BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6667
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P17220|PSA2_RAT Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1
SV=3
Length = 234
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSG 125
>sp|P49722|PSA2_MOUSE Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=3
Length = 234
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSG 125
>sp|P25787|PSA2_HUMAN Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2
Length = 234
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSG 125
>sp|Q3T0Y5|PSA2_BOVIN Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3
Length = 234
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/111 (80%), Positives = 101/111 (90%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV GAPSVGIKA+NG+VLATEKKQK+IL+ E +HKVEPIT +IG+
Sbjct: 15 PSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGL 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV +ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSG 125
>sp|O73672|PSA2_CARAU Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2
SV=3
Length = 234
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/111 (81%), Positives = 103/111 (92%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV AGAPSVGIKASNG+VLATEKKQK+IL+ E +HK+EPIT +IGM
Sbjct: 15 PSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV++ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSG 125
>sp|P24495|PSA2_XENLA Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2
SV=2
Length = 234
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/111 (81%), Positives = 102/111 (91%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIEYALAAV AGAPSVGIKA+NG+VLATEKKQK+IL+ E HKVEPIT +IGM
Sbjct: 15 PSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV++ARK+AQQY LVYQE IPT QLVQRVA++MQEYTQSG
Sbjct: 75 VYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSG 125
>sp|P40301|PSA2_DROME Proteasome subunit alpha type-2 OS=Drosophila melanogaster
GN=Pros25 PE=1 SV=1
Length = 234
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/111 (72%), Positives = 93/111 (83%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
PSGKLVQ+EYALAAV GAPSVGI ASNG+V+ATE K K+ L+E +H+VE I ++IGM
Sbjct: 15 PSGKLVQLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGM 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYRLLVK+ARKIAQ Y L Y+E IP QLVQRVA +MQEYTQSG
Sbjct: 75 VYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSG 125
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKA+NG+V+ATEKK +IL E + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPD+R+LV+K+RK AQQY +Y+E IP QLV+ AA+MQE+TQSG
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSG 125
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/111 (61%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILF-EDCIHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKA+NG+V+ATEKK +IL E + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPD+R+LV+K+RK AQQY +Y+E IP QLV+ AA+MQE+TQSG
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSG 125
>sp|Q27488|PSA2_CAEEL Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2
PE=1 SV=1
Length = 231
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/110 (62%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDCIHKVEPITDYIGMV 60
PSGKL+QIEYAL AV+ G PSVG++A +G+VLATE ++L +D KVE I+ +IG V
Sbjct: 14 PSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENV-GSVLTDD-QPKVEQISKHIGCV 71
Query: 61 YSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
YSGMGPD+R+LVKKARKIA +Y+++Y E +PT QLV +AA+MQEYTQSG
Sbjct: 72 YSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSG 121
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDC-IHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKASNG+V+ATEKK +IL ++ + K++ +T IG+
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGV 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPD+R+LV+K+RK A+QY +Y+E IP QLV+ A +MQE+TQSG
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 88/111 (79%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDC-IHKVEPITDYIGM 59
PSGKLVQIE+AL AV +G S+GIKASNG+V+ATEKK +IL ++ + K++ +T IG
Sbjct: 15 PSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGT 74
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPD+R+LV+K+RK A+QY +Y+E IP QLV+ A +MQE+TQSG
Sbjct: 75 VYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSG 125
>sp|O94579|PSA2_SCHPO Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre8 PE=3 SV=1
Length = 245
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTIL-FEDCIHKVEPITDYIGM 59
P+GKLVQIEYAL AV AG SVGIKA++G+VLATEKK + L + KV IT IGM
Sbjct: 14 PNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGM 73
Query: 60 VYSGMGPDYRLLVKKARKIAQ-QYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPD+R+LV K+RK+AQ YK +Y E PT+ LVQ +A++MQE TQSG
Sbjct: 74 VYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSG 125
>sp|Q8X077|PSA2_NEUCR Probable proteasome subunit alpha type-2 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=B14D6.510 PE=3 SV=1
Length = 249
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
PSGKLVQIEYAL AV G ++GIKA+NGIVLATEKK + L + + K+ IT IGM
Sbjct: 14 PSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGM 73
Query: 60 VYSGMGPDYRLLVKKARKIAQQ-YKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV +ARK++ YK +Y E PT+ LVQ VA +MQE TQSG
Sbjct: 74 VYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSG 125
>sp|Q54DM7|PSA2_DICDI Proteasome subunit alpha type-2 OS=Dictyostelium discoideum
GN=psmA2 PE=3 SV=1
Length = 232
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 84/110 (76%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDCIHKVEPITDYIGMV 60
PSGKLVQIE+AL A +G ++GIKA NG+VL TEKK +++ + K+ IT+ IG+V
Sbjct: 14 PSGKLVQIEHALQAAASGGSAIGIKAKNGVVLITEKKLHSLVDVTSVQKISMITENIGLV 73
Query: 61 YSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
Y+GMGPD R+L+KKARK +++Y Y+E IP QLV+ +A+IMQE+TQSG
Sbjct: 74 YAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSG 123
>sp|P23639|PSA2_YEAST Proteasome subunit alpha type-2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE8 PE=1 SV=1
Length = 250
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTIL-FEDCIHKVEPITDYIGM 59
PSGKL QI+YAL AV+ G S+GIKA+NG+V+ATEKK + L + + KV +T IG
Sbjct: 14 PSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSETLSKVSLLTPDIGA 73
Query: 60 VYSGMGPDYRLLVKKARKIAQ-QYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
VYSGMGPDYR+LV K+RK+A YK +Y E PT+ LV VA IMQE TQSG
Sbjct: 74 VYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQSG 125
>sp|Q9U793|PSA2_TRYBB Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 231
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 79/111 (71%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
PSG+LVQIEYA A G ++G+KA++G+V+A EKK + L + +HKV + D++G
Sbjct: 13 PSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGC 72
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
YSG+GPD R+LV AR+ Q+Y+L Y E +P QLV++++ + QE+TQSG
Sbjct: 73 TYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSG 123
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ +G+V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G+ ++G+K +NG++L ++KK ++ L E + I K++ I DY+
Sbjct: 17 PDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
V SG+ D R+LV AR AQQ K+ Y + + LV+RVA MQ+YTQ G
Sbjct: 77 VTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYG 127
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G+ ++G+K SNG++L ++KK ++ L E + + K++ I DY+
Sbjct: 17 PDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
V SG+ D R+L+ AR AQQ K+ Y + + LV+RVA MQ+YTQ G
Sbjct: 77 VTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYG 127
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEK-KQKTILFEDCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++GIK+ + +V+A+EK K +++L D I KV I D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR IA Q++L+Y E + L + VA + Q YTQ G
Sbjct: 79 SFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHG 129
>sp|A5UJS2|PSA_METS3 Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1
Length = 250
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G S+GIK S GIVLA +K+ + L E I K+ I ++IG
Sbjct: 18 PDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R LV++AR AQ K+ Y E I L +++ ++Q YTQ+G
Sbjct: 78 ATSGLVADARALVERARVEAQINKITYSEPIRVDSLSKKLCDMLQMYTQNG 128
>sp|Q4JB24|PSA_SULAC Proteasome subunit alpha OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=psmA PE=3 SV=1
Length = 242
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++G+K +G+VL EK++ T L + D I K+ + D++G
Sbjct: 19 PDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR A Q++L+Y E I + L + ++ + Q YTQ G
Sbjct: 79 TFAGLASDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHG 129
>sp|P23638|PSA3_YEAST Proteasome subunit alpha type-3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE9 PE=1 SV=1
Length = 258
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE--DCIHKVEPITDYIG 58
P G+L Q+EYAL ++ ++GI AS+GIVLA E+K + L E K+ + D I
Sbjct: 15 PEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIA 74
Query: 59 MVYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+ +G+ D +L+ AR AQ Y Y E+IP + LV+R++ I Q YTQ G
Sbjct: 75 VAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHG 126
>sp|Q9YC01|PSA_AERPE Proteasome subunit alpha OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=psmA PE=3
SV=1
Length = 258
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G L Q+ YA AV+ G S+GIK + G+V+A EK+ L + D I K+ I D+IG+
Sbjct: 21 PEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGV 80
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++GMG D R+L+ AR +++L+Y E P + + + VA + Q YTQ G
Sbjct: 81 AFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHG 131
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q++YA AV+ GA +VG+K +G+VLA EK+ + L E + K+ I D+I
Sbjct: 19 PDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ G
Sbjct: 79 ASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYG 129
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++G+K G+VL EK++ T L + D I KV + D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR A Q++L+Y E I L + V+ + Q YTQ G
Sbjct: 79 SFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHG 129
>sp|Q09682|PSA3_SCHPO Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC13C5.01c PE=3
SV=1
Length = 248
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE--DCIHKVEPITDYIG 58
P G+L Q+EYAL A+ ++GI A +GIVLA EKK + L E + K+ I D +
Sbjct: 14 PEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNML 73
Query: 59 MVYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+G+ D +L+ AR++ QQY + E +P +QLV+RV + Q YTQ G
Sbjct: 74 CAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGYTQYG 125
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G L Q++YA AV+ G ++G+K N +V+ EKK+ + L + D I KV + D++G
Sbjct: 19 PDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGC 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
++G+ D R+L+ AR + Q++LVY E I L + ++ + Q YTQ G
Sbjct: 79 SFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHG 129
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E D K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E P +V+++ + Q +TQ G
Sbjct: 79 ASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYG 129
>sp|Q95008|PSA5_CAEEL Proteasome subunit alpha type-5 OS=Caenorhabditis elegans GN=pas-5
PE=1 SV=1
Length = 248
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 1/107 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKT-ILFEDCIHKVEPITDYIGM 59
P G+L Q+EYA+ AV+ G+ S+GIK S G++LA EK+ + ++ D I K+ + +IG+
Sbjct: 17 PEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQHIGV 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEY 106
++G+ D R LV++A+ AQ + Y I + + Q VA + ++
Sbjct: 77 TFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQF 123
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFED-CIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G+ ++GIK +G+ L +EKK ++ L E + K++ I D +
Sbjct: 17 PDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
V SG+ D R+L+ AR QQ K+ Y + + LV+RVA MQ+YTQ G
Sbjct: 77 VTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYG 127
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K +G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ G
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K +G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ G
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ GA ++GIK G++L +K+ + L E D I K+ I ++I
Sbjct: 17 PDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICA 76
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+L+ +AR AQ +L Y E I ++L +++ Q+YTQ G
Sbjct: 77 ATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYG 127
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ G
Sbjct: 79 APSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
>sp|P40303|PSA4_YEAST Proteasome subunit alpha type-4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE6 PE=1 SV=1
Length = 254
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFEDCI--HKVEPITDYIG 58
P G + Q+EYAL AV+ G +VG+K N +VL E++ L + I KV I ++
Sbjct: 13 PDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVV 72
Query: 59 MVYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+ +SG+ D R+L++KAR AQ ++L ++ + + L + VA + Q YTQSG
Sbjct: 73 LSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSG 124
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+ YA AV+ GA +VG+K G+VLA EK+ + L E K+ I D+I
Sbjct: 19 PDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+LV +AR AQ Y+L Y E +P LV+++ + Q +TQ G
Sbjct: 79 APSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYG 129
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G +VGIK ++GIVL +K+ + L E I K+ I ++IG+
Sbjct: 18 PDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGV 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R LV +AR +Q ++ Y E I + L +++ MQ YTQ G
Sbjct: 78 ASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQFG 128
>sp|Q18K08|PSA_HALWD Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM
16790) GN=psmA PE=3 SV=1
Length = 250
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G SVGI+ +GIVLA +K+ ++ L E + K+ D++G+
Sbjct: 19 PDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGI 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+G D R L+ AR+ AQ +L Y E + + L + V +Q+YTQ G
Sbjct: 79 ASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVG 129
>sp|Q8ZVM1|PSA_PYRAE Proteasome subunit alpha OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=psmA
PE=3 SV=1
Length = 243
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P GK+ Q+EYA AV+ G P+VG+K G+VL EK++ + LF+ + K+ I +++
Sbjct: 18 PEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+L+ AR +A ++ +Y E I + L + V + Q+YTQ G
Sbjct: 78 SPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFG 128
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV G ++GI +G+VLA +++ + L + I K+ I D++
Sbjct: 18 PEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAA 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+L+ +AR AQ Y+L Y E I + L +++ I Q YTQ G
Sbjct: 78 ATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHG 128
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV G +VGIK ++G+VLA +++ + L + I K+ I D+I
Sbjct: 19 PEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
SG+ D R+L+ +AR AQ ++ Y E I + L +++ I Q YTQ G
Sbjct: 79 ATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHG 129
>sp|Q5V1D4|PSA2_HALMA Proteasome subunit alpha 2 OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=psmA2 PE=3
SV=1
Length = 244
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G SVG++ +G+V+A ++ ++ L E D I K+ I ++G+
Sbjct: 18 PDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGV 77
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+G D R L+ AR+ +Q +L Y E + L + + +Q+YTQ+G
Sbjct: 78 ASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTG 128
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 1 PSGKLVQIEYALAAVEAGAPSVGIKASNGIVLATEKKQKTILFE-DCIHKVEPITDYIGM 59
P G+L Q+EYA AV+ G ++GIK G+VL +K+ + L E + I KV I +IG
Sbjct: 19 PDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGA 78
Query: 60 VYSGMGPDYRLLVKKARKIAQQYKLVYQENIPTQQLVQRVAAIMQEYTQSG 110
+G+ D R+LV++AR AQ Y+ Y E I LV+ + + Q YTQ G
Sbjct: 79 ATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHG 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,798,333
Number of Sequences: 539616
Number of extensions: 1376563
Number of successful extensions: 4886
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 4474
Number of HSP's gapped (non-prelim): 276
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)