Query psy6666
Match_columns 175
No_of_seqs 59 out of 61
Neff 3.4
Searched_HMMs 13730
Date Sat Aug 17 00:01:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6666.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6666hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2yw6a1 a.25.1.1 (A:17-157) Do 17.7 3.6 0.00026 28.4 -3.0 15 39-53 15-29 (141)
2 d1jiga_ a.25.1.1 (A:) Dodecame 13.6 5.4 0.00039 27.5 -3.0 15 39-53 20-34 (146)
3 d1dpsa_ a.25.1.1 (A:) Dodecame 13.0 6.4 0.00047 27.9 -2.8 15 39-53 35-49 (159)
4 d2bk6a1 a.25.1.1 (A:7-156) Dod 12.8 5.9 0.00043 27.4 -3.0 15 39-53 17-31 (150)
5 d1ji4a_ a.25.1.1 (A:) Dodecame 12.5 6 0.00044 27.3 -3.0 15 39-53 17-31 (144)
6 d1zuja1 a.25.1.1 (A:6-173) Dod 12.2 6.2 0.00045 29.1 -3.2 16 38-53 35-50 (168)
7 d2fjca1 a.25.1.1 (A:27-177) Do 12.1 6.3 0.00046 27.3 -3.0 15 39-53 23-37 (151)
8 d1n1qa_ a.25.1.1 (A:) Dodecame 10.9 7.4 0.00054 26.9 -3.0 15 39-53 23-37 (149)
9 d1zs3a1 a.25.1.1 (A:3-173) Dod 10.6 7.6 0.00055 28.8 -3.2 16 38-53 38-53 (171)
10 d1tjoa_ a.25.1.1 (A:) Dodecame 10.5 7.7 0.00056 27.9 -3.1 14 39-52 43-56 (180)
No 1
>d2yw6a1 a.25.1.1 (A:17-157) Dodecameric ferritin homolog {Mycobacterium smegmatis [TaxId: 1772]}
Probab=17.71 E-value=3.6 Score=28.37 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=11.4
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
=|..++.|||||++.
T Consensus 15 L~~~~~~~HWnv~G~ 29 (141)
T d2yw6a1 15 LHLTLKHVHWNVVGP 29 (141)
T ss_dssp HHHHHHHHHHHEEST
T ss_pred HHHHHHhccccccCC
Confidence 356678899999764
No 2
>d1jiga_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus anthracis, Dlp-2 [TaxId: 1392]}
Probab=13.63 E-value=5.4 Score=27.48 Aligned_cols=15 Identities=27% Similarity=0.607 Sum_probs=11.4
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
-|.-++.|||||++.
T Consensus 20 l~~k~~~~HWnv~G~ 34 (146)
T d1jiga_ 20 LYVKLHNYHWYVTGP 34 (146)
T ss_dssp HHHHHHHHHHHCCST
T ss_pred HHHHHHhhhhheeCC
Confidence 466678899999764
No 3
>d1dpsa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Escherichia coli, Dps [TaxId: 562]}
Probab=12.96 E-value=6.4 Score=27.87 Aligned_cols=15 Identities=13% Similarity=0.490 Sum_probs=11.9
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
=|..++.|||||++.
T Consensus 35 L~~~~~~~HWnv~G~ 49 (159)
T d1dpsa_ 35 LSLITKQAHWNMRGA 49 (159)
T ss_dssp HHHHHHHHHHTCBST
T ss_pred HHHHHHhhhcceeCC
Confidence 466788899999764
No 4
>d2bk6a1 a.25.1.1 (A:7-156) Dodecameric ferritin homolog {Listeria innocua [TaxId: 1642]}
Probab=12.76 E-value=5.9 Score=27.37 Aligned_cols=15 Identities=7% Similarity=0.233 Sum_probs=11.3
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
-|.-++.|||||++.
T Consensus 17 l~~k~~~~HWnv~G~ 31 (150)
T d2bk6a1 17 FTVKIHQIGWYMRGH 31 (150)
T ss_dssp HHHHHHHHHHHCCST
T ss_pred HHHHHHhhhhheeCC
Confidence 455677899999763
No 5
>d1ji4a_ a.25.1.1 (A:) Dodecameric ferritin homolog {Helicobacter pylori, Nap [TaxId: 210]}
Probab=12.46 E-value=6 Score=27.29 Aligned_cols=15 Identities=27% Similarity=0.722 Sum_probs=11.2
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
-|.-++.|||||++.
T Consensus 17 l~~~~~~~HWnv~G~ 31 (144)
T d1ji4a_ 17 LFMKVHNFHWNVKGT 31 (144)
T ss_dssp HHHHHHHHHHHEEST
T ss_pred HHHHHhhhccceeCC
Confidence 456678899999764
No 6
>d1zuja1 a.25.1.1 (A:6-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsA [TaxId: 1358]}
Probab=12.17 E-value=6.2 Score=29.05 Aligned_cols=16 Identities=25% Similarity=0.123 Sum_probs=13.2
Q ss_pred ccceEEEeeeeecccc
Q psy6666 38 YEYKMAREYNWNVKSK 53 (175)
Q Consensus 38 yeYk~~REYnW~Vk~k 53 (175)
.-|-.++.|||||++.
T Consensus 35 vl~~K~~~~HWnV~G~ 50 (168)
T d1zuja1 35 YEKISLMQAGLYAKSA 50 (168)
T ss_dssp HHHHHHHHHHHHCSSH
T ss_pred HHHHHHHcceeeeeCc
Confidence 4788889999999863
No 7
>d2fjca1 a.25.1.1 (A:27-177) Dodecameric ferritin homolog {Treponema pallidum, TpF1 [TaxId: 160]}
Probab=12.09 E-value=6.3 Score=27.25 Aligned_cols=15 Identities=20% Similarity=0.567 Sum_probs=11.7
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
-|.-++.|||||++.
T Consensus 23 l~~k~~~~HWnv~G~ 37 (151)
T d2fjca1 23 LYIKLHNYHWHIYGI 37 (151)
T ss_dssp HHHHHHHHHHHEEST
T ss_pred HHHHHHhhheeeeCC
Confidence 566678899999864
No 8
>d1n1qa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Bacillus brevis, Dps [TaxId: 1393]}
Probab=10.91 E-value=7.4 Score=26.88 Aligned_cols=15 Identities=27% Similarity=0.678 Sum_probs=11.2
Q ss_pred cceEEEeeeeecccc
Q psy6666 39 EYKMAREYNWNVKSK 53 (175)
Q Consensus 39 eYk~~REYnW~Vk~k 53 (175)
=|.-++-|||||++.
T Consensus 23 l~~~~~~~HWnv~G~ 37 (149)
T d1n1qa_ 23 LYVKLHNFHWNVNGP 37 (149)
T ss_dssp HHHHHHHHHHHCCST
T ss_pred HHHHHhhhhhceeCC
Confidence 455678899999763
No 9
>d1zs3a1 a.25.1.1 (A:3-173) Dodecameric ferritin homolog {Lactococcus lactis, DpsB [TaxId: 1358]}
Probab=10.59 E-value=7.6 Score=28.84 Aligned_cols=16 Identities=19% Similarity=-0.041 Sum_probs=13.1
Q ss_pred ccceEEEeeeeecccc
Q psy6666 38 YEYKMAREYNWNVKSK 53 (175)
Q Consensus 38 yeYk~~REYnW~Vk~k 53 (175)
.-|.-++.|||||++.
T Consensus 38 vl~~K~~~~HWnv~G~ 53 (171)
T d1zs3a1 38 IENIRLTQAGIYAKSP 53 (171)
T ss_dssp HHHHHHHHHHHHCSSH
T ss_pred HHHHHHHcCceeeECh
Confidence 4677889999999874
No 10
>d1tjoa_ a.25.1.1 (A:) Dodecameric ferritin homolog {Archaeon Halobacterium salinarum [TaxId: 2242]}
Probab=10.54 E-value=7.7 Score=27.92 Aligned_cols=14 Identities=29% Similarity=0.698 Sum_probs=11.4
Q ss_pred cceEEEeeeeeccc
Q psy6666 39 EYKMAREYNWNVKS 52 (175)
Q Consensus 39 eYk~~REYnW~Vk~ 52 (175)
-|.-++.|||||++
T Consensus 43 l~~k~~~~HWnv~G 56 (180)
T d1tjoa_ 43 LYHQLKKHHWNVEG 56 (180)
T ss_dssp HHHHHHHHHHHCCS
T ss_pred HHHHHHHhheeeeC
Confidence 56778889999975
Done!