Query psy6668
Match_columns 306
No_of_seqs 327 out of 1856
Neff 7.6
Searched_HMMs 46136
Date Sat Aug 17 00:03:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0044|consensus 99.9 1.7E-22 3.6E-27 174.4 13.0 153 50-205 16-182 (193)
2 COG5126 FRQ1 Ca2+-binding prot 99.8 8.9E-21 1.9E-25 158.6 12.4 134 51-197 8-152 (160)
3 KOG0034|consensus 99.8 2E-20 4.3E-25 161.3 13.1 147 55-206 25-183 (187)
4 KOG0027|consensus 99.8 4.1E-18 8.9E-23 142.9 11.8 129 57-197 2-145 (151)
5 PTZ00183 centrin; Provisional 99.7 5.5E-16 1.2E-20 129.5 14.1 130 56-197 10-150 (158)
6 PTZ00184 calmodulin; Provision 99.7 5.5E-16 1.2E-20 127.9 13.5 130 56-197 4-144 (149)
7 KOG0028|consensus 99.5 6E-14 1.3E-18 115.7 11.1 132 54-197 24-166 (172)
8 KOG0038|consensus 99.5 3.5E-13 7.5E-18 109.5 10.6 143 55-204 20-183 (189)
9 KOG0037|consensus 99.5 3.5E-13 7.6E-18 116.7 10.4 118 62-197 56-184 (221)
10 KOG0031|consensus 99.4 2.7E-12 5.8E-17 105.3 12.1 126 56-197 25-161 (171)
11 COG5126 FRQ1 Ca2+-binding prot 99.2 1.3E-10 2.8E-15 97.6 11.6 110 43-153 23-156 (160)
12 KOG0027|consensus 99.2 1.1E-10 2.3E-15 97.9 11.2 111 43-153 11-149 (151)
13 PTZ00183 centrin; Provisional 99.2 2.2E-10 4.7E-15 95.5 11.8 110 44-153 21-154 (158)
14 KOG0036|consensus 99.2 2.2E-10 4.8E-15 107.4 12.8 114 66-196 17-141 (463)
15 KOG0030|consensus 99.2 1E-10 2.2E-15 94.6 9.1 129 44-198 15-148 (152)
16 KOG0037|consensus 99.2 4.5E-10 9.8E-15 97.5 13.5 134 47-198 64-217 (221)
17 KOG4223|consensus 99.1 1.8E-10 4E-15 105.2 9.0 129 65-205 165-309 (325)
18 PTZ00184 calmodulin; Provision 99.1 1E-09 2.2E-14 90.2 11.9 109 44-152 15-147 (149)
19 PF13499 EF-hand_7: EF-hand do 99.1 1.5E-10 3.2E-15 83.0 4.2 64 126-197 1-64 (66)
20 KOG2562|consensus 99.1 9.7E-10 2.1E-14 104.5 10.4 139 56-197 271-420 (493)
21 PLN02964 phosphatidylserine de 99.0 1.7E-09 3.6E-14 109.0 11.4 98 55-153 135-243 (644)
22 KOG4223|consensus 99.0 2.8E-09 6.1E-14 97.5 11.4 132 64-206 78-242 (325)
23 PF13499 EF-hand_7: EF-hand do 98.9 5E-09 1.1E-13 75.0 6.0 61 91-151 2-66 (66)
24 KOG0044|consensus 98.9 1.4E-08 3.1E-13 88.0 9.9 101 53-153 40-175 (193)
25 cd05022 S-100A13 S-100A13: S-1 98.9 2.8E-09 6.1E-14 81.4 4.5 61 126-198 9-72 (89)
26 KOG0034|consensus 98.8 3E-08 6.5E-13 85.8 10.4 109 45-153 38-175 (187)
27 KOG0028|consensus 98.8 4.8E-08 1E-12 81.0 10.8 112 42-153 35-170 (172)
28 KOG0377|consensus 98.7 5.6E-08 1.2E-12 92.1 9.7 126 65-198 466-612 (631)
29 cd05026 S-100Z S-100Z: S-100Z 98.7 1.8E-08 4E-13 77.6 5.2 65 126-198 11-78 (93)
30 cd05025 S-100A1 S-100A1: S-100 98.7 3.6E-08 7.8E-13 75.6 5.6 66 124-197 8-76 (92)
31 cd05027 S-100B S-100B: S-100B 98.6 2.6E-08 5.7E-13 75.9 4.1 64 126-197 9-75 (88)
32 cd05031 S-100A10_like S-100A10 98.6 6.2E-08 1.3E-12 74.6 5.3 65 125-197 8-75 (94)
33 KOG0036|consensus 98.6 1.9E-07 4.1E-12 88.0 8.5 119 35-153 9-146 (463)
34 PLN02964 phosphatidylserine de 98.5 5.1E-07 1.1E-11 91.3 8.9 93 89-197 143-239 (644)
35 cd00051 EFh EF-hand, calcium b 98.5 8.4E-07 1.8E-11 60.9 7.4 61 91-151 2-62 (63)
36 cd00252 SPARC_EC SPARC_EC; ext 98.5 2.1E-07 4.6E-12 74.5 4.9 59 123-197 46-104 (116)
37 cd05029 S-100A6 S-100A6: S-100 98.4 3.2E-07 6.9E-12 69.9 5.1 63 126-197 11-75 (88)
38 cd00213 S-100 S-100: S-100 dom 98.4 4.2E-07 9.2E-12 68.9 5.4 65 125-197 8-75 (88)
39 smart00027 EH Eps15 homology d 98.4 1.1E-06 2.4E-11 67.8 7.8 65 91-157 12-76 (96)
40 cd00052 EH Eps15 homology doma 98.4 3.9E-07 8.6E-12 64.8 3.9 56 128-197 2-57 (67)
41 smart00027 EH Eps15 homology d 98.4 4.1E-06 8.9E-11 64.7 9.8 64 56-119 3-74 (96)
42 PF13833 EF-hand_8: EF-hand do 98.4 1.4E-06 3E-11 59.8 6.3 52 102-153 1-53 (54)
43 cd00052 EH Eps15 homology doma 98.4 2.2E-06 4.9E-11 60.9 7.6 62 92-155 2-63 (67)
44 cd05022 S-100A13 S-100A13: S-1 98.3 2.5E-06 5.4E-11 65.1 7.5 66 90-155 9-77 (89)
45 cd05027 S-100B S-100B: S-100B 98.3 6E-06 1.3E-10 62.9 9.4 67 89-155 8-81 (88)
46 cd05023 S-100A11 S-100A11: S-1 98.3 1.1E-06 2.4E-11 67.1 5.2 65 125-197 9-76 (89)
47 KOG4251|consensus 98.3 1.6E-06 3.5E-11 76.7 6.8 144 44-199 105-343 (362)
48 KOG0031|consensus 98.3 8.1E-06 1.7E-10 67.5 10.2 109 45-153 37-165 (171)
49 cd05025 S-100A1 S-100A1: S-100 98.3 6.6E-06 1.4E-10 63.0 9.1 69 89-157 9-84 (92)
50 cd05026 S-100Z S-100Z: S-100Z 98.3 6.3E-06 1.4E-10 63.4 8.9 67 89-155 10-83 (93)
51 cd00051 EFh EF-hand, calcium b 98.3 1.6E-06 3.4E-11 59.4 5.0 59 127-197 2-60 (63)
52 KOG2643|consensus 98.3 1.3E-05 2.8E-10 76.3 12.5 136 48-197 207-380 (489)
53 cd05031 S-100A10_like S-100A10 98.3 6.5E-06 1.4E-10 63.3 8.6 66 90-155 9-81 (94)
54 cd00252 SPARC_EC SPARC_EC; ext 98.2 5.5E-06 1.2E-10 66.4 7.6 60 89-152 48-107 (116)
55 PF00036 EF-hand_1: EF hand; 98.2 1.6E-06 3.6E-11 52.0 3.3 27 127-153 2-28 (29)
56 KOG0751|consensus 98.2 1.8E-05 4E-10 76.2 11.1 144 50-195 23-201 (694)
57 KOG2643|consensus 98.2 6E-06 1.3E-10 78.5 7.7 137 45-197 291-449 (489)
58 KOG4666|consensus 98.1 1.5E-06 3.3E-11 79.6 3.3 122 76-210 240-371 (412)
59 PF13833 EF-hand_8: EF-hand do 98.1 3.2E-06 6.9E-11 57.9 3.9 48 138-197 1-49 (54)
60 cd00213 S-100 S-100: S-100 dom 98.1 1.9E-05 4.2E-10 59.7 8.3 65 90-154 9-80 (88)
61 KOG0377|consensus 98.1 1.4E-05 3E-10 76.1 8.6 127 4-154 486-616 (631)
62 KOG4251|consensus 98.1 2E-05 4.4E-10 69.8 8.9 127 63-200 101-263 (362)
63 cd05029 S-100A6 S-100A6: S-100 98.0 2.6E-05 5.6E-10 59.4 7.7 66 90-155 11-81 (88)
64 PF00036 EF-hand_1: EF hand; 98.0 7.4E-06 1.6E-10 49.1 3.7 27 91-117 2-28 (29)
65 cd05030 calgranulins Calgranul 98.0 1E-05 2.2E-10 61.6 4.8 65 126-198 9-76 (88)
66 KOG0041|consensus 98.0 7.8E-06 1.7E-10 70.4 4.3 60 126-197 100-159 (244)
67 cd05023 S-100A11 S-100A11: S-1 98.0 4.8E-05 1E-09 58.0 8.2 66 90-155 10-82 (89)
68 KOG0041|consensus 97.9 5.3E-05 1.1E-09 65.3 8.3 98 55-152 91-202 (244)
69 PF13405 EF-hand_6: EF-hand do 97.9 9.9E-06 2.1E-10 49.2 2.9 27 126-152 1-27 (31)
70 cd05024 S-100A10 S-100A10: A s 97.8 0.0001 2.2E-09 56.3 7.7 31 124-154 47-77 (91)
71 cd05030 calgranulins Calgranul 97.7 0.00023 5E-09 54.1 7.9 65 91-155 10-81 (88)
72 PF13202 EF-hand_5: EF hand; P 97.6 6.6E-05 1.4E-09 43.4 3.1 24 127-150 1-24 (25)
73 KOG0040|consensus 97.6 0.00036 7.8E-09 74.8 10.3 93 57-150 2247-2358(2399)
74 PRK12309 transaldolase/EF-hand 97.6 0.00017 3.6E-09 69.5 7.3 54 89-155 334-387 (391)
75 PF14658 EF-hand_9: EF-hand do 97.6 0.00022 4.8E-09 51.0 5.8 61 93-153 2-64 (66)
76 cd05024 S-100A10 S-100A10: A s 97.5 0.00022 4.7E-09 54.5 5.7 63 126-197 9-72 (91)
77 KOG4065|consensus 97.5 0.00025 5.5E-09 55.9 5.3 76 123-198 65-142 (144)
78 PF12763 EF-hand_4: Cytoskelet 97.4 0.00035 7.7E-09 54.8 5.9 64 91-157 12-75 (104)
79 KOG0030|consensus 97.4 0.0015 3.3E-08 53.3 8.8 96 90-194 12-109 (152)
80 PF14658 EF-hand_9: EF-hand do 97.3 0.00029 6.4E-09 50.4 4.1 58 129-197 2-60 (66)
81 PF14788 EF-hand_10: EF hand; 97.3 0.0009 2E-08 45.3 6.0 49 105-153 1-49 (51)
82 KOG0038|consensus 97.2 0.0012 2.6E-08 54.3 7.0 81 73-153 81-177 (189)
83 PF10591 SPARC_Ca_bdg: Secrete 97.1 0.00019 4.1E-09 57.2 1.4 62 121-196 50-111 (113)
84 KOG1029|consensus 97.1 0.0018 4E-08 65.7 8.3 128 56-198 9-254 (1118)
85 PF13202 EF-hand_5: EF hand; P 97.1 0.00069 1.5E-08 39.0 3.2 25 91-115 1-25 (25)
86 KOG2562|consensus 97.1 0.0012 2.6E-08 63.6 6.5 137 45-196 144-338 (493)
87 PF12763 EF-hand_4: Cytoskelet 97.0 0.0044 9.5E-08 48.6 7.8 62 56-118 3-72 (104)
88 PRK12309 transaldolase/EF-hand 96.9 0.0021 4.5E-08 62.0 6.5 51 65-118 336-386 (391)
89 KOG4347|consensus 96.9 0.0019 4.1E-08 64.6 6.3 96 51-147 492-612 (671)
90 KOG0751|consensus 96.9 0.0046 9.9E-08 60.1 8.4 101 48-155 82-209 (694)
91 PF13405 EF-hand_6: EF-hand do 96.9 0.0015 3.3E-08 39.4 3.5 26 91-116 2-27 (31)
92 PF10591 SPARC_Ca_bdg: Secrete 96.8 0.0013 2.7E-08 52.5 3.7 59 89-149 54-112 (113)
93 KOG0040|consensus 96.6 0.0079 1.7E-07 65.0 8.2 91 91-192 2255-2352(2399)
94 KOG0046|consensus 96.3 0.011 2.3E-07 58.0 7.2 67 51-118 7-86 (627)
95 smart00054 EFh EF-hand, calciu 96.1 0.0062 1.3E-07 34.4 2.9 27 127-153 2-28 (29)
96 PF14788 EF-hand_10: EF hand; 95.7 0.029 6.2E-07 38.0 5.0 49 57-118 2-50 (51)
97 smart00054 EFh EF-hand, calciu 95.6 0.019 4.2E-07 32.2 3.4 27 91-117 2-28 (29)
98 KOG0046|consensus 95.0 0.023 5E-07 55.7 3.8 62 126-197 20-81 (627)
99 KOG4065|consensus 94.9 0.065 1.4E-06 42.5 5.2 58 93-150 71-142 (144)
100 KOG3866|consensus 94.6 0.22 4.8E-06 46.1 8.7 115 33-154 237-355 (442)
101 KOG4666|consensus 94.2 0.078 1.7E-06 49.3 4.9 89 64-153 260-359 (412)
102 KOG1955|consensus 94.0 0.12 2.6E-06 50.6 6.0 64 55-118 223-294 (737)
103 KOG3555|consensus 94.0 0.087 1.9E-06 49.3 4.8 56 124-195 249-304 (434)
104 KOG0169|consensus 93.9 0.52 1.1E-05 48.5 10.7 122 62-197 135-270 (746)
105 KOG3555|consensus 93.5 0.14 2.9E-06 48.1 5.2 94 56-153 200-310 (434)
106 KOG4578|consensus 93.3 0.026 5.5E-07 52.4 0.2 62 125-197 333-394 (421)
107 KOG3866|consensus 93.1 0.079 1.7E-06 48.9 3.0 70 128-197 247-320 (442)
108 PF09279 EF-hand_like: Phospho 92.9 0.32 6.8E-06 36.0 5.7 62 91-153 2-69 (83)
109 KOG0998|consensus 87.8 0.82 1.8E-05 48.6 5.2 131 56-201 122-345 (847)
110 KOG4578|consensus 87.6 0.46 9.9E-06 44.4 2.8 64 90-153 334-398 (421)
111 KOG0169|consensus 87.3 1.3 2.7E-05 45.8 6.0 66 89-154 136-201 (746)
112 KOG1707|consensus 87.0 4.2 9.2E-05 41.0 9.3 100 55-154 187-344 (625)
113 KOG0035|consensus 86.6 2.6 5.5E-05 44.6 7.9 92 57-149 741-848 (890)
114 PF05517 p25-alpha: p25-alpha 86.0 3.2 6.9E-05 34.8 6.9 58 102-159 15-75 (154)
115 PF05042 Caleosin: Caleosin re 85.1 3.4 7.3E-05 35.3 6.6 30 124-153 95-124 (174)
116 KOG0039|consensus 85.1 2.3 5E-05 44.0 6.7 80 103-193 2-81 (646)
117 PF05042 Caleosin: Caleosin re 84.7 5 0.00011 34.3 7.4 69 77-152 90-165 (174)
118 PF09279 EF-hand_like: Phospho 84.0 0.95 2.1E-05 33.4 2.6 61 126-197 1-65 (83)
119 PF08726 EFhand_Ca_insen: Ca2+ 82.5 0.53 1.1E-05 34.1 0.6 29 123-152 4-32 (69)
120 PF09069 EF-hand_3: EF-hand; 81.2 4.8 0.0001 30.7 5.4 70 124-197 2-71 (90)
121 KOG1029|consensus 79.0 3.2 7E-05 43.0 5.0 63 89-153 195-257 (1118)
122 KOG4347|consensus 78.7 5.3 0.00012 40.7 6.4 60 123-195 553-612 (671)
123 PLN02952 phosphoinositide phos 76.6 7 0.00015 40.0 6.6 52 102-154 13-66 (599)
124 cd07313 terB_like_2 tellurium 75.7 13 0.00028 28.3 6.7 85 53-150 12-97 (104)
125 KOG1955|consensus 74.8 6.3 0.00014 39.0 5.5 63 90-154 232-294 (737)
126 PF14513 DAG_kinase_N: Diacylg 74.3 7.5 0.00016 32.0 5.1 48 91-138 27-82 (138)
127 PF03985 Paf1: Paf1 ; InterPr 72.6 3.6 7.7E-05 40.5 3.4 44 23-69 1-45 (436)
128 KOG0042|consensus 70.7 11 0.00023 38.1 6.1 72 80-154 587-658 (680)
129 cd07316 terB_like_DjlA N-termi 69.8 46 0.00099 25.2 9.1 83 53-149 12-97 (106)
130 KOG2243|consensus 69.7 3 6.6E-05 45.8 2.2 59 130-201 4062-4120(5019)
131 PF12174 RST: RCD1-SRO-TAF4 (R 67.8 16 0.00034 26.5 5.0 49 103-154 6-54 (70)
132 PLN02952 phosphoinositide phos 64.3 42 0.00091 34.5 9.0 88 54-153 14-110 (599)
133 PF08414 NADPH_Ox: Respiratory 62.9 23 0.0005 27.5 5.3 56 94-154 35-93 (100)
134 KOG0042|consensus 60.6 19 0.0004 36.5 5.6 67 56-122 586-662 (680)
135 KOG2557|consensus 59.8 29 0.00062 33.3 6.4 100 56-155 13-124 (427)
136 KOG0035|consensus 59.5 20 0.00044 38.2 5.9 101 89-201 747-852 (890)
137 PRK09430 djlA Dna-J like membr 58.3 1.5E+02 0.0032 27.1 11.5 64 91-160 97-163 (267)
138 KOG2478|consensus 57.7 7.4 0.00016 38.0 2.3 38 15-52 8-45 (452)
139 PF09068 EF-hand_2: EF hand; 57.2 53 0.0012 26.5 6.9 27 127-153 99-125 (127)
140 KOG4286|consensus 53.8 79 0.0017 33.2 8.8 63 89-152 470-532 (966)
141 PRK05849 hypothetical protein; 50.8 1.4E+02 0.003 31.8 10.5 99 54-155 379-488 (783)
142 PF00404 Dockerin_1: Dockerin 50.1 26 0.00056 19.2 2.7 16 135-150 1-16 (21)
143 PF09068 EF-hand_2: EF hand; 50.1 68 0.0015 25.9 6.5 90 105-194 14-118 (127)
144 PF02761 Cbl_N2: CBL proto-onc 47.0 71 0.0015 24.1 5.6 50 104-153 21-70 (85)
145 KOG2243|consensus 46.7 30 0.00064 38.8 4.7 19 70-88 4064-4082(5019)
146 KOG2871|consensus 46.2 19 0.00042 34.5 3.0 64 123-197 307-370 (449)
147 KOG4301|consensus 42.6 1.6E+02 0.0034 28.2 8.3 65 90-155 111-175 (434)
148 PF12872 OST-HTH: OST-HTH/LOTU 42.0 90 0.002 21.9 5.5 36 77-114 21-56 (74)
149 KOG0998|consensus 41.8 9.9 0.00021 40.6 0.5 61 91-153 285-345 (847)
150 KOG4403|consensus 41.4 79 0.0017 31.0 6.3 62 89-154 68-130 (575)
151 cd06404 PB1_aPKC PB1 domain is 40.3 58 0.0013 24.4 4.2 38 105-142 19-76 (83)
152 PLN02228 Phosphoinositide phos 37.2 1.3E+02 0.0027 30.9 7.4 49 105-153 38-92 (567)
153 PF05517 p25-alpha: p25-alpha 36.6 1.9E+02 0.0041 24.0 7.3 57 62-118 1-70 (154)
154 PF12631 GTPase_Cys_C: Catalyt 36.3 48 0.001 23.8 3.2 49 126-182 24-72 (73)
155 KOG4004|consensus 35.5 15 0.00032 32.2 0.4 47 103-151 202-248 (259)
156 PF08414 NADPH_Ox: Respiratory 34.0 98 0.0021 24.0 4.7 59 61-121 28-96 (100)
157 PF07879 PHB_acc_N: PHB/PHA ac 33.5 31 0.00068 24.5 1.8 49 132-185 10-61 (64)
158 KOG4004|consensus 32.5 23 0.0005 31.1 1.2 50 68-117 192-250 (259)
159 cd07177 terB_like tellurium re 31.4 2E+02 0.0043 21.0 6.2 84 54-150 13-97 (104)
160 KOG1707|consensus 30.1 2.2E+02 0.0047 29.3 7.6 82 52-139 304-400 (625)
161 PF05099 TerB: Tellurite resis 29.2 94 0.002 24.7 4.3 82 53-147 36-118 (140)
162 PF08976 DUF1880: Domain of un 28.4 42 0.0009 26.8 1.9 25 92-116 10-34 (118)
163 PF14513 DAG_kinase_N: Diacylg 27.5 1.9E+02 0.0041 23.8 5.7 37 138-185 45-81 (138)
164 PLN02222 phosphoinositide phos 27.0 2.1E+02 0.0045 29.4 7.0 54 58-116 23-89 (581)
165 COG5562 Phage envelope protein 25.5 1.4E+02 0.003 24.5 4.5 17 137-153 84-100 (137)
166 PLN02230 phosphoinositide phos 23.9 2.9E+02 0.0063 28.5 7.4 60 93-153 33-102 (598)
167 TIGR01848 PHA_reg_PhaR polyhyd 22.7 1.5E+02 0.0033 23.2 4.1 51 132-187 10-63 (107)
168 KOG1265|consensus 22.2 1.9E+02 0.004 31.3 5.7 87 106-197 205-295 (1189)
169 PF01023 S_100: S-100/ICaBP ty 21.9 1.8E+02 0.0038 18.8 3.7 28 126-153 7-36 (44)
170 KOG0506|consensus 20.7 2.6E+02 0.0056 28.1 6.0 115 90-204 87-214 (622)
171 PF11116 DUF2624: Protein of u 20.5 3.8E+02 0.0082 20.2 8.4 70 104-182 13-82 (85)
No 1
>KOG0044|consensus
Probab=99.89 E-value=1.7e-22 Score=174.42 Aligned_cols=153 Identities=31% Similarity=0.528 Sum_probs=137.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 50 ESTRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 50 D~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
++...++++..|++.||+.|+..|+++ .++.++|+.+ .+++.+|+.+|.|++|.|+|.||+.+++.+
T Consensus 16 ~l~~~t~f~~~ei~~~Yr~Fk~~cP~G--~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~ 93 (193)
T KOG0044|consen 16 QLVQQTKFSKKEIQQWYRGFKNECPSG--RLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLT 93 (193)
T ss_pred HHHHhcCCCHHHHHHHHHHhcccCCCC--ccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHH
Confidence 345578999999999999999988765 9999999998 789999999999999999999999999999
Q ss_pred ccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc-
Q psy6668 119 CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP- 197 (306)
Q Consensus 119 ~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~- 197 (306)
.++..+++++++|++||.|++|+|+++|+..++++++.+++....+ ..+...++.++.+|+.+|.|+||.||+++|+.
T Consensus 94 ~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~ 172 (193)
T KOG0044|consen 94 SRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-EDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG 172 (193)
T ss_pred cCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-cccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence 9999999999999999999999999999999999999998864443 45677899999999999999999999988876
Q ss_pred --CCCccccC
Q psy6668 198 --RSPYSLVP 205 (306)
Q Consensus 198 --~~p~ll~~ 205 (306)
..|.++.+
T Consensus 173 ~~~d~~i~~~ 182 (193)
T KOG0044|consen 173 CKADPSILRA 182 (193)
T ss_pred hhhCHHHHHH
Confidence 55666554
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.85 E-value=8.9e-21 Score=158.63 Aligned_cols=134 Identities=20% Similarity=0.209 Sum_probs=122.9
Q ss_pred cCCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-
Q psy6668 51 STRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC- 119 (306)
Q Consensus 51 ~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~- 119 (306)
......++.+|+++|+++|..+|++++|.|++.+|..+ ..+.+||..+|. +++.|+|.+|+.+|....
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~ 86 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK 86 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc
Confidence 34557899999999999999999999999999999998 899999999999 999999999999999876
Q ss_pred cCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 120 RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 120 ~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
....+++++++|++||.|++|+|+..||+.+++.+++.+ .+++++.+++.+|.|+||.|+|++|++
T Consensus 87 ~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~------------~deev~~ll~~~d~d~dG~i~~~eF~~ 152 (160)
T COG5126 87 RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERL------------SDEEVEKLLKEYDEDGDGEIDYEEFKK 152 (160)
T ss_pred cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccC------------CHHHHHHHHHhcCCCCCceEeHHHHHH
Confidence 577799999999999999999999999999999854433 499999999999999999999999976
No 3
>KOG0034|consensus
Probab=99.84 E-value=2e-20 Score=161.31 Aligned_cols=147 Identities=23% Similarity=0.325 Sum_probs=129.7
Q ss_pred CCCCHHHHHHHHHHHhccCCC-CCCcccHHHHHhH------HHHHHHHHHhCCCCCCc-ccHHHHHHHHHHhccC-ChHH
Q psy6668 55 GSGNGKNITFIQQQKDNNCLA-GGRCDHKLDIKQI------RYAHYVFNTLDHNKTGF-LNFEDFVKGLSILCRG-SEEE 125 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~-~~G~I~~~eF~~~------~~~~~lF~~~D~d~dG~-I~feEF~~~l~~~~~~-~~ee 125 (306)
+.++..|+..++.+|.+++.+ ++|.|+++||..+ +..++++..++.+++|. |+|++|+..++.+... ..++
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~ 104 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKRE 104 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHH
Confidence 569999999999999999999 9999999999999 89999999999999998 9999999999998774 4455
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc---CCCcc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP---RSPYS 202 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~---~~p~l 202 (306)
+++++|++||.+++|+|+++|+..++..+ .+...++ .++.....++.+|.++|.|+||+|+|+||.. ++|.+
T Consensus 105 Kl~faF~vYD~~~~G~I~reel~~iv~~~---~~~~~~~--~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~ 179 (187)
T KOG0034|consen 105 KLRFAFRVYDLDGDGFISREELKQILRMM---VGENDDM--SDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDL 179 (187)
T ss_pred HHHHHHHHhcCCCCCcCcHHHHHHHHHHH---HccCCcc--hHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccH
Confidence 99999999999999999999999999985 3432222 4677899999999999999999999977754 78888
Q ss_pred ccCC
Q psy6668 203 LVPE 206 (306)
Q Consensus 203 l~~~ 206 (306)
++.+
T Consensus 180 ~~~m 183 (187)
T KOG0034|consen 180 LEKM 183 (187)
T ss_pred HHHc
Confidence 7754
No 4
>KOG0027|consensus
Probab=99.76 E-value=4.1e-18 Score=142.91 Aligned_cols=129 Identities=16% Similarity=0.212 Sum_probs=108.6
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccC-C---
Q psy6668 57 GNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-S--- 122 (306)
Q Consensus 57 ~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~-~--- 122 (306)
++..++..+.+.|..+|.+++|+|+..++..+ ..+..++..+|.+++|.|+|+||+.++...... .
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~ 81 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE 81 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence 34566666777777777777777777777776 688889999999999999999999999876542 2
Q ss_pred -hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 123 -EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 123 -~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..+.++.+|+.||.|++|+|+.+||+.+|..++... ..+.++.+++.+|.|+||.|+|++|++
T Consensus 82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~------------~~~e~~~mi~~~d~d~dg~i~f~ef~~ 145 (151)
T KOG0027|consen 82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKL------------TDEECKEMIREVDVDGDGKVNFEEFVK 145 (151)
T ss_pred ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcC------------CHHHHHHHHHhcCCCCCCeEeHHHHHH
Confidence 345899999999999999999999999999965433 389999999999999999999999976
No 5
>PTZ00183 centrin; Provisional
Probab=99.69 E-value=5.5e-16 Score=129.55 Aligned_cols=130 Identities=14% Similarity=0.136 Sum_probs=113.9
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-cCChH
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEE 124 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~-~~~~e 124 (306)
.++..+++.+.+.|..++.+++|.|+..+|..+ ..+..+|..+|.+++|.|+|+||+.++.... .....
T Consensus 10 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 89 (158)
T PTZ00183 10 GLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPR 89 (158)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcH
Confidence 578999999999999999999999999999876 5789999999999999999999999887643 34566
Q ss_pred HHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+.++.+|+.+|.+++|+|+.+||..++...+ ... ....+..+|..+|.|++|.|+|.+|+.
T Consensus 90 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~----~~l--------~~~~~~~~~~~~d~~~~g~i~~~ef~~ 150 (158)
T PTZ00183 90 EEILKAFRLFDDDKTGKISLKNLKRVAKELG----ETI--------TDEELQEMIDEADRNGDGEISEEEFYR 150 (158)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC----CCC--------CHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 7899999999999999999999999998743 222 378899999999999999999988855
No 6
>PTZ00184 calmodulin; Provisional
Probab=99.69 E-value=5.5e-16 Score=127.86 Aligned_cols=130 Identities=15% Similarity=0.230 Sum_probs=113.5
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChH
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEE 124 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~e 124 (306)
.++.++++.+.+.|..+|.+++|.|+.++|..+ ..+..+|..+|.+++|.|+|+||+.++..... ....
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~ 83 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSE 83 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHH
Confidence 367889999999999999999999999999876 57899999999999999999999999886543 4566
Q ss_pred HHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+.++.+|+.||.+++|+|+.+||..++..+ +... ..+.+..+|..+|.+++|.|+|.+|+.
T Consensus 84 ~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~----~~~~--------~~~~~~~~~~~~d~~~~g~i~~~ef~~ 144 (149)
T PTZ00184 84 EEIKEAFKVFDRDGNGFISAAELRHVMTNL----GEKL--------TDEEVDEMIREADVDGDGQINYEEFVK 144 (149)
T ss_pred HHHHHHHHhhCCCCCCeEeHHHHHHHHHHH----CCCC--------CHHHHHHHHHhcCCCCCCcCcHHHHHH
Confidence 789999999999999999999999999874 3222 378889999999999999999999864
No 7
>KOG0028|consensus
Probab=99.54 E-value=6e-14 Score=115.72 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=114.9
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHH-hccCC
Q psy6668 54 RGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI-LCRGS 122 (306)
Q Consensus 54 dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~-~~~~~ 122 (306)
...++.++-+.+..+|..++++++|+|+.+||..+ ..+..|...+|.++.|.|+|++|+..+.. +....
T Consensus 24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d 103 (172)
T KOG0028|consen 24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD 103 (172)
T ss_pred CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence 34567777788888898889999999999999655 67888999999999999999999998774 34456
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..++++.+|+++|.|++|.|+..+|+.+.+.++.. + +++++.+|+.++|.|+||-|+-++|+.
T Consensus 104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen----l--------tD~El~eMIeEAd~d~dgevneeEF~~ 166 (172)
T KOG0028|consen 104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN----L--------TDEELMEMIEEADRDGDGEVNEEEFIR 166 (172)
T ss_pred cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc----c--------cHHHHHHHHHHhcccccccccHHHHHH
Confidence 88999999999999999999999999999985432 2 489999999999999999999999964
No 8
>KOG0038|consensus
Probab=99.48 E-value=3.5e-13 Score=109.54 Aligned_cols=143 Identities=18% Similarity=0.206 Sum_probs=118.2
Q ss_pred CCCCHHHHHHHHHHHhccCCCC-----------CCcccHHHHHhH------HHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 55 GSGNGKNITFIQQQKDNNCLAG-----------GRCDHKLDIKQI------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~~-----------~G~I~~~eF~~~------~~~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
+.|+.+++-+++.+|..+.++- .-.+..+...++ +.-+++...|..|+.|.++|++|+.+++.
T Consensus 20 TFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMPELkenpfk~ri~e~FSeDG~GnlsfddFlDmfSV 99 (189)
T KOG0038|consen 20 TFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMPELKENPFKRRICEVFSEDGRGNLSFDDFLDMFSV 99 (189)
T ss_pred ccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhChhhhcChHHHHHHHHhccCCCCcccHHHHHHHHHH
Confidence 6789999999999998876542 124556666555 67789999999999999999999999999
Q ss_pred hcc-CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeec-
Q psy6668 118 LCR-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSIS- 195 (306)
Q Consensus 118 ~~~-~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~ef- 195 (306)
++. .+.+-++..+|++||.|++++|..++|...++.+- ..+++++...-.++++++++|.||||+|++.+|
T Consensus 100 ~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lT-------r~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe 172 (189)
T KOG0038|consen 100 FSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLT-------RDELSDEEVELICEKVIEEADLDGDGKLSFAEFE 172 (189)
T ss_pred HHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHh-------hccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHH
Confidence 876 67777899999999999999999999999998852 124556667888999999999999999999666
Q ss_pred --ccCCCcccc
Q psy6668 196 --IPRSPYSLV 204 (306)
Q Consensus 196 --v~~~p~ll~ 204 (306)
+.+.|.+|.
T Consensus 173 ~~i~raPDFls 183 (189)
T KOG0038|consen 173 HVILRAPDFLS 183 (189)
T ss_pred HHHHhCcchHh
Confidence 457777764
No 9
>KOG0037|consensus
Probab=99.46 E-value=3.5e-13 Score=116.67 Aligned_cols=118 Identities=14% Similarity=0.117 Sum_probs=99.0
Q ss_pred HHHHHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHH
Q psy6668 62 ITFIQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWI 130 (306)
Q Consensus 62 l~~l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~ 130 (306)
...+...|...|.++.|.|+.+|++.+ +.++.|+..||.+.+|+|+|+||..+|..+. .|+.+
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~------~Wr~v 129 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN------QWRNV 129 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH------HHHHH
Confidence 345677788888999999999999988 7899999999999999999999999998765 89999
Q ss_pred hhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 131 FCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 131 F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
|+.||+|++|.|+..||+.+|..++..+. .+..+.+++++|.-+.|.|.|++|++
T Consensus 130 F~~~D~D~SG~I~~sEL~~Al~~~Gy~Ls------------pq~~~~lv~kyd~~~~g~i~FD~FI~ 184 (221)
T KOG0037|consen 130 FRTYDRDRSGTIDSSELRQALTQLGYRLS------------PQFYNLLVRKYDRFGGGRIDFDDFIQ 184 (221)
T ss_pred HHhcccCCCCcccHHHHHHHHHHcCcCCC------------HHHHHHHHHHhccccCCceeHHHHHH
Confidence 99999999999999999999999654432 56666667777766677777766655
No 10
>KOG0031|consensus
Probab=99.42 E-value=2.7e-12 Score=105.32 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=111.3
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh-ccCChH
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL-CRGSEE 124 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~-~~~~~e 124 (306)
.|+..||+.+.++|..+|.+++|.|++++++.. ..++.|++. ..|-|+|--|+.++... +...++
T Consensus 25 mf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe 100 (171)
T KOG0031|consen 25 MFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPE 100 (171)
T ss_pred HhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHH
Confidence 478999999999999999999999999999997 667777755 56899999999998854 446788
Q ss_pred HHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+.+..+|+.||.+++|.|..+.|+++|...+..+ ..++|+.+|+.+-.|..|.|+|..|+.
T Consensus 101 ~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~------------~~eEV~~m~r~~p~d~~G~~dy~~~~~ 161 (171)
T KOG0031|consen 101 EVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRF------------TDEEVDEMYREAPIDKKGNFDYKAFTY 161 (171)
T ss_pred HHHHHHHHhcCccCCCccCHHHHHHHHHHhcccC------------CHHHHHHHHHhCCcccCCceeHHHHHH
Confidence 8999999999999999999999999999965544 489999999999999999999988764
No 11
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.22 E-value=1.3e-10 Score=97.59 Aligned_cols=110 Identities=15% Similarity=0.235 Sum_probs=97.8
Q ss_pred cccccccccCCCCCCCHHHHHHHHHHHhc-------------cCCCCCCcccHHHHHhH-----------HHHHHHHHHh
Q psy6668 43 KFIAYPFESTRRGSGNGKNITFIQQQKDN-------------NCLAGGRCDHKLDIKQI-----------RYAHYVFNTL 98 (306)
Q Consensus 43 ~~l~~~fD~~~dg~~s~~El~~l~~~F~~-------------~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~ 98 (306)
+..+.++|.+++|.++..++..+++.|.. ++. +++.|+..+|..+ +.+.+.|+.|
T Consensus 23 keaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~f 101 (160)
T COG5126 23 KEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLF 101 (160)
T ss_pred HHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHh
Confidence 34567799999999999999998875543 333 5689999999998 7899999999
Q ss_pred CCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 99 DHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 99 D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
|.|++|+|+..|+...+..+.....++++..+++.+|.|++|+|+.+||.+.+..
T Consensus 102 D~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 102 DKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred CCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 9999999999999999998888899999999999999999999999999987764
No 12
>KOG0027|consensus
Probab=99.22 E-value=1.1e-10 Score=97.89 Aligned_cols=111 Identities=16% Similarity=0.232 Sum_probs=98.6
Q ss_pred cccccccccCCCCCCCHHHHHHHHHH-------------HhccCCCCCCcccHHHHHhH-----------H----HHHHH
Q psy6668 43 KFIAYPFESTRRGSGNGKNITFIQQQ-------------KDNNCLAGGRCDHKLDIKQI-----------R----YAHYV 94 (306)
Q Consensus 43 ~~l~~~fD~~~dg~~s~~El~~l~~~-------------F~~~d~~~~G~I~~~eF~~~-----------~----~~~~l 94 (306)
+..+..||.+++|.++..|+..+.+. +...+.+++|.|+.++|..+ . .+...
T Consensus 11 ~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~ea 90 (151)
T KOG0027|consen 11 KEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEA 90 (151)
T ss_pred HHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHH
Confidence 34567799999999999999886654 44567888999999999998 2 78999
Q ss_pred HHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 95 FNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 95 F~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
|..||.|++|.|+..|+..+|..+......+.+..+++..|.|++|.|+.+||.+++..
T Consensus 91 F~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 91 FRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 99999999999999999999999988888999999999999999999999999888763
No 13
>PTZ00183 centrin; Provisional
Probab=99.20 E-value=2.2e-10 Score=95.52 Aligned_cols=110 Identities=20% Similarity=0.238 Sum_probs=94.7
Q ss_pred ccccccccCCCCCCCHHHHHHHHHH-------------HhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhC
Q psy6668 44 FIAYPFESTRRGSGNGKNITFIQQQ-------------KDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLD 99 (306)
Q Consensus 44 ~l~~~fD~~~dg~~s~~El~~l~~~-------------F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D 99 (306)
..+..+|.+++|.++..|+..+++. |..++.+++|.|+.++|..+ ..+..+|..+|
T Consensus 21 ~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D 100 (158)
T PTZ00183 21 EAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFD 100 (158)
T ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhC
Confidence 4556689999999999999775543 44567788999999999876 36788999999
Q ss_pred CCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 100 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 100 ~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.+++|.|+.+||..++.........+.++.+|..+|.|++|.|+.+||..++..
T Consensus 101 ~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 101 DDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred CCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 999999999999999987666677888999999999999999999999988764
No 14
>KOG0036|consensus
Probab=99.19 E-value=2.2e-10 Score=107.42 Aligned_cols=114 Identities=17% Similarity=0.205 Sum_probs=90.4
Q ss_pred HHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhh
Q psy6668 66 QQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLY 134 (306)
Q Consensus 66 ~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~ 134 (306)
...|..+|.+++|.++..++.+. ..+..+|..+|.|.+|.++|+||...+.. .+.++..+|...
T Consensus 17 ~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~~~F~~i 91 (463)
T KOG0036|consen 17 RCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELYRIFQSI 91 (463)
T ss_pred HHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHHHHHhhh
Confidence 33344444444444444444432 57788999999999999999999998873 566899999999
Q ss_pred ccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecc
Q psy6668 135 DINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISI 196 (306)
Q Consensus 135 D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv 196 (306)
|.++||.|..+|+.+.++.+ |.+++ ++.+..+|+.+|.++++.|+++++-
T Consensus 92 D~~hdG~i~~~Ei~~~l~~~----gi~l~--------de~~~k~~e~~d~~g~~~I~~~e~r 141 (463)
T KOG0036|consen 92 DLEHDGKIDPNEIWRYLKDL----GIQLS--------DEKAAKFFEHMDKDGKATIDLEEWR 141 (463)
T ss_pred ccccCCccCHHHHHHHHHHh----CCccC--------HHHHHHHHHHhccCCCeeeccHHHH
Confidence 99999999999999999985 44443 8888999999999999999997663
No 15
>KOG0030|consensus
Probab=99.19 E-value=1e-10 Score=94.56 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=98.4
Q ss_pred ccccccccCCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCC--CCCcccHHHHHHHHHHhcc-
Q psy6668 44 FIAYPFESTRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHN--KTGFLNFEDFVKGLSILCR- 120 (306)
Q Consensus 44 ~l~~~fD~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d--~dG~I~feEF~~~l~~~~~- 120 (306)
-+|.+||...|++++..++-.++++.....++. .+.+....++.+ +-.+|+|++|+.++..+.+
T Consensus 15 e~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~a-------------eV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn 81 (152)
T KOG0030|consen 15 EAFLLFDRTGDGKISGSQVGDVLRALGQNPTNA-------------EVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN 81 (152)
T ss_pred HHHHHHhccCcccccHHHHHHHHHHhcCCCcHH-------------HHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc
Confidence 355556666666666666666666665544432 555566666665 3468999999999987765
Q ss_pred --CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 121 --GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 121 --~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
+-..+..-.-.+.||++++|.|...||+.+|..+|+.+. +++++.+.... .|.+|.|.|+.||++
T Consensus 82 k~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~------------eeEVe~Llag~-eD~nG~i~YE~fVk~ 148 (152)
T KOG0030|consen 82 KDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLT------------EEEVEELLAGQ-EDSNGCINYEAFVKH 148 (152)
T ss_pred cccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhcc------------HHHHHHHHccc-cccCCcCcHHHHHHH
Confidence 345667788899999999999999999999999887763 88899998887 578999999999874
No 16
>KOG0037|consensus
Probab=99.19 E-value=4.5e-10 Score=97.50 Aligned_cols=134 Identities=17% Similarity=0.132 Sum_probs=116.1
Q ss_pred cccccCCCCCCCHHHHHHHHH--------------HHhccCCCCCCcccHHHHHhH----HHHHHHHHHhCCCCCCcccH
Q psy6668 47 YPFESTRRGSGNGKNITFIQQ--------------QKDNNCLAGGRCDHKLDIKQI----RYAHYVFNTLDHNKTGFLNF 108 (306)
Q Consensus 47 ~~fD~~~dg~~s~~El~~l~~--------------~F~~~d~~~~G~I~~~eF~~~----~~~~~lF~~~D~d~dG~I~f 108 (306)
...|.++.+.|+.+||+..+. ....++.+.+|+|+.+||..+ ..|+.+|..+|.|++|.|+.
T Consensus 64 ~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D~D~SG~I~~ 143 (221)
T KOG0037|consen 64 QSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFRTYDRDRSGTIDS 143 (221)
T ss_pred HhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhcccCCCCcccH
Confidence 345888889999999988643 233467888999999999998 89999999999999999999
Q ss_pred HHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCC
Q psy6668 109 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEM 188 (306)
Q Consensus 109 eEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG 188 (306)
.|+..++..+......+-+..+++.||..++|.|..++|.+.+.. ...+-+.|++.|++.+|
T Consensus 144 sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~------------------L~~lt~~Fr~~D~~q~G 205 (221)
T KOG0037|consen 144 SELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVV------------------LQRLTEAFRRRDTAQQG 205 (221)
T ss_pred HHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHH------------------HHHHHHHHHHhccccce
Confidence 999999999888888899999999999988999999999988876 45567889999999999
Q ss_pred cEee--eecccC
Q psy6668 189 SILC--SISIPR 198 (306)
Q Consensus 189 ~Is~--~efv~~ 198 (306)
.|++ ++|++.
T Consensus 206 ~i~~~y~dfl~~ 217 (221)
T KOG0037|consen 206 SITISYDDFLQM 217 (221)
T ss_pred eEEEeHHHHHHH
Confidence 7665 788764
No 17
>KOG4223|consensus
Probab=99.13 E-value=1.8e-10 Score=105.16 Aligned_cols=129 Identities=13% Similarity=0.131 Sum_probs=102.5
Q ss_pred HHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChH-----HHHH
Q psy6668 65 IQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEE-----EKLR 128 (306)
Q Consensus 65 l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~e-----e~l~ 128 (306)
-.++|+.-+.+++|.++++||..+ ..+..-+.-+|+|+||+|+++||+.-|........+ .+-.
T Consensus 165 De~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere 244 (325)
T KOG4223|consen 165 DEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTERE 244 (325)
T ss_pred HHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHH
Confidence 346888889999999999999998 466777888999999999999999988765432111 1234
Q ss_pred HHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccCCCccccC
Q psy6668 129 WIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPRSPYSLVP 205 (306)
Q Consensus 129 ~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~~p~ll~~ 205 (306)
..|..+|+|++|+++.+|++..+.-- .....+.++..++-+.|.|+||++|++|.+.+--+++.+
T Consensus 245 ~F~~~~DknkDG~L~~dEl~~WI~P~------------~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d~FvgS 309 (325)
T KOG4223|consen 245 QFFEFRDKNKDGKLDGDELLDWILPS------------EQDHAKAEARHLLHEADEDKDGKLSKEEILEHYDVFVGS 309 (325)
T ss_pred HHHHHhhcCCCCccCHHHHhcccCCC------------CccHHHHHHHHHhhhhccCccccccHHHHhhCcceeeee
Confidence 77888999999999999999665421 123458899999999999999999999998776666543
No 18
>PTZ00184 calmodulin; Provisional
Probab=99.11 E-value=1e-09 Score=90.23 Aligned_cols=109 Identities=14% Similarity=0.212 Sum_probs=92.7
Q ss_pred ccccccccCCCCCCCHHHHHHHHH-------------HHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhC
Q psy6668 44 FIAYPFESTRRGSGNGKNITFIQQ-------------QKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLD 99 (306)
Q Consensus 44 ~l~~~fD~~~dg~~s~~El~~l~~-------------~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D 99 (306)
..+..+|.+++|.++..|+..++. .|..++.+++|.|+.++|..+ ..+..+|..+|
T Consensus 15 ~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D 94 (149)
T PTZ00184 15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFD 94 (149)
T ss_pred HHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhC
Confidence 345567999999999999986543 355567788999999999986 35788999999
Q ss_pred CCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHH
Q psy6668 100 HNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 100 ~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~ 152 (306)
.+++|.|+.+||..++..+......+.+..+|+.+|.+++|.|+.+||..++.
T Consensus 95 ~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 95 RDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred CCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 99999999999999998776566788899999999999999999999988764
No 19
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.06 E-value=1.5e-10 Score=82.97 Aligned_cols=64 Identities=20% Similarity=0.259 Sum_probs=54.5
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+++.+|+.||.|++|+|+.+||..+++.++... ......+.+..+|+.+|.|+||.|+|.||+.
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~--------~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDM--------SDEESDEMIDQIFREFDTDGDGRISFDEFLN 64 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHS--------THHHHHHHHHHHHHHHTTTSSSSEEHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccc--------cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhc
Confidence 478999999999999999999999999854222 1345678899999999999999999999864
No 20
>KOG2562|consensus
Probab=99.05 E-value=9.7e-10 Score=104.48 Aligned_cols=139 Identities=14% Similarity=0.103 Sum_probs=115.3
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-------HHHHHHHH----HhCCCCCCcccHHHHHHHHHHhccCChH
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-------RYAHYVFN----TLDHNKTGFLNFEDFVKGLSILCRGSEE 124 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-------~~~~~lF~----~~D~d~dG~I~feEF~~~l~~~~~~~~e 124 (306)
.||.+....+|.+|..+|++.+|.|+++++..+ ..++++|. .+-...+|+|+|++|+.++-........
T Consensus 271 ~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~ 350 (493)
T KOG2562|consen 271 YFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTP 350 (493)
T ss_pred heeHHHHHHHHHHHhhhccccccccCHHHHHHHhccchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCc
Confidence 467777777889999999999999999999998 78999999 3344568999999999999888877888
Q ss_pred HHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.-++..|+.+|.+++|.|+.+|+..+.......+-... +..-..++.+.++++.+-+...++|+++++..
T Consensus 351 ~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~---~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 351 ASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMG---QEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred cchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcC---CCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 89999999999999999999999999888765552211 12223478888999999888899999977765
No 21
>PLN02964 phosphatidylserine decarboxylase
Probab=99.02 E-value=1.7e-09 Score=108.97 Aligned_cols=98 Identities=18% Similarity=0.158 Sum_probs=85.6
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCCh
Q psy6668 55 GSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE 123 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ 123 (306)
..|+.+|++.+++.|..+|++++|.| ...+... .+++++|+.+|.|++|.|+|+||+.++..+.....
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~s 213 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV-VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVA 213 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCC
Confidence 46889999999999999999999987 2222221 24789999999999999999999999998766678
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+++++.+|+.||.|++|+|+.+||..++..
T Consensus 214 eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 214 ANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 889999999999999999999999999988
No 22
>KOG4223|consensus
Probab=99.01 E-value=2.8e-09 Score=97.47 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=102.7
Q ss_pred HHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc----------C--
Q psy6668 64 FIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR----------G-- 121 (306)
Q Consensus 64 ~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~----------~-- 121 (306)
++...+..++.+++|.|+..++... ....+-|..+|.|++|.|+|+|+...+..... .
T Consensus 78 rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~ 157 (325)
T KOG4223|consen 78 RLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEE 157 (325)
T ss_pred HHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHH
Confidence 4566677778888999999999887 56667788899999999999999887764310 0
Q ss_pred --ChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC-
Q psy6668 122 --SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR- 198 (306)
Q Consensus 122 --~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~- 198 (306)
..-.+-+.-|+.-|.|++|.++++||..+|.- +....+..-.+.+.+..+|.|+||+|+++||+.-
T Consensus 158 ~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHP-----------Ee~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~ 226 (325)
T KOG4223|consen 158 YKKMIARDEERFKAADQDGDGSLTLEEFTAFLHP-----------EEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDL 226 (325)
T ss_pred HHHHHHHHHHHHhhcccCCCCcccHHHHHhccCh-----------hhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHH
Confidence 01123467899999999999999999988763 2233456778899999999999999999999861
Q ss_pred --------CCccccCC
Q psy6668 199 --------SPYSLVPE 206 (306)
Q Consensus 199 --------~p~ll~~~ 206 (306)
.|+++.++
T Consensus 227 ~~~~~~~~epeWv~~E 242 (325)
T KOG4223|consen 227 YSHEGNEEEPEWVLTE 242 (325)
T ss_pred hhccCCCCCccccccc
Confidence 36666665
No 23
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.87 E-value=5e-09 Score=74.98 Aligned_cols=61 Identities=30% Similarity=0.550 Sum_probs=52.7
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccC----ChHHHHHHHhhhhccCCCCcccHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRG----SEEEKLRWIFCLYDINGDGVISKDDLYNIV 151 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~----~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l 151 (306)
++++|..+|.|++|.|+.+||..++..+... ...+.+..+|+.+|.|++|.|+.+||..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 5679999999999999999999999987642 344567788999999999999999998764
No 24
>KOG0044|consensus
Probab=98.87 E-value=1.4e-08 Score=88.03 Aligned_cols=101 Identities=16% Similarity=0.183 Sum_probs=83.3
Q ss_pred CCCCCCHHHHHHHHHH--------------HhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccH
Q psy6668 53 RRGSGNGKNITFIQQQ--------------KDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNF 108 (306)
Q Consensus 53 ~dg~~s~~El~~l~~~--------------F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~f 108 (306)
..|.++.++.+.+|.. |..+|.+++|+|+..||..+ +-+...|+.||.|++|.|++
T Consensus 40 P~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~ 119 (193)
T KOG0044|consen 40 PSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITK 119 (193)
T ss_pred CCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcH
Confidence 4677888888776654 45568889999999998776 56667799999999999999
Q ss_pred HHHHHHHHHhcc-----------CChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 109 EDFVKGLSILCR-----------GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 109 eEF~~~l~~~~~-----------~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+|++.++..+.. ...++....+|+.+|.|+||.||.+||...++.
T Consensus 120 ~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 120 EEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred HHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 999988775432 135678999999999999999999999988876
No 25
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.85 E-value=2.8e-09 Score=81.38 Aligned_cols=61 Identities=8% Similarity=0.073 Sum_probs=53.6
Q ss_pred HHHHHhhhhcc-CCCCcccHHHHHHHHHH-HHHHhccccccccChhhHH-HHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 126 KLRWIFCLYDI-NGDGVISKDDLYNIVSS-VYELMGTYAYRAFDSGMVA-QRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 126 ~l~~~F~l~D~-d~dG~Is~eEl~~~l~~-~~~~~g~~~~~~~~~~~~~-~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
.++.+|+.||. +++|+|+..||+.+++. ++..+ .. +.++.+|+.+|.|+||.|+|++|+..
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l------------s~~~~v~~mi~~~D~d~DG~I~F~EF~~l 72 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL------------KDVEGLEEKMKNLDVNQDSKLSFEEFWEL 72 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc------------cCHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 57899999999 99999999999999998 55433 13 78999999999999999999999764
No 26
>KOG0034|consensus
Probab=98.82 E-value=3e-08 Score=85.79 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=88.4
Q ss_pred cccccccC-CCCCCCHHHHHHHHH---------HHhccCCCCCCc-ccHHHHHhH-----------HHHHHHHHHhCCCC
Q psy6668 45 IAYPFEST-RRGSGNGKNITFIQQ---------QKDNNCLAGGRC-DHKLDIKQI-----------RYAHYVFNTLDHNK 102 (306)
Q Consensus 45 l~~~fD~~-~dg~~s~~El~~l~~---------~F~~~d~~~~G~-I~~~eF~~~-----------~~~~~lF~~~D~d~ 102 (306)
.++.++.+ ++|.++.+|+..+.. .+..++++++|. |+.++|... .-++=.|+.||.++
T Consensus 38 rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~ 117 (187)
T KOG0034|consen 38 RFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDG 117 (187)
T ss_pred HHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCC
Confidence 44557777 899999999987552 344456666777 999999998 35666899999999
Q ss_pred CCcccHHHHHHHHHHhccC-Ch------HHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 103 TGFLNFEDFVKGLSILCRG-SE------EEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 103 dG~I~feEF~~~l~~~~~~-~~------ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+|.|+.+|+..++..+... .. ++.+...|..+|.|+||+|+.+||++++..
T Consensus 118 ~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 118 DGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred CCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 9999999999999987652 22 345778999999999999999999999876
No 27
>KOG0028|consensus
Probab=98.81 E-value=4.8e-08 Score=81.01 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=97.4
Q ss_pred ccccccccccCCCCCCCHHHHHHHHH-------------HHhccCCCCCCcccHHHHHhH-----------HHHHHHHHH
Q psy6668 42 CKFIAYPFESTRRGSGNGKNITFIQQ-------------QKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNT 97 (306)
Q Consensus 42 ~~~l~~~fD~~~dg~~s~~El~~l~~-------------~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~ 97 (306)
.+-.+.+||.+..|.+..+||+...+ .....+.++.|.|+.++|... ..+...|+.
T Consensus 35 i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl 114 (172)
T KOG0028|consen 35 IKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRL 114 (172)
T ss_pred HHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHc
Confidence 33466778999999999999965443 333346677899999999987 789999999
Q ss_pred hCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 98 LDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 98 ~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+|.|++|.|++.+|+.....+.....+++++.+.+-+|.|++|-|+.+||..+++.
T Consensus 115 ~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 115 FDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred ccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 99999999999999999999888889999999999999999999999999988764
No 28
>KOG0377|consensus
Probab=98.73 E-value=5.6e-08 Score=92.05 Aligned_cols=126 Identities=10% Similarity=0.025 Sum_probs=92.9
Q ss_pred HHHHHhccCCCCCCcccHHHHHhH---------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc--C----------Ch
Q psy6668 65 IQQQKDNNCLAGGRCDHKLDIKQI---------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR--G----------SE 123 (306)
Q Consensus 65 l~~~F~~~d~~~~G~I~~~eF~~~---------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~--~----------~~ 123 (306)
+.+.|...|+.++|.|+......+ ++.-.-=+....+.+|.+.|.+.+..+..-.. . -.
T Consensus 466 L~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetLYr~ 545 (631)
T KOG0377|consen 466 LEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETLYRN 545 (631)
T ss_pred HHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHHHhc
Confidence 445677788888888888887776 11111112233445678888887766543110 0 11
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
...+..+|+.+|.|++|.|+.+||+.+++-+...+...++ +..+.++-+.+|.|+||+|++.||+..
T Consensus 546 ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~--------~~~i~~la~~mD~NkDG~IDlNEfLeA 612 (631)
T KOG0377|consen 546 KSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAIS--------DDEILELARSMDLNKDGKIDLNEFLEA 612 (631)
T ss_pred hhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcC--------HHHHHHHHHhhccCCCCcccHHHHHHH
Confidence 2347789999999999999999999999998888876655 888999999999999999999999874
No 29
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.72 E-value=1.8e-08 Score=77.55 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=52.7
Q ss_pred HHHHHhhhhc-cCCCC-cccHHHHHHHHHHH-HHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 126 KLRWIFCLYD-INGDG-VISKDDLYNIVSSV-YELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 126 ~l~~~F~l~D-~d~dG-~Is~eEl~~~l~~~-~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
.+..+|..|| .|++| +|+.+||+.++... +..++.. .....++++++.+|.|+||.|+|++|+..
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~--------~~~~~v~~i~~elD~n~dG~Idf~EF~~l 78 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQ--------KDPMLVDKIMNDLDSNKDNEVDFNEFVVL 78 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccc--------cCHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 5788899999 78998 59999999999873 3322221 13678999999999999999999999863
No 30
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.67 E-value=3.6e-08 Score=75.60 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=54.8
Q ss_pred HHHHHHHhhhhc-cCCCCc-ccHHHHHHHHHH-HHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 124 EEKLRWIFCLYD-INGDGV-ISKDDLYNIVSS-VYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 124 ee~l~~~F~l~D-~d~dG~-Is~eEl~~~l~~-~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.+.++.+|+.|| .|++|+ |+.+||+.+|+. ++..++... ..+.++.+|+.+|.|++|.|+|.+|+.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~--------s~~~v~~i~~~~D~d~~G~I~f~eF~~ 76 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQK--------DADAVDKIMKELDENGDGEVDFQEFVV 76 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCC--------CHHHHHHHHHHHCCCCCCcCcHHHHHH
Confidence 357899999997 999995 999999999985 554333211 378899999999999999999999976
No 31
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.65 E-value=2.6e-08 Score=75.94 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=52.5
Q ss_pred HHHHHhhhhc-cCCCC-cccHHHHHHHHHHHHH-HhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYD-INGDG-VISKDDLYNIVSSVYE-LMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D-~d~dG-~Is~eEl~~~l~~~~~-~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.++.+|+.|| .|++| +|+.+||+.+|+.-.. .+|... .++.++.+++.+|.|+||.|+|++|+.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~--------~~~~v~~~i~~~D~n~dG~v~f~eF~~ 75 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIK--------EQEVVDKVMETLDSDGDGECDFQEFMA 75 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCC--------CHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 6889999998 79999 5999999999997211 123211 378899999999999999999999975
No 32
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.61 E-value=6.2e-08 Score=74.64 Aligned_cols=65 Identities=14% Similarity=0.208 Sum_probs=53.9
Q ss_pred HHHHHHhhhhcc-CC-CCcccHHHHHHHHHH-HHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDI-NG-DGVISKDDLYNIVSS-VYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~-d~-dG~Is~eEl~~~l~~-~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..++.+|..||. |+ +|+|+.+||+.+++. .+..+|... ..+.++.+++.+|.|++|.|+|.+|+.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~--------s~~ei~~~~~~~D~~~dg~I~f~eF~~ 75 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQK--------DPMAVDKIMKDLDQNRDGKVNFEEFVS 75 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccc--------cHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 468899999997 97 699999999999986 443343322 378899999999999999999999975
No 33
>KOG0036|consensus
Probab=98.58 E-value=1.9e-07 Score=87.96 Aligned_cols=119 Identities=12% Similarity=0.046 Sum_probs=103.2
Q ss_pred CCCCCCCccccccccccCCCCCCCHHHHHHHH--------------HHHhccCCCCCCcccHHHHHhH-----HHHHHHH
Q psy6668 35 LPDIPFDCKFIAYPFESTRRGSGNGKNITFIQ--------------QQKDNNCLAGGRCDHKLDIKQI-----RYAHYVF 95 (306)
Q Consensus 35 ~~~i~~~~~~l~~~fD~~~dg~~s~~El~~l~--------------~~F~~~d~~~~G~I~~~eF~~~-----~~~~~lF 95 (306)
.++...+.+.++..+|.+++|.++..++...+ ..|...+.+.+|.++.++|..+ ..+.++|
T Consensus 9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~~~F 88 (463)
T KOG0036|consen 9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELYRIF 88 (463)
T ss_pred cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHHHHH
Confidence 34445556678888999999999999998533 3566678889999999999998 6778899
Q ss_pred HHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 96 NTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 96 ~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
..+|.+.||.|+-.|....+..+...-.++++..+|+..|+++++.|+.+|++..+..
T Consensus 89 ~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 89 QSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred hhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 9999999999999999999998888888899999999999999999999999988764
No 34
>PLN02964 phosphatidylserine decarboxylase
Probab=98.47 E-value=5.1e-07 Score=91.26 Aligned_cols=93 Identities=16% Similarity=0.183 Sum_probs=72.9
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-cCChHHH---HHHHhhhhccCCCCcccHHHHHHHHHHHHHHhcccccc
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEK---LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR 164 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~-~~~~ee~---l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~ 164 (306)
..+.+.|..+|.|++|.| +-.++..+. ....+++ ++.+|+.+|.|++|.|+.+||..++..++ ..
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg----~~--- 211 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG----NL--- 211 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc----cC---
Confidence 356778999999999997 333444443 2333443 89999999999999999999999998642 21
Q ss_pred ccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 165 AFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 165 ~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..++++..+|+.+|.|++|.|+++++..
T Consensus 212 -----~seEEL~eaFk~fDkDgdG~Is~dEL~~ 239 (644)
T PLN02964 212 -----VAANKKEELFKAADLNGDGVVTIDELAA 239 (644)
T ss_pred -----CCHHHHHHHHHHhCCCCCCcCCHHHHHH
Confidence 1377899999999999999999987755
No 35
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.46 E-value=8.4e-07 Score=60.85 Aligned_cols=61 Identities=21% Similarity=0.390 Sum_probs=55.3
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 151 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l 151 (306)
+..+|..+|.+++|.|+++||..++..+......+.+..+|+.+|.+++|.|+.+||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4568999999999999999999999988777888899999999999999999999998764
No 36
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.46 E-value=2.1e-07 Score=74.53 Aligned_cols=59 Identities=20% Similarity=0.174 Sum_probs=48.6
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
....+.++|..+|.|+||+|+.+||..+.. .. .+..+..+|+.+|.|+||.||+.||..
T Consensus 46 ~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l-----~~-----------~e~~~~~f~~~~D~n~Dg~IS~~Ef~~ 104 (116)
T cd00252 46 CKDPVGWMFNQLDGNYDGKLSHHELAPIRL-----DP-----------NEHCIKPFFESCDLDKDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHHHCCCCCCcCCHHHHHHHHc-----cc-----------hHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 345789999999999999999999997651 11 267788999999999999999988754
No 37
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.44 E-value=3.2e-07 Score=69.93 Aligned_cols=63 Identities=16% Similarity=0.231 Sum_probs=52.0
Q ss_pred HHHHHhhhhcc-CC-CCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDI-NG-DGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~-d~-dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.+-.+|..||. |+ +|+|+.+||+.+++.... +|... ..++++++|+.+|.|+||+|+|++|+.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~-lg~k~--------t~~ev~~m~~~~D~d~dG~Idf~EFv~ 75 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELT-IGSKL--------QDAEIAKLMEDLDRNKDQEVNFQEYVT 75 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh-cCCCC--------CHHHHHHHHHHhcCCCCCCCcHHHHHH
Confidence 46789999998 77 899999999999975211 34333 388999999999999999999999975
No 38
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.42 E-value=4.2e-07 Score=68.88 Aligned_cols=65 Identities=11% Similarity=0.128 Sum_probs=53.2
Q ss_pred HHHHHHhhhhcc--CCCCcccHHHHHHHHHH-HHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDI--NGDGVISKDDLYNIVSS-VYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~--d~dG~Is~eEl~~~l~~-~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+.++.+|..||. |++|+|+.+||..+++. ++..++. ......++.++..+|.+++|.|+|++|+.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~--------~~~~~ei~~i~~~~d~~~~g~I~f~eF~~ 75 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKN--------QKDPEAVDKIMKDLDVNKDGKVDFQEFLV 75 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccC--------CCCHHHHHHHHHHhccCCCCcCcHHHHHH
Confidence 468889999999 89999999999999986 3322211 11377899999999999999999999976
No 39
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.42 E-value=1.1e-06 Score=67.84 Aligned_cols=65 Identities=26% Similarity=0.330 Sum_probs=55.0
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 157 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~ 157 (306)
+..+|..+|.+++|.|+++|+..++... +..++.+..+|+.+|.+++|+|+.+||..++..+...
T Consensus 12 l~~~F~~~D~d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~ 76 (96)
T smart00027 12 YEQIFRSLDKNQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK 76 (96)
T ss_pred HHHHHHHhCCCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence 5567888888899999999999988763 3566789999999999999999999999999887653
No 40
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.37 E-value=3.9e-07 Score=64.82 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=49.1
Q ss_pred HHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 128 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 128 ~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+.+|+.+|.|++|+|+.+|+..+++.. |. ..+.++.+|+.+|.+++|.|+|.+|+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~----g~----------~~~~~~~i~~~~d~~~~g~i~~~ef~~ 57 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS----GL----------PRSVLAQIWDLADTDKDGKLDKEEFAI 57 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc----CC----------CHHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 578999999999999999999999874 21 267789999999999999999999875
No 41
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.36 E-value=4.1e-06 Score=64.65 Aligned_cols=64 Identities=13% Similarity=0.094 Sum_probs=58.9
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 119 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~ 119 (306)
.++.+|+..+.+.|..+|.+++|.|+.+++..+ ..+..+|..+|.+++|.|+|+||+.++..+.
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 478899999999999999999999999999998 7789999999999999999999999888654
No 42
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.36 E-value=1.4e-06 Score=59.77 Aligned_cols=52 Identities=33% Similarity=0.512 Sum_probs=46.3
Q ss_pred CCCcccHHHHHHHHHHhccC-ChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 102 KTGFLNFEDFVKGLSILCRG-SEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 102 ~dG~I~feEF~~~l~~~~~~-~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
++|.|+.+||..++..+... ..++.+..+|..+|.|++|+|+.+||..++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 36899999999999766556 77888999999999999999999999998874
No 43
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.36 E-value=2.2e-06 Score=60.86 Aligned_cols=62 Identities=19% Similarity=0.250 Sum_probs=54.0
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 92 HYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 92 ~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
+.+|..+|.+++|.|+.+|+..++.... ...+.++.+|+.+|.+++|.|+.+||..++..+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 4589999999999999999999887653 4677899999999999999999999998887643
No 44
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.32 E-value=2.5e-06 Score=65.12 Aligned_cols=66 Identities=17% Similarity=0.167 Sum_probs=55.6
Q ss_pred HHHHHHHHhCC-CCCCcccHHHHHHHHHH-hccCChH-HHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDH-NKTGFLNFEDFVKGLSI-LCRGSEE-EKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 90 ~~~~lF~~~D~-d~dG~I~feEF~~~l~~-~~~~~~e-e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+...|..||. +++|.|+..||..++.. +...... +.+..+++.+|.|++|.|+.+||..++..+.
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 45668999999 99999999999999987 5433333 7899999999999999999999998888753
No 45
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.31 E-value=6e-06 Score=62.92 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=57.6
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-----hccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLD-HNKTG-FLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 89 ~~~~~lF~~~D-~d~dG-~I~feEF~~~l~~-----~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
..+.++|..|| .+++| .|+.+|+..+|.. +.....++.+..+++.+|.|++|.|+.+||..++..+.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 35667999998 78999 5999999999997 55556778899999999999999999999998888753
No 46
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.30 E-value=1.1e-06 Score=67.13 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=51.9
Q ss_pred HHHHHHhhh-hccCCCC-cccHHHHHHHHHHHHHH-hccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCL-YDINGDG-VISKDDLYNIVSSVYEL-MGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l-~D~d~dG-~Is~eEl~~~l~~~~~~-~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..+..+|+. +|.|++| +|+.+||+.++...+.. ++.. .....++++++.+|.|+||.|+|++|++
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~--------~~~~~~~~ll~~~D~d~DG~I~f~EF~~ 76 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQ--------KDPGVLDRMMKKLDLNSDGQLDFQEFLN 76 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCC--------CCHHHHHHHHHHcCCCCCCcCcHHHHHH
Confidence 367889999 6788876 99999999999985321 1111 1267899999999999999999999986
No 47
>KOG4251|consensus
Probab=98.29 E-value=1.6e-06 Score=76.69 Aligned_cols=144 Identities=12% Similarity=0.059 Sum_probs=102.0
Q ss_pred ccccccccCCCCCCCHHHHHHHHH----------------HHhccCCCCCCcccHHHHHhH-------------------
Q psy6668 44 FIAYPFESTRRGSGNGKNITFIQQ----------------QKDNNCLAGGRCDHKLDIKQI------------------- 88 (306)
Q Consensus 44 ~l~~~fD~~~dg~~s~~El~~l~~----------------~F~~~d~~~~G~I~~~eF~~~------------------- 88 (306)
.++...|.|.++++|..|++++.. .|...|++++|.|+.+||+--
T Consensus 105 viFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairln 184 (362)
T KOG4251|consen 105 VIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLN 184 (362)
T ss_pred HHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhcc
Confidence 356667999999999999987653 355568899999999888653
Q ss_pred ---------------------------------------------------HHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 89 ---------------------------------------------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 89 ---------------------------------------------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
..+..+...+|+|+|..++-.||+.+..-
T Consensus 185 eelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvG 264 (362)
T KOG4251|consen 185 EELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVG 264 (362)
T ss_pred CcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCc
Confidence 45667777788888888888888764431
Q ss_pred hcc----C-----ChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCC
Q psy6668 118 LCR----G-----SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEM 188 (306)
Q Consensus 118 ~~~----~-----~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG 188 (306)
... . ..+++.+..=.++|.|++|.++.+|+..++.-... ......+..++...|.|+|.
T Consensus 265 TVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~------------~~alne~~~~ma~~d~n~~~ 332 (362)
T KOG4251|consen 265 TVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNF------------RLALNEVNDIMALTDANNDE 332 (362)
T ss_pred chhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhh------------hhhHHHHHHHHhhhccCCCc
Confidence 110 1 12334556667788899999999888877554321 22467778888888889998
Q ss_pred cEeeeecccCC
Q psy6668 189 SILCSISIPRS 199 (306)
Q Consensus 189 ~Is~~efv~~~ 199 (306)
++++++.+.+.
T Consensus 333 ~Ls~eell~r~ 343 (362)
T KOG4251|consen 333 KLSLEELLERD 343 (362)
T ss_pred ccCHHHHHHHH
Confidence 88887776654
No 48
>KOG0031|consensus
Probab=98.29 E-value=8.1e-06 Score=67.51 Aligned_cols=109 Identities=10% Similarity=0.074 Sum_probs=96.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHhccCCC---------CCCcccHHHHHhH-----------HHHHHHHHHhCCCCCC
Q psy6668 45 IAYPFESTRRGSGNGKNITFIQQQKDNNCLA---------GGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTG 104 (306)
Q Consensus 45 l~~~fD~~~dg~~s~~El~~l~~~F~~~d~~---------~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG 104 (306)
-+.++|.|+||.|..++|+..+....+..++ ..|.|+.--|..+ ..+..-|+.||.+++|
T Consensus 37 AF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~G 116 (171)
T KOG0031|consen 37 AFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAPGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGSG 116 (171)
T ss_pred HHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCCC
Confidence 4566899999999999999999887765432 3689999999887 6778899999999999
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 105 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 105 ~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.|.-+.+..+|......-.++++..+|+.+=.|..|.|+..+|..+++.
T Consensus 117 ~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ith 165 (171)
T KOG0031|consen 117 KIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITH 165 (171)
T ss_pred ccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence 9999999999998887888999999999999999999999999998883
No 49
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.28 E-value=6.6e-06 Score=62.98 Aligned_cols=69 Identities=17% Similarity=0.201 Sum_probs=57.1
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHH-hc----cCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLD-HNKTG-FLNFEDFVKGLSI-LC----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 157 (306)
Q Consensus 89 ~~~~~lF~~~D-~d~dG-~I~feEF~~~l~~-~~----~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~ 157 (306)
..+.+.|..|| .+++| .|+..|+..++.. +. ....++.++.+|+.+|.|++|.|+.+||..++..+...
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~~ 84 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTVA 84 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHH
Confidence 45677999996 99999 5999999999974 32 13467789999999999999999999999998876433
No 50
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.27 E-value=6.3e-06 Score=63.41 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=55.1
Q ss_pred HHHHHHHHHhC-CCCCC-cccHHHHHHHHHHh-----ccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLD-HNKTG-FLNFEDFVKGLSIL-----CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 89 ~~~~~lF~~~D-~d~dG-~I~feEF~~~l~~~-----~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
..+.++|..|| .|++| .|+..|+..++... ........+..+++.+|.|++|.|+.+||..++..+.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 34566899998 67898 59999999999763 2234667899999999999999999999999988763
No 51
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.27 E-value=1.6e-06 Score=59.44 Aligned_cols=59 Identities=25% Similarity=0.290 Sum_probs=50.6
Q ss_pred HHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 127 LRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 127 l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
++.+|..+|.+++|.|+.+|+..+++..+ ... ..+.+..+|..+|.+++|.|++++|+.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~----~~~--------~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG----EGL--------SEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC----CCC--------CHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 57889999999999999999999998743 222 378888999999999999999998864
No 52
>KOG2643|consensus
Probab=98.27 E-value=1.3e-05 Score=76.29 Aligned_cols=136 Identities=16% Similarity=0.113 Sum_probs=100.7
Q ss_pred ccccCCCCCCCHHHHHHHHH-----------HHhccCCCCCCcccHHHHHhH--------------------------HH
Q psy6668 48 PFESTRRGSGNGKNITFIQQ-----------QKDNNCLAGGRCDHKLDIKQI--------------------------RY 90 (306)
Q Consensus 48 ~fD~~~dg~~s~~El~~l~~-----------~F~~~d~~~~G~I~~~eF~~~--------------------------~~ 90 (306)
++++...|-||..|.--+.. +|+.+|.|+||.|+++||... ..
T Consensus 207 F~~lg~~GLIsfSdYiFLlTlLS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~ 286 (489)
T KOG2643|consen 207 FYKLGESGLISFSDYIFLLTLLSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEV 286 (489)
T ss_pred EEEcCCCCeeeHHHHHHHHHHHccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhh
Confidence 36888899999999766543 678889999999999999886 11
Q ss_pred HH-HHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChh
Q psy6668 91 AH-YVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSG 169 (306)
Q Consensus 91 ~~-~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~ 169 (306)
.. .+...|..+++++++++||+.++..+. ++-++.-|..+|...+|.|+..+|..+|-.+- +.+ .+
T Consensus 287 nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a---~~n------~~ 353 (489)
T KOG2643|consen 287 NSALLTYFFGKRGNGKLSIDEFLKFQENLQ----EEILELEFERFDKGDSGAISEVDFAELLLAYA---GVN------SK 353 (489)
T ss_pred hhhHHHHhhccCCCccccHHHHHHHHHHHH----HHHHHHHHHHhCcccccccCHHHHHHHHHHHc---ccc------hH
Confidence 11 234457889999999999999998754 56778889999999999999999999888742 111 11
Q ss_pred hHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 170 MVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 170 ~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
......+..-++++.+ +-.||++||..
T Consensus 354 ~k~~~lkrvk~kf~~~-~~gISl~Ef~~ 380 (489)
T KOG2643|consen 354 KKHKYLKRVKEKFKDD-GKGISLQEFKA 380 (489)
T ss_pred hHHHHHHHHHHhccCC-CCCcCHHHHHH
Confidence 1234556666666655 56788866654
No 53
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.25 E-value=6.5e-06 Score=63.30 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=55.6
Q ss_pred HHHHHHHHhCC-CC-CCcccHHHHHHHHHH-----hccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDH-NK-TGFLNFEDFVKGLSI-----LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 90 ~~~~lF~~~D~-d~-dG~I~feEF~~~l~~-----~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+...|..||. |+ +|.|+.+|+..++.. +.....++.+..+|+.+|.|++|.|+.+||..++....
T Consensus 9 ~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~ 81 (94)
T cd05031 9 SLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS 81 (94)
T ss_pred HHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 46668999997 87 699999999999875 22345678899999999999999999999999888753
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.21 E-value=5.5e-06 Score=66.38 Aligned_cols=60 Identities=25% Similarity=0.308 Sum_probs=52.2
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~ 152 (306)
..+..+|..+|.|+||.|+.+|+..+. ....+..+..+|..+|.|++|+||.+||...+.
T Consensus 48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 48 DPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 567889999999999999999998765 234567788999999999999999999998884
No 55
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.20 E-value=1.6e-06 Score=51.96 Aligned_cols=27 Identities=26% Similarity=0.512 Sum_probs=18.8
Q ss_pred HHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 127 LRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 127 l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
++.+|+.||+|+||+|+.+||..+++.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 566777777777777777777776654
No 56
>KOG0751|consensus
Probab=98.15 E-value=1.8e-05 Score=76.20 Aligned_cols=144 Identities=17% Similarity=0.159 Sum_probs=105.6
Q ss_pred ccCCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH------------HHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 50 ESTRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 50 D~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
+...-..-..+||..++-+|...+.++...++.++|... ...+.+-..-|.-+||.|+|+||+.+-..
T Consensus 23 ~v~~lkra~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~ 102 (694)
T KOG0751|consen 23 KVELLKRADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESV 102 (694)
T ss_pred cHHhhccCChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhh
Confidence 334444556888888888888888888889999999876 34444445567888999999999988777
Q ss_pred hccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhcccccc-----------------------ccChhhHHHH
Q psy6668 118 LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYR-----------------------AFDSGMVAQR 174 (306)
Q Consensus 118 ~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~-----------------------~~~~~~~~~~ 174 (306)
+| .++...+.+|.+||+.++|.++.+++..++....-......+- ..-.+...+.
T Consensus 103 lC--~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~ 180 (694)
T KOG0751|consen 103 LC--APDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEH 180 (694)
T ss_pred cc--CchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHH
Confidence 66 4467788999999999999999999999988642111110000 0012333567
Q ss_pred HHHHHHHhCCCCCCcEeeeec
Q psy6668 175 VEYLFQVSTKGFEMSILCSIS 195 (306)
Q Consensus 175 v~~lf~~~D~d~DG~Is~~ef 195 (306)
..+.|++.|..++|.||--.|
T Consensus 181 ~~qafr~~d~~~ng~is~Ldf 201 (694)
T KOG0751|consen 181 AEQAFREKDKAKNGFISVLDF 201 (694)
T ss_pred HHHHHHHhcccCCCeeeeech
Confidence 888999999999999987333
No 57
>KOG2643|consensus
Probab=98.15 E-value=6e-06 Score=78.53 Aligned_cols=137 Identities=10% Similarity=0.125 Sum_probs=90.8
Q ss_pred cccccccCCCCCCCHHHHHHHHH---------HHhccCCCCCCcccHHHHHhH-------------HHHHHHHHHhCCCC
Q psy6668 45 IAYPFESTRRGSGNGKNITFIQQ---------QKDNNCLAGGRCDHKLDIKQI-------------RYAHYVFNTLDHNK 102 (306)
Q Consensus 45 l~~~fD~~~dg~~s~~El~~l~~---------~F~~~d~~~~G~I~~~eF~~~-------------~~~~~lF~~~D~d~ 102 (306)
..++|..+.++.++.+|..+.++ .|..+++..+|.|+..+|..+ ..++++-+.++.+
T Consensus 291 ~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~- 369 (489)
T KOG2643|consen 291 LTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD- 369 (489)
T ss_pred HHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-
Confidence 44567777778888777766443 455566666678888888776 3566666666655
Q ss_pred CCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHh
Q psy6668 103 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 182 (306)
Q Consensus 103 dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~ 182 (306)
+-.|+++||..+..-+..-..-+.....|. .-++.|+..+|+++...+ .|..++ +..++-+|..+
T Consensus 370 ~~gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~----~Ag~~i~~~~f~raa~~v---tGveLS--------dhVvdvvF~IF 434 (489)
T KOG2643|consen 370 GKGISLQEFKAFFRFLNNLNDFDIALRFYH----MAGASIDEKTFQRAAKVV---TGVELS--------DHVVDVVFTIF 434 (489)
T ss_pred CCCcCHHHHHHHHHHHhhhhHHHHHHHHHH----HcCCCCCHHHHHHHHHHh---cCcccc--------cceeeeEEEEE
Confidence 345888887776664433222222222222 245678888887777763 454333 56788899999
Q ss_pred CCCCCCcEeeeeccc
Q psy6668 183 TKGFEMSILCSISIP 197 (306)
Q Consensus 183 D~d~DG~Is~~efv~ 197 (306)
|.|+||.||++||+.
T Consensus 435 D~N~Dg~LS~~EFl~ 449 (489)
T KOG2643|consen 435 DENNDGTLSHKEFLA 449 (489)
T ss_pred ccCCCCcccHHHHHH
Confidence 999999999999986
No 58
>KOG4666|consensus
Probab=98.14 E-value=1.5e-06 Score=79.65 Aligned_cols=122 Identities=21% Similarity=0.238 Sum_probs=98.1
Q ss_pred CCCcccHHHHHhH------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHhhhhccCCCCcccHHHHH
Q psy6668 76 GGRCDHKLDIKQI------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISKDDLY 148 (306)
Q Consensus 76 ~~G~I~~~eF~~~------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~l~D~d~dG~Is~eEl~ 148 (306)
+.+.|.-.+|... ..+..+|..||.+++|.++|.|.+..++.++. ....+.++.+|+.|+.+-||++...+|.
T Consensus 240 kg~~igi~efa~~l~vpvsd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls 319 (412)
T KOG4666|consen 240 KGPDIGIVEFAVNLRVPVSDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILS 319 (412)
T ss_pred cCCCcceeEeeeeeecchhhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHH
Confidence 3446666666554 67788999999999999999999999998887 5667889999999999999999999999
Q ss_pred HHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeee---ecccCCCccccCCCCCC
Q psy6668 149 NIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCS---ISIPRSPYSLVPEGGEG 210 (306)
Q Consensus 149 ~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~---efv~~~p~ll~~~~~~~ 210 (306)
-+++.. .|. ..-.+-.+|..++...||+|+|. .|....|.+...+-+--
T Consensus 320 ~ilq~~---lgv----------~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a~~~~~yl 371 (412)
T KOG4666|consen 320 LILQVV---LGV----------EVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPNLALSELGYL 371 (412)
T ss_pred HHHHHh---cCc----------ceeeccccchhhhcccCcceeHHHHHHHHHhCchhhhhhhccc
Confidence 998874 333 24456778999999999999994 55557888876554433
No 59
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.12 E-value=3.2e-06 Score=57.95 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=40.8
Q ss_pred CCCcccHHHHHHHHHHHHHHhccc-cccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 138 GDGVISKDDLYNIVSSVYELMGTY-AYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 138 ~dG~Is~eEl~~~l~~~~~~~g~~-~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.+|+|+.+||+.+|.. +|.. . ..+++..+|..+|.|++|.|+|.+|+.
T Consensus 1 ~~G~i~~~~~~~~l~~----~g~~~~--------s~~e~~~l~~~~D~~~~G~I~~~EF~~ 49 (54)
T PF13833_consen 1 KDGKITREEFRRALSK----LGIKDL--------SEEEVDRLFREFDTDGDGYISFDEFIS 49 (54)
T ss_dssp SSSEEEHHHHHHHHHH----TTSSSS--------CHHHHHHHHHHHTTSSSSSEEHHHHHH
T ss_pred CcCEECHHHHHHHHHH----hCCCCC--------CHHHHHHHHHhcccCCCCCCCHHHHHH
Confidence 4799999999999965 3443 3 378899999999999999999999975
No 60
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.10 E-value=1.9e-05 Score=59.71 Aligned_cols=65 Identities=15% Similarity=0.186 Sum_probs=53.9
Q ss_pred HHHHHHHHhCC--CCCCcccHHHHHHHHHHh-cc----CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDH--NKTGFLNFEDFVKGLSIL-CR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 90 ~~~~lF~~~D~--d~dG~I~feEF~~~l~~~-~~----~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
.+..+|..+|. +++|.|+.+||..++... .. ....+.+..+|+.+|.+++|.|+.+||..++...
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 35568899999 899999999999998752 21 2347789999999999999999999999988864
No 61
>KOG0377|consensus
Probab=98.08 E-value=1.4e-05 Score=76.14 Aligned_cols=127 Identities=14% Similarity=0.165 Sum_probs=83.1
Q ss_pred CchhHHHHhhcccccccccCcceeeeeccCCCCCCCCCccccccccccCCCCCCCHHHHHHHHHHHhccCCCCCCcccHH
Q psy6668 4 LCFPVTIIRTLKLSNMINGSELVCRVKYNNTLPDIPFDCKFIAYPFESTRRGSGNGKNITFIQQQKDNNCLAGGRCDHKL 83 (306)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~~ell~rv~~~~~~~~i~~~~~~l~~~fD~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~ 83 (306)
-|++|+.|..++|+|...+.++.--...+. +..+.. ++.-..+.+..+--..+.+......
T Consensus 486 Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~------v~Y~~~---~~~l~~e~~~~ea~~slvetLYr~k---------- 546 (631)
T KOG0377|consen 486 WAKCMENITGLNLPWRLLRPKLANGSDDGK------VEYKST---LDNLDTEVILEEAGSSLVETLYRNK---------- 546 (631)
T ss_pred HHHHHHHHhcCCCcHHHhhhhccCCCcCcc------eehHhH---HHHhhhhhHHHHHHhHHHHHHHhch----------
Confidence 378999999999999998777743211110 000000 0111111121111112222222211
Q ss_pred HHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc----CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 84 DIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR----GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 84 eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~----~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
..++.+|+.+|.|++|.|+.+||..++..+.. .-.++.+..+=+.+|.|+||.|+.+||.++++-.
T Consensus 547 -----s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 547 -----SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred -----hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 35677999999999999999999998886643 4567788888999999999999999999988753
No 62
>KOG4251|consensus
Probab=98.07 E-value=2e-05 Score=69.84 Aligned_cols=127 Identities=9% Similarity=0.005 Sum_probs=92.4
Q ss_pred HHHHHHHhccCCCCCCcccHHHHHhH-------------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHH----
Q psy6668 63 TFIQQQKDNNCLAGGRCDHKLDIKQI-------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE---- 125 (306)
Q Consensus 63 ~~l~~~F~~~d~~~~G~I~~~eF~~~-------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee---- 125 (306)
..+...|.+.|.+.+|.|+..|+++. ...+..|...|+|+||.|.++||..-+......+..+
T Consensus 101 rklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevada 180 (362)
T KOG4251|consen 101 RKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADA 180 (362)
T ss_pred HHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHH
Confidence 34677888889999999999999987 4555678889999999999999976555433222111
Q ss_pred ----------HHHHHhhhhccCCCCcccH---------HHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCC
Q psy6668 126 ----------KLRWIFCLYDINGDGVISK---------DDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGF 186 (306)
Q Consensus 126 ----------~l~~~F~l~D~d~dG~Is~---------eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~ 186 (306)
.-.+.|..-++++.|..+. +||..+|.--+.. .+....++++...+|.|+
T Consensus 181 irlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSr-----------gmLrfmVkeivrdlDqdg 249 (362)
T KOG4251|consen 181 IRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSR-----------GMLRFMVKEIVRDLDQDG 249 (362)
T ss_pred hhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhh-----------hhHHHHHHHHHHHhccCC
Confidence 1223455556666666655 8887777654322 335788999999999999
Q ss_pred CCcEeeeecccCCC
Q psy6668 187 EMSILCSISIPRSP 200 (306)
Q Consensus 187 DG~Is~~efv~~~p 200 (306)
|..+|-.+|+..-+
T Consensus 250 DkqlSvpeFislpv 263 (362)
T KOG4251|consen 250 DKQLSVPEFISLPV 263 (362)
T ss_pred CeeecchhhhcCCC
Confidence 99999999986443
No 63
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.03 E-value=2.6e-05 Score=59.40 Aligned_cols=66 Identities=8% Similarity=0.104 Sum_probs=54.6
Q ss_pred HHHHHHHHhCC-CC-CCcccHHHHHHHHHH---hccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDH-NK-TGFLNFEDFVKGLSI---LCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 90 ~~~~lF~~~D~-d~-dG~I~feEF~~~l~~---~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+-.+|..||. ++ +|.|+.+||..++.. +.....++.+..+|+.+|.|++|.|+.+||..++..+.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 34457888887 56 789999999999974 34456788999999999999999999999998888754
No 64
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.03 E-value=7.4e-06 Score=49.10 Aligned_cols=27 Identities=22% Similarity=0.468 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
++++|+.+|.|++|.|+++||+.++..
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 677999999999999999999998875
No 65
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.99 E-value=1e-05 Score=61.61 Aligned_cols=65 Identities=8% Similarity=0.150 Sum_probs=51.1
Q ss_pred HHHHHhhhhccC--CCCcccHHHHHHHHHH-HHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 126 KLRWIFCLYDIN--GDGVISKDDLYNIVSS-VYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 126 ~l~~~F~l~D~d--~dG~Is~eEl~~~l~~-~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
.+-.+|..|+.+ ++|+|+.+||+.++.. .+..+. .....+.++.+|+.+|.|+||.|+|++|+..
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t--------~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~ 76 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLK--------KEKNQKAIDKIFEDLDTNQDGQLSFEEFLVL 76 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhc--------cCCCHHHHHHHHHHcCCCCCCcCcHHHHHHH
Confidence 567889999866 4799999999999974 222221 0112788999999999999999999999863
No 66
>KOG0041|consensus
Probab=97.97 E-value=7.8e-06 Score=70.38 Aligned_cols=60 Identities=13% Similarity=0.167 Sum_probs=45.6
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.+..+|+.||.+.||||+..||+.+|..++ .. .+.--++.|+++.|-|.||+|||.+|+-
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLg----ap--------QTHL~lK~mikeVded~dgklSfreflL 159 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLG----AP--------QTHLGLKNMIKEVDEDFDGKLSFREFLL 159 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhC----Cc--------hhhHHHHHHHHHhhcccccchhHHHHHH
Confidence 566788888888888888888888888753 21 1355567888888888888888877754
No 67
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.96 E-value=4.8e-05 Score=58.03 Aligned_cols=66 Identities=15% Similarity=0.236 Sum_probs=51.3
Q ss_pred HHHHHHHH-hCCCCCC-cccHHHHHHHHHHhc-----cCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 90 YAHYVFNT-LDHNKTG-FLNFEDFVKGLSILC-----RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 90 ~~~~lF~~-~D~d~dG-~I~feEF~~~l~~~~-----~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+..+|.. +|.+++| .|+.+||..++.... .......+..+++.+|.|++|.|+.+||..++..+.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 34557777 6677765 899999998887653 234467889999999999999999999998887753
No 68
>KOG0041|consensus
Probab=97.91 E-value=5.3e-05 Score=65.34 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=77.3
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccC--C
Q psy6668 55 GSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--S 122 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~--~ 122 (306)
..|+..+|+.++..|+.+|.+.||+|+..|++.+ .-+..|+...|.|.+|+|+|.||+.++.....+ .
T Consensus 91 ~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaagEL~ 170 (244)
T KOG0041|consen 91 SEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELQ 170 (244)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccccc
Confidence 4789999999999999999999999999999988 566889999999999999999999888765443 2
Q ss_pred hHHHHHHHhhh--hccCCCCcccHHHHHHHHH
Q psy6668 123 EEEKLRWIFCL--YDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 123 ~ee~l~~~F~l--~D~d~dG~Is~eEl~~~l~ 152 (306)
.+..+..+=++ .|...-|......|-.+=.
T Consensus 171 ~ds~~~~LAr~~eVDVskeGV~GAknFFeAKI 202 (244)
T KOG0041|consen 171 EDSGLLRLARLSEVDVSKEGVSGAKNFFEAKI 202 (244)
T ss_pred cchHHHHHHHhcccchhhhhhhhHHHHHHHHH
Confidence 23344444455 7888888888777655533
No 69
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.91 E-value=9.9e-06 Score=49.17 Aligned_cols=27 Identities=37% Similarity=0.683 Sum_probs=23.2
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHH
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~ 152 (306)
+++.+|+.||.|++|+|+.+||..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 468899999999999999999999888
No 70
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.82 E-value=0.0001 Score=56.27 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=15.1
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
...+..+|+..|.|+||.|+..||..++..+
T Consensus 47 ~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 47 PMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3344445555555555555555554444443
No 71
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.69 E-value=0.00023 Score=54.09 Aligned_cols=65 Identities=22% Similarity=0.196 Sum_probs=50.6
Q ss_pred HHHHHHHhCCC--CCCcccHHHHHHHHHH-hccCC----hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHN--KTGFLNFEDFVKGLSI-LCRGS----EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 91 ~~~lF~~~D~d--~dG~I~feEF~~~l~~-~~~~~----~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
+-.+|..|+.+ .+|.|+.+||..++.. +.... .++.+..+|+.+|.|++|.|+.+||..++..+.
T Consensus 10 ~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 10 IINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 44577777755 3688999999988863 22222 278899999999999999999999999888754
No 72
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.62 E-value=6.6e-05 Score=43.35 Aligned_cols=24 Identities=33% Similarity=0.598 Sum_probs=17.6
Q ss_pred HHHHhhhhccCCCCcccHHHHHHH
Q psy6668 127 LRWIFCLYDINGDGVISKDDLYNI 150 (306)
Q Consensus 127 l~~~F~l~D~d~dG~Is~eEl~~~ 150 (306)
++.+|+.+|.|+||.|+.+||.++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHH
Confidence 356777778888888887777765
No 73
>KOG0040|consensus
Probab=97.60 E-value=0.00036 Score=74.76 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=51.2
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-----------------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc
Q psy6668 57 GNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-----------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC 119 (306)
Q Consensus 57 ~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-----------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~ 119 (306)
+|+++|+.+--.|+.+|.+.+|.++.++|..+ +..+.++...|++.+|+|+..+|+.+|..-.
T Consensus 2247 VtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~E 2326 (2399)
T KOG0040|consen 2247 VTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKE 2326 (2399)
T ss_pred CCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcc
Confidence 55566665555555555555666666666555 3555555566666666666666655554322
Q ss_pred c--CChHHHHHHHhhhhccCCCCcccHHHHHHH
Q psy6668 120 R--GSEEEKLRWIFCLYDINGDGVISKDDLYNI 150 (306)
Q Consensus 120 ~--~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~ 150 (306)
. -...+.|..+|+.+|. +.-||++++++.-
T Consensus 2327 TeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~ 2358 (2399)
T KOG0040|consen 2327 TENILSSEEIEDAFRALDA-GKPYVTKEELYQN 2358 (2399)
T ss_pred cccccchHHHHHHHHHhhc-CCccccHHHHHhc
Confidence 1 1223355666666655 5556666555443
No 74
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.60 E-value=0.00017 Score=69.49 Aligned_cols=54 Identities=22% Similarity=0.407 Sum_probs=48.6
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
..+..+|+.+|.|++|.|+++||+. ...+|..+|.|++|.|+.+||..++...+
T Consensus 334 ~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 334 HAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGAAL 387 (391)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 5778899999999999999999952 46789999999999999999999998754
No 75
>PF14658 EF-hand_9: EF-hand domain
Probab=97.57 E-value=0.00022 Score=50.99 Aligned_cols=61 Identities=25% Similarity=0.391 Sum_probs=56.8
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHhhhhccCCC-CcccHHHHHHHHHH
Q psy6668 93 YVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGD-GVISKDDLYNIVSS 153 (306)
Q Consensus 93 ~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~l~D~d~d-G~Is~eEl~~~l~~ 153 (306)
..|..||.++.|.|--.+++.+|..+.. .+.+.+++.+...+|.++. |.|+.+.|..+|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 3799999999999999999999998877 8889999999999999999 99999999999885
No 76
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.53 E-value=0.00022 Score=54.48 Aligned_cols=63 Identities=10% Similarity=0.162 Sum_probs=49.0
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHH-HhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYE-LMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~-~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.+-.+|..|- .+.|.+++.||+.+|..-.- .+.... -...++++|+.+|.|+||.|+|+||+.
T Consensus 9 ~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~--------d~~~vd~im~~LD~n~Dg~vdF~EF~~ 72 (91)
T cd05024 9 KMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQN--------DPMAVDKIMKDLDDCRDGKVGFQSFFS 72 (91)
T ss_pred HHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCC--------CHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 4567888887 44679999999999987432 122211 267899999999999999999999975
No 77
>KOG4065|consensus
Probab=97.45 E-value=0.00025 Score=55.92 Aligned_cols=76 Identities=9% Similarity=0.083 Sum_probs=58.2
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHh--ccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccC
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELM--GTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~--g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~ 198 (306)
.++.--..|.+.|.|+||+|+--|+.++++...... |...-+..++...+..++.+++.-|.|+||.|+|-+|+++
T Consensus 65 peqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 65 PEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred HHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 333344579999999999999999999999876532 2222223345567788899999999999999999999865
No 78
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.43 E-value=0.00035 Score=54.83 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=48.6
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYEL 157 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~ 157 (306)
...+|...+. ++|.|+-++-..++.. .+-..+.+..+|.+.|.|++|+++.+||.-+|+-+...
T Consensus 12 y~~~F~~l~~-~~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~~ 75 (104)
T PF12763_consen 12 YDQIFQSLDP-QDGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINRK 75 (104)
T ss_dssp HHHHHHCTSS-STTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CCCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHHH
Confidence 4447777664 5788888888777663 24566789999999999999999999999888877543
No 79
>KOG0030|consensus
Probab=97.35 E-value=0.0015 Score=53.30 Aligned_cols=96 Identities=9% Similarity=-0.027 Sum_probs=78.5
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccC--CCCcccHHHHHHHHHHHHHHhccccccccC
Q psy6668 90 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDIN--GDGVISKDDLYNIVSSVYELMGTYAYRAFD 167 (306)
Q Consensus 90 ~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d--~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~ 167 (306)
..+.+|..||..+||+|++.+.-..+..+...+.+..+..+...++.+ +--.|+.++|.-++..+...-.
T Consensus 12 e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~-------- 83 (152)
T KOG0030|consen 12 EFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD-------- 83 (152)
T ss_pred HHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc--------
Confidence 344599999999999999999999999998889999999999999887 5579999999999998654321
Q ss_pred hhhHHHHHHHHHHHhCCCCCCcEeeee
Q psy6668 168 SGMVAQRVEYLFQVSTKGFEMSILCSI 194 (306)
Q Consensus 168 ~~~~~~~v~~lf~~~D~d~DG~Is~~e 194 (306)
.-+-+..-+-++.+|++++|.|..-+
T Consensus 84 -q~t~edfvegLrvFDkeg~G~i~~ae 109 (152)
T KOG0030|consen 84 -QGTYEDFVEGLRVFDKEGNGTIMGAE 109 (152)
T ss_pred -cCcHHHHHHHHHhhcccCCcceeHHH
Confidence 22345555667899999999998843
No 80
>PF14658 EF-hand_9: EF-hand domain
Probab=97.34 E-value=0.00029 Score=50.36 Aligned_cols=58 Identities=14% Similarity=0.086 Sum_probs=49.2
Q ss_pred HHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCC-CcEeeeeccc
Q psy6668 129 WIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFE-MSILCSISIP 197 (306)
Q Consensus 129 ~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~D-G~Is~~efv~ 197 (306)
.+|.+||.++.|.|...++..+|++++.. .. .+..++.+.+++|+++. |.|+++.|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~---~p--------~e~~Lq~l~~elDP~g~~~~v~~d~F~~ 60 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR---SP--------EESELQDLINELDPEGRDGSVNFDTFLA 60 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC---CC--------cHHHHHHHHHHhCCCCCCceEeHHHHHH
Confidence 47999999999999999999999995421 11 37799999999999998 9999988864
No 81
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.32 E-value=0.0009 Score=45.27 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=40.1
Q ss_pred cccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 105 FLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 105 ~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+++|.|...++..+.-...++.+..+|+..|++++|.+..+||..+++.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 4789999999998877888889999999999999999999999998875
No 82
>KOG0038|consensus
Probab=97.22 E-value=0.0012 Score=54.33 Aligned_cols=81 Identities=22% Similarity=0.319 Sum_probs=61.3
Q ss_pred CCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccC-ChHHH----HHHHhhhhcc
Q psy6668 73 CLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-SEEEK----LRWIFCLYDI 136 (306)
Q Consensus 73 d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~-~~ee~----l~~~F~l~D~ 136 (306)
..+|.|.++.++|..+ .-+.-.|+.+|-|+|+.|.-+++...+..+.++ ..+++ ...+....|.
T Consensus 81 SeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~ 160 (189)
T KOG0038|consen 81 SEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADL 160 (189)
T ss_pred ccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcC
Confidence 4566666777766665 233445778999999999999999999988763 23333 4566777899
Q ss_pred CCCCcccHHHHHHHHHH
Q psy6668 137 NGDGVISKDDLYNIVSS 153 (306)
Q Consensus 137 d~dG~Is~eEl~~~l~~ 153 (306)
||+|.|+..||..++..
T Consensus 161 DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 161 DGDGKLSFAEFEHVILR 177 (189)
T ss_pred CCCCcccHHHHHHHHHh
Confidence 99999999999988765
No 83
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.13 E-value=0.00019 Score=57.24 Aligned_cols=62 Identities=19% Similarity=0.304 Sum_probs=43.8
Q ss_pred CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecc
Q psy6668 121 GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISI 196 (306)
Q Consensus 121 ~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv 196 (306)
......+.+.|..+|.|+||+|+..|+..+...+ . ..+..+..+|+..|.|+||.||+.|+.
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l---~-----------~~e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL---M-----------PPEHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT---S-----------TTGGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH---h-----------hhHHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 4556788999999999999999999998775532 1 125668889999999999999987763
No 84
>KOG1029|consensus
Probab=97.10 E-value=0.0018 Score=65.66 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=102.7
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc---C---
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR---G--- 121 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~---~--- 121 (306)
.++..|-..-.++|..+.+ +.|+|+-.+-+.+ ..+.+|+.+-|.|+||+++..||..+|..+.. +
T Consensus 9 avT~~Er~K~~~qF~~Lkp-~~gfitg~qArnfflqS~LP~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~l 87 (1118)
T KOG1029|consen 9 AVTDEERQKHDAQFGQLKP-GQGFITGDQARNFFLQSGLPTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQL 87 (1118)
T ss_pred ccchHHHHHHHHHHhccCC-CCCccchHhhhhhHHhcCCChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcC
Confidence 4678888888889988764 5689999888887 78899999999999999999999877753210 0
Q ss_pred --------------------------------------------------------------------------------
Q psy6668 122 -------------------------------------------------------------------------------- 121 (306)
Q Consensus 122 -------------------------------------------------------------------------------- 121 (306)
T Consensus 88 P~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~ 167 (1118)
T KOG1029|consen 88 PPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPH 167 (1118)
T ss_pred CCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCC
Confidence
Q ss_pred ------------------------ChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHH
Q psy6668 122 ------------------------SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEY 177 (306)
Q Consensus 122 ------------------------~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~ 177 (306)
...-+.+.+|..+|+...||++-..-+.+|.. .+. ....+..
T Consensus 168 ~ss~se~~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~q----S~L----------pq~~LA~ 233 (1118)
T KOG1029|consen 168 DSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQ----SGL----------PQNQLAH 233 (1118)
T ss_pred CcchhhcCccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHh----cCC----------chhhHhh
Confidence 00124577899999999999999988888775 222 4778889
Q ss_pred HHHHhCCCCCCcEeeeecccC
Q psy6668 178 LFQVSTKGFEMSILCSISIPR 198 (306)
Q Consensus 178 lf~~~D~d~DG~Is~~efv~~ 198 (306)
|+...|.|+||+++.++|+-.
T Consensus 234 IW~LsDvd~DGkL~~dEfila 254 (1118)
T KOG1029|consen 234 IWTLSDVDGDGKLSADEFILA 254 (1118)
T ss_pred heeeeccCCCCcccHHHHHHH
Confidence 999999999999999999864
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.10 E-value=0.00069 Score=39.01 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=21.2
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGL 115 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l 115 (306)
++.+|..+|.|++|.|+++||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 3568999999999999999998753
No 86
>KOG2562|consensus
Probab=97.08 E-value=0.0012 Score=63.64 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=86.8
Q ss_pred cccccccCCCCCCCHHHHHHHH------------HHHhccCCCCCCcccHHHHHhH------------------------
Q psy6668 45 IAYPFESTRRGSGNGKNITFIQ------------QQKDNNCLAGGRCDHKLDIKQI------------------------ 88 (306)
Q Consensus 45 l~~~fD~~~dg~~s~~El~~l~------------~~F~~~d~~~~G~I~~~eF~~~------------------------ 88 (306)
.+..++.+..|.++...+.... +.+..++..+.++|...+|...
T Consensus 144 ~f~k~~~d~~g~it~~~Fi~~~~~~~~l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~ 223 (493)
T KOG2562|consen 144 TFRKIDGDDTGHITRDKFINYWMRGLMLTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYA 223 (493)
T ss_pred hhhhhccCcCCceeHHHHHHHHHhhhhHHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHHHHH
Confidence 4555677888999888875522 1233445667778888777765
Q ss_pred -HHHHHHHHHhCCCCCCcccHHHHHHH-----HHHhccCCh---------HHHHHH---HhhhhccCCCCcccHHHHHHH
Q psy6668 89 -RYAHYVFNTLDHNKTGFLNFEDFVKG-----LSILCRGSE---------EEKLRW---IFCLYDINGDGVISKDDLYNI 150 (306)
Q Consensus 89 -~~~~~lF~~~D~d~dG~I~feEF~~~-----l~~~~~~~~---------ee~l~~---~F~l~D~d~dG~Is~eEl~~~ 150 (306)
-.++++|-.++...+|.|+..|.... |..+..... -+.... -|-.+|+|++|.|++++|...
T Consensus 224 ~tvi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry 303 (493)
T KOG2562|consen 224 ETVIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRY 303 (493)
T ss_pred HHHhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHH
Confidence 46688899999999999999997542 222221110 111222 377789999999999999876
Q ss_pred HHHHHHHhccccccccChhhHHHHHHHHHH----HhCCCCCCcEeeeecc
Q psy6668 151 VSSVYELMGTYAYRAFDSGMVAQRVEYLFQ----VSTKGFEMSILCSISI 196 (306)
Q Consensus 151 l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~----~~D~d~DG~Is~~efv 196 (306)
-...+ +...++.+|. ..-.-.+|+++|++|+
T Consensus 304 ~d~tl---------------t~~ivdRIFs~v~r~~~~~~eGrmdykdFv 338 (493)
T KOG2562|consen 304 GDHTL---------------TERIVDRIFSQVPRGFTVKVEGRMDYKDFV 338 (493)
T ss_pred hccch---------------hhHHHHHHHhhccccceeeecCcccHHHHH
Confidence 54421 2455555665 2223345666664443
No 87
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.97 E-value=0.0044 Score=48.64 Aligned_cols=62 Identities=13% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
+++.+|.....+.|...++ ++|.|+-++...+ ..+.+|+...|.+++|.++++||+.+|..+
T Consensus 3 ~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 4678888899999988874 5799999999888 889999999999999999999999998754
No 88
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.90 E-value=0.0021 Score=62.01 Aligned_cols=51 Identities=24% Similarity=0.222 Sum_probs=44.4
Q ss_pred HHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 65 IQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 65 l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
+...|..+|.+++|.|+.+||.. ++.+|..+|.|++|.|+++||..++...
T Consensus 336 l~~aF~~~D~dgdG~Is~~E~~~---~~~~F~~~D~d~DG~Is~eEf~~~~~~~ 386 (391)
T PRK12309 336 AQEIFRLYDLDGDGFITREEWLG---SDAVFDALDLNHDGKITPEEMRAGLGAA 386 (391)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHH---HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 34567778999999999999964 6789999999999999999999988753
No 89
>KOG4347|consensus
Probab=96.89 E-value=0.0019 Score=64.55 Aligned_cols=96 Identities=24% Similarity=0.385 Sum_probs=78.1
Q ss_pred cCCCCCCCHHHHHHHHHHHhccCCCC-----------C---CcccHHHHHhH-----------HHHHHHHHHhCCCCCCc
Q psy6668 51 STRRGSGNGKNITFIQQQKDNNCLAG-----------G---RCDHKLDIKQI-----------RYAHYVFNTLDHNKTGF 105 (306)
Q Consensus 51 ~~~dg~~s~~El~~l~~~F~~~d~~~-----------~---G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~ 105 (306)
.-+++.++.+||..+|..|+.....+ . .+|+...|... ..+.++|...|.+.+|.
T Consensus 492 ~~~~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~ 571 (671)
T KOG4347|consen 492 VVQTTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGL 571 (671)
T ss_pred hcccCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcce
Confidence 34578899999999999997632111 1 12334444433 67889999999999999
Q ss_pred ccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHH
Q psy6668 106 LNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDL 147 (306)
Q Consensus 106 I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl 147 (306)
|+|.+|+.++..++.+..-+++..+|++||.+++ ..+.+|.
T Consensus 572 Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 572 LTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred eEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 9999999999999999999999999999999999 9999887
No 90
>KOG0751|consensus
Probab=96.87 E-value=0.0046 Score=60.14 Aligned_cols=101 Identities=18% Similarity=0.145 Sum_probs=66.3
Q ss_pred ccccCCCCCCCHHHHHHH-----------HHHHhccCCCCCCcccHHHHHhH----------------HHHHHHHHHhCC
Q psy6668 48 PFESTRRGSGNGKNITFI-----------QQQKDNNCLAGGRCDHKLDIKQI----------------RYAHYVFNTLDH 100 (306)
Q Consensus 48 ~fD~~~dg~~s~~El~~l-----------~~~F~~~d~~~~G~I~~~eF~~~----------------~~~~~lF~~~D~ 100 (306)
.-|..+||-++.+|+..+ ...|..+|..++|.++.+++.++ +.+...|. .
T Consensus 82 iaD~tKDglisf~eF~afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg---~ 158 (694)
T KOG0751|consen 82 IADQTKDGLISFQEFRAFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFG---D 158 (694)
T ss_pred hhhhcccccccHHHHHHHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhh---h
Confidence 346666677777766542 23555566666666766666665 33333332 2
Q ss_pred CCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 101 NKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 101 d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
+....++|.||..++..+. .|..+++|+..|..++|+|+.=++..++..+.
T Consensus 159 ~~~r~~ny~~f~Q~lh~~~----~E~~~qafr~~d~~~ng~is~Ldfq~imvt~~ 209 (694)
T KOG0751|consen 159 IRKRHLNYAEFTQFLHEFQ----LEHAEQAFREKDKAKNGFISVLDFQDIMVTIR 209 (694)
T ss_pred HHHHhccHHHHHHHHHHHH----HHHHHHHHHHhcccCCCeeeeechHhhhhhhh
Confidence 2334566777766666543 34578899999999999999999998888764
No 91
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.87 E-value=0.0015 Score=39.39 Aligned_cols=26 Identities=27% Similarity=0.554 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLS 116 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~ 116 (306)
++.+|+.+|.|++|.|+++||..++.
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 46799999999999999999999887
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.83 E-value=0.0013 Score=52.52 Aligned_cols=59 Identities=36% Similarity=0.419 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYN 149 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~ 149 (306)
..+...|..+|.|+||.|+-.|+..+...+ ...+.-++..|+..|.|+||.|+..|+..
T Consensus 54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 688899999999999999999987665533 34455688899999999999999999853
No 93
>KOG0040|consensus
Probab=96.55 E-value=0.0079 Score=65.02 Aligned_cols=91 Identities=23% Similarity=0.258 Sum_probs=70.0
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhcc-------CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccc
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCR-------GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAY 163 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-------~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~ 163 (306)
..-+|+.||.+.+|.+++.+|..++..+.. +.++..++.+..+.|.+.+|||+..|...+|..- -..+
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~---ETeN-- 2329 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK---ETEN-- 2329 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc---cccc--
Confidence 344999999999999999999999987654 2345589999999999999999999998887752 1111
Q ss_pred cccChhhHHHHHHHHHHHhCCCCCCcEee
Q psy6668 164 RAFDSGMVAQRVEYLFQVSTKGFEMSILC 192 (306)
Q Consensus 164 ~~~~~~~~~~~v~~lf~~~D~d~DG~Is~ 192 (306)
-...+.++..|+.+|. +--+|+-
T Consensus 2330 -----I~s~~eIE~AfraL~a-~~~yvtk 2352 (2399)
T KOG0040|consen 2330 -----ILSSEEIEDAFRALDA-GKPYVTK 2352 (2399)
T ss_pred -----ccchHHHHHHHHHhhc-CCccccH
Confidence 1124589999999988 4444444
No 94
>KOG0046|consensus
Probab=96.34 E-value=0.011 Score=58.03 Aligned_cols=67 Identities=9% Similarity=0.087 Sum_probs=58.5
Q ss_pred cCCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-------------HHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 51 STRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 51 ~~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
....+.+|..|+..+.++|...+ +++|+++..++..+ +.++.+....+.|.+|.|+|+||+.++..
T Consensus 7 ~~~~~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 7 PWLQSQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred hhhcccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 34456899999999999999999 89999999998887 78888999999999999999999986654
Q ss_pred h
Q psy6668 118 L 118 (306)
Q Consensus 118 ~ 118 (306)
+
T Consensus 86 l 86 (627)
T KOG0046|consen 86 L 86 (627)
T ss_pred h
Confidence 4
No 95
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.14 E-value=0.0062 Score=34.36 Aligned_cols=27 Identities=30% Similarity=0.630 Sum_probs=17.9
Q ss_pred HHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 127 LRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 127 l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
++.+|+.+|.+++|.|+..||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 455677777777777777777666553
No 96
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.74 E-value=0.029 Score=38.01 Aligned_cols=49 Identities=20% Similarity=0.235 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 57 GNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 57 ~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
++.+|++.+++.... +.+. ..+..+|+..|++++|.++.+||..++..+
T Consensus 2 msf~Evk~lLk~~NI-~~~~------------~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI-EMDD------------EYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHHTT-----H------------HHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc-CcCH------------HHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 456777777776643 2222 478889999999999999999999988754
No 97
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.60 E-value=0.019 Score=32.18 Aligned_cols=27 Identities=26% Similarity=0.464 Sum_probs=23.4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
++.+|..+|.+++|.|++.||..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456999999999999999999988763
No 98
>KOG0046|consensus
Probab=95.02 E-value=0.023 Score=55.73 Aligned_cols=62 Identities=11% Similarity=0.115 Sum_probs=50.6
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.++..|...| |++|+|+..|+..++.......|. ...+++++++...+.|.+|+|+|++|+.
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~---------~~~eei~~~l~~~~~~~~g~v~fe~f~~ 81 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGY---------FVREEIKEILGEVGVDADGRVEFEEFVG 81 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccc---------hhHHHHHHHHhccCCCcCCccCHHHHHH
Confidence 4667888889 999999999999888876543332 2478899999999999999999999987
No 99
>KOG4065|consensus
Probab=94.85 E-value=0.065 Score=42.51 Aligned_cols=58 Identities=26% Similarity=0.369 Sum_probs=43.8
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhccC----------ChHHH----HHHHhhhhccCCCCcccHHHHHHH
Q psy6668 93 YVFNTLDHNKTGFLNFEDFVKGLSILCRG----------SEEEK----LRWIFCLYDINGDGVISKDDLYNI 150 (306)
Q Consensus 93 ~lF~~~D~d~dG~I~feEF~~~l~~~~~~----------~~ee~----l~~~F~l~D~d~dG~Is~eEl~~~ 150 (306)
..|+..|-|+++.|+--|++.++...... +.+.+ +..+.+--|.|+||+|++-||.+.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 36888899999999999999988876431 23333 444556668999999999998764
No 100
>KOG3866|consensus
Probab=94.57 E-value=0.22 Score=46.08 Aligned_cols=115 Identities=13% Similarity=0.153 Sum_probs=75.8
Q ss_pred CCCCCCCCCccccccccccCCCCCCCHHHHHHHHHHH--hccCCCCCCcccHHHHHhH--HHHHHHHHHhCCCCCCcccH
Q psy6668 33 NTLPDIPFDCKFIAYPFESTRRGSGNGKNITFIQQQK--DNNCLAGGRCDHKLDIKQI--RYAHYVFNTLDHNKTGFLNF 108 (306)
Q Consensus 33 ~~~~~i~~~~~~l~~~fD~~~dg~~s~~El~~l~~~F--~~~d~~~~G~I~~~eF~~~--~~~~~lF~~~D~d~dG~I~f 108 (306)
+.+..-.|+++..|.+.|+|.+|.++..|++.++..= +.+++.+ -.-+..+...- ..-..+++..|+|.|..|+.
T Consensus 237 DgLdpn~fdPKTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkN-eeDDM~EmeEErlRMREHVMk~vDtNqDRlvtl 315 (442)
T KOG3866|consen 237 DGLDPNQFDPKTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKN-EEDDMKEMEEERLRMREHVMKQVDTNQDRLVTL 315 (442)
T ss_pred cCCCcccCCcchheeeeccCCcccccHHHHHHHHHHHHHHhcCCCC-cchHHHHHHHHHHHHHHHHHHhcccchhhhhhH
Confidence 3345557788888889999999999999999987532 1233321 11111111111 45667899999999999999
Q ss_pred HHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 109 EDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 109 eEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
+||+..-....-....+.|.. .+..-..+.+||.++=+.+
T Consensus 316 eEFL~~t~~kef~~p~e~WEt------l~q~~~yTeEEL~~fE~e~ 355 (442)
T KOG3866|consen 316 EEFLNDTDNKEFNPPKEEWET------LGQKKVYTEEELQQFEREY 355 (442)
T ss_pred HHHHhhhhhcccCCcchhhhh------hcccccccHHHHHHHHHHH
Confidence 999987665443444455542 3445577888888776654
No 101
>KOG4666|consensus
Probab=94.16 E-value=0.078 Score=49.31 Aligned_cols=89 Identities=10% Similarity=0.039 Sum_probs=68.3
Q ss_pred HHHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhh
Q psy6668 64 FIQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFC 132 (306)
Q Consensus 64 ~l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~ 132 (306)
.+...|..+|.+++|.++.-+.... ..++--|+.|+.+.||.++-.+|..++... .+-.+-++--.|+
T Consensus 260 ~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~-lgv~~l~v~~lf~ 338 (412)
T KOG4666|consen 260 KLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVV-LGVEVLRVPVLFP 338 (412)
T ss_pred hhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHh-cCcceeeccccch
Confidence 3455666667777777776665544 677889999999999999998887777653 2333445667899
Q ss_pred hhccCCCCcccHHHHHHHHHH
Q psy6668 133 LYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 133 l~D~d~dG~Is~eEl~~~l~~ 153 (306)
..+...+|.|+.++|++++..
T Consensus 339 ~i~q~d~~ki~~~~f~~fa~~ 359 (412)
T KOG4666|consen 339 SIEQKDDPKIYASNFRKFAAT 359 (412)
T ss_pred hhhcccCcceeHHHHHHHHHh
Confidence 999999999999999998876
No 102
>KOG1955|consensus
Probab=93.98 E-value=0.12 Score=50.56 Aligned_cols=64 Identities=9% Similarity=0.059 Sum_probs=54.7
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 55 GSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
-.|+.++-++...+|+...+|-+|+|+-.--+++ .++..||.+.|.++||.+++.|||.++..+
T Consensus 223 w~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 223 WQITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred cccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 4688999999999999998888888876655555 788889999999999999999999998754
No 103
>KOG3555|consensus
Probab=93.97 E-value=0.087 Score=49.32 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=42.8
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeec
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSIS 195 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~ef 195 (306)
...+-++|..+|.|.||.++..||+.+-..- .+.-++.+|...|...||.||-.|+
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~ldk----------------nE~CikpFfnsCD~~kDg~iS~~EW 304 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIELDK----------------NEACIKPFFNSCDTYKDGSISTNEW 304 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhccC----------------chhHHHHHHhhhcccccCccccchh
Confidence 4567888888888888888888887664431 2677888888888888888887544
No 104
>KOG0169|consensus
Probab=93.91 E-value=0.52 Score=48.49 Aligned_cols=122 Identities=16% Similarity=0.134 Sum_probs=84.5
Q ss_pred HHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHh
Q psy6668 62 ITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIF 131 (306)
Q Consensus 62 l~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F 131 (306)
...+...|...|.+++|.++..+...+ ..+.++|...+..+++++.+++|..........+ ++..+|
T Consensus 135 ~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~~f 211 (746)
T KOG0169|consen 135 EHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYFLF 211 (746)
T ss_pred HHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHHHH
Confidence 334556777778888888888877776 5677888888888889999999988877655433 678888
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCC----CCCcEeeeeccc
Q psy6668 132 CLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKG----FEMSILCSISIP 197 (306)
Q Consensus 132 ~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d----~DG~Is~~efv~ 197 (306)
..|-.+ .++++.++|..++......- ....+.++++++.+... ..+.++++.|.+
T Consensus 212 ~~~s~~-~~~ls~~~L~~Fl~~~q~e~----------~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~ 270 (746)
T KOG0169|consen 212 VQYSHG-KEYLSTDDLLRFLEEEQGED----------GATLDEAEEIIERYEPSKEFRRHGLLSLDGFTR 270 (746)
T ss_pred HHHhCC-CCccCHHHHHHHHHHhcccc----------cccHHHHHHHHHHhhhhhhccccceecHHHHHH
Confidence 887544 89999999999998752111 22356666666665443 334466655533
No 105
>KOG3555|consensus
Probab=93.50 E-value=0.14 Score=48.07 Aligned_cols=94 Identities=15% Similarity=0.152 Sum_probs=68.1
Q ss_pred CCCHHHHHH----HHHHHhccCCCCCCcccHHHHHhH-------------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 56 SGNGKNITF----IQQQKDNNCLAGGRCDHKLDIKQI-------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 56 ~~s~~El~~----l~~~F~~~d~~~~G~I~~~eF~~~-------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
.-+..||.. |..-|+.+..+.++......+... ..+..||+.+|.|.|+.++..|+..+
T Consensus 200 ~Ct~qeL~~lg~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I---- 275 (434)
T KOG3555|consen 200 ACTDQELRRLGNRLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAI---- 275 (434)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhh----
Confidence 367788765 444555554444333332222222 67888999999999999999997554
Q ss_pred ccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 119 CRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 119 ~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.....+.-++-.|...|...||.|+-.|+..-+..
T Consensus 276 ~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 276 ELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hccCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 34566778999999999999999999999877664
No 106
>KOG4578|consensus
Probab=93.27 E-value=0.026 Score=52.43 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=50.3
Q ss_pred HHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 125 EKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 125 e~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..+++-|..+|+|+++.|++.|++.+=.-+..... ...-...+|+-.|.|+|.+||+.|+..
T Consensus 333 Rvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~-----------~rkC~rk~~~yCDlNkDKkISl~Ew~~ 394 (421)
T KOG4578|consen 333 RVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSK-----------PRKCSRKFFKYCDLNKDKKISLDEWRG 394 (421)
T ss_pred heeeeeeeeecccccCccchhhcchHHHHHHhhcc-----------HHHHhhhcchhcccCCCceecHHHHhh
Confidence 35788999999999999999998766554433222 478889999999999999999987754
No 107
>KOG3866|consensus
Probab=93.06 E-value=0.079 Score=48.92 Aligned_cols=70 Identities=13% Similarity=0.102 Sum_probs=50.2
Q ss_pred HHHhhhhccCCCCcccHHHHHHHHHHHHHHhcccccccc----ChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 128 RWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAF----DSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 128 ~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~----~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
+..|.+.|.|+||+++..||..++..-.+++-.....+- .++.....-+.+++.+|+|.|..|++++|+.
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~ 320 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLN 320 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHh
Confidence 456899999999999999999998876665532211111 0111122335678999999999999999987
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=92.95 E-value=0.32 Score=36.02 Aligned_cols=62 Identities=11% Similarity=0.204 Sum_probs=49.8
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccC--ChHHHHHHHhhhhccC----CCCcccHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--SEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSS 153 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~--~~ee~l~~~F~l~D~d----~dG~Is~eEl~~~l~~ 153 (306)
+..+|..+.. +.+.|+.++|..+|....+. ...+.++.+++.|..+ ..+.++.++|..+|.+
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 5678999965 67899999999999876553 3577888899998655 4799999999999875
No 109
>KOG0998|consensus
Probab=87.81 E-value=0.82 Score=48.63 Aligned_cols=131 Identities=16% Similarity=0.144 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc--C----
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR--G---- 121 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~--~---- 121 (306)
.++..|....-..|..+++. +|.++-...+.+ ..+.+++...|.+.+|.+++.||..+|..... .
T Consensus 122 ~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~Lp~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~ 200 (847)
T KOG0998|consen 122 AITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSKLPSDVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSE 200 (847)
T ss_pred CCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcCCCChhhhccccccccccccCCCChhhhhhhhhHHHHHhhcccC
Confidence 47778877777778887765 566666555555 67778999999999999999999877753211 0
Q ss_pred -------------------------------------------------------------------------------C
Q psy6668 122 -------------------------------------------------------------------------------S 122 (306)
Q Consensus 122 -------------------------------------------------------------------------------~ 122 (306)
.
T Consensus 201 p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~ 280 (847)
T KOG0998|consen 201 PVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASPTTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPS 280 (847)
T ss_pred CCCccCCcccCCcchhcccccCcccccccccccccccccccccccccchhcccCCccccccccccccccccccCcccChH
Confidence 0
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccCCCc
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPRSPY 201 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~~p~ 201 (306)
....+..+|...|.+.+|+|+..+....+.. .|. ....+..++...|.++.|.|++.+|.-..+.
T Consensus 281 d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~----~gl----------~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 281 DKQKYSKIFSQVDKDNDGSISSNEARNIFLP----FGL----------SKPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred HHHHHHHHHHhccccCCCccccccccccccc----CCC----------ChhhhhhhhhhcchhccCcccccccchhhhh
Confidence 1123556899999999999999998888776 232 3788899999999999999999877664433
No 110
>KOG4578|consensus
Probab=87.58 E-value=0.46 Score=44.37 Aligned_cols=64 Identities=23% Similarity=0.305 Sum_probs=51.9
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 90 ~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.+...|..+|.|.++.|+-.||..+-..+.. .....-.+.+|+..|.|+|-.|+.+|++.-|..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 4667899999999999999997766554443 445556788999999999999999999887664
No 111
>KOG0169|consensus
Probab=87.28 E-value=1.3 Score=45.80 Aligned_cols=66 Identities=23% Similarity=0.409 Sum_probs=59.0
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
.++..+|...|++++|.++|.+-..++..+...-.+.+++..|+..|..++|.+...++..+....
T Consensus 136 ~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~ 201 (746)
T KOG0169|consen 136 HWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKEL 201 (746)
T ss_pred HHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhh
Confidence 688999999999999999999999988877766777889999999999999999999998887764
No 112
>KOG1707|consensus
Probab=87.04 E-value=4.2 Score=41.05 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=65.1
Q ss_pred CCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH--------------HHHHHHHHHhCCCC--CCcccHHHHHHHHHHh
Q psy6668 55 GSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI--------------RYAHYVFNTLDHNK--TGFLNFEDFVKGLSIL 118 (306)
Q Consensus 55 g~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~--------------~~~~~lF~~~D~d~--dG~I~feEF~~~l~~~ 118 (306)
..+...-++.|.+.|+..|.+.+|.++-.|+..+ ..+..+....-.++ +..++..-|+.+-..+
T Consensus 187 qelkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lf 266 (625)
T KOG1707|consen 187 QELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLF 266 (625)
T ss_pred ccccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Confidence 4566777778888998888888888888888776 23333333322222 3345555554432221
Q ss_pred cc-C-----------------------------------------ChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 119 CR-G-----------------------------------------SEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 119 ~~-~-----------------------------------------~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
.. + .--+.+..+|..||.|+||-++..||..+....
T Consensus 267 iergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~ 344 (625)
T KOG1707|consen 267 IERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTA 344 (625)
T ss_pred HHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhC
Confidence 10 0 012457789999999999999999999888764
No 113
>KOG0035|consensus
Probab=86.59 E-value=2.6 Score=44.61 Aligned_cols=92 Identities=9% Similarity=0.022 Sum_probs=65.7
Q ss_pred CCHHHHHHHHHHHhccCCCCCCcccHHHHHhH---------------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-c
Q psy6668 57 GNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI---------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-R 120 (306)
Q Consensus 57 ~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~---------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~-~ 120 (306)
.+...+..+...|...+....|.++.++|..+ ..|.++.+..|.+.-|.++|.+|...|..-. .
T Consensus 741 ~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~ 820 (890)
T KOG0035|consen 741 TSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED 820 (890)
T ss_pred hhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh
Confidence 44444555555555555556678888888887 4566666777777778899999988887543 2
Q ss_pred CChHHHHHHHhhhhccCCCCcccHHHHHH
Q psy6668 121 GSEEEKLRWIFCLYDINGDGVISKDDLYN 149 (306)
Q Consensus 121 ~~~ee~l~~~F~l~D~d~dG~Is~eEl~~ 149 (306)
.+.+.++..+|+.+-++.. +|..+||..
T Consensus 821 l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 821 LDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred hcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 5667788888888876666 788888766
No 114
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=85.99 E-value=3.2 Score=34.80 Aligned_cols=58 Identities=14% Similarity=0.154 Sum_probs=36.0
Q ss_pred CCCcccHHHHHHHHHHhc---cCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhc
Q psy6668 102 KTGFLNFEDFVKGLSILC---RGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMG 159 (306)
Q Consensus 102 ~dG~I~feEF~~~l~~~~---~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g 159 (306)
....|+-..|..++.... .......+..+|..+-..+...|+.++|..+|..+....+
T Consensus 15 ~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~~~~ 75 (154)
T PF05517_consen 15 NGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAEKKG 75 (154)
T ss_dssp TSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHHHHS
T ss_pred ccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHhh
Confidence 334566666666665431 2345566777888776666667888888888887765544
No 115
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=85.10 E-value=3.4 Score=35.32 Aligned_cols=30 Identities=20% Similarity=0.460 Sum_probs=27.8
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.++.+.+|..|+..+.+.++..|+..+++.
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 568999999999999999999999999987
No 116
>KOG0039|consensus
Probab=85.05 E-value=2.3 Score=43.97 Aligned_cols=80 Identities=16% Similarity=0.290 Sum_probs=63.8
Q ss_pred CCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHh
Q psy6668 103 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 182 (306)
Q Consensus 103 dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~ 182 (306)
++ |+++||. ....+.+++++..|..+|. .+|.++.+|+..++........ .........+....++.+.
T Consensus 2 ~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 70 (646)
T KOG0039|consen 2 EG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW----LSLIKKQTEEYAALIMEEL 70 (646)
T ss_pred CC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh----hhhhhhhhhHHHHHhhhhc
Confidence 56 9999998 4667889999999999998 9999999999999887654332 1223445678888899999
Q ss_pred CCCCCCcEeee
Q psy6668 183 TKGFEMSILCS 193 (306)
Q Consensus 183 D~d~DG~Is~~ 193 (306)
|.+..|.+.++
T Consensus 71 ~~~~~~y~~~~ 81 (646)
T KOG0039|consen 71 DPDHKGYITNE 81 (646)
T ss_pred cccccceeeec
Confidence 99999977763
No 117
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=84.68 E-value=5 Score=34.28 Aligned_cols=69 Identities=13% Similarity=0.154 Sum_probs=49.4
Q ss_pred CCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhccC-------ChHHHHHHHhhhhccCCCCcccHHHHHH
Q psy6668 77 GRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG-------SEEEKLRWIFCLYDINGDGVISKDDLYN 149 (306)
Q Consensus 77 ~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~-------~~ee~l~~~F~l~D~d~dG~Is~eEl~~ 149 (306)
+|....+.|.+ ||..++..+.+.+++.|...++..-... ...-++..+|.+. .+.+|++.+++++.
T Consensus 90 eGrFvp~kFe~------iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~ 162 (174)
T PF05042_consen 90 EGRFVPQKFEE------IFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRG 162 (174)
T ss_pred CCcCCHHHHHH------HHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhh
Confidence 45555655555 9999998878899999998888753321 1234566667765 67799999999987
Q ss_pred HHH
Q psy6668 150 IVS 152 (306)
Q Consensus 150 ~l~ 152 (306)
+.-
T Consensus 163 vYD 165 (174)
T PF05042_consen 163 VYD 165 (174)
T ss_pred hcc
Confidence 765
No 118
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=84.02 E-value=0.95 Score=33.41 Aligned_cols=61 Identities=8% Similarity=0.107 Sum_probs=44.5
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCC----CCCcEeeeeccc
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKG----FEMSILCSISIP 197 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d----~DG~Is~~efv~ 197 (306)
+++.+|+.|-. +.++|+.++|..+|+... +. .....+.+..++..+..+ ..+.+++..|..
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ---~~-------~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~ 65 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQ---GE-------PRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTR 65 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTS---S--------TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHh---cc-------ccCcHHHHHHHHHHHccchhhcccCCcCHHHHHH
Confidence 46789999955 899999999999998631 11 012377788888887654 468899887764
No 119
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=82.49 E-value=0.53 Score=34.06 Aligned_cols=29 Identities=17% Similarity=0.314 Sum_probs=24.6
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHH
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~ 152 (306)
..+.+..+|+.+ .++.+||+.+||++.|.
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSLT 32 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHcC
Confidence 456889999999 78889999999998765
No 120
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=81.16 E-value=4.8 Score=30.66 Aligned_cols=70 Identities=19% Similarity=0.257 Sum_probs=43.9
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
.++++.+|+.+ .|.+|.++..-|..+|+.+..... .+.+...-..++..++..|... ...-.|+.++|+.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~-~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~ 71 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPR-AVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLD 71 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHH-HTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHH-HhCccccccCcHHHHHHHhccc--CCCCccCHHHHHH
Confidence 57899999999 789999999999999998754321 1111122223678888999986 3566787777754
No 121
>KOG1029|consensus
Probab=79.03 E-value=3.2 Score=43.04 Aligned_cols=63 Identities=27% Similarity=0.459 Sum_probs=50.2
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
.-..++|+..|+...|+++-..=..+|. ..+.....+-.++.+-|.|+||.++.+||.-+|..
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~--qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALG--QSGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHH--hcCCchhhHhhheeeeccCCCCcccHHHHHHHHHH
Confidence 3456799999999999998776655554 23456677889999999999999999999776654
No 122
>KOG4347|consensus
Probab=78.69 E-value=5.3 Score=40.67 Aligned_cols=60 Identities=17% Similarity=0.184 Sum_probs=47.2
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeec
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSIS 195 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~ef 195 (306)
...-+.++|+++|.+++|.|+..+|..-|..+. .| ...+.+.-+|+.+|.++| ..+.++.
T Consensus 553 s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~--~~----------~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 553 SLIFLERLFRLLDDSMTGLLTFKDLVSGLSILK--AG----------DALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHhcccCCcceeEHHHHHHHHHHHH--hh----------hHHHHHHHHHhhccCCcc-ccccccc
Confidence 344578999999999999999999988777642 12 246778889999999998 7776555
No 123
>PLN02952 phosphoinositide phospholipase C
Probab=76.61 E-value=7 Score=39.95 Aligned_cols=52 Identities=17% Similarity=0.334 Sum_probs=39.2
Q ss_pred CCCcccHHHHHHHHHHhcc--CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 102 KTGFLNFEDFVKGLSILCR--GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 102 ~dG~I~feEF~~~l~~~~~--~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
+.|.++|+||..+...+.. .....++..+|..|-. +.+.++.++|..+|...
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~ 66 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLH 66 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHh
Confidence 4578999999887776642 2356788899988854 44689999999998874
No 124
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=75.70 E-value=13 Score=28.31 Aligned_cols=85 Identities=9% Similarity=-0.003 Sum_probs=53.5
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhc-cCChHHHHHHHh
Q psy6668 53 RRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILC-RGSEEEKLRWIF 131 (306)
Q Consensus 53 ~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~-~~~~ee~l~~~F 131 (306)
-||.++..|...+.+.+...- .++.+ ...+++..+........++.+|...+...+ ......-+..+|
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~-----~l~~~------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~ 80 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERF-----GLDAE------EAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALW 80 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHh-----CcCHH------HHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 479999999998887766521 12222 334455555554455678999988877544 223344466667
Q ss_pred hhhccCCCCcccHHHHHHH
Q psy6668 132 CLYDINGDGVISKDDLYNI 150 (306)
Q Consensus 132 ~l~D~d~dG~Is~eEl~~~ 150 (306)
++.- -||.++..|-.-+
T Consensus 81 ~vA~--ADG~~~~~E~~~l 97 (104)
T cd07313 81 EVAY--ADGELDEYEEHLI 97 (104)
T ss_pred HHHH--hcCCCCHHHHHHH
Confidence 7654 4688888886544
No 125
>KOG1955|consensus
Probab=74.82 E-value=6.3 Score=39.03 Aligned_cols=63 Identities=21% Similarity=0.286 Sum_probs=48.4
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 90 ~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
++-.-|+.+..|-.|.|.-.--..++.+ ....-+++..+|++.|.|+||-++..||+.++..+
T Consensus 232 YYvnQFrtvQpDp~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 232 YYVNQFRTVQPDPHGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred HHHhhhhcccCCcccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 4555777888888888876554444442 13456789999999999999999999999998865
No 126
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=74.31 E-value=7.5 Score=32.03 Aligned_cols=48 Identities=10% Similarity=0.167 Sum_probs=29.2
Q ss_pred HHHHHHHhCCC-------CCCcccHHHHHHHHHHhcc-CChHHHHHHHhhhhccCC
Q psy6668 91 AHYVFNTLDHN-------KTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDING 138 (306)
Q Consensus 91 ~~~lF~~~D~d-------~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~l~D~d~ 138 (306)
+..+...|..+ ..+.|+|+.|..+|..+.. ..+++-.+.+|..|-...
T Consensus 27 lkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 27 LKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKKP 82 (138)
T ss_dssp HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS----
T ss_pred HHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCcc
Confidence 44455555332 3468999999999998765 456677788888885443
No 127
>PF03985 Paf1: Paf1 ; InterPro: IPR007133 Members of this family are components of the RNA polymerase II associated Paf1 complex. The Paf1 complex functions during the elongation phase of transcription in conjunction with Spt4-Spt5 and Spt16-Pob3i [, ].
Probab=72.56 E-value=3.6 Score=40.47 Aligned_cols=44 Identities=32% Similarity=0.675 Sum_probs=32.0
Q ss_pred CcceeeeeccCCCCCCCCCcccccccc-ccCCCCCCCHHHHHHHHHHH
Q psy6668 23 SELVCRVKYNNTLPDIPFDCKFIAYPF-ESTRRGSGNGKNITFIQQQK 69 (306)
Q Consensus 23 ~ell~rv~~~~~~~~i~~~~~~l~~~f-D~~~dg~~s~~El~~l~~~F 69 (306)
.+|||+|+|.|.+|..|+.++++.+.+ +.+. ++..-+..|++.+
T Consensus 1 qd~i~~iry~N~LP~pp~~pK~L~~p~~~~~~---~~~~~~tsL~~~~ 45 (436)
T PF03985_consen 1 QDFICRIRYRNNLPPPPFPPKFLDIPFTDEQR---FSPYFATSLEREY 45 (436)
T ss_pred CceeeeeeecCCCcccCCCCeeecCCCCchhc---cccchhhhHHHhc
Confidence 479999999999999999999998887 3332 3333344455444
No 128
>KOG0042|consensus
Probab=70.68 E-value=11 Score=38.14 Aligned_cols=72 Identities=21% Similarity=0.247 Sum_probs=61.1
Q ss_pred ccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 80 DHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 80 I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
++.++|.. ....|..+|.|+.|.+...+.+..|.....+..++.+.+..+..|.+-+|++...|+.+++..+
T Consensus 587 ~~~~~~~~---~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 587 LTPEDFLR---RKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred cCHHHHHH---HHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 45555553 5667899999999999999999999987767888899999999999999999999999888875
No 129
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=69.77 E-value=46 Score=25.17 Aligned_cols=83 Identities=20% Similarity=0.243 Sum_probs=49.9
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCCh---HHHHHH
Q psy6668 53 RRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE---EEKLRW 129 (306)
Q Consensus 53 ~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~---ee~l~~ 129 (306)
-||.++..|.+.+.+.+..+... ..+- ..+..+|... .....++.+|...+....+.+. ..-+..
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~~------~~~~---~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~r~~~l~~ 79 (106)
T cd07316 12 ADGRVSEAEIQAARALMDQMGLD------AEAR---REAIRLFNEG---KESDFGLEEYARQFRRACGGRPELLLQLLEF 79 (106)
T ss_pred ccCCcCHHHHHHHHHHHHHcCCC------HHHH---HHHHHHHHHh---CcCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 48999999999988888764321 1111 1223344332 2223678888888876543333 334566
Q ss_pred HhhhhccCCCCcccHHHHHH
Q psy6668 130 IFCLYDINGDGVISKDDLYN 149 (306)
Q Consensus 130 ~F~l~D~d~dG~Is~eEl~~ 149 (306)
++.+.-. ||.++..|-.-
T Consensus 80 l~~vA~A--DG~~~~~E~~~ 97 (106)
T cd07316 80 LFQIAYA--DGELSEAEREL 97 (106)
T ss_pred HHHHHHH--cCCCCHHHHHH
Confidence 6666543 68999888643
No 130
>KOG2243|consensus
Probab=69.74 E-value=3 Score=45.84 Aligned_cols=59 Identities=19% Similarity=0.239 Sum_probs=48.9
Q ss_pred HhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeecccCCCc
Q psy6668 130 IFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPRSPY 201 (306)
Q Consensus 130 ~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~~p~ 201 (306)
.|+.||.|+.|.|++.||.++|.... ..+..+++-++.-...|.+..++|.+|+.+..+
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k-------------~ytqse~dfllscae~dend~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHK-------------HYTQSEIDFLLSCAEADENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccc-------------cchhHHHHHHHHhhccCccccccHHHHHHHhcC
Confidence 48889999999999999999988521 225788888889999999999999999986543
No 131
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=67.84 E-value=16 Score=26.46 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=34.8
Q ss_pred CCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 103 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 103 dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
+-.|.|.-++..+..... ..++..+...|+.=..+.|+++||.+.++.+
T Consensus 6 sp~~~F~~L~~~l~~~l~---~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~I 54 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHLP---PSKMDLLQKHYEEFKKKKISREEFVRKLRQI 54 (70)
T ss_pred CCcccHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 346777777777776543 3445555555555578999999999999985
No 132
>PLN02952 phosphoinositide phospholipase C
Probab=64.29 E-value=42 Score=34.46 Aligned_cols=88 Identities=13% Similarity=0.064 Sum_probs=56.4
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhccC--ChHHHHHHHh
Q psy6668 54 RGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRG--SEEEKLRWIF 131 (306)
Q Consensus 54 dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~--~~ee~l~~~F 131 (306)
.|.++.++...+.+.|+.... ..+. .+..+|..+-.+ .+.|+.++|..+|...... ...+.+..+|
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~-----~~r~------ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~ 81 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEA-----EPPD------DVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELDCTLAEAQRIV 81 (599)
T ss_pred CCCcCHHHHHHHHHHhccccC-----CChH------HHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 467777777777777753221 1222 566699998654 3689999999999876552 2344455554
Q ss_pred hhh-------ccCCCCcccHHHHHHHHHH
Q psy6668 132 CLY-------DINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 132 ~l~-------D~d~dG~Is~eEl~~~l~~ 153 (306)
..+ ...+.+.++.+.|..+|..
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 82 EEVINRRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHHHhhccccccccccCcCHHHHHHHHcC
Confidence 433 1123356899999888864
No 133
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=62.89 E-value=23 Score=27.46 Aligned_cols=56 Identities=21% Similarity=0.294 Sum_probs=25.7
Q ss_pred HHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccC---CCCcccHHHHHHHHHHH
Q psy6668 94 VFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDIN---GDGVISKDDLYNIVSSV 154 (306)
Q Consensus 94 lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d---~dG~Is~eEl~~~l~~~ 154 (306)
=|..+-. +|.|....|-.++.+- ...+-...+|..+-.. ....|+++||+.++..+
T Consensus 35 RFd~La~--dG~L~rs~Fg~CIGM~---dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 35 RFDKLAK--DGLLPRSDFGECIGMK---DSKEFAGELFDALARRRGIKGDSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHH-B--TTBEEGGGHHHHHT-----S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHH
T ss_pred HHHHhCc--CCcccHHHHHHhcCCc---ccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHh
Confidence 3444433 5566666665555432 2333444444444211 13567777777766654
No 134
>KOG0042|consensus
Probab=60.64 E-value=19 Score=36.50 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=53.9
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH----------HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCC
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI----------RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGS 122 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~----------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~ 122 (306)
.++.+++.....+|..+|.++.|++...+.... ...+++.+..|.+-+|.+...||...++....+.
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~g~ 662 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKNGC 662 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhcCC
Confidence 578999999999999999888888877766665 5667778888888889999999988888665543
No 135
>KOG2557|consensus
Probab=59.79 E-value=29 Score=33.27 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHhccCCCCCCcccHHHHHhH-----------HHHHHHHHHhCC-CCCCcccHHHHHHHHHHhccCCh
Q psy6668 56 SGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQI-----------RYAHYVFNTLDH-NKTGFLNFEDFVKGLSILCRGSE 123 (306)
Q Consensus 56 ~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~-----------~~~~~lF~~~D~-d~dG~I~feEF~~~l~~~~~~~~ 123 (306)
.++.++++.+-...+..........+.+.+..+ ...+.+|...-. -++-.++++.++........+..
T Consensus 13 ~~naE~~~~l~~~kk~~~~ga~~k~t~dq~v~~~~~~~~~~l~e~~~q~~f~~vk~~~q~~~~~l~k~~~~~~~~~~gt~ 92 (427)
T KOG2557|consen 13 FINAETQKKLDDLKKLFVSGASNKQTNDQYVSYPVFQEYFGLSESLGQRMFDMVKQRRQDDKMTLEKLVIAKATYEKGTD 92 (427)
T ss_pred ccCHHHHHHHHHHhhccccccchhhhhhhhhhcccccchhhhhhhccceEeeeccCccCCccchHHHHhhHHhhhccCcc
Confidence 345555555555554433222245666666655 112222322221 12347999999988888888899
Q ss_pred HHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 124 EEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 124 ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
++..+.++...|.+++|.....++.+++..+.
T Consensus 93 dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vl 124 (427)
T KOG2557|consen 93 DQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVL 124 (427)
T ss_pred cHHHHHHHHHHhhccccccchhHHHHHHHHHh
Confidence 99999999999999999999999999988764
No 136
>KOG0035|consensus
Probab=59.45 E-value=20 Score=38.16 Aligned_cols=101 Identities=17% Similarity=0.090 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCCh--HHHHHHHhhhh---ccCCCCcccHHHHHHHHHHHHHHhccccc
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSE--EEKLRWIFCLY---DINGDGVISKDDLYNIVSSVYELMGTYAY 163 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~--ee~l~~~F~l~---D~d~dG~Is~eEl~~~l~~~~~~~g~~~~ 163 (306)
..+..+|+.++....|.++.++|+.++..+..... ++-+..+|++. |.+..|.++..++...|..-+....
T Consensus 747 ~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~---- 822 (890)
T KOG0035|consen 747 DELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLD---- 822 (890)
T ss_pred HHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhc----
Confidence 57788999999998999999999999987765433 33455555554 6666799999999999988665443
Q ss_pred cccChhhHHHHHHHHHHHhCCCCCCcEeeeecccCCCc
Q psy6668 164 RAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIPRSPY 201 (306)
Q Consensus 164 ~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~~~p~ 201 (306)
....+-..|+.+-.++. .|..++.+..-+.
T Consensus 823 -------~~~r~i~s~~d~~ktk~-~lL~eEL~~~~d~ 852 (890)
T KOG0035|consen 823 -------TELRAILAFEDWAKTKA-YLLLEELVRERDE 852 (890)
T ss_pred -------HHHHHHHHHHHHHcchh-HHHHHHHHhhccH
Confidence 24445555555544433 4555555553333
No 137
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=58.34 E-value=1.5e+02 Score=27.11 Aligned_cols=64 Identities=16% Similarity=0.200 Sum_probs=38.2
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHH---HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhcc
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEE---KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGT 160 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee---~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~ 160 (306)
+.++|+.- .....++++|+..+...+....+- -+..+|.+-= -||.++..|- .+++.+...+|.
T Consensus 97 a~~lf~~~---k~~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l~~vA~--ADG~l~~~E~-~~L~~Ia~~Lgi 163 (267)
T PRK09430 97 AQQAFREG---KEPDFPLREKLRQFRSVCGGRFDLLRMFLEIQIQAAF--ADGSLHPNER-QVLYVIAEELGF 163 (267)
T ss_pred HHHHHHHh---cccCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH--hcCCCCHHHH-HHHHHHHHHcCC
Confidence 34455543 344588999999887655322221 1355566543 4588999994 556666656664
No 138
>KOG2478|consensus
Probab=57.68 E-value=7.4 Score=38.02 Aligned_cols=38 Identities=45% Similarity=0.895 Sum_probs=32.5
Q ss_pred ccccccccCcceeeeeccCCCCCCCCCccccccccccC
Q psy6668 15 KLSNMINGSELVCRVKYNNTLPDIPFDCKFIAYPFEST 52 (306)
Q Consensus 15 ~l~~~~~~~ell~rv~~~~~~~~i~~~~~~l~~~fD~~ 52 (306)
++...-...+|+|+++|.+++|..||+++++.+.++..
T Consensus 8 ~~~q~~rk~~~i~pvky~N~LP~pPfd~Kfl~yP~~p~ 45 (452)
T KOG2478|consen 8 PLRQPPRKNDFICPVKYTNPLPDPPFDPKFLTYPFPPP 45 (452)
T ss_pred CCCCCccccccccCcccCCCCCCCCCCcccccCCCCcc
Confidence 45555568999999999999999999999999887665
No 139
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=57.22 E-value=53 Score=26.53 Aligned_cols=27 Identities=22% Similarity=0.441 Sum_probs=20.7
Q ss_pred HHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 127 LRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 127 l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
+.+++..||.+++|.|..-.++.++..
T Consensus 99 ln~Ll~vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 99 LNWLLNVYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HHHHHHHH-TT--SEEEHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCeeehhHHHHHHHH
Confidence 678999999999999999999887653
No 140
>KOG4286|consensus
Probab=53.83 E-value=79 Score=33.20 Aligned_cols=63 Identities=21% Similarity=0.355 Sum_probs=51.1
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVS 152 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~ 152 (306)
.-+..+++.||...+|.|..-+|..++..+++...+++++.+|+..-.++.-.+ ...|..+|.
T Consensus 470 ~~lN~llNvyD~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~ 532 (966)
T KOG4286|consen 470 MCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLH 532 (966)
T ss_pred HHHHHHHHhcccCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHH
Confidence 345778899999999999999999999999999999999999999976666554 444444443
No 141
>PRK05849 hypothetical protein; Provisional
Probab=50.77 E-value=1.4e+02 Score=31.83 Aligned_cols=99 Identities=15% Similarity=0.067 Sum_probs=53.8
Q ss_pred CCCCCHHHHHHHHHHHhcc---CCCCCCcccHHHHHhHHHHHHHHHHhC-CCCCCcccHHHHHHHHHHhcc---CChHHH
Q psy6668 54 RGSGNGKNITFIQQQKDNN---CLAGGRCDHKLDIKQIRYAHYVFNTLD-HNKTGFLNFEDFVKGLSILCR---GSEEEK 126 (306)
Q Consensus 54 dg~~s~~El~~l~~~F~~~---d~~~~G~I~~~eF~~~~~~~~lF~~~D-~d~dG~I~feEF~~~l~~~~~---~~~ee~ 126 (306)
.+.||.+|++.+......+ .-+..+.+-..++..+..++..++.+- .+-. ..+....++..+.. -+....
T Consensus 379 ~~~fs~~e~~~~~~~l~~lT~~~i~~~~~~~~~d~~~~~~l~~~~~~~~~~~~~---~l~~i~~lle~~~~~Gtl~Fa~~ 455 (783)
T PRK05849 379 PGGFSENEIKRIEFSLLKLTNRIISPKSGLFRKDLEKIEKLEERYKELLNSNLD---PLDKIYWLLEDCKRYGTLPFAGI 455 (783)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHhCCCCcccHhHHHHHHHHHHHHHHHHhccch---hHHHHHHHHHHHHHhCCchhHHH
Confidence 4789999999887766654 222223344445555433333333332 2212 23333333333222 234455
Q ss_pred HHHHhhhhc----cCCCCcccHHHHHHHHHHHH
Q psy6668 127 LRWIFCLYD----INGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 127 l~~~F~l~D----~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+.+|-... .-..|+++.+|...+|.++.
T Consensus 456 AR~~Fva~~~l~sl~~~g~~s~~~~~~f~~s~~ 488 (783)
T PRK05849 456 ARAAFVATQLLKSLVEIGALSQEELDAFLNSLN 488 (783)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhh
Confidence 566664332 34579999999999999864
No 142
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=50.13 E-value=26 Score=19.17 Aligned_cols=16 Identities=44% Similarity=0.706 Sum_probs=10.8
Q ss_pred ccCCCCcccHHHHHHH
Q psy6668 135 DINGDGVISKDDLYNI 150 (306)
Q Consensus 135 D~d~dG~Is~eEl~~~ 150 (306)
|.|+||.|+.-++..+
T Consensus 1 DvN~DG~vna~D~~~l 16 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALL 16 (21)
T ss_dssp -TTSSSSSSHHHHHHH
T ss_pred CCCCCCcCCHHHHHHH
Confidence 6778888887776543
No 143
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=50.06 E-value=68 Score=25.89 Aligned_cols=90 Identities=16% Similarity=0.133 Sum_probs=50.4
Q ss_pred cccHHHHHHHHHHhc-----c--CChHHHHHHHhhhhccCC--CCcccHHHHHHHHHHHHHHhcccccccc------Chh
Q psy6668 105 FLNFEDFVKGLSILC-----R--GSEEEKLRWIFCLYDING--DGVISKDDLYNIVSSVYELMGTYAYRAF------DSG 169 (306)
Q Consensus 105 ~I~feEF~~~l~~~~-----~--~~~ee~l~~~F~l~D~d~--dG~Is~eEl~~~l~~~~~~~g~~~~~~~------~~~ 169 (306)
.|-|.-|..++.... . .-.-..+..+|+....+. +..|+..|+..++..++........... .+.
T Consensus 14 ~IrfsaYRtA~KLR~lQk~~~l~lv~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~ 93 (127)
T PF09068_consen 14 NIRFSAYRTAMKLRFLQKRLCLDLVDLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDL 93 (127)
T ss_dssp T-SSHHHHHHHHHHHHHHHTTGGG--HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----H
T ss_pred hHHHHHhHHHHHHHHHHHHHhheeeeHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHH
Confidence 466777766655221 1 122334566777765544 3679999999999999854432211111 123
Q ss_pred hHHHHHHHHHHHhCCCCCCcEeeee
Q psy6668 170 MVAQRVEYLFQVSTKGFEMSILCSI 194 (306)
Q Consensus 170 ~~~~~v~~lf~~~D~d~DG~Is~~e 194 (306)
.++-.+.-++..+|.++.|+|+.-+
T Consensus 94 a~~L~ln~Ll~vyD~~rtG~I~vls 118 (127)
T PF09068_consen 94 AVDLLLNWLLNVYDSQRTGKIRVLS 118 (127)
T ss_dssp HHHHHHHHHHHHH-TT--SEEEHHH
T ss_pred HHHHHHHHHHHHhCCCCCCeeehhH
Confidence 4455667788999999999998633
No 144
>PF02761 Cbl_N2: CBL proto-oncogene N-terminus, EF hand-like domain; InterPro: IPR014741 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the EF hand-like domain.; GO: 0005509 calcium ion binding; PDB: 3OP0_A 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B ....
Probab=47.03 E-value=71 Score=24.06 Aligned_cols=50 Identities=12% Similarity=0.074 Sum_probs=37.7
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 104 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 104 G~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
-.|.+.+|...+.....-....+...+=..+|.-+||+|+.-||.-+.+-
T Consensus 21 ~IVPW~~F~~~L~~~h~~~~~~~~~aLk~TiDlT~n~~iS~FeFdvFtRl 70 (85)
T PF02761_consen 21 TIVPWSEFRQALQKVHPISSGLEAMALKSTIDLTCNDYISNFEFDVFTRL 70 (85)
T ss_dssp SEEEHHHHHHHHHHHS--SSHHHHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred eEeeHHHHHHHHHHhcCCCchHHHHHHHHHHhcccCCccchhhhHHHHHH
Confidence 46999999999998877555455555556789999999999999877765
No 145
>KOG2243|consensus
Probab=46.67 E-value=30 Score=38.81 Aligned_cols=19 Identities=16% Similarity=0.032 Sum_probs=9.3
Q ss_pred hccCCCCCCcccHHHHHhH
Q psy6668 70 DNNCLAGGRCDHKLDIKQI 88 (306)
Q Consensus 70 ~~~d~~~~G~I~~~eF~~~ 88 (306)
+.+|+++.|.|++.+|.++
T Consensus 4064 keydpdgkgiiskkdf~ka 4082 (5019)
T KOG2243|consen 4064 KEYDPDGKGIISKKDFHKA 4082 (5019)
T ss_pred hhcCCCCCccccHHHHHHH
Confidence 3344555555555555544
No 146
>KOG2871|consensus
Probab=46.22 E-value=19 Score=34.46 Aligned_cols=64 Identities=22% Similarity=0.168 Sum_probs=45.8
Q ss_pred hHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCCCCCcEeeeeccc
Q psy6668 123 EEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKGFEMSILCSISIP 197 (306)
Q Consensus 123 ~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d~DG~Is~~efv~ 197 (306)
..+.++++|+.+|..++|+|+-.-+..+|+........ .+.+.-+=+.+|...-|.|-...|+.
T Consensus 307 ~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse-----------~a~v~l~~~~l~pE~~~iil~~d~lg 370 (449)
T KOG2871|consen 307 PSEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSE-----------PAYVMLMRQPLDPESLGIILLEDFLG 370 (449)
T ss_pred CCHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccC-----------HHHHHHhcCccChhhcceEEeccccc
Confidence 46789999999999999999999999998874322211 34444455567777777776665543
No 147
>KOG4301|consensus
Probab=42.60 E-value=1.6e+02 Score=28.15 Aligned_cols=65 Identities=22% Similarity=0.393 Sum_probs=53.2
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHH
Q psy6668 90 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVY 155 (306)
Q Consensus 90 ~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~ 155 (306)
.+.-+...+|..+.|.++----..++..++.+...++++.+|.+.. |.+|.+..-.+.++++.+.
T Consensus 111 llaflLaA~ds~~~g~~~vfavkialatlc~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evl 175 (434)
T KOG4301|consen 111 LLAFLLAAEDSEGQGKQQVFAVKIALATLCGGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVL 175 (434)
T ss_pred HHHHHHhhcCccCCCCceeecchhhhhhhccchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHH
Confidence 4455677889999999988878888888899999999999999984 6778887777777777764
No 148
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=41.95 E-value=90 Score=21.87 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=20.3
Q ss_pred CCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHH
Q psy6668 77 GRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKG 114 (306)
Q Consensus 77 ~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~ 114 (306)
+|.+...+|.. .+.+.+..||...-|.-++.+|+..
T Consensus 21 ~g~v~ls~l~~--~~~~~~~~f~~~~yG~~~l~~ll~~ 56 (74)
T PF12872_consen 21 DGWVSLSQLGQ--EYKKKYPDFDPRDYGFSSLSELLES 56 (74)
T ss_dssp TSSEEHHHHHH--HHHHHHTT--TCCTTSSSHHHHHHT
T ss_pred CceEEHHHHHH--HHHHHCCCCCccccCCCcHHHHHHh
Confidence 45666666665 4444555566666666666666643
No 149
>KOG0998|consensus
Probab=41.84 E-value=9.9 Score=40.64 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=52.5
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHH
Q psy6668 91 AHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 91 ~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~ 153 (306)
...+|...|.+++|.|++.++...+.. .+.....+..++.+.|.++.|.|+++|+.-.+..
T Consensus 285 ~~~if~q~d~~~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 285 YSKIFSQVDKDNDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred HHHHHHhccccCCCccccccccccccc--CCCChhhhhhhhhhcchhccCcccccccchhhhh
Confidence 444899999999999999999887775 5677889999999999999999999988766554
No 150
>KOG4403|consensus
Probab=41.41 E-value=79 Score=31.00 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHhhhhccCCCCcccHHHHHHHHHHH
Q psy6668 89 RYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSV 154 (306)
Q Consensus 89 ~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~ 154 (306)
+.++.+-+.+|.|.+|.|+.+|=-.+|..-.+ .....+-...|-- .|..|+.+||.+++..-
T Consensus 68 EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~~~~kr~~~fH~----dD~~ItVedLWeaW~~S 130 (575)
T KOG4403|consen 68 EAIRDIHRQMDDDHNGSIDVEESDEFLREDMKYRDSTRKRSEKFHG----DDKHITVEDLWEAWKES 130 (575)
T ss_pred HHHHHHHHhcccccCCCcccccchHHHHHHhhcccchhhhhhhccC----CccceeHHHHHHHHHhh
Confidence 45666999999999999999886666653222 2222233334543 46789999999998863
No 151
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=40.28 E-value=58 Score=24.39 Aligned_cols=38 Identities=26% Similarity=0.494 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHhccC--------------------ChHHHHHHHhhhhccCCCCcc
Q psy6668 105 FLNFEDFVKGLSILCRG--------------------SEEEKLRWIFCLYDINGDGVI 142 (306)
Q Consensus 105 ~I~feEF~~~l~~~~~~--------------------~~ee~l~~~F~l~D~d~dG~I 142 (306)
.++|++++.-+..+++. +.++++..+|++|-.|++-.+
T Consensus 19 ~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~~EL~EA~rl~~~n~~~~l 76 (83)
T cd06404 19 SISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQMELEEAFRLYELNKDSEL 76 (83)
T ss_pred CcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCHHHHHHHHHHHHhcCcccE
Confidence 56677777666655431 345677777777776665443
No 152
>PLN02228 Phosphoinositide phospholipase C
Probab=37.19 E-value=1.3e+02 Score=30.87 Aligned_cols=49 Identities=14% Similarity=0.246 Sum_probs=24.0
Q ss_pred cccHHHHHHHHHHhccC--ChHHHHHHHhhhhccC----CCCcccHHHHHHHHHH
Q psy6668 105 FLNFEDFVKGLSILCRG--SEEEKLRWIFCLYDIN----GDGVISKDDLYNIVSS 153 (306)
Q Consensus 105 ~I~feEF~~~l~~~~~~--~~ee~l~~~F~l~D~d----~dG~Is~eEl~~~l~~ 153 (306)
.|+.++|..+|...... ...+.+..+|..|... ..|.++.+.|..+|..
T Consensus 38 ~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 38 KMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred ccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 45555555555543321 2233445555555322 2355666666666543
No 153
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=36.56 E-value=1.9e+02 Score=24.03 Aligned_cols=57 Identities=12% Similarity=0.208 Sum_probs=43.5
Q ss_pred HHHHHHHHhccCCCCCCcccHHHHHhH-------------HHHHHHHHHhCCCCCCcccHHHHHHHHHHh
Q psy6668 62 ITFIQQQKDNNCLAGGRCDHKLDIKQI-------------RYAHYVFNTLDHNKTGFLNFEDFVKGLSIL 118 (306)
Q Consensus 62 l~~l~~~F~~~d~~~~G~I~~~eF~~~-------------~~~~~lF~~~D~d~dG~I~feEF~~~l~~~ 118 (306)
|+.++..|..+-......|+-..|..+ ..++-+|..+-..+...|+|++|+.+|..+
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 456677776655555568999999988 788999999876666789999999998754
No 154
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=36.27 E-value=48 Score=23.82 Aligned_cols=49 Identities=14% Similarity=0.109 Sum_probs=32.8
Q ss_pred HHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHh
Q psy6668 126 KLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 182 (306)
Q Consensus 126 ~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~ 182 (306)
.+..+...++..-.--|-..+++.++..++...|... .++.++.+|+.+
T Consensus 24 ~l~~a~~~l~~~~~~dl~a~~L~~A~~~L~~ItG~~~--------~ediLd~IFs~F 72 (73)
T PF12631_consen 24 HLEDALEALENGLPLDLVAEDLREALESLGEITGEVV--------TEDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHCTSS----------HHHHHHHHCTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhCCCC--------hHHHHHHHHHhh
Confidence 4555555555444445667789999999998888643 488888888754
No 155
>KOG4004|consensus
Probab=35.46 E-value=15 Score=32.23 Aligned_cols=47 Identities=19% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHH
Q psy6668 103 TGFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIV 151 (306)
Q Consensus 103 dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l 151 (306)
||.++-.|+.-+-+.+. +.+.-+...|.-.|.|+||+|+.+|+..-+
T Consensus 202 d~~~sh~el~pl~ap~i--pme~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 202 DGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred cccccccccccccCCcc--cHHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 45555555433222111 345567788999999999999999986543
No 156
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=33.97 E-value=98 Score=24.03 Aligned_cols=59 Identities=10% Similarity=0.108 Sum_probs=42.1
Q ss_pred HHHHHHHHHhccCCCCCCcccHHHHHhH-------HHHHHHHHHhCCC---CCCcccHHHHHHHHHHhccC
Q psy6668 61 NITFIQQQKDNNCLAGGRCDHKLDIKQI-------RYAHYVFNTLDHN---KTGFLNFEDFVKGLSILCRG 121 (306)
Q Consensus 61 El~~l~~~F~~~d~~~~G~I~~~eF~~~-------~~~~~lF~~~D~d---~dG~I~feEF~~~l~~~~~~ 121 (306)
....+.++|..+.. +|.+.+..|..+ +++.++|..+-.- ....|+.+|+..++..+...
T Consensus 28 ~W~~VE~RFd~La~--dG~L~rs~Fg~CIGM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qisD~ 96 (100)
T PF08414_consen 28 GWKEVEKRFDKLAK--DGLLPRSDFGECIGMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQISDQ 96 (100)
T ss_dssp -HHHHHHHHHHH-B--TTBEEGGGHHHHHT--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHHH--
T ss_pred CHHHHHHHHHHhCc--CCcccHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHhhcc
Confidence 36677788888876 669999999998 7888888876331 24679999999988866543
No 157
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=33.46 E-value=31 Score=24.46 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=31.3
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHHhccccc--cc-cChhhHHHHHHHHHHHhCCC
Q psy6668 132 CLYDINGDGVISKDDLYNIVSSVYELMGTYAY--RA-FDSGMVAQRVEYLFQVSTKG 185 (306)
Q Consensus 132 ~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~--~~-~~~~~~~~~v~~lf~~~D~d 185 (306)
++||...+.||+.+++.++++. |.... +. -.++.+...+-+++-+....
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~-----g~~~~V~D~ktgeDiT~~iL~QIi~e~e~~ 61 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVRE-----GEDFKVVDAKTGEDITRSILLQIILEEESK 61 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHC-----CCeEEEEECCCCcccHHHHHHHHHHHHHhc
Confidence 5799999999999999999886 22111 11 12344566666665554433
No 158
>KOG4004|consensus
Probab=32.47 E-value=23 Score=31.05 Aligned_cols=50 Identities=10% Similarity=0.154 Sum_probs=37.4
Q ss_pred HHhccCCC-CCCcccHHHHHhH--------HHHHHHHHHhCCCCCCcccHHHHHHHHHH
Q psy6668 68 QKDNNCLA-GGRCDHKLDIKQI--------RYAHYVFNTLDHNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 68 ~F~~~d~~-~~G~I~~~eF~~~--------~~~~~lF~~~D~d~dG~I~feEF~~~l~~ 117 (306)
+|..+|.. .+|+++-.|+.-+ .-+.+.|...|.|+||.|..+||-..+..
T Consensus 192 qf~qld~~p~d~~~sh~el~pl~ap~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~gi 250 (259)
T KOG4004|consen 192 QFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 250 (259)
T ss_pred eeccccCCCccccccccccccccCCcccHHhhchhhhhcccCCCCCceeHHHhhcccCc
Confidence 34444432 3678888888776 45678999999999999999999776553
No 159
>cd07177 terB_like tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.
Probab=31.43 E-value=2e+02 Score=21.02 Aligned_cols=84 Identities=12% Similarity=0.080 Sum_probs=43.4
Q ss_pred CCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHhh
Q psy6668 54 RGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIFC 132 (306)
Q Consensus 54 dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F~ 132 (306)
||.++..|++.+.+.+.....-. .-+.+++. .++...-.+ ..+...+...+..+.. .....-++.++.
T Consensus 13 DG~i~~~E~~~i~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~r~~~l~~~~~ 81 (104)
T cd07177 13 DGRVDEEEIAAIEALLRRLPLLD--AEERAELI------ALLEEPLAE---AGDLAALAALLKELPDAELREALLAALWE 81 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCCC--HHHHHHHH------HHHHHHHHh---cccHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 89999999998888777643210 11222222 223222111 2234455554444332 223344556666
Q ss_pred hhccCCCCcccHHHHHHH
Q psy6668 133 LYDINGDGVISKDDLYNI 150 (306)
Q Consensus 133 l~D~d~dG~Is~eEl~~~ 150 (306)
+.. .||.++..|...+
T Consensus 82 ia~--aDG~~~~~E~~~l 97 (104)
T cd07177 82 VAL--ADGELDPEERALL 97 (104)
T ss_pred HHH--hccCCCHHHHHHH
Confidence 654 5688888776543
No 160
>KOG1707|consensus
Probab=30.11 E-value=2.2e+02 Score=29.28 Aligned_cols=82 Identities=12% Similarity=0.149 Sum_probs=53.3
Q ss_pred CCCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhC--------------CCCCCcccHHHHHHHHHH
Q psy6668 52 TRRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLD--------------HNKTGFLNFEDFVKGLSI 117 (306)
Q Consensus 52 ~~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D--------------~d~dG~I~feEF~~~l~~ 117 (306)
.....++..-++.+...|..+|.++||.++.+||.. +|..+- .+..|.+++.-|+..|+.
T Consensus 304 ~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~------LF~~~P~~pW~~~~~~~~t~~~~~G~ltl~g~l~~WsL 377 (625)
T KOG1707|consen 304 DQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKD------LFSTAPGSPWTSSPYKDSTVKNERGWLTLNGFLSQWSL 377 (625)
T ss_pred CcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHH------HhhhCCCCCCCCCcccccceecccceeehhhHHHHHHH
Confidence 334556777777777888888888888888888877 444321 124689999999998887
Q ss_pred hccCCh-HHHHHHHhhhhccCCC
Q psy6668 118 LCRGSE-EEKLRWIFCLYDINGD 139 (306)
Q Consensus 118 ~~~~~~-ee~l~~~F~l~D~d~d 139 (306)
+..-+. ..--..+|-.|..+..
T Consensus 378 ~Tlld~~~t~~~L~Ylgf~~~~~ 400 (625)
T KOG1707|consen 378 MTLLDPRRTLEYLAYLGFPTDAG 400 (625)
T ss_pred HhhccHHHHHHHHHhcCCccccc
Confidence 654222 2223345666665543
No 161
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=29.19 E-value=94 Score=24.71 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=41.9
Q ss_pred CCCCCCHHHHHHHHHHHhccCCCCCCcccHHHHHhHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhcc-CChHHHHHHHh
Q psy6668 53 RRGSGNGKNITFIQQQKDNNCLAGGRCDHKLDIKQIRYAHYVFNTLDHNKTGFLNFEDFVKGLSILCR-GSEEEKLRWIF 131 (306)
Q Consensus 53 ~dg~~s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~~~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~-~~~ee~l~~~F 131 (306)
-||.++..|+..+.+.+..... ++. .....++..++.-....+++.+|+..+..... .....-++.++
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~-----~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~r~~ll~~l~ 104 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFG-----LSP------EEAEELIELADELKQEPIDLEELLRELRDSLSPEEREDLLRMLI 104 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGC-----GSC------HHHHHHHHHHCHHHHHCCHHHHHHHHHCTS--HHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhhC-----CCH------HHHHHHHHHHHHHHhccccHHHHHHHHHHhhchHHHHHHHHHHH
Confidence 4778888888877776632211 111 12333444444433346778888766653211 12233466677
Q ss_pred hhhccCCCCcccHHHH
Q psy6668 132 CLYDINGDGVISKDDL 147 (306)
Q Consensus 132 ~l~D~d~dG~Is~eEl 147 (306)
.+.-. ||.++..|-
T Consensus 105 ~ia~A--DG~~~~~E~ 118 (140)
T PF05099_consen 105 AIAYA--DGEISPEEQ 118 (140)
T ss_dssp HHCTC--TTC-SCCHH
T ss_pred HHHhc--CCCCCHHHH
Confidence 77655 467776664
No 162
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=28.43 E-value=42 Score=26.82 Aligned_cols=25 Identities=24% Similarity=0.547 Sum_probs=17.0
Q ss_pred HHHHHHhCCCCCCcccHHHHHHHHH
Q psy6668 92 HYVFNTLDHNKTGFLNFEDFVKGLS 116 (306)
Q Consensus 92 ~~lF~~~D~d~dG~I~feEF~~~l~ 116 (306)
+++++.+-.|..|.|.|.||+.-+.
T Consensus 10 drLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 10 DRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp HHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred hhhhhhCcCCccCCEeHHHHHHHcc
Confidence 3388888889999999999976554
No 163
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=27.45 E-value=1.9e+02 Score=23.78 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=24.9
Q ss_pred CCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCC
Q psy6668 138 GDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKG 185 (306)
Q Consensus 138 ~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d 185 (306)
..+.|+.+-|+.+|+.+.+ . +.+++.+.++|..+-..
T Consensus 45 ~~~~Id~egF~~Fm~~yLe---~--------d~P~~lc~hLF~sF~~~ 81 (138)
T PF14513_consen 45 PEEPIDYEGFKLFMKTYLE---V--------DLPEDLCQHLFLSFQKK 81 (138)
T ss_dssp ETTEE-HHHHHHHHHHHTT------------S--HHHHHHHHHHS---
T ss_pred CCCCcCHHHHHHHHHHHHc---C--------CCCHHHHHHHHHHHhCc
Confidence 4569999999999998632 2 34689999999988543
No 164
>PLN02222 phosphoinositide phospholipase C 2
Probab=26.98 E-value=2.1e+02 Score=29.43 Aligned_cols=54 Identities=15% Similarity=0.136 Sum_probs=28.3
Q ss_pred CHHHHHHHHHHHhccCCCCCCcccHHHHHhH------------HHHHHHHHHhCC-CCCCcccHHHHHHHHH
Q psy6668 58 NGKNITFIQQQKDNNCLAGGRCDHKLDIKQI------------RYAHYVFNTLDH-NKTGFLNFEDFVKGLS 116 (306)
Q Consensus 58 s~~El~~l~~~F~~~d~~~~G~I~~~eF~~~------------~~~~~lF~~~D~-d~dG~I~feEF~~~l~ 116 (306)
...|+..++..|.. ++.++.++|..+ ..+..+++.+.. ...+.++++.|..+|.
T Consensus 23 ~~~ei~~if~~~~~-----~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~ 89 (581)
T PLN02222 23 APREIKTIFEKYSE-----NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLF 89 (581)
T ss_pred CcHHHHHHHHHhcC-----CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhc
Confidence 45577666666631 236666666654 234445554321 1234466666655553
No 165
>COG5562 Phage envelope protein [General function prediction only]
Probab=25.47 E-value=1.4e+02 Score=24.49 Aligned_cols=17 Identities=6% Similarity=0.266 Sum_probs=8.6
Q ss_pred CCCCcccHHHHHHHHHH
Q psy6668 137 NGDGVISKDDLYNIVSS 153 (306)
Q Consensus 137 d~dG~Is~eEl~~~l~~ 153 (306)
+..|..+.+|++..+-.
T Consensus 84 ~qsGqttF~ef~~~la~ 100 (137)
T COG5562 84 HQSGQTTFEEFCSALAE 100 (137)
T ss_pred HhcCCccHHHHHHHHHh
Confidence 34455555555555444
No 166
>PLN02230 phosphoinositide phospholipase C 4
Probab=23.94 E-value=2.9e+02 Score=28.50 Aligned_cols=60 Identities=15% Similarity=0.078 Sum_probs=28.9
Q ss_pred HHHHHhCCCCCCcccHHHHHHHHHHhccC---ChHHHHHHHhhhh-------ccCCCCcccHHHHHHHHHH
Q psy6668 93 YVFNTLDHNKTGFLNFEDFVKGLSILCRG---SEEEKLRWIFCLY-------DINGDGVISKDDLYNIVSS 153 (306)
Q Consensus 93 ~lF~~~D~d~dG~I~feEF~~~l~~~~~~---~~ee~l~~~F~l~-------D~d~dG~Is~eEl~~~l~~ 153 (306)
.+|..+..++ +.++.++|..+|...... ...+.++.++..+ ..-..+.++.+.|..+|..
T Consensus 33 ~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 33 DLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred HHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 3555543222 456666666666554321 1233333333322 1123445777777777654
No 167
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=22.74 E-value=1.5e+02 Score=23.23 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=28.1
Q ss_pred hhhccCCCCcccHHHHHHHHHHHHHHhcccc--ccc-cChhhHHHHHHHHHHHhCCCCC
Q psy6668 132 CLYDINGDGVISKDDLYNIVSSVYELMGTYA--YRA-FDSGMVAQRVEYLFQVSTKGFE 187 (306)
Q Consensus 132 ~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~--~~~-~~~~~~~~~v~~lf~~~D~d~D 187 (306)
++||+..+-||+.+++..+++. |... -+. -.++.+...+-.++-+....+.
T Consensus 10 RLYDT~tS~YITLedi~~lV~~-----g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~ 63 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVRE-----GREFQVVDSKSGDDLTRSILLQIIAEEESGGE 63 (107)
T ss_pred cccCCCccceeeHHHHHHHHHC-----CCeEEEEECCCCchhHHHHHHHHHHHHHhCCC
Confidence 4677777777777777777664 2111 111 1234455566666655544443
No 168
>KOG1265|consensus
Probab=22.24 E-value=1.9e+02 Score=31.29 Aligned_cols=87 Identities=13% Similarity=0.139 Sum_probs=0.0
Q ss_pred ccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHhCCC
Q psy6668 106 LNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVSTKG 185 (306)
Q Consensus 106 I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~D~d 185 (306)
.+|+.|..++..+| ...++..+|..+-.+..-|++.++|..++..-. ....+..-+-.......+..+++.+..|
T Consensus 205 f~~e~f~~~l~klc---pR~eie~iF~ki~~~~kpylT~~ql~dfln~~Q--rDpRLNeilfp~~~~~r~~~liekyEp~ 279 (1189)
T KOG1265|consen 205 FTLEKFYRLLNKLC---PRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQ--RDPRLNEILFPPADPRRIQSLIEKYEPN 279 (1189)
T ss_pred ccHHHHHHHHHhcC---CchhHHHHHHHhccCCCccccHHHHHHHHhhhc--cCcchhhhhcCCCCHHHHHHHHHHcCCc
Q ss_pred C----CCcEeeeeccc
Q psy6668 186 F----EMSILCSISIP 197 (306)
Q Consensus 186 ~----DG~Is~~efv~ 197 (306)
. .|.++-+-|++
T Consensus 280 ~~~a~~gqms~dgf~r 295 (1189)
T KOG1265|consen 280 SDNAEKGQMSTDGFVR 295 (1189)
T ss_pred hhhhhccccchhhhHH
No 169
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=21.89 E-value=1.8e+02 Score=18.81 Aligned_cols=28 Identities=18% Similarity=0.330 Sum_probs=20.8
Q ss_pred HHHHHhhhhc-c-CCCCcccHHHHHHHHHH
Q psy6668 126 KLRWIFCLYD-I-NGDGVISKDDLYNIVSS 153 (306)
Q Consensus 126 ~l~~~F~l~D-~-d~dG~Is~eEl~~~l~~ 153 (306)
.+-.+|..|- . .....+++.||+.++..
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~ 36 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEK 36 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHH
Confidence 4566788774 2 33578999999999886
No 170
>KOG0506|consensus
Probab=20.66 E-value=2.6e+02 Score=28.06 Aligned_cols=115 Identities=11% Similarity=0.135 Sum_probs=72.4
Q ss_pred HHHHHHHHhCCCCCCcccHHHHHHHHHHhccCChHHHHHHHhhh---hcc----C-CCCcccHHHHHHHHHHHHHHhccc
Q psy6668 90 YAHYVFNTLDHNKTGFLNFEDFVKGLSILCRGSEEEKLRWIFCL---YDI----N-GDGVISKDDLYNIVSSVYELMGTY 161 (306)
Q Consensus 90 ~~~~lF~~~D~d~dG~I~feEF~~~l~~~~~~~~ee~l~~~F~l---~D~----d-~dG~Is~eEl~~~l~~~~~~~g~~ 161 (306)
.-+.+|..|-..+.+++.+--|+.+|....-...+.+++.+|.. +|. + .-++++++-|++.+..........
T Consensus 87 leDLLFyLiaegq~ekipihKFiTALkstGLrtsDPRLk~mMd~mKd~dq~~~e~S~gw~LdKDlFKkcI~sSI~lvSqA 166 (622)
T KOG0506|consen 87 LEDLLFYLIAEGQSEKIPIHKFITALKSTGLRTSDPRLKDMMDEMKDVDQEENESSSGWLLDKDLFKKCIFSSIVLVSQA 166 (622)
T ss_pred hhhhhhHHhhcCCcCcccHHHHHHHHHHcCCCcCCchHHHHHHHHHHHHhhhcccccceeecHHHHHHhhccchhHHHHH
Confidence 44567777766667999999999999987655555555555543 343 2 246899999998876543322111
Q ss_pred cc-c-ccCh-hhHHHHHHHHHHHhCCCCCCcE-ee-eecccCCCcccc
Q psy6668 162 AY-R-AFDS-GMVAQRVEYLFQVSTKGFEMSI-LC-SISIPRSPYSLV 204 (306)
Q Consensus 162 ~~-~-~~~~-~~~~~~v~~lf~~~D~d~DG~I-s~-~efv~~~p~ll~ 204 (306)
+. . -+.+ +.....+..+|+..-.-..|++ +| -+..+.+|.+-.
T Consensus 167 LrkqmVIPdw~~Fts~I~tIFEscke~seG~vA~YIPQLar~sPdlW~ 214 (622)
T KOG0506|consen 167 LRKQMVIPDWEEFTSHIDTIFESCKESSEGKVATYIPQLARQSPDLWG 214 (622)
T ss_pred HhcCccCCcHHHHHHHHHHHHHHHHhcCCccHHHhhHHHhccCCccce
Confidence 11 1 1111 3346788999999888778865 34 455556666543
No 171
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=20.48 E-value=3.8e+02 Score=20.16 Aligned_cols=70 Identities=9% Similarity=0.099 Sum_probs=52.5
Q ss_pred CcccHHHHHHHHHHhccCChHHHHHHHhhhhccCCCCcccHHHHHHHHHHHHHHhccccccccChhhHHHHHHHHHHHh
Q psy6668 104 GFLNFEDFVKGLSILCRGSEEEKLRWIFCLYDINGDGVISKDDLYNIVSSVYELMGTYAYRAFDSGMVAQRVEYLFQVS 182 (306)
Q Consensus 104 G~I~feEF~~~l~~~~~~~~ee~l~~~F~l~D~d~dG~Is~eEl~~~l~~~~~~~g~~~~~~~~~~~~~~~v~~lf~~~ 182 (306)
..|+.+|++.......-.-..+.++.+..++-.+.=...+.+|-..+++.+-...+ ..+...+..+|..+
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkeia~iT~---------p~ta~~vn~Lf~qf 82 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEIAKITS---------PQTAKQVNELFEQF 82 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHH
Confidence 35889999888877666777788888888887777778888888888888654433 23467777888765
Done!