420)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (420)
... .. .+++..+ ..+.++.+..+...+++..+...+|....|+|.++
T Consensus 189 ~~~------------------------~~---~~~~~~~------~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~il 235 (395)
T COG2807 189 EQA------------------------AS---IATKLVS------VRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAIL 235 (395)
T ss_pred ccc------------------------cc---ccccccc------ccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 100 00 0000000 12344566677777888888888999999999999
Q ss_pred HhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhH-hhhccc-----------hhHHHHHHHHHHHHHHhhchh
Q psy6665 235 EDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLT-MFSQIE-----------KSLIPVFCILFYVAISVIGML 301 (420)
Q Consensus 235 ~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.|.|+ +.+++...+...+.+++.++....+.+|...++.+ .....+ .....+.. .+..+....+.+
T Consensus 236 i~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F 314 (395)
T COG2807 236 IDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAF 314 (395)
T ss_pred HHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHH
Confidence 99999 88999999999999999999999999976544333 332222 11111111 122223333445
Q ss_pred hHHHHHhcccC-ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 302 SIPWTMTAEIF-PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 302 ~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
+.....+.+.. .++..+.-.|+.+.++++-.+++|.+.|++.|..|++......++.+.++..+.-+.
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 66666666554 456668889999999999999999999999999998888777777777666665543
No 93
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.87 E-value=2.2e-19 Score=167.43 Aligned_cols=335 Identities=13% Similarity=0.142 Sum_probs=226.8
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhH-HHHHHHHHHHHhHHHHHhhccccccchhHHHHHHHHHHhhcc
Q psy6665 8 YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGL-GMAVCMTTSGYYTQLIMTGQIEKSLIPVFCILFYVAISVIAM 85 (420)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~ 85 (420)
+..+.++..+-.++..|+ |.++|+-|+||.++.... +..++++.+.+. ..-.+.+...++++.-++.+ .
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v--------~~~~~~~~~~l~iia~v~~~-~ 142 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFV--------SPGQWWLALVLFIIANVGYE-A 142 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHHHH-H
Confidence 445666777777778888 999999998777666444 444444444443 01111222233466667777 6
Q ss_pred cchhhhhhhhhccCccch--------------------------hhhHhHHHHHHHHHHHHHHHHhhhh-----------
Q psy6665 86 GPSPAIVYITEVARPDLR--------------------------GALICIGPSITSLGMVIVYALGAVL----------- 128 (420)
Q Consensus 86 ~~~~~~~~i~e~~~~~~r--------------------------~~~~~~~~~~~~lG~~~~~~~~~~~----------- 128 (420)
..+...+++.|..+++++ ++..+.-.+...+|.++...+...+
T Consensus 143 ~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~ 222 (477)
T PF11700_consen 143 SNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNT 222 (477)
T ss_pred HHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 677789999999999998 9999999888888888877665544
Q ss_pred -hhHHHHHhHhhhcccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHh-hccccc
Q psy6665 129 -HWRTVAWLSLAYILIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMV-TMATGI 205 (420)
Q Consensus 129 -~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 205 (420)
+-|..+.+.++.-++. .|.++..++++... .....++.-+..++++.+ .++..+
T Consensus 223 ~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-----------------------~~~~~~~~~~~g~~~l~~t~k~~~~ 279 (477)
T PF11700_consen 223 WAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-----------------------PLPSGSSYLRFGFKRLWRTFKEIRK 279 (477)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-----------------------CCCcchhHHHHHHHHHHHHHHHHHh
Confidence 2477777777776665 44444444332210 000000001222333322 111122
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch--hhHhhhccc-
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR--SLTMFSQIE- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~- 280 (420)
.+-+..+++..+....+...+......|..+. |+ ..+.........+.+++|+++.+++.||+|.| +.+..+...
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 33344445555555566778888888888755 88 77778888888999999999999999999998 666655544
Q ss_pred ------------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHH
Q psy6665 281 ------------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWF 342 (420)
Q Consensus 281 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l 342 (420)
.+........++.+.+..+..+..-++.+|+.|+++.+..+|++.......++++|.+.|.+
T Consensus 360 ~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 360 IIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11223334444455555566778889999999999999999999999999999999999999
Q ss_pred HHhcCcchHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 343 KDSVGGSAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 343 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
.+.+|+.+..+....++.+++.++. ..++..+
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~ 471 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILL-FFVDVEK 471 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHH-hhccchh
Confidence 9999978888888888777777765 3444433
No 94
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.86 E-value=4.6e-20 Score=166.42 Aligned_cols=321 Identities=11% Similarity=0.070 Sum_probs=199.7
Q ss_pred CCCccch-HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHH
Q psy6665 1 MGSRMNV-YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 1 ~~~~~~~-~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~ 76 (420)
+|.+..+ ...+.++++.+++++.++ |+++||+|.|+++.++.+.+++.+++.+++ +..+.+.| +
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R------------~ 123 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLME------------V 123 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------H
Confidence 4667777 889999999999999999 999999999999999999999999999998 99999999 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhh---cccc-cccee
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAY---ILIP-SPVWL 149 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~---~~~~-~~~~l 149 (420)
+.|++.| ... +...++..|+|+++|+++.++..++..+|.++++++++.+ |||+.+.+.-+- ..+. ...++
T Consensus 124 llGvaEA-~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMA-ARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHH-HHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 666 6999999999999999999999999999999999988876 888754433211 1111 00111
Q ss_pred eecCcHHHHHHHHHHH--hcc-hhhhhhhHHHHhhhccch-h-hhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcch
Q psy6665 150 LNKGRANQALKSLKYL--ARN-YKEVKNKEQELKKMNSTK-E-NQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGI 223 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 223 (420)
+.+ .++..-..+.- ++. ..+.+...++. ..+..+ . .......+.+++ ....++.+.++.-.++.....+++
T Consensus 202 LP~--~~~sl~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~ 278 (511)
T TIGR00806 202 LKR--PKRSLFFNRLEDVRGALPCELDQMVPGP-GGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGY 278 (511)
T ss_pred CCC--CchhhhhccccccccccccccccCCCCC-ccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHH
Confidence 111 11100000000 000 00000000000 000000 0 000111122222 222333344444445555566678
Q ss_pred hhHHHhHHHHHHhhCC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS--RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVF 287 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~ 287 (420)
+.+.+|.....+...- +..-+..-.+..+.+.+..+..|++-.++.+...+.++... +-|....
T Consensus 279 ~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~ 358 (511)
T TIGR00806 279 YLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYV 358 (511)
T ss_pred HHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHH
Confidence 8888888888776522 22333445556677778888899986665443222222221 2233333
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHh
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYY 339 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 339 (420)
...++...+.+. .++...-+++....+.-|..+|++++..-+.+.+-..+.
T Consensus 359 ~yvlf~~~y~fl-itia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 359 TYVLFRGIYQFL-VPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 344444444332 345556666666767779999999999888887766554
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.85 E-value=7.8e-21 Score=184.39 Aligned_cols=249 Identities=13% Similarity=0.074 Sum_probs=166.8
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-H----------------------
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-T---------------------- 56 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~---------------------- 56 (420)
|+.+..+.....+.+.++.+++.++ ++++||+|||+++.++.++++++++++++. +
T Consensus 63 F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~ 142 (633)
T TIGR00805 63 FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANS 142 (633)
T ss_pred hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccc
Confidence 4556667778889999999999999 999999999999999999999999988764 1
Q ss_pred ------------------------------HHHHhhccccccchhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhh
Q psy6665 57 ------------------------------QLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGAL 106 (420)
Q Consensus 57 ------------------------------~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~ 106 (420)
..++++| +++|+|.+ ...+...+++.|++|+++|+++
T Consensus 143 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r------------~l~GiG~~-~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 143 FLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQ------------LLRGIGAT-PIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred ccccCCCCCCccccccccccccccCCCceehhhHHHH------------HHHhccCC-cchhcCchhhhccCCccccHHH
Confidence 1344566 99999999 7777799999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHhhhh--------------------------hhHHHHHhHhhhcccc-ccceeeecCcHHHHH
Q psy6665 107 ICIGPSITSLGMVIVYALGAVL--------------------------HWRTVAWLSLAYILIP-SPVWLLNKGRANQAL 159 (420)
Q Consensus 107 ~~~~~~~~~lG~~~~~~~~~~~--------------------------~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~ 159 (420)
++++..+..+|..+|+++++.+ +|+..|++.+++.++. .+.+++.++.+++..
T Consensus 210 ~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~ 289 (633)
T TIGR00805 210 IGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGK 289 (633)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCccc
Confidence 9999999999999998887653 1777788877776655 222332222111100
Q ss_pred -HHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh
Q psy6665 160 -KSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM 237 (420)
Q Consensus 160 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (420)
...+..++...+ . .+.+.+.+.....++..+ .+..++.+.++...+..+......+.+..|+|.|+++.
T Consensus 290 ~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~ 360 (633)
T TIGR00805 290 RVNVDVHETEKLE-K--------SEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQ 360 (633)
T ss_pred ccchhhhhhhccc-c--------cccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 0 000000000001111111 11222334455555555555556778889999999875
Q ss_pred -CC-cchHHHHHHHHHH-HHHHHHHHHHHhhhccCch
Q psy6665 238 -GS-RMNVYLATVLVGV-VRMVFGLLTSQLLRTYGRR 271 (420)
Q Consensus 238 -g~-~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~ 271 (420)
|+ +.+++.......+ +.+++.+++|+++||++.+
T Consensus 361 ~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 361 YGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred cCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 88 6777777666555 5689999999999999854
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.85 E-value=4.2e-19 Score=166.70 Aligned_cols=317 Identities=14% Similarity=0.064 Sum_probs=189.4
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhh
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~ 83 (420)
.+.+..+...++..++.++ |+++|.||||+.++.+.++..+|++.++.+ ...++.+. .+.|+|.|
T Consensus 79 ~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~------------~l~GvgaG 146 (599)
T PF06609_consen 79 NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGM------------VLYGVGAG 146 (599)
T ss_pred cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHH------------HHHHHhhH
Confidence 3445666788899999999 999999999999999999999999999998 99999999 99999988
Q ss_pred cccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc---ccceeeecCcHH
Q psy6665 84 AMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP---SPVWLLNKGRAN 156 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~---~~~~l~~~~~~~ 156 (420)
.... ....++|..|.|.|....++...........++.++..+ +|||.|++..+...+. ...|+..+.+.+
T Consensus 147 -~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~ 224 (599)
T PF06609_consen 147 -VQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQ 224 (599)
T ss_pred -HHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 7666 566799999999998887777665555555566666554 8999999888766554 111111111100
Q ss_pred ------HHHHHHHHHhc-------------------chhhhhhhHHHHhhhc-------------cchhhhhhhh--HHH
Q psy6665 157 ------QALKSLKYLAR-------------------NYKEVKNKEQELKKMN-------------STKENQSLSA--RLI 196 (420)
Q Consensus 157 ------~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~-------------~~~~~~~~~~--~~~ 196 (420)
..++.++++.- ......++.+..-... .+.....+.+ ..+
T Consensus 225 ~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~ 304 (599)
T PF06609_consen 225 LHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHR 304 (599)
T ss_pred hccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHH
Confidence 00111111110 0000000000000000 0000000111 112
Q ss_pred HHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-c---chHHHHHHHHHHHHHHHHHHHHHhhhccCch
Q psy6665 197 KMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-R---MNVYLATVLVGVVRMVFGLLTSQLLRTYGRR 271 (420)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 271 (420)
+++ + ++.+...+...+.....++....+.|...... +. + ...+......+++..++..+.+.+..+++|-
T Consensus 305 Lf~-~----~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~ 379 (599)
T PF06609_consen 305 LFK-D----RRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHI 379 (599)
T ss_pred Hhc-c----chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccch
Confidence 222 1 12233333333333333555556666655543 22 1 2455667777888888999999999888875
Q ss_pred hhH-hhhccc-------------hhHHHHHHHHHHHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHH
Q psy6665 272 SLT-MFSQIE-------------KSLIPVFCILFYVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFAL 336 (420)
Q Consensus 272 ~~~-~~~~~~-------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 336 (420)
|.. +++..+ ++....+...++ .+.+.+. .........-..|++.-+++.|+..+++.+|+.++.
T Consensus 380 Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l-~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~ 458 (599)
T PF06609_consen 380 KWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVL-AGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGY 458 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHH-HHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHH
Confidence 443 344332 111112222222 2222232 333345556678999999999999999999999988
Q ss_pred HHhHHHH
Q psy6665 337 QYYPWFK 343 (420)
Q Consensus 337 ~~~g~l~ 343 (420)
.+...+.
T Consensus 459 aIy~~I~ 465 (599)
T PF06609_consen 459 AIYNAIF 465 (599)
T ss_pred HHHHHHH
Confidence 8875544
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=1.1e-18 Score=161.91 Aligned_cols=319 Identities=12% Similarity=-0.035 Sum_probs=189.1
Q ss_pred CCccchHHHH--HHHHHHHHHHHHHH--HHHHHhhcchhHHHHhhHHH-HHHHHHHHHh------HHHHHhhccccccch
Q psy6665 2 GSRMNVYLAT--VLVGVVRMVFGLLT--SQLLRTYGRRSLTMFSGLGM-AVCMTTSGYY------TQLIMTGQIEKSLIP 70 (420)
Q Consensus 2 ~~~~~~~~~~--~~~~~~g~~~~~~~--g~l~dr~Grr~~l~~~~~~~-~~~~~~~~~~------~~~~~~~r~~~~~~~ 70 (420)
|.|.++.... .+...+...+.+++ ++..||+||||..++...+. ++.....+.. ..+++..-
T Consensus 32 g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 104 (390)
T TIGR02718 32 GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLL------- 104 (390)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHH-------
Confidence 3455555443 23445555555555 55789999999876654332 2122222211 11112222
Q ss_pred hHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh----hhhHHHHHhHhhhcccc-c
Q psy6665 71 VFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV----LHWRTVAWLSLAYILIP-S 145 (420)
Q Consensus 71 ~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~----~~wr~~f~~~~~~~~~~-~ 145 (420)
++.++..+ ...+....+..|..++++++...+....+..+|..+++..... +|||..|++.+++.++. .
T Consensus 105 -----~~~~~~~a-~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~ 178 (390)
T TIGR02718 105 -----ACASLASA-TQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLV 178 (390)
T ss_pred -----HHHHHHHH-HHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 55666666 6666678888899988888988888888888899888865444 49999999998876654 1
Q ss_pred cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 146 PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
+.+...+++.++ ++ +++++..+.++.++ ++..+. .....++.. .....
T Consensus 179 ~~~~~~~~~~~~------------------------~~--~~~~~~~~~~~~l~-~~~~~~-~~~~~~l~~----~~~~~ 226 (390)
T TIGR02718 179 CVLWLKDRAVAS------------------------PE--APLARRASLFRFFR-RPLAWS-LLALALLSA----MTAVS 226 (390)
T ss_pred HHHHcCCCCcCc------------------------cc--cchhhHHHHHHHHc-CcCHHH-HHHHHHHHH----HHHHH
Confidence 111111111000 00 00001122334443 332222 222222211 12344
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHH-HHHHHHHHHHHhhhccCchhhHhhhccch----------h------HHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGV-VRMVFGLLTSQLLRTYGRRSLTMFSQIEK----------S------LIPVF 287 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~~~~~~~----------~------~~~~~ 287 (420)
...+.+.++++.|+ +++.+......+. ..+++.++.|++.||+|+|+.+..+..+. . .....
T Consensus 227 ~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (390)
T TIGR02718 227 GFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVA 306 (390)
T ss_pred HHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHH
Confidence 55577788888888 6777777666654 56677899999999999998877665431 0 00000
Q ss_pred HHHHHHHHHhhch-hhHHHHHhcccCCh-hhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHH
Q psy6665 288 CILFYVAISVIGM-LSIPWTMTAEIFPL-EIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 288 ~~~~~~~~~~~~~-~~~~~~~~~~~~p~-~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
........+..+. .+...+...+..++ +.+++.+++.+...+++..++|.+.|.+.|..| +...+...+++.+++.+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 307 WSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHH
Confidence 1111111111122 23334555555555 889999999999999999999999999999998 77888777766666554
Q ss_pred H
Q psy6665 366 Y 366 (420)
Q Consensus 366 ~ 366 (420)
.
T Consensus 386 ~ 386 (390)
T TIGR02718 386 L 386 (390)
T ss_pred H
Confidence 3
No 98
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.84 E-value=6.6e-19 Score=167.07 Aligned_cols=315 Identities=11% Similarity=0.061 Sum_probs=179.4
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHH----hhcc-hhHHHHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLR----TYGR-RSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 75 (420)
|.+.......+.+.-+--++..|+ |.++| |+|| |+.++.+.+..+++.+++...... -.....+.+...+
T Consensus 38 Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~----~~~~~~~~~~~~~ 113 (473)
T PRK10429 38 GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLF----EGTAQYVFVCVTY 113 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCC----CccHHHHHHHHHH
Confidence 566777778888888888889999 99999 6699 666666777777665444321000 0000112223345
Q ss_pred HHHHHHhhcccchhhhhhhhhcc-CccchhhhHhHHHHHHHHHHHHHHHHhhh----h-------hhHHHHHhHhhhccc
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVA-RPDLRGALICIGPSITSLGMVIVYALGAV----L-------HWRTVAWLSLAYILI 143 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~----~-------~wr~~f~~~~~~~~~ 143 (420)
++.+++.. +..++..++..|.. ++++|.+..++...+.++|..+.+.+... + +|+....+.+++.++
T Consensus 114 ~l~~~~~t-~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~ 192 (473)
T PRK10429 114 ILWGMTYT-IMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIV 192 (473)
T ss_pred HHHHHHHH-HHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 77788888 77777889999999 58999999998766666665544433221 1 467766666665554
Q ss_pred c-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcc
Q psy6665 144 P-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAG 222 (420)
Q Consensus 144 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (420)
. ...++..+++.++. + .+ ++++++.+.++.++...+. ++....+....+.. ..
T Consensus 193 ~~~~~~~~~~e~~~~~--------------~--------~~--~~~~~~~~~~~~~~~~~~n-~~~~~ll~~~~~~~-~~ 246 (473)
T PRK10429 193 STIITLRNVHEVYSSD--------------N--------QV--SAEGSHLTLKDIVALIYKN-DQLSCLLGMALAYN-IA 246 (473)
T ss_pred HHHHHHcCceecCCcc--------------c--------cc--cccccCCCHHHHHHHHhcC-HHHHHHHHHHHHHH-HH
Confidence 3 11222122211000 0 00 0001112233333200011 11122111111111 12
Q ss_pred hhhHHHhHHHHHHhh-CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hhHHH
Q psy6665 223 IYITIFYAVQFLEDM-GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KSLIP 285 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~~~~ 285 (420)
......+.+.+.+.. +.....+.......+..+++.++.+++.||+|+|+.+..+..+ .+...
T Consensus 247 ~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (473)
T PRK10429 247 SNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALL 326 (473)
T ss_pred HHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHH
Confidence 333344444444433 2233444555566688899999999999999999987655433 01111
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCC-------hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFP-------LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
.....+..........+..+++.+|..+ .+..|..+|...+...++..+++.+.|.+.+..|
T Consensus 327 ~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 327 IVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111122222222334566688888855 3334668999999999999999999999998777
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=8.9e-18 Score=155.72 Aligned_cols=358 Identities=14% Similarity=0.119 Sum_probs=213.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHH----hhcchhHHHHh-hHHHHHHHHHHHHh--HHHHHhhccc-c--cc--
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLR----TYGRRSLTMFS-GLGMAVCMTTSGYY--TQLIMTGQIE-K--SL-- 68 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~--~~~~~~~r~~-~--~~-- 68 (420)
|.+.........+..+..++.+++ |+++| |+|||+.++.+ .....++.++++++ ...++..+.+ . .+
T Consensus 35 g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i 114 (477)
T TIGR01301 35 GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAI 114 (477)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHH
Confidence 556677778888888999999999 99999 59999998875 56666666666665 3332222211 1 11
Q ss_pred chhHHHHHHHHHHhhcccchhhhhhhhhccCccch--hhhHhHHHHHHHHHHHHHHHHhhhh------------------
Q psy6665 69 IPVFCILFYVAISVIAMGPSPAIVYITEVARPDLR--GALICIGPSITSLGMVIVYALGAVL------------------ 128 (420)
Q Consensus 69 ~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r--~~~~~~~~~~~~lG~~~~~~~~~~~------------------ 128 (420)
...+..+.+..++.. ...++..++++|.+|+++| +.+.++.+...++|..+++.+++..
T Consensus 115 ~~~~i~~~lld~~~n-~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 115 IVFVVGFWILDVANN-MLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 111222344556777 6666789999999998865 6799999999999999999888653
Q ss_pred -hhHHHHHhHhhhcccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccch
Q psy6665 129 -HWRTVAWLSLAYILIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIK 206 (420)
Q Consensus 129 -~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (420)
+.|..|++.++..++. ....+..++++...++ +.. +++. ++. ++.+.+..++++++..+..-+
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~----------~~~--~~~~--~~~-~~~~~~~~~~~i~~~~~~mP~ 258 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENPLIGSD----------DFI--NSEA--APP-SKHGEEAFFGELFGAFKYLPR 258 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccCCCccc----------cch--hhhc--ccc-cccchhhhHHHHHHHHHHCCH
Confidence 3466777776665554 2222333332210000 000 0000 000 011112234444441112222
Q ss_pred HHHHHHHHHHHHHhcchhhHHHhHHHHHHhh--CC-c--c----h----HHHHHHHHHHHHHHHHHHHHHhhhccCc-hh
Q psy6665 207 PLLVITVLFALQQLAGIYITIFYAVQFLEDM--GS-R--M----N----VYLATVLVGVVRMVFGLLTSQLLRTYGR-RS 272 (420)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~-~--~----~----~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~ 272 (420)
. +...+...++.+.+.+.+..|...+..+. +- + . + ..+....+++...+.+++..++.+|+|+ |+
T Consensus 259 ~-m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 259 P-VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 2 22233333334445666677777766542 21 1 0 1 2234455566666777788889999985 66
Q ss_pred hHhhhccc-----------hh---------------------HHHHHHHHHHHHHHhhchhhHHHHHhcccCCh--hhhh
Q psy6665 273 LTMFSQIE-----------KS---------------------LIPVFCILFYVAISVIGMLSIPWTMTAEIFPL--EIRG 318 (420)
Q Consensus 273 ~~~~~~~~-----------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~r~ 318 (420)
....+.++ .. ....+......+..-.....++++++++..|+ +..|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 64555333 11 01112222222222223467888999999885 4559
Q ss_pred hhHHHHHHHHHHHHHHHHHHhHHHHHhcCc-chHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 319 IAQGLTFCLAHILMFFALQYYPWFKDSVGG-SAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 319 ~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
..+|+.|.+..+.+.+.....|.+.+..|+ ....+.+.++..+++.+.+++.+|+++.
T Consensus 418 ~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999988987777773 3445566667777788888888887653
No 100
>PTZ00207 hypothetical protein; Provisional
Probab=99.83 E-value=2.2e-18 Score=162.99 Aligned_cols=353 Identities=14% Similarity=0.075 Sum_probs=215.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--------HHHHHhhccccccchh
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--------TQLIMTGQIEKSLIPV 71 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~~~r~~~~~~~~ 71 (420)
+|.+.++.....+++. ......++ |+++||+|||++++++.+++++++++++++ ++.+++.|
T Consensus 57 lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r-------- 127 (591)
T PTZ00207 57 YNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN-------- 127 (591)
T ss_pred hCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH--------
Confidence 3566666666665533 33456667 999999999999999999999999998884 67788899
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHH-HHHHhhhh--hhHHHHHhHhhhcccc----
Q psy6665 72 FCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVI-VYALGAVL--HWRTVAWLSLAYILIP---- 144 (420)
Q Consensus 72 ~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~-~~~~~~~~--~wr~~f~~~~~~~~~~---- 144 (420)
++.|+|.+ ...+.+...+.+|+| ++||++.++...+.++|..+ +++....+ +|+..|++.+++.++.
T Consensus 128 ----~l~G~G~~-~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~ 201 (591)
T PTZ00207 128 ----GLMTLGCM-LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILA 201 (591)
T ss_pred ----HHHHHHHH-HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999 776668889999996 78999999999999999975 44444454 7888888777766655
Q ss_pred --------ccceeeecCcHHHHHHHHHHHhcc--------------------------------------hhh-------
Q psy6665 145 --------SPVWLLNKGRANQALKSLKYLARN--------------------------------------YKE------- 171 (420)
Q Consensus 145 --------~~~~l~~~~~~~~~~~~~~~~~~~--------------------------------------~~~------- 171 (420)
.+++...+++.+++++..++..++ .+.
T Consensus 202 ~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~ 281 (591)
T PTZ00207 202 IVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAV 281 (591)
T ss_pred HhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 222222222112222221110000 000
Q ss_pred ------------------------h-hhhHHHHhhhcc----c-hh------------hhhhhhHHHHHhhccccchHHH
Q psy6665 172 ------------------------V-KNKEQELKKMNS----T-KE------------NQSLSARLIKMVTMATGIKPLL 209 (420)
Q Consensus 172 ------------------------~-~~~~~~~~~~~~----~-~~------------~~~~~~~~~~~~~~~~~~~~~~ 209 (420)
. +.+.+..+..+. . ++ ++..+++.+ ..++.-+
T Consensus 282 v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q------~l~~~d~ 355 (591)
T PTZ00207 282 TVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIE------GLKTARL 355 (591)
T ss_pred HHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHH------HHhchhH
Confidence 0 000000000000 0 00 000001111 2233445
Q ss_pred HHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cch--HHHHHHHHHHHHHHHHHHHHHhhhccCchh----h---Hh--h
Q psy6665 210 VITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMN--VYLATVLVGVVRMVFGLLTSQLLRTYGRRS----L---TM--F 276 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~----~---~~--~ 276 (420)
|+.+...++.........+.+.++.+.. |. .++ .....++.++.+.+|++..|+++....+|+ . +. +
T Consensus 356 Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~ 435 (591)
T PTZ00207 356 WCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFI 435 (591)
T ss_pred HHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHH
Confidence 5555555555555666777778888887 66 333 222678889999999999999873332222 1 11 1
Q ss_pred hccc----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHH-HHHhHHHHHh
Q psy6665 277 SQIE----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFA-LQYYPWFKDS 345 (420)
Q Consensus 277 ~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~-~~~~g~l~~~ 345 (420)
..+. .+...+.+..++.+.......++..+.++|+|. ++-|+-+-+.....-+|+.+- -.+.|.+.|+
T Consensus 436 ~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 436 PSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQ 514 (591)
T ss_pred HHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 111222223333333333345677789999999 777877777777777777654 5667777765
Q ss_pred cC----c--------chHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 346 VG----G--------SAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 346 ~g----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
-. + +..+|++.+++++++.+....+.-+++
T Consensus 515 ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 515 QADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred HHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 32 1 467899999999999888765554444
No 101
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.82 E-value=3.1e-18 Score=162.79 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=101.5
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh---HHHHHhhccccccchhHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY---TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~ 76 (420)
|.+.++.....+.+........++ |+++|| +|||++++.+.++.+++.++++++ .+.+.+.| +
T Consensus 53 g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~------------~ 120 (500)
T PRK09584 53 GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGM------------A 120 (500)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH------------H
Confidence 455555555555554444444567 999999 599999999999999998888876 45667788 9
Q ss_pred HHHHHhhcccchhhhhhhhhccCccc--hhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccc
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDL--RGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILI 143 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~ 143 (420)
++|++.| ...+...+++.|++|+++ |..+.++++.+.++|..++|.+++++ |||+.|++.++..++
T Consensus 121 l~gig~g-~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i 192 (500)
T PRK09584 121 TIAVGNG-LFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLI 192 (500)
T ss_pred HHHHhhh-cccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 9999999 777778899999998654 45678888999999999999888876 899999988754333
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.81 E-value=5.2e-18 Score=159.94 Aligned_cols=311 Identities=11% Similarity=0.101 Sum_probs=179.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHh----hcc-hhHHHHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRT----YGR-RSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 74 (420)
+|.+.......+.+..+..++..|+ |+++|| +|| |+.++.+.+..+++.++...... + .. ..........
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~-~--~~-~~~~~~~~~~ 115 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPD-F--GA-TGKIIYACVT 115 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCC-C--Cc-chHHHHHHHH
Confidence 3677788888899999999999999 999998 887 45566677777666544332200 0 00 0011222233
Q ss_pred HHHHHHHhhcccchhhhhhhhhcc-CccchhhhHhHHHHHHHHHHHHHHHHhhh-----------hhhHHHHHhHhhhcc
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVA-RPDLRGALICIGPSITSLGMVIVYALGAV-----------LHWRTVAWLSLAYIL 142 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~-~~~~r~~~~~~~~~~~~lG~~~~~~~~~~-----------~~wr~~f~~~~~~~~ 142 (420)
+++.+.+.. ...++..++.+|+. ++++|.+..++...+..+|..+++.+... .+|+..+.+.+++++
T Consensus 116 ~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~ 194 (444)
T PRK09669 116 YILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGV 194 (444)
T ss_pred HHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 467777777 55555889999998 45889998888887777777666543322 168888777776665
Q ss_pred cc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhc
Q psy6665 143 IP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLA 221 (420)
Q Consensus 143 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (420)
+. ...++..+++.++. + +++.+..+..+..++ ++.++. .....++....
T Consensus 195 v~~~~~~~~~~e~~~~~-----------------------~--~~~~~~~~~~~~~~~-n~~~~~-l~~~~~~~~~~--- 244 (444)
T PRK09669 195 VLFFCCFFMTKERYTPE-----------------------V--DNSSSVWKDLKLLLG-NSQWRI-MFIFNVVLLTA--- 244 (444)
T ss_pred HHHHHHhCCeEEecCCC-----------------------C--cCCCCHHHHHHHHhC-CchHHH-HHHHHHHHHHH---
Confidence 54 11122222211000 0 000111223333333 333222 22221111111
Q ss_pred chhhHHHhHHHHHHhh-CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHHHH
Q psy6665 222 GIYITIFYAVQFLEDM-GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIPVF 287 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~~~ 287 (420)
........+.+.+.. +.+...........+..+++.++.++++||+|+|+.+..+... .+.....
T Consensus 245 -~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (444)
T PRK09669 245 -VVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIF 323 (444)
T ss_pred -HHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHH
Confidence 111112222222221 2222333344455577788889999999999999887655543 1111122
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCC-------hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFP-------LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
......+.......+..+++.+|..+ .+..|..+|..++...+|..+++.+.|.+.+..|
T Consensus 324 ~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 324 ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22222233333445677788888875 2334677899999999999999999999999877
No 103
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=3.4e-17 Score=144.01 Aligned_cols=336 Identities=13% Similarity=0.094 Sum_probs=217.3
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhh-HHHHHHHHHHHHhHHHHHhhccccccchhHHHHHHHHHHhh
Q psy6665 6 NVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSG-LGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~G~~~~ 83 (420)
+.+..+.++..+-.++-+|. |.++|+.|+||..+... .+..++.+...+... .-.+...++++++..++..
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~-------~s~~~~~l~~~il~~i~~~ 130 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP-------GSYLLLLLLFLILASIGFE 130 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC-------CchHHHHHHHHHHHHHhcc
Confidence 44556666666666777777 99999999776655544 444444444443300 0112223344588888888
Q ss_pred cccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----------------------hhHHHHHhHhhhc
Q psy6665 84 AMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----------------------HWRTVAWLSLAYI 141 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----------------------~wr~~f~~~~~~~ 141 (420)
...+...+++.+..++++-++..+.-.....+|..+.-...... .-|..+.+.++..
T Consensus 131 -~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~ 209 (438)
T COG2270 131 -FSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWW 209 (438)
T ss_pred -hhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHH
Confidence 77777999999999999989888887777777766655443111 2455555555554
Q ss_pred ccc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHh
Q psy6665 142 LIP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQL 220 (420)
Q Consensus 142 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (420)
++. .|.++..++..... ....+.. ...-++-+.+.++.++ ++-+..++...+...
T Consensus 210 li~~iPm~~~v~~~~~~~--------------~~~~~~l----~~g~k~L~~t~k~i~~------~~~i~~FLiA~~~~~ 265 (438)
T COG2270 210 LLFALPMILNVHDAEKIS--------------SPPPTAL----RNGFKELKSTFKEIRG------RKNLVLFLIARFFYI 265 (438)
T ss_pred HHHHhHHHhccccccccc--------------ccchHHH----HHHHHHHHHHHHHHhc------ccchHHHHHHHHHHH
Confidence 444 33333332221100 0000000 0000111222333322 223333444445555
Q ss_pred cchhhHHHhHHHHHH-hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHH
Q psy6665 221 AGIYITIFYAVQFLE-DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVF 287 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~ 287 (420)
.+..........|.. +.|+ ..+.........+..++|+++.|++.||+|.|+++..+.++ ......+
T Consensus 266 DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~ 345 (438)
T COG2270 266 DGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFW 345 (438)
T ss_pred hhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHH
Confidence 567788888888887 4488 78888888999999999999999999999999888877776 2222233
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
...++.+.+..+....+-++..+++|+++.++.+|+++..++..++++|...+.+.+.+|+.+..+..+.++..++.++.
T Consensus 346 i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 346 ILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 33344444445567777799999999999999999999999999999999999999999966666666666666666554
Q ss_pred hhccccC
Q psy6665 368 YIFLPET 374 (420)
Q Consensus 368 ~~~~~~~ 374 (420)
..+|+.
T Consensus 426 -~~v~~~ 431 (438)
T COG2270 426 -LRVKVP 431 (438)
T ss_pred -EeecCC
Confidence 345544
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.78 E-value=1.5e-16 Score=148.19 Aligned_cols=128 Identities=13% Similarity=0.053 Sum_probs=101.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhh-cchhHHHHhhHHHHHHHHHHHHh---HHHHHhhccccccchhHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTY-GRRSLTMFSGLGMAVCMTTSGYY---TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~ 76 (420)
|.+..+.....+.+.....+++++ |+++||+ |||++++++.++..++.++++.. ...+.+.. .
T Consensus 41 gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l------------~ 108 (493)
T PRK15462 41 KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSL------------A 108 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHH------------H
Confidence 566677777888888888889999 9999999 99999999999999988766543 12233333 4
Q ss_pred HHHHHhhcccchhhhhhhhhccCcc--chhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcc
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPD--LRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYIL 142 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~--~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~ 142 (420)
+.++|.| ...+...++++|.+|++ +|..+.++...+.++|..++|.+.+.+ ||++.|.+.++..+
T Consensus 109 li~iG~G-~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~ 179 (493)
T PRK15462 109 IIVCGYG-LFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMI 179 (493)
T ss_pred HHHHhcc-cccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHH
Confidence 5556666 55565788999999875 699999999999999999999998887 89999988765443
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.77 E-value=1.3e-16 Score=143.54 Aligned_cols=342 Identities=12% Similarity=0.059 Sum_probs=182.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHH--HHHHHHHhHHHHHhhccccccchhHHH-HHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAV--CMTTSGYYTQLIMTGQIEKSLIPVFCI-LFY 77 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~l 77 (420)
|.+..+...++++..+...+.+++ |.++||+|.||-++.......+ +.+.. +.+.-++-.. ....+.+ .+.
T Consensus 39 GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~-~v~~pll~~n----~~lg~iig~i~ 113 (412)
T PF01306_consen 39 GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFI-YVFGPLLQSN----FWLGAIIGGIY 113 (412)
T ss_dssp ---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHH-HTHHHHHHTT-----HHHHHHTTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH----HHHHHHHHHHH
Confidence 567788899999999999999999 9999999977765544332221 21111 0111122222 0000000 022
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh---hhHHHHHhHhhhcccc-ccceeeecC
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL---HWRTVAWLSLAYILIP-SPVWLLNKG 153 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~---~wr~~f~~~~~~~~~~-~~~~l~~~~ 153 (420)
.|+... ...+..-+++.++. ++.+.-.|-.-...++|.+++..+++.+ +-+..||+....+++. ...++.+++
T Consensus 114 l~~~f~-~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 114 LGLVFN-AGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp TTTTTT-THHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred HHHHHc-ccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 222222 22222334443333 2223334445556666666666666655 4456666555443332 001111111
Q ss_pred cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 154 RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
+.++.+ . .+....++++.+.++..+ .++.+.++.+.+......+.+..+-...+.|
T Consensus 191 ~~~~~~------------~---------~~~~~~~~~~~~~~~~~~---l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y 246 (412)
T PF01306_consen 191 VPPQAE------------V---------ADALGAKKDKVSLKDVLS---LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIY 246 (412)
T ss_dssp SSSSS-------------S---------STTSSS------HHHHHH---HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cchhhh------------h---------hcccccCCCCCcHHHHHH---HhcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111000 0 111111222333444443 1122223333332222222244444445555
Q ss_pred HHhh----CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHh
Q psy6665 234 LEDM----GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISV 297 (420)
Q Consensus 234 ~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~ 297 (420)
+... +. ....+...+...+.+++...+..++.+|+|.|+.++++..+ ++.+.+...-.+-+.-.
T Consensus 247 ~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 247 FASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEF 326 (412)
T ss_dssp HHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHH
T ss_pred HHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 5542 33 33456677778889999999999999999999999888777 22222322222222221
Q ss_pred hchhhHHHHHhcccCChhhhhhhHHHH-HHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 298 IGMLSIPWTMTAEIFPLEIRGIAQGLT-FCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 298 ~~~~~~~~~~~~~~~p~~~r~~~~g~~-~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
........-|+.+.+|++..++...+. +....++..+.+.+.|.+.|+.| +...+++.+.+.+...++..+.+++.++
T Consensus 327 ~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 327 PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 122233358999999999999999885 57788999999999999999999 8888999888888877777776655443
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.76 E-value=4.4e-17 Score=152.91 Aligned_cols=313 Identities=16% Similarity=0.146 Sum_probs=195.7
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHH----hhcchhHH-HHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLR----TYGRRSLT-MFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~ 74 (420)
|.+.........+.-+-.++..|+ |.++| |+||||.. +.+.+..+++.+++... ....- ...........
T Consensus 33 gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~---~~~~~~~~~~~ 109 (428)
T PF13347_consen 33 GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS---FTAKLVWLFVF 109 (428)
T ss_pred CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh---hhhHHHHHHHH
Confidence 455566666666777777777788 99999 89975554 45777777776665532 10000 00011222334
Q ss_pred HHHHHHHhhcccchhhhhhhhhccC-ccchhhhHhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHhHhhhcc
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVAR-PDLRGALICIGPSITSLGMVIVYALGAVL-----------HWRTVAWLSLAYIL 142 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------~wr~~f~~~~~~~~ 142 (420)
+++..++.. ....+..++..|+.+ +++|.+..+....+..+|.++...+...+ +|++..++.+++.+
T Consensus 110 ~~l~~~~~t-~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 110 YILFDIAYT-FVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHhhh-hccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 477789999 777779999999998 47899999999888888886555444432 58988888888777
Q ss_pred cc-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhc
Q psy6665 143 IP-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLA 221 (420)
Q Consensus 143 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (420)
+. ...+...|++.++. ++.+++.+-++..++.++ ++.++ .......+. ..
T Consensus 189 v~~~i~~~~~ke~~~~~-----------------------~~~~~~~~~~~~~~~~~~-nr~~~-~l~~~~~~~----~~ 239 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEV-----------------------TEQEKKISLRDSLRSLFR-NRPFR-ILLLAFFLQ----WL 239 (428)
T ss_pred HHhhhhhheeeeccccc-----------------------cccccccccccchhhhcc-cchHH-HHHHHHHHH----Hh
Confidence 66 11222222200000 000111111223333333 32222 222222222 22
Q ss_pred chhhHHHhHHHHHHhh-CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h--hHHHHH
Q psy6665 222 GIYITIFYAVQFLEDM-GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K--SLIPVF 287 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~--~~~~~~ 287 (420)
.........+.+.+.. +.+...+.......+..+++.++.++++||+|+|+.+..+..+ . +.....
T Consensus 240 ~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (428)
T PF13347_consen 240 AFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVL 319 (428)
T ss_pred hhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 2333444555555554 4445566667778889999999999999999999988877776 2 233333
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCCh-------hhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFPL-------EIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p~-------~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
......+..........+++.+|+.+. +..|..+|+.++...++..+++.+.+.+.+..|
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 333333333334456777888888763 345889999999999999999999999988776
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.76 E-value=1.2e-15 Score=140.00 Aligned_cols=328 Identities=13% Similarity=0.116 Sum_probs=192.5
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhc-chhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYG-RRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
|.|..+.....++..+..++++++ |.++||++ +|+.+.+..++.++........ ++.+++.- ++
T Consensus 33 G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~------------~l 100 (400)
T PF03825_consen 33 GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIM------------LL 100 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HH
Confidence 557788899999999999999999 99999987 4777767666666655444444 66555555 67
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHH-----Hhhhhhh---HHHHHhHhhhcccccccee
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYA-----LGAVLHW---RTVAWLSLAYILIPSPVWL 149 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~-----~~~~~~w---r~~f~~~~~~~~~~~~~~l 149 (420)
..+... ...+...++..+...+ +++-.+-.-...++|..++.. +....++ ...+++.+...++....-+
T Consensus 101 ~~~~~~-p~~pl~dsi~~~~~~~--~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l 177 (400)
T PF03825_consen 101 FSFFFS-PTMPLSDSIALSYLGD--RGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL 177 (400)
T ss_pred HHHHHc-cHHHHHHHHHHHHccc--ccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH
Confidence 777777 6666677777777752 333344444444454444432 2222222 2344444433322200000
Q ss_pred eecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHh
Q psy6665 150 LNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFY 229 (420)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (420)
..++.+.+. + .+...++....+..++++ +++.. .+++..+...........|
T Consensus 178 ~lp~~~~~~--------------~--------~~~~~~~~~~~~~~~llk-~~~~~-----~Fll~~~l~~~~~~~~~~f 229 (400)
T PF03825_consen 178 FLPKTPPKR--------------S--------AKESVKKLLGLDALKLLK-NPRFL-----VFLLAAFLIGISHAAYYTF 229 (400)
T ss_pred hCCCCcccc--------------c--------cCCCcccccchHHHHHhc-CccHH-----HHHHHHHHHHHHHHHHHHH
Confidence 001110000 0 000000001111223333 32222 2222222222235567788
Q ss_pred HHHHHHhhC-C-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hhHHHHHHHHHH---
Q psy6665 230 AVQFLEDMG-S-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KSLIPVFCILFY--- 292 (420)
Q Consensus 230 ~~~~~~~~g-~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~~~~~~~~~~~--- 292 (420)
.+.|+++.| . ....+.......+.+++.....+++.+|+|.|+++.++... +++.........
T Consensus 230 ~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~ 309 (400)
T PF03825_consen 230 FSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQL 309 (400)
T ss_pred HHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh
Confidence 899999986 6 55667677788899999999999999999999999988877 111111111111
Q ss_pred -HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHH-HHHHHHHHHHhHHHHHhcCcchH------HHHHHHHHHHHHH
Q psy6665 293 -VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLA-HILMFFALQYYPWFKDSVGGSAM------VQWFFALISVISI 364 (420)
Q Consensus 293 -~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~-~~~~~~~~~~~g~l~~~~g~~~~------~~~~~~~~~~~~~ 364 (420)
-+............++.+..|++.|+++.++++... .+|..++..+.|++.|+.| ... .+.+.+++.++..
T Consensus 310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g-~~~~~~~~~~~~v~a~~~~~~~ 388 (400)
T PF03825_consen 310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG-ARGMFDWSAVFLVFAVMALVIL 388 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-chhhhhHHHHHHHHHHHHHHHH
Confidence 121111234455689999999999999999988864 6899999999999999988 443 2333444444444
Q ss_pred HHhhhcccc
Q psy6665 365 VYVYIFLPE 373 (420)
Q Consensus 365 ~~~~~~~~~ 373 (420)
++.+++.||
T Consensus 389 ~~f~~~fk~ 397 (400)
T PF03825_consen 389 VLFVILFKP 397 (400)
T ss_pred HHHHhhccC
Confidence 444344443
No 108
>PRK11462 putative transporter; Provisional
Probab=99.75 E-value=8.2e-16 Score=144.95 Aligned_cols=309 Identities=12% Similarity=0.077 Sum_probs=174.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHh----hcch-hHHHHhhHHHHHHHHHHHHhHHHHHhhccccc-cchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRT----YGRR-SLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKS-LIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~ 74 (420)
|.+.......+.+.-+--++.-|+ |.++|| +||| +.++++.+..+++.+++..... -.... .+.+...
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~-----~s~~~~~~y~~~~ 115 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD-----LSMNGKMIYAAIT 115 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCC-----CCcchHHHHHHHH
Confidence 556666777777777778888899 999995 7985 5555576777776554432210 00011 2233345
Q ss_pred HHHHHHHhhcccchhhhhhhhhccC-ccchhhhHhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHhHhhhcc
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVAR-PDLRGALICIGPSITSLGMVIVYALGAVL-----------HWRTVAWLSLAYIL 142 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------~wr~~f~~~~~~~~ 142 (420)
+++..++.. +...+-.++..|..+ ++||++..++...+..+|..+++.+...+ +|+....+.+++.+
T Consensus 116 ~~~~~~~~t-~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 116 YTLLTLLYT-VVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHH-HHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 677788888 777778999999998 68899999999999888877776554322 47776666666554
Q ss_pred ccc-cceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhc
Q psy6665 143 IPS-PVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLA 221 (420)
Q Consensus 143 ~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (420)
+.. ..+...|++.++ + +++.+.++..+..++ ++.+ +.......+.......
T Consensus 195 i~~~i~~~~~kE~~~~------------------------~--~~~~~~~~~l~~~~~-Nk~~-~~l~~~~~~~~~~~~~ 246 (460)
T PRK11462 195 MMLAFCFFTTKERVEA------------------------P--PTTTSMREDLRDIWQ-NDQW-RIVGLLTIFNILAVCV 246 (460)
T ss_pred HHHHHHHhcceeccCC------------------------C--ccCCCHHHHHHHHhC-ChHH-HHHHHHHHHHHHHHHH
Confidence 431 111111211100 0 000001122233332 2222 2222222222221111
Q ss_pred chhhHHHhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hh-HHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KS-LIPVFC 288 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~-~~~~~~ 288 (420)
......|...|.. +.+...........+..+++.+++++++||+++|+....+... .. ......
T Consensus 247 -~~~~~~y~~~y~~--g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (460)
T PRK11462 247 -RGGAMMYYVTWIL--GTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFV 323 (460)
T ss_pred -HHhHhhhhhhhhc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHH
Confidence 1222223333321 3322334455666788889999999999999999876533221 11 111111
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCC-------hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFP-------LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
..+..+.......+..+++..|..+ .+..|..++...+...++..+++.+.|.+.+..|
T Consensus 324 ~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 324 FIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1112222222234455677777654 2333555677778999999999999999888766
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.75 E-value=6.8e-16 Score=145.82 Aligned_cols=308 Identities=11% Similarity=0.047 Sum_probs=169.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhh----cchhHH-HHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTY----GRRSLT-MFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~----Grr~~l-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 75 (420)
|.+............+..++..++ |+++||. |||+.+ +.+.+...+..++....... .-...........+
T Consensus 40 gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 116 (448)
T PRK09848 40 GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD---WSHSSKVVYAYLTY 116 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCC---CCcchHHHHHHHHH
Confidence 566777888888999999999999 9999996 777655 55555454444332110000 00001112223345
Q ss_pred HHHHHHhhcccchhhhhhhhhccCc-cchhhhHhHHHHHHH-----HHHHHHHHHhhhh---------hhHHHHHhHhhh
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVARP-DLRGALICIGPSITS-----LGMVIVYALGAVL---------HWRTVAWLSLAY 140 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~~~~-----lG~~~~~~~~~~~---------~wr~~f~~~~~~ 140 (420)
++.+++.+ ...++..++..|..++ ++|.+..++-..+.+ +|..++|.++... .|+..+.+.+.+
T Consensus 117 ~~~~~~~~-~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~ 195 (448)
T PRK09848 117 MGLGLCYS-LVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMV 195 (448)
T ss_pred HHHHHHHH-HhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 77888888 6666677777777654 678888776654433 4555666655432 344333333322
Q ss_pred ccccccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHh
Q psy6665 141 ILIPSPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQL 220 (420)
Q Consensus 141 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (420)
..+. .+...+++.+ ++ .++...+..++..++ ++.++. .....+...
T Consensus 196 ~~~~--~~~~~~e~~~-------------------------~~-~~~~~~~~~~~~l~~-n~~f~~-----~~~~~~~~~ 241 (448)
T PRK09848 196 LYFI--CFKSTRENVV-------------------------RI-VAQPSLKISLQTLKR-NRPLFM-----LCIGALCVL 241 (448)
T ss_pred HHHH--HHcCcEeccC-------------------------CC-ccCCCHHHHHHHHhC-CchHHH-----HHHHHHHHH
Confidence 2221 1111111100 00 000011222333443 332222 111112122
Q ss_pred cchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHH
Q psy6665 221 AGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIP 285 (420)
Q Consensus 221 ~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~ 285 (420)
..........|.++++. |. +...........+..+++.++.+++.||+++|+.+..+..+ .+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~ 321 (448)
T PRK09848 242 ISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPV 321 (448)
T ss_pred HHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHH
Confidence 22334445566666654 55 33333333334566788899999999999999988776654 11111
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCChh-------hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFPLE-------IRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
................+...++..|..|.+ .+|...|+.+....+|..+++.+.+.+.+..|
T Consensus 322 ~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 322 ALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 111122222222223455667777877643 45899999999999999999999999888766
No 110
>KOG4686|consensus
Probab=99.75 E-value=3.4e-18 Score=141.29 Aligned_cols=306 Identities=14% Similarity=0.037 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHHHHHHHH
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
+..+..+++..-.++-+++ |++.|| +|-|..-++-.+...++-++++.. +|++..+| ++.|
T Consensus 80 kftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GR------------F~FG 147 (459)
T KOG4686|consen 80 KFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGR------------FLFG 147 (459)
T ss_pred eeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhh------------eeec
Confidence 3344455555555666778 999997 888887777777777777776654 99999999 9999
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----h-------hHH--HHHhHhhhcccccc
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----H-------WRT--VAWLSLAYILIPSP 146 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~-------wr~--~f~~~~~~~~~~~~ 146 (420)
+|.- ...++-++|..-|+..|+.+.++++..+..-+|..+-..+.+++ + -.. ............+.
T Consensus 148 IGgE-SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~sl 226 (459)
T KOG4686|consen 148 IGGE-SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSL 226 (459)
T ss_pred cCch-hhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999 77777999999999999999999999888888876544443333 1 000 00000000000000
Q ss_pred ceeeecC-cHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 147 VWLLNKG-RANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 147 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
.-..... ..+.++..+++ ++ ....+ ..+..+..++.+.++ ......+........
T Consensus 227 ical~lg~~D~rAerilh~---e~------------g~~Ge----~pkLtdv~~f~ppfw-----~~~iicv~yyva~fP 282 (459)
T KOG4686|consen 227 ICALSLGLSDDRAERILHL---EE------------GFLGE----EPKLTDVNTFYPPFW-----VLVIICVLYYVAWFP 282 (459)
T ss_pred HHHHHhhhhhhHHHHHHhh---hc------------CcccC----CcccccccccCccHH-----HHHHHHHHHHHHHHH
Confidence 0000000 01111111100 00 00000 011111111122222 222222222223556
Q ss_pred HHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 226 TIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 226 ~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
+....|.++++. |+ +..++.+.+.......+.+++.|.++||+|++...+.+..+ +.+.+...+.+.
T Consensus 283 Fi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~l 362 (459)
T KOG4686|consen 283 FITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSMTFL 362 (459)
T ss_pred HhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHHHHH
Confidence 777888998887 88 77777788888888999999999999999999777666554 233333344444
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcch
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSA 350 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~ 350 (420)
...+++- ....|..++.+.|+++.|+++|.++.+.++|-++.|.+.|.+.|+-|++.
T Consensus 363 GLsysll-AcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 363 GLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred hhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 3333322 23356788889999999999999999999999999999999999888543
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.74 E-value=4e-16 Score=141.76 Aligned_cols=310 Identities=15% Similarity=0.168 Sum_probs=194.0
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHh----hcc-hhHHHHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRT----YGR-RSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr----~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 75 (420)
|.+.......+.+.=+--++.-|+ |.++|| +|| ||.++.+.+..++.+.++..+.. .-....+......|
T Consensus 44 Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~----~~~~~k~~ya~vtY 119 (467)
T COG2211 44 GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPD----FSMTGKLIYALVTY 119 (467)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCC----cccCcchHHHHHHH
Confidence 455555566666666666777788 999994 887 55666677777777766654300 00113444555577
Q ss_pred HHHHHHhhcccchhhhhhhhhccC-ccchhhhHhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHhHhhhccc
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVAR-PDLRGALICIGPSITSLGMVIVYALGAVL-----------HWRTVAWLSLAYILI 143 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~-~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------~wr~~f~~~~~~~~~ 143 (420)
.+.+++.. ....+-.++.+|+.+ ++||.+..++-+.+.++|.++...+...+ ||+....+.++++++
T Consensus 120 ~l~~l~YT-~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 120 MLLGLGYT-LVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHH-heeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 99999999 777779999999987 58899999999999999977666555433 688777777777665
Q ss_pred c-ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHH----HHHhhccccchHHHHHHHHHHHH
Q psy6665 144 P-SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARL----IKMVTMATGIKPLLVITVLFALQ 218 (420)
Q Consensus 144 ~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 218 (420)
. ...+...|+|..++ ...+++.+.+++ ..++ ++.++.... .. ++
T Consensus 199 ~~l~~~~~v~ER~~~~-------------------------~~~~~~~~~~~~~~~~~~~~-Nrp~~~~l~-~~----l~ 247 (467)
T COG2211 199 LLLFCFFNVKERVVET-------------------------QPTKTGVKLKLKDSFLLIFK-NRPLLLLLL-MN----LL 247 (467)
T ss_pred HHHHHHHHhhcccCcc-------------------------ccCcccccccHHHHHHHHHc-cchHHHHHH-HH----HH
Confidence 4 11222222222111 000111122233 3333 333332222 11 12
Q ss_pred HhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hhHH
Q psy6665 219 QLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KSLI 284 (420)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~~~ 284 (420)
...+..........|.+.. |. ...............+++.++..++.+|+|+|++...+.++ .+..
T Consensus 248 ~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~ 327 (467)
T COG2211 248 LFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSV 327 (467)
T ss_pred HHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcch
Confidence 2222333333444444432 44 44555666666777777799999999999999999888776 1222
Q ss_pred HHHHHH-HHHHHHhhchhhHHHHHhcccCC-------hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 285 PVFCIL-FYVAISVIGMLSIPWTMTAEIFP-------LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 285 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p-------~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
.+.+.. ...........++.|++++|..+ .+..|...|...++..+|.+++..+.|++.+..|
T Consensus 328 ~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 328 VLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222222 22222233346788899998853 3445888999999999999999999999998877
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.74 E-value=3.1e-16 Score=139.78 Aligned_cols=250 Identities=13% Similarity=0.117 Sum_probs=165.3
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh--------------------hhHHHH
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL--------------------HWRTVA 134 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~--------------------~wr~~f 134 (420)
+++.|.|.+ ...+..+.++++..|+|++.+.+++.+..+++|..++|.++..+ +|+++|
T Consensus 17 ~f~~g~G~~-~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y 95 (310)
T TIGR01272 17 LFVLASGLT-ILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPY 95 (310)
T ss_pred HHHHHhhHH-HHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHH
Confidence 399999999 99999999999999999999999999999999999999988742 589999
Q ss_pred HhHhhhccccccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHH
Q psy6665 135 WLSLAYILIPSPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVL 214 (420)
Q Consensus 135 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (420)
++.+.+.++....+...+.+..+. ++ . ++..+++ ..+.++.++ ++..+...+
T Consensus 96 l~ia~~~~~~~i~~~~~~~p~~~~---------~~--~---------~~~~~~~--~~~~~~~~~------~~~~~l~~~ 147 (310)
T TIGR01272 96 LLLAGALAVLAIIFAFLPLPELQE---------AD--V---------ARVSSGD--TTQKTSAFQ------FTHLVLGAL 147 (310)
T ss_pred HHHHHHHHHHHHHHHHccCCCCCc---------cc--c---------ccccccc--ccchhhHHh------hHHHHHHHH
Confidence 866555443311111111100000 00 0 0000000 000011111 222333334
Q ss_pred HHHHHhcchhhHHHhHHHHHHhh---CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------
Q psy6665 215 FALQQLAGIYITIFYAVQFLEDM---GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------- 280 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------- 280 (420)
..+...........|.+.|+.+. |+ +.+.+........+.++|+++.+++.||+++|+.+..+..+
T Consensus 148 ~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~ 227 (310)
T TIGR01272 148 GIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL 227 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445667888999999753 67 77788888999999999999999999999998887666544
Q ss_pred -hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHH
Q psy6665 281 -KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFA 357 (420)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~ 357 (420)
....... .....+++.....|...+...+.+|++ .+++.++. ....+|+.+.|.+.|.+.|..| ....+++..
T Consensus 228 ~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v~~ 301 (310)
T TIGR01272 228 THGYVAMW-FVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFALPV 301 (310)
T ss_pred cCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHHHH
Confidence 1111122 222233333345677777888877754 45666765 5678999999999999999988 777766433
No 113
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.74 E-value=9.6e-17 Score=151.33 Aligned_cols=319 Identities=13% Similarity=0.048 Sum_probs=185.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHhhc-----chhHHHHhhHHHH-HHHHHHHHh---HHHHHhhccccccchh
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYG-----RRSLTMFSGLGMA-VCMTTSGYY---TQLIMTGQIEKSLIPV 71 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~---~~~~~~~r~~~~~~~~ 71 (420)
+|.|.++.....+...+...+-.+.|+++||++ ||+.++++.++.+ ++....+.. .....+..
T Consensus 56 lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~-------- 127 (468)
T TIGR00788 56 LGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFI-------- 127 (468)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHH--------
Confidence 366777777777888888887655599999998 7888888776653 332222221 22223355
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHH---HHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc
Q psy6665 72 FCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGP---SITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 72 ~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~---~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~ 144 (420)
++.+++.+ ...++...+..|..+ |++....+... ...++|.++++.+++.+ +||..|++.+.+.++.
T Consensus 128 ----~l~~~~~a-~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~ 201 (468)
T TIGR00788 128 ----FLAALAKA-LYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQ 201 (468)
T ss_pred ----HHHHHHHH-HHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHH
Confidence 88999999 888889999999998 55544433333 33346777777776654 8999998887776665
Q ss_pred ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHh--hccccchHHHHHHHHHHHHHhcc
Q psy6665 145 SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMV--TMATGIKPLLVITVLFALQQLAG 222 (420)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 222 (420)
...++..++++++... +.++.+..... . .........++..++.++ .++..++.....++.+. ...
T Consensus 202 ~~~~~~~~E~~~~~~~---~~~~~~~~~~~----~--~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~--~~~- 269 (468)
T TIGR00788 202 LFVSNLSKERRAFVRP---RIGTYLEMNMA----L--LTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYA--NLP- 269 (468)
T ss_pred HHHHHhcccccccccc---cccccchhhhh----h--hhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHh--hcC-
Confidence 1112222222100000 00000000000 0 000000001111222222 02222221111111011 111
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccch------------hH------
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIEK------------SL------ 283 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~------------~~------ 283 (420)
......+. ......|+ +...+......+++.+++..+.+.+.+|++.|+.+.++.++. .+
T Consensus 270 ~~~~~~f~-~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi 348 (468)
T TIGR00788 270 GASGSVFC-ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGI 348 (468)
T ss_pred CCCceeEE-EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCC
Confidence 11111111 11123477 888898988899999999999999999999999888776650 00
Q ss_pred ----HHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 284 ----IPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 284 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
.......+..........+. ..++.+..|++.+|+.+++.+.+.++|..+++.+.+.+.++.|
T Consensus 349 ~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 349 SDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 01111122223333344444 5888999999999999999999999999999999999998877
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.56 E-value=1.6e-11 Score=108.90 Aligned_cols=311 Identities=13% Similarity=0.059 Sum_probs=181.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhc-----chhHHHH-hhHHHHHHHHHHHHhHHHHHh-hc----ccc-ccchhHH
Q psy6665 6 NVYLATVLVGVVRMVFGLLTSQLLRTYG-----RRSLTMF-SGLGMAVCMTTSGYYTQLIMT-GQ----IEK-SLIPVFC 73 (420)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~g~l~dr~G-----rr~~l~~-~~~~~~~~~~~~~~~~~~~~~-~r----~~~-~~~~~~~ 73 (420)
......+++..+-...-..+|+.+|+.+ ||..+++ |.++...+..+..++.+.+-- .. ..+ +......
T Consensus 15 ~lv~~lval~~~~ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l 94 (403)
T PF03209_consen 15 WLVALLVALHYLVAPLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAAL 94 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHH
Confidence 3344555555555554333399999999 8876666 666666666655555221111 00 112 2234445
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHh--hhcccc--
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSL--AYILIP-- 144 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~--~~~~~~-- 144 (420)
.|.+.|+|.+ .......++++|..|+|+|+++.++.....-+|.+++..+.+.+ .-|..-.+.. ++.++.
T Consensus 95 ~F~l~G~G~~-~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ 173 (403)
T PF03209_consen 95 AFLLYGLGVH-ASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNL 173 (403)
T ss_pred HHHHHHhhHh-HhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999 77777999999999999999999999999999999998887765 2222222211 111111
Q ss_pred ccceeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchh
Q psy6665 145 SPVWLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIY 224 (420)
Q Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (420)
...|-..+++.+.. . ...+++++-+..+++++. ++.-++ .+...++... +++
T Consensus 174 ia~wg~E~r~~~~~---------------~-------~~~~~~~~f~~a~~~~~~-~~~a~~-f~~fl~l~t~----a~~ 225 (403)
T PF03209_consen 174 IALWGQEPRRSRRA---------------A-------AAERPRPPFREAWRQVWA-SPQARR-FFVFLFLGTL----AFF 225 (403)
T ss_pred HHHHhcccCCcccc---------------c-------CCCCCCccHHHHHHHHHh-CCChhH-HHHHHHHHHH----HHH
Confidence 00111111100000 0 011111112334444443 333333 2222222221 122
Q ss_pred hHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhh-ccCchhhHhhhccc-------------hhHHHHHH
Q psy6665 225 ITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLR-TYGRRSLTMFSQIE-------------KSLIPVFC 288 (420)
Q Consensus 225 ~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~g~~~~~~~~~~~-------------~~~~~~~~ 288 (420)
..-..+-+|-.+. |+ ..+........+.+.++|..+.+++.. |.++++....+... ......+-
T Consensus 226 ~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~ 305 (403)
T PF03209_consen 226 MQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFR 305 (403)
T ss_pred hhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 2333334444444 77 778888888899999999999998766 67777766555444 11122222
Q ss_pred HHHHHHHHhhchhh-HHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 289 ILFYVAISVIGMLS-IPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 289 ~~~~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
...+..+++.|... ...+..-++.+++..|..+|.....+.+...++..+.|.+.|.
T Consensus 306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~ 363 (403)
T PF03209_consen 306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDL 363 (403)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333444432 2335666788888899999999999999999999999988774
No 115
>KOG2563|consensus
Probab=99.54 E-value=1.4e-13 Score=122.13 Aligned_cols=326 Identities=14% Similarity=0.065 Sum_probs=201.5
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--------HH--HHHhhccccccchhHHHHHHH
Q psy6665 10 ATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--------TQ--LIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 10 ~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~--~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+..-+|++.+..-.++ -|+.||+|-|...+++..+.+++..+-..+ ++ ....+. .+.
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq------------~ia 150 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQ------------SIA 150 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhH------------HHH
Confidence 4444566666666677 999999999999999999999999988776 22 445677 777
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----------hhHH--HHHhHhhhcccccc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----------HWRT--VAWLSLAYILIPSP 146 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----------~wr~--~f~~~~~~~~~~~~ 146 (420)
+..+. ...........-|+|++||..+..+-..+..+|..++.++...+ .|-. .|+...++..+..+
T Consensus 151 a~Aq~-Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~ 229 (480)
T KOG2563|consen 151 AAAQP-FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLA 229 (480)
T ss_pred HHhhh-HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 77777 66664566777899999999999999999889888888877766 4654 34434433333211
Q ss_pred ceee-ecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhh
Q psy6665 147 VWLL-NKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYI 225 (420)
Q Consensus 147 ~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (420)
..+. .+++++ ..++.. .....+.+-..+.++.++ ++ .+....+........++.
T Consensus 230 l~~~~~~~~P~--------------tPps~s-----~~~~~~~~f~~si~~~~~-n~-----~F~il~~~ygi~~g~F~~ 284 (480)
T KOG2563|consen 230 LVLFVFTKKPP--------------TPPSAS-----QAALQDASFPKSIKSCFK-NR-----QFIILAICYGIGLGLFNS 284 (480)
T ss_pred HHHHhcCCCCC--------------CCCchh-----HhhhhcCcHHHHHHHHHc-Cc-----cHHHHHHHHhhhHHHHHH
Confidence 1111 111110 000000 000001111223333333 21 222222333333333555
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhh-Hhhhccc---------------hhHHHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSL-TMFSQIE---------------KSLIPVFC 288 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~-~~~~~~~---------------~~~~~~~~ 288 (420)
..+.+...+...|+ ...++.......+.+++++++.|.+.||.++-+. ..+.... ...+.+..
T Consensus 285 l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~ 364 (480)
T KOG2563|consen 285 LSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFT 364 (480)
T ss_pred HHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhh
Confidence 55555544444477 6788889999999999999999999999976443 2222211 11122333
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc---chHHHHHHHHHHHHHHH
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG---SAMVQWFFALISVISIV 365 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~ 365 (420)
.+...+.+..+..|+..-+..|..-|..-++..|+.+..+++-+.+-..+.+...+..+. +...-+.....+++..+
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~ 444 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAI 444 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHH
Confidence 344455556666777777778875556678899999999999999998888888776551 22223444555555555
Q ss_pred Hhhhcccc
Q psy6665 366 YVYIFLPE 373 (420)
Q Consensus 366 ~~~~~~~~ 373 (420)
+..++.|+
T Consensus 445 lva~~r~~ 452 (480)
T KOG2563|consen 445 LVAFFRPD 452 (480)
T ss_pred HHhhhhhh
Confidence 55444443
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.53 E-value=1.7e-12 Score=117.37 Aligned_cols=353 Identities=11% Similarity=0.020 Sum_probs=206.9
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh----HHHHHhhccccccchhHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY----TQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~ 75 (420)
|.|.+.....++.+..-.-+..++ |+++|| +|+|+++.+|.+++.+|.++.+.. ...++++-
T Consensus 57 g~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L------------ 124 (498)
T COG3104 57 GFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGL------------ 124 (498)
T ss_pred CcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHH------------
Confidence 455555555565554444455666 999999 899999999999999999888765 55667777
Q ss_pred HHHHHHhhcccchhhhhhhhhccCccc--hhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-----
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVARPDL--RGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP----- 144 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~~~~--r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~----- 144 (420)
.+.++|.| ..-+...+++.|.+|+++ |-..+++..++.++|.+++|.+.+++ ||...|...++-..+.
T Consensus 125 ~~I~iG~G-l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 125 ALIIVGTG-LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred HHHHhccc-cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 88889999 888879999999998643 77788889999999999999998887 8999998887766555
Q ss_pred -ccceeeecCcHHH--------HHHHHHHHhcchhhh----hhhHHHHhhhccchhhh---hhhhHHHHHhhcc--ccch
Q psy6665 145 -SPVWLLNKGRANQ--------ALKSLKYLARNYKEV----KNKEQELKKMNSTKENQ---SLSARLIKMVTMA--TGIK 206 (420)
Q Consensus 145 -~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~ 206 (420)
.++++......++ .......+-...... ....+.. ........ ...-..+.++.++ ..|+
T Consensus 204 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~er~ 281 (498)
T COG3104 204 LGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTF--SGVLLVISILIAIIYFAEAFRSPKVFDERR 281 (498)
T ss_pred HccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCccHHHHH
Confidence 2222211110000 000000000000000 0000000 00000000 0000000111000 1122
Q ss_pred HH------HHHHHHHHHHHhcchhhHHHhHHHHHHhh--CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCch--hh---
Q psy6665 207 PL------LVITVLFALQQLAGIYITIFYAVQFLEDM--GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR--SL--- 273 (420)
Q Consensus 207 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~--~~--- 273 (420)
+. ++...+++..+--....+..|.....+.. |+.-...+..++..+.-++.+++..++..|.+++ ..
T Consensus 282 r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~ 361 (498)
T COG3104 282 RLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTP 361 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcc
Confidence 22 22222222222223344555555544332 3455667788888888888888888877774433 11
Q ss_pred --Hhhhccc---------------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHH
Q psy6665 274 --TMFSQIE---------------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI 330 (420)
Q Consensus 274 --~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~ 330 (420)
+.++..+ .+...++...++....-....|+..+++..+.|+...+..+++.......
T Consensus 362 ~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~ 441 (498)
T COG3104 362 IKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAA 441 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 1111111 22334444455555556667888889999999999999999999888888
Q ss_pred HHHHHHHHhHH------HHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 331 LMFFALQYYPW------FKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 331 ~~~~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
++.++..+.+. ..+... ....|+..+.+.++........
T Consensus 442 ~~~l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 442 GQTLGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred HHHhhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHHHHHh
Confidence 88888777662 233333 4566666666666666555433
No 117
>TIGR00895 2A0115 benzoate transport.
Probab=99.51 E-value=2.3e-13 Score=126.71 Aligned_cols=153 Identities=17% Similarity=0.227 Sum_probs=116.6
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCI 289 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~ 289 (420)
.......+.|.+.++.|. ..+.+.......++.+++.++.|+++||+|||+.+..+..+ .+...+...
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLIL 111 (398)
T ss_pred HHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 345566677888777788 67788888888899999999999999999999988777655 222222222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.++.+.......+...++..|.+|++.|+++.++.+....+|..++|.+.+.+.+..| ++..+.+.+++.++..++...
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeehhhhhhHHHHHHHHHHH
Confidence 2232222233456677999999999999999999999999999999999999999888 888888776666666666666
Q ss_pred ccccCC
Q psy6665 370 FLPETH 375 (420)
Q Consensus 370 ~~~~~~ 375 (420)
+.||+.
T Consensus 191 ~~~~~~ 196 (398)
T TIGR00895 191 FLPESI 196 (398)
T ss_pred hCCCCC
Confidence 677654
No 118
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.49 E-value=2.1e-12 Score=120.58 Aligned_cols=170 Identities=16% Similarity=0.168 Sum_probs=128.8
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---- 280 (420)
+.......+.++.+........+..|.+.++.|. ..+.+...+...++..++.+..|++.||+|||+.+..+.++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~ 86 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA 86 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH
Confidence 4444555555555555566666777776677788 88888999999999999999999999999999998877666
Q ss_pred -------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh------cC
Q psy6665 281 -------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS------VG 347 (420)
Q Consensus 281 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~------~g 347 (420)
++...+....++.+....+..+....++.|.+|+++|+++.++.+....+|..+++.+.+++.+. .|
T Consensus 87 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 87 STATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 23333334344444444445566668889999999999999999999999999999999988752 46
Q ss_pred cchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 348 GSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
++..|.+.++..++..++.++++||+++
T Consensus 167 -wr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 167 -WQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred -hhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 8889988888877776666677777654
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.48 E-value=2.7e-15 Score=142.15 Aligned_cols=341 Identities=14% Similarity=0.085 Sum_probs=2.9
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh------H--HH-----------HH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY------T--QL-----------IM 60 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~--~~-----------~~ 60 (420)
|+.+-++.....+.+-++..+..++ .++.+|-.|-+.+-.|.++++++++++++- + .. -.
T Consensus 33 F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~ 112 (539)
T PF03137_consen 33 FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSN 112 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccc
Confidence 4556677788889999999999999 999999888899999999999999998875 1 00 00
Q ss_pred hh--------c----------cc-cc-cchhH-HHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHH
Q psy6665 61 TG--------Q----------IE-KS-LIPVF-CILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMV 119 (420)
Q Consensus 61 ~~--------r----------~~-~~-~~~~~-~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~ 119 (420)
.. + .. .+ ...++ +-=++.|+|.. ...+...+|+-|..++++-+...|+..+...+|..
T Consensus 113 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~-pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa 191 (539)
T PF03137_consen 113 LCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGAT-PLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPA 191 (539)
T ss_dssp ---------------------------------------SSS--------------------------------------
T ss_pred cccccccccccCccccccccccccchHHHHHHHHHHHHHhcccc-CCccceeeeeccccccccCccchhhhhHHhhccHH
Confidence 11 0 00 11 12222 24688999999 78888999999999999999999999999999999
Q ss_pred HHHHHhhhh--------------------------hhHHHHHhHhhhcccc-ccceeeecCcHHHHH-HHHHHHhcchhh
Q psy6665 120 IVYALGAVL--------------------------HWRTVAWLSLAYILIP-SPVWLLNKGRANQAL-KSLKYLARNYKE 171 (420)
Q Consensus 120 ~~~~~~~~~--------------------------~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 171 (420)
+|.++++.. .|-.-|++.+.+.++. .|.+.+.|+-+++.+ +..++....+.+
T Consensus 192 ~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~ 271 (539)
T PF03137_consen 192 LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEE 271 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchh
Confidence 998887764 1555666666666655 444444433322210 000000000000
Q ss_pred hhhhHHHHhhhccchhhhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHH
Q psy6665 172 VKNKEQELKKMNSTKENQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATV 248 (420)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~ 248 (420)
... .++. ++.++.+......+++.+ .++..+.+.++...+...........+..|.|.|++.. +. +.++.....
T Consensus 272 ~~~-~~~~--~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G 348 (539)
T PF03137_consen 272 DSD-KDSF--KDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTG 348 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhh-hhcc--cccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 000 0000 000000111233445544 44556677777777777777777888999999999886 66 555555554
Q ss_pred HHH-HHHHHHHHHHHHhhhccCch--hhHhhhccc---------------------------------------------
Q psy6665 249 LVG-VVRMVFGLLTSQLLRTYGRR--SLTMFSQIE--------------------------------------------- 280 (420)
Q Consensus 249 ~~~-~~~~~~~~~~g~l~d~~g~~--~~~~~~~~~--------------------------------------------- 280 (420)
... .+.++|.+++|++.+|++-+ ..+.+..+.
T Consensus 349 ~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn 428 (539)
T PF03137_consen 349 IVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCN 428 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCC
Confidence 433 36678899999999998543 222211111
Q ss_pred ----------------hh----HHHHHHHHHH-HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHH-HHHHHHHH
Q psy6665 281 ----------------KS----LIPVFCILFY-VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHI-LMFFALQY 338 (420)
Q Consensus 281 ----------------~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~-~~~~~~~~ 338 (420)
.. ....+...+. .........|. ....-..+|+++|+.+.|+...+.++ |.+-+|.+
T Consensus 429 ~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~-~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIi 507 (539)
T PF03137_consen 429 SCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPS-TLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPII 507 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccch-heeeeccCChhhcchhhhHHHHHHHhhcCcchHHH
Confidence 00 1111111111 11112222333 24455778999999999999988776 55679999
Q ss_pred hHHHHHhc
Q psy6665 339 YPWFKDSV 346 (420)
Q Consensus 339 ~g~l~~~~ 346 (420)
+|.+.|..
T Consensus 508 fG~iiD~t 515 (539)
T PF03137_consen 508 FGAIIDST 515 (539)
T ss_dssp --------
T ss_pred HhHHHhhh
Confidence 99998863
No 120
>KOG2325|consensus
Probab=99.46 E-value=1.5e-12 Score=118.99 Aligned_cols=111 Identities=10% Similarity=0.039 Sum_probs=98.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHH-HHHHHhhcc-hhHHHHhhHHHHHHHHHH-HHh------HHHHHhhccccccchhHHH
Q psy6665 4 RMNVYLATVLVGVVRMVFGLLT-SQLLRTYGR-RSLTMFSGLGMAVCMTTS-GYY------TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 4 ~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~~------~~~~~~~r~~~~~~~~~~~ 74 (420)
+.+...++++...+|.+++++. |++..|.|. |+.++.|.++..++.++. +.. -+.++++|
T Consensus 69 ~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R----------- 137 (488)
T KOG2325|consen 69 TATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVAR----------- 137 (488)
T ss_pred CcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH-----------
Confidence 4555678889999999999999 999999997 888999999999999988 443 57789999
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
++.|+|.+ .... ..+|+++....++|.++++....+..+|.++||.+...+
T Consensus 138 -~l~Gvg~~-n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 138 -ILTGVGVG-NFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred -HHcCcCcc-cHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 99999998 7666 899999999999999999999999999999999887765
No 121
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.46 E-value=2.1e-12 Score=121.57 Aligned_cols=163 Identities=11% Similarity=-0.057 Sum_probs=119.9
Q ss_pred HHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------
Q psy6665 211 ITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------- 280 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------- 280 (420)
..++..+..+........+.|.+.++.|+ ..+.+.......++..++.++.|++.||+|||+.+..+.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 106 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFG 106 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHH
Confidence 33333333333344567788898888888 77888888999999999999999999999999988777766
Q ss_pred --hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHH
Q psy6665 281 --KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFAL 358 (420)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~ 358 (420)
.+...+....+..+.......+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..| ++..+.+.++
T Consensus 107 ~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~~~f~~~~i 185 (434)
T PRK11663 107 FSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WRYGMMIAGI 185 (434)
T ss_pred HHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HHHHHHHHHH
Confidence 2222222222222222222345666888999999999999999999999999999999999999888 8888888777
Q ss_pred HHHHHHHHhhhccccC
Q psy6665 359 ISVISIVYVYIFLPET 374 (420)
Q Consensus 359 ~~~~~~~~~~~~~~~~ 374 (420)
+.++..+...+.++|+
T Consensus 186 ~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 186 IAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHHHHHHHHHcCCC
Confidence 7666555544555554
No 122
>KOG3626|consensus
Probab=99.44 E-value=1.3e-12 Score=124.18 Aligned_cols=256 Identities=14% Similarity=0.060 Sum_probs=172.5
Q ss_pred cchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--------HHHHH---------------
Q psy6665 5 MNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--------TQLIM--------------- 60 (420)
Q Consensus 5 ~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~--------------- 60 (420)
-+......+.+-+|..+...+ .+..-|.-|-+++-+|.++++++++++++- +..-.
T Consensus 131 Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~ 210 (735)
T KOG3626|consen 131 SSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFC 210 (735)
T ss_pred CCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchh
Confidence 333444456677788888888 999999999999999999999999999875 11111
Q ss_pred -------hhcc--------ccc----cchhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHH
Q psy6665 61 -------TGQI--------EKS----LIPVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIV 121 (420)
Q Consensus 61 -------~~r~--------~~~----~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~ 121 (420)
..|. +.+ +..+++--++.|+|.. ...+...+|+-|...+++-+..+|+..+...+|.++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T-pi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiG 289 (735)
T KOG3626|consen 211 CCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT-PIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIG 289 (735)
T ss_pred hccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC-CCccCCCccccccccccCCcHHHHHHHHHHHhhhHHH
Confidence 0110 011 1222234688999999 7788899999999999999999999999999999999
Q ss_pred HHHhhhh-----------------------hhHHHHHhHhhhcccc-ccceeeecCcHHHHHH-HHHHHhcchhhhhhhH
Q psy6665 122 YALGAVL-----------------------HWRTVAWLSLAYILIP-SPVWLLNKGRANQALK-SLKYLARNYKEVKNKE 176 (420)
Q Consensus 122 ~~~~~~~-----------------------~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 176 (420)
.+++.++ .|..-|++.+.+.++. .|.+.+.++.+++.++ ...+.+..+.+.
T Consensus 290 fllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~---- 365 (735)
T KOG3626|consen 290 FLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTES---- 365 (735)
T ss_pred HHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhccccccc----
Confidence 9988876 3777788887777766 5666665554433221 000000000000
Q ss_pred HHHhhhccchhhhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHH-H
Q psy6665 177 QELKKMNSTKENQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVG-V 252 (420)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~-~ 252 (420)
+..+++.+.....+++.+ .++....++++...+........+..+..|+|.|++.. |. +..+..+..... -
T Consensus 366 -----~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp 440 (735)
T KOG3626|consen 366 -----GGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVP 440 (735)
T ss_pred -----ccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhh
Confidence 001111112233444444 34455567777777777788778899999999999886 77 666666664444 4
Q ss_pred HHHHHHHHHHHhhhccCc
Q psy6665 253 VRMVFGLLTSQLLRTYGR 270 (420)
Q Consensus 253 ~~~~~~~~~g~l~d~~g~ 270 (420)
+..+|.+++|++..|+.-
T Consensus 441 ~~~~Gi~lGG~iikkfkl 458 (735)
T KOG3626|consen 441 AAAVGIFLGGLIIKKFKL 458 (735)
T ss_pred hhhhhhhccceeeeeecc
Confidence 456788899999999853
No 123
>PRK10054 putative transporter; Provisional
Probab=99.44 E-value=5.9e-12 Score=116.82 Aligned_cols=153 Identities=11% Similarity=0.128 Sum_probs=113.2
Q ss_pred hcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHH
Q psy6665 220 LAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPV 286 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~ 286 (420)
..+.+....+.|.++++. |+ ..+.+.......+..+++.++.|+++||+|||+.+..+... ++....
T Consensus 20 ~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (395)
T PRK10054 20 TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLV 99 (395)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 334666777888888654 88 78888889988999999999999999999999988766654 222222
Q ss_pred HHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 287 FCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
...............+...++..|..|++.|+++.|+.+...++|..++|.+.+.+.+ .| ++..+.+.+++.++..+.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~~~~~~~i~~i~ 177 (395)
T PRK10054 100 VLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWLAAICSAFPLVF 177 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHHHHHHHHHHHHH
Confidence 2222222222223355566888999999999999999999999999999999998875 56 888888877777776555
Q ss_pred hhhccccC
Q psy6665 367 VYIFLPET 374 (420)
Q Consensus 367 ~~~~~~~~ 374 (420)
..+..|+.
T Consensus 178 ~~~~~~~~ 185 (395)
T PRK10054 178 IQIWVQRS 185 (395)
T ss_pred HHHHHhcc
Confidence 55555544
No 124
>PRK03545 putative arabinose transporter; Provisional
Probab=99.44 E-value=8.3e-12 Score=115.93 Aligned_cols=149 Identities=13% Similarity=0.067 Sum_probs=116.0
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
......|.+.++.|. +.+.+.......++..++.+..|.+.||+|||+.+..+..+ ++...+....+.
T Consensus 27 ~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 106 (390)
T PRK03545 27 VPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIG 106 (390)
T ss_pred HHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 344456888788788 88888888888899999999999999999999998887665 233333333333
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
.+.......+...+++.|.+|+++|+++.|+......++..++|.+.+.+.+..| ++..+++.++++++..+..+...|
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~l~~~~~~~~~~ 185 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WRTTFLAIGGGALITLLLLIKLLP 185 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3333333456666888999999999999999999999999999999999999888 899999988888777666655566
Q ss_pred cC
Q psy6665 373 ET 374 (420)
Q Consensus 373 ~~ 374 (420)
+.
T Consensus 186 ~~ 187 (390)
T PRK03545 186 LL 187 (390)
T ss_pred CC
Confidence 54
No 125
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.44 E-value=3.7e-12 Score=118.14 Aligned_cols=154 Identities=16% Similarity=0.159 Sum_probs=117.8
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCI 289 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~ 289 (420)
+........|.+.++.|. +.+.+.......++..++.++.|++.||+|||+.+..+..+ ++.......
T Consensus 20 ~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (385)
T TIGR00710 20 GIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVL 99 (385)
T ss_pred HHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 344455566777777788 78888899999999999999999999999999988877655 222222222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.++.+.......+...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+..+ ++..+.+.+++.++..+..+.
T Consensus 100 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 100 RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHH
Confidence 2222222223345666889999999999999999999999999999999999999888 888888888777777766666
Q ss_pred ccccCCC
Q psy6665 370 FLPETHG 376 (420)
Q Consensus 370 ~~~~~~~ 376 (420)
..||+++
T Consensus 179 ~~~~~~~ 185 (385)
T TIGR00710 179 ILPETLP 185 (385)
T ss_pred hCCCCCC
Confidence 6666543
No 126
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1e-11 Score=110.89 Aligned_cols=165 Identities=14% Similarity=0.116 Sum_probs=139.4
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---- 280 (420)
.+.+......+ ......+...-.+|++.+|.+. ...++...+.++++..++.++...+.||+.||++++..+.+
T Consensus 13 ~~l~aLa~~~F-~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 13 LALLALALAAF-AIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHH-HHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 33333333333 3333467788889999999999 88899999999999999999999999999999998887776
Q ss_pred -------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHH
Q psy6665 281 -------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQ 353 (420)
Q Consensus 281 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~ 353 (420)
.++..+...-+..+.....+.++..+...++.|+++|+++.++......+...++.++..++-|..| |+..|
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G-WR~~F 170 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG-WRATF 170 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-HHHHH
Confidence 4455555555566666666788888999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHhhhccc
Q psy6665 354 WFFALISVISIVYVYIFLP 372 (420)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~ 372 (420)
+..++++++..+..+..+|
T Consensus 171 ~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 9999999999999998998
No 127
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.43 E-value=2e-12 Score=120.27 Aligned_cols=152 Identities=13% Similarity=0.074 Sum_probs=118.2
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILF 291 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~ 291 (420)
.......|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+ .+...+....+
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRV 90 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 4455566776666688 78888999999999999999999999999999988776655 22333333333
Q ss_pred HHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 292 YVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
+.+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+ ++..+.+.+++.++..+..++..
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 169 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIWGVLWLKFI 169 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHHHHhhhee
Confidence 33333334466677899999999999999999999999999999999999999888 88888888887777776666666
Q ss_pred ccCCC
Q psy6665 372 PETHG 376 (420)
Q Consensus 372 ~~~~~ 376 (420)
|++++
T Consensus 170 ~~~~~ 174 (399)
T TIGR00893 170 PDPPQ 174 (399)
T ss_pred cCCCC
Confidence 66543
No 128
>KOG2816|consensus
Probab=99.43 E-value=3.4e-12 Score=118.15 Aligned_cols=299 Identities=13% Similarity=0.058 Sum_probs=179.8
Q ss_pred HHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHHHHhhcccchhhhhh
Q psy6665 16 VVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVY 93 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 93 (420)
.+...+.++. |.++||+|||..+....+...+..+...+. +|.++ .- -+.|...+ .... ..++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~-~~------------~l~g~~~~-~~s~-~~a~ 136 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL-LL------------GLSGGFSA-IFSV-GFAY 136 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh-hc------------ccccchhh-hhhh-hhhh
Confidence 4455667777 999999999999999999999988888877 55444 22 34444444 4444 8999
Q ss_pred hhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecCcHHHHHHHHHHHhcc
Q psy6665 94 ITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKGRANQALKSLKYLARN 168 (420)
Q Consensus 94 i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~ 168 (420)
++|....++|....++.......+..++|.+++.+ |.-..|++..+..++. .-.++..+++..|.++.....++.
T Consensus 137 vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~ 216 (463)
T KOG2816|consen 137 VADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLREL 216 (463)
T ss_pred eeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccccc
Confidence 99999999999999999999999999999998887 6666677666665554 111222233222221100000000
Q ss_pred hhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHH
Q psy6665 169 YKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLA 246 (420)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~ 246 (420)
. ................. +....+..+..+....+..........-..+.++... ++ ..+.+..
T Consensus 217 ~------------~~~~~~~~~~~~~~~~~--~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~ 282 (463)
T KOG2816|consen 217 T------------PGSLDSSHVADAFQSLT--KVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDL 282 (463)
T ss_pred C------------CCcccchhhhhhhhhhc--ccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHH
Confidence 0 00000000011111111 1111222222222222111100000010112222222 66 6666767
Q ss_pred HHHHHHHHHHHHHHHH-HhhhccCchhhHhhhccc------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCC
Q psy6665 247 TVLVGVVRMVFGLLTS-QLLRTYGRRSLTMFSQIE------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFP 313 (420)
Q Consensus 247 ~~~~~~~~~~~~~~~g-~l~d~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 313 (420)
.+..+..+.++.++.. .+...++.|+....++.. ..|..+ .......+.....|...+..+...+
T Consensus 283 ~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~--~~~v~~~~~~~~~pa~~s~~s~~v~ 360 (463)
T KOG2816|consen 283 LSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMF--AAGVVVALAGIVFPAIRAFASILVS 360 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhh--HHHHHHHhhcchhHHHHhHHHhhcc
Confidence 7778888888888777 677778888877766655 122222 2222233344456677788889999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 314 LEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 314 ~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
++.+|++.++...+..+.+.++|.+.+.+...
T Consensus 361 ~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 361 PEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred cccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999887654
No 129
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.41 E-value=2.2e-11 Score=119.43 Aligned_cols=151 Identities=15% Similarity=0.106 Sum_probs=109.2
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILF 291 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~ 291 (420)
..+....|.+..+.++ ..+.+++.+...++.+++.+++|+++||+|||+.++.+.++ .+...+++..+
T Consensus 184 ~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~ 263 (742)
T TIGR01299 184 FVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRL 263 (742)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3455566777677788 67778888889999999999999999999999998887655 22333333333
Q ss_pred HHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC------------cchHHHHHHHHH
Q psy6665 292 YVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG------------GSAMVQWFFALI 359 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g------------~~~~~~~~~~~~ 359 (420)
+.+....+..+...+++.|.+|++.|+...++......+|.++++.+...+....| +|+..+++.++
T Consensus 264 l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~l- 342 (742)
T TIGR01299 264 LSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAF- 342 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHH-
Confidence 44444444567888999999999999999999999999999999988777665443 13444444444
Q ss_pred HHHHHHHhhhccccCC
Q psy6665 360 SVISIVYVYIFLPETH 375 (420)
Q Consensus 360 ~~~~~~~~~~~~~~~~ 375 (420)
..+..++..+++||+.
T Consensus 343 p~ll~ll~~~~lPESP 358 (742)
T TIGR01299 343 PCVFAIGALTFMPESP 358 (742)
T ss_pred HHHHHHHHHHHcCCCH
Confidence 3444444556788873
No 130
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.41 E-value=2e-11 Score=113.31 Aligned_cols=149 Identities=15% Similarity=0.208 Sum_probs=116.1
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
......|.+.++.|. +.+.+.......++..++.++.|.+.||+|||+.+..+..+ ++...++...+.
T Consensus 38 ~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 117 (394)
T PRK10213 38 LPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRAC 117 (394)
T ss_pred HHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHH
Confidence 444467777777788 77888888889999999999999999999999998877776 223333333334
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
.+.......+...+++.|.+|+++|+.+.++......++..++|.+.+.+.+..| ++..+++.++++++..+......|
T Consensus 118 ~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~~~~l~~~~~~p 196 (394)
T PRK10213 118 LGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVMGVLCIFWIIKSLP 196 (394)
T ss_pred HHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3444334566777888999999999999999999999999999999999999988 888888877766665555444456
Q ss_pred cC
Q psy6665 373 ET 374 (420)
Q Consensus 373 ~~ 374 (420)
|+
T Consensus 197 ~~ 198 (394)
T PRK10213 197 SL 198 (394)
T ss_pred CC
Confidence 54
No 131
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.41 E-value=9.5e-12 Score=115.65 Aligned_cols=167 Identities=12% Similarity=0.093 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------
Q psy6665 209 LVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------- 280 (420)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------- 280 (420)
+.+..........+........|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3344444444444556666788888888888 66777888888899999999999999999999998877655
Q ss_pred ----hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHH
Q psy6665 281 ----KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFF 356 (420)
Q Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~ 356 (420)
.+........++.+.......+...+++.|.+|+++|+++.++.+....++..++|.+.+.+.+..| ++..+.+.
T Consensus 85 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 85 CSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 2222222222222222222345667888999999999999999999999999999999988888888 88888888
Q ss_pred HHHHHHHHHHhhhccccCCC
Q psy6665 357 ALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~ 376 (420)
+++.++..++.....||+++
T Consensus 164 ~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 164 AAMGILVLLLSLFILKETRP 183 (392)
T ss_pred HHHHHHHHHHHHHHcCCCCC
Confidence 88877777776666676543
No 132
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.39 E-value=2.3e-11 Score=113.61 Aligned_cols=167 Identities=17% Similarity=0.167 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----
Q psy6665 207 PLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----- 280 (420)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----- 280 (420)
+.+....+..+.............|.+.++.|. ..+.+.......++..++.++.|.++||+|||+.+..+..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 333444444444444556666777877777788 78888899999999999999999999999999998877655
Q ss_pred ------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC-cchHHH
Q psy6665 281 ------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG-GSAMVQ 353 (420)
Q Consensus 281 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g-~~~~~~ 353 (420)
.++..+....++.+.......+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+ +++..+
T Consensus 92 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f 171 (405)
T TIGR00891 92 LACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALF 171 (405)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHH
Confidence 2233333333333333333456667889999999999999999999999999999999998887654 255555
Q ss_pred HHHHHHHHHHHHHhhhccccC
Q psy6665 354 WFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (420)
.+.++..++ .++.....||+
T Consensus 172 ~~~~~~~~~-~~~~~~~~~~~ 191 (405)
T TIGR00891 172 FISILPIIF-ALWLRKNIPEA 191 (405)
T ss_pred HHHHHHHHH-HHHHHHhCCCC
Confidence 544333333 33333445554
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.39 E-value=1.2e-11 Score=115.62 Aligned_cols=159 Identities=15% Similarity=0.107 Sum_probs=118.1
Q ss_pred HHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhH
Q psy6665 216 ALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSL 283 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~ 283 (420)
.+.............|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+ .+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 103 (406)
T PRK11551 24 ALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDF 103 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccH
Confidence 333333345566677888888788 78888999999999999999999999999999998877655 222
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHH
Q psy6665 284 IPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVIS 363 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 363 (420)
..+....++.+.......+...+++.|.+|+++|++++++.+....+|..+++.+.+.+.+..+ ++..+++.+++.++.
T Consensus 104 ~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 182 (406)
T PRK11551 104 PSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA-WRHIFYVGGVGPLLL 182 (406)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC-HHHHHHHHHHHHHHH
Confidence 2233333333332223355667889999999999999999999999999999999888888777 778888777666666
Q ss_pred HHHhhhccccCC
Q psy6665 364 IVYVYIFLPETH 375 (420)
Q Consensus 364 ~~~~~~~~~~~~ 375 (420)
.+....+.||+.
T Consensus 183 ~~~~~~~l~~~~ 194 (406)
T PRK11551 183 VPLLMRWLPESR 194 (406)
T ss_pred HHHHHHhCCCCh
Confidence 655555667653
No 134
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.37 E-value=8.9e-12 Score=119.33 Aligned_cols=160 Identities=16% Similarity=0.160 Sum_probs=124.7
Q ss_pred HHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hh
Q psy6665 215 FALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KS 282 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~ 282 (420)
..+.............|.+.++.|. ..+.++......++..++.++.|+++||+|||+.+..+..+ .+
T Consensus 10 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 89 (485)
T TIGR00711 10 GTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPN 89 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCC
Confidence 3333333455667778888888888 77888999999999999999999999999999998877665 23
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHH
Q psy6665 283 LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVI 362 (420)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 362 (420)
...+....+..+.......+...+++.|.+|+++|+++.++......++..++|.+.+++.++.| ++..+++.+.+.++
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f~~~~~~~~~ 168 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIFLINVPIGII 168 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehhhhhhHHHHH
Confidence 33333344444444444566777999999999999999999999999999999999999999888 88888887777777
Q ss_pred HHHHhhhccccCC
Q psy6665 363 SIVYVYIFLPETH 375 (420)
Q Consensus 363 ~~~~~~~~~~~~~ 375 (420)
..++..+..|+++
T Consensus 169 ~~~~~~~~~~~~~ 181 (485)
T TIGR00711 169 VVVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHHcCCcc
Confidence 7666666666543
No 135
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.37 E-value=4.8e-12 Score=111.78 Aligned_cols=172 Identities=12% Similarity=-0.015 Sum_probs=130.8
Q ss_pred cchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--
Q psy6665 204 GIKPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-- 280 (420)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-- 280 (420)
.|.+.++..++.....+..=-.+..-.|.+.++.++ ..+.+.+.+...+..-++-.+.|.++||.+.|+.+..++++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 344455555444444333345566777888888678 89999999999999999999999999999999888777776
Q ss_pred ---------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHh--HHHHHhcCcc
Q psy6665 281 ---------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYY--PWFKDSVGGS 349 (420)
Q Consensus 281 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~--g~l~~~~g~~ 349 (420)
++...+..+..+.+.+...-.|.+...+..-+|+++||+..++.+...++|+.+.|.+. +++.++.+ +
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~-w 184 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG-W 184 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc-h
Confidence 22222222223333332222456668888999999999999999999999999999999 88888877 9
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 350 AMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
+..|++-++++++..++.++..+++.+
T Consensus 185 ~~~f~~pgiiaiival~~~~~~rd~Pq 211 (448)
T COG2271 185 RAAFYFPGIIAIIVALILLFLLRDRPQ 211 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999888877776544
No 136
>PRK10504 putative transporter; Provisional
Probab=99.36 E-value=4.4e-11 Score=114.07 Aligned_cols=162 Identities=10% Similarity=0.040 Sum_probs=121.4
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------- 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------- 280 (420)
.....+......+.+..+.|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 94 (471)
T PRK10504 15 VAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL 94 (471)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444456677889999988888 66777777888888899999999999999999988766544
Q ss_pred -hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHH
Q psy6665 281 -KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALI 359 (420)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 359 (420)
.+...+.....+.+.......+...+++.|.+|+++|+++.|+.+....++..++|.+.+.+.++.| ++..|.+...+
T Consensus 95 ~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f~~~~~~ 173 (471)
T PRK10504 95 SGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIFLINIPV 173 (471)
T ss_pred hCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHHHHHHHH
Confidence 2222233333333333333456677888999999999999999999999999999999999999888 88888887777
Q ss_pred HHHHHHHhhhccccC
Q psy6665 360 SVISIVYVYIFLPET 374 (420)
Q Consensus 360 ~~~~~~~~~~~~~~~ 374 (420)
+.+..+......|+.
T Consensus 174 ~~l~~~~~~~~~~~~ 188 (471)
T PRK10504 174 GIIGAIATLMLMPNY 188 (471)
T ss_pred HHHHHHHHHHhCCCc
Confidence 776666665555543
No 137
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.35 E-value=5.1e-11 Score=114.01 Aligned_cols=165 Identities=13% Similarity=0.042 Sum_probs=123.5
Q ss_pred HHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------
Q psy6665 210 VITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------- 280 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------- 280 (420)
....+..+........+..-.|.+.++.|. ..+..+....+.++...+.+..|+++||+|||+.+..+..+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~ 88 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA 88 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333444444444456677778999888887 67888888889999999999999999999999998887766
Q ss_pred ---hhHHHHHHHHHHHHHHhhchhhHHHHHhcccC-ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHH
Q psy6665 281 ---KSLIPVFCILFYVAISVIGMLSIPWTMTAEIF-PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFF 356 (420)
Q Consensus 281 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~ 356 (420)
++...++....+.+.......+.....+.+.+ |+++|+++.|+......+|..++|.+.+.+.++.| |++.|++.
T Consensus 89 ~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g-wr~~f~i~ 167 (495)
T PRK14995 89 AFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY-WGSVFLIN 167 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHH
Confidence 33333333333333333334455445555554 78999999999999999999999999999999988 99999888
Q ss_pred HHHHHHHHHHhhhccccCC
Q psy6665 357 ALISVISIVYVYIFLPETH 375 (420)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~ 375 (420)
..++++..++..+++|+.+
T Consensus 168 ~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 168 VPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHHHHHHHhCCCCC
Confidence 8777777777666777654
No 138
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.35 E-value=4.3e-11 Score=110.75 Aligned_cols=152 Identities=7% Similarity=0.054 Sum_probs=117.1
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
........|.+.++.|. ..+.+...+...++..++.++.|++.||+|||+.+..+..+ ++...+....
T Consensus 19 ~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r 98 (382)
T PRK10091 19 EFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGR 98 (382)
T ss_pred HHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 34556677888888788 67788899999999999999999999999999998887766 2333333333
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
++.+.......+.......|.+|+++|+.+.++......++..++|.+.+.+.+..| ++..+.+.+++.++..+..+..
T Consensus 99 ~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 177 (382)
T PRK10091 99 LVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTFLLIAVFNIAVLASIYFW 177 (382)
T ss_pred HHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 333332223345555778899999999999999999999999999999999988888 8888988888777766665566
Q ss_pred cccCC
Q psy6665 371 LPETH 375 (420)
Q Consensus 371 ~~~~~ 375 (420)
.||.+
T Consensus 178 lp~~~ 182 (382)
T PRK10091 178 VPDIR 182 (382)
T ss_pred CCCCC
Confidence 77654
No 139
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.35 E-value=7.4e-12 Score=98.04 Aligned_cols=118 Identities=14% Similarity=0.220 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccchhh
Q psy6665 14 VGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPA 90 (420)
Q Consensus 14 ~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~ 90 (420)
.+.++..++.++ |++.||+|||+.+..+..+..++.+...+. ++.+.+.+ ++.|++.+ ...+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~-~~~~~~ 72 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIAR------------FLQGFGAA-FALVAG 72 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHH------------HHHHHHHH-HHHHhH
Confidence 456778888899 999999999999999999999888887776 77788889 99999999 777778
Q ss_pred hhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc
Q psy6665 91 IVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 91 ~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~ 144 (420)
..++.|.+|+++|++..++.+....+|..+++.+.+.+ +|++.+++.+...++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (141)
T TIGR00880 73 AALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAA 130 (141)
T ss_pred HHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999888876 7999888877665543
No 140
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.35 E-value=2.4e-11 Score=111.71 Aligned_cols=145 Identities=14% Similarity=0.123 Sum_probs=111.4
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h-----hHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K-----SLIP 285 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~-----~~~~ 285 (420)
........|.+..+.+. +.+.+.......++.+++.++.|+++||+|||+.+..+..+ . +...
T Consensus 15 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (365)
T TIGR00900 15 TAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQ 94 (365)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 44455666777777766 77888899999999999999999999999999998876554 2 3333
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHH
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
+.......+.......+...++..|.+|+++|++++++.+....+|..++|.+.+.+.+..| ++..+++.++..++..+
T Consensus 95 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 95 VYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHH
Confidence 33333333333333456667899999999999999999999999999999999999999888 88888777666655554
Q ss_pred Hhh
Q psy6665 366 YVY 368 (420)
Q Consensus 366 ~~~ 368 (420)
..+
T Consensus 174 ~~~ 176 (365)
T TIGR00900 174 LIV 176 (365)
T ss_pred HHH
Confidence 443
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.34 E-value=9.2e-11 Score=109.69 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=112.9
Q ss_pred chhhHHHhHHHHHHhhCC-cch-----HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMN-----VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLI 284 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~-----~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~ 284 (420)
.......+.|.+.++.|. ..+ .+.......+...++.++.|+++||+|||+.+..+... .++.
T Consensus 29 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 108 (408)
T PRK09874 29 AFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIW 108 (408)
T ss_pred HHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 345566788888888777 333 25677778889999999999999999999988876655 2222
Q ss_pred HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 285 PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
.+....++.+. ..+..+....+..|.+|+++|+++.++.+....++..++|.+.+.+.+..+ ++..+++.+++.++..
T Consensus 109 ~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 186 (408)
T PRK09874 109 QFLILRALLGL-LGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LRPVFFITASVLFLCF 186 (408)
T ss_pred HHHHHHHHHHH-hhhhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH
Confidence 22222222222 234455556778889999999999999999999999999999999999888 8888888888777777
Q ss_pred HHhhhccccC
Q psy6665 365 VYVYIFLPET 374 (420)
Q Consensus 365 ~~~~~~~~~~ 374 (420)
+...++.|++
T Consensus 187 ~~~~~~~~~~ 196 (408)
T PRK09874 187 LVTLFCIREN 196 (408)
T ss_pred HHHHHHhccC
Confidence 6666666654
No 142
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.34 E-value=1.8e-11 Score=116.97 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=102.7
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHH---Hh--HHHHHhhccccccchhHHHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSG---YY--TQLIMTGQIEKSLIPVFCILF 76 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~--~~~~~~~r~~~~~~~~~~~~~ 76 (420)
.+........+...++..++.+. |+++||+|||+++..+.++..++.+.+. .. ...+++++ +
T Consensus 283 ~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 350 (490)
T PRK10642 283 YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGL------------L 350 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH------------H
Confidence 33344445566678888999999 9999999999998887765444333211 11 44556677 7
Q ss_pred HHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcccc-------
Q psy6665 77 YVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIP------- 144 (420)
Q Consensus 77 l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~------- 144 (420)
+.|++.+ ........++.|.+|++.|++++++......++..++|.+.+.+ +|+.++++..+++++.
T Consensus 351 ~~g~~~~-~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 351 MLAVILN-CFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHH-HHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 8887766 44445677889999999999999974444445556666666554 4676655444433332
Q ss_pred --ccceeeec-----CcHHHHHHHHHHHhc
Q psy6665 145 --SPVWLLNK-----GRANQALKSLKYLAR 167 (420)
Q Consensus 145 --~~~~l~~~-----~~~~~~~~~~~~~~~ 167 (420)
+|.|+..+ ++.+|+++.+.++++
T Consensus 430 pes~~~~~~~~~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 430 KETANRPLKGATPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ccccCCCCCCccccccchhhHHHHhhcccc
Confidence 77787754 777888887777763
No 143
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.33 E-value=4.7e-11 Score=109.29 Aligned_cols=151 Identities=14% Similarity=0.014 Sum_probs=115.0
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILF 291 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~ 291 (420)
..+....|.+.++.|. +.+.+...+...++..++.+..|+++||+|||+.+..+... .++..+...-+
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQL 87 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3456677888888788 77888888889999999999999999999999876554433 11112222222
Q ss_pred HHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 292 YVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
.. +.+.+.........+|.+|+++|++++++.+....+|..+++.+.+++.++.| |+..|.+.+++.++..++.++.+
T Consensus 88 l~-G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~~~~~~l 165 (368)
T TIGR00903 88 LA-ALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGIILVLAAL 165 (368)
T ss_pred HH-HhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 22 22233333444666899999999999999999999999999999999999888 99999888888888877777778
Q ss_pred ccCCC
Q psy6665 372 PETHG 376 (420)
Q Consensus 372 ~~~~~ 376 (420)
||+++
T Consensus 166 p~~p~ 170 (368)
T TIGR00903 166 PALPF 170 (368)
T ss_pred CCCCC
Confidence 87643
No 144
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.33 E-value=7.3e-11 Score=110.20 Aligned_cols=150 Identities=13% Similarity=0.084 Sum_probs=112.5
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYV 293 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~ 293 (420)
...-+|.+.++.+. ........+.+.++..++.++.|+++||+|||+++..+..+ ++...++...++.
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33344555556677 66777788888899999999999999999999998877665 2333333333333
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcccc
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
+.......+...++..|.+|++.+++.+++.+....++..++|.+.+.+.++.| ++..|++.++..++..+..++..||
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 332222344556788899999999999999999999999999999999888888 8899988888877777665566777
Q ss_pred CCC
Q psy6665 374 THG 376 (420)
Q Consensus 374 ~~~ 376 (420)
+++
T Consensus 194 ~~~ 196 (413)
T PRK15403 194 TVK 196 (413)
T ss_pred Ccc
Confidence 643
No 145
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.33 E-value=5.2e-11 Score=113.19 Aligned_cols=150 Identities=12% Similarity=0.109 Sum_probs=104.9
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCI 289 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~ 289 (420)
..+....+.|.+.++.|+ ..+.+.......++..++.++.|+++||+|||+.+..+.+. .+...+...
T Consensus 51 ~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~ 130 (476)
T PLN00028 51 STFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAV 130 (476)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 344556667777777788 67777777888888999999999999999999988776655 222222222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH----h-----cCcchHHHHHHHHHH
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD----S-----VGGSAMVQWFFALIS 360 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~----~-----~g~~~~~~~~~~~~~ 360 (420)
.++.+....... ....++.|.+|++.|+.++|+.+...++|..+++.+.+.+.. . .| |+..|.+.+++.
T Consensus 131 r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g-Wr~~f~i~g~l~ 208 (476)
T PLN00028 131 RFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA-WRIAFFVPGLLH 208 (476)
T ss_pred HHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh-hHHHHHHHHHHH
Confidence 222222222222 334577899999999999999998888888888777765533 1 35 888888888888
Q ss_pred HHHHHHhhhcccc
Q psy6665 361 VISIVYVYIFLPE 373 (420)
Q Consensus 361 ~~~~~~~~~~~~~ 373 (420)
++..+..+++.++
T Consensus 209 l~~~l~~~~~~~~ 221 (476)
T PLN00028 209 IIMGILVLTLGQD 221 (476)
T ss_pred HHHHHHHHHHcCc
Confidence 7776666544433
No 146
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.33 E-value=1.8e-11 Score=111.89 Aligned_cols=151 Identities=18% Similarity=0.188 Sum_probs=113.9
Q ss_pred hhhHHHhHH-HHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHH
Q psy6665 223 IYITIFYAV-QFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCI 289 (420)
Q Consensus 223 ~~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~ 289 (420)
........| .+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+ .+...+...
T Consensus 12 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (352)
T PF07690_consen 12 FSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIA 91 (352)
T ss_dssp HHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhh
Confidence 344555666 45555587 78888999999999999999999999999999988777666 122223333
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
.++.+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..+ ++..+++.+++.++..++...
T Consensus 92 ~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 92 RFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHHHHHHHHHHHHHC
T ss_pred ccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cccccccccchhhhhhhhHhh
Confidence 3333333334567777999999999999999999999999999999999999988888 888899988888888775444
Q ss_pred ccccC
Q psy6665 370 FLPET 374 (420)
Q Consensus 370 ~~~~~ 374 (420)
+.+++
T Consensus 171 ~~~~~ 175 (352)
T PF07690_consen 171 FLPEP 175 (352)
T ss_dssp CC---
T ss_pred hhhhc
Confidence 44443
No 147
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.32 E-value=2.2e-10 Score=106.91 Aligned_cols=325 Identities=14% Similarity=0.108 Sum_probs=171.3
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHhh-----cchhHHHHhhHHHHHHHHHHHHhHHHHHhhccccccchhHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLTSQLLRTY-----GRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVFCIL 75 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~g~l~dr~-----Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 75 (420)
+|.+.+++....+...+--.+-.+.|.++|-+ .||+-++++.++.+++.+..+.. .. ...+........
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~-----~~-~~~s~~~~~~~l 93 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL-----PA-SESSAAIAVVLL 93 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc-----cc-ccchhhhHHHHH
Confidence 35666777777777777666665559999975 35666666766665555544432 00 001111112233
Q ss_pred HHHHHHhhcccchhhhhhhhhccC--ccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccccc-ce
Q psy6665 76 FYVAISVIAMGPSPAIVYITEVAR--PDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIPSP-VW 148 (420)
Q Consensus 76 ~l~G~~~~~~~~~~~~~~i~e~~~--~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~~~-~~ 148 (420)
++..+|.+ ...+.+-+++.|... +++|+...+.......+|.+++..+++.+ ++|..|.+.+++..+..+ ..
T Consensus 94 ~la~~g~a-~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 94 FLASFGYA-FADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHH-HHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence 77788888 888889999999884 34467777888888888988888887766 677777766555444311 11
Q ss_pred eeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHh--hccccchHHHHHHHHHHHHHhcchhh-
Q psy6665 149 LLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMV--TMATGIKPLLVITVLFALQQLAGIYI- 225 (420)
Q Consensus 149 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~- 225 (420)
...+++.+..........++. . +... ...++...+.++ ..+..+++.....++...... ....
T Consensus 173 ~~~~e~~~~~~~~~~~~~~~~---~--------~~~~--~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~a~ 238 (433)
T PF03092_consen 173 FLLEERKVRPADEVFSFGKEE---V--------PCLF--GSFREQLSELWRALQQRAIWQPILFFIFFFNLPPS-ISSAS 238 (433)
T ss_pred Hhhhhccccccchhhcccccc---c--------chhh--HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccC-CCCcc
Confidence 111111000000000000000 0 0000 001122222222 122223322211111111100 0111
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------------hh
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------------KS 282 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------------~~ 282 (420)
..++.......-++ +...+....+..++.++|..+......+..-|+++..+.++ +.
T Consensus 239 ~fy~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~ 318 (433)
T PF03092_consen 239 SFYFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ 318 (433)
T ss_pred EEEEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe
Confidence 11111111111124 33344455555666677777766666666666666555444 11
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 283 LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
+..+.-..+........+.|.. .+++|++|+...|+.+++...+.++|..++..+...+.+..+
T Consensus 319 ~f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 319 WFALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EEEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 1111112223333344455553 788999999999999999999999999999999988887766
No 148
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.32 E-value=1.2e-10 Score=108.48 Aligned_cols=150 Identities=13% Similarity=0.040 Sum_probs=110.7
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
......|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+... .+...+....++
T Consensus 26 ~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 105 (394)
T PRK11652 26 IYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAI 105 (394)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 334456777777788 77888888999999999999999999999999988777655 222222222222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
.+.......+....+..|.++.+.++.+.++.+....++..++|.+.+.+.+..| ++..+.+.++..++..+...++.|
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 184 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WRACYLFLLLLGAGVTFSMARWMP 184 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222222244555677888898899999999999999999999999999988888 888888877766666555555667
Q ss_pred cCC
Q psy6665 373 ETH 375 (420)
Q Consensus 373 ~~~ 375 (420)
|++
T Consensus 185 ~~~ 187 (394)
T PRK11652 185 ETR 187 (394)
T ss_pred ccC
Confidence 654
No 149
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.32 E-value=1.4e-10 Score=107.93 Aligned_cols=151 Identities=11% Similarity=0.113 Sum_probs=112.6
Q ss_pred chhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHH
Q psy6665 222 GIYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFC 288 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~ 288 (420)
+.+....+.+.++++ .|. ..+.+.......+...+..++.|+++||+|||+.+..+... ++...+..
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 104 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWL 104 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 345566677777654 488 78888888888899999999999999999999998877766 22222333
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.....+.......+...+++.|.+|+++|+++.|+.+....++..++|.+.+.+. ..| ++..+++.+...++..++..
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHHHHHHHHHHHHHH
Confidence 3333332222334566688899999999999999999999999999999999988 567 88888887777666655554
Q ss_pred hccccC
Q psy6665 369 IFLPET 374 (420)
Q Consensus 369 ~~~~~~ 374 (420)
...||.
T Consensus 183 ~~~~~~ 188 (400)
T PRK11646 183 WLLPAY 188 (400)
T ss_pred HhCCcc
Confidence 555553
No 150
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=6.3e-12 Score=116.18 Aligned_cols=152 Identities=11% Similarity=-0.006 Sum_probs=114.0
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
...+....|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+ .+...+....
T Consensus 11 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (379)
T TIGR00881 11 RKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALW 90 (379)
T ss_pred HHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 34455666777667688 77888999999999999999999999999999998887765 2222233333
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHH-HhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQ-YYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~-~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
++.+.......+...+++.|.+|+++|+++.++.+....+|..++|. +.+.+.+..+ ++..+.+.+++.++..++.+.
T Consensus 91 ~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 91 ALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHHHHHHHHHHhe
Confidence 33333333345667789999999999999999999999999999994 6566666666 788888888777776666666
Q ss_pred ccccCC
Q psy6665 370 FLPETH 375 (420)
Q Consensus 370 ~~~~~~ 375 (420)
+.+|++
T Consensus 170 ~~~~~~ 175 (379)
T TIGR00881 170 LLRDSP 175 (379)
T ss_pred eeCCCc
Confidence 666654
No 151
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.31 E-value=1.1e-10 Score=109.91 Aligned_cols=146 Identities=18% Similarity=0.180 Sum_probs=108.1
Q ss_pred HHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------
Q psy6665 211 ITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------- 280 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------- 280 (420)
.+.+..+..........+..|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+...
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~ 101 (426)
T PRK12307 22 SAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSG 101 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33333333333445556666777677788 77888888899999999999999999999999998877765
Q ss_pred --hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHH
Q psy6665 281 --KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFA 357 (420)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~ 357 (420)
.+...+....++.+.......+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..+ ++..+++..
T Consensus 102 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~-w~~~f~i~~ 179 (426)
T PRK12307 102 LASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG-WRAAFFVGL 179 (426)
T ss_pred HHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-HHHHHHHHH
Confidence 2233333333333333334456667889999999999999999999999999999999988888888 777776543
No 152
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.1e-10 Score=108.95 Aligned_cols=152 Identities=14% Similarity=0.053 Sum_probs=113.2
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
...+....|.+.++.|. +.+.+.......++..++.++.|.++||+|||+.+..+... .+...+....
T Consensus 29 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 108 (406)
T PRK15402 29 NDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLR 108 (406)
T ss_pred hhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 44444556777777788 67778888888999999999999999999999998877655 2222222222
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
++.+.......+...+.+.|.+|++.|.+..++......++..++|.+.+.+.+..+ ++..+++.+++.++..+..+..
T Consensus 109 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 109 FLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-WRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred HHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHh
Confidence 222222222345666888899999999999999988888999999999999988888 8888888888877777666556
Q ss_pred cccCC
Q psy6665 371 LPETH 375 (420)
Q Consensus 371 ~~~~~ 375 (420)
.||++
T Consensus 188 ~~~~~ 192 (406)
T PRK15402 188 MPETA 192 (406)
T ss_pred CCCCC
Confidence 67654
No 153
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.31 E-value=3.6e-11 Score=113.37 Aligned_cols=147 Identities=12% Similarity=0.023 Sum_probs=105.6
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------h-------hHH-HHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------K-------SLI-PVFCI 289 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------~-------~~~-~~~~~ 289 (420)
.....|.+. +.|+ +.+.+.......++..++.++.|+++||+|||+.+..+..+ . ... .+...
T Consensus 46 ~~~~~p~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (438)
T TIGR00712 46 FALAMPYLV-EQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVL 124 (438)
T ss_pred HHhhhHHHH-HcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHH
Confidence 444556554 4588 78888899999999999999999999999999887776554 0 011 11111
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh-cCcchHHHHHHHHHHHHHHHHhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS-VGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.+..+.......+.....+.|.+|+++|++++|+.+....+++.++|.+.+...+. .+ |+..|++.++++++..+..+
T Consensus 125 ~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~-w~~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 125 LFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND-WHAALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHH
Confidence 11222222222344557788999999999999999999999999998887765553 45 88888888888877776666
Q ss_pred hccccC
Q psy6665 369 IFLPET 374 (420)
Q Consensus 369 ~~~~~~ 374 (420)
++.||+
T Consensus 204 ~~~~~~ 209 (438)
T TIGR00712 204 AMMRDT 209 (438)
T ss_pred HhccCC
Confidence 666664
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.29 E-value=9.7e-11 Score=110.89 Aligned_cols=148 Identities=11% Similarity=0.038 Sum_probs=102.5
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------h--------hHHHHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------K--------SLIPVFCI 289 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------~--------~~~~~~~~ 289 (420)
+....|.+.++ |+ ..+.+.......++..++.++.|+++||+|||+++..+..+ . +...+...
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 44566766665 88 78888899999999999999999999999999988877655 0 11112222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHH-HHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFF-ALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.++.+.+.....+.....+.|.+|+++|++++|+.+....+++.+ +|.+...+....| |+..+++.++++++..++..
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g-w~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND-WHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHH
Confidence 222222222233444567788999999999999999998888754 4444333333335 88888888877777666666
Q ss_pred hccccCC
Q psy6665 369 IFLPETH 375 (420)
Q Consensus 369 ~~~~~~~ 375 (420)
++.||+.
T Consensus 206 ~~~~~~~ 212 (452)
T PRK11273 206 AMMRDTP 212 (452)
T ss_pred HHccCCH
Confidence 6666653
No 155
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.29 E-value=8.8e-11 Score=108.61 Aligned_cols=150 Identities=14% Similarity=0.216 Sum_probs=116.4
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFY 292 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~ 292 (420)
......|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+ .+........+.
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 88 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFL 88 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 345667788887788 78888888999999999999999999999999998877665 222223333333
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccc
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLP 372 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (420)
.+.......+...++..|.+|+++|+++.++.+....++..++|.+.+.+.+..| ++..+.+.+.++++..+...+..|
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAALVFFFIP 167 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3333333345666889999999999999999999999999999999999999888 888888888877777666666666
Q ss_pred cCC
Q psy6665 373 ETH 375 (420)
Q Consensus 373 ~~~ 375 (420)
|+.
T Consensus 168 ~~~ 170 (377)
T PRK11102 168 ETL 170 (377)
T ss_pred ccC
Confidence 653
No 156
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.29 E-value=1.4e-10 Score=108.48 Aligned_cols=149 Identities=13% Similarity=0.077 Sum_probs=109.1
Q ss_pred HHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-CchhhHhhhccc--------h--h-
Q psy6665 217 LQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-GRRSLTMFSQIE--------K--S- 282 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~--------~--~- 282 (420)
......++.+..++|.|+.+. |+ ..++............++.+++|+++||+ |||+.+..+..+ . .
T Consensus 19 ~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~ 98 (493)
T PRK15462 19 IWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI 98 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 333445778888999998775 88 77777888888888899999999999999 999998877665 0 0
Q ss_pred HHHHHHHHHHHHHHhhc-hhhHHHHHhcccCChh--hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHH
Q psy6665 283 LIPVFCILFYVAISVIG-MLSIPWTMTAEIFPLE--IRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALI 359 (420)
Q Consensus 283 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 359 (420)
..............+.+ ..+...++..|.+|++ .|.+++++.+...++|+.++|.+.+++.+..| ++..|.+.++.
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w~~~F~iaaig 177 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-WAMGFGLAAVG 177 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-hHHHHHHHHHH
Confidence 00111111111112222 2355568899999975 69999999999999999999999999999888 88888876655
Q ss_pred HHHHHHH
Q psy6665 360 SVISIVY 366 (420)
Q Consensus 360 ~~~~~~~ 366 (420)
.+++.+.
T Consensus 178 m~l~li~ 184 (493)
T PRK15462 178 MIAGLVI 184 (493)
T ss_pred HHHHHHH
Confidence 4444443
No 157
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.26 E-value=3.6e-10 Score=104.04 Aligned_cols=155 Identities=17% Similarity=0.165 Sum_probs=107.1
Q ss_pred HHhcchhhHHHhHHH-HHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h-hH
Q psy6665 218 QQLAGIYITIFYAVQ-FLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K-SL 283 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~-~~ 283 (420)
......+....+.|. +.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+ . +.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~ 91 (366)
T TIGR00886 12 LSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSY 91 (366)
T ss_pred HHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 333345667777886 4455588 77888899999999999999999999999999988877665 2 33
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh----------cCcchHHH
Q psy6665 284 IPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS----------VGGSAMVQ 353 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~----------~g~~~~~~ 353 (420)
..+....++.+.. .+..+....++.|.+|+++|+.+.++......+|..+++.+.+.+.+. .+ ++..+
T Consensus 92 ~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~-w~~~~ 169 (366)
T TIGR00886 92 SVLLLLRLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLA-WGWAF 169 (366)
T ss_pred HHHHHHHHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccccc-ccchh
Confidence 3333333333332 333444568889999999999999999988888888888887766653 24 66666
Q ss_pred -HHHHHHHHHHHHHhhhccccC
Q psy6665 354 -WFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 354 -~~~~~~~~~~~~~~~~~~~~~ 374 (420)
...+++..+..++.+...+|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~ 191 (366)
T TIGR00886 170 VIVPAGILLLPALLIFFVGADT 191 (366)
T ss_pred HHHHHHHHHHHHHHHHHhcccC
Confidence 333444444444444444543
No 158
>KOG1330|consensus
Probab=99.26 E-value=4.5e-12 Score=113.11 Aligned_cols=169 Identities=16% Similarity=0.075 Sum_probs=131.9
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------- 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------- 280 (420)
.++....+..--+.+..-.+..-+..|. +...+.+.....++..+++++.|++.||+.|++++.++..+
T Consensus 38 l~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f 117 (493)
T KOG1330|consen 38 LCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF 117 (493)
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH
Confidence 3333334443444444444444444477 77888999999999999999999999999999998888777
Q ss_pred -hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHH
Q psy6665 281 -KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALI 359 (420)
Q Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 359 (420)
.+++.+++.-.+.+..-.++.|+..++++|.+|.++|++++++.++...+|+.+|-.+.+.+.+..+.|++.+...+++
T Consensus 118 s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl 197 (493)
T KOG1330|consen 118 SNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVL 197 (493)
T ss_pred HHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHH
Confidence 3444444444455555556788888999999999999999999999999999999888888888888788999999999
Q ss_pred HHHHHHHhhhccccCCCCChH
Q psy6665 360 SVISIVYVYIFLPETHGRTLL 380 (420)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~ 380 (420)
.++..++..++.+|..++..+
T Consensus 198 ~vi~~~L~~~f~~eP~rga~~ 218 (493)
T KOG1330|consen 198 GVIVGLLVFLFVREPERGARD 218 (493)
T ss_pred HHHHHHHHHhhccCccccccc
Confidence 999999998888887765433
No 159
>PRK03699 putative transporter; Provisional
Probab=99.26 E-value=3.8e-10 Score=104.92 Aligned_cols=160 Identities=13% Similarity=0.016 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----
Q psy6665 207 PLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----- 280 (420)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----- 280 (420)
+..+.+.+..+.............|.+.++.|. ..+.+.......++..++.++.|++.||+|||+.+..+..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 334444343443333345666778888887788 77888888888999999999999999999999988877654
Q ss_pred ------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh-cCcchHHH
Q psy6665 281 ------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS-VGGSAMVQ 353 (420)
Q Consensus 281 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~g~~~~~~ 353 (420)
++...+.....+.+.......+....++.|.+|++.|+.+.+..+....+++.++|.+.+.+.+. .| ++..+
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w~~~f 165 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-WYWVY 165 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-HHHHH
Confidence 22222222222222222223445567889999999999999999888889999999998887654 56 88888
Q ss_pred HHHHHHHHHHHHHh
Q psy6665 354 WFFALISVISIVYV 367 (420)
Q Consensus 354 ~~~~~~~~~~~~~~ 367 (420)
.+.+++.++..++.
T Consensus 166 ~~~~~~~~~~~~~~ 179 (394)
T PRK03699 166 ACIGLVYVAIFILT 179 (394)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777666655443
No 160
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=2.5e-10 Score=109.66 Aligned_cols=145 Identities=17% Similarity=0.144 Sum_probs=108.0
Q ss_pred HHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------
Q psy6665 211 ITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------- 280 (420)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------- 280 (420)
...+..+.............|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 33333333333445556667777777788 77778888888999999999999999999999988777654
Q ss_pred --hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHH
Q psy6665 281 --KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFF 356 (420)
Q Consensus 281 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~ 356 (420)
.+...+....++.+....+..+....++.|.+|++.|+.+.++......+|..++|.+.+.+.+..+ ++..+.+.
T Consensus 104 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-w~~~f~~~ 180 (496)
T PRK03893 104 FAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG-WRALFFIG 180 (496)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-HHHHHHHH
Confidence 2333333333333333334456667889999999999999999999999999999999999999888 77776653
No 161
>PRK11043 putative transporter; Provisional
Probab=99.25 E-value=6.6e-10 Score=103.66 Aligned_cols=143 Identities=15% Similarity=0.106 Sum_probs=105.1
Q ss_pred HHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHH
Q psy6665 227 IFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVA 294 (420)
Q Consensus 227 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 294 (420)
....|.+.++.|. +.+.+.......++..++.++.|+++||+|||+.+..+..+ .+...+....++.+
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 105 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQA 105 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3334455566688 78888899999999999999999999999999998877655 22222222222222
Q ss_pred HHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 295 ISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
.......+...++..|.+|++.++...+..+....++..++|.+.+.+.+..| ++..+++.+++.++..+..+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHc
Confidence 22222234445778899999989999999998899999999999999999888 8888888877777766655433
No 162
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.23 E-value=4.3e-10 Score=104.83 Aligned_cols=149 Identities=11% Similarity=0.020 Sum_probs=101.4
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---h------------hHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---K------------SLIPV 286 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---~------------~~~~~ 286 (420)
......+.+.+.++.|. ..+.+.......++..++.++.|++.||+|||+.+..+..+ . ++..+
T Consensus 29 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (402)
T TIGR00897 29 DGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLI 108 (402)
T ss_pred hhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHH
Confidence 44456677888888788 78899999999999999999999999999999988776655 0 11111
Q ss_pred HHHHHHHHHHhhc-hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHH-HHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 287 FCILFYVAISVIG-MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILM-FFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 287 ~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~-~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
...... .+.+.+ ..+...+...+.+|+++|++++|+.+....+|. .++|.+.+.+.+..| +...++.......+..
T Consensus 109 ~~~~~i-~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 186 (402)
T TIGR00897 109 LLFYGI-RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-EMNTLWSALAFVLTGG 186 (402)
T ss_pred HHHHHH-HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-hHHHHHHHHHHHHHHH
Confidence 111111 111111 223334667788899999999999999999986 578998888888877 5444444433333333
Q ss_pred HHhhhcccc
Q psy6665 365 VYVYIFLPE 373 (420)
Q Consensus 365 ~~~~~~~~~ 373 (420)
++..++.++
T Consensus 187 ~~~~~~~~~ 195 (402)
T TIGR00897 187 VIALFSNKD 195 (402)
T ss_pred HHHHhccCC
Confidence 333334443
No 163
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.23 E-value=3.2e-10 Score=107.55 Aligned_cols=154 Identities=12% Similarity=0.045 Sum_probs=113.4
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHh---hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhhHhhhccc------
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLED---MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRT-YGRRSLTMFSQIE------ 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~---~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~------ 280 (420)
.....+....+++....++|.|+++ .|+ ..+++.......+...++.+++|+++|| +|||+++..+..+
T Consensus 15 l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~ 94 (475)
T TIGR00924 15 LFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHF 94 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 3334444444577888899999876 477 7788899999999999999999999999 8999998888766
Q ss_pred -----hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhh---hhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHH
Q psy6665 281 -----KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEI---RGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMV 352 (420)
Q Consensus 281 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~ 352 (420)
.+...+.....+.+.......+...++.+|.+|++. |+++.++.+...++|..++|.+.+++.++.| ++..
T Consensus 95 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g-~~~~ 173 (475)
T TIGR00924 95 MLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG-YHVG 173 (475)
T ss_pred HHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC-hHHH
Confidence 111122222222222222234566688889988653 8889999999999999999999999999888 8888
Q ss_pred HHHHHHHHHHHHHH
Q psy6665 353 QWFFALISVISIVY 366 (420)
Q Consensus 353 ~~~~~~~~~~~~~~ 366 (420)
|.+.++..+++.+.
T Consensus 174 f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 174 FNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777555554433
No 164
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.22 E-value=1.6e-09 Score=100.41 Aligned_cols=168 Identities=16% Similarity=0.159 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHH-hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLE-DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--- 280 (420)
++.++...+.+...+..-+......+.+.+ +.|+ ..+.+.......+...+.++..|++.||+|.|+++..+..+
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 344555555454444434444444555544 4578 78888888889999999999999999999999888777666
Q ss_pred ----h---------hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHH----
Q psy6665 281 ----K---------SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFK---- 343 (420)
Q Consensus 281 ----~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~---- 343 (420)
. ++..++...++.+. ..+..+.....+++.+|+++||++.|+....+++|..+++++.+.+.
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gi-gg~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l 191 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGF-AGANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPV 191 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHH-HHHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 1 22223333333333 33345566788899999999999999998777777776666665533
Q ss_pred -HhcCc------------chHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 344 -DSVGG------------SAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 344 -~~~g~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
+..|. ++...+++..+.++..++.+++.++.
T Consensus 192 ~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 192 FAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32220 34455566666666666666555543
No 165
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.21 E-value=1.2e-10 Score=107.55 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=109.1
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
.+....+.|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+ .+...+....
T Consensus 19 ~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTY 98 (377)
T ss_pred HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566678888888788 78889999999999999999999999999999998877665 2222222222
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
...+.......+.......|.+| ++|+++.++......+|..+++.+.+.+.+..| ++..+.+.+++.++..+..+++
T Consensus 99 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 99 GLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222223344456677777 569999999999999998887777777777777 8888888888887777666555
Q ss_pred ccc
Q psy6665 371 LPE 373 (420)
Q Consensus 371 ~~~ 373 (420)
.++
T Consensus 177 ~~~ 179 (377)
T TIGR00890 177 IGY 179 (377)
T ss_pred eec
Confidence 544
No 166
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.20 E-value=5e-10 Score=105.92 Aligned_cols=147 Identities=12% Similarity=0.142 Sum_probs=107.1
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILF 291 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~ 291 (420)
..+..+.|.+.++.|. ..+.+.......+...++.++.|+++||+|||+.++.+..+ .+...+.....
T Consensus 36 ~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 115 (455)
T TIGR00892 36 KAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAG 115 (455)
T ss_pred cchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 4456677888888788 67788888888888889999999999999999988877655 11112211111
Q ss_pred HHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 292 YVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 292 ~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
...+.+.+. .+...+++.+.+| ++|+++.|+.+....++..++|.+.+.+.+..| ++..|++.+++.++..+..++.
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-wr~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 116 FITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-WRGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHh
Confidence 111222222 2444566778886 789999999999999999999999999999988 9999999888777665554444
Q ss_pred cc
Q psy6665 371 LP 372 (420)
Q Consensus 371 ~~ 372 (420)
.+
T Consensus 194 ~~ 195 (455)
T TIGR00892 194 RP 195 (455)
T ss_pred CC
Confidence 33
No 167
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=1.9e-10 Score=109.77 Aligned_cols=133 Identities=15% Similarity=0.109 Sum_probs=96.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------hh--HHHHHHHHHHHHHHhhchhhHHH
Q psy6665 240 RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------KS--LIPVFCILFYVAISVIGMLSIPW 305 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------~~--~~~~~~~~~~~~~~~~~~~~~~~ 305 (420)
..+.+.......++..++.++.|+++||+|||+.+..+..+ .. ...++...++.+.......+...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 46778888999999999999999999999999988777665 01 11222222333333333456667
Q ss_pred HHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHh---HHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 306 TMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYY---PWFKDSVGGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 306 ~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~---g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
+++.|.+|+++|+.+.++.+....+|..+++.+. +...+..+ ++..+.+.+...++..+ ..+++||+
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-w~~~f~~~~~~~~~~~~-~~~~l~~~ 219 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG-WRIPLGLQLIPAGLLFL-GLFFLPES 219 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc-HHHHHHHHHHHHHHHHH-HHhcCCCC
Confidence 8999999999999999999999999999999988 55555666 78888775555444443 34556665
No 168
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.19 E-value=1.5e-09 Score=103.74 Aligned_cols=136 Identities=15% Similarity=0.077 Sum_probs=98.3
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------hh-------------H---HHHHHHHHHH
Q psy6665 238 GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------KS-------------L---IPVFCILFYV 293 (420)
Q Consensus 238 g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------~~-------------~---~~~~~~~~~~ 293 (420)
+. +.+.+...+...++.+++.++.|+++||+|||+++..+..+ .. + ..++..-++.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 45 56777888999999999999999999999999998877665 00 0 1112222333
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHH--------HhcCcchHHHHHHHHHHHHHHH
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFK--------DSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~--------~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
+....+..+...+++.|.+|+++|+.++++.+....+|..+++.+.+.+. +..| |+..+++.++..++..+
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~ 209 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLM 209 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHH
Confidence 33334446677799999999999999999999999999888877655443 2345 77888777666666544
Q ss_pred HhhhccccCC
Q psy6665 366 YVYIFLPETH 375 (420)
Q Consensus 366 ~~~~~~~~~~ 375 (420)
. .+++||+.
T Consensus 210 ~-~~~l~~s~ 218 (479)
T PRK10077 210 L-LYFVPETP 218 (479)
T ss_pred H-HHcCCCCc
Confidence 3 45677764
No 169
>KOG2615|consensus
Probab=99.19 E-value=1.3e-10 Score=101.16 Aligned_cols=137 Identities=13% Similarity=0.175 Sum_probs=97.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcc
Q psy6665 241 MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGMLSIPWTMTAE 310 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (420)
.-++...+.+++.+++.++..|.++||+|||.++..|.+. +.....+...-+.++..-+...+..++++|
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~rAiisd 147 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVIRAIISD 147 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHh
Confidence 3567788889999999999999999999999999988877 111122222122333333445566799999
Q ss_pred cCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH---hcCcchHHH--HHHHHHHHHHHHHhhhccccCCCC
Q psy6665 311 IFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD---SVGGSAMVQ--WFFALISVISIVYVYIFLPETHGR 377 (420)
Q Consensus 311 ~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~---~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 377 (420)
++++++|+.+++..+....+|.++||.+.|++.. ..|++...+ ++..++..........++|||-..
T Consensus 148 V~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~ 219 (451)
T KOG2615|consen 148 VVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPL 219 (451)
T ss_pred hcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 9999999999999999999999999999999887 566333333 222222222233344578887543
No 170
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.19 E-value=7.2e-10 Score=102.42 Aligned_cols=152 Identities=13% Similarity=0.078 Sum_probs=107.5
Q ss_pred hhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhh-hccc-----------hhHHHHHH
Q psy6665 223 IYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMF-SQIE-----------KSLIPVFC 288 (420)
Q Consensus 223 ~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~-~~~~-----------~~~~~~~~ 288 (420)
........|.++++ .|. ..+.+.......+...+..++.|.++||+|||+.++. +... +++..+..
T Consensus 13 ~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 92 (375)
T TIGR00899 13 GALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLV 92 (375)
T ss_pred HHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 45556667777654 477 7788888888889999999999999999998876543 2222 22222222
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCChhhhhhh--HHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIA--QGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~--~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
.............|...++..|..|++.|+.+ .+.......+|..++|.+.+.+.+..| ++..+++.+.+.++..++
T Consensus 93 ~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~~~~~~~~~~~~ 171 (375)
T TIGR00899 93 LGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLTAALAFVLCGVL 171 (375)
T ss_pred HHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 22222233333456666777788777666644 577778888999999999999999888 888998888887777777
Q ss_pred hhhccccCC
Q psy6665 367 VYIFLPETH 375 (420)
Q Consensus 367 ~~~~~~~~~ 375 (420)
.++++||.+
T Consensus 172 ~~~~~~~~~ 180 (375)
T TIGR00899 172 VWLFLPSYP 180 (375)
T ss_pred HHHhCCCcc
Confidence 666677643
No 171
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.19 E-value=1.5e-10 Score=110.14 Aligned_cols=151 Identities=11% Similarity=-0.053 Sum_probs=108.1
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hhHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KSLIP 285 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~~~~ 285 (420)
-..+....|.+.++.|. ..+.+...+.+.++..++.++.|+++||+|+|+.+..+.++ .+...
T Consensus 45 r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 45 RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 33445557888888788 78888899999999999999999999999999987555433 12222
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc--CcchHHHHHHHHHHHHH
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV--GGSAMVQWFFALISVIS 363 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~ 363 (420)
++...+..+.......+....++.|.+|+++|++++|+......+|..+++.+..++.+.. ++++..+.+.+++.++.
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~ 204 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALII 204 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHH
Confidence 2222223333323335666789999999999999999999999999999998887776653 22556666666666666
Q ss_pred HHHhhhcccc
Q psy6665 364 IVYVYIFLPE 373 (420)
Q Consensus 364 ~~~~~~~~~~ 373 (420)
.++.+++.++
T Consensus 205 ~i~~~~~~~~ 214 (467)
T PRK09556 205 GFIGLRYGSD 214 (467)
T ss_pred HHHHHHhCCC
Confidence 5555555444
No 172
>PRK12382 putative transporter; Provisional
Probab=99.18 E-value=1.3e-09 Score=101.41 Aligned_cols=136 Identities=10% Similarity=0.021 Sum_probs=97.4
Q ss_pred chhhHHHhHHHHHH-hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---h---------------
Q psy6665 222 GIYITIFYAVQFLE-DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---K--------------- 281 (420)
Q Consensus 222 ~~~~~~~~~~~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---~--------------- 281 (420)
.........|.++. +.|. ..+.+...+...+...+++++.|+++||+|||+.+..+.+. .
T Consensus 30 ~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (392)
T PRK12382 30 TVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAP 109 (392)
T ss_pred HHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchh
Confidence 34455556676654 4588 88899999999999999999999999999999998876443 0
Q ss_pred -hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHH
Q psy6665 282 -SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFAL 358 (420)
Q Consensus 282 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~ 358 (420)
+...++....+.+.......+...++..|.+|+++|++++++.......+..++|.+.+.+.+..| +...+.+...
T Consensus 110 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~ 186 (392)
T PRK12382 110 FKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG-FAALALTTMV 186 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC-hHHHHHHHHH
Confidence 011111122222222222234455777899999999999999999999999999999999988888 6654444333
No 173
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.18 E-value=1.2e-09 Score=102.38 Aligned_cols=150 Identities=14% Similarity=0.081 Sum_probs=107.0
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hhHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KSLIP 285 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~~~~ 285 (420)
........|.+.++.+. +.+.+.......+..+++.++.|+++||+|||+.+..+..+ .+...
T Consensus 33 ~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (417)
T PRK10489 33 LGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLA 112 (417)
T ss_pred HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 44556677888777766 77788999999999999999999999999999887665432 01111
Q ss_pred HHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHH
Q psy6665 286 VFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIV 365 (420)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 365 (420)
+....+..+.......+...++..|.+|+++|+++.++.+....++..++|.+.+.+.+..| +.+.+.+.++..++..+
T Consensus 113 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~~~~~~~~~~~ 191 (417)
T PRK10489 113 IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGLAAAGTFITLL 191 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHH
Confidence 22222222222222234456788899999999999999999999999999999999998888 77777766665555544
Q ss_pred HhhhccccC
Q psy6665 366 YVYIFLPET 374 (420)
Q Consensus 366 ~~~~~~~~~ 374 (420)
.. ...|+.
T Consensus 192 ~~-~~l~~~ 199 (417)
T PRK10489 192 PL-LRLPAL 199 (417)
T ss_pred HH-HhCCCC
Confidence 43 445543
No 174
>KOG3098|consensus
Probab=99.18 E-value=3e-08 Score=90.88 Aligned_cols=107 Identities=8% Similarity=-0.053 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHHHHhhccc
Q psy6665 9 LATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVAISVIAMG 86 (420)
Q Consensus 9 ~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~ 86 (420)
....++-...+.+.+++ +.+.|+.|.|+.++++......-.....+. -+.++..- .+.|+|.+ ..
T Consensus 53 y~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~y~~yfss------------allG~Gaa-ll 119 (461)
T KOG3098|consen 53 YYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNSYYLYFSS------------ALLGFGAA-LL 119 (461)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcchHHHHHHH------------HHhhhhHH-he
Confidence 34456667778888999 999999999999999999999888887777 77778888 99999999 87
Q ss_pred chhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 87 PSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 87 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
...--.|++|..+++++.+..++..+....+.++|..+-..+
T Consensus 120 w~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 120 WTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred ecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 777889999999999999999999888888888887654443
No 175
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.17 E-value=7.6e-10 Score=105.09 Aligned_cols=141 Identities=13% Similarity=0.077 Sum_probs=103.6
Q ss_pred HHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhhHhhhccc-----------hh
Q psy6665 217 LQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT-YGRRSLTMFSQIE-----------KS 282 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~-----------~~ 282 (420)
+....+++.+..+++.|+++. |+ ..++......+.....+..+++|+++|| +|||+++..+..+ ..
T Consensus 24 ~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~ 103 (489)
T PRK10207 24 LWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLL 103 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344456788888888888764 77 5666666666777777778899999999 9999999888777 11
Q ss_pred -HHHHHHHHHHHHHHhhchhhHHHHHhcccCChh--hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHH
Q psy6665 283 -LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLE--IRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFAL 358 (420)
Q Consensus 283 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~ 358 (420)
...+.......+.......|...+++.|.+|++ .|+.++++.+...++|..++|.+.|++.++.| |+..|++.++
T Consensus 104 ~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g-w~~~F~i~~i 181 (489)
T PRK10207 104 KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG-YSVTYNLCGA 181 (489)
T ss_pred chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC-hHHHHHHHHH
Confidence 111112222222222334566678999999877 45788999999999999999999999999998 8888877544
No 176
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.17 E-value=1.6e-10 Score=109.97 Aligned_cols=136 Identities=11% Similarity=0.068 Sum_probs=104.8
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------h------hHHHHHHHHHHHHHHhhchhhH
Q psy6665 238 GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------K------SLIPVFCILFYVAISVIGMLSI 303 (420)
Q Consensus 238 g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------~------~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
++ ..+.+.....+.++..++.++.|+++||+|+|+.+..+.++ . ....++...++.+.......+.
T Consensus 72 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~ 151 (465)
T TIGR00894 72 KWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPA 151 (465)
T ss_pred CCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhh
Confidence 55 56677888889999999999999999999999988877665 1 0112222223333333344667
Q ss_pred HHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc-CcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 304 PWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV-GGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 304 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
...++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+.. | ++..|.+.+++.++..++.+.+.++.
T Consensus 152 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~ 222 (465)
T TIGR00894 152 THKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADD 222 (465)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCC
Confidence 7789999999999999999999999999999999999998884 7 88899888888777766665555443
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.17 E-value=2.7e-09 Score=102.48 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=93.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hh------HHHHHHHHHHHHHHhhchhhH
Q psy6665 241 MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KS------LIPVFCILFYVAISVIGMLSI 303 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~------~~~~~~~~~~~~~~~~~~~~~ 303 (420)
.+.+.......++.+++.++.|+++||+|||+.+..+.++ .. ...+....++.+....+..+.
T Consensus 56 ~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 135 (502)
T TIGR00887 56 SVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPL 135 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 3456778888899999999999999999999988766554 11 122223333333333334577
Q ss_pred HHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh-----------------------cCcchHHHHHHHHHH
Q psy6665 304 PWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS-----------------------VGGSAMVQWFFALIS 360 (420)
Q Consensus 304 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~-----------------------~g~~~~~~~~~~~~~ 360 (420)
...+..|.+|++.|+++.++.+....+|..+++.+...+... .+ |+..+.+.++.+
T Consensus 136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~ 214 (502)
T TIGR00887 136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPA 214 (502)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHH
Confidence 789999999999999999999999999999988887655431 23 666665444444
Q ss_pred HHHHHHhhhccccCC
Q psy6665 361 VISIVYVYIFLPETH 375 (420)
Q Consensus 361 ~~~~~~~~~~~~~~~ 375 (420)
++ .++..+++||+.
T Consensus 215 ~i-~~~~~~~lpESp 228 (502)
T TIGR00887 215 LL-ALYFRLTIPETP 228 (502)
T ss_pred HH-HHHHHHhCCCCH
Confidence 43 333446788874
No 178
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.16 E-value=1.4e-09 Score=101.42 Aligned_cols=140 Identities=10% Similarity=-0.007 Sum_probs=101.8
Q ss_pred chhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hh---
Q psy6665 222 GIYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KS--- 282 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~--- 282 (420)
+........|.++++ .|. ..+.+.......+...+++++.|+++||+|||+++..+.+. .+
T Consensus 30 ~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (399)
T PRK05122 30 TIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPV 109 (399)
T ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccch
Confidence 355566677776654 487 78888999999999999999999999999999998887654 00
Q ss_pred --HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHH
Q psy6665 283 --LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALIS 360 (420)
Q Consensus 283 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 360 (420)
...++...++.+.......+....+..|.+|+++|+++.++......++..++|.+.+.+.+..| ++..+.+..++.
T Consensus 110 ~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~~~~~~~~~ 188 (399)
T PRK05122 110 LSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGG-LAGLGLLIMLLA 188 (399)
T ss_pred hHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHccc-HHHHHHHHHHHH
Confidence 00111112222222222345555777899999999999999999889999999999999999888 766665555444
Q ss_pred HH
Q psy6665 361 VI 362 (420)
Q Consensus 361 ~~ 362 (420)
++
T Consensus 189 ~~ 190 (399)
T PRK05122 189 LL 190 (399)
T ss_pred HH
Confidence 43
No 179
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.16 E-value=9.8e-10 Score=100.34 Aligned_cols=145 Identities=17% Similarity=0.159 Sum_probs=112.3
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCI 289 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~ 289 (420)
.........|.+.++.|. +.+.+.......+...++.++.|+++||+|||+.+..+... .+.......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVG 93 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 455667778888888777 77888889999999999999999999999999988777666 122222222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
....+.......+...++..|.+|+++|++..++.+....+|..++|.+.+.+.+..+ ++..+.+.+...++..+..
T Consensus 94 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 94 RFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLILAILGLLLALLL 170 (352)
T ss_pred HHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Confidence 2232222233356667999999999999999999999999999999999999999888 7777777776666655544
No 180
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.14 E-value=9.2e-10 Score=86.02 Aligned_cols=124 Identities=17% Similarity=0.267 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhh
Q psy6665 249 LVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIR 317 (420)
Q Consensus 249 ~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r 317 (420)
...++.+++.++.+++.||++||+.+..+... .+...........+.......+....+..|.+|+++|
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 85 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEER 85 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhh
Confidence 34677888999999999999999988776654 1122222222222222233456667889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcccc
Q psy6665 318 GIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
+++.++.+....++..++|.+.+.+.+..+ +...+.+.+....+..+..+...||
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 999999999999999999999999998877 7788888887777777766655554
No 181
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.13 E-value=3.7e-09 Score=98.12 Aligned_cols=146 Identities=14% Similarity=0.166 Sum_probs=104.1
Q ss_pred HHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccchhH--------HHHHHHHHHHHHH
Q psy6665 226 TIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIEKSL--------IPVFCILFYVAIS 296 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 296 (420)
.....+.+..+.+. +.+.+.....+.+...+..++.|+++||+|||+++..+..+... .......+..+..
T Consensus 22 ~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 101 (393)
T PRK11195 22 LLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHPLLAYGLVGIG 101 (393)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666 66678888888999999999999999999999998888766100 0112222333344
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
.....|...+++.|.+|+++|++++|+.+....++..++|.+.|.+.+. . +...+.+.+...+++. +..+.+||.
T Consensus 102 ~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~-~~~~~~i~~~~~~~~~-~~~~~l~~~ 176 (393)
T PRK11195 102 AAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-H-AEAALAVCALIYLLAA-LFNLFIPRL 176 (393)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 4445678789999999999999999999999999999999999999885 3 4555555444433333 333456654
No 182
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.11 E-value=3.1e-09 Score=98.70 Aligned_cols=140 Identities=14% Similarity=0.007 Sum_probs=106.0
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
........|.+.++.|. ..+.+...+...++..++.++.|++.||+|||+++..+..+ +++..++...
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r 104 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA 104 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 34566778888888888 78888999999999999999999999999999999988877 3344444444
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHH
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVIS 363 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 363 (420)
+..+.......+....++.+.+| ++|+.++|+.......|..+++.+.+++.++..+|+..+.++++..++.
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 44333333334455577788887 7799999999999999999999999998887633766666555554443
No 183
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.11 E-value=4e-09 Score=97.63 Aligned_cols=133 Identities=9% Similarity=-0.057 Sum_probs=99.1
Q ss_pred HHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h
Q psy6665 214 LFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K 281 (420)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~ 281 (420)
+..+...........+.|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+ +
T Consensus 13 ~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PRK03633 13 CGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV 92 (381)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333444466677889999988888 78899999999999999999999999999999988777665 2
Q ss_pred hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc
Q psy6665 282 SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV 346 (420)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 346 (420)
+...+....+..+.......+.......+..|+++|+++++..+....+|..++|.+.+.+.+..
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 93 GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 22223333333232222234444456667888899999999999999999999999999877654
No 184
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.10 E-value=9e-10 Score=102.96 Aligned_cols=126 Identities=16% Similarity=0.220 Sum_probs=103.9
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh------HHHHHhhccccccchhHHHHHHH
Q psy6665 6 NVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY------TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+......++..++.+++.++ |+++||+|||+++..+.++.+++..+.... .+.+++.+ ++.
T Consensus 251 ~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~------------~l~ 318 (418)
T TIGR00889 251 KNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSM------------IVY 318 (418)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHH------------HHH
Confidence 45567777888888888999 999999999999999999988887666552 23456677 999
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHH-HHHHHHHHHHHHHhhhh----------hhHHHHHhHhhhcccc
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGP-SITSLGMVIVYALGAVL----------HWRTVAWLSLAYILIP 144 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~----------~wr~~f~~~~~~~~~~ 144 (420)
|++.+ ...+....++.|++|+++|+++.++.+ ...++|..++|.+++.+ ||+..|++.+++.++.
T Consensus 319 g~~~~-~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~ 394 (418)
T TIGR00889 319 GCAFD-FFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAIL 394 (418)
T ss_pred HHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHH
Confidence 99998 777767889999999999999999997 67888999999888765 3899988887776655
No 185
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.08 E-value=4.4e-10 Score=105.45 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=103.1
Q ss_pred chHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHh
Q psy6665 6 NVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISV 82 (420)
Q Consensus 6 ~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~ 82 (420)
.......++..++..++.++ |+++||+|||+.+..+.++.+++.++.++. .+.+...+ ++.|++.
T Consensus 262 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~------------~l~g~~~ 329 (420)
T PRK09528 262 RVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILK------------LLHAFEV 329 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHH------------HHHHHHH
Confidence 34556667777888899999 999999999999999999988888887766 66777888 9999988
Q ss_pred hcccchhhhhhhhhccCccchhhhHhH-HHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc
Q psy6665 83 IAMGPSPAIVYITEVARPDLRGALICI-GPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 83 ~~~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~ 144 (420)
+ ...+....++.|.+|++.|++..+. .+....+|..+++.+.+.+ ||+..|.+.+++.++.
T Consensus 330 ~-~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~ 395 (420)
T PRK09528 330 P-FLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLF 395 (420)
T ss_pred H-HHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Confidence 8 6666577899999999999887665 5677788888888887776 8999999877776554
No 186
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.08 E-value=3.4e-08 Score=89.06 Aligned_cols=310 Identities=14% Similarity=0.118 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccc
Q psy6665 11 TVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGP 87 (420)
Q Consensus 11 ~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~ 87 (420)
+.-+..-.+++..++ ..+.|..|-|++++++.+...+...+..+. ...+-+.. +..|++.+ .-.
T Consensus 46 i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q------------~~yg~~~a-~ev 112 (412)
T PF01770_consen 46 IYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQ------------FFYGLATA-AEV 112 (412)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHH------------HHHHHHHH-HHH
Confidence 334444556666777 999999999999999999888888777777 77888888 99999998 654
Q ss_pred hhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh------hhHHHHHhHhhhcccc--------ccce-eeec
Q psy6665 88 SPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL------HWRTVAWLSLAYILIP--------SPVW-LLNK 152 (420)
Q Consensus 88 ~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~------~wr~~f~~~~~~~~~~--------~~~~-l~~~ 152 (420)
. -++|+--..|+++-.++.+...++.-+|..++.+++..+ +.+...++......+. .|.+ ...+
T Consensus 113 a-y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~ 191 (412)
T PF01770_consen 113 A-YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFH 191 (412)
T ss_pred H-HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCccccee
Confidence 4 789999999999999999999999999999999998876 3444443333221111 1111 1111
Q ss_pred CcHHHHHHHHHHHhcchh-hhhhhHHHHhhhccchhhhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhH
Q psy6665 153 GRANQALKSLKYLARNYK-EVKNKEQELKKMNSTKENQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYA 230 (420)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (420)
++.++... ..+...++. +.++...+.+.++.......+...+.+++ .+..+..+.++.-.++.....++++.+.+|.
T Consensus 192 r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYv 270 (412)
T PF01770_consen 192 RKPPAEQD-ANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYV 270 (412)
T ss_pred ccCccccc-cccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHH
Confidence 11111000 000000000 00000000000000011111222223333 3334445555556666677777788888898
Q ss_pred HHHHHhh---CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHHHHHHH
Q psy6665 231 VQFLEDM---GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVFCILFY 292 (420)
Q Consensus 231 ~~~~~~~---g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~~~~~~ 292 (420)
....++. +- ..--+..-....+.+.++.+..|++..++.+...+.++... +-+.......++
T Consensus 271 Q~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif 350 (412)
T PF01770_consen 271 QSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIF 350 (412)
T ss_pred HHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8888776 22 33345566666777888888889886666554333322221 112222222222
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFAL 336 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~ 336 (420)
...+.+ ..++...-++.....+.-+..+|++.+...+...+-.
T Consensus 351 ~~~y~f-liTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtilT 393 (412)
T PF01770_consen 351 RSLYMF-LITIASFQIAKNLSEERYALVFGINTFVALVLQTILT 393 (412)
T ss_pred HHHHHH-HHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHheE
Confidence 222222 2333344444444555567777777776666555443
No 187
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.08 E-value=5.6e-09 Score=99.72 Aligned_cols=148 Identities=13% Similarity=0.089 Sum_probs=99.2
Q ss_pred HHHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhhHhhhccc----------h
Q psy6665 215 FALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT-YGRRSLTMFSQIE----------K 281 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~----------~ 281 (420)
..+....+++.+..+.+.|+++. |+ ..++...............+++|+++|| +|||+.+..+..+ .
T Consensus 29 ~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~ 108 (500)
T PRK09584 29 IELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS 108 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh
Confidence 33344445677888899998654 77 5555555555544445556789999999 5999988877665 1
Q ss_pred -hHHHHHHHH-HHHHHHhhchhhHHHHHhcccCChhh--hhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHH
Q psy6665 282 -SLIPVFCIL-FYVAISVIGMLSIPWTMTAEIFPLEI--RGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFA 357 (420)
Q Consensus 282 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~--r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~ 357 (420)
+....+... ...+.......+...++..|.+|++. |..+.++.+...++|..++|.+.|++.++.| ++..|.+.+
T Consensus 109 ~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~~~~F~i~~ 187 (500)
T PRK09584 109 GHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-WSVAFALSV 187 (500)
T ss_pred cccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-HHHHHHHHH
Confidence 111111121 22222222234555688899998543 4567888899999999999999999999998 888888766
Q ss_pred HHHHHH
Q psy6665 358 LISVIS 363 (420)
Q Consensus 358 ~~~~~~ 363 (420)
+...++
T Consensus 188 i~~~i~ 193 (500)
T PRK09584 188 VGMLIT 193 (500)
T ss_pred HHHHHH
Confidence 544443
No 188
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.06 E-value=7.9e-09 Score=96.26 Aligned_cols=142 Identities=6% Similarity=0.004 Sum_probs=102.5
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVFC 288 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~~ 288 (420)
.......|.+.++.|. ..+.+.......++..++++..|++.||+|||+.+..+..+ .++..+..
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~ 99 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLV 99 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 3344666777776688 78889999999999999999999999999999998887766 01211222
Q ss_pred HHHHHHHHhhc-hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh----------------------
Q psy6665 289 ILFYVAISVIG-MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS---------------------- 345 (420)
Q Consensus 289 ~~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~---------------------- 345 (420)
. .+..+.+.+ ..+...+++.+..|+++|++..++.+....+|..++|.+.+.+...
T Consensus 100 ~-~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (410)
T TIGR00885 100 G-LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIK 178 (410)
T ss_pred H-HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHH
Confidence 2 222222222 2344457788888999999999999999999999999998877532
Q ss_pred ----cCcchHHHHHHHHHHHHHHHHh
Q psy6665 346 ----VGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 346 ----~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
.+ ++.++.+.+++.++..++.
T Consensus 179 ~~~~~~-w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 179 HSDLAS-VQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 23 5667777777666554443
No 189
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.03 E-value=1.8e-08 Score=94.24 Aligned_cols=170 Identities=12% Similarity=0.057 Sum_probs=116.6
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhh----ccCchhhHhhhccc
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLR----TYGRRSLTMFSQIE 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~~~~ 280 (420)
++++..+......++. ......+.+.|+++.|. +...+.......+.+++..++.|.++| |+|||+.++.....
T Consensus 4 ~~li~~~~~~~Giq~~-~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 4 RKLLRVASVAAGVQFG-WALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 3445555555555654 55566777778888888 788888888999999999999999999 59999988765333
Q ss_pred ------------hhH--------------H--HHHHHHHHHHHHhh-chhhHHHHHhcccCChhhh--hhhHHHHHHHHH
Q psy6665 281 ------------KSL--------------I--PVFCILFYVAISVI-GMLSIPWTMTAEIFPLEIR--GIAQGLTFCLAH 329 (420)
Q Consensus 281 ------------~~~--------------~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~r--~~~~g~~~~~~~ 329 (420)
... . ......+...-+.. ...+...+++.|.+|+++| +.+.++.+....
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 000 0 01111111111111 1233445899999998865 679999999999
Q ss_pred HHHHHHHHHhHHH--HHhcC------------cchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 330 ILMFFALQYYPWF--KDSVG------------GSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 330 ~~~~~~~~~~g~l--~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
+|+.+++.+.+.. .+..+ +....|.+.+++.++..++..+..+|...
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~ 223 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPL 223 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCC
Confidence 9999999988764 22221 25667888888888888888888888643
No 190
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.03 E-value=1.4e-08 Score=94.45 Aligned_cols=152 Identities=12% Similarity=0.047 Sum_probs=96.8
Q ss_pred chhhHHHhHHHHHHh-hCC-cchHHHHHHHHHH-HHHHHHHHHHHhhhccCchhhHh-hhccc-----------hhHHHH
Q psy6665 222 GIYITIFYAVQFLED-MGS-RMNVYLATVLVGV-VRMVFGLLTSQLLRTYGRRSLTM-FSQIE-----------KSLIPV 286 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~g~~~~~~-~~~~~-----------~~~~~~ 286 (420)
+........|.++.+ .|. ..+.+.......+ ..+.+.+.+++ .||+|||+.++ .+... .+...+
T Consensus 30 ~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l 108 (393)
T PRK15011 30 AGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVL 108 (393)
T ss_pred HHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 345566677777655 487 6677776555545 44455555566 99999987644 33222 122222
Q ss_pred HHHHHHHHHHhhchhhHHHHHhcccCChhhh--hhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHH
Q psy6665 287 FCILFYVAISVIGMLSIPWTMTAEIFPLEIR--GIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISI 364 (420)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r--~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 364 (420)
........+......|....+..|..+++.| +...++.+....+|..++|.+.+.+.++.| ++..|++.++.+++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~~f~~~~~~~~~~~ 187 (393)
T PRK15011 109 LFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTVMYLSAAVAFIVCG 187 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHHHHHHHHHHHHHHH
Confidence 2222222223333455555666676655444 334577888889999999999999999999 8888888888777777
Q ss_pred HHhhhccccCC
Q psy6665 365 VYVYIFLPETH 375 (420)
Q Consensus 365 ~~~~~~~~~~~ 375 (420)
+..++..||.+
T Consensus 188 ~~~~~~~~~~~ 198 (393)
T PRK15011 188 VMVWLFLPSMR 198 (393)
T ss_pred HHHHhhcCccC
Confidence 76666677654
No 191
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.02 E-value=4.7e-09 Score=93.23 Aligned_cols=164 Identities=16% Similarity=0.122 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------
Q psy6665 208 LLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------ 280 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------ 280 (420)
.++.....+...++.-+.+....+.+-++.|+ +.|.+++.....+.+.+.++..|++.||+|.|+....+.++
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~ 94 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCL 94 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHH
Confidence 33334344444333334444455555566688 89999999999999999999999999999999888777766
Q ss_pred --------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc--ch
Q psy6665 281 --------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG--SA 350 (420)
Q Consensus 281 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~--~~ 350 (420)
.+...++.+.++.+ ...+...+...++++.+|++++|.++|+.. .+++|..+..++.+.+....|. ++
T Consensus 95 ~~~~a~~~~~~~~ll~~gll~G-~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~ 172 (417)
T COG2223 95 GLAFAVTYPSTWQLLVIGLLLG-LAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWR 172 (417)
T ss_pred HHHHHccCCchHHHHHHHHHHh-cccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHH
Confidence 12223333333333 333445566789999999999999999999 9999999999999998888873 56
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc
Q psy6665 351 MVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
....++....++..+..++...+
T Consensus 173 ~~~~i~~~~l~v~~v~~~~~~~d 195 (417)
T COG2223 173 NVAGIYVVALAIAAVLAWLGMND 195 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 67777777777777777666544
No 192
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.02 E-value=2e-08 Score=94.61 Aligned_cols=147 Identities=14% Similarity=0.099 Sum_probs=93.5
Q ss_pred HHHHhcchhhHHHhHHHHHHhhC---C-cch---HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------
Q psy6665 216 ALQQLAGIYITIFYAVQFLEDMG---S-RMN---VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------- 280 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g---~-~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------- 280 (420)
..........+....|.+.++.+ . ..+ .........++..+++++.|+++||+|||+.+..+...
T Consensus 31 ~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~ 110 (432)
T PRK10406 31 NLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI 110 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 33333344555555565555542 2 222 22334445566669999999999999999998877766
Q ss_pred ---hhHH--------HHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH-----
Q psy6665 281 ---KSLI--------PVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD----- 344 (420)
Q Consensus 281 ---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~----- 344 (420)
.+.. .+...-+..+....+..+...+++.|.+|+++|+...++.......|..+++.+...+..
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 190 (432)
T PRK10406 111 ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA 190 (432)
T ss_pred hhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 1111 122222233333334467778999999999999999998887777777777766544432
Q ss_pred ---hcCcchHHHHHHHHHHHHH
Q psy6665 345 ---SVGGSAMVQWFFALISVIS 363 (420)
Q Consensus 345 ---~~g~~~~~~~~~~~~~~~~ 363 (420)
..| |+..|.+.++..++.
T Consensus 191 ~~~~~g-Wr~~F~i~~~~~ll~ 211 (432)
T PRK10406 191 ELREWG-WRIPFALGAVLAVVA 211 (432)
T ss_pred HHhccc-hHHHHHHHHHHHHHH
Confidence 456 888887766655544
No 193
>TIGR00898 2A0119 cation transport protein.
Probab=99.01 E-value=7.7e-09 Score=99.59 Aligned_cols=142 Identities=14% Similarity=0.202 Sum_probs=103.2
Q ss_pred hHHHHHHhhCC----cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHH
Q psy6665 229 YAVQFLEDMGS----RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYV 293 (420)
Q Consensus 229 ~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~ 293 (420)
+.|.+.++.++ +.+.+...+...++.+++.++.|+++||+|||+.+..+.++ .+...+....++.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 34555555455 24567888889999999999999999999999998877665 2333333344444
Q ss_pred HHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcccc
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
+....+..+...+++.|.+|++.|+.+.++......+|..++|.+...+.+ ++..+++.++..++..+.. +++||
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~-~~~~e 265 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLS-WFVPE 265 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 444444477778999999999999999999988888888888887655443 5677777777666665554 56777
Q ss_pred CC
Q psy6665 374 TH 375 (420)
Q Consensus 374 ~~ 375 (420)
+.
T Consensus 266 sp 267 (505)
T TIGR00898 266 SP 267 (505)
T ss_pred Ch
Confidence 53
No 194
>KOG0569|consensus
Probab=99.00 E-value=1.4e-08 Score=93.89 Aligned_cols=132 Identities=17% Similarity=0.131 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHHHHHHHHHHHhhchhhHHHHHhc
Q psy6665 244 YLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVFCILFYVAISVIGMLSIPWTMTA 309 (420)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
+.......+++++|+++.++++||+|||..+.++.++ .....++..-+..+............++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~ 142 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLT 142 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 3556777899999999999999999999887777665 22222222223333222222345558899
Q ss_pred ccCChhhhhhhHHHHHHHHHHHHHHHHHHh-HHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 310 EIFPLEIRGIAQGLTFCLAHILMFFALQYY-PWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 310 ~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~-g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
|+.|.+.||....+......+|..++..+. +.+..... .|.....+..+..+..++...+.||+.+
T Consensus 143 E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~-~W~~l~~~~~i~~~~~l~~l~~~PESPk 209 (485)
T KOG0569|consen 143 EISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTED-LWPYLLAFPLIPALLQLALLPFLPESPK 209 (485)
T ss_pred hcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCc-chHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 999999999999999999888888885544 33333322 2223333333434444445578898754
No 195
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.99 E-value=9.2e-09 Score=90.16 Aligned_cols=226 Identities=12% Similarity=0.049 Sum_probs=133.6
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
|.+..++...+..++...++..++ |.++||+|||+.-+.-.++.+++++..-.. ++.++++| ++.|
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GR------------vlgG 132 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGR------------VLGG 132 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHH------------HHHH
Confidence 556677888888888888888888 999999999999999999999999877777 99999999 9999
Q ss_pred HHhhcccchhhhh-hhhhcc----CccchhhhHhHHH-HHHHHHHHHHHHHhhhh----h--hHHHHHhHhhhccccccc
Q psy6665 80 ISVIAMGPSPAIV-YITEVA----RPDLRGALICIGP-SITSLGMVIVYALGAVL----H--WRTVAWLSLAYILIPSPV 147 (420)
Q Consensus 80 ~~~~~~~~~~~~~-~i~e~~----~~~~r~~~~~~~~-~~~~lG~~~~~~~~~~~----~--wr~~f~~~~~~~~~~~~~ 147 (420)
++.. ....+--+ ++.|+- |++..+...+... ..+++-.+.+..++..+ + -..+|....+..++. .
T Consensus 133 iaTS-LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~--~ 209 (354)
T PF05631_consen 133 IATS-LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA--A 209 (354)
T ss_pred HHHH-HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH--H
Confidence 9999 55553443 455553 3333333333333 22233334444444443 2 255676666555544 0
Q ss_pred eeeecCcHHHHHHHHHHHhcchhhhhhhHHHHhhhccchhhhhhhhHHHHHhhccccchHHHHHHHHHHHHHhcchhhHH
Q psy6665 148 WLLNKGRANQALKSLKYLARNYKEVKNKEQELKKMNSTKENQSLSARLIKMVTMATGIKPLLVITVLFALQQLAGIYITI 227 (420)
Q Consensus 148 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (420)
.++.+.- .++..+. .++.+...+.++.++ .-..-++.+.......++....+..+.
T Consensus 210 ~~I~~~W-----------~ENyg~~------------~~~~~~~~~~~~a~~-~i~~d~ril~LG~~qslFE~smy~FVf 265 (354)
T PF05631_consen 210 VLILKTW-----------PENYGDT------------SSSSSLSGSFREAWR-AILSDPRILLLGLIQSLFEGSMYLFVF 265 (354)
T ss_pred HHHHhcc-----------cccCCCc------------ccccchHHHHHHHHH-HHHcCchhHHHHHHHHHHHHHHHHhee
Confidence 0000000 0000000 000001111222221 000113445556666677766566667
Q ss_pred HhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy6665 228 FYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRT 267 (420)
Q Consensus 228 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 267 (420)
.|.|.+-.+ +-...-+.++..+.+..++|+.+...+..+
T Consensus 266 lWtPaL~~~-~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 266 LWTPALDPD-DEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred eeeceecCC-CCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 788887632 223346778888888899999888665543
No 196
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.98 E-value=5.1e-08 Score=89.27 Aligned_cols=164 Identities=9% Similarity=0.033 Sum_probs=112.6
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cch-HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMN-VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--- 280 (420)
+..+..|...++..+ =....+..|.+.++.|+ ..+ .+.+...+..+..+..+.+|+++||+|.|+++..+.+.
T Consensus 27 ~~~~~lC~fGF~~e~--R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 27 VLVLYLCFYGFMAQF--RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHHHHHh--hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 334444444444443 33455566776677799 777 88999999999999999999999999999998888776
Q ss_pred --------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHH
Q psy6665 281 --------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMV 352 (420)
Q Consensus 281 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~ 352 (420)
.+...+.+.-++.+....+.. ....++...+|+++|+++.|+.+....+|.++++++.+. ....| +...
T Consensus 105 ~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~g-Wr~y 181 (511)
T TIGR00806 105 VWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLG-WISY 181 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcC-chhH
Confidence 223333333333333333334 667899999999999999999999999999999999999 55566 4433
Q ss_pred HH--HHHHHHHHHHHHhhhccccC
Q psy6665 353 QW--FFALISVISIVYVYIFLPET 374 (420)
Q Consensus 353 ~~--~~~~~~~~~~~~~~~~~~~~ 374 (420)
.. .+...+....++..+++|..
T Consensus 182 ~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 182 STLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCC
Confidence 22 22333333333334566643
No 197
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.98 E-value=2.5e-08 Score=94.82 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=100.8
Q ss_pred HHHHHHhh-CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hhHHHHHHHHHH
Q psy6665 230 AVQFLEDM-GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KSLIPVFCILFY 292 (420)
Q Consensus 230 ~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~~~~~~~~~~~ 292 (420)
.+.+..+. +-+...+.......+-.++.++++|.++||++||++++.+-.+ .+.+.++.+.+.
T Consensus 33 ~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl 112 (524)
T PF05977_consen 33 LAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFL 112 (524)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 33444343 3356667777777888889999999999999999998877654 122223333334
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
.+.......|...+.+.|++|+++...++++.+...++...+||.+.|.+....| ....|.+-++..++..+..
T Consensus 113 ~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G-~~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 113 LGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG-AAAAFLINALSFLISILAL 186 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 4444444467878999999999999999999999999999999999999999988 7777776665555544433
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.97 E-value=2.4e-08 Score=91.59 Aligned_cols=149 Identities=14% Similarity=0.076 Sum_probs=99.4
Q ss_pred hHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-----CchhhHh-hhccc-----------h---hH
Q psy6665 225 ITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-----GRRSLTM-FSQIE-----------K---SL 283 (420)
Q Consensus 225 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~~~-~~~~~-----------~---~~ 283 (420)
....-.|.+.++.|+ ..+.+..... .+...+ .++.|+++||+ |||+.++ .+... . +.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 345567888888888 6666666533 343443 88999999998 7888643 32222 1 11
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc-------chHHHHHH
Q psy6665 284 IPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG-------SAMVQWFF 356 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~-------~~~~~~~~ 356 (420)
..+....+..........+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..|. ++..+++.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ 163 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWT 163 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHH
Confidence 11222222222223333455668899999999999999999999999999999999988877662 66778777
Q ss_pred HHHHHHHHHHhhhccccCC
Q psy6665 357 ALISVISIVYVYIFLPETH 375 (420)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~ 375 (420)
++..++..+..++..||+.
T Consensus 164 ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 164 ALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHhccCCC
Confidence 7766666555544456643
No 199
>PTZ00207 hypothetical protein; Provisional
Probab=98.96 E-value=5.7e-08 Score=92.86 Aligned_cols=148 Identities=11% Similarity=0.015 Sum_probs=96.1
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------h-------hH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------K-------SL 283 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~-------~~ 283 (420)
..+.+..+.+.+.++.|+ ..+.+....... ......++.|++.||+|+|+++.++.++ . +.
T Consensus 42 ~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~ 120 (591)
T PTZ00207 42 FMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSV 120 (591)
T ss_pred HHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcH
Confidence 356677788888777788 666666555433 3334566789999999999999888776 1 11
Q ss_pred HHHHHHHHHHHHHhhc-hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHH
Q psy6665 284 IPVFCILFYVAISVIG-MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVI 362 (420)
Q Consensus 284 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 362 (420)
..+.+... ..+.+.+ ..+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .+ +...+++.+++.++
T Consensus 121 ~~l~l~r~-l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~-~~~~fl~l~vl~~v 196 (591)
T PTZ00207 121 VRLSVYNG-LMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DN-TSAYFFFLMSFALV 196 (591)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-HHHHHHHHHHHHHH
Confidence 11111111 2222222 23444566778887 679999999999999999864444443333 23 56777777887777
Q ss_pred HHHHhhhccccC
Q psy6665 363 SIVYVYIFLPET 374 (420)
Q Consensus 363 ~~~~~~~~~~~~ 374 (420)
.+++.+.+++..
T Consensus 197 v~ll~~~~vr~p 208 (591)
T PTZ00207 197 VGILAIVFMRLP 208 (591)
T ss_pred HHHHHHhheeCC
Confidence 777766666544
No 200
>PRK15075 citrate-proton symporter; Provisional
Probab=98.96 E-value=2.5e-08 Score=93.97 Aligned_cols=148 Identities=12% Similarity=0.016 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHH-HHHH-----HHHHHHHHHHHHHHHhhhccCchhhHhhhccc
Q psy6665 208 LLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVY-LATV-----LVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE 280 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~-~~~~-----~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 280 (420)
.....++..+........+....|.+.++.+. +.+.. .... ...+...++.++.|+++||+|||+.++.+..+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 34444555555555567788888888888766 43322 2211 11233357889999999999999998887765
Q ss_pred -----------hhHHH--------HHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHH
Q psy6665 281 -----------KSLIP--------VFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPW 341 (420)
Q Consensus 281 -----------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~ 341 (420)
.+... ++...++.+.......+....++.|.+|+++|+++.++.....+++..+++.+.+.
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12111 11222222222222345556899999999999999999999888888877777666
Q ss_pred HH--------HhcCcchHHHHHH
Q psy6665 342 FK--------DSVGGSAMVQWFF 356 (420)
Q Consensus 342 l~--------~~~g~~~~~~~~~ 356 (420)
+. +..| |+..|++.
T Consensus 176 l~~~~~~~~~~~~g-Wr~~f~~~ 197 (434)
T PRK15075 176 LNQWLSPAQMAEWG-WRIPFLIG 197 (434)
T ss_pred HHHhCCHHHHhccc-hHHHHHHH
Confidence 53 4566 77777653
No 201
>KOG3764|consensus
Probab=98.96 E-value=1.3e-09 Score=95.58 Aligned_cols=137 Identities=12% Similarity=0.139 Sum_probs=115.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhHHHHHh
Q psy6665 240 RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSIPWTMT 308 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
..+.+..+....+.+++.+++.|.+.||+|+|..++.++.. +.+..++..-.+.+..+........+++
T Consensus 105 ~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglaml 184 (464)
T KOG3764|consen 105 NTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAML 184 (464)
T ss_pred ccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHH
Confidence 67788999999999999999999999999999999888877 4445555555555555555556667999
Q ss_pred cccCChhh-hhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCCC
Q psy6665 309 AEIFPLEI-RGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHGR 377 (420)
Q Consensus 309 ~~~~p~~~-r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (420)
++.+|+++ |++++|+.-.+..+|..++|.+.|.+++..| +..+|.+.+.++++-..+.++.++.++.+
T Consensus 185 Ad~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 185 ADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 99999776 6999999999999999999999999999999 99999999999999998887766654443
No 202
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.96 E-value=1.6e-08 Score=94.25 Aligned_cols=154 Identities=8% Similarity=0.099 Sum_probs=99.9
Q ss_pred HHHHhcchhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----hhHH----
Q psy6665 216 ALQQLAGIYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----KSLI---- 284 (420)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----~~~~---- 284 (420)
.+....+......+.|.++.+. |. +.+.+.......+...++.++.|+++||+|||+.+..+... ....
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 90 (396)
T TIGR00882 11 FFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVF 90 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333334556667888888764 88 88889999999999999999999999999999998765443 0000
Q ss_pred -------HHHHHH---HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHH
Q psy6665 285 -------PVFCIL---FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQW 354 (420)
Q Consensus 285 -------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~ 354 (420)
...... +..........+....+..|.. +.++...|.......+|..++|.+.|.+.+ .+ ++..|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~-~~~~f~ 166 (396)
T TIGR00882 91 GPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID-PQIVFW 166 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC-chHHHH
Confidence 000001 1111111112233334444432 233556788888889999999999988765 46 788888
Q ss_pred HHHHHHHHHHHHhhhcccc
Q psy6665 355 FFALISVISIVYVYIFLPE 373 (420)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (420)
+.+++.++..++.+...++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~ 185 (396)
T TIGR00882 167 LGSGFALILMLLLMFAKPK 185 (396)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 8887777766655444443
No 203
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.95 E-value=3.4e-08 Score=92.12 Aligned_cols=155 Identities=16% Similarity=0.206 Sum_probs=109.2
Q ss_pred HHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-----Cchh-hHhhhccc---------
Q psy6665 217 LQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-----GRRS-LTMFSQIE--------- 280 (420)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~-~~~~~~~~--------- 280 (420)
+.+.........-+|.++++.|+ .++.+........ .+..++.|+++||+ |||| .+..+...
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~ 86 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMA 86 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHH
Confidence 34444566677888999999999 7777777555444 68899999999999 7765 44444333
Q ss_pred -h----hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc-CcchHHHH
Q psy6665 281 -K----SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV-GGSAMVQW 354 (420)
Q Consensus 281 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-g~~~~~~~ 354 (420)
. +...+....+....+.....+...+++.|.+|+++|+++.++......++..+++.+.+.+.+.. | ++..++
T Consensus 87 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w~~~f~ 165 (402)
T PRK11902 87 FCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-WGNTYL 165 (402)
T ss_pred hcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-HHHHHH
Confidence 1 12222222222233333345666799999999999999999999999999999999998888864 6 888888
Q ss_pred HHHHHHHHHHHHhhhccccCC
Q psy6665 355 FFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~ 375 (420)
+.+++.++..+. .+..||++
T Consensus 166 i~a~~~l~~~l~-~~~~~e~~ 185 (402)
T PRK11902 166 LMAGLMLAGALT-TLWAPEPE 185 (402)
T ss_pred HHHHHHHHHHHH-HHhcCCCc
Confidence 888777665554 34556553
No 204
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.94 E-value=3.3e-08 Score=91.49 Aligned_cols=135 Identities=10% Similarity=0.058 Sum_probs=97.6
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch----hhHhhhccc---------hhHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR----SLTMFSQIE---------KSLIPVF 287 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~~~---------~~~~~~~ 287 (420)
.......+.|.++++.|. ..+.+.......+...++.++.+.++||++|+ +.+..+..+ ++...++
T Consensus 19 ~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 98 (382)
T TIGR00902 19 AYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFSAGAHNAWLLF 98 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 345677788899998898 88889999999999999999999999999974 333222221 2222232
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHH
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALI 359 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 359 (420)
........+.....|...++..+. +++|+..+|.......+|..++|.+.+.+.++.| ++..+.+...+
T Consensus 99 ~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f~~~~~~ 167 (382)
T TIGR00902 99 IAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNILAILTAG 167 (382)
T ss_pred HHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHH
Confidence 222222333333456666665543 4678999999999999999999999999999999 88777766554
No 205
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.93 E-value=5.8e-08 Score=92.73 Aligned_cols=150 Identities=19% Similarity=0.251 Sum_probs=103.3
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-----Cchhh-Hhhhccc--------------
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-----GRRSL-TMFSQIE-------------- 280 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----g~~~~-~~~~~~~-------------- 280 (420)
.........|.++++.|. ..+.+.... .+.. .++.++.++++||+ |||+. +..+.+.
T Consensus 27 ~~~~~~~~l~~~l~~~g~~~~~ig~~~~-~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~ 104 (491)
T PRK11010 27 PLALTSGTLQAWMTVENIDLKTIGFFSL-VGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPG 104 (491)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHH-HHHH-HHHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCc
Confidence 455666678888888777 445555422 2222 26889999999999 98875 3333332
Q ss_pred hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH-hcCcchHHHHHHHHH
Q psy6665 281 KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD-SVGGSAMVQWFFALI 359 (420)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~-~~g~~~~~~~~~~~~ 359 (420)
.+...+....+....+.....+...++..|.+|+++|+++.++......+|..+++.+.+++.+ ..| |+..|++.+++
T Consensus 105 ~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G-Wr~~f~i~a~l 183 (491)
T PRK11010 105 TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG-WQGMYWLMAAL 183 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-HHHHHHHHHHH
Confidence 1122222233333333334455666899999999999999999999999999999999999888 457 89999888887
Q ss_pred HHHHHHHhhhccccCC
Q psy6665 360 SVISIVYVYIFLPETH 375 (420)
Q Consensus 360 ~~~~~~~~~~~~~~~~ 375 (420)
.++..+..+ +.||+.
T Consensus 184 ~ll~~l~~~-~~~e~~ 198 (491)
T PRK11010 184 LIPCIIATL-LAPEPT 198 (491)
T ss_pred HHHHHHHHH-hcCCCc
Confidence 777655543 456653
No 206
>PRK09952 shikimate transporter; Provisional
Probab=98.93 E-value=7.6e-08 Score=90.77 Aligned_cols=112 Identities=13% Similarity=0.059 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHH--------HHHHHHHHHHHHhhchhhHHHHHhcc
Q psy6665 250 VGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLI--------PVFCILFYVAISVIGMLSIPWTMTAE 310 (420)
Q Consensus 250 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (420)
..++..+++++.|+++||+|||+.+..+..+ ++.. .++..-+..+....+..+....++.|
T Consensus 73 ~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e 152 (438)
T PRK09952 73 GFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVE 152 (438)
T ss_pred HHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 3455678889999999999999998887666 1211 12222233333333445666789999
Q ss_pred cCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH--------hcCcchHHHHHHHHHHHH
Q psy6665 311 IFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD--------SVGGSAMVQWFFALISVI 362 (420)
Q Consensus 311 ~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~--------~~g~~~~~~~~~~~~~~~ 362 (420)
.+|+++|+...+..+....+|..+++.+...+.. ..| |+..|.+.++..++
T Consensus 153 ~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~ 211 (438)
T PRK09952 153 SAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLI 211 (438)
T ss_pred hCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHH
Confidence 9999999999999988888888888777666543 356 77788766655433
No 207
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.92 E-value=3.6e-08 Score=93.73 Aligned_cols=142 Identities=15% Similarity=0.177 Sum_probs=99.4
Q ss_pred HhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHH
Q psy6665 228 FYAVQFLEDMGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAIS 296 (420)
Q Consensus 228 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 296 (420)
.-++.+..+.|-..+..++.....+...++.++.|.++|.+|||..++.+.++ ++...++....+. +.
T Consensus 65 ~~l~~I~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~-Gv 143 (599)
T PF06609_consen 65 SILPYINADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY-GV 143 (599)
T ss_pred HHHHHHHHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH-HH
Confidence 34566666766666677777888899999999999999999999998887776 2233333322222 23
Q ss_pred hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 297 VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 297 ~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
+.+........++|+.|.+.|..+.++.....-.....+|.+...+..+.+ |++.+++.++...++++..++++
T Consensus 144 gaG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 144 GAGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred hhHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHHHHHHHHHHHHHHh
Confidence 344444555678999999999888777766554555567777666555555 99999888888777776655544
No 208
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=9.7e-08 Score=89.83 Aligned_cols=121 Identities=8% Similarity=0.006 Sum_probs=88.5
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVF 287 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~ 287 (420)
......+.|.+.++.|. +.+.+.......++..++.++.|++.||+|||+++..+..+ .++..+.
T Consensus 42 ~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll 121 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFL 121 (438)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 45667778888666688 88889999999999999999999999999999998888766 1111122
Q ss_pred HHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHH
Q psy6665 288 CILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFK 343 (420)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~ 343 (420)
...+..+.......+....++.|..|++.|....++.+....+|..++|.+.+.+.
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222234455577778777776667899999999999999998877654
No 209
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.91 E-value=4.3e-08 Score=103.79 Aligned_cols=131 Identities=17% Similarity=0.137 Sum_probs=94.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhcc---c-----------hhHHHHHHHHHHHHHHhhchhhHHHHH
Q psy6665 242 NVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQI---E-----------KSLIPVFCILFYVAISVIGMLSIPWTM 307 (420)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~---~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
..++......+..++.++++|.++||++||+++..... . .++..+++..++.+.......|...++
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~ 132 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI 132 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh
Confidence 34566667788889999999999999999987532111 1 223334444444444444567888899
Q ss_pred hcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 308 TAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 308 ~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
+.+.+|++.++.++|+.+....++..++|.+.|++.+..+ +...+ +..++..+..+++...++++
T Consensus 133 l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 197 (1140)
T PRK06814 133 LPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVILV-ALLMGIAVLGWLASLFIPKT 197 (1140)
T ss_pred hHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHH-HHHHHHHHHHHHHHhhCCCC
Confidence 9999999999999999999999999999999999999887 66666 44333333334444455544
No 210
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.90 E-value=3.6e-08 Score=91.32 Aligned_cols=147 Identities=11% Similarity=0.085 Sum_probs=101.3
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCch----hhHhhhccc---------hhHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRR----SLTMFSQIE---------KSLIPVFC 288 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~----~~~~~~~~~---------~~~~~~~~ 288 (420)
......++|.++++.|. ..+.+...+...+...++.++.|++.||++|+ +.+...... ++.+.+..
T Consensus 20 ~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 99 (382)
T PRK11128 20 YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAVAFWFGAHSFWLLFV 99 (382)
T ss_pred HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 45567788899988888 88899999999999999999999999999983 333222211 22222222
Q ss_pred HHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 289 ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.............|...++..+. .++|+.+.+.......+|..++|.+.+.+.++.| ++..+++.++..++..+. .
T Consensus 100 ~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~~~~~~~~~~-~ 175 (382)
T PRK11128 100 AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILTAGVASMLLG-Q 175 (382)
T ss_pred HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHHHHHHHHHHH-H
Confidence 22222332333455555665554 3557888999999999999999999999999999 888887766544444332 3
Q ss_pred hcccc
Q psy6665 369 IFLPE 373 (420)
Q Consensus 369 ~~~~~ 373 (420)
+..||
T Consensus 176 ~~~~~ 180 (382)
T PRK11128 176 LLRPT 180 (382)
T ss_pred HccCC
Confidence 33444
No 211
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.90 E-value=7.2e-07 Score=82.07 Aligned_cols=317 Identities=12% Similarity=0.089 Sum_probs=158.8
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHhhHHHHHHHHHHHHhHHHHHhhccc---cccchhHHHHHHHHHHhhc-ccc-hhhh
Q psy6665 17 VRMVFGLLTSQLLRTYGRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQIE---KSLIPVFCILFYVAISVIA-MGP-SPAI 91 (420)
Q Consensus 17 ~g~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~l~G~~~~~-~~~-~~~~ 91 (420)
...++++.+|.+.||..|.++.-.+.+..-++..+.+..+..++..+.. .++....++..+..+++-. ... ....
T Consensus 50 ~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~i 129 (432)
T PF06963_consen 50 SAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTI 129 (432)
T ss_pred HHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3334444449999999999999999888877776666552222222211 1222222222222222210 111 1122
Q ss_pred hhhhhcc------CccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc-ccceeeecCcHHHHHH
Q psy6665 92 VYITEVA------RPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP-SPVWLLNKGRANQALK 160 (420)
Q Consensus 92 ~~i~e~~------~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~-~~~~l~~~~~~~~~~~ 160 (420)
+.=.||. +++.+.+..+.+.-.--+..+++|++.+.+ +.+....+.+...++. .+.++..++-++....
T Consensus 130 avERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~ 209 (432)
T PF06963_consen 130 AVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPA 209 (432)
T ss_pred eeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 2233443 344455666666555566777777777665 5565555555555544 2222222111111110
Q ss_pred HHHHHhcchhhhhhhHHHHhh--hccchh----hhhhhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhHHHH
Q psy6665 161 SLKYLARNYKEVKNKEQELKK--MNSTKE----NQSLSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYAVQF 233 (420)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (420)
++.+++..+....+.+. ++..++ ++.++..+...+ ++..++.+.+...+...+.++. ...+...+..|
T Consensus 210 ----L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~lmt~y 284 (432)
T PF06963_consen 210 ----LAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGLMTAY 284 (432)
T ss_pred ----hcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHHHHHH
Confidence 11111000000000000 000000 001111222211 1112223333333332222222 33345566777
Q ss_pred HHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------------hh--HHHHHHHHHHHH
Q psy6665 234 LEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------KS--LIPVFCILFYVA 294 (420)
Q Consensus 234 ~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------~~--~~~~~~~~~~~~ 294 (420)
+...|+ +...+..-....+.++.+..+..++.+|+|..+.-.++... .+ ......+.....
T Consensus 285 l~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~ 364 (432)
T PF06963_consen 285 LKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIA 364 (432)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHH
Confidence 777799 77888888999999999999999999999988765555443 11 122111111111
Q ss_pred HH---hhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHH
Q psy6665 295 IS---VIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQY 338 (420)
Q Consensus 295 ~~---~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 338 (420)
.. -.++-.....+..|..|+++||...|+-+..+++...+.-.+
T Consensus 365 ~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 365 LSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 11 112222334677899999999999999999998877765433
No 212
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.89 E-value=1.3e-08 Score=94.51 Aligned_cols=128 Identities=15% Similarity=0.130 Sum_probs=91.1
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHH--HHHHh----HHHHHhhccccccchhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMT--TSGYY----TQLIMTGQIEKSLIPVFCI 74 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~--~~~~~----~~~~~~~r~~~~~~~~~~~ 74 (420)
|.+........+...++..++.++ |+++||+|||+.+..+..+..+..+ ...+. .+.+....
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 319 (394)
T TIGR00883 251 GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLV----------- 319 (394)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH-----------
Confidence 344555666677778888999999 9999999999988765544443331 11111 33334444
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhH-HHHHHHHHHHHHHHHhhhh----h-hHHHHHhHhhhcc
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICI-GPSITSLGMVIVYALGAVL----H-WRTVAWLSLAYIL 142 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~-~~~~~~lG~~~~~~~~~~~----~-wr~~f~~~~~~~~ 142 (420)
++.|++.+ ...+...+++.|.+|+++|+++.++ .+.+..+|..++|.+++.+ + |+..++......+
T Consensus 320 -~~~g~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 320 -LGLALIGG-MYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred -HHHHHHHH-HHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 78888887 5666689999999999999999998 4556667888888887765 5 8887777665543
No 213
>KOG0255|consensus
Probab=98.86 E-value=4.2e-08 Score=94.81 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=106.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhHHHHHh
Q psy6665 240 RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSIPWTMT 308 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
........+++.++.++|+++.|+++||+|||++++++.++ .++....+.-++.+++..+...+.+.+.
T Consensus 117 ~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 117 STLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 45566778888999999999999999999999999988887 4555566666677777777777888999
Q ss_pred cccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 309 AEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 309 ~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
.|++++++|+.+..+ ......++.++|...+++.+ + |++.+++.....++..+. +++.+|.+
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~~~~~-~~l~~Es~ 258 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGLFLLL-WFLPPESP 258 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHH-HHccCcCh
Confidence 999999999999999 88888999999999998887 4 778888777777766665 45555653
No 214
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.86 E-value=7.1e-08 Score=102.45 Aligned_cols=103 Identities=10% Similarity=0.136 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc--------------hhHHHHHHHHHHHHHHhhchhhHHHHHh
Q psy6665 243 VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE--------------KSLIPVFCILFYVAISVIGMLSIPWTMT 308 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
.++..+...+..+++++++|+++||+|||+++..+.++ .+...+++..++.+.......+...+++
T Consensus 49 ~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 128 (1146)
T PRK08633 49 TAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGII 128 (1146)
T ss_pred HHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhh
Confidence 45667777888899999999999999999988766543 1222223333333333333466777899
Q ss_pred cccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 309 AEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 309 ~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
.|.+|++.|+.++|+......+|..++|.+.+++.+.
T Consensus 129 ~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 129 PELVGKENLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998876
No 215
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.85 E-value=6.5e-08 Score=88.67 Aligned_cols=137 Identities=15% Similarity=0.054 Sum_probs=96.4
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHH
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFY 292 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~ 292 (420)
.......|.+.++.|. ..+.+.......++..++.++.|+++||+|||+.+..+..+ .+...++...+.
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 96 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTAL 96 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4455677888888888 88889999999999999999999999999999998877654 111111111122
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc-chHHHHHHHHHHH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG-SAMVQWFFALISV 361 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~ 361 (420)
.+.......+.......|.+| ++|+++.++.+....+|..+++.+.+.+.+..+. ++..+...+++.+
T Consensus 97 ~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 97 IGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 222111223334456677776 5799999999999999999999999988877542 4555555554433
No 216
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.83 E-value=1.9e-08 Score=98.49 Aligned_cols=150 Identities=6% Similarity=-0.028 Sum_probs=106.1
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hh----------
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KS---------- 282 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~---------- 282 (420)
.....-.+.+-++.++ ..+.+.+.+.+.++..++.++.+++.||.+||+.+..+.++ .+
T Consensus 50 g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~ 129 (633)
T TIGR00805 50 GLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYST 129 (633)
T ss_pred HHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccc
Confidence 3344445555555588 78888899999999999999999999999999887766554 11
Q ss_pred ------------------------------------------HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhh
Q psy6665 283 ------------------------------------------LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIA 320 (420)
Q Consensus 283 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 320 (420)
+..+++.-++.+.......+...+++.|.+|++.|+..
T Consensus 130 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~ 209 (633)
T TIGR00805 130 TVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLY 209 (633)
T ss_pred cccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHH
Confidence 01111222233333333456667999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhcC---------------------cchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 321 QGLTFCLAHILMFFALQYYPWFKDSVG---------------------GSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 321 ~g~~~~~~~~~~~~~~~~~g~l~~~~g---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
.|+.+....+|..+++.+.+.+.+... .|+..|++.+++.++..+.. ++.|++
T Consensus 210 ~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l-~~~p~~ 283 (633)
T TIGR00805 210 IGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF-FFFPKA 283 (633)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH-HhCccc
Confidence 999999999999999999998876531 14455667676666665544 345543
No 217
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.79 E-value=3.6e-07 Score=84.90 Aligned_cols=161 Identities=16% Similarity=0.031 Sum_probs=106.7
Q ss_pred HHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHH--HHHHHHHHHHHHHHH-HHhhhccCchhhHhhhccc-------
Q psy6665 212 TVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLA--TVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSQIE------- 280 (420)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~--~~~~~~~~~~~~~~~-g~l~d~~g~~~~~~~~~~~------- 280 (420)
.....+.+...+.....+.|.++++.|. ..+.+.. .....+..++..++. ++..||+||||..++...+
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~ 85 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLA 85 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHH
Confidence 3334455555677788899999999998 7777775 355577787778777 4578999988875322211
Q ss_pred -------h-h-HHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchH
Q psy6665 281 -------K-S-LIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAM 351 (420)
Q Consensus 281 -------~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~ 351 (420)
. . .............+.....+....+..|..+++.++...+.......+|..+++...+++.++.| ++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g-w~~ 164 (390)
T TIGR02718 86 SLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG-QRP 164 (390)
T ss_pred HHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHH
Confidence 1 1 11111111111122222233444567777787877888888887778899999988889999999 899
Q ss_pred HHHHHHHHHHHHHHHhhhcccc
Q psy6665 352 VQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
.|++.+++.++..+..++..++
T Consensus 165 ~f~~~a~l~~~~~~~~~~~~~~ 186 (390)
T TIGR02718 165 AFLLVACVPLASLVCVLWLKDR 186 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 9999988887766665444443
No 218
>KOG2532|consensus
Probab=98.72 E-value=1.1e-07 Score=88.83 Aligned_cols=134 Identities=10% Similarity=0.123 Sum_probs=110.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHHHHHHHHHHHHHhhchhhHHHH
Q psy6665 240 RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIPVFCILFYVAISVIGMLSIPWT 306 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
+.+.+.+......+.+++.+.+|++.||+|-|+++..+.++ .+...++..-++.+.......|....
T Consensus 72 ~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 72 STEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence 56677888899999999999999999999999998888776 12223344444554444445677778
Q ss_pred HhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh-cCcchHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 307 MTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS-VGGSAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 307 ~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
+..+-.|+++|++..++.....++|.+++-++.|.+.+. .| |...|++.++++++..++.+.+..+.
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 889999999999999999999999999999999999999 78 99999999999999888776666543
No 219
>KOG2533|consensus
Probab=98.70 E-value=1.2e-07 Score=89.00 Aligned_cols=140 Identities=14% Similarity=0.095 Sum_probs=115.6
Q ss_pred hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhH
Q psy6665 236 DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSI 303 (420)
Q Consensus 236 ~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
+.++ ..+-+...+.+.++.+++.+.++.+.||++-.+.+....++ .+...++.+-++.+.+..+..|.
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~ 154 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPG 154 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchH
Confidence 3355 66778889999999999999999999999976666555544 34555666677777777777888
Q ss_pred HHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH------hcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 304 PWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD------SVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 304 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
...++...+.+++|+.-+|+.+....+|++++.++...+.+ ..| |++.|++-+++.++..+++++++|+...
T Consensus 155 ~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g-W~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 155 VVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG-WRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC-ceeehhHHHHHHHHHHheEEEEecCChh
Confidence 88999999999999999999999999999999999877643 344 8999999999999999999889887655
No 220
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.68 E-value=2.1e-07 Score=87.57 Aligned_cols=131 Identities=11% Similarity=0.035 Sum_probs=107.2
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcch--hHHHHhhHHHHHHHHHHHH--------h--HHHHHhhccccc
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRR--SLTMFSGLGMAVCMTTSGY--------Y--TQLIMTGQIEKS 67 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~--~~~~~~~r~~~~ 67 (420)
+|.+..+......+..+..++|+++ |++.||+|.| ++++.+++++.+..+...+ . .+.+.+.-
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a---- 387 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA---- 387 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH----
Confidence 3566677777777788889999999 9999999999 8998888888665555444 2 56666677
Q ss_pred cchhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcc
Q psy6665 68 LIPVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYIL 142 (420)
Q Consensus 68 ~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~ 142 (420)
++.|++.| ...+...++.+|+.|+++.+..+|++....-....+||++.+.+ +-|+.+....++.+
T Consensus 388 --------~~~G~~~G-~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~ 458 (477)
T PF11700_consen 388 --------VLIGLFMG-GIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFL 458 (477)
T ss_pred --------HHHHHHhh-hHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 99999999 77777999999999999999999999999999999999988877 46777766666555
Q ss_pred cc
Q psy6665 143 IP 144 (420)
Q Consensus 143 ~~ 144 (420)
+.
T Consensus 459 ~g 460 (477)
T PF11700_consen 459 IG 460 (477)
T ss_pred HH
Confidence 54
No 221
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.62 E-value=7.1e-07 Score=84.35 Aligned_cols=108 Identities=14% Similarity=0.162 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh---HHHHHhhccccccchhHHHHHHHHHHhh
Q psy6665 8 YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY---TQLIMTGQIEKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~~~r~~~~~~~~~~~~~l~G~~~~ 83 (420)
......+..++.+++.++ ++++||+|||+++..+.++.+++.+...+. .+.+.+.. ++.|++.+
T Consensus 259 ~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~~~ 326 (437)
T TIGR00792 259 FSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLI------------ILAGFGQN 326 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHH------------HHHHHHHH
Confidence 344556668888999999 999999999999999988887776665443 33444445 78888888
Q ss_pred cccchhhhhhhhhccC-------ccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 84 AMGPSPAIVYITEVAR-------PDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~-------~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
...+...++++|..+ ++++|.+.++.+....+|..+++.+.+.+
T Consensus 327 -~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 327 -FVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred -HHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666768889988865 45679999999999999999988887765
No 222
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.61 E-value=8.7e-07 Score=75.24 Aligned_cols=154 Identities=13% Similarity=0.216 Sum_probs=102.1
Q ss_pred HHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------
Q psy6665 215 FALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------- 280 (420)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------- 280 (420)
+.....+..|.+..|.|.+-++.|+ ..+...+.....++..+ +++.|.+.|++|++.++.++...
T Consensus 10 ~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 10 WVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred HHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444678899999999888899 77777777777788776 58889999999999988887776
Q ss_pred ---h-hHHHHHHHHHHHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHH
Q psy6665 281 ---K-SLIPVFCILFYVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWF 355 (420)
Q Consensus 281 ---~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~ 355 (420)
. .....+.+..+..+.+.++ .........+.|| ++||++.|+.-....+++.+-..+...+.+. + ....+.+
T Consensus 89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~-~~~fll~ 165 (250)
T PF06813_consen 89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-D-PSSFLLF 165 (250)
T ss_pred CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-C-hHHHHHH
Confidence 1 1222223333333333333 2333344557888 5799999999999999999887777666554 2 3444445
Q ss_pred HHHHHHHHHHHhhhccc
Q psy6665 356 FALISVISIVYVYIFLP 372 (420)
Q Consensus 356 ~~~~~~~~~~~~~~~~~ 372 (420)
.+....+..+....+++
T Consensus 166 la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 166 LAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHHHHHHHHHhhhee
Confidence 55544444444434443
No 223
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.61 E-value=3.5e-07 Score=81.62 Aligned_cols=131 Identities=13% Similarity=0.089 Sum_probs=107.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFY 77 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l 77 (420)
+|.+..+.........+..++|++. |+|.||+|-|+++..+.++..+.++...+. ...+.+.- .+
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~g------------ll 350 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILG------------LL 350 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHH------------HH
Confidence 3566666666667778888999999 999999999999999999999888877666 44455555 88
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcccc
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~~~ 144 (420)
.|...| ..+..+.+|.++..|+++-++.+|+++...-.+..++|.+.+.+ +-|.-+....++..+.
T Consensus 351 ~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iG 421 (438)
T COG2270 351 VGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIG 421 (438)
T ss_pred HHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 999999 77777999999999999999999999999999999999888776 4666665555554444
No 224
>KOG2504|consensus
Probab=98.59 E-value=6.4e-07 Score=84.89 Aligned_cols=149 Identities=17% Similarity=0.190 Sum_probs=108.9
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
.+.+..+.+.+.++.+. ..+..+...+......+..++.+.+.||+|.|.+.+.+.++ .+.+.+.+..
T Consensus 62 ~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~ 141 (509)
T KOG2504|consen 62 INSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTF 141 (509)
T ss_pred hheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 34444555666666565 66688888888888999999999999999999999888877 2333333333
Q ss_pred HHHHHHhhchhhHH-HHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhh
Q psy6665 291 FYVAISVIGMLSIP-WTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYI 369 (420)
Q Consensus 291 ~~~~~~~~~~~~~~-~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 369 (420)
-...+.+.++...+ ...+..+| +++|+.++|+......+|.++-|.+..++.+..| ++..+++++.+.+-.++....
T Consensus 142 gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~~~ 219 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAGAL 219 (509)
T ss_pred HHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHH
Confidence 33333333332222 24445554 4779999999999999999999999999999999 999999999888777776655
Q ss_pred cccc
Q psy6665 370 FLPE 373 (420)
Q Consensus 370 ~~~~ 373 (420)
..|.
T Consensus 220 ~rp~ 223 (509)
T KOG2504|consen 220 LRPL 223 (509)
T ss_pred cCCC
Confidence 5553
No 225
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.55 E-value=6.3e-07 Score=81.47 Aligned_cols=146 Identities=8% Similarity=0.100 Sum_probs=88.8
Q ss_pred hhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----hhHH-----HHH---
Q psy6665 223 IYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----KSLI-----PVF--- 287 (420)
Q Consensus 223 ~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----~~~~-----~~~--- 287 (420)
......+.|..+++ .|+ +++.+.+.+...+..++.+++.|.++||+|.||-++..... .+.. +++
T Consensus 23 ~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n 102 (412)
T PF01306_consen 23 WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSN 102 (412)
T ss_dssp HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777888876 599 99999999999999999999999999999966654433221 1111 110
Q ss_pred -HHHHHHH--HHhhch---hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHH
Q psy6665 288 -CILFYVA--ISVIGM---LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISV 361 (420)
Q Consensus 288 -~~~~~~~--~~~~~~---~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 361 (420)
......+ ..+..+ .|+.-+++.+. .+..+.-+|=....+.+|.+++..+.|.+.+.. ....+++..+..+
T Consensus 103 ~~lg~iig~i~l~~~f~~~~~~~Ea~~er~--sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~--p~~~fwi~s~~~~ 178 (412)
T PF01306_consen 103 FWLGAIIGGIYLGLVFNAGVPLSEAYAERV--SRRNGFEYGRARMWGSIGFAIASLLAGILFNIN--PNIIFWIASAAAI 178 (412)
T ss_dssp -HHHHHHTTTTTTTTTTTHHHHHHHHHHHH--HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccchHHHHHHHHH--HHHhcCCcchHHHHhhHHHHHHHHHhheeeeeC--ccHHHHHHHHHHH
Confidence 0001111 111112 23333333322 133466688888999999999999999999853 4677776665555
Q ss_pred HHHHHhhhccc
Q psy6665 362 ISIVYVYIFLP 372 (420)
Q Consensus 362 ~~~~~~~~~~~ 372 (420)
+..++.++..|
T Consensus 179 il~lll~~~~~ 189 (412)
T PF01306_consen 179 ILLLLLLLLKP 189 (412)
T ss_dssp HHHHHHHSS--
T ss_pred HHHHHHHHcCC
Confidence 55544443433
No 226
>KOG0254|consensus
Probab=98.54 E-value=1.6e-06 Score=83.42 Aligned_cols=129 Identities=21% Similarity=0.221 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccC
Q psy6665 244 YLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIF 312 (420)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (420)
++..+...++..++.++.|+++|++|||+.+..+.+. .++..+...-++.+....+...+...+.+|+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia 171 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC
Confidence 6888899999999999999999999999998888776 22233333333333333333445568999999
Q ss_pred ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc--CcchHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 313 PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV--GGSAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 313 p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
|++.||...+..+....+|..++ .+.+...++. + |+..+.+..+.+++..+. .++.||+.
T Consensus 172 p~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~-Wr~~~~~~~i~~~~~~~~-~~~~pesp 233 (513)
T KOG0254|consen 172 PAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAG-WRIPLGLALIPAVILALG-MLFLPESP 233 (513)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCcc-HHHHHHHHHHHHHHHHHH-HHhCCCCh
Confidence 99999999999999999777777 5556655543 5 777777777777776666 67788764
No 227
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.49 E-value=2e-09 Score=102.18 Aligned_cols=131 Identities=19% Similarity=0.189 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------h---hHHHHHHHHHHHHHHhhchhhHHHHHh
Q psy6665 243 VYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------K---SLIPVFCILFYVAISVIGMLSIPWTMT 308 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
.........++.++|+++.|+++||+|||+.+..+..+ . ++..+...-++.+....+..+....++
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~ 127 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYI 127 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45677888899999999999999999999998887776 2 333343333444443334456677999
Q ss_pred cccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc---chHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 309 AEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG---SAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 309 ~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
.|..|+++|+...++.+....+|..++..+.-.+ ....+ |+..+.+.++.+++. ++...+.||+.
T Consensus 128 ~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~l~~-~~~~~~~pESP 195 (451)
T PF00083_consen 128 SEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV-SYYSDNWGWRILLIFGAIPSLLV-LLLRFFLPESP 195 (451)
T ss_pred cccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc-ccccccccccc
Confidence 9999999999999999998888887776665333 22221 344444444444333 33446778864
No 228
>PRK09669 putative symporter YagG; Provisional
Probab=98.48 E-value=1.6e-06 Score=82.04 Aligned_cols=150 Identities=16% Similarity=0.147 Sum_probs=94.4
Q ss_pred hhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc----cCchhhHhh-hccc----------hh----
Q psy6665 224 YITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT----YGRRSLTMF-SQIE----------KS---- 282 (420)
Q Consensus 224 ~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~-~~~~----------~~---- 282 (420)
..+..|++.|+.+. |+ +...+.......+...+..++.|.++|| +||||..+. +... .+
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~ 105 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGA 105 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 44566777777776 88 8888899999999999999999999999 667555443 2221 10
Q ss_pred H---HHHH-HHHHHHHHHhhchhhHHHHHhcccC-ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC------cchH
Q psy6665 283 L---IPVF-CILFYVAISVIGMLSIPWTMTAEIF-PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG------GSAM 351 (420)
Q Consensus 283 ~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g------~~~~ 351 (420)
. .... ...++..++. .......++.+|+. ++++|.+..+.......+|+.+++.+...+....+ ++..
T Consensus 106 ~~~~~~~~~~~~l~~~~~t-~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~ 184 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYT-AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFY 184 (444)
T ss_pred chHHHHHHHHHHHHHHHHH-hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH
Confidence 0 1111 1111222222 22323347888876 55779988898888888888888776655554443 1344
Q ss_pred HHHHHHHHHHHHHHHhhhccccC
Q psy6665 352 VQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
.+.++++++.+..+++++..+|+
T Consensus 185 ~~~i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 185 AMMVMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEe
Confidence 55556666666555555555554
No 229
>PRK09848 glucuronide transporter; Provisional
Probab=98.47 E-value=2.7e-06 Score=80.58 Aligned_cols=101 Identities=9% Similarity=0.020 Sum_probs=79.3
Q ss_pred HHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----HHHHHhhccccccchhHHHHHHHHHHhhcccchh
Q psy6665 15 GVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSP 89 (420)
Q Consensus 15 ~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~ 89 (420)
..++.+++.++ +++.||+|+|+++.++.++..++.+...+. .+.+++.. ++.|+|.+ ...+.
T Consensus 273 ~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~------------~l~g~G~~-~~~~~ 339 (448)
T PRK09848 273 NLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL------------AIASIGQG-VTMTV 339 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH------------HHHHHHHH-HHHHH
Confidence 35667788888 999999999999999998888877666543 34444455 78899998 76777
Q ss_pred hhhhhhhccCcc-------chhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 90 AIVYITEVARPD-------LRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 90 ~~~~i~e~~~~~-------~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
..++..|..|.+ ++|...++.+....+|..+++.+.+.+
T Consensus 340 ~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~ 385 (448)
T PRK09848 340 MWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFI 385 (448)
T ss_pred HHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999988754 358889999999989888888776554
No 230
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.45 E-value=1.7e-05 Score=67.48 Aligned_cols=122 Identities=16% Similarity=0.142 Sum_probs=88.6
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHhhHHHHHHHHHHHHhHHHHHhhccc-cccchhHHHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQIE-KSLIPVFCILFYVA 79 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~l~G 79 (420)
+|.|.++.........+|..+|-+.|.+.|++|.|.++++|.+...+|....... +-.|.+ ...+.+.+..++.|
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~----~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLA----VSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH----HhCccCccchHHHHHHHHHHc
Confidence 3677888888888889999887444999999999999999999999988776554 111111 11111212236666
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
.+.+ ....++.....+.|| ++||++.++.-...+++..+-..+...+
T Consensus 108 ~s~~-~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 108 NSSC-WFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred ccHH-HhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 7766 555556666778887 5799999999999999888777666555
No 231
>KOG0637|consensus
Probab=98.44 E-value=3e-07 Score=82.55 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=77.6
Q ss_pred HHHHHHH-HHHHH----hhcchhHHHH-hhHHHHHHHHHHHHh--HHHHHhhcccc---ccchhH--HHHHHHHHHhhcc
Q psy6665 19 MVFGLLT-SQLLR----TYGRRSLTMF-SGLGMAVCMTTSGYY--TQLIMTGQIEK---SLIPVF--CILFYVAISVIAM 85 (420)
Q Consensus 19 ~~~~~~~-g~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~--~~~~~~~r~~~---~~~~~~--~~~~l~G~~~~~~ 85 (420)
..+-++. |..+| ||||||.++. +....+++.++.+++ +..++.-.... -++.++ .=+-+.-+..- .
T Consensus 80 G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n-~ 158 (498)
T KOG0637|consen 80 GLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANN-T 158 (498)
T ss_pred cceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhh-h
Confidence 3444667 99999 5998776665 666677777777777 44444433111 111111 11344556665 4
Q ss_pred cchhhhhhhhhccCccchhh-hHhHHHHHHHHHHHHHHHHhhhhhhHH
Q psy6665 86 GPSPAIVYITEVARPDLRGA-LICIGPSITSLGMVIVYALGAVLHWRT 132 (420)
Q Consensus 86 ~~~~~~~~i~e~~~~~~r~~-~~~~~~~~~~lG~~~~~~~~~~~~wr~ 132 (420)
...++-+++.|...++++.+ +.++......+|+.+|..++.+.+|+-
T Consensus 159 ~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~ 206 (498)
T KOG0637|consen 159 LQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYK 206 (498)
T ss_pred hhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceE
Confidence 45559999999998887777 999999999999999999998876654
No 232
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.44 E-value=1.1e-06 Score=80.37 Aligned_cols=152 Identities=13% Similarity=0.013 Sum_probs=106.7
Q ss_pred HHhcchhhHHHhHHHHHHhh-C----C-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-CchhhHhhhccc----------
Q psy6665 218 QQLAGIYITIFYAVQFLEDM-G----S-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-GRRSLTMFSQIE---------- 280 (420)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~-g----~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~---------- 280 (420)
..-.++|.+...+..|+... + + ++++......+...--...+++|+++||+ |+|+++..+.++
T Consensus 32 WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~ 111 (498)
T COG3104 32 WERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAI 111 (498)
T ss_pred HHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhc
Confidence 34445666666666666543 4 7 56666666666666667788999999996 999998888776
Q ss_pred h---hHHHHHHHHHHHHHHhhchhhHHHHHhcccCChh--hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHH
Q psy6665 281 K---SLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLE--IRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWF 355 (420)
Q Consensus 281 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~ 355 (420)
. ....+...+.+.......+=+....+..|++|++ .|-.++++.....++|+.++|.+.+++.++.| ++..|..
T Consensus 112 ~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g-~~~gF~~ 190 (498)
T COG3104 112 SSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG-WHVGFGL 190 (498)
T ss_pred cccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC-HHHHHHH
Confidence 2 1122222233333333334455558888998754 36778888899999999999999999999999 9999988
Q ss_pred HHHHHHHHHHHhhhc
Q psy6665 356 FALISVISIVYVYIF 370 (420)
Q Consensus 356 ~~~~~~~~~~~~~~~ 370 (420)
.++-..++.+..++.
T Consensus 191 aavGm~~gl~~f~~~ 205 (498)
T COG3104 191 AAVGMIIGLVIFLLG 205 (498)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888887777765543
No 233
>KOG2816|consensus
Probab=98.43 E-value=6.1e-06 Score=77.05 Aligned_cols=127 Identities=19% Similarity=0.274 Sum_probs=99.9
Q ss_pred HHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhh
Q psy6665 251 GVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIA 320 (420)
Q Consensus 251 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~ 320 (420)
++..++.++..|.++|++|||..+...... ..++..+ .. ...+..........++.+|....+.|...
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~-~~-~l~g~~~~~~s~~~a~vadis~~~~R~~~ 149 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL-LL-GLSGGFSAIFSVGFAYVADISSEEERSSS 149 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh-hc-ccccchhhhhhhhhhheeeccchhHHHHH
Confidence 677888899999999999999888877666 1111111 11 11111122345556899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCCCChH
Q psy6665 321 QGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHGRTLL 380 (420)
Q Consensus 321 ~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (420)
.|+.+.....+..++|.+.+.+.+..| ....+.+.++..++..+...+++||+..++.+
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLG-IALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 999999999999999999999999988 89999999999999999998999998766543
No 234
>KOG0253|consensus
Probab=98.39 E-value=3e-06 Score=74.14 Aligned_cols=136 Identities=14% Similarity=0.077 Sum_probs=95.2
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhchhhHHHH
Q psy6665 238 GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGMLSIPWT 306 (420)
Q Consensus 238 g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
|. ..+...+......+..+++..+|.++|++|||+........ .+....++..-...+++.+..|...+
T Consensus 109 ~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg~pv~~~ 188 (528)
T KOG0253|consen 109 GPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGGLPVDSA 188 (528)
T ss_pred chhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCCccHhHH
Confidence 66 66777778888899999999999999999999887776665 22222333333333444444677778
Q ss_pred HhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 307 MTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 307 ~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
+-.|..|..+|..-+-+. +...+|..+...+.=.+..+.| +++.+.... .....+...++++||..+
T Consensus 189 ~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g-wr~~l~~~~-~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 189 IYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG-WRYLLFTSS-TPLMFAARFLVWVYESPR 255 (528)
T ss_pred HHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHH-hHHHHHHHHHhhcccCcc
Confidence 888999999888877666 7788888888888766778888 555544444 443333444467888654
No 235
>PRK11462 putative transporter; Provisional
Probab=98.37 E-value=1.8e-05 Score=75.09 Aligned_cols=151 Identities=11% Similarity=0.049 Sum_probs=95.2
Q ss_pred hhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhc----cCchhhHhhhcc-c-----------h---
Q psy6665 223 IYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRT----YGRRSLTMFSQI-E-----------K--- 281 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~-~-----------~--- 281 (420)
......|+..|+.+. |+ +...+.+..+.-+...+.-++.|.++|| +||||..+.... . .
T Consensus 25 ~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s 104 (460)
T PRK11462 25 FDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLS 104 (460)
T ss_pred HHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCC
Confidence 344566777777776 88 7888888899999999999999999997 577765544332 2 1
Q ss_pred hH--HHHH--HHHHHHHHHhhchhhHHHHHhcccCC-hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc------ch
Q psy6665 282 SL--IPVF--CILFYVAISVIGMLSIPWTMTAEIFP-LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG------SA 350 (420)
Q Consensus 282 ~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~------~~ 350 (420)
.. ..+. ...++..++.. ......++..|+.+ +++|++..++-.....+|..+++.+...+.+..|+ +.
T Consensus 105 ~~~~~~y~~~~~~~~~~~~t~-~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~ 183 (460)
T PRK11462 105 MNGKMIYAAITYTLLTLLYTV-VNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQ 183 (460)
T ss_pred cchHHHHHHHHHHHHHHHHHH-HhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 00 1111 11111222221 12222377788876 78899999999999999988888877666655441 33
Q ss_pred HHHHHHHHHHHHHHHHhhhccccC
Q psy6665 351 MVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
....+++++.++...+++...+|+
T Consensus 184 ~~~~i~~ii~~i~~~i~~~~~kE~ 207 (460)
T PRK11462 184 GGIAVLSVVAFMMLAFCFFTTKER 207 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcceec
Confidence 344455555555555554444554
No 236
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.37 E-value=9.8e-06 Score=77.31 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=91.6
Q ss_pred hhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhh----ccCchhhHhh-hccc---------h----h
Q psy6665 223 IYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLR----TYGRRSLTMF-SQIE---------K----S 282 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~-~~~~---------~----~ 282 (420)
...+..|++.|+.+. |+ +...+.......+...+..++.|.++| |+|||+..+. +... . +
T Consensus 22 ~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~ 101 (473)
T PRK10429 22 IGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFE 101 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCC
Confidence 445667778888777 88 888888999999999999999999999 5588655443 3222 0 0
Q ss_pred -HHHHHHHH----HHHHHHhhchhhHHHHHhcccC-ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc------ch
Q psy6665 283 -LIPVFCIL----FYVAISVIGMLSIPWTMTAEIF-PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG------SA 350 (420)
Q Consensus 283 -~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~------~~ 350 (420)
........ ++..++.. ......++..|+. ++++|.+..+.-.....+++.+.+.+...+.+..|+ +.
T Consensus 102 ~~~~~~~~~~~~~l~~~~~t~-~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~ 180 (473)
T PRK10429 102 GTAQYVFVCVTYILWGMTYTI-MDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQ 180 (473)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-HcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHH
Confidence 00011111 11111111 1223347888987 588899999887777787777666655544443331 23
Q ss_pred HHHHHHHHHHHHHHHHhhhccccC
Q psy6665 351 MVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
....+++++..+..+++++..||+
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 181 MFTLVLIAFFIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcCceec
Confidence 334445555555555555445554
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.36 E-value=4.8e-06 Score=74.46 Aligned_cols=123 Identities=10% Similarity=-0.039 Sum_probs=89.1
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
|.+.++.....+.+..+.++|.+. +++.||+|+|+++.++.++..++.++.... .......- ++.|
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~~~------------~l~g 241 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMWFV------------LALG 241 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH------------HHHH
Confidence 456677788899999999999999 999999999998888877777665444333 11112233 6889
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhh
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLA 139 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~ 139 (420)
++.+ ...+...+...+..|++ .+.+.++. ....+|..+.|.+.+.+ |.+..|++..+
T Consensus 242 ~~~s-~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 242 LFNS-IMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHH-HHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 9999 77776788888888754 45666775 45668888888766665 66777665443
No 238
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.34 E-value=2.2e-06 Score=80.73 Aligned_cols=148 Identities=15% Similarity=0.185 Sum_probs=99.4
Q ss_pred hHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhh----ccCchhhHhhhccc-----------h-h--H-
Q psy6665 225 ITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLR----TYGRRSLTMFSQIE-----------K-S--L- 283 (420)
Q Consensus 225 ~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~g~~~~~~~~~~~-----------~-~--~- 283 (420)
....|.+.|+.+. |+ +...+.......+...+..++.|.++| |+||||..+..... . + +
T Consensus 19 ~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~ 98 (428)
T PF13347_consen 19 LLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLS 98 (428)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhh
Confidence 3445666777666 88 778888888888999999999999999 78988765543322 1 1 0
Q ss_pred --HH----HHHHHHHHHHHhhchhhHHHHHhcccCC-hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC------cch
Q psy6665 284 --IP----VFCILFYVAISVIGMLSIPWTMTAEIFP-LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG------GSA 350 (420)
Q Consensus 284 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g------~~~ 350 (420)
.. .+...++..++.. ......++..|+.+ +++|.+..+.......+|..+...+.+.+.+..| ++.
T Consensus 99 ~~~~~~~~~~~~~l~~~~~t~-~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~ 177 (428)
T PF13347_consen 99 FTAKLVWLFVFYILFDIAYTF-VQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYR 177 (428)
T ss_pred hhhHHHHHHHHHHHHHHhhhh-ccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHH
Confidence 01 1111111111211 12233478889987 5789999999999999988877777777776555 255
Q ss_pred HHHHHHHHHHHHHHHHhhhcccc
Q psy6665 351 MVQWFFALISVISIVYVYIFLPE 373 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~ 373 (420)
....+.+++.++..++..+..||
T Consensus 178 ~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 178 WMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHHHHhhhhhheeee
Confidence 56666777777777777677777
No 239
>KOG3762|consensus
Probab=98.33 E-value=2.2e-06 Score=78.65 Aligned_cols=144 Identities=14% Similarity=0.196 Sum_probs=109.4
Q ss_pred hhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hhHHHHHHHH
Q psy6665 223 IYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KSLIPVFCIL 290 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~~~~~~~~~ 290 (420)
...+.+++--.+++.+- +.-.+........+.++.-++.+++.+|+|+-+++..++.+ .+++.++.+=
T Consensus 387 ~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPie 466 (618)
T KOG3762|consen 387 VGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIE 466 (618)
T ss_pred HHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHH
Confidence 44455566556677644 66666777777888999999999999999999998888766 4444444444
Q ss_pred HHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHH-HHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 291 FYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAH-ILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~-~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
++.+......+....+|++...|++.+.++.++...... +|-.+|+++.|.+.+.+| ....|.++++.+++.++..
T Consensus 467 ilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 467 ILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIACLVTLALF 543 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHHHHHHHHH
Confidence 444444444455556999999999999999999887754 677799999999999999 8888888888887776654
No 240
>KOG4686|consensus
Probab=98.31 E-value=2.2e-06 Score=72.24 Aligned_cols=115 Identities=10% Similarity=-0.000 Sum_probs=85.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHH-HHHHHHHhHHHHHhhccccccchhHHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAV-CMTTSGYYTQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
||.|......+.+.-..-.++.+++ |.++||+||+-..+.+..+..+ +-....+.++.=..+. .+.
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m------------~~l 362 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLSPYTSM------------TFL 362 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhccHHHHH------------HHH
Confidence 3555555555555544445566677 9999999999887775554443 3344444444445566 788
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
|+... ......+..++-..|+++.|++.+..++..++|..+.|++++.+
T Consensus 363 GLsys-llAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 363 GLSYS-LLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred hhhHH-HHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 88888 66555788899999999999999999999999999999999987
No 241
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.31 E-value=0.00025 Score=69.54 Aligned_cols=138 Identities=7% Similarity=-0.047 Sum_probs=91.6
Q ss_pred CccchHHHHHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHH
Q psy6665 3 SRMNVYLATVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 3 ~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G 79 (420)
.+.+.....+..+..-.-+.+++ |.++|+ +||++.+.++.++..++.++.++. ..... + ............+..
T Consensus 20 ~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~--~-~~~~~~~l~gLaLia 96 (654)
T TIGR00926 20 FSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG--H-PLHDLLDLLGLALIA 96 (654)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc--c-chHHHHHHHHHHHHH
Confidence 33444444444444334444555 999996 999999999999999998877664 11000 0 000011112236777
Q ss_pred HHhhcccchhhhhhhhhccCcc---chhhhHhHHHHHHHHHHHHHHHHhhhh-----------hhHHHHHhHhhhcccc
Q psy6665 80 ISVIAMGPSPAIVYITEVARPD---LRGALICIGPSITSLGMVIVYALGAVL-----------HWRTVAWLSLAYILIP 144 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~---~r~~~~~~~~~~~~lG~~~~~~~~~~~-----------~wr~~f~~~~~~~~~~ 144 (420)
+|.| ..-+...+...|-++++ +|.....++..+.++|.++++.+...+ +|...|.+.++..++.
T Consensus 97 ~G~G-giKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 97 LGTG-GIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred hhcc-ccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 8888 66666888999988754 366778888888899999888776655 3888888887777665
No 242
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.31 E-value=2.5e-05 Score=69.62 Aligned_cols=141 Identities=11% Similarity=0.046 Sum_probs=101.0
Q ss_pred HHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------hhHHHHHHHHHH
Q psy6665 227 IFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------KSLIPVFCILFY 292 (420)
Q Consensus 227 ~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~~~~~~~~~~~~ 292 (420)
-...|.+.+..++ ..+++........+..+.++..+++.+|+|.|+.++.+..+ .......+..++
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 3344555444477 78899999999999999999999999999999999888877 112222233333
Q ss_pred HHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh------------------cCcchHHH
Q psy6665 293 VAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS------------------VGGSAMVQ 353 (420)
Q Consensus 293 ~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~------------------~g~~~~~~ 353 (420)
..+.+.+. .+....++..+.|++..+.-+.+.+.+..+|.+++|.+.+.+..+ ......++
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 33333333 444558888898888888889999999999999999999988873 11244566
Q ss_pred HHHHHHHHHHHHHh
Q psy6665 354 WFFALISVISIVYV 367 (420)
Q Consensus 354 ~~~~~~~~~~~~~~ 367 (420)
...+...++..+..
T Consensus 193 l~~~~~lvll~v~~ 206 (422)
T COG0738 193 LILAGLLVLLAVLI 206 (422)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666665555544
No 243
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.28 E-value=2e-05 Score=61.80 Aligned_cols=106 Identities=10% Similarity=0.078 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHHHHhhccc
Q psy6665 9 LATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVAISVIAMG 86 (420)
Q Consensus 9 ~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~ 86 (420)
....++......+++++ +.+.+++|.|+.+++|.+...+-....... .+.++.+- ++.|++.+ ..
T Consensus 40 ~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s------------~l~G~~~a-~l 106 (156)
T PF05978_consen 40 YYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPAS------------ALLGFGAA-LL 106 (156)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH------------HHHhhhhH-Hh
Confidence 44555666777888888 999999999999999999998766655444 77778888 99999999 88
Q ss_pred chhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhh
Q psy6665 87 PSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAV 127 (420)
Q Consensus 87 ~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~ 127 (420)
..+...++.+..++++|++-.++.......+.++|.++...
T Consensus 107 W~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 107 WTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFF 147 (156)
T ss_pred hHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88788999999999999999999888888888887766543
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.28 E-value=0.0025 Score=59.80 Aligned_cols=121 Identities=7% Similarity=-0.087 Sum_probs=85.8
Q ss_pred hHHHHHHHHHHHHHHH-HHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-H--HHHH----------hhc-cc-----
Q psy6665 7 VYLATVLVGVVRMVFG-LLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-T--QLIM----------TGQ-IE----- 65 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~-~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~--~~~~----------~~r-~~----- 65 (420)
......+...+-..+. .++ +++++|++|++++-.....+.+...++++. + ...+ ..+ ..
T Consensus 44 ~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i 123 (472)
T TIGR00769 44 IIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFI 123 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHH
Confidence 3444555555555555 666 999999999999998888887777776665 1 1110 000 00
Q ss_pred --cccchhHHHHHHHHHHhhcccch-hhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 66 --KSLIPVFCILFYVAISVIAMGPS-PAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 66 --~~~~~~~~~~~l~G~~~~~~~~~-~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
.+.+...++|+...+... .... .-+.+++|.++.+|-.|..++.+.+.++|.++++.+..++
T Consensus 124 ~~~~~W~~~~FYv~~elw~~-~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 124 AILRIWSFALFYVMAELWGS-VVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHhhhhHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012233356777778777 4443 7899999999999999999999999999999999887765
No 245
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.28 E-value=9.8e-06 Score=72.32 Aligned_cols=124 Identities=18% Similarity=0.157 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh----HHHHHhhccccccchhHHHHHHHHHH
Q psy6665 7 VYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY----TQLIMTGQIEKSLIPVFCILFYVAIS 81 (420)
Q Consensus 7 ~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~~~r~~~~~~~~~~~~~l~G~~ 81 (420)
......+.+.++..++.++ |.++||+|||+.+..+.....++.+.+.+. .+.+++.| +.+|++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~g~~ 107 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILR------------LLQGLG 107 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHH------------HHHHhh
Confidence 4567778888899999888 999999999988888887655555555554 46777888 889999
Q ss_pred hhcccchhhhhhhhhccCc-cchhhhHhHHHH-HHHHHHHHHHHHhhhh------hhHHHHHhHhhhccc
Q psy6665 82 VIAMGPSPAIVYITEVARP-DLRGALICIGPS-ITSLGMVIVYALGAVL------HWRTVAWLSLAYILI 143 (420)
Q Consensus 82 ~~~~~~~~~~~~i~e~~~~-~~r~~~~~~~~~-~~~lG~~~~~~~~~~~------~wr~~f~~~~~~~~~ 143 (420)
.+ ...+...+++.|+.|+ ++|+...+.... ...+|..+++.++..+ +||..|.........
T Consensus 108 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 108 GG-GLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred hH-HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99 7777799999999987 678999998888 5777888887666554 688866666655543
No 246
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.23 E-value=0.00012 Score=64.78 Aligned_cols=145 Identities=17% Similarity=0.112 Sum_probs=90.0
Q ss_pred HHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhchh
Q psy6665 233 FLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGML 301 (420)
Q Consensus 233 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~ 301 (420)
.+++.|+ ..+....+........+...+.|.++||+|||+..+...++ +....+++.-++.+....-..
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 3355588 78888888888899999999999999999999887766665 222223222222222111112
Q ss_pred hHHHH-Hhccc----CChhhhhhhHHHHHHH-HHHHHHHHHHHhHHHHHhcCc-chHHHHHHHHHHHHHHHHhhhccccC
Q psy6665 302 SIPWT-MTAEI----FPLEIRGIAQGLTFCL-AHILMFFALQYYPWFKDSVGG-SAMVQWFFALISVISIVYVYIFLPET 374 (420)
Q Consensus 302 ~~~~~-~~~~~----~p~~~r~~~~g~~~~~-~~~~~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (420)
...-+ ++.|. +|++..+..++...+. +.+..+.+..+...+.+..|. ...+|.....+..++.+++....+|.
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence 22112 23333 5666666666655533 334455555555666776651 46788888888888777776666776
Q ss_pred CCC
Q psy6665 375 HGR 377 (420)
Q Consensus 375 ~~~ 377 (420)
.+.
T Consensus 220 yg~ 222 (354)
T PF05631_consen 220 YGD 222 (354)
T ss_pred CCC
Confidence 543
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.21 E-value=2.8e-05 Score=70.50 Aligned_cols=109 Identities=12% Similarity=-0.013 Sum_probs=69.3
Q ss_pred HHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccchhhhh
Q psy6665 16 VVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIV 92 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 92 (420)
.+-..+.-+. .++.+|..-+.=.....+++.++.++.+++ .+.-+++- ++.+++.| ......-.
T Consensus 69 i~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv------------~las~ssg-~GE~tfL~ 135 (402)
T PF02487_consen 69 ILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGV------------VLASLSSG-LGEVTFLS 135 (402)
T ss_pred HHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHH------------HHHhhhhh-hhHHHHHH
Confidence 3444455566 777888765444555666777788888876 66666777 88888888 77774444
Q ss_pred hhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh-----hhHHHHHhHhhhcc
Q psy6665 93 YITEVARPDLRGALICIGPSITSLGMVIVYALGAVL-----HWRTVAWLSLAYIL 142 (420)
Q Consensus 93 ~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~-----~wr~~f~~~~~~~~ 142 (420)
.+..+++ ...+-+.++.+.+.++|+..-..+ +-|..++....+.+
T Consensus 136 -lt~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~ 185 (402)
T PF02487_consen 136 -LTHFYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPA 185 (402)
T ss_pred -HHHhcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 4556653 346777777777777776543333 34666665555443
No 248
>KOG2325|consensus
Probab=98.17 E-value=1.1e-05 Score=74.50 Aligned_cols=170 Identities=13% Similarity=0.107 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHhcchhhHHHhHHHHHHhh--CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhhHhhhccc---
Q psy6665 208 LLVITVLFALQQLAGIYITIFYAVQFLEDM--GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGR-RSLTMFSQIE--- 280 (420)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~--- 280 (420)
.++......+.....+.....-.-.|+++. +- .+-.++......++.++++++.|....|.++ |+.++.+.++
T Consensus 35 si~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~ 114 (488)
T KOG2325|consen 35 SIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAII 114 (488)
T ss_pred hHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHH
Confidence 333343333333333333334444555553 44 5667788888999999999999999999885 5555555554
Q ss_pred ------------hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh---
Q psy6665 281 ------------KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS--- 345 (420)
Q Consensus 281 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~--- 345 (420)
+.+..+++..-+..+.+.+.....-.|+++..-.+.|.++++..+....+|..+||.+...+...
T Consensus 115 g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~ 194 (488)
T KOG2325|consen 115 GNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEK 194 (488)
T ss_pred HHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCC
Confidence 22333333333444444455556669999977777888888888887778888887776544321
Q ss_pred ---------cCcchHHHHHHHHHHHHHHHHhhhccccCCCC
Q psy6665 346 ---------VGGSAMVQWFFALISVISIVYVYIFLPETHGR 377 (420)
Q Consensus 346 ---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (420)
++.+..+-++.+.+.++.+++..++.+|....
T Consensus 195 G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 195 GFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred ceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 11255677888888888888888888775443
No 249
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.16 E-value=2.2e-05 Score=72.54 Aligned_cols=124 Identities=20% Similarity=0.292 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh---HHH----HHhhccccccchhHHHHHHHH
Q psy6665 8 YLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY---TQL----IMTGQIEKSLIPVFCILFYVA 79 (420)
Q Consensus 8 ~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~----~~~~r~~~~~~~~~~~~~l~G 79 (420)
.....++..++-++.... +++..|+|.|+++.++.+.+++=..+.+.. .+. .+... .+.|
T Consensus 245 ~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q------------~lhG 312 (400)
T PF03825_consen 245 IGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQ------------LLHG 312 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH------------hhhh
Confidence 344455666777777777 999999999999999999988877776654 222 22334 5799
Q ss_pred HHhhcccchhhhhhhhhccCccchhhhHhHHHHH-HHHHHHHHHHHhhhh----------hhHHHHHhHhhhcccc
Q psy6665 80 ISVIAMGPSPAIVYITEVARPDLRGALICIGPSI-TSLGMVIVYALGAVL----------HWRTVAWLSLAYILIP 144 (420)
Q Consensus 80 ~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~-~~lG~~~~~~~~~~~----------~wr~~f~~~~~~~~~~ 144 (420)
+..+ .....+..|+.+..|++.|+++.++++.. .++|..+|..+++.+ .|...+.+.+++.++.
T Consensus 313 ~tf~-~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~ 387 (400)
T PF03825_consen 313 LTFG-LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVI 387 (400)
T ss_pred HHHH-HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHH
Confidence 9999 88888999999999999999999998764 678999999888887 3555565565554443
No 250
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.14 E-value=0.00019 Score=63.15 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=111.0
Q ss_pred chhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------hhHHHHHHHHH
Q psy6665 222 GIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------KSLIPVFCILF 291 (420)
Q Consensus 222 ~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------~~~~~~~~~~~ 291 (420)
....+.-.++.+-++.|. ...++..+.+..+...+.+++..++.+|+|.++.+..++++ ......+....
T Consensus 27 ~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt 106 (395)
T COG2807 27 AITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGT 106 (395)
T ss_pred hhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 345555666777777788 88889999999999999999999999999999998888776 11122222222
Q ss_pred HHHHHhhch-hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 292 YVAISVIGM-LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 292 ~~~~~~~~~-~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
...+.+.+. +......+.+.||++ -+..+|++.....+++++++.+...+.++.++|+..+.+.+..++++.++.+
T Consensus 107 ~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 333333333 444557888899955 6999999999999999999999999999885588888888888888876543
No 251
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.13 E-value=7.7e-05 Score=70.91 Aligned_cols=161 Identities=11% Similarity=0.029 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhcchhhHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC-----chhhHhhhccc--
Q psy6665 210 VITVLFALQQLAGIYITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG-----RRSLTMFSQIE-- 280 (420)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~-- 280 (420)
.......+.+... .......+.++.+ .|+ +.+.+.......+...+-. +.|.++||++ ||+.+..+.++
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHHH
Confidence 3333334444444 5555556666665 488 6666666676666666644 4999999996 55544433322
Q ss_pred ----------hhHHHHHH-HHHHHHHHhhchhhHHHHHhcccCChhhhhhh---HHHHHHHHHHHHHHHHHHhHHHHHhc
Q psy6665 281 ----------KSLIPVFC-ILFYVAISVIGMLSIPWTMTAEIFPLEIRGIA---QGLTFCLAHILMFFALQYYPWFKDSV 346 (420)
Q Consensus 281 ----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~---~g~~~~~~~~~~~~~~~~~g~l~~~~ 346 (420)
.+...... ..+...+.....-...-++..|..+ +.++.. .++......+|..+++.+.|.+.+..
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~ 185 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT 185 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11112222 2222222222223444588889888 444443 33334445589999999999999998
Q ss_pred CcchHHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 347 GGSAMVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 347 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
+ +...+.+.+.+.++.. +...+.+|++
T Consensus 186 ~-~~~~f~~~a~l~ll~~-~~~~~~~E~~ 212 (468)
T TIGR00788 186 L-TRILFLITAALLLLQL-FVSNLSKERR 212 (468)
T ss_pred C-cchHHHHHHHHHHHHH-HHHHhccccc
Confidence 8 8888888887777774 3445677754
No 252
>KOG0252|consensus
Probab=98.01 E-value=5.3e-05 Score=68.58 Aligned_cols=94 Identities=16% Similarity=0.143 Sum_probs=63.6
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc---------------h--hHHHHHHHHHHHHHHhh-chh
Q psy6665 240 RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE---------------K--SLIPVFCILFYVAISVI-GML 301 (420)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~-~~~ 301 (420)
+...+.......++.++|+++.|++.||+|||++.-..+++ . .....+...-+..+.+. +=.
T Consensus 83 s~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDY 162 (538)
T KOG0252|consen 83 SGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDY 162 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCC
Confidence 34455677778899999999999999999999875544443 1 22222222222333333 337
Q ss_pred hHHHHHhcccCChhhhhhhHHHHHHHHHHHHH
Q psy6665 302 SIPWTMTAEIFPLEIRGIAQGLTFCLAHILMF 333 (420)
Q Consensus 302 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 333 (420)
|+..+..+|....+.||.-.+.....+..|..
T Consensus 163 PlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 163 PLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred cchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 89889999999999999887766665554433
No 253
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.00 E-value=0.00017 Score=66.71 Aligned_cols=153 Identities=12% Similarity=0.142 Sum_probs=103.7
Q ss_pred hhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc----CchhhHhhhccc----------------
Q psy6665 223 IYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY----GRRSLTMFSQIE---------------- 280 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~----g~~~~~~~~~~~---------------- 280 (420)
......|+..|+.+. |+ +..++.+..+.-+..++.-++.|.++||. ||+|..++...+
T Consensus 28 ~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~ 107 (467)
T COG2211 28 FGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFS 107 (467)
T ss_pred HHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcc
Confidence 455677888888887 88 88888899999999999999999999974 665554443322
Q ss_pred ---hhHHHHHHHHHHHHHHhhchhhHHHHHhcccCC-hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCc------ch
Q psy6665 281 ---KSLIPVFCILFYVAISVIGMLSIPWTMTAEIFP-LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGG------SA 350 (420)
Q Consensus 281 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~------~~ 350 (420)
......+...++..++.....| ..++.+|+.+ +++|.+..+.-.....+|+.+...+.+.+....|+ +.
T Consensus 108 ~~~k~~ya~vtY~l~~l~YT~vniP-y~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~ 186 (467)
T COG2211 108 MTGKLIYALVTYMLLGLGYTLVNIP-YGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQ 186 (467)
T ss_pred cCcchHHHHHHHHHHHHHHHheeCc-hhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHH
Confidence 1111122222222333322222 2377777754 67899999999999999999888888887766552 44
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 351 MVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
....+++++.++..+++++-.+|+..
T Consensus 187 ~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 187 GTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 55566667777777777766666543
No 254
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.92 E-value=0.00024 Score=63.95 Aligned_cols=131 Identities=15% Similarity=0.129 Sum_probs=107.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHH-hhcchhHHHHhhHHHHHHHHHHHHh-----HHHHHhhccccccchhHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLR-TYGRRSLTMFSGLGMAVCMTTSGYY-----TQLIMTGQIEKSLIPVFC 73 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~~~r~~~~~~~~~~ 73 (420)
||.+..+.....+....|..+|... |++.. |.++|+.-.+++....++..+..++ .+.+...-
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~---------- 308 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGV---------- 308 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH----------
Confidence 5677888888899999999999999 88887 6888888888888888877766655 56677777
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh--------------hhHHHHHhHhh
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL--------------HWRTVAWLSLA 139 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~--------------~wr~~f~~~~~ 139 (420)
++.|++.| .+.....+.+.|..++++.|..+|.++..+.++..++..+++.+ +|...|.+.++
T Consensus 309 --~l~G~g~G-~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ 385 (403)
T PF03209_consen 309 --FLLGLGNG-LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAV 385 (403)
T ss_pred --HHHHHhhh-HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99999999 99998999999999999999999999999988777777776665 46666766666
Q ss_pred hcccc
Q psy6665 140 YILIP 144 (420)
Q Consensus 140 ~~~~~ 144 (420)
..++.
T Consensus 386 ll~~a 390 (403)
T PF03209_consen 386 LLLAA 390 (403)
T ss_pred HHHHH
Confidence 65554
No 255
>KOG3810|consensus
Probab=97.90 E-value=0.00034 Score=61.05 Aligned_cols=321 Identities=12% Similarity=0.108 Sum_probs=174.1
Q ss_pred HHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccchhhhhhh
Q psy6665 18 RMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVYI 94 (420)
Q Consensus 18 g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~i 94 (420)
.+.++.++ =.+.|-.--|+++++-.+..........+. .+.+=+.. +..|...+ .-. +-++|+
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE------------~FyG~~tA-aEI-AYysYI 119 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLE------------FFYGPATA-AEI-AYYSYI 119 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeeh------------hhcChHHH-HHH-hhhhee
Confidence 34555566 677888877888887655555444444444 55555566 77777766 444 488999
Q ss_pred hhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh------hhHHHHHhH---hhhccccccceeeecCcHHHHHHHHHHH
Q psy6665 95 TEVARPDLRGALICIGPSITSLGMVIVYALGAVL------HWRTVAWLS---LAYILIPSPVWLLNKGRANQALKSLKYL 165 (420)
Q Consensus 95 ~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~------~wr~~f~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 165 (420)
-+..+|+++.++.+...+..-.|...|..++..+ +++..-.+. ..+..+. .++ .++.+ +.. ..-
T Consensus 120 Ys~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~--A~f-LP~v~-rSl---~f~ 192 (433)
T KOG3810|consen 120 YSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLL--ALF-LPRVK-RSL---YFH 192 (433)
T ss_pred eeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHH--Hhh-CCCCc-hhh---hhh
Confidence 9999999999999999999999988888888776 222222211 1111111 111 11111 110 000
Q ss_pred hcchhhhhhhHHHHhhhccchhhhh----hhhHHHHHh-hccccchHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-
Q psy6665 166 ARNYKEVKNKEQELKKMNSTKENQS----LSARLIKMV-TMATGIKPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS- 239 (420)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~- 239 (420)
+++++.... +. ++...+.+. +.-+..+++ .....+++.+..-.++.....++++.+.+|.....++..-
T Consensus 193 ~~~~~~~v~---~~--e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~ 267 (433)
T KOG3810|consen 193 RLEDKISVG---DL--EEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPN 267 (433)
T ss_pred cccccceec---cc--hhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCC
Confidence 000000000 00 111111000 111112221 1222333344444455566666788888888888776522
Q ss_pred --cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHh--hhccc------------hhHHHHHHHHHHHHHHhhchhhH
Q psy6665 240 --RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTM--FSQIE------------KSLIPVFCILFYVAISVIGMLSI 303 (420)
Q Consensus 240 --~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~--~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
...-+..=.+..+.++++.+..|++.-.+.|+.-++ ++... +-|.......++...+... .++
T Consensus 268 ~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~-iti 346 (433)
T KOG3810|consen 268 PANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLT-ITI 346 (433)
T ss_pred chhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhh-hhH
Confidence 112223445556778888889999876666653222 22222 2222233333333333333 344
Q ss_pred HHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC----------cchHHHHHHHHHHHHHHHHhh
Q psy6665 304 PWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG----------GSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 304 ~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~ 368 (420)
....+++....+.-|..+|+..++.-+...+-..+. .|..| -+...|.+++++.++...+.+
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~iV---vd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFVALILQSILTLIV---VDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEEE---EcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 445555666777789999999988877776655544 44322 134567777777777766543
No 256
>KOG3574|consensus
Probab=97.78 E-value=0.002 Score=57.23 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=60.1
Q ss_pred HHHHHhhcchhHHHH-hhHHHHHHHHHHHHhHHHHHhhccccccchhH-H--HHHHHHHHhhcccchhhhhhhhhccCcc
Q psy6665 26 SQLLRTYGRRSLTMF-SGLGMAVCMTTSGYYTQLIMTGQIEKSLIPVF-C--ILFYVAISVIAMGPSPAIVYITEVARPD 101 (420)
Q Consensus 26 g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~--~~~l~G~~~~~~~~~~~~~~i~e~~~~~ 101 (420)
...+.|+||||..++ +..+.+..+...+......+.. ..+...+. . .|++.-+.++ .-.++.-.+.-.+..++
T Consensus 89 s~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~--ng~~p~v~~lt~~f~LLnflaA-tQDIAVDgwALtmLs~e 165 (510)
T KOG3574|consen 89 SVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGG--NGGLPNVVALTLLFLLLNFLAA-TQDIAVDGWALTMLSRE 165 (510)
T ss_pred HHHHHhhccccceeeehHHHHHHHHHHHhhCCCccccc--CCCCcchHHHHHHHHHHHHHHh-hhhhhhhHHHHHhcCHh
Confidence 333349999987665 3333333333332221111111 12222222 2 4677778888 77787888888899999
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHh
Q psy6665 102 LRGALICIGPSITSLGMVIVYALG 125 (420)
Q Consensus 102 ~r~~~~~~~~~~~~lG~~~~~~~~ 125 (420)
+-|-+......+.+.|.+++..+-
T Consensus 166 ~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 166 NLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hcCchhHHHHHHHhhhHHhhccee
Confidence 999998888888888888876543
No 257
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=97.74 E-value=0.0043 Score=57.37 Aligned_cols=111 Identities=14% Similarity=0.175 Sum_probs=65.0
Q ss_pred HHHHHHHHH-HHHHHhhcchhHHHH-hhHHHHHHHHHHHHhH-HHH--------Hhhcccc--ccch--hH-HHHHHHHH
Q psy6665 17 VRMVFGLLT-SQLLRTYGRRSLTMF-SGLGMAVCMTTSGYYT-QLI--------MTGQIEK--SLIP--VF-CILFYVAI 80 (420)
Q Consensus 17 ~g~~~~~~~-g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~-~~~--------~~~r~~~--~~~~--~~-~~~~l~G~ 80 (420)
+-..-++++ ...+.|+||||..++ .-.+.++..+..+... ..+ ...+.+. .... .+ ..|++.=+
T Consensus 51 lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~f 130 (544)
T PF13000_consen 51 LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVF 130 (544)
T ss_pred HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHH
Confidence 333445555 888889999988776 4444444444444331 111 1111110 0011 11 22333434
Q ss_pred HhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 81 SVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 81 ~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
-++ .-..+.-.+.-.+..+++++.+..-...+.+.|.+++..+--.+
T Consensus 131 l~A-TQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 131 LCA-TQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HHc-cCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 455 55566777778888899999999999999999988887654443
No 258
>KOG4332|consensus
Probab=97.71 E-value=0.00063 Score=57.26 Aligned_cols=75 Identities=15% Similarity=0.067 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHHHHhhcccch
Q psy6665 11 TVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPS 88 (420)
Q Consensus 11 ~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~ 88 (420)
.+..++-..++-..+ |-++||-|||+.-+.-.+.+.++++.---- |-.++++| ++-|+..+ ....
T Consensus 77 LfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR------------~LGGiaTs-LLFS 143 (454)
T KOG4332|consen 77 LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGR------------VLGGIATS-LLFS 143 (454)
T ss_pred eeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehh------------hhhhHHHH-HHHH
Confidence 333333334444445 999999999996555444444433322211 88899999 99999988 5544
Q ss_pred hhh-hhhhhcc
Q psy6665 89 PAI-VYITEVA 98 (420)
Q Consensus 89 ~~~-~~i~e~~ 98 (420)
.-- =++.|.-
T Consensus 144 aFEsWliaEHn 154 (454)
T KOG4332|consen 144 AFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHhh
Confidence 333 3566665
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.71 E-value=0.00016 Score=49.16 Aligned_cols=59 Identities=14% Similarity=0.269 Sum_probs=51.3
Q ss_pred HhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhh
Q psy6665 219 QLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFS 277 (420)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~ 277 (420)
.+++...+.-|.|.++++.|+ +.+.+....+..+..+++.++.|.++||.++++.....
T Consensus 12 ~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~ 71 (77)
T PF12832_consen 12 YFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLG 71 (77)
T ss_pred HHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHH
Confidence 334466788899999998899 89999999999999999999999999999998876554
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.62 E-value=0.002 Score=63.38 Aligned_cols=144 Identities=10% Similarity=0.103 Sum_probs=90.6
Q ss_pred hHHHhHHHHHHh-hCC-cchHHHHHHHHHHHHHHHHHHHHHhhhc-cCchhhHhhhccc----------hh-------H-
Q psy6665 225 ITIFYAVQFLED-MGS-RMNVYLATVLVGVVRMVFGLLTSQLLRT-YGRRSLTMFSQIE----------KS-------L- 283 (420)
Q Consensus 225 ~~~~~~~~~~~~-~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~g~~~~~~~~~~~----------~~-------~- 283 (420)
.+...+..|+.+ .|+ ...+......+....-+..+++|+++|+ +|+++.+..+.++ .. .
T Consensus 5 Gm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 5 GMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred ecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 334444444443 377 5556666666666667778888999997 5888887776665 00 0
Q ss_pred -HHHHHHHHHHHHHhhchhhHHHHHhcccCChh---hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC------cchHHH
Q psy6665 284 -IPVFCILFYVAISVIGMLSIPWTMTAEIFPLE---IRGIAQGLTFCLAHILMFFALQYYPWFKDSVG------GSAMVQ 353 (420)
Q Consensus 284 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g------~~~~~~ 353 (420)
...+..+.+..+...++-|...+...|.++++ .+...+.+.....++|+.+++.+.+++.+..+ ++...|
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAF 164 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHH
Confidence 01111222222223334455557778877643 46778899999999999999999999875541 266677
Q ss_pred HHHHHHHHHHHHHhh
Q psy6665 354 WFFALISVISIVYVY 368 (420)
Q Consensus 354 ~~~~~~~~~~~~~~~ 368 (420)
.+.+++.+++.++..
T Consensus 165 ~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 165 GVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777766666665543
No 261
>KOG3762|consensus
Probab=97.62 E-value=9.5e-05 Score=68.29 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccchhh
Q psy6665 14 VGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPA 90 (420)
Q Consensus 14 ~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~ 90 (420)
....|-+..-++ +++..|+|+-+++..++.+..+=.+...+. .|+.+... +++|+..+ .....+
T Consensus 414 ~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPie------------ilqgit~a-liWaa~ 480 (618)
T KOG3762|consen 414 LCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIE------------ILQGITHA-LIWAAI 480 (618)
T ss_pred hhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHH------------HHHHHHHH-HHHHHH
Confidence 345566666677 999999999999999999998888888877 88888899 99999999 777779
Q ss_pred hhhhhhccCccchhhhHhHHHHHH-HHHHHHHHHHhhh----hhhHHHHHhHhhhcccc
Q psy6665 91 IVYITEVARPDLRGALICIGPSIT-SLGMVIVYALGAV----LHWRTVAWLSLAYILIP 144 (420)
Q Consensus 91 ~~~i~e~~~~~~r~~~~~~~~~~~-~lG~~~~~~~~~~----~~wr~~f~~~~~~~~~~ 144 (420)
.+|++...||+-|..+.++.+... ++|--+|+++++. ++=|..|.+.++.+++.
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~ 539 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVT 539 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHH
Confidence 999999999999999999875443 4555555555554 47788888877777665
No 262
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.40 E-value=0.0088 Score=54.68 Aligned_cols=166 Identities=9% Similarity=0.053 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHh--hCC-cchHHHHH-HHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLED--MGS-RMNVYLAT-VLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE- 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~-~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~- 280 (420)
+.....+...++..+ -..-.|+..|+.+ .|+ ..+...-. -+..=..+..-+....+.|.++-|++++++.+.
T Consensus 5 ~~~~llc~~gf~~~f---rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~ 81 (412)
T PF01770_consen 5 KITLLLCLFGFFKEF---RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHHHHHHhc---CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 334444444444333 2233344455544 477 44433222 122223344555677789999999998888776
Q ss_pred -hhHHH------HHHHHHHHHHHhh--chhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC-cch
Q psy6665 281 -KSLIP------VFCILFYVAISVI--GMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG-GSA 350 (420)
Q Consensus 281 -~~~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g-~~~ 350 (420)
..+.. +..+-+...+++. +.-...++++-...|+++-.++.+......-+|.+++..++-.+....+ ++.
T Consensus 82 i~t~~lll~~~sv~~mq~~q~~yg~~~a~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~ 161 (412)
T PF01770_consen 82 IITWLLLLFGTSVLAMQLMQFFYGLATAAEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYF 161 (412)
T ss_pred HHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 11111 1111122222222 2234455777777888888899999999999998888888776666433 133
Q ss_pred HHHHHHHHHHHHHHHHhhhccccCC
Q psy6665 351 MVQWFFALISVISIVYVYIFLPETH 375 (420)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (420)
....+......++.++. +++|..+
T Consensus 162 ~L~~isl~~~~~a~~~~-~fLP~~~ 185 (412)
T PF01770_consen 162 QLNYISLASVSLALLIA-LFLPMPK 185 (412)
T ss_pred HHHHHHHHHHHHHHHHH-HHcCCCC
Confidence 33334334344444444 4566544
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.40 E-value=0.06 Score=51.05 Aligned_cols=109 Identities=6% Similarity=-0.030 Sum_probs=74.6
Q ss_pred HHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHH-------HHhhc----c--c-------cccchhHHHHHH
Q psy6665 20 VFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQL-------IMTGQ----I--E-------KSLIPVFCILFY 77 (420)
Q Consensus 20 ~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~-------~~~~r----~--~-------~~~~~~~~~~~l 77 (420)
.+.... .++++|++|.+++-+....+.....++++. ++. -...+ . . .+.+...++|+.
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 344555 999999999999988877777777666664 110 00000 0 0 011222345666
Q ss_pred HHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 78 VAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 78 ~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
.-+-........-+.+..|.++.+|-.+..++.+.+.++|.++++.+...+
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666223335789999999999999999999999999999988776655
No 264
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.30 E-value=3.5e-05 Score=73.90 Aligned_cols=140 Identities=10% Similarity=0.071 Sum_probs=0.9
Q ss_pred HHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------------------------
Q psy6665 231 VQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------------------------- 280 (420)
Q Consensus 231 ~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------------------------- 280 (420)
..+-++.++ ..+.+.+.+..-++.++..++..++.+|..|-+.+-.+.++
T Consensus 27 ttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~ 106 (539)
T PF03137_consen 27 TTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGN 106 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccc
Confidence 333333477 88889999999999999999999998887665555555444
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHhhc---hhhHHHHHhcccCChhhhhhhHHHHHHHH
Q psy6665 281 -----------------------------KSLIPVFCILFYVAISVIG---MLSIPWTMTAEIFPLEIRGIAQGLTFCLA 328 (420)
Q Consensus 281 -----------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~r~~~~g~~~~~~ 328 (420)
.....+.++.+.....+.| ..++..+|+-|..+++..+...|+.....
T Consensus 107 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~ 186 (539)
T PF03137_consen 107 SSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMS 186 (539)
T ss_dssp ---------------------------------------------SSS--------------------------------
T ss_pred cccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHh
Confidence 0011112222222222222 35666689999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHh---------------------cCcchHHHHHHHHHHHHHHHHhhhc
Q psy6665 329 HILMFFALQYYPWFKDS---------------------VGGSAMVQWFFALISVISIVYVYIF 370 (420)
Q Consensus 329 ~~~~~~~~~~~g~l~~~---------------------~g~~~~~~~~~~~~~~~~~~~~~~~ 370 (420)
.+|.++|-.+.+...+. .|.||..|++.+.+.++..+..+.+
T Consensus 187 ~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F 249 (539)
T PF03137_consen 187 ILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF 249 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred hccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888887777655432 2335666677777777666665433
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.24 E-value=0.023 Score=44.69 Aligned_cols=101 Identities=8% Similarity=0.098 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc----------hhHHHHHHHHHHHHHHhhchhhHHHHHhccc
Q psy6665 242 NVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE----------KSLIPVFCILFYVAISVIGMLSIPWTMTAEI 311 (420)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (420)
.......+......+.+++.+.+.+++|.|+.++++.+. ..+..++....+.+......+.....++.+.
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 344555666677788888899999999999999999887 2222223333333333323344445788888
Q ss_pred CChhhhhhhHHHHHHHHHHHHHHHHHHhHHH
Q psy6665 312 FPLEIRGIAQGLTFCLAHILMFFALQYYPWF 342 (420)
Q Consensus 312 ~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l 342 (420)
..++.+++..++.-.+...+.++|..+.-.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999998888888877776665443
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.02 E-value=0.014 Score=54.99 Aligned_cols=136 Identities=15% Similarity=0.178 Sum_probs=82.0
Q ss_pred hhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccC-----chhhHhhhccc--------------hhHHHHHHHHHHHHH
Q psy6665 236 DMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYG-----RRSLTMFSQIE--------------KSLIPVFCILFYVAI 295 (420)
Q Consensus 236 ~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g-----~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 295 (420)
+.|+ +.+........ -.-....++.|.++|.+. ||..++++.++ ..........++...
T Consensus 19 ~l~ls~~~~~~~~~~~-~lPw~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~ 97 (433)
T PF03092_consen 19 DLGLSPAQLQRLSSLA-SLPWSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLAS 97 (433)
T ss_pred HcCCCHHHHHHHHHHH-hCchHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHH
Confidence 3476 33333333322 223355678999999973 44444444433 111112112222222
Q ss_pred Hhhch-hhHHHHHhcccC---ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhhhcc
Q psy6665 296 SVIGM-LSIPWTMTAEIF---PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 296 ~~~~~-~~~~~~~~~~~~---p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
++... -.+.-++..|.. |.+ +|...+.......+|+.++..+.|.+.+..+ +...+.+.+.+..+..+...+..
T Consensus 98 ~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~~~~~~~~~ 175 (433)
T PF03092_consen 98 FGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLMLIVALFLL 175 (433)
T ss_pred HHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHHHHHHHHhh
Confidence 22222 222336666664 444 7888889999999999999999999999988 88888888888777777666666
Q ss_pred ccC
Q psy6665 372 PET 374 (420)
Q Consensus 372 ~~~ 374 (420)
+|+
T Consensus 176 ~e~ 178 (433)
T PF03092_consen 176 EER 178 (433)
T ss_pred hhc
Confidence 663
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.99 E-value=0.11 Score=49.11 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhhccCchhhHhhhccc----------------hh-----------------------
Q psy6665 243 VYLATVLVGVVRMVF-GLLTSQLLRTYGRRSLTMFSQIE----------------KS----------------------- 282 (420)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~~~g~l~d~~g~~~~~~~~~~~----------------~~----------------------- 282 (420)
..+.-....+...+. .++.+++++|++|++..-..... ..
T Consensus 45 i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~ 124 (472)
T TIGR00769 45 IPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIA 124 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHH
Confidence 344444443444444 78889999999999775543332 00
Q ss_pred ---HHHHHHHHHHHHHHhhchhh-HHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q psy6665 283 ---LIPVFCILFYVAISVIGMLS-IPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD 344 (420)
Q Consensus 283 ---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~ 344 (420)
.+......+..-.++....+ +.|.+++|++.+++..+.+++.....++|..+++.+..++.+
T Consensus 125 ~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 125 ILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222222233333333 778999999999999999999999999999999999888763
No 268
>KOG2563|consensus
Probab=96.94 E-value=0.019 Score=52.46 Aligned_cols=106 Identities=19% Similarity=0.214 Sum_probs=70.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------h---hHHH--HHHHHHHHHHHhhch-h
Q psy6665 241 MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------K---SLIP--VFCILFYVAISVIGM-L 301 (420)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------~---~~~~--~~~~~~~~~~~~~~~-~ 301 (420)
..+-+...++.+..++..+.+-|+.||+|-|....++... . +... +....-........+ .
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh
Confidence 4455777788889999999999999999999988888776 1 1111 111110111111111 1
Q ss_pred hHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhc
Q psy6665 302 SIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSV 346 (420)
Q Consensus 302 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 346 (420)
.++.-...--||+++|+++..+..+...+|.+++..+-+.+..+.
T Consensus 159 ~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 159 GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 111122334589999999999999999999999888888777655
No 269
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.74 E-value=0.26 Score=46.33 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=28.6
Q ss_pred hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHH
Q psy6665 301 LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQY 338 (420)
Q Consensus 301 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 338 (420)
.+....+..+..++++|..+-.+....-.+|-.+|..+
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777888888888888777777777777776655
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.67 E-value=0.0038 Score=52.71 Aligned_cols=44 Identities=23% Similarity=0.350 Sum_probs=32.7
Q ss_pred cchhhhHhHHHHHHHHHHHHHHHH--hh-h----h--hhHHHHHhHhhhcccc
Q psy6665 101 DLRGALICIGPSITSLGMVIVYAL--GA-V----L--HWRTVAWLSLAYILIP 144 (420)
Q Consensus 101 ~~r~~~~~~~~~~~~lG~~~~~~~--~~-~----~--~wr~~f~~~~~~~~~~ 144 (420)
++|+..+.+...+.++|.++.-.. -. - . +|++.+.+.+++.++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~Ip 54 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIP 54 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888889999998776432 22 1 1 7999999888877665
No 271
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.65 E-value=0.0068 Score=41.23 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=37.8
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHH
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGM 45 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~ 45 (420)
|.+..+.....++..+...+++++ |.++||+||++.++....++
T Consensus 31 Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 31 GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 567788888899999999999999 99999999998888766554
No 272
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.63 E-value=0.0056 Score=56.49 Aligned_cols=96 Identities=9% Similarity=-0.010 Sum_probs=75.8
Q ss_pred hHHHHhhHHHHHHHHHHHHh-----H------HHHHhhccccccchhHHHHHHHHHHhhcccchhhhhhhhhccCcc---
Q psy6665 36 SLTMFSGLGMAVCMTTSGYY-----T------QLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVYITEVARPD--- 101 (420)
Q Consensus 36 ~~l~~~~~~~~~~~~~~~~~-----~------~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~--- 101 (420)
|+++++.+++.+|.++..++ . ..++++- .+.++|.| ..-+...++++|-++++
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL------------~lia~G~G-~~K~ni~~~~~dq~~~~~~~ 68 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGL------------ALIAVGTG-GIKPNISPFGADQYDEDDDS 68 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHH------------HHHHHHHH-CCHHHHHHHHHHCSSTTTTT
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHH------------HHHHhccc-cccccHHHHHHHHhcccchh
Confidence 56788888999998886655 1 3455555 78999999 77787999999999876
Q ss_pred chhhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhcccc
Q psy6665 102 LRGALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILIP 144 (420)
Q Consensus 102 ~r~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~~ 144 (420)
+|.....++..+.++|..++..+..++ +|.+.|.+.++..++.
T Consensus 69 ~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~ 115 (372)
T PF00854_consen 69 RRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLA 115 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHH
Confidence 467777888999999999999888887 7999999888776665
No 273
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.44 E-value=0.29 Score=46.58 Aligned_cols=42 Identities=24% Similarity=0.214 Sum_probs=38.3
Q ss_pred HHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHH
Q psy6665 303 IPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKD 344 (420)
Q Consensus 303 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~ 344 (420)
..|.++.|+++.++..+.+++.....++|..++..+..++.+
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999888888777
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.31 E-value=0.029 Score=38.67 Aligned_cols=54 Identities=17% Similarity=0.046 Sum_probs=48.9
Q ss_pred CCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh
Q psy6665 2 GSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 2 ~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 55 (420)
+.|.++.....+.+++|+.+|++. .++.++..+++.+..+.+...+..+.+++.
T Consensus 23 ~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 23 GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888899999999999999 999999888999999999999999999887
No 275
>KOG3626|consensus
Probab=96.28 E-value=0.017 Score=56.58 Aligned_cols=138 Identities=9% Similarity=0.084 Sum_probs=90.2
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc------------------------------------
Q psy6665 238 GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE------------------------------------ 280 (420)
Q Consensus 238 g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~------------------------------------ 280 (420)
++ ..+.+.+...+-++..+...+..+..-|..|-+.+-.+.++
T Consensus 128 ~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~ 207 (735)
T KOG3626|consen 128 KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSL 207 (735)
T ss_pred CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcccc
Confidence 66 66777777777778887777777777777665544333333
Q ss_pred ------------------------hhHHHHHHHHHHHHHHhhc---hhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHH
Q psy6665 281 ------------------------KSLIPVFCILFYVAISVIG---MLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMF 333 (420)
Q Consensus 281 ------------------------~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~ 333 (420)
.+...++++++.....+.| ..++..+|+-|...+++.....|+..++..+|-+
T Consensus 208 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPa 287 (735)
T KOG3626|consen 208 SFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPA 287 (735)
T ss_pred chhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhH
Confidence 1111222222222222333 3556668999999988889999999999999998
Q ss_pred HHHHHhHHHHHh------------------cCcchHHHHHHHHHHHHHHHHhhhccccCCC
Q psy6665 334 FALQYYPWFKDS------------------VGGSAMVQWFFALISVISIVYVYIFLPETHG 376 (420)
Q Consensus 334 ~~~~~~g~l~~~------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (420)
+|-.+.++..+. .|.||.-|++.+.+.++..+..+ +.|+...
T Consensus 288 iGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f-~fPk~lp 347 (735)
T KOG3626|consen 288 IGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF-FFPKELP 347 (735)
T ss_pred HHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH-hCcccCc
Confidence 888888777642 23356677777888887777765 4454433
No 276
>KOG0637|consensus
Probab=96.28 E-value=0.0022 Score=58.40 Aligned_cols=134 Identities=12% Similarity=0.156 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHhcchhhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhc----cCchhhHhhhccc
Q psy6665 206 KPLLVITVLFALQQLAGIYITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRT----YGRRSLTMFSQIE 280 (420)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~g~~~~~~~~~~~ 280 (420)
+.++.........+++ ...-..|.+.|+++.|. ....+..-....+.+++.+++.|..+|| +||||..+.....
T Consensus 32 ~~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFG-WALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 4445555555555654 45566788888888898 5566666677778899999999999997 6888876665544
Q ss_pred -----------------------hh-HHHHHHHHHHHHHHhh-----chhhHHHHHhcccCChhhhhh-hHHHHHHHHHH
Q psy6665 281 -----------------------KS-LIPVFCILFYVAISVI-----GMLSIPWTMTAEIFPLEIRGI-AQGLTFCLAHI 330 (420)
Q Consensus 281 -----------------------~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~~~r~~-~~g~~~~~~~~ 330 (420)
.. .....+.....++.-. .....+-++..|+...+.+.+ +++....+..+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 01 1111111111111111 122233488899887777767 99999999999
Q ss_pred HHHHHHHHhH
Q psy6665 331 LMFFALQYYP 340 (420)
Q Consensus 331 ~~~~~~~~~g 340 (420)
|+.++-.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 9988755554
No 277
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.01 E-value=0.38 Score=44.90 Aligned_cols=144 Identities=15% Similarity=0.146 Sum_probs=81.4
Q ss_pred HHHhHHHHHHhh---CCcchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-------------------h--
Q psy6665 226 TIFYAVQFLEDM---GSRMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-------------------K-- 281 (420)
Q Consensus 226 ~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-------------------~-- 281 (420)
..+-.+.++.+. ++ .-.......-.+..++.++..|...||..|.+....+... .
T Consensus 21 w~Fa~~L~L~~i~p~sL-l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~ 99 (432)
T PF06963_consen 21 WEFAVPLFLISIFPGSL-LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSS 99 (432)
T ss_pred HHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 444445555554 22 2233444555677788888889999999998876666555 0
Q ss_pred ---hHHHHHHHHHHHHHHhh-chhhHHHHHhcc------cC--ChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcc
Q psy6665 282 ---SLIPVFCILFYVAISVI-GMLSIPWTMTAE------IF--PLEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGS 349 (420)
Q Consensus 282 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~--p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~ 349 (420)
.+....++......... -..........| +. +++.....++...-+=..-..++|.+.|.+.+..+ .
T Consensus 100 ~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s-~ 178 (432)
T PF06963_consen 100 SQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFAS-P 178 (432)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-H
Confidence 11111111111111111 111121122211 22 33444555555555556778899999999999888 7
Q ss_pred hHHHHHHHHHHHHHHHHhhhcc
Q psy6665 350 AMVQWFFALISVISIVYVYIFL 371 (420)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ 371 (420)
.....+.++..+++...=+.++
T Consensus 179 ~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 179 VIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777777777644443
No 278
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.80 E-value=0.68 Score=40.68 Aligned_cols=120 Identities=17% Similarity=0.153 Sum_probs=78.5
Q ss_pred HHHhHHHHHHhhCC-c--chHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhccc-----------hh--HHHHHHH
Q psy6665 226 TIFYAVQFLEDMGS-R--MNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQIE-----------KS--LIPVFCI 289 (420)
Q Consensus 226 ~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~-----------~~--~~~~~~~ 289 (420)
.....+.+..+.+. . ...........+...++.++.|.+.||.|||+.+..+... .. .......
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLIL 100 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 34455555555443 2 3567777888888888889999999999998776655531 11 1222222
Q ss_pred HHHHHHHhhchhhHHHHHhcccCCh-hhhhhhHHHHHH-HHHHHHHHHHHHhHHHHHh
Q psy6665 290 LFYVAISVIGMLSIPWTMTAEIFPL-EIRGIAQGLTFC-LAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~p~-~~r~~~~g~~~~-~~~~~~~~~~~~~g~l~~~ 345 (420)
....+.......+...++..|..|+ +.|+...+.... ...++..++|.+.+.+...
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 101 RLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222223456667889999997 678888888888 5777888888777766655
No 279
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.62 E-value=2 Score=40.31 Aligned_cols=111 Identities=5% Similarity=-0.100 Sum_probs=80.0
Q ss_pred HHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-H--H-----HHHhhc-----cc---------cccchhHHH
Q psy6665 18 RMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-T--Q-----LIMTGQ-----IE---------KSLIPVFCI 74 (420)
Q Consensus 18 g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~--~-----~~~~~r-----~~---------~~~~~~~~~ 74 (420)
+.++..++ +++.+++.|.+++-.-...+....+++++. + . -....| .. .+-+...++
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 45555667 999999999999999888888888888876 2 0 001111 00 122334455
Q ss_pred HHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 75 LFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 75 ~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
|++.=+-..-.....-+....|.+..+|-.|..+..+.+.+++.++++.+..++
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666233335678899999999999999999999999999998887776
No 280
>PRK03612 spermidine synthase; Provisional
Probab=94.73 E-value=0.59 Score=45.12 Aligned_cols=122 Identities=13% Similarity=0.089 Sum_probs=63.1
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHH
Q psy6665 1 MGSRMNVYLATVLVGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYV 78 (420)
Q Consensus 1 ~~~~~~~~~~~~~~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~ 78 (420)
+|.+...+..++++++.|..+|+.. +++.++--|+.. ..-..+ ++...+.... +...-.. .........+.++.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i-~l~~~~~~~ll~~~~~~~--~~~~~~~~~~~~~~ 120 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLL-ALLGGLSALILYAAFAFQ--GLSRLLLYVLVLLI 120 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 3667778899999999999999999 887644333322 111111 1111111111 1000000 00011112234556
Q ss_pred HHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 79 AISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 79 G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
++..| ...|....+..+.. .++-+...|-......+|.++|.++.+++
T Consensus 121 ~~l~G-~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 121 GLLIG-MEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHH-HHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 77777 55554444443322 22235666777777777777777776654
No 281
>KOG1237|consensus
Probab=94.65 E-value=3.6 Score=40.22 Aligned_cols=133 Identities=11% Similarity=-0.013 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh--HHHHHhh----------ccccc-c-chhH-H
Q psy6665 11 TVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTG----------QIEKS-L-IPVF-C 73 (420)
Q Consensus 11 ~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~----------r~~~~-~-~~~~-~ 73 (420)
.+..+.--....++. ++++|- +||=+++.++.++..++.++..+. ...+... ....+ . ..++ .
T Consensus 78 ~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~ 157 (571)
T KOG1237|consen 78 NVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYG 157 (571)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHH
Confidence 333333334444566 999996 789899999999999987666555 2222211 01111 1 1111 2
Q ss_pred HHHHHHHHhhcccchhhhhhhhhccC---ccc-h--hhhHhHHHHHHHHHHHHHHHHhhhh----hhHHHHHhHhhhccc
Q psy6665 74 ILFYVAISVIAMGPSPAIVYITEVAR---PDL-R--GALICIGPSITSLGMVIVYALGAVL----HWRTVAWLSLAYILI 143 (420)
Q Consensus 74 ~~~l~G~~~~~~~~~~~~~~i~e~~~---~~~-r--~~~~~~~~~~~~lG~~~~~~~~~~~----~wr~~f~~~~~~~~~ 143 (420)
-+-+..+|.| ..-+...++-+|=++ +++ + ...+.++....++|..++..+..+. +|.+.|.+..+...+
T Consensus 158 ~l~lia~G~g-g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~l 236 (571)
T KOG1237|consen 158 ALYLIALGAG-GIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNAL 236 (571)
T ss_pred HHHHheeccC-CCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHH
Confidence 3556667888 555557888888887 322 2 3566677777888888887766665 788877666555444
Q ss_pred c
Q psy6665 144 P 144 (420)
Q Consensus 144 ~ 144 (420)
.
T Consensus 237 a 237 (571)
T KOG1237|consen 237 A 237 (571)
T ss_pred H
Confidence 3
No 282
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=94.63 E-value=4 Score=38.40 Aligned_cols=44 Identities=18% Similarity=0.213 Sum_probs=38.4
Q ss_pred hHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 302 SIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 302 ~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
-+.|..+.|++..++..+.+++.+...+++..++..+..++.++
T Consensus 167 ~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 167 LLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35678899999999999999999999999999998888887664
No 283
>KOG3098|consensus
Probab=94.16 E-value=1.3 Score=41.60 Aligned_cols=111 Identities=16% Similarity=0.092 Sum_probs=76.8
Q ss_pred HHHHHHHHHH-HHHH---HhhcchhHHHHhhHHHHHHHHHHHHhHHHHHhhcc--------ccccchhHHHHHHHHHHhh
Q psy6665 16 VVRMVFGLLT-SQLL---RTYGRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQI--------EKSLIPVFCILFYVAISVI 83 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~--------~~~~~~~~~~~~l~G~~~~ 83 (420)
.+|..++... +.+. +++||++.+.++.++..++.++....+..-.-.+. .........+.++.|++.+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3444444455 5555 56999999999999988888877665111111221 1133444557899999999
Q ss_pred cccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 84 AMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 84 ~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
+.....+.++.+.+ +++|..+.++.-.-..++..++.......
T Consensus 369 -~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 369 -CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred -HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 88888999999999 67788999998887777776665554443
No 284
>PRK03612 spermidine synthase; Provisional
Probab=92.92 E-value=7.6 Score=37.64 Aligned_cols=49 Identities=6% Similarity=0.093 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhHHHH-HhcCcchHHHHHHHHHHHHHHHH
Q psy6665 317 RGIAQGLTFCLAHILMFFALQYYPWFK-DSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 317 r~~~~g~~~~~~~~~~~~~~~~~g~l~-~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
-+...|-......+|+++|+++.+++. ...| ......+.+.+.++.++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG-~~~t~~~~a~l~~~~a~~ 192 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLG-LIRTAALTGSLNLLAALV 192 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHH
Confidence 456778888899999999999988755 4778 555555555555554443
No 285
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=92.75 E-value=0.44 Score=32.92 Aligned_cols=56 Identities=18% Similarity=0.004 Sum_probs=46.4
Q ss_pred hhHHHhHHHHHHhhCC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHhhhcc
Q psy6665 224 YITIFYAVQFLEDMGS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFSQI 279 (420)
Q Consensus 224 ~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 279 (420)
+.+...+|.+.++.++ ..+.++..+.+.++.++|.+...++.++.++++.+..+.+
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~ 65 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLL 65 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 3455678888888888 8899999999999999999999999998777777666543
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.24 E-value=1.1 Score=41.37 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=57.4
Q ss_pred HHHhhchhhHHHHHhcccCChh---hhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 294 AISVIGMLSIPWTMTAEIFPLE---IRGIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~p~~---~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
.....+.=|...++..|.++++ .|...+.+.....++|..+++.+.+++.++.| +...|.+.++..+++.+..+
T Consensus 44 a~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 44 AVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHH
Confidence 3334455566678888888765 56778889999999999999999999999999 88888888877777766543
No 287
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.06 E-value=0.67 Score=42.65 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 73 CILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 73 ~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
.+.+..|+..| ..++.....+.|-.|+++|-.+++....+.++|..++.+++-.+
T Consensus 340 ~lif~eGLlGG-a~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 340 VLIFYEGLLGG-ASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHhhh-HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35588999988 77777888899999999999999999999999999999988765
No 288
>KOG2601|consensus
Probab=92.05 E-value=0.43 Score=42.82 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhcchhHHHHhhHHHHHHHHHHHHh
Q psy6665 19 MVFGLLTSQLLRTYGRRSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 19 ~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 55 (420)
..++.++|...|+..|+|++...+.+.=++.++++-.
T Consensus 77 lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vaggl 113 (503)
T KOG2601|consen 77 LVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGL 113 (503)
T ss_pred HhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHH
Confidence 3445555999999999999999998888887777665
No 289
>KOG3097|consensus
Probab=90.82 E-value=12 Score=33.52 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=66.2
Q ss_pred HHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHHHHHh-HHHHHhhccccccchhHHHHHHHHHHhhcccchhhhhh
Q psy6665 16 VVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTTSGYY-TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVY 93 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~ 93 (420)
....+.++++ +.+..++|-|.++.++...+...-...-.- +..++..- ...|++.+ .....--+|
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~------------~~~G~aa~-p~W~SkgtY 134 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAG------------LVLGMAAG-PIWASKGTY 134 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHH------------Hhhccccc-cccccCcce
Confidence 4556677888 999999999999999988887655544444 88888888 99999999 666555666
Q ss_pred hhhccCc--cch-------------hhhHhHHHHHHHHHHHHHHHH
Q psy6665 94 ITEVARP--DLR-------------GALICIGPSITSLGMVIVYAL 124 (420)
Q Consensus 94 i~e~~~~--~~r-------------~~~~~~~~~~~~lG~~~~~~~ 124 (420)
+++.-.. ++| +....++....-.|.+++.++
T Consensus 135 lT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli 180 (390)
T KOG3097|consen 135 LTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLI 180 (390)
T ss_pred ecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHH
Confidence 6655432 223 334445555555665555544
No 290
>KOG4332|consensus
Probab=89.10 E-value=0.89 Score=39.00 Aligned_cols=38 Identities=18% Similarity=0.218 Sum_probs=28.6
Q ss_pred CC-cchHHHHHHHHHHHHHHHHHHHHHhhhccCchhhHh
Q psy6665 238 GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTYGRRSLTM 275 (420)
Q Consensus 238 g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~ 275 (420)
|+ ..+.+..........++...+.|-+.||.|||+..+
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracv 106 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACV 106 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhcccccee
Confidence 66 677776666655666777778889999999997643
No 291
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.10 E-value=0.14 Score=45.75 Aligned_cols=93 Identities=14% Similarity=0.051 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc-CchhhHhhhccc-------------h-h---------HHHHHHHHHHHHHHhhch
Q psy6665 245 LATVLVGVVRMVFGLLTSQLLRTY-GRRSLTMFSQIE-------------K-S---------LIPVFCILFYVAISVIGM 300 (420)
Q Consensus 245 ~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~-------------~-~---------~~~~~~~~~~~~~~~~~~ 300 (420)
.....+.++..+|+.+.++..-+. .+|.+. ...+. . . .....++.....++.-|+
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 346678899999999888743221 233332 22222 1 0 001112222223333333
Q ss_pred -hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHH
Q psy6665 301 -LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQY 338 (420)
Q Consensus 301 -~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~ 338 (420)
.+....+..+..++++|..+-.+....-..|-.+|..+
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH---------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777788888888777766666666666666544
No 292
>KOG1479|consensus
Probab=88.69 E-value=15 Score=34.01 Aligned_cols=18 Identities=11% Similarity=-0.033 Sum_probs=10.4
Q ss_pred hcchhhHHHhHHHHHHhh
Q psy6665 220 LAGIYITIFYAVQFLEDM 237 (420)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~ 237 (420)
....+.+.+-.+++.++.
T Consensus 31 LlpWN~fiTa~~y~~~~~ 48 (406)
T KOG1479|consen 31 LLPWNMFITASDYYYYRF 48 (406)
T ss_pred ccchHhhhccHHHHHhhc
Confidence 334556666666666654
No 293
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=88.52 E-value=8.3 Score=36.40 Aligned_cols=13 Identities=15% Similarity=0.549 Sum_probs=6.9
Q ss_pred HHHhcccCChhhhh
Q psy6665 305 WTMTAEIFPLEIRG 318 (420)
Q Consensus 305 ~~~~~~~~p~~~r~ 318 (420)
..+.+ .+|++..+
T Consensus 128 ~gla~-~fp~~~~~ 140 (437)
T TIGR00939 128 FGLAG-VFPSTYSS 140 (437)
T ss_pred hhhcc-cCCHHHHH
Confidence 35544 56766543
No 294
>KOG1237|consensus
Probab=86.61 E-value=16 Score=35.86 Aligned_cols=143 Identities=14% Similarity=0.143 Sum_probs=82.7
Q ss_pred hhhHHHhHHHHHHhh-CC-cchHHHHHHHHHHHHHHHHHHHHHhhhcc-CchhhHhhhccc------------------h
Q psy6665 223 IYITIFYAVQFLEDM-GS-RMNVYLATVLVGVVRMVFGLLTSQLLRTY-GRRSLTMFSQIE------------------K 281 (420)
Q Consensus 223 ~~~~~~~~~~~~~~~-g~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~------------------~ 281 (420)
++.+..-+..|+... +. ...+...............+++++++|.+ ||-+++.++.++ .
T Consensus 53 ~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 53 FFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred HhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 333333334444333 54 44555556666666777788999999986 776666666555 0
Q ss_pred ---------------h--HHHHHHHHHHHHH-HhhchhhHHHHHhcccCC----hhhh--hhhHHHHHHHHHHHHHHHHH
Q psy6665 282 ---------------S--LIPVFCILFYVAI-SVIGMLSIPWTMTAEIFP----LEIR--GIAQGLTFCLAHILMFFALQ 337 (420)
Q Consensus 282 ---------------~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p----~~~r--~~~~g~~~~~~~~~~~~~~~ 337 (420)
. ...++...+.... ...+.-|...++-+|-++ .+.+ ...+....+..+.|..++..
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 0 0011111111111 222334455567777776 2223 36677888888888888888
Q ss_pred HhHHHHHhcCcchHHHHHHHHHHHHHHHH
Q psy6665 338 YYPWFKDSVGGSAMVQWFFALISVISIVY 366 (420)
Q Consensus 338 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 366 (420)
+.-++-++.| |...+.+..++..++.++
T Consensus 213 ~~vyiq~~~~-w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 213 VLVYIQDNVG-WKLGFGIPTVLNALAILI 240 (571)
T ss_pred HHHhhhhccc-ceeeccHHHHHHHHHHHH
Confidence 8877767777 766666666655555544
No 295
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.32 E-value=4 Score=29.22 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHh-hcchhHHHHhhHHHHHH
Q psy6665 16 VVRMVFGLLTSQLLRT-YGRRSLTMFSGLGMAVC 48 (420)
Q Consensus 16 ~~g~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~ 48 (420)
.-|.++|..+||+.|| +|-+|+.++..++.+.+
T Consensus 53 IsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 4455556555999999 56788777665554443
No 296
>KOG3574|consensus
Probab=80.98 E-value=20 Score=32.95 Aligned_cols=34 Identities=12% Similarity=0.005 Sum_probs=20.4
Q ss_pred HHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHh
Q psy6665 306 TMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYY 339 (420)
Q Consensus 306 ~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 339 (420)
.+.-.+..+++.|-+..........|.+++-.++
T Consensus 156 gwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 156 GWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 4455566667667666666666666666654443
No 297
>KOG1479|consensus
Probab=80.14 E-value=51 Score=30.63 Aligned_cols=35 Identities=9% Similarity=-0.067 Sum_probs=19.8
Q ss_pred hhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHHH
Q psy6665 301 LSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFA 335 (420)
Q Consensus 301 ~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~ 335 (420)
..+...+..+.+|++++-.+-.+....-..|-+.|
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G 395 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALG 395 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHh
Confidence 45555777888887776554444444433443343
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=76.37 E-value=5.5 Score=37.71 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=18.3
Q ss_pred HhcccCChhhhhhhHHHHHHHHHHHHHHHHHHh
Q psy6665 307 MTAEIFPLEIRGIAQGLTFCLAHILMFFALQYY 339 (420)
Q Consensus 307 ~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~ 339 (420)
++-.+..+++++-+........++|.+++-.++
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvF 174 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVF 174 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHH
Confidence 333455666666666555555556666554444
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.11 E-value=5.1 Score=28.67 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=36.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHhcC-cchHHHHHHHHHHHHHHHH
Q psy6665 314 LEIRGIAQGLTFCLAHILMFFALQYYPWFKDSVG-GSAMVQWFFALISVISIVY 366 (420)
Q Consensus 314 ~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 366 (420)
++.++.+.++-...-.+++.+.....||+.|++- +..+.++++.++.+.+.+.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 4567888888888888999988888899999864 2234444444555444443
No 300
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=68.02 E-value=56 Score=25.56 Aligned_cols=90 Identities=10% Similarity=0.122 Sum_probs=50.5
Q ss_pred HHHHHhhcchhHHHHhhHHHHHHHHHHHHhHHHHHhhcccc---ccchhHHHHHHHHHHhhcccchhhhhhhhhccCccc
Q psy6665 26 SQLLRTYGRRSLTMFSGLGMAVCMTTSGYYTQLIMTGQIEK---SLIPVFCILFYVAISVIAMGPSPAIVYITEVARPDL 102 (420)
Q Consensus 26 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~---~~~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~ 102 (420)
-.++||.-||-.+.. .+-.+++...+... .++..+... .|+.++..+.+.|+|.- .. .|.+++--+++++
T Consensus 55 ~~Vs~RM~rRm~~~~-GiP~~lG~~~f~~~--y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---Gi-sYGilSaSWD~~r 127 (153)
T PF11947_consen 55 EVVSNRMLRRMAVFV-GIPTALGVAVFVVF--YYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GI-SYGILSASWDPER 127 (153)
T ss_pred HHHHHHHHHHHHHHh-chHHHHHHHHHHHH--HHHHhccccccCchHHHHHHHHHHHHHHH---hh-hhhhcccccCCCC
Confidence 467888876654444 33444443333322 122223222 33333333444444444 22 5556777778888
Q ss_pred hhhhHhHHHHHHHHHHHHHH
Q psy6665 103 RGALICIGPSITSLGMVIVY 122 (420)
Q Consensus 103 r~~~~~~~~~~~~lG~~~~~ 122 (420)
-|..+|+-..-.+++.+.-.
T Consensus 128 ~GSllG~~e~~~N~~r~~~a 147 (153)
T PF11947_consen 128 EGSLLGWEEFKRNWGRMWEA 147 (153)
T ss_pred CCCcccHHHHHHhHHHHHHH
Confidence 89999999888888776543
No 301
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=67.38 E-value=21 Score=33.05 Aligned_cols=12 Identities=0% Similarity=-0.227 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q psy6665 327 LAHILMFFALQY 338 (420)
Q Consensus 327 ~~~~~~~~~~~~ 338 (420)
..+.+..--|.+
T Consensus 103 ~~N~~~lglpi~ 114 (385)
T PF03547_consen 103 FGNTGFLGLPIL 114 (385)
T ss_pred CCcchhhHHHHH
Confidence 344444434433
No 302
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=64.63 E-value=31 Score=21.38 Aligned_cols=37 Identities=11% Similarity=0.138 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHH
Q psy6665 11 TVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAV 47 (420)
Q Consensus 11 ~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~ 47 (420)
.+...++..++.... |+..|+ +|.++...+..++.++
T Consensus 5 ~lg~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 5 QLGFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 345556666666666 888886 7776666655444444
No 303
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=62.61 E-value=52 Score=23.60 Aligned_cols=37 Identities=14% Similarity=-0.070 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHH
Q psy6665 11 TVLVGVVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAV 47 (420)
Q Consensus 11 ~~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~ 47 (420)
+++..++...+...+ |...|+ +|-++.+.+..++.++
T Consensus 47 ~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 47 LIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 344445555555566 888885 7766655554444433
No 304
>KOG3880|consensus
Probab=61.32 E-value=6.6 Score=34.69 Aligned_cols=65 Identities=15% Similarity=0.161 Sum_probs=39.8
Q ss_pred HHHHH-HHHHHh--hcchhHHHHhhHHHHHHHHHHHHh--HHHHHhhccccccchhHHHHHHHHHHhhcccchhhhhhhh
Q psy6665 21 FGLLT-SQLLRT--YGRRSLTMFSGLGMAVCMTTSGYY--TQLIMTGQIEKSLIPVFCILFYVAISVIAMGPSPAIVYIT 95 (420)
Q Consensus 21 ~~~~~-g~l~dr--~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~i~ 95 (420)
+--+. ..+.|| ||.|. .+..++.+.+.++.+++ .++-+.+- .+..++.| .... ...-++
T Consensus 77 ~iKl~~Pff~~rfpf~~Ri--~~~v~~sa~s~~lVafs~s~~~sL~GV------------~~aSissG-lGEi-TFL~ls 140 (409)
T KOG3880|consen 77 AIKLTAPFFIHRFPFGFRI--ALVVLLSALSFFLVAFSNSVPMSLLGV------------VFASISSG-LGEI-TFLALS 140 (409)
T ss_pred HHHHhchhhhhhcccchHH--HHHHHHHhcceEEEEeccchhHHHhhh------------hhhhhcCC-ccee-ehhhhh
Confidence 33444 566676 45554 34445566666666666 66667777 77778888 7777 455555
Q ss_pred hccCcc
Q psy6665 96 EVARPD 101 (420)
Q Consensus 96 e~~~~~ 101 (420)
..+|+.
T Consensus 141 s~Y~~~ 146 (409)
T KOG3880|consen 141 SRYPSI 146 (409)
T ss_pred ccCCCc
Confidence 555543
No 305
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=57.16 E-value=93 Score=26.98 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHH-HHHHHh-hcchhHHH
Q psy6665 12 VLVGVVRMVFGLLT-SQLLRT-YGRRSLTM 39 (420)
Q Consensus 12 ~~~~~~g~~~~~~~-g~l~dr-~Grr~~l~ 39 (420)
..++..|..+|... |.+... +-||+.+.
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 34566666777777 888875 55555444
No 306
>KOG3880|consensus
Probab=55.96 E-value=38 Score=30.20 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhhhh
Q psy6665 70 PVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGAVL 128 (420)
Q Consensus 70 ~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~~~ 128 (420)
.++.+++.-|+-.| ...+..+--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 344 ivf~lI~~EGLlGG-asYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 344 IVFALILFEGLLGG-ASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHhhcCc-hHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 33345688888777 66665666677778889999999999999999999999887665
No 307
>KOG2601|consensus
Probab=55.73 E-value=1.7e+02 Score=27.09 Aligned_cols=45 Identities=11% Similarity=-0.076 Sum_probs=28.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHH
Q psy6665 318 GIAQGLTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVIS 363 (420)
Q Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 363 (420)
....+.....-.....++|.+.|.+....+ ....-.++++...+.
T Consensus 174 t~mnatir~iDq~tn~Lapv~tg~Iitfvs-l~~~~g~f~~w~~vs 218 (503)
T KOG2601|consen 174 TNMNATIRGIDQSTNLLAPVITGLIITFVS-LRASAGTFAAWALVS 218 (503)
T ss_pred hhcchhhhhhhhhhhchhhhhhcccceeec-hhhhhhhhHHHHHHH
Confidence 333455555556677899999999888766 555555555555443
No 308
>COG1422 Predicted membrane protein [Function unknown]
Probab=52.70 E-value=1.3e+02 Score=24.71 Aligned_cols=25 Identities=20% Similarity=0.097 Sum_probs=10.7
Q ss_pred HHHHHHHHHhhhhhhHHHHHhHhhhc
Q psy6665 116 LGMVIVYALGAVLHWRTVAWLSLAYI 141 (420)
Q Consensus 116 lG~~~~~~~~~~~~wr~~f~~~~~~~ 141 (420)
+...++|.+.. .+..+..++.+++.
T Consensus 33 ln~~f~P~i~~-~~p~lvilV~avi~ 57 (201)
T COG1422 33 LNVVFGPLLSP-LPPHLVILVAAVIT 57 (201)
T ss_pred HHHHHhhhccc-cccHHHHHHHHHHH
Confidence 34444444444 23444444444443
No 309
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=51.59 E-value=45 Score=28.73 Aligned_cols=21 Identities=19% Similarity=0.205 Sum_probs=11.8
Q ss_pred hhhhhhHHHHHHHHHHHHHHH
Q psy6665 315 EIRGIAQGLTFCLAHILMFFA 335 (420)
Q Consensus 315 ~~r~~~~g~~~~~~~~~~~~~ 335 (420)
-.|..+.|+...+....+.+.
T Consensus 75 ii~~iGLglg~liW~s~n~l~ 95 (254)
T PF07857_consen 75 IIKTIGLGLGMLIWGSVNCLT 95 (254)
T ss_pred HhhhhhhHHHHHHHHHHHHHH
Confidence 345555666666665555554
No 310
>KOG2881|consensus
Probab=47.72 E-value=1.8e+02 Score=25.05 Aligned_cols=27 Identities=11% Similarity=0.053 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHhhhccCchhhHhhhc
Q psy6665 252 VVRMVFGLLTSQLLRTYGRRSLTMFSQ 278 (420)
Q Consensus 252 ~~~~~~~~~~g~l~d~~g~~~~~~~~~ 278 (420)
++..+..+-+-+++.|+..|.+.+.+.
T Consensus 251 lCT~lAVigGk~lAskIS~rtVt~~gg 277 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVRTVTLIGG 277 (294)
T ss_pred HHHHHHHhhhHHHhhhheeEEEEEecc
Confidence 344444444556778888877666554
No 311
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.60 E-value=81 Score=25.65 Aligned_cols=22 Identities=5% Similarity=0.018 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHH-HHHHHhhcc
Q psy6665 13 LVGVVRMVFGLLT-SQLLRTYGR 34 (420)
Q Consensus 13 ~~~~~g~~~~~~~-g~l~dr~Gr 34 (420)
.-|.+++.+++.+ |++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 3468889999999 999999886
No 312
>KOG4112|consensus
Probab=42.04 E-value=61 Score=22.64 Aligned_cols=42 Identities=7% Similarity=0.127 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHhh
Q psy6665 323 LTFCLAHILMFFALQYYPWFKDSVGGSAMVQWFFALISVISIVYVY 368 (420)
Q Consensus 323 ~~~~~~~~~~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 368 (420)
+...+-.++++++ ++.|+..+.++ ....++++.+++.+++.+
T Consensus 27 ~~q~ilti~aiVg-~i~Gf~~Qqls---~tvy~vg~~~v~t~li~L 68 (101)
T KOG4112|consen 27 FQQLILTIGAIVG-FIYGFAQQQLS---VTVYIVGAGFVFTLLITL 68 (101)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHH---HHHHHHHHHHHHHHHhcC
Confidence 3344444444443 45577777766 444455555555555543
No 313
>PRK10692 hypothetical protein; Provisional
Probab=41.48 E-value=76 Score=21.83 Aligned_cols=22 Identities=9% Similarity=0.141 Sum_probs=17.9
Q ss_pred chhHHHHhhHHHHHHHHHHHHh
Q psy6665 34 RRSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 34 rr~~l~~~~~~~~~~~~~~~~~ 55 (420)
||...++|.++++++.+.+...
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~g 24 (92)
T PRK10692 3 RKNASLLGNVLMGLGLVVMVVG 24 (92)
T ss_pred chhhHHHhhHHHHHHHHHHHHH
Confidence 7888888999998888877654
No 314
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=40.17 E-value=11 Score=33.82 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=3.4
Q ss_pred chhHHHHHHHHHHhhcccchhhhhhhhhccCccchhhhHhHHHHHHHHHHHHHHHHhh
Q psy6665 69 IPVFCILFYVAISVIAMGPSPAIVYITEVARPDLRGALICIGPSITSLGMVIVYALGA 126 (420)
Q Consensus 69 ~~~~~~~~l~G~~~~~~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~lG~~~~~~~~~ 126 (420)
+..+.+-++.|+..| .....+..+..+..++++|..+..+......+|..+|..++.
T Consensus 249 ~~~~i~~~l~g~TNG-yl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 249 AWFIILMLLFGFTNG-YLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -------------------HHHH-----------------------------------
T ss_pred HHHHHHHHHHHHccc-hhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444588999999 888878999999999999999988888888888888876653
No 315
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=39.64 E-value=1.3e+02 Score=23.49 Aligned_cols=38 Identities=16% Similarity=0.032 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHH-HHHHHhhcchhHHHHhhHHHHHHHHH
Q psy6665 14 VGVVRMVFGLLT-SQLLRTYGRRSLTMFSGLGMAVCMTT 51 (420)
Q Consensus 14 ~~~~g~~~~~~~-g~l~dr~Grr~~l~~~~~~~~~~~~~ 51 (420)
-|.+|+.+++.. |++.+|..+++..........++.+.
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 467888899999 99999998864333333333333333
No 316
>KOG0055|consensus
Probab=38.93 E-value=4.3e+02 Score=28.79 Aligned_cols=18 Identities=17% Similarity=0.397 Sum_probs=12.9
Q ss_pred hhhhHHHHHhHhhhcccc
Q psy6665 127 VLHWRTVAWLSLAYILIP 144 (420)
Q Consensus 127 ~~~wr~~f~~~~~~~~~~ 144 (420)
..+||......+..-++.
T Consensus 805 ~~~W~lalv~la~~Pll~ 822 (1228)
T KOG0055|consen 805 IYGWRLALVVLATFPLLI 822 (1228)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 339999888777665554
No 317
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.75 E-value=51 Score=25.79 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=29.6
Q ss_pred HHHHhhchhhHHHHHhcccCChhhhhhhHHHHHHHHHHHHHH
Q psy6665 293 VAISVIGMLSIPWTMTAEIFPLEIRGIAQGLTFCLAHILMFF 334 (420)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~ 334 (420)
..+|+.+...+.|...+-.-.++..|+..|+-.+-.+++...
T Consensus 104 ~~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 104 LVFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 334444555566766777777787899999998888876654
No 318
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=34.38 E-value=1e+02 Score=23.61 Aligned_cols=27 Identities=15% Similarity=0.185 Sum_probs=19.3
Q ss_pred HhcccCChhhhhhhHHHHHHHHHHHHH
Q psy6665 307 MTAEIFPLEIRGIAQGLTFCLAHILMF 333 (420)
Q Consensus 307 ~~~~~~p~~~r~~~~g~~~~~~~~~~~ 333 (420)
-+.|++|+..|..+.+..+........
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 347999999998887777665544433
No 319
>COG4769 Predicted membrane protein [Function unknown]
Probab=34.27 E-value=1.6e+02 Score=23.40 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHhhH
Q psy6665 14 VGVVRMVFGLLTSQLLRTYGRRSLTMFSGL 43 (420)
Q Consensus 14 ~~~~g~~~~~~~g~l~dr~Grr~~l~~~~~ 43 (420)
..+.|...+.+.-++..++|.|.+=.+|..
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS 111 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGIS 111 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehh
Confidence 344555555555888899998877444433
No 320
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=33.41 E-value=1e+02 Score=21.08 Aligned_cols=22 Identities=14% Similarity=0.064 Sum_probs=17.5
Q ss_pred chhHHHHhhHHHHHHHHHHHHh
Q psy6665 34 RRSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 34 rr~~l~~~~~~~~~~~~~~~~~ 55 (420)
||...++|..+++++.+.+...
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~g 24 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVMVGG 24 (89)
T ss_pred chhhHHHhhHHHHHhHHHHHHh
Confidence 7788888888888888776554
No 321
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=32.12 E-value=87 Score=21.15 Aligned_cols=32 Identities=9% Similarity=0.152 Sum_probs=18.5
Q ss_pred HHHHHHhHHHHHhcCcchHHHHHHHHHHHHHHHHh
Q psy6665 333 FFALQYYPWFKDSVGGSAMVQWFFALISVISIVYV 367 (420)
Q Consensus 333 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 367 (420)
++..++.|++.+... ..+.++++..+++++++
T Consensus 21 ~iisfi~Gy~~q~~~---~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 21 AIISFIVGYITQSFS---YTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhe
Confidence 344456688777644 55556655555555543
No 322
>KOG3810|consensus
Probab=27.76 E-value=2.1e+02 Score=26.27 Aligned_cols=43 Identities=7% Similarity=-0.077 Sum_probs=32.6
Q ss_pred HHHHHhcccCChhhhhhhHHHHHHHHHHHHHHHHHHhHHHHHh
Q psy6665 303 IPWTMTAEIFPLEIRGIAQGLTFCLAHILMFFALQYYPWFKDS 345 (420)
Q Consensus 303 ~~~~~~~~~~p~~~r~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 345 (420)
..++++-+..+++++.++.|.+....-.|...+..+.-.+.+.
T Consensus 114 AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~ 156 (433)
T KOG3810|consen 114 AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSL 156 (433)
T ss_pred hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhh
Confidence 3446667778999999999999988888887777776665543
No 323
>PF11283 DUF3084: Protein of unknown function (DUF3084); InterPro: IPR021435 This bacterial family of proteins has no known function.
Probab=26.16 E-value=1.6e+02 Score=19.95 Aligned_cols=32 Identities=13% Similarity=0.295 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchhHHHHh
Q psy6665 10 ATVLVGVVRMVFGLLTSQLLRTYGRRSLTMFS 41 (420)
Q Consensus 10 ~~~~~~~~g~~~~~~~g~l~dr~Grr~~l~~~ 41 (420)
+...+-.+|..++.+.-.+..|.|+|+.=+++
T Consensus 5 li~~l~~lgG~IA~~GD~iG~kvGKkrlslFg 36 (79)
T PF11283_consen 5 LILALLLLGGLIAYLGDRIGSKVGKKRLSLFG 36 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Confidence 33334444444332224444456666654443
No 324
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=26.06 E-value=6.3e+02 Score=24.72 Aligned_cols=26 Identities=19% Similarity=0.595 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCch
Q psy6665 246 ATVLVGVVRMVFGLLTSQLLRTYGRR 271 (420)
Q Consensus 246 ~~~~~~~~~~~~~~~~g~l~d~~g~~ 271 (420)
......+.+.+++..++.+-..++.+
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCCC
Confidence 34444555666666666666666544
No 325
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=25.40 E-value=1.3e+02 Score=23.10 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=21.3
Q ss_pred hhhhccCccchhhhHhHHHHHHHHHHHHH
Q psy6665 93 YITEVARPDLRGALICIGPSITSLGMVIV 121 (420)
Q Consensus 93 ~i~e~~~~~~r~~~~~~~~~~~~lG~~~~ 121 (420)
-+.|++|+..|..+.+..........-..
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~~ 87 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSLF 87 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999999988888776665544333
No 326
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.00 E-value=89 Score=18.81 Aligned_cols=9 Identities=11% Similarity=0.715 Sum_probs=3.7
Q ss_pred HHhhhcccc
Q psy6665 365 VYVYIFLPE 373 (420)
Q Consensus 365 ~~~~~~~~~ 373 (420)
++.+.+.|+
T Consensus 25 i~~w~~~~~ 33 (49)
T PF05545_consen 25 IVIWAYRPR 33 (49)
T ss_pred HHHHHHccc
Confidence 334444443
No 327
>PRK14397 membrane protein; Provisional
Probab=23.29 E-value=2.5e+02 Score=23.75 Aligned_cols=6 Identities=17% Similarity=0.124 Sum_probs=2.4
Q ss_pred HHHHHh
Q psy6665 381 EIEEYF 386 (420)
Q Consensus 381 ~~~~~~ 386 (420)
++.+..
T Consensus 179 NI~RL~ 184 (222)
T PRK14397 179 NIGRLA 184 (222)
T ss_pred HHHHHH
Confidence 344443
No 328
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=23.20 E-value=2e+02 Score=22.25 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=18.1
Q ss_pred HhcccCChhhhhhhHHHHHHHHHHH
Q psy6665 307 MTAEIFPLEIRGIAQGLTFCLAHIL 331 (420)
Q Consensus 307 ~~~~~~p~~~r~~~~g~~~~~~~~~ 331 (420)
-+.|++|+..|..+....+......
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~ 81 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFV 81 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 3579999999988777666655443
No 329
>PHA03231 glycoprotein BALF4; Provisional
Probab=23.16 E-value=68 Score=32.77 Aligned_cols=23 Identities=0% Similarity=-0.175 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHH
Q psy6665 321 QGLTFCLAHILMFFALQYYPWFK 343 (420)
Q Consensus 321 ~g~~~~~~~~~~~~~~~~~g~l~ 343 (420)
-++.+.+..++++++..+.|.+.
T Consensus 676 k~vg~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 676 KAVGNVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHH
Confidence 34555566666666666666543
No 330
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.83 E-value=1.9e+02 Score=21.74 Aligned_cols=8 Identities=13% Similarity=0.214 Sum_probs=3.0
Q ss_pred HHHHHhhc
Q psy6665 26 SQLLRTYG 33 (420)
Q Consensus 26 g~l~dr~G 33 (420)
|++.-|++
T Consensus 22 G~li~Rlt 29 (138)
T COG3105 22 GALIARLT 29 (138)
T ss_pred HHHHHHHc
Confidence 33333333
No 331
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=22.69 E-value=1.3e+02 Score=21.38 Aligned_cols=22 Identities=18% Similarity=0.262 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHH-HHHHHhhcch
Q psy6665 14 VGVVRMVFGLLT-SQLLRTYGRR 35 (420)
Q Consensus 14 ~~~~g~~~~~~~-g~l~dr~Grr 35 (420)
.....+.+-++. |.+.||..||
T Consensus 83 ~~~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 83 ITFAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 344555556667 9999998775
No 332
>KOG3097|consensus
Probab=22.59 E-value=4.9e+02 Score=23.79 Aligned_cols=30 Identities=10% Similarity=0.132 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhhhccCchhhHhhhccc
Q psy6665 251 GVVRMVFGLLTSQLLRTYGRRSLTMFSQIE 280 (420)
Q Consensus 251 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 280 (420)
.+.-+..+++.+.+.+++|-|.++.++...
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~ 97 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFP 97 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 344455666666899999999999888776
No 333
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=22.20 E-value=1e+02 Score=19.66 Aligned_cols=10 Identities=20% Similarity=0.673 Sum_probs=4.3
Q ss_pred hhhccccCCC
Q psy6665 367 VYIFLPETHG 376 (420)
Q Consensus 367 ~~~~~~~~~~ 376 (420)
.+.+.|+.|+
T Consensus 27 ~~ayr~~~K~ 36 (60)
T COG4736 27 YFAYRPGKKG 36 (60)
T ss_pred HHHhcccchh
Confidence 3344454443
No 334
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=21.40 E-value=2.1e+02 Score=26.45 Aligned_cols=11 Identities=27% Similarity=0.452 Sum_probs=5.3
Q ss_pred hHHHHHhcccC
Q psy6665 302 SIPWTMTAEIF 312 (420)
Q Consensus 302 ~~~~~~~~~~~ 312 (420)
++.+..+.|.+
T Consensus 253 ~ii~~i~~E~~ 263 (374)
T PF01528_consen 253 SIIYLIVIEVV 263 (374)
T ss_pred HHHHHHHHHHH
Confidence 34445555554
No 335
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=21.33 E-value=7.2e+02 Score=23.71 Aligned_cols=36 Identities=19% Similarity=0.343 Sum_probs=23.1
Q ss_pred CCcchHHHHHHHHHHHHHHHHHH---------HHHhhhccCchhh
Q psy6665 238 GSRMNVYLATVLVGVVRMVFGLL---------TSQLLRTYGRRSL 273 (420)
Q Consensus 238 g~~~~~~~~~~~~~~~~~~~~~~---------~g~l~d~~g~~~~ 273 (420)
|+....+....+..++.++|.++ .-.+.+++|+|+.
T Consensus 53 GfG~tl~~igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~ 97 (441)
T PF02447_consen 53 GFGSTLGSIGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRA 97 (441)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCcc
Confidence 55455556666667777777764 3445677887765
No 336
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=20.78 E-value=3.3e+02 Score=19.49 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=29.0
Q ss_pred HHHHHHHHHH-HHHHHh-hcchhHHHHhhHHHHHHHHHHHHh
Q psy6665 16 VVRMVFGLLT-SQLLRT-YGRRSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 16 ~~g~~~~~~~-g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~ 55 (420)
.+...+..+. |+..+| +|.|..+..-.+...+.+++..+.
T Consensus 24 ~l~~~~~l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl~~~~~ 65 (99)
T PF08551_consen 24 LLFSLLTLFYGGRYLEPIWGSREFLKFILVVNVITNLLTFLL 65 (99)
T ss_pred HHHHHHHHHHhhHHHHHhcChHHHHHHHHHHHHHhHHHHHHH
Confidence 3344444556 888887 999999988888888777776655
No 337
>PF10066 DUF2304: Uncharacterized conserved protein (DUF2304); InterPro: IPR019277 This entry represents hypothetical archaeal and bacterial proteins that have no known function.
Probab=20.46 E-value=1.9e+02 Score=21.28 Aligned_cols=25 Identities=16% Similarity=0.444 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhcC
Q psy6665 323 LTFCLAHILMFFALQYYPWFKDSVG 347 (420)
Q Consensus 323 ~~~~~~~~~~~~~~~~~g~l~~~~g 347 (420)
+......+...+-|.+...+.+..|
T Consensus 37 l~~~i~~l~~~ifP~~~~~vA~~lG 61 (115)
T PF10066_consen 37 LVFSIILLILSIFPNILDWVAKLLG 61 (115)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHC
Confidence 3333444455567777777777777
No 338
>COG5547 Small integral membrane protein [Function unknown]
Probab=20.05 E-value=2.4e+02 Score=17.73 Aligned_cols=21 Identities=5% Similarity=0.055 Sum_probs=12.0
Q ss_pred hhHHHHhhHHHHHHHHHHHHh
Q psy6665 35 RSLTMFSGLGMAVCMTTSGYY 55 (420)
Q Consensus 35 r~~l~~~~~~~~~~~~~~~~~ 55 (420)
|..++.+++...++.+...+.
T Consensus 8 kypIIgglvglliAili~t~G 28 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFG 28 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHH
Confidence 445555666666665555555
Done!