BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy667
         (392 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|67773380|gb|AAY81947.1| cysteine protease 9 [Paragonimus westermani]
          Length = 322

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/336 (35%), Positives = 171/336 (50%), Gaps = 52/336 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K         Y R   + ++VE++     K    P+  DWR+K       +Q +CGSC
Sbjct: 84  AAK---------YLRAAVNNDQVERVRPTGLK--AAPERMDWREKGAVTAVENQGSCGSC 132

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS AG                        +EGQ+ IKTG+LV  SK QLV+C +   G
Sbjct: 133 WAFSAAGN-----------------------VEGQWFIKTGQLVSLSKQQLVDCDRVAEG 169

Query: 237 CDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS-- 293
           C+G +   S +E  H  GLESE DYPY    G +  CA +K K  L    D L   G+  
Sbjct: 170 CNGGWPVSSYLEIKHMGGLESESDYPYV---GAEQTCALNKEK--LLAKIDDLIVLGAYE 224

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
           E     L ++GPLS LLN+  +  Y    +    E C   +L HAVL VGY K+ ++PYW
Sbjct: 225 EEHAAYLAEHGPLSTLLNAVALQHYQSGVLNPTYEECPDTELNHAVLTVGYDKEGDMPYW 284

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 285 IIKNSWGTDWGEKGYFRLFRGDYTCGINRMATSAII 320


>gi|67773370|gb|AAY81942.1| cysteine protease 3 [Paragonimus westermani]
          Length = 321

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 170/335 (50%), Gaps = 50/335 (14%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS AG                        +EGQ+ IKTG+LV  SK QLV+C +   G
Sbjct: 133 WAFSTAGN-----------------------VEGQWFIKTGQLVSLSKQQLVDCDRAADG 169

Query: 237 CDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    SE 
Sbjct: 170 CNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALGPSED 225

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
                L ++GPLS LLN+  +  Y    I  + E CSP DL HAVL VGY K+ ++PYW+
Sbjct: 226 DNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEGDMPYWI 285

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+F++ RG+  CGI ++   A I
Sbjct: 286 IKNSWNVEWGEKGYFRLYRGDGTCGINRMPTSAII 320


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 174/347 (50%), Gaps = 57/347 (16%)

Query: 62   ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 112
            E IL  F  F+ K  + Y N EE + RF+ FK + +   E         RYG ++F+D  
Sbjct: 727  EEIL--FHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTD-- 782

Query: 113  PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
                L K  FK      +  +     +  M M    D  +P  +DWR  NV  P  DQ +
Sbjct: 783  ----LTKAEFKARHLGLKPTLKSENDI-PMPMATIPDIELPSDYDWRHHNVVTPVKDQGS 837

Query: 173  CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
            CGSCWAFS+ G                        +EGQYAIK G+L+  S+ +LV+C K
Sbjct: 838  CGSCWAFSVTGN-----------------------IEGQYAIKHGELLSLSEQELVDCDK 874

Query: 233  QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK--LFTGKDFLH 289
              SGC+G   + +     +  GLE E DYPY   + E  KC ++K+KVK  + +G   L+
Sbjct: 875  LDSGCNGGLPDTAYRAIEELGGLELESDYPY---DAEDEKCHFNKNKVKVNIVSG---LN 928

Query: 290  FNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-- 346
               +ET M + L K GP+S+ +N++ +  Y G         CSP  L H VL+VGYG   
Sbjct: 929  ITSNETQMAQWLVKNGPMSIGINANAMQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKF 988

Query: 347  ----QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                +  +PYW+++NSWGP   ++G++++ RG+  CG+ ++   A +
Sbjct: 989  YPIFKKTMPYWIIKNSWGPRWGEQGYYRVYRGDGTCGVNKMVTSAVV 1035


>gi|67773374|gb|AAY81944.1| cysteine protease 6 [Paragonimus westermani]
          Length = 325

 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 168/337 (49%), Gaps = 55/337 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 116
           E ++ F    G+ YAND++ K RF  FK         Q   +   RYG ++FSD +PEE 
Sbjct: 30  ELYEQFKRDYGKSYANDDDEK-RFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTPEEF 88

Query: 117 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
             K             ++ R  ++VE++ +   K    P++ DWR+     P  DQ +CG
Sbjct: 89  AAK------------FLSSRFDDQVERVQLNDLK--AAPESVDWRELGAVAPVEDQGSCG 134

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+AG                        +EGQ+ +KTG+LV  SK QLV+C  Q 
Sbjct: 135 SCWAFSVAGN-----------------------VEGQWFLKTGQLVSLSKQQLVDCDVQD 171

Query: 235 SGCDGCFFEPSI--EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
           SGCDG +  P+   E     GLE+++DYPY    G +  C  D+SK+        +    
Sbjct: 172 SGCDGGY-PPTTYGEIIRMGGLEAQRDYPYV---GREQPCKLDESKLLAKINSSIVLEAN 227

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            +     + ++GP+S  +N+  +  Y       +   C P  L H VL VGYG +D +PY
Sbjct: 228 EKKQAAYIAEHGPMSSGINAVTLQFYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGVPY 287

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           W+++NSWG    ++G+F++ RG+  CGIE++   A I
Sbjct: 288 WIIKNSWGTGWGEKGYFRLYRGDGTCGIEKVVSSAII 324


>gi|56718883|gb|AAW28152.1| westerpain-10 [Paragonimus westermani]
          Length = 327

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 175/354 (49%), Gaps = 48/354 (13%)

Query: 46  ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---- 101
           A + + AI  S     ++  E ++ F    G+ YAN+++ K RF  FK +  +  +    
Sbjct: 10  ALIVSCAIAVSAGRVPDSARELYEQFKRGYGKVYANEDDQK-RFAIFKDNLVRAQKLQLK 68

Query: 102 -----RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAW 156
                RYG ++FSD +PEE   K         Y     + ++V++M     K    P+  
Sbjct: 69  DQGTARYGVTQFSDLTPEEFAAK---------YLSAPVNDDQVKRMRPTGLK--AAPERI 117

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K       +Q +CGSCWAFS AG                        +EGQ+ IKT
Sbjct: 118 DWRAKGAVTAVENQGSCGSCWAFSTAGN-----------------------VEGQWFIKT 154

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYD 275
           G+LV  SK QLV+C +   GC+G +   S +E  +  GLESE DYPY    G +  CA +
Sbjct: 155 GQLVSLSKQQLVDCDRAAQGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALN 211

Query: 276 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 335
           K K+        +     E     L ++GPLS LLN+  +  Y    ++   + C   +L
Sbjct: 212 KEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQHYQSGVLKPTFDECPDTEL 271

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            HAVL VGY K+ ++PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 272 NHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 325


>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
 gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
          Length = 434

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 174/358 (48%), Gaps = 56/358 (15%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKH 100
           T  I+  +   NE +L++FK F++K  + Y + EE K+RF  F+ +           K  
Sbjct: 116 TKKIDNEIINKNEYLLQSFKDFVLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGT 175

Query: 101 ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWR 159
            +YG +EFSD S  E     G K             +K E  L   E  D  +PD +DWR
Sbjct: 176 AQYGITEFSDLSVTEFKNYLGLK-------------KKPESKLPTAEIPDVKLPDNFDWR 222

Query: 160 KKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKL 219
             N   P  +Q +CGSCWAFS+ G                        +EG +AIK  +L
Sbjct: 223 HYNAVTPVKNQGSCGSCWAFSVTGN-----------------------IEGLWAIKKHEL 259

Query: 220 VEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK 278
           +  S+ +L++C K  +GC+G +   + E   +  GLE+E DYPY+    E  KC  +K++
Sbjct: 260 LSLSEQELIDCDKIDNGCNGGYMPETYEAIMKLGGLETETDYPYE---AENEKCNLNKTE 316

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           +K+              + K LYK GP+S  LN++ +  Y G         C+P +  H 
Sbjct: 317 IKVKINGAVNLTKSELDIAKWLYKNGPVSAGLNANAMQFYLGGISHPPKILCNPEEQDHG 376

Query: 339 VLLVGYGKQDN------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +L+VGYG   +      IPYW+++NSWG    ++G++++ RG+  CGI Q+   A I+
Sbjct: 377 ILIVGYGIHKSSILKRTIPYWIIKNSWGKHWGEKGYYRLYRGSGVCGINQMVSSALIN 434


>gi|56718881|gb|AAW28151.1| westerpain-1 [Paragonimus westermani]
          Length = 322

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 167/334 (50%), Gaps = 48/334 (14%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 83

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 84  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 132

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS AG                        +EGQ+ IKTG+LV  SK QLV+C +   G
Sbjct: 133 WAFSTAGN-----------------------VEGQWFIKTGQLVSLSKQQLVDCDRAAQG 169

Query: 237 CDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G +   S +E  +  GLESE DYPY    G +  CA +K K+        +     E 
Sbjct: 170 CNGGWPASSYLEIMYMGGLESESDYPYV---GVEQTCALNKEKLVAKIDDSIVLGPEEED 226

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
               L ++GPLS LLN+  +  Y    ++   E C   +L HAVL VGY K+ ++PYW++
Sbjct: 227 HAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEECPDTELNHAVLTVGYDKEGDMPYWII 286

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 287 KNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 320


>gi|67773382|gb|AAY81948.1| cysteine protease 11 [Paragonimus westermani]
          Length = 322

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 170/338 (50%), Gaps = 54/338 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 25  ELYEQFKRDYGKVYANEDDQK-RFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPEEF 83

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVPDAWDWRKKNVTGPAGDQAACG 174
             K         Y     + ++VE+    V+  G    P+  DWR K    P  +Q  CG
Sbjct: 84  AAK---------YLSPPLNSDQVER----VQPTGLKAAPERMDWRAKGAVTPVENQGECG 130

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS AG                        +EGQ+ IKTG+LV  SK QLV+C    
Sbjct: 131 SCWAFSTAGN-----------------------VEGQWFIKTGQLVSLSKQQLVDCDMAA 167

Query: 235 SGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
            GC+G +   S +E     GLESE DYPY    G +  CA +K K+ +    D +    S
Sbjct: 168 EGCNGGWPSSSYLEIMDMGGLESENDYPYV---GVEQTCALNKEKL-VAKIDDAVVLGAS 223

Query: 294 ETMK-KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E      L ++GPLS LLN+  +  Y    +  + + C   DL HAVL VGY ++ ++PY
Sbjct: 224 ENEHVDYLAEHGPLSTLLNAVALQHYQSGILHPSHKDCPDDDLNHAVLTVGYDREGDMPY 283

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           W+++NSWG    ++G+F++ RG+  CGI ++A  A I+
Sbjct: 284 WIIKNSWGTDWGEKGYFRLFRGDCVCGINRMATSAVIN 321


>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 172/359 (47%), Gaps = 56/359 (15%)

Query: 55  GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 102
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 103 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 158
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R  NV  P  +Q ACGSCWAFS                           +EGQYA+K+ +
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIAN-----------------------IEGQYALKSKE 408

Query: 219 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS 277
           L+  S+ +L++C    +GC G     + E      GLE+E DYPY+  + ++  C   KS
Sbjct: 409 LLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKS 467

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
            VK+   K        E + K L K+GPLSV +N++ +  Y G         CSP  L H
Sbjct: 468 DVKVSISKAVNVSTDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDH 527

Query: 338 AVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            V +VGYG         N+PYWL++NSWGP   ++G++ + RG+ +CG+ Q+   A I+
Sbjct: 528 GVAIVGYGVHRTKYTHKNLPYWLIKNSWGPGWGEKGYYLLYRGDGSCGVNQMVSSAIIE 586


>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta]
 gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta]
          Length = 2676

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 175/342 (51%), Gaps = 56/342 (16%)

Query: 68   FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEIL 117
            F  F+     +Y +D  ++++RFE FK++  K HE          YG + F+D + EE  
Sbjct: 2371 FYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHERGTATYGVTRFADLTYEEFS 2430

Query: 118  CK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K  G K S R   ++        +    V  +   PD++DWR         DQ +CGSC
Sbjct: 2431 TKHMGMKASLRDPNQV--------QFRKAVIPNVTAPDSFDWRDHGAVTGVKDQGSCGSC 2482

Query: 177  WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
            WAFS+ G                        +EGQ+ +KTG LV  S+ +LV+C K   G
Sbjct: 2483 WAFSVTGN-----------------------IEGQWKMKTGDLVSLSEQELVDCDKLDQG 2519

Query: 237  CDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSE 294
            C+G   + +     Q  GLESE DYPY+   G   KC+++K+  ++  +G   ++   +E
Sbjct: 2520 CNGGLPDNAYRAIEQLGGLESEDDYPYE---GSDDKCSFNKTLARVQISGA--VNITSNE 2574

Query: 295  T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD----- 348
            T M K L K+GP+S+ +N++ +  Y G         C+P +L H VL+VGYG +D     
Sbjct: 2575 TDMAKWLVKHGPISIGINANAMQFYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDYPLFH 2634

Query: 349  -NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
             ++PYW+++NSWG    ++G++++ RG+  CG+ Q+A  A +
Sbjct: 2635 KHLPYWIIKNSWGTSWGEQGYYRVYRGDGTCGVNQMASSAVV 2676


>gi|67773376|gb|AAY81945.1| cysteine protease 7 [Paragonimus westermani]
          Length = 325

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 160/340 (47%), Gaps = 53/340 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 112
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
           PEE           R  ER+  DR ++  +          P + DWRKK   GP  DQ +
Sbjct: 85  PEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWRKKGAVGPVEDQGS 132

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+                          +EGQ+ +KTG+LV  SK QLV+C +
Sbjct: 133 CGSCWAFSVTAN-----------------------VEGQWFLKTGRLVSLSKQQLVDCDR 169

Query: 233 QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
              GC G +  P   Y       GLE +  YPY +    K  C  D+SK+        + 
Sbjct: 170 LDHGCSGGY--PPYTYKEIKRMGGLELQSAYPYTSW---KQACRIDRSKLVAKIDDSIVL 224

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
               E     L ++GP+S  LN+  +  Y    +  +   CSP  L HAVL VGY  +  
Sbjct: 225 ETDEEKQAAWLAEHGPMSTCLNAGPLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTEHG 284

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 285 VPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324


>gi|195111686|ref|XP_002000409.1| GI10216 [Drosophila mojavensis]
 gi|193917003|gb|EDW15870.1| GI10216 [Drosophila mojavensis]
          Length = 605

 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 170/340 (50%), Gaps = 52/340 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQ---------DGHKKHERYGTSEFSDRSPEEILC 118
           F  F +K  R+YAN  E + R   F+Q         D  +   +YG +EF+D +  E   
Sbjct: 299 FHVFQIKYKRRYANSMEHQMRLRIFRQNLRTIQELNDNEQGSAKYGITEFADMTSSEYTQ 358

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           + G  W +R+  +    +  V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 359 RAGL-W-QRSANKPTGGKPAVVPAY-----KGELPKEFDWREKNAVTQVKNQGSCGSCWA 411

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YAIKTG+L EFS+ +L++C    S C+
Sbjct: 412 FSVTGN-----------------------IEGLYAIKTGELREFSEQELLDCDSTDSACN 448

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET- 295
           G   + + +      GLE E +YPY     +K +C ++K+   +    DF+    G+ET 
Sbjct: 449 GGLMDNAYKAIKDIGGLEYESEYPYL---AKKKQCHFNKTLSHVQVA-DFVDLPKGNETA 504

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------N 349
           M++ L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D       
Sbjct: 505 MQEWLLANGPISIGLNANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDYPNFHKT 564

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 565 LPYWIVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVL 604


>gi|195152617|ref|XP_002017233.1| GL22196 [Drosophila persimilis]
 gi|194112290|gb|EDW34333.1| GL22196 [Drosophila persimilis]
          Length = 627

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 170/339 (50%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 321 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 380

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 381 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 433

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YA+KTG+L EFS+ +L++C    S C+
Sbjct: 434 FSVTGN-----------------------IEGLYAVKTGELKEFSEQELLDCDTTDSACN 470

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPY+    +K +C ++++   +          G+ET M
Sbjct: 471 GGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAM 527

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 528 QEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTL 587

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 588 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 626


>gi|198453932|ref|XP_002137768.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198132577|gb|EDY68326.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 170/339 (50%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 323 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 382

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 383 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 435

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YA+KTG+L EFS+ +L++C    S C+
Sbjct: 436 FSVTGN-----------------------IEGLYAVKTGELKEFSEQELLDCDTTDSACN 472

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPY+    +K +C ++++   +          G+ET M
Sbjct: 473 GGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAM 529

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 530 QEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTL 589

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 590 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 628


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 161/335 (48%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------GTSEFSDRSPEE 115
           F++F +K G+ Y N  E  +RF  F+++  K    +  Y         G ++F+D +  E
Sbjct: 26  FQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAE 85

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
              K       +T   IVA +        ++     VP++ DWR +NV  P  DQA CGS
Sbjct: 86  F--KAMLATQVKTKPSIVATKT------FQLADGVSVPESIDWRSRNVVTPIKDQAQCGS 137

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CW+F++ G                         EG YA+ TGKL  FS+ QLV+C    +
Sbjct: 138 CWSFAVVGS-----------------------TEGAYALSTGKLTRFSEQQLVDCTTDLN 174

Query: 236 -GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            GCDG + + +  Y    GLE E DYPY   +G    C+YD SKV              +
Sbjct: 175 YGCDGGYLDDTFPYIQTNGLELESDYPYTGYDGS---CSYDSSKVVTKVSSYVSVPANEQ 231

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + + +   GP+++ +N+D +  Y    I  +D+ C P  L H VL VGY  ++ + YWL
Sbjct: 232 ALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEWLDHGVLAVGYNSENGLDYWL 289

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 290 IKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324


>gi|67773378|gb|AAY81946.1| cysteine protease 8 [Paragonimus westermani]
          Length = 325

 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 165/340 (48%), Gaps = 53/340 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRS 112
           +N  E ++ F    G+ YAN+++ K RF  FK +  +  +         +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLT 84

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
           PEE          E  Y  +  D E+V+++ +   +  P   + DWR+K   GP  +Q +
Sbjct: 85  PEEF---------EAKYLGLRID-EQVDRVQLNDLQTAPA--SVDWREKGAVGPIENQGS 132

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+ G                        +EGQ+ +KTG LV  SK QLV+C  
Sbjct: 133 CGSCWAFSVVGN-----------------------IEGQWFLKTGYLVSLSKQQLVDCDT 169

Query: 233 QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
             +GC G +  P   Y       GLE + DYPY    G    C  D+SK+        + 
Sbjct: 170 VDNGCYGGY--PPYTYKEIKRMGGLELQSDYPY---TGWGHGCRLDRSKLFAKIDDSIVL 224

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
               E     L ++GP+S  LN+  +  Y    +  +   CSP  L HAVL VGY  +  
Sbjct: 225 EADEEKQAAWLAEHGPMSTCLNAKYLQFYQSGILHPSKAMCSPEGLNHAVLTVGYDTKHG 284

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           IPYW+++NSWG    ++G+F+I RG+  CGI+++   A I
Sbjct: 285 IPYWIIKNSWGTSWGEDGYFRIYRGDGTCGIDRLTTSAII 324


>gi|118429527|gb|ABK91811.1| cathepsin F precursor [Clonorchis sinensis]
          Length = 326

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        +EGQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDGGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R     C P  + HA
Sbjct: 218 VAYINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|390178852|ref|XP_003736743.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
 gi|388859612|gb|EIM52816.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
          Length = 477

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 170/339 (50%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F ++ GR+Y N  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 171 FHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTEYKE 230

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R  ++       V         +G  P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 231 RTGL-W-QRDEQKPTGGAPAVVPAY-----EGEFPKEFDWRQKNAVTPVKNQGSCGSCWA 283

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YA+KTG+L EFS+ +L++C    S C+
Sbjct: 284 FSVTGN-----------------------IEGLYAVKTGELKEFSEQELLDCDTTDSACN 320

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPY+    +K +C ++++   +          G+ET M
Sbjct: 321 GGLMDNAYKAIKDIGGLEYEAEYPYE---AKKQQCHFNRTLSHVQVSGFVDLPKGNETAM 377

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L  +GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 378 QEWLLTHGPISIGLNANAMQFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDYPNFHKTL 437

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 438 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 476


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 42/340 (12%)

Query: 61  NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDR 111
            E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD 
Sbjct: 163 TEMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDM 222

Query: 112 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
           SPEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q 
Sbjct: 223 SPEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQG 278

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
           +CGSCWAFS+ G                        +EG +AIKTGKL+  S+ +L++C 
Sbjct: 279 SCGSCWAFSVTGN-----------------------IEGLWAIKTGKLISLSEQELIDCD 315

Query: 232 KQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
           +   GC+G        E     GLE E  YPYK  NG    C   +S + + T  D +  
Sbjct: 316 RIDKGCNGGLPINAFREIQRMGGLEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEI 371

Query: 291 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
             +ET MK  + + GPLSV +++ L+  Y    +  +   C P  + H VL+ GYG ++ 
Sbjct: 372 PRNETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENG 431

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW ++NSWG    ++G+F++  G + CG+  +   A I
Sbjct: 432 LPYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 471


>gi|118429515|gb|ABK91805.1| cysteine proteinase 7 precursor [Clonorchis sinensis]
          Length = 326

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 165/351 (47%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        +EGQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDGGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + HA
Sbjct: 218 VAYINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis]
          Length = 537

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 170/344 (49%), Gaps = 55/344 (15%)

Query: 66  ETFKAFIVKRGRQYANDE-EIKERFEYFKQDGHKKHER---------YGTSEFSDRSPEE 115
           + F  FI     +Y ND  E+ +RFE FK++  K HE          Y  + F+D + EE
Sbjct: 229 QLFFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHERGTGVYAVTRFTDLTYEE 288

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLM---EVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
              K         Y  +  + +K  ++ M   E+ K   +P ++DWR         DQ A
Sbjct: 289 FKSK---------YLGLNPNLKKPNQIPMRQAEIPKVHQLPASFDWRPLGAVTEVKDQGA 339

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+ G                        +EGQ+ +KTGKL+  S+ +LV+C K
Sbjct: 340 CGSCWAFSVTGN-----------------------IEGQWKLKTGKLLSLSEQELVDCDK 376

Query: 233 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
              GCDG + + +     Q  GLE+E++YPY+    E  KC+++KS  K+         +
Sbjct: 377 MDDGCDGGYMDNAYRAIEQLGGLETEEEYPYE---AEDDKCSFNKSLSKVQISGAVNISS 433

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 348
               M K L   GP+S+ +N++ +  Y G         C+P ++ H VL+VGYG ++   
Sbjct: 434 NETNMAKWLVHNGPISIGINANAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKEYPL 493

Query: 349 ---NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
               +PYW+V+NSWGP   ++G++++ RG+  CG+  +A  A +
Sbjct: 494 FNKQLPYWVVKNSWGPGWGEQGYYRVFRGDGTCGVNTMASSAVV 537


>gi|67773372|gb|AAY81943.1| cysteine protease 5 [Paragonimus westermani]
          Length = 325

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 161/340 (47%), Gaps = 53/340 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 112
           +N  E ++ F    G+ YAND++ K RF  FK         Q   +   RYG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKVYANDDDQK-RFAIFKDNLVRAQKLQLKDRGTARYGVTQFSDLT 84

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
           PEE   K   +      ER+     K              P+  DWR+    GP  +Q +
Sbjct: 85  PEEFAAKYLSRPMNDQVERVRPTGLKA------------APERMDWREWGAVGPVENQGS 132

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+AG                        +EGQ+ +KTG+LV  SK QLV+C  
Sbjct: 133 CGSCWAFSVAGN-----------------------VEGQWFLKTGQLVSLSKQQLVDCDV 169

Query: 233 QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
              GC G +     +E     GLE + DYPY    G + +C  +K K  L    D L   
Sbjct: 170 MDYGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQQCYLNKEK--LLAKIDDLIVL 224

Query: 292 GS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
           G+  E     L ++GPLS  LN+  +  Y       + E CSP  L HAVL VGY  ++ 
Sbjct: 225 GAYEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYEECSPASLNHAVLTVGYDTENG 284

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW+++NSWG    + G+F++ RG+  CGI ++   A I
Sbjct: 285 VPYWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAII 324


>gi|194898683|ref|XP_001978897.1| GG11133 [Drosophila erecta]
 gi|190650600|gb|EDV47855.1| GG11133 [Drosophila erecta]
          Length = 615

 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 168/339 (49%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADLTSSEYKE 368

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R   +       V          G +P  +DWR+KN   P  +Q +CGSCWA
Sbjct: 369 RTGL-W-QRDEAKATGGSAAVVPAY-----HGELPKEFDWRQKNAVTPVKNQGSCGSCWA 421

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YA+KTG+L EFS+ +L++C    S C+
Sbjct: 422 FSVTGN-----------------------IEGLYAVKTGELKEFSEQELLDCDTTDSACN 458

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPYK    +K +C ++++   +          G+ET M
Sbjct: 459 GGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAM 515

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 516 QEWLLTKGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTL 575

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 576 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 171/339 (50%), Gaps = 42/339 (12%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH----KKHER-----YGTSEFSDRS 112
           E +  +F  FI K  R+Y++  E  +RF+ + Q+ H     +HE      YG ++FSD S
Sbjct: 129 EMLWNSFLDFIKKFKREYSSVAEQLDRFKKYMQNLHFVEKLQHEEKGTAIYGVTQFSDMS 188

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
           PEE   KT        ++R+V++  + +     +  +  +P+ +DWR K V  P  +Q +
Sbjct: 189 PEE-FQKTML--PSLWWDRVVSNGVEYDLKKFNLTFNN-LPEQFDWRTKGVVTPVKNQGS 244

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+ G                        +EG +AIKTGKL+  S+ +L++C +
Sbjct: 245 CGSCWAFSVTGN-----------------------IEGLWAIKTGKLISLSEQELIDCDR 281

Query: 233 QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
              GC+G        E     GLE E  YPYK  NG    C   +S + + T  D +   
Sbjct: 282 IDKGCNGGLPINAFREIQRMGGLEPEDQYPYKARNG---TCHLIRSAIAV-TIDDAVEIP 337

Query: 292 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
            +ET MK  + + GPLSV +++ L+  Y    +  +   C P  + H VL+ GYG ++ +
Sbjct: 338 RNETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCPPSGIDHGVLITGYGVENGL 397

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW ++NSWG    ++G+F++  G + CG+  +   A I
Sbjct: 398 PYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSSAII 436


>gi|431910221|gb|ELK13294.1| Cathepsin F [Pteropus alecto]
          Length = 458

 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 55/342 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y   EE + R   F  +  +  +         RYG ++FSD + E
Sbjct: 157 VASIFKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEE 216

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +    + ++M + +   GP P  WDWR K       DQ  CG
Sbjct: 217 EF---------RTIYLNPLLKELRSKRMPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMCG 267

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +K G L+  S+ +LV+C K  
Sbjct: 268 SCWAFSVTGN-----------------------VEGQWFLKRGDLLSLSEQELVDCDKLD 304

Query: 235 SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+      GLE+E DY Y   NG    C +   K K++         
Sbjct: 305 KACLGGL--PSNAYSAIKTLGGLETEDDYGY---NGHLQTCNFSAEKAKVYINDSVELSQ 359

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             + +   L K GP+S+ +N+  +  Y      P+R     CSP+ + HAVLLVGYG + 
Sbjct: 360 NEQKLAAWLAKNGPISIAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRS 416

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 417 DIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVVN 458


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 170/354 (48%), Gaps = 55/354 (15%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GH-------K 98
           +AI  S++   E +   F+AF ++ G+ Y N  E  +RF  F  +      H       K
Sbjct: 12  VAISASIS---EELGAKFQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGK 68

Query: 99  KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 158
              + G ++F+D S EE           +T   + A R+   +    V+    +P + DW
Sbjct: 69  VSYKKGINKFTDMSQEEF----------KTMLTLSASRKPTLETTSYVKTGVEIPSSVDW 118

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           RK+       DQ  CGSCWAFSI G                         EG YA K+GK
Sbjct: 119 RKEGRVTGVKDQGDCGSCWAFSITGS-----------------------TEGAYARKSGK 155

Query: 219 LVEFSKSQLVECAKQCS-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDK 276
           LV  S+ QL++C    S GCDG   + + +Y  + GL+SE+ Y YK  +G  K+  A   
Sbjct: 156 LVSLSEQQLIDCCTDTSAGCDGGSLDDNFKYVMKDGLQSEESYTYKGEDGACKYNVASVV 215

Query: 277 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
           +KV  +T    +     + + + +   GP+SV +++  +  Y+       D+ CSP  L 
Sbjct: 216 TKVSKYTS---IPAEDEDALLEAVATVGPVSVGMDASYLSSYDSGIYE--DQDCSPAGLN 270

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           HA+L VGYG ++   YW+++NSWG    ++G+F++ RG N CGI +   Y TID
Sbjct: 271 HAILAVGYGTENGKDYWIIKNSWGASWGEQGYFRLARGKNQCGISEDTVYPTID 324


>gi|85068704|gb|ABC69432.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE          E  Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF---------ETRYLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + HA
Sbjct: 218 VAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|85068702|gb|ABC69431.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 163/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDGGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R     C P  + HA
Sbjct: 218 VAYINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|195395906|ref|XP_002056575.1| GJ11017 [Drosophila virilis]
 gi|194143284|gb|EDW59687.1| GJ11017 [Drosophila virilis]
          Length = 599

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 166/339 (48%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F VK  R+YAN  E + R   F+Q      E         +YG +EF+D +  E   
Sbjct: 293 FHKFQVKYKRRYANSAEHQMRLRIFRQSLKTIQELNANEQGSAKYGITEFADMTSTEYAQ 352

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           + G  W +R+  +       V          G +P  +DWR+KN      +Q  CGSCWA
Sbjct: 353 RAGL-W-QRSEGKPTGGAAAVVPAYA-----GELPKEFDWRQKNAVTHVKNQGQCGSCWA 405

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YAIKTG L EFS+ +L++C  + S C+
Sbjct: 406 FSVTGN-----------------------IEGAYAIKTGDLQEFSEQELLDCDSKDSACN 442

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPY+   G+K +C ++++   +          G+ET M
Sbjct: 443 GGLMDNAYKAIKDIGGLEYESEYPYE---GKKKQCHFNRTLSHVQVSGFVDLPKGNETAM 499

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 500 QEWLLTNGPISIGINANAMQFYRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDYPNFHKTL 559

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 560 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSALL 598


>gi|358339354|dbj|GAA47434.1| cathepsin F [Clonorchis sinensis]
          Length = 603

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 185/398 (46%), Gaps = 72/398 (18%)

Query: 9   VLEKKAIMLIQAVFLLCGVASC----LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENI 64
           +LE K++ L ++ +L+  ++ C    L L  L  R T                T + EN 
Sbjct: 260 LLENKSMKLFRSRYLMMRISICYLFTLELWCLCARTT----------------TPEPENA 303

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEE 115
            + ++ F  K  + Y ND++ + RF  FK++  + H+          YG ++F D + +E
Sbjct: 304 RQLYEEFKQKYKKTYVNDDD-EYRFSVFKENLLRAHQLQTMEQGTAEYGVTQFFDLTSQE 362

Query: 116 ILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
              +  GFK+ +      + D E++      V  +    D++DWR     GP  DQ  CG
Sbjct: 363 FQIQYLGFKYED------MQDTEEMSPSTRVVMDE----DSFDWRDHGAVGPVLDQGKCG 412

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS  G                        +EGQ+ +KTG+L+  S+ QL++C    
Sbjct: 413 SCWAFSTIGN-----------------------IEGQWFLKTGELLSLSEQQLIDCDNVD 449

Query: 235 SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
            GC+G +  P   Y       GLE   DYPYK A  EK  C  D+ K+K++     +   
Sbjct: 450 EGCNGGY--PPKTYGAVIKMGGLELNSDYPYK-ALAEK--CHMDRQKLKVYINDSVVFPR 504

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
                 + L   GPLS  LN++ +  Y    +     +C P  L HAVL VGYG ++ +P
Sbjct: 505 NEHLQAEALKLMGPLSSALNANPLKFYKTGIMHLPVASCFPRALNHAVLTVGYGTENGLP 564

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YW V+NSWG    ++G+F+I RG   CGI ++   A I
Sbjct: 565 YWTVKNSWGTAFGEDGYFRIYRGGGTCGINRLVSTAAI 602



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 29/208 (13%)

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
           D +DWR+    GP  +Q  CGSCWAFS  G                        +EGQ+ 
Sbjct: 41  DNFDWRQHGAVGPVWNQGPCGSCWAFSAVGN-----------------------IEGQWF 77

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI--EYTHQAGLESEKDYPYKNANGEKFK 271
           +K+G+L+  S  Q+++C     GC+G +  P +  +     GL+ + DY YK A G   K
Sbjct: 78  LKSGELLHLSVQQVLDCDHVDHGCNGGY-PPQVYRQVNQMGGLQLDADYSYKAAVG---K 133

Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
           C  D+SK + +     +     +     L   GPL+  LN+  +  Y    +      C+
Sbjct: 134 CHTDRSKFRAYVNSSVILSQNEQFQANKLKTIGPLASTLNARTLQFYRKGIMHPTPSACN 193

Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSW 359
           P  L HAVL VGYG +  +PYW+V+NSW
Sbjct: 194 PGQLNHAVLTVGYGTEQGMPYWIVKNSW 221


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 160/335 (47%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------GTSEFSDRSPEE 115
           F++F +K G+ Y N  E  +RF  F+++  K    +  Y         G ++F+D +  E
Sbjct: 26  FQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRAE 85

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
              K       +T   IVA +        ++     VP++ DWR +NV  P  DQA CGS
Sbjct: 86  F--KAMLATQVKTKPSIVATKT------FQLADGVSVPESIDWRSRNVVTPIKDQAQCGS 137

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAF++ G                         EG YA+ TGKL  FS+ QLV+C    +
Sbjct: 138 CWAFAVVGS-----------------------TEGAYALSTGKLTRFSEQQLVDCTTDLN 174

Query: 236 -GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            GCDG + + +  Y    GLE E DYPY   +G    C+Y+ SKV              +
Sbjct: 175 YGCDGGYLDDTFPYIQTNGLELESDYPYTGYDG---YCSYESSKVVTKVSSYVSVPANEQ 231

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + + +   GP+++ +N+D +  Y    I  +D+ C P  L H VL VGY  ++   YWL
Sbjct: 232 ALLEAVGTAGPVAIAINADDLQFYFSGII--DDKYCDPEYLDHGVLAVGYDSENGRDYWL 289

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    + G+F+  RG N CG+++ A Y  I
Sbjct: 290 IKNSWGADWGESGYFRFLRGQNICGVKEDAVYPLI 324


>gi|85068698|gb|ABC69429.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDGGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICYMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R     C P  + HA
Sbjct: 218 VAYINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|116242314|gb|ABJ89814.1| cysteine protease preprotein [Clonorchis sinensis]
          Length = 326

 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + HA
Sbjct: 218 VAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|395544492|ref|XP_003774144.1| PREDICTED: cathepsin F [Sarcophilus harrisii]
          Length = 451

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 154/343 (44%), Gaps = 49/343 (14%)

Query: 60  DNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSD 110
           D+  ++  FK F+    + YAN  E + R   F          Q+  +    YG ++FSD
Sbjct: 146 DSVQLISLFKDFLTTYNKSYANATETQRRLGIFARNLELARKVQELDRGSAEYGVTKFSD 205

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE            +Y   +        +       GP P +WDWR         +Q
Sbjct: 206 LTEEEF---------RTSYLNPLLSSLPGRALRPGPATRGPAPASWDWRDHGAVTGVKNQ 256

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            ACGSCWAFS+ G                        +EGQ+ ++ G L+  S+ +LV+C
Sbjct: 257 GACGSCWAFSVTGN-----------------------VEGQWFLRRGALLALSEQELVDC 293

Query: 231 AKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                 C G    PS  YT      GLE+EKDY Y+   G K +C++   K +++     
Sbjct: 294 DTLDQACGGGL--PSNAYTAIEKLGGLETEKDYSYE---GRKERCSFSPDKARVYINSSV 348

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
                 E +   L + GP+S+ LN+  +  Y           CSP+ + HAVLLVGYG +
Sbjct: 349 DLSRDEEELATWLAENGPVSIALNAFAMQFYRRGVSHPFRPLCSPWFIDHAVLLVGYGHR 408

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             IP+W ++NSWGP   +EG++ + RG  ACG+  +A  A +D
Sbjct: 409 SGIPFWAIKNSWGPDWGEEGYYYLYRGARACGVNAMASSAIVD 451


>gi|156389068|ref|XP_001634814.1| predicted protein [Nematostella vectensis]
 gi|156221901|gb|EDO42751.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/293 (35%), Positives = 146/293 (49%), Gaps = 43/293 (14%)

Query: 102 RYGTSEFSDRSPEEILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 160
           +YG + FSD S EE   +     W +  YE   A+              G +P++ DWR 
Sbjct: 23  QYGPTIFSDLSEEEFRKQKMMPGWGKPLYEMKDAEIPL-----------GDIPESVDWRD 71

Query: 161 KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
           K V  P  +Q +CGSCWAFS  G                        +EGQYAIKTGKLV
Sbjct: 72  KGVVTPVKNQGSCGSCWAFSTTGN-----------------------IEGQYAIKTGKLV 108

Query: 221 EFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKS 277
             S+ +LV+C     GC+G    PS  Y       GLESE DYPYK A+    KC ++K+
Sbjct: 109 SLSEQELVDCDTIDKGCEGGL--PSNAYKQIEKLGGLESESDYPYKGADS---KCKFNKA 163

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
           +VK+      +     + +   L K GP+S+ +N++ +  Y G         C+P  L H
Sbjct: 164 EVKVTINSSVVISKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNH 223

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            VL+VGYG ++  PYW+++NSWGP   ++G++ I RG   CG+  +   A ID
Sbjct: 224 GVLIVGYGVKNGTPYWIIKNSWGPSWGEKGYYLIYRGGGCCGLNTMCTSAVID 276


>gi|126338866|ref|XP_001379280.1| PREDICTED: cathepsin F-like [Monodelphis domestica]
          Length = 567

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 164/373 (43%), Gaps = 53/373 (14%)

Query: 34  PSLTDRITDQVVARVDTLAIEGSLTF----DNENILETFKAFIVKRGRQYANDEEIKERF 89
           P L  +  +Q       LA   S +     D+  ++  FK F+    + YAN  E + R 
Sbjct: 232 PGLPSKARNQSSPDAGLLAEPHSSSLPRMGDSVELISLFKDFLTTYNKSYANATETQRRL 291

Query: 90  EYFKQD---GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 140
             F ++    HK  E      +YG ++FSD + EE             Y   +       
Sbjct: 292 GIFARNLELAHKLQELDQGSAQYGVTKFSDLTEEEF---------RMFYLNPLLSSLPGR 342

Query: 141 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFC 200
            +       GP P +WDWR       A +Q  CGSCWAFS+ G                 
Sbjct: 343 ALRPAPRARGPAPASWDWRDHGALTAAKNQGMCGSCWAFSVTGN---------------- 386

Query: 201 LLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH---QAGLESE 257
                  +EGQ+ ++ G L+  S+ +LV+C      C G    PS  YT      GLE+E
Sbjct: 387 -------VEGQWFLRRGALLTLSEQELVDCDTLDQACGGGL--PSNAYTAIETLGGLETE 437

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           KDY Y+   G K +C++   K + +           + +   L + GP+S+ LN+  +  
Sbjct: 438 KDYSYE---GRKERCSFSPDKARAYINSSVDLSRDEQEIAAWLAENGPVSIALNAFAMQF 494

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 377
           Y           CSP+ + HAVLLVGYG +  IP+W ++NSWGP   +EG++ + RG  A
Sbjct: 495 YRRGVSHPFRPLCSPWFIDHAVLLVGYGDRSGIPFWAIKNSWGPDWGEEGYYYLYRGARA 554

Query: 378 CGIEQIAGYATID 390
           CG+  +A  A +D
Sbjct: 555 CGMNTMASSAIVD 567


>gi|30575714|gb|AAP33049.1| cysteine proteinase 1 [Clonorchis sinensis]
          Length = 326

 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 164/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFTLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + HA
Sbjct: 218 VAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    ++G+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEKGYFRIYRGDGTCGINSIVTTAII 325


>gi|195054270|ref|XP_001994049.1| GH22731 [Drosophila grimshawi]
 gi|193895919|gb|EDV94785.1| GH22731 [Drosophila grimshawi]
          Length = 617

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 168/345 (48%), Gaps = 54/345 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 114
           I   F  F +K  RQYAN  E + R   F+Q+           +   +YG ++F+D +  
Sbjct: 307 IEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERGSAKYGITQFADMTST 366

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E     G  W +R+ ++       V          G +P  +DWR+K       +Q  CG
Sbjct: 367 EYKLHAGL-W-QRSEDKPTGGAAAVVPPYA-----GEMPKEFDWRQKKAVTHVKNQGQCG 419

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EG YAIKTG+L EFS+ +L++C    
Sbjct: 420 SCWAFSVTGN-----------------------IEGLYAIKTGELEEFSEQELLDCDSTD 456

Query: 235 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLHFN 291
           S C+G   + + +      GLE E +YPY     +K +C +++  S V+L    D     
Sbjct: 457 SACNGGLMDNAYKAIKDIGGLEYESEYPYA---AKKMQCHFNRTMSHVQLSGFVDLP--K 511

Query: 292 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 348
           G+ET M++ L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG  D  
Sbjct: 512 GNETAMQEWLLSNGPISIGLNANAMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDYP 571

Query: 349 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 572 NFHKTLPYWIVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVL 616


>gi|417401303|gb|JAA47542.1| Putative cathepsin f [Desmodus rotundus]
          Length = 459

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 158/340 (46%), Gaps = 51/340 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           ++  FK FI    R Y  +EE + R   F  +  +  E         +YG ++FSD + E
Sbjct: 158 MVSLFKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEE 217

Query: 115 EILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E           RT+      +E + +KM +    D P P  WDWR K       +Q  C
Sbjct: 218 EF----------RTFYLNPLLKEGLGKKMRLAKPVDDPAPPEWDWRNKGAVTKVKNQGMC 267

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS+ G                        +EGQ+ +K G L+  S+ +LV+C   
Sbjct: 268 GSCWAFSVTGN-----------------------VEGQWFLKQGDLLSLSEQELVDCDTL 304

Query: 234 CSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C G    PS  Y+      GLE+E DY Y   +G    C++   KVK++        
Sbjct: 305 DKACMGGL--PSNAYSAIKTLGGLETEDDYSY---HGHLQTCSFTAEKVKVYINDSVELS 359

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + +   L K GP+S+ +N+  +  Y     R     CSP+ + HAVLLVGYG + ++
Sbjct: 360 KDEQKLAAWLAKKGPISIAINAFGMQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRSDV 419

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 420 PFWAIKNSWGTDWGEEGYYYLHRGSRACGVNVMASSAVVD 459


>gi|324522685|gb|ADY48108.1| Cathepsin L, partial [Ascaris suum]
          Length = 308

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 162/341 (47%), Gaps = 55/341 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEIL 117
           +   FI +  R Y+N +E+ +RF  +K         Q   +    YG ++FSD +  E  
Sbjct: 6   SVDGFIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFR 65

Query: 118 -CKTGFKWSERTYERIVADREKVEKMLMEVEKDG----PVPDAWDWRKKNVTGPAGDQAA 172
                +KW          +  KV   +   ++ G     +P+++DWR+KN      +Q +
Sbjct: 66  KIMLPYKW----------ETPKVPNKMANFKEFGIAQNDIPESFDWREKNAVTEVKNQGS 115

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+ G                        +EG +AIKT KLV  S+ +LV+C  
Sbjct: 116 CGSCWAFSVTGN-----------------------IEGAWAIKTSKLVSLSEQELVDCDI 152

Query: 233 QCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
              GC+G    PS  Y       GLE+E DYPY   +G   KC   K  + ++       
Sbjct: 153 IDQGCNGGL--PSNAYREIIRMGGLEAESDYPY---DGRGEKCHLMKKDIAVYINDSLQL 207

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            +  E M   L   GP+S+ LN++ +  Y           CSP  L H VL+VGYG + +
Sbjct: 208 PHDEEKMAAWLVAKGPISIGLNANPLQFYRHGIAHPWRVFCSPKHLDHGVLIVGYGSETD 267

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            PYW+++NSWG    +EG+F++ RG N CGI+++A  A I+
Sbjct: 268 KPYWIIKNSWGTKWGEEGYFRLFRGKNVCGIQEMATTAIIE 308


>gi|7219908|gb|AAF40479.1| cystein protease [Clonorchis sinensis]
          Length = 326

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 163/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + H 
Sbjct: 218 VAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHG 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 325


>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens]
          Length = 884

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 168/339 (49%), Gaps = 51/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F+AFI K G+ Y + +E  +RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 579 FEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKEFKA 638

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           +      E  +E         E  L E E  D  +P  +DWR  +V  P  DQ  CGSCW
Sbjct: 639 RYLGLRPELKHEN--------EIPLPEAEIPDVSLPLKFDWRDHSVVTPVKDQGQCGSCW 690

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS+ G                        +EGQYAIK  +L+  S+ +LV+C     GC
Sbjct: 691 AFSVTGN-----------------------VEGQYAIKHNQLLSLSEQELVDCDSLDEGC 727

Query: 238 DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
           +G   E + +   +  GLE E DYPY +A  EK     +K+KV++ +  +    +  + M
Sbjct: 728 NGGDMENAYKAIERLGGLELESDYPY-DAKDEKCHFLQNKAKVQVVSAVNIT--SDEKRM 784

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNI 350
            + L K GP+SV +N++ +  Y G      +  C+P +L H VL+VGYG          +
Sbjct: 785 AQWLVKNGPISVGINANAMQFYFGGVSHPLNFLCNPKNLDHGVLIVGYGISKYPLFHKEL 844

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+++NSWGP   + G++++ RG+  CG+  +A  A +
Sbjct: 845 PYWIIKNSWGPRWGERGYYRVYRGDGTCGVNTMATSAVV 883


>gi|18138384|ref|NP_542680.1| cathepsin [Helicoverpa zea SNPV]
 gi|209401110|ref|YP_002273979.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
 gi|37077430|sp|Q8V5U0.1|CATV_NPVHZ RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|18028766|gb|AAL56202.1|AF334030_127 ORF57 [Helicoverpa zea SNPV]
 gi|209364362|dbj|BAG74621.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
          Length = 367

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 171/345 (49%), Gaps = 59/345 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 107
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 108 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           FSD++P+E+L   TGF  +   +  +  +R      +++   D  +PD +DWR  N   P
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR------IVKGAPDIRLPDYYDWRDTNKVTP 170

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAF                       +  G +E QYAI+  KL++ S+ Q
Sbjct: 171 IKDQGVCGSCWAF-----------------------VAIGNIESQYAIRHNKLIDLSEQQ 207

Query: 227 LVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 285
           L++C +   GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ +    
Sbjct: 208 LLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVKLNS 264

Query: 286 DFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
            F +       +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL+G+
Sbjct: 265 CFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLLIGW 320

Query: 345 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           G ++N+PYW+++NSWG    + GF ++ R  NACG+    G +++
Sbjct: 321 GIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGLLNEFGASSV 365


>gi|194746631|ref|XP_001955780.1| GF16067 [Drosophila ananassae]
 gi|190628817|gb|EDV44341.1| GF16067 [Drosophila ananassae]
          Length = 620

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 52/340 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F  F V+ GR+Y +  E + R   F+Q+     E         +YG +EF+D +  E   
Sbjct: 314 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTEYKE 373

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R   +       V          G +P  +DWR KN      +Q  CGSCWA
Sbjct: 374 RTGL-W-QRDEAKATGGSPAVVPAY-----SGELPKEFDWRSKNAVTGVKNQGQCGSCWA 426

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG YA+K G+L EFS+ +L++C    S C+
Sbjct: 427 FSVTGN-----------------------IEGLYALKYGELKEFSEQELLDCDTTDSACN 463

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET- 295
           G   + + +      GLE E +YPY+    +K +C ++K+   +   KDF+    G+ET 
Sbjct: 464 GGLMDNAYKAIKDIGGLEYEAEYPYE---AKKKQCHFNKTMSHVQV-KDFVDLPKGNETA 519

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------N 349
           M++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D       
Sbjct: 520 MQEWLVSNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNYHKT 579

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 580 LPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 619


>gi|2731635|gb|AAB93494.1| pre-procathepsin L [Paragonimus westermani]
          Length = 325

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 158/340 (46%), Gaps = 53/340 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 112
           +N  E ++ F    G+ YAN+++ K RF  FK         Q   +   +YG ++FSD +
Sbjct: 26  DNARELYEQFKRDYGKAYANEDDQK-RFAIFKDNLVRAQQYQTQEQGTAKYGVTQFSDLT 84

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
            EE           R  ER+  DR ++  +          P + DWR+K   GP   Q +
Sbjct: 85  NEEF---AAMYLGSRIDERV--DRVQLNDLQT-------APASVDWREKGAVGPVEHQGS 132

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+                          +EGQ+ +KTG+LV  SK QLV+C +
Sbjct: 133 CGSCWAFSVTAN-----------------------VEGQWFLKTGRLVSLSKQQLVDCDR 169

Query: 233 QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
              GC G +  P   Y       GLE +  YPY    G +  C  D+SK+        + 
Sbjct: 170 LDHGCSGGY--PPYTYKEIKRMGGLELQSAYPY---TGWEQACRLDRSKLFAKIDDSIVL 224

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
               E     L ++GP+S  LN+  +  Y    +  ++  CSP  L HAVL VGY  +  
Sbjct: 225 EKNEEKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEYACSPEGLNHAVLTVGYDTERG 284

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW VRNSWG    + G+F+I RG+  CGI+++   A I
Sbjct: 285 VPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAII 324


>gi|29567137|ref|NP_818699.1| cathepsin [Adoxophyes honmai NPV]
 gi|37076951|sp|Q80LP4.1|CATV_NPVAH RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|29467913|dbj|BAC67303.1| cathepsin [Adoxophyes honmai NPV]
          Length = 337

 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 165/360 (45%), Gaps = 45/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 102
            +  V +  IEG L FD  +    F+ FI+   +QY + +    RF+ FKQ+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKN 67

Query: 103 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD--GPVP 153
                  Y  ++FSD S  E+L K     S++    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELP 127

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR  N      DQ ACGSCWA +  G                        LE  YA
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGT-----------------------LETLYA 164

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKC 272
           IK   L+  S+ QL++C      CDG     + E    AG L  E DYPY+   G K  C
Sbjct: 165 IKHNYLINLSEQQLIDCDSANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGVC 221

Query: 273 AYDKSKVKLFTG--KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             D  K  L     K ++ F   E +KK L   GP+++ +++  I  Y+   I      C
Sbjct: 222 KIDNKKFALSVSSCKRYI-FQNEENLKKELITMGPIAMAIDAASISTYSKGIIH----FC 276

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 389
               L HAVLLVGYG +  + YW ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 277 ENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336


>gi|85068706|gb|ABC69433.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 163/351 (46%), Gaps = 54/351 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  +TG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRETGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK- 278
           S  QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK 
Sbjct: 163 SGQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSKF 217

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
           V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + HA
Sbjct: 218 VAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNHA 274

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 275 VLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|432880227|ref|XP_004073613.1| PREDICTED: cathepsin F-like [Oryzias latipes]
          Length = 473

 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 171/371 (46%), Gaps = 53/371 (14%)

Query: 32  CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
           C P      T++V    ++  +E S+      +L  FK F+VK  + Y++ EE + R + 
Sbjct: 144 CSPKAEVEETNRVAEPTNSQPVEESV-----QLLGQFKDFMVKYKKDYSSQEEAERRLQI 198

Query: 92  FKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 141
           F Q+  K  E+          YG ++FSD + EE            TY   +  +  + +
Sbjct: 199 F-QENLKTAEKLQALDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHR 248

Query: 142 -MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFC 200
            M        P PD+WDWR      P  +Q  CGSCWAFS+ G                 
Sbjct: 249 GMKPAPPAKTPAPDSWDWRDHGAVSPVKNQGMCGSCWAFSVTGN---------------- 292

Query: 201 LLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 259
                  +EGQ+ +K G L+  S+ +LV+C      C G     + E   +  GLESE D
Sbjct: 293 -------IEGQWFLKNGTLLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLESETD 345

Query: 260 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 319
           Y Y    G K KC +   KV  +             +   L + GP+SV LN+  +  Y 
Sbjct: 346 YSY---TGHKQKCDFTNRKVAAYINSSVELPKDEREIAAWLAENGPISVALNAFAMQFYK 402

Query: 320 GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
                     C+P+ + HAVLLVGYG+++ IP+W ++NSWG    ++G++ ++RG+NACG
Sbjct: 403 KGVSHPWKIFCNPWMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEQGYYYLQRGSNACG 462

Query: 380 IEQIAGYATID 390
           I ++   A I+
Sbjct: 463 INRMGSSAVIN 473


>gi|4760897|gb|AAD29130.1| cysteine proteinase 1 precursor [Clonorchis sinensis]
          Length = 328

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 166/349 (47%), Gaps = 46/349 (13%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        +EGQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
           S+ QLV+C     GC+G +   +  E     GLE   DYPY   +G    C  ++SK   
Sbjct: 163 SEQQLVDCDHLDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVA 219

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
           +  +  +     +   + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL 
Sbjct: 220 YVNESTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLT 279

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 280 VGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328


>gi|244790093|ref|NP_001156453.1| cathepsin F isoform 1 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 168/359 (46%), Gaps = 56/359 (15%)

Query: 55  GSLTFDNENI-----LET-FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER- 102
           G LT    NI     L+T F+ FI+   + Y + EE   RF  F  +  K      HE+ 
Sbjct: 261 GKLTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQG 320

Query: 103 ---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV-EKDGPVPDAWDW 158
              YG ++F+D      L K  FK   + Y  + +     + + M V  +   +P+ +DW
Sbjct: 321 SAIYGATQFAD------LTKNEFK---KKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDW 371

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R  NV  P  +Q ACGSCWAFS                           +EGQYA+K+ +
Sbjct: 372 RNHNVVTPVKNQGACGSCWAFSAIAN-----------------------IEGQYALKSKE 408

Query: 219 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS 277
           L+  S+ +L++C    +GC G     + E      GLE+E DYPY+  + ++  C   KS
Sbjct: 409 LLSLSEQELIDCDNLDNGCGGGLMTQAFEAVENLGGLETESDYPYE-GHADRKGCQLKKS 467

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
            VK+   K        E + K L K+GPLSV +N++ +  Y G         CSP  L H
Sbjct: 468 DVKVSISKAVNVSTDEEDIAKFLVKHGPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDH 527

Query: 338 AVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            V +VGYG          +P+W ++NSWG     +G++ + RG+ +CG+ Q+   A I+
Sbjct: 528 GVAIVGYGVHKYPYLNATLPFWTIKNSWGDKWGMQGYYLLYRGDGSCGVNQMVSSAIIE 586


>gi|209978824|ref|YP_002300567.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
 gi|192758806|gb|ACF05341.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
          Length = 337

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 164/360 (45%), Gaps = 45/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 102
            +  V +  IEG L FD  +    F+ FIV   +QYA+ +    RF+ F Q+    +E+ 
Sbjct: 8   TILLVASSQIEGHLKFDIHDAQHYFETFIVNYNKQYADTKTKNYRFKIFVQNLEYINEKN 67

Query: 103 -------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVP 153
                  Y  ++FSD S  E+L K     S +    + +       + ++   D    +P
Sbjct: 68  KLNDSAIYNINKFSDLSKNELLTKYTGLTSRKPSNMVKSTSNFCNVIHLDAPPDARDELP 127

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR  N      DQ ACGSCWA +  G                        LE  YA
Sbjct: 128 QNFDWRVNNKMTSVKDQGACGSCWAHAAVGT-----------------------LETLYA 164

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKC 272
           IK   L+  S+ QL++C      CDG     + E    AG L  E DYPY+   G K  C
Sbjct: 165 IKHNYLINLSEQQLIDCDSANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQ---GTKGIC 221

Query: 273 AYDKSKVKLFTG--KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             D  K  L     K ++ F   E +KK L   GP+++ +++  I  Y+   I      C
Sbjct: 222 KIDNKKFALSVSSCKRYI-FQNEENLKKELITTGPIAMAIDAASISTYSKGIIH----FC 276

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI-EQIAGYATI 389
               L HAVLLVGYG +  + YW ++NSWG    ++G+F+++R  NACG+  Q+A  ATI
Sbjct: 277 ENLGLNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATI 336


>gi|85068708|gb|ABC69434.1| cysteine protease [Clonorchis sinensis]
 gi|85068710|gb|ABC69435.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 164/349 (46%), Gaps = 46/349 (13%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        +EGQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
           S+ QLV+C     GC+G +   +  E     GLE   DYPY   +G    C  ++SK   
Sbjct: 163 SEQQLVDCDHLDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVA 219

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
           +     +     +   + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL 
Sbjct: 220 YVNDSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLT 279

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 280 VGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328


>gi|24644155|ref|NP_730901.1| CG12163, isoform A [Drosophila melanogaster]
 gi|32699625|sp|Q9VN93.2|CPR1_DROME RecName: Full=Putative cysteine proteinase CG12163; Flags:
           Precursor
 gi|23170427|gb|AAF52055.2| CG12163, isoform A [Drosophila melanogaster]
 gi|27819876|gb|AAO24986.1| LP08529p [Drosophila melanogaster]
          Length = 614

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 179/377 (47%), Gaps = 52/377 (13%)

Query: 30  CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 89
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 329

Query: 90  EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 140
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 330 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 387

Query: 141 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFC 200
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G                 
Sbjct: 388 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGN---------------- 426

Query: 201 LLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 259
                  +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +
Sbjct: 427 -------IEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 479

Query: 260 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDY 318
           YPYK    +K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  Y
Sbjct: 480 YPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFY 536

Query: 319 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIE 372
            G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ 
Sbjct: 537 RGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVY 596

Query: 373 RGNNACGIEQIAGYATI 389
           RG+N CG+ ++A  A +
Sbjct: 597 RGDNTCGVSEMATSAVL 613


>gi|24644153|ref|NP_649521.1| CG12163, isoform B [Drosophila melanogaster]
 gi|23170426|gb|AAN13266.1| CG12163, isoform B [Drosophila melanogaster]
 gi|378548248|gb|AFC17498.1| FI18603p1 [Drosophila melanogaster]
          Length = 475

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 179/377 (47%), Gaps = 52/377 (13%)

Query: 30  CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 89
           C   P +  R T  V         + S  FD  + L  F  F V+ GR+Y +  E + R 
Sbjct: 133 CRNQPVVQARHTRSVEWAEKKTHKKHSHRFDKVDHL--FYKFQVRFGRRYVSTAERQMRL 190

Query: 90  EYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE 140
             F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V 
Sbjct: 191 RIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAVV 248

Query: 141 KMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFC 200
                    G +P  +DWR+K+      +Q +CGSCWAFS+ G                 
Sbjct: 249 PAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGN---------------- 287

Query: 201 LLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKD 259
                  +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E +
Sbjct: 288 -------IEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEAE 340

Query: 260 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDY 318
           YPYK    +K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  Y
Sbjct: 341 YPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLANGPISIGINANAMQFY 397

Query: 319 NGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIE 372
            G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++ 
Sbjct: 398 RGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVY 457

Query: 373 RGNNACGIEQIAGYATI 389
           RG+N CG+ ++A  A +
Sbjct: 458 RGDNTCGVSEMATSAVL 474


>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus]
          Length = 887

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 169/345 (48%), Gaps = 59/345 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEI 116
           + F  F+V   R Y+  EE   R   F+++       +K ER    Y  + F+D SPEE 
Sbjct: 580 QLFNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPEEF 639

Query: 117 LCK-TGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACG 174
             +  G +   R+   I          L E E  D  +P  +DWR+K+V  P  DQ  CG
Sbjct: 640 RSRYLGLRPDLRSENDIP---------LREAEIPDVELPPKFDWREKSVVTPVKDQGMCG 690

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQYAIK G+L+  S+ +LV+C    
Sbjct: 691 SCWAFSVTGN-----------------------IEGQYAIKHGRLLSLSEQELVDCDDLD 727

Query: 235 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK--SKVKLFTGKDFLHFN 291
            GC+G   + +     +  GLE E DYPY+    E  KC + K  +KV+L +    ++  
Sbjct: 728 EGCNGGLPDNAYRAIEKLGGLELESDYPYE---AENEKCHFKKNLAKVQLASA---VNIT 781

Query: 292 GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-- 348
            +ET M + L + GP+S+ +N++ +  Y G         C+P +L H VL+VGYG  D  
Sbjct: 782 SNETQMAQWLVQNGPISIGINANAMQFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDYP 841

Query: 349 ----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                +PYW ++NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 842 LFHKKLPYWTIKNSWGKRWGEQGYYRVYRGDGTCGLNTLATSAVV 886


>gi|195343593|ref|XP_002038380.1| GM10654 [Drosophila sechellia]
 gi|194133401|gb|EDW54917.1| GM10654 [Drosophila sechellia]
          Length = 615

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 179/378 (47%), Gaps = 53/378 (14%)

Query: 30  CLCLPSLTDRITDQVV-ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER 88
           C   P +  R T  V  A   T        FD  + L  F  F V+ GR+Y +  E + R
Sbjct: 272 CRNQPVVQARHTRSVEWAEKKTHKKHSHRAFDKVDHL--FYKFQVRFGRRYVSTAERQMR 329

Query: 89  FEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
              F+Q+     E         +YG +EF+D +  E   +TG  W +R   +       V
Sbjct: 330 LRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL-W-QRDEAKATGGSAAV 387

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
                     G +P  +DWR+K+      +Q +CGSCWAFS+ G                
Sbjct: 388 VPAY-----HGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGN--------------- 427

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEK 258
                   +EG YA+KTG+L EFS+ +L++C    S C+G   + + +      GLE E 
Sbjct: 428 --------IEGLYAVKTGELKEFSEQELLDCDTTDSACNGGLMDNAYKAIKDIGGLEYEA 479

Query: 259 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHD 317
           +YPYK    +K +C ++++   +          G+ET M++ L   GP+S+ +N++ +  
Sbjct: 480 EYPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLTNGPISIGINANAMQF 536

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKI 371
           Y G         CS  +L H VL+VGYG  D       +PYW+V+NSWGP   ++G++++
Sbjct: 537 YRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRV 596

Query: 372 ERGNNACGIEQIAGYATI 389
            RG+N CG+ ++A  A +
Sbjct: 597 YRGDNTCGVSEMATSAVL 614


>gi|195453400|ref|XP_002073772.1| GK14287 [Drosophila willistoni]
 gi|194169857|gb|EDW84758.1| GK14287 [Drosophila willistoni]
          Length = 610

 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 49/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 118
           F  F +K  R+Y N  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 303 FHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAKYGITEFADMTSTEYKE 362

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG       ++R        +K ++     G +P  +DWR+K       +Q +CGSCWA
Sbjct: 363 RTGL------WQRTEGQPTGGQKAVVPSYPGGELPKEFDWRQKGAVSSVKNQGSCGSCWA 416

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS  G                        +EG  A+KTG+L EFS+ +L++C  + S C+
Sbjct: 417 FSTIGN-----------------------IEGLNAVKTGQLKEFSEQELLDCDTKDSACN 453

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETM 296
           G   + + +   +  GLE E +YPYK     K +C ++K+   +  TG   L  N    M
Sbjct: 454 GGLPDNAYKAIQEIGGLEYESEYPYK---ARKEQCHFNKTLAHVQVTGFVDLPKNNETAM 510

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L   GP+S+ +N++ +  Y G         C   +L H VL+VGYG  D       +
Sbjct: 511 QEWLIANGPISIGINANAMQFYRGGVSHPWKILCEKSNLDHGVLIVGYGVSDYPNFHKTL 570

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 571 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMASSAIL 609


>gi|12597541|ref|NP_075125.1| cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15426394|ref|NP_203611.1| cathepsin [Helicoverpa armigera NPV]
 gi|12483807|gb|AAG53799.1|AF271059_56 cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15384470|gb|AAK96381.1|AF303045_123 cathepsin [Helicoverpa armigera NPV]
 gi|18027090|gb|AAL55725.1|AF268612_1 cathepsin [Helicoverpa armigera NPV]
          Length = 365

 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 65/348 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 107
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 55  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 114

Query: 108 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 163
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 115 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 165

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P  DQ  CGSCWAF                       +  G +E QYAI+  KL++ S
Sbjct: 166 VTPIKDQGVCGSCWAF-----------------------VAIGNIESQYAIRHNKLIDLS 202

Query: 224 KSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + QL++C +   GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ + 
Sbjct: 203 EQQLLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVK 259

Query: 283 TGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
               F +       +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL
Sbjct: 260 LNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLL 315

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +G+G ++N+PYW+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 316 IGWGIENNVPYWIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 363


>gi|85068700|gb|ABC69430.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 161/349 (46%), Gaps = 50/349 (14%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+  
Sbjct: 75  YGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFF-EPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VK 280
           S+  LV+C     GCDG +  + +       GLE   DYPY    G    C  DKSK V 
Sbjct: 163 SEQPLVDCDYLDGGCDGGYPPQTNTAIQKMGGLELASDYPYTGVGG---ICYMDKSKFVA 219

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
              G   L  +     +K L   GPLS  LN+D +  Y G  +R     C P  + HAVL
Sbjct: 220 YINGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--RLCDPAGVNHAVL 276

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 277 TVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTARI 325


>gi|308506829|ref|XP_003115597.1| CRE-TAG-196 protein [Caenorhabditis remanei]
 gi|308256132|gb|EFP00085.1| CRE-TAG-196 protein [Caenorhabditis remanei]
          Length = 475

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 163/340 (47%), Gaps = 45/340 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 114
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 168 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNEQGTAVYGFTKFSDMTTM 227

Query: 115 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E       ++W +  Y    AD EK    + E +    +P+++DWR K       +Q  C
Sbjct: 228 EFKQTMLPYQWEQPVYPMDQADFEKEGITISEED----LPESFDWRDKGAVTQVKNQGNC 283

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG + +   KLV  S+ +LV+C   
Sbjct: 284 GSCWAFSTTGN-----------------------VEGAWFLAKNKLVSLSEQELVDCDGV 320

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE E  YPY   +G+   C   +  + ++        
Sbjct: 321 DQGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGKGETCHLVRKDIAVYINGSIELP 375

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    
Sbjct: 376 HDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRK 435

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWGP   + G+FK+ RG N CG++++A  A ++
Sbjct: 436 PYWIVKNSWGPTWGESGYFKLYRGKNVCGVQEMATSALVN 475


>gi|344310882|gb|AEN03980.1| cathepsin-like cysteine proteinase [Helicoverpa armigera NPV strain
           Australia]
          Length = 367

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 65/348 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------------------YGTSE 107
           FK F+ +  + Y + +E + R+  FK + +K + +                    +G ++
Sbjct: 57  FKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLSTSAQFGVNK 116

Query: 108 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNV 163
           FSD++P+E+L   TGF  +   +  +  +R         + K  P   +PD +DWR  N 
Sbjct: 117 FSDKTPDEVLHSNTGFFLNLSQHYTLCENR---------IVKGAPNIRLPDYYDWRDTNK 167

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P  DQ  CGSCWAF                       +  G +E QYAI+  KL++ S
Sbjct: 168 VTPIKDQGVCGSCWAF-----------------------VAIGNIESQYAIRHNKLIDLS 204

Query: 224 KSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + QL++C +   GC+G     +  E     G+E+E DYPY+   G +  C  D  K+ + 
Sbjct: 205 EQQLLDCDEVDLGCNGGLMHLAFQELLLMGGVETEADYPYQ---GSEQMCTLDNRKIAVK 261

Query: 283 TGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
               F +       +K+++Y  GP+++ +++  I +Y    + +    C  YDL HAVLL
Sbjct: 262 LNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ----CHIYDLNHAVLL 317

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +G+G ++N+PYW+++NSWG    + G+ ++ R  NACG+    G +++
Sbjct: 318 IGWGIENNVPYWIIKNSWGEDWGENGYLRVRRNVNACGLLNEFGASSV 365


>gi|71993922|ref|NP_505215.2| Protein TAG-196 [Caenorhabditis elegans]
 gi|351050011|emb|CCD64084.1| Protein TAG-196 [Caenorhabditis elegans]
          Length = 477

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 163/340 (47%), Gaps = 45/340 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 114
           I  +F  F+ +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTM 229

Query: 115 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E       ++W +  Y    A+ EK +  + E +    +P+++DWR+K       +Q  C
Sbjct: 230 EFKKIMLPYQWEQPVYPMEQANFEKHDVTINEED----LPESFDWREKGAVTQVKNQGNC 285

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG + I   KLV  S+ +LV+C   
Sbjct: 286 GSCWAFSTTGN-----------------------VEGAWFIAKNKLVSLSEQELVDCDSM 322

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        
Sbjct: 323 DQGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELP 377

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    
Sbjct: 378 HDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRK 437

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWGP   + G+FK+ RG N CG++++A  A ++
Sbjct: 438 PYWIVKNSWGPNWGEAGYFKLYRGKNVCGVQEMATSALVN 477


>gi|348528696|ref|XP_003451852.1| PREDICTED: cathepsin F-like [Oreochromis niloticus]
          Length = 475

 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 155/338 (45%), Gaps = 46/338 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +L  FK F+ K  + Y++ EE+  R   F ++     +          YG ++FSD + E
Sbjct: 173 LLGQFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSDLTEE 232

Query: 115 EILCKTGFKWSERTY-ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E            TY   +++     + M       GP PD+WDWR      P  +Q  C
Sbjct: 233 EF---------RSTYLNPLLSQWTLHQPMKPATPAKGPSPDSWDWRDHGAVSPVKNQGMC 283

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS+ G                        +EGQ+ +K G L+  S+ +LV+C   
Sbjct: 284 GSCWAFSVIGN-----------------------IEGQWFLKNGTLLSLSEQELVDCDGL 320

Query: 234 CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
              C G     + E   +  GLE+E DY Y    G K +C +   KV  +          
Sbjct: 321 DQACRGGLPSNAYEAIEKLGGLETESDYSY---TGHKQRCDFTTGKVAAYINSSVELPKD 377

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            + +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG++  IP+
Sbjct: 378 EKEIAAWLAENGPVSVALNAFAMQFYRKGISHPLKIFCNPWMIDHAVLLVGYGERKGIPF 437

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 438 WAIKNSWGEDYGEQGYYYLYRGSNACGINKMCSSAVVN 475


>gi|195497262|ref|XP_002096026.1| GE25302 [Drosophila yakuba]
 gi|194182127|gb|EDW95738.1| GE25302 [Drosophila yakuba]
          Length = 615

 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 50/339 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 118
           F  F V+ GR+Y +  E + R   F+Q+               +YG +EF+D +  E   
Sbjct: 309 FHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMGSAKYGITEFADMTSSEYKE 368

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W +R   +       V          G +P  +DWR+KN      +Q +CGSCWA
Sbjct: 369 RTGL-W-QRNEAKATGGSVAVVPAY-----HGELPKEFDWRQKNAVTQVKNQGSCGSCWA 421

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG +A+KTG L EFS+ +L++C    S C+
Sbjct: 422 FSVTGN-----------------------IEGLHAVKTGDLKEFSEQELLDCDTTDSACN 458

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + +      GLE E +YPYK    +K +C ++++   +          G+ET M
Sbjct: 459 GGLMDNAYKAIKDIGGLEYEAEYPYK---AKKNQCHFNRTLSHVQVAGFVDLPKGNETAM 515

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
           ++ L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  +       +
Sbjct: 516 QEWLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSEYPNFHKTL 575

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A +
Sbjct: 576 PYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVL 614


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 181/393 (46%), Gaps = 58/393 (14%)

Query: 16  MLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLT---FDNE---NILETFK 69
           ML +  FL C       +PS  +RI  +   R +  +++ ++    + NE    +   F 
Sbjct: 107 MLWKIKFLTCSDY----VPS--ERIIKENSDRSNMKSLDLAMNSQEWQNEEKKTLWSDFM 160

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGH---------KKHERYGTSEFSDRSPEEI--LC 118
            FI K  R+Y++ EE  +RF  + Q+ +         K    YG ++FSD + EE   + 
Sbjct: 161 TFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEKGTAIYGATKFSDMTAEEFQKIM 220

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                W       I  +       +  +      P  +DWR + V  P  DQ +CGSCWA
Sbjct: 221 LPSIWWDRVESNGITFNLNDFNLSIYNL------PSKFDWRTEGVVTPVKDQGSCGSCWA 274

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +E  +AIKTGKL+  S+ +L++C     GC+
Sbjct: 275 FSVTGN-----------------------IESLWAIKTGKLISLSEQELIDCDVIDKGCN 311

Query: 239 GCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G        E     GLE E  YPY+  NG    C   ++++ + +  D +    +ET M
Sbjct: 312 GGLPINAFREIKRMGGLEPEDQYPYEAKNG---TCHLVRAQIAV-SIDDAVEIPRNETVM 367

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           K  + + GPLSV ++++L+  Y    +  +   C P  + H VL+ GYG ++N+PYW ++
Sbjct: 368 KAWIAQRGPLSVGIDAELLSYYKSGILHPSKSRCPPSKINHGVLITGYGIENNLPYWTIK 427

Query: 357 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           NSWG    + G+F++ RG N CG+  +   A I
Sbjct: 428 NSWGEQWGENGYFQLMRGKNICGVSDLVSSAII 460


>gi|213513816|ref|NP_001133678.1| Cathepsin F precursor [Salmo salar]
 gi|209154908|gb|ACI33686.1| Cathepsin F precursor [Salmo salar]
          Length = 475

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 158/345 (45%), Gaps = 48/345 (13%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEF 108
           T D   +L  FK F+V+  R Y++ E+   R   F ++     +          YG ++F
Sbjct: 167 TEDFVELLGQFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKF 226

Query: 109 SDRSPEEILCKTGFKWSERT-YERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGP 166
           SD + EE           RT Y   +  ++K+++ M       GP P +WDWR+     P
Sbjct: 227 SDLTEEEF----------RTLYLNPLLSQQKLQRSMKPAAMPHGPAPPSWDWREHGAVSP 276

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             +Q  CGSCWAFS+ G                        +EGQ+ +KTGKLV  S+ +
Sbjct: 277 VKNQGMCGSCWAFSVTGN-----------------------IEGQWFVKTGKLVSLSEQE 313

Query: 227 LVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 285
           LV+C      C G     + E   +  G+E+E DY Y    G+K  C +   KV  +   
Sbjct: 314 LVDCDTADQACGGGLPSNAYEAIEKLGGVETETDYSY---TGKKQSCDFTTDKVTAYINS 370

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
                     +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG
Sbjct: 371 SVELSKDENEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYG 430

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           ++   P+W ++NSWG    ++G++ + RG+  CGI  +   A ++
Sbjct: 431 ERQGKPFWAIKNSWGEDYGEQGYYYLYRGSRLCGINTMCSSAIVN 475


>gi|285002340|ref|YP_003422404.1| cathepsin [Pseudaletia unipuncta granulovirus]
 gi|197343600|gb|ACH69415.1| cathepsin [Pseudaletia unipuncta granulovirus]
          Length = 338

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 175/362 (48%), Gaps = 52/362 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER- 102
           ++A    ++   +L +D  N    F  F+ K G+ YAND E K RF+ FK +    +ER 
Sbjct: 13  LLATTPIVSSMNNLQYDLSNSEVLFDEFVTKYGKVYANDAERKSRFDVFKANLAIINERN 72

Query: 103 -------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGP--- 151
                  +G + +SD S  E+L K TGFK        +  D EK  K        GP   
Sbjct: 73  AQEESATFGINFYSDLSSNELLRKQTGFK------TALHNDNEKKSKYCTRRVITGPSTR 126

Query: 152 -VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
            +P+A++WR  +       Q  CGSCWAFS                           +E 
Sbjct: 127 LLPEAFNWRDSDAVTSVKQQRDCGSCWAFSAVAN-----------------------IES 163

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEK 269
           QY IK  + V+ S+ Q+V+C    +GC+G     ++EY  ++G ++ E+DY Y    G +
Sbjct: 164 QYYIKNKQYVDLSEQQIVDCDPINNGCNGGLMSWAMEYVMRSGGVQLEEDYQYV---GNE 220

Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
             C  + + V   +G         E ++++L   GP+SV ++   + +Y  + I K+   
Sbjct: 221 GVCKNNSANVVQISGCVSYDLRNEERLRELLVSNGPISVAIDVMDVTNYQ-SGIAKH--- 276

Query: 330 CS-PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYA 387
           CS  + L HAVLLVGYG Q+N PYW+ +NSWG    + G+F++ R  N+CG + Q A  A
Sbjct: 277 CSVAHGLNHAVLLVGYGVQNNTPYWVFKNSWGSDWGENGYFRVLRDVNSCGMLNQYAATA 336

Query: 388 TI 389
            +
Sbjct: 337 IL 338


>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali]
          Length = 803

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 155/329 (47%), Gaps = 50/329 (15%)

Query: 77  RQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 127
           R Y   EE+K+RF  F+         Q   +   +YG + FSD S +E      FK    
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKE------FKKHYL 562

Query: 128 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSN 187
             ++   D  K ++ + ++  +  +P+ +DWR  N   P  +Q  CGSCWAFS+ G    
Sbjct: 563 GLKKRTPDI-KFKQEMAQI-PNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGN--- 617

Query: 188 YLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 247
                               +EGQYAIKTG LV  S+ +LV+C K   GC+G  FE +  
Sbjct: 618 --------------------IEGQYAIKTGNLVSLSEQELVDCDKYDDGCEGGLFETAYH 657

Query: 248 YTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 306
              +  GLE E DYPY   +G    C ++ S+V++         N    M K L   GP+
Sbjct: 658 AIEELGGLELESDYPY---SGRDNTCHFNSSEVRVSITSSVNISNDETDMAKWLVANGPI 714

Query: 307 SVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWG 360
           S+ +N++ +  Y G         C P  L H VL+VGYG         ++PYWL++NSW 
Sbjct: 715 SIGINANAMQFYLGGVSHPLKFLCDPKTLDHGVLIVGYGIHRTWLLHRHLPYWLIKNSWS 774

Query: 361 PIGPDEGFFKIERGNNACGIEQIAGYATI 389
                +G++ + RG+ +CG+ Q    A +
Sbjct: 775 SYWGAKGYYMLYRGDGSCGVNQWPSSAVL 803


>gi|268554660|ref|XP_002635317.1| C. briggsae CBR-TAG-196 protein [Caenorhabditis briggsae]
          Length = 477

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 162/340 (47%), Gaps = 45/340 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 114
           I  +F  FI +  ++Y+N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 170 IWNSFLDFIDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNEQGSAVYGFTKFSDMTTM 229

Query: 115 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E       ++W +  Y    AD EK    + E +    +PD++DWR         +Q  C
Sbjct: 230 EFKQTMLPYQWEQPVYPMAEADFEKEGVTISEDD----LPDSFDWRDHGAVTQVKNQGNC 285

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG + +   KLV  S+ +LV+C   
Sbjct: 286 GSCWAFSTTGN-----------------------VEGAWYLAKKKLVSLSEQELVDCDSV 322

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE E  YPY   +G+   C   +  + ++        
Sbjct: 323 DQGCNGGL--PSNAYKEIMRMGGLEPEDAYPY---DGKGETCHIVRKDIAVYINGSVELP 377

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    ++K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    
Sbjct: 378 HDEVKIQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRK 437

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWGP   + G+F++ RG N CG++++A  A ++
Sbjct: 438 PYWIVKNSWGPTWGESGYFRLYRGKNVCGVQEMATSALVN 477


>gi|223648298|gb|ACN10907.1| Cathepsin F precursor [Salmo salar]
          Length = 474

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 156/343 (45%), Gaps = 44/343 (12%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEF 108
           + D+  +L  FK F+V+  R Y++ EE   R   F          Q   +    YG ++F
Sbjct: 166 SVDSVELLGQFKEFMVRYNRTYSSQEEADRRLRVFHENLKTAEKLQSLDQGTAEYGVTKF 225

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
           SD + EE   +T +         +++ +   + M       GP P +WDWR+     P  
Sbjct: 226 SDLTEEEF--RTLY------LNPLLSQQNLQQSMKPAAMPRGPAPPSWDWREHGAVSPVK 277

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           +Q  CGSCWAFS+ G                        +EGQ+  KTGKLV  S+ +LV
Sbjct: 278 NQGMCGSCWAFSVTGN-----------------------IEGQWFAKTGKLVSLSEQELV 314

Query: 229 ECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +C      C G     + E   +  GLE+E DY Y    G+K  C +   KV  +     
Sbjct: 315 DCDTVDQACGGGLPSNAYEAIEKLGGLETETDYSY---TGKKQSCDFTTDKVIAYINSSV 371

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
                   +   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG++
Sbjct: 372 ELSTDENEIAAWLAENGPVSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGER 431

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              P+W ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 432 QGKPFWAIKNSWGEDYGEQGYYYLYRGSRLCGINKMCSSAIVN 474


>gi|357619725|gb|EHJ72184.1| hypothetical protein KGM_03271 [Danaus plexippus]
          Length = 338

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 160/320 (50%), Gaps = 47/320 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILC 118
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE I  
Sbjct: 41  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 99

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 100 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 153

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS A                         +E  +AIKTGKL++ S+ QL++C K  SGC 
Sbjct: 154 FSAAAN-----------------------VESIHAIKTGKLIDVSEQQLLDCDKYDSGCS 190

Query: 239 GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMK 297
           G     ++ Y    G  S K YPY    G   KC YD SKV++   G         + +K
Sbjct: 191 GGLPWDALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEIRLKGYKIFSKISEDQIK 247

Query: 298 KILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           + LY  GPLS+ ++   I  Y  G  + +  E C    + HAVLLVGYGK+ ++ YW+V+
Sbjct: 248 EHLYNIGPLSIAIDVSPIKPYVGGIVMEECHEVC---QVNHAVLLVGYGKEYSVEYWIVK 304

Query: 357 NSWGPIGPDEGFFKIERGNN 376
           NSWGP   + G+F++ERG N
Sbjct: 305 NSWGPNWGENGYFRMERGVN 324


>gi|85068712|gb|ABC69436.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 164/349 (46%), Gaps = 46/349 (13%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHER 102
           A+  +   + +N    ++ F +K  + Y+ND++ + RFE FK         Q+  +   +
Sbjct: 16  ALARTTQVEPDNARALYEEFKLKYKKTYSNDDD-ELRFEIFKDNLLRAKRLQEMEQGTAQ 74

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           YG ++FSD + EE   KT +         +  D    E + M+ EK       +DWR+  
Sbjct: 75  YGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDPSPEEDVTMDNEK-------FDWREHG 125

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ  CGSCWAFS+ G                        +EGQ+  KTG L+  
Sbjct: 126 AVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLAL 162

Query: 223 SKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
           S+ QLV+C     GC+G +   +  E     GLE   DYPY   +G    C  ++SK   
Sbjct: 163 SEQQLVDCDHLEKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---ICYMNQSKFVA 219

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
           +     +     +   + L + GPLS  LN+ L+  Y G  I      C+P+ L HAVL 
Sbjct: 220 YVNDSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLT 279

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           VGYG +  IPYW+V+NS G    ++G+F+I RG   CGI  +   A ID
Sbjct: 280 VGYGTEFGIPYWIVKNSLGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 328


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 150/336 (44%), Gaps = 52/336 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE----------RYGTSEFSDRSPEE 115
           F+AF +K G+ Y N  E   RF  FK +    ++H           + G + F+D + EE
Sbjct: 25  FQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEE 84

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                      R +  + + ++        V     VPD+ DWR K       DQ  CGS
Sbjct: 85  F----------RAFLTLSSSKKPHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGS 134

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC- 234
           CWAFS+ G                         E  Y  K GKLV  S+ QLV+C+    
Sbjct: 135 CWAFSVTGS-----------------------TEAAYYRKAGKLVSLSEQQLVDCSTDIN 171

Query: 235 SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 293
           +GC+G + + +  Y    GLE+E  YPYK  +G    C Y  SKV    +G   L     
Sbjct: 172 AGCNGGYLDETFTYVKSKGLEAESTYPYKGTDGS---CKYSASKVVTKVSGHKSLKSEDE 228

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
             +   +   GP+SV +++  +  Y        D+ CSP +L H VL+VGYG  +   YW
Sbjct: 229 NALLDAVGNVGPVSVAIDATYLSSYESGIYE--DDWCSPSELNHGVLVVGYGTSNGKKYW 286

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +V+NSWG    + G+F++ RG N CG+ +   Y  I
Sbjct: 287 IVKNSWGGSFGESGYFRLLRGKNECGVAEDTVYPII 322


>gi|146335582|gb|ABQ23400.1| cathepsin L isotype 3 [Trypanoplasma borreli]
          Length = 442

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 47/337 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F+ F     R YA+ +E ++RFE F  +  K  E         +G +EF+D S EE   +
Sbjct: 25  FRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                + R Y  ++A   K  K   E E +  V    DWR K    P  +Q +CGSCW+F
Sbjct: 85  HN---AARHYAAVMARPPKNTKTFTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSF 141

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+AI TG+LV  S+ +LV C     GC G
Sbjct: 142 STTGN-----------------------IEGQHAIATGQLVSLSEQELVSCDTVDDGCSG 178

Query: 240 CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN----G 292
              + +  +    H   + +E  YPY + NG    C ++ +   +  G     F+     
Sbjct: 179 GLMDNAFGWLLSAHNGQITTEASYPYVSGNGIVPACTFNSNSNPV--GATITSFHDIPKT 236

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
              M   ++KYGPLS+ +++     Y G  +      CS   + H VL+VG+    + PY
Sbjct: 237 ERDMAAFVFKYGPLSIGVDASSWQSYIGGILSH----CSDVQIDHGVLIVGFDDTASTPY 292

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           W+++NSW  +  ++G+ ++ +G+N CG+      + +
Sbjct: 293 WIIKNSWSSMWGEQGYIRVAKGSNQCGLTSFPSSSVV 329


>gi|223049408|gb|ACM80348.1| cysteine proteinase [Solanum lycopersicum]
          Length = 368

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 175/393 (44%), Gaps = 71/393 (18%)

Query: 22  FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQ 78
           F L  V S L   S    +  ++    D + I   +  ++ ++L     F  F  + G+ 
Sbjct: 5   FSLVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVVGDEDHHMLNAEHHFTLFKKRFGKT 64

Query: 79  YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 130
           YA+DEE   RF  FK +  +  +H++      +G ++FSD +P+E   K  F    R   
Sbjct: 65  YASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEFSQK--FLGVNRRL- 121

Query: 131 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLL 190
           R  +D  K   +  E      +P  +DWR+     P  +Q +CGSCW+FS  G       
Sbjct: 122 RFPSDANKAPILPTE-----DLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGA------ 170

Query: 191 QYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 241
                            LEG   + TGKLV  S+ QLV+C  +C         SGC G  
Sbjct: 171 -----------------LEGANFLATGKLVSLSEQQLVDCDHECDPEEKDSCDSGCSGGL 213

Query: 242 FEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 300
              + EYT +AG L  E+DYPY     +K  C +D +KV        +     E +   L
Sbjct: 214 MNSAFEYTLKAGGLMREEDYPYTGT--DKATCKFDNTKVAAKVANFSVVSLDEEQIAANL 271

Query: 301 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG------KQDNI 350
            K GPL+V +N+  +  Y G           PY     L H VLLVGYG      +    
Sbjct: 272 VKNGPLAVAINAVFMQTYVGG-------VSCPYICSKQLDHGVLLVGYGTGFSPIRMKEK 324

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 325 PYWIIKNSWGEKWGESGYYKIRRGRNVCGVDSM 357


>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium
            castaneum]
          Length = 1726

 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 45/296 (15%)

Query: 103  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1466 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1517

Query: 163  VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
            V     +Q  CGSCWAFS+ G                        +EGQYA++ GKL+EF
Sbjct: 1518 VVTEVKNQEQCGSCWAFSVTGN-----------------------VEGQYALRHGKLLEF 1554

Query: 223  SKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            S+ +LV+C     GC+G   + +     +  GLE+E+DYPY   + E  KC ++++  ++
Sbjct: 1555 SEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARV 1611

Query: 282  -FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              TG   L+ + +ET M K L   GP+S+ +N++ +  Y G         CSP +L H V
Sbjct: 1612 QVTGA--LNISHNETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGV 1669

Query: 340  LLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            L+VGYG  +      ++PYW+V+NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1670 LIVGYGVHNYPLFKKSLPYWIVKNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1725


>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum]
          Length = 1761

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 45/296 (15%)

Query: 103  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
            YG + F+D + +E     G +   R        + K+  + +        P  +DWRKKN
Sbjct: 1501 YGITRFADMTQKEFSRSLGLRTDLRNENETPFAQAKIPNIEL--------PKEFDWRKKN 1552

Query: 163  VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
            V     +Q  CGSCWAFS+ G                        +EGQYA++ GKL+EF
Sbjct: 1553 VVTEVKNQEQCGSCWAFSVTGN-----------------------VEGQYALRHGKLLEF 1589

Query: 223  SKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            S+ +LV+C     GC+G   + +     +  GLE+E+DYPY   + E  KC ++++  ++
Sbjct: 1590 SEQELVDCDTDDQGCNGGLMDTAYRSIEKIGGLETEQDYPY---DAEDEKCHFNRTLARV 1646

Query: 282  -FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              TG   L+ + +ET M K L   GP+S+ +N++ +  Y G         CSP +L H V
Sbjct: 1647 QVTGA--LNISHNETDMAKWLVANGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGV 1704

Query: 340  LLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            L+VGYG  +      ++PYW+V+NSWG    ++G++++ RG+  CG+ Q    A +
Sbjct: 1705 LIVGYGVHNYPLFKKSLPYWIVKNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIV 1760


>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator]
          Length = 1032

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 163/339 (48%), Gaps = 51/339 (15%)

Query: 68   FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEILC 118
            F+ F+    R YA +EE   R   F+++       +K+E+    YG ++F+D S EE   
Sbjct: 727  FENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQGTGQYGVNQFADVSTEEFHA 786

Query: 119  -KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
               G +   RT   I   + ++         D  +P+++DWR+K    P  +Q  CGSCW
Sbjct: 787  FYLGLRPDLRTENNIPLRQAEI--------PDIELPNSFDWRQKGAVTPVKNQGMCGSCW 838

Query: 178  AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
            AFS+ G                        +EGQYAIK  KL+  S+ +LV+C     GC
Sbjct: 839  AFSVTGN-----------------------VEGQYAIKHNKLLSLSEQELVDCDDLDEGC 875

Query: 238  DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
            +G   + +     +  GLE E DYPY+    E  +C + K+  K+  G      +    +
Sbjct: 876  NGGLPDNAYRAIEKLGGLELESDYPYE---AENERCHFKKNMAKVQVGSAVNITSNETQI 932

Query: 297  KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
             + L   GP+S+ +N++ +  Y G         C+P +L H VL+VGYG  +       +
Sbjct: 933  AQWLVANGPISIGINANAMQFYMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNYPLFHKKL 992

Query: 351  PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            PYW+V+NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 993  PYWIVKNSWGDRWGEQGYYRVYRGDGTCGLNTMASSAVV 1031


>gi|168018894|ref|XP_001761980.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686697|gb|EDQ73084.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 188/413 (45%), Gaps = 77/413 (18%)

Query: 10  LEKKAIMLIQAVFL-LCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 68
           +E + ++L+  V L   G A+ L        +TD  ++         +L        + F
Sbjct: 1   MESRGLLLVGIVVLGFAGFAASLPTGDTIREVTDDALSNGSVEQFAHALI----GAEKRF 56

Query: 69  KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK- 119
           ++F+   G+ Y + EE + RF  FK +  K  KH+       +G + FSD + EE   K 
Sbjct: 57  ESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDPTASHGVTMFSDLTEEEFTSKY 116

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
            G K        +++   +   +  E      +P  +DWR+K   GP  DQ  CGSCWAF
Sbjct: 117 LGLK-----RPSVLSSAPQAPPLPTE-----DLPPNFDWREKGAVGPVKDQGGCGSCWAF 166

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        +EG + + +GKLV  S+ QLV+C  QC     
Sbjct: 167 STTGA-----------------------VEGAHFLNSGKLVSLSEQQLVDCDHQCDREEA 203

Query: 235 ----SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               +GC+G F   + +Y   A GLE E DYPY+  +G   KC +D +KV +    +F +
Sbjct: 204 DACDAGCNGGFMTNAYQYVEAAGGLELESDYPYEGRDG---KCKFDSNKVAVKV-SNFTN 259

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG 345
               E  +   L K GPL++ +N++ +  Y      PI      C+  +L H VLLVGY 
Sbjct: 260 IPVDEDQVAAYLIKSGPLAIGINAEFMQTYIAGVSCPI-----FCNKRNLDHGVLLVGYA 314

Query: 346 KQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           ++          PYW+++NSWGP   D G++KI RG+  CG+  +    +  V
Sbjct: 315 ERGFAPARLAYKPYWIIKNSWGPNWGDNGYYKICRGHGECGLNTMVSAVSASV 367


>gi|390994427|gb|AFM37363.1| cathepsin F1 [Dictyocaulus viviparus]
          Length = 459

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 54/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 118
           F  F+ +  + Y +  +  +RF  FK         Q+  +    YG ++FSD +PEE   
Sbjct: 157 FVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPEEF-- 214

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-----PVPDAWDWRKKNVTGPAGDQAAC 173
                  ++ Y   + D   V   ++++  +G      +P+++DWR         +Q  C
Sbjct: 215 -------KKIYLPYIWDEPIVPNRMVDLTAEGVHLNETLPESFDWRDHGAVTDVKNQGFC 267

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   KLV  S+ +LV+C K 
Sbjct: 268 GSCWAFSTTGN-----------------------IEGQWFLAKKKLVSLSEQELVDCDKV 304

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE+E  YPY   +G   +C  ++++  ++        
Sbjct: 305 DDGCEGGL--PSQAYKEIMRMGGLETESAYPY---DGRGEECHINRTEFAVYINDSVELP 359

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +  E+MK  L K GP+S+ +N++ +  Y           C PY L H VLLVGYG + N 
Sbjct: 360 HDEESMKAWLVKKGPISIGINANPLQFYRHGISHPWKFFCEPYMLNHGVLLVGYGSEKNK 419

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+++NSWGP   + G++++ RG N CG+ ++   A +
Sbjct: 420 PYWIIKNSWGPKWGENGYYRLYRGKNVCGVHEMPTSAVV 458


>gi|347968729|ref|XP_003436276.1| AGAP002879-PC [Anopheles gambiae str. PEST]
 gi|333467870|gb|EGK96737.1| AGAP002879-PC [Anopheles gambiae str. PEST]
          Length = 953

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 53/375 (14%)

Query: 34  PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
           P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 612 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 666

Query: 92  FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 142
           F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 667 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 726

Query: 143 LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLL 202
           +  V   G +P ++DWR         +Q +CGSCWAFS  G                   
Sbjct: 727 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGN------------------ 765

Query: 203 IFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYP 261
                +EG + IKT KL  +S+ +L++C K  +GC G + + + +   Q  GLE E DYP
Sbjct: 766 -----VEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYP 820

Query: 262 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG 320
           Y+ A  +K  C +++S +     K  +    +ET + K L K GP+++ LN++ +  Y G
Sbjct: 821 YE-AKAQK-SCHFNRS-LSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRG 877

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERG 374
                    C+   + H VL+VGYG ++       +PYW+++NSWGP   ++G+++I RG
Sbjct: 878 GISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRG 937

Query: 375 NNACGIEQIAGYATI 389
           +N+CG+ ++A  A +
Sbjct: 938 DNSCGVSEMASSAIL 952


>gi|432091081|gb|ELK24293.1| Cathepsin F, partial [Myotis davidii]
          Length = 410

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK FI    R Y  +EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 113 FKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 170

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +   E  +KM +      P P  WDWRKK       +Q  CGSCWA
Sbjct: 171 -------RTMYLNPLLKEELGKKMRLVKFVGDPAPPEWDWRKKGAVTKVKNQGMCGSCWA 223

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +K G L+  S+ +LV+C K    C 
Sbjct: 224 FSVTGN-----------------------VEGQWFLKRGDLLSLSEQELVDCDKVDKACM 260

Query: 239 GCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+      GLE+E DY Y   +G    C++   K K++        +  + 
Sbjct: 261 GGL--PSNAYSAIKTLGGLETEDDYSY---SGHLQTCSFSAQKAKVYINDSVELSHNEQE 315

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L K GP+S+ +N+  +  Y     R     CS + + HAVLLVGYG + ++P+W +
Sbjct: 316 LAAWLAKNGPISIAINAFGMQFYRHGISRPLRPLCSRWFIDHAVLLVGYGNRSDVPFWAI 375

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 376 KNSWGTDWGEEGYYYLHRGSGACGVNVMASSAVVN 410


>gi|403183546|gb|EJY58173.1| AAEL017153-PA [Aedes aegypti]
          Length = 1165

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 175/353 (49%), Gaps = 49/353 (13%)

Query: 54   EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYG 104
            EG  +   ++    F+ F +K  R+Y +  E + RF  FK +  K     K+E    +YG
Sbjct: 844  EGHYSKGEDHARHLFEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYG 903

Query: 105  TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
             + F+D +  E   +TG             DR  V     E++++  +P+++DWR+    
Sbjct: 904  ITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWRELGAV 957

Query: 165  GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
             P  +Q  CGSCWAFS+ G                        +EG + IKT  L E+S+
Sbjct: 958  SPVKNQGNCGSCWAFSVVGN-----------------------IEGLHQIKTKVLEEYSE 994

Query: 225  SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
             +L++C    S C G + + + +   +  GLE E +YPY  A  +K  C ++ ++V +  
Sbjct: 995  QELLDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVHVRV 1052

Query: 284  GKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
             K  +    +ET M + L   GP+S+ LN++ +  Y G         CS  +L H VL+V
Sbjct: 1053 -KGAVDLPKNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIV 1111

Query: 343  GYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            GYG ++       +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 1112 GYGVKEYPMFNKTMPYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 1164


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 58/352 (16%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++A +  +A+  SL    EN+  TF++F +K  + Y+N  E  +R   F ++     E  
Sbjct: 5   ILASLLIVAVGASL----ENVGSTFQSFKLKHSKSYSNQVEEAKRLAIFTENLRDIEEHN 60

Query: 104 G------------TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
                         ++F+D + +E         S+ T   +   R  ++           
Sbjct: 61  ALYAAGLVSYNKSVNQFTDLTIDEFKAYLTLH-SKPTLNTVPYVRTGLQ----------- 108

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VP   DWR +       DQ  CGSCWAFS+ G                         EG 
Sbjct: 109 VPTTLDWRSQGYVTGVKDQGDCGSCWAFSVVGS-----------------------TEGA 145

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF 270
           Y   TGKLV  S+ QL++C    + GCDG + E +  Y  Q GL SE  YPY   +G   
Sbjct: 146 YYKSTGKLVSLSEQQLIDCTTNVNDGCDGGYLEETFPYVQQTGLVSESSYPYTGRDG--- 202

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            C   +S V     K ++   G   + + +   GP+SV +++  I+ Y       +   C
Sbjct: 203 NCRISESDVVTKVSK-YVLLGGEADLLEAVGSVGPVSVAMDATYIYSYASGVYESS--LC 259

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
           S Y L H VL+VGYG QD   YWL++NSWG    ++G+ K+ RG N CGI +
Sbjct: 260 SLYSLNHGVLVVGYGTQDGKDYWLIKNSWGNTWGEQGYLKLLRGTNECGIAE 311


>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile
           rotundata]
          Length = 884

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 162/339 (47%), Gaps = 51/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER----YGTSEFSDRSPEEILC 118
           F+ F+    + Y + +E  +R++ F+++       +K E+    YG + F+D +PEE   
Sbjct: 579 FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQGTAVYGVTMFADLTPEEFKT 638

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           K  G K +         ++E    +   V  D  +P  +DWR+ N   P  DQ  CGSCW
Sbjct: 639 KYLGLKTN--------LNQENDIPLQEAVIPDIDLPPKFDWREYNAVTPVKDQGQCGSCW 690

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS  G                        +EGQYAIK  KL+  S+ +LV+C     GC
Sbjct: 691 AFSAIGN-----------------------IEGQYAIKHKKLLSLSEQELVDCDNLDDGC 727

Query: 238 DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
            G +   + +   +  GLE E DYPY   N    KC + K+K K+         N  + M
Sbjct: 728 GGGYMINAYKTVEKLGGLELETDYPYDARNE---KCHFLKNKAKVQVASALNITNDEKKM 784

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNI 350
            + L K GP+SV +N++ +  Y G         C P +L H VL+VGY        +  +
Sbjct: 785 AQWLVKNGPISVGINANAMQFYFGGVSHPFKFLCDPANLDHGVLIVGYATSTYPLFKKKL 844

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+++NSWGP   ++G++++ RG+  CG+  +A  A +
Sbjct: 845 PYWIIKNSWGPKWGEQGYYRVYRGDGTCGVNAMASSAIV 883


>gi|186688051|gb|ACC86111.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 49/370 (13%)

Query: 32  CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 92  FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 141
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
           M       GP P +WDWR         +Q  CGSCWAFS+ G                  
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGN----------------- 294

Query: 202 LIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 260
                 +EGQ+ +K G LV  S+ +LV+C      C+G     + E   +  GLE+E DY
Sbjct: 295 ------IEGQWFLKNGTLVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDY 348

Query: 261 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 320
            Y    G+K  C +   KV  +           + +   L + GP+SV LN+  +  Y  
Sbjct: 349 SYI---GKKQSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRK 405

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
                    C+P+ + HAVL+VGYG++  IP+W ++NSWG    ++G++ + RG+NACGI
Sbjct: 406 GVSHPLKIFCNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGI 465

Query: 381 EQIAGYATID 390
            ++   A ++
Sbjct: 466 NKMCSSAVVN 475


>gi|124484383|dbj|BAF46302.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 369

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 158/358 (44%), Gaps = 69/358 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   R   FK +    K+H+       +G ++FSD +P+
Sbjct: 42  NADHHFTLFKSKYGKSYATQEEHDYRLSVFKANLRRAKRHQLLDPSAVHGVTKFSDLTPK 101

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLM-------EVEKDGPVPDAWDWRKKNVTGPA 167
           E           RT+  I        K+ +       E+     +P  +DWR        
Sbjct: 102 EF---------RRTFLGIRKSSSGKRKLKLPADAHAAEILPTSDLPSDFDWRDYGAVTGV 152

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ +CGSCW+FS  G                        LEG   + TG+LV  S+ QL
Sbjct: 153 KDQGSCGSCWSFSTTG-----------------------ALEGANFLATGELVSLSEQQL 189

Query: 228 VECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKS 277
           V+C   C         SGC+G     + EY  Q+G LE EKDYPY   +G    C +DKS
Sbjct: 190 VDCDHLCDPEEAGACDSGCNGGLMTTAYEYVLQSGGLEKEKDYPYTGKDG---TCKFDKS 246

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
           K+        +     + +   L K+GPLSV +N+  +  Y G         CS  +L H
Sbjct: 247 KIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINAVFMQTYIGGV--SCPYICSKRNLDH 304

Query: 338 AVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            VLLVGYG          + PYW+V+NSWG    +EG++KI RGNN CGI+ +    T
Sbjct: 305 GVLLVGYGAAGYAPIRFKDKPYWIVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVT 362


>gi|224555777|gb|ACN56478.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 167/370 (45%), Gaps = 49/370 (13%)

Query: 32  CLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
           C P +  ++ +     V+ L+I   L  ++  +L  FK F+VK  + Y++ +E   R   
Sbjct: 144 CQPKVEFQVKE--TNEVEDLSINPPLE-ESVELLGQFKEFMVKYNKVYSSQDEADRRLSI 200

Query: 92  FK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK- 141
           F          Q   +    YG ++FSD + EE            TY   +  +  + + 
Sbjct: 201 FHENLKTAEKLQSLDQGSAEYGVTKFSDLTEEEF---------RSTYLNPLLSQWTLHRP 251

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
           M       GP P +WDWR         +Q  CGSCWAFS+ G                  
Sbjct: 252 MKPASPAKGPAPASWDWRDHGAVSSVKNQGMCGSCWAFSVTGN----------------- 294

Query: 202 LIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDY 260
                 +EGQ+ +K G LV  S+ +LV+C      C+G     + E   +  GLE+E DY
Sbjct: 295 ------IEGQWFLKNGTLVSLSEQELVDCDGLDQACNGGLPSNAYEAIEKLGGLETETDY 348

Query: 261 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 320
            Y    G+K  C +   KV  +           + +   L + GP+SV LN+  +  Y  
Sbjct: 349 SYI---GKKQSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGPVSVALNAFAMQFYRK 405

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
                    C+P+ + HAVL+VGYG++  IP+W ++NSWG    ++G++ + RG+NACGI
Sbjct: 406 GVSHPLKIFCNPWMIDHAVLMVGYGERKGIPFWAIKNSWGEDYGEQGYYNLYRGSNACGI 465

Query: 381 EQIAGYATID 390
            ++   A ++
Sbjct: 466 NKMCSSAVVN 475


>gi|633096|dbj|BAA04664.1| prepro NTP [Paragonimus westermani]
          Length = 245

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 124/239 (51%), Gaps = 27/239 (11%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P+  DWR K    P  +Q  CGSCWAFS AG                        +EGQ
Sbjct: 31  APERMDWRAKGAVTPVENQGECGSCWAFSTAGN-----------------------VEGQ 67

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKF 270
           + IKTG+LV  SK QLV+C     GC+G +   S +E  +  GLESE DYPY    G + 
Sbjct: 68  WFIKTGQLVSLSKQQLVDCDMAAEGCNGGWPASSYLEIMYMGGLESESDYPYV---GVEQ 124

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            CA +K K+        +     E     L ++GPLS LLN+  +  Y    ++   E C
Sbjct: 125 TCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAVALQYYQSGVLKPTFEEC 184

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
              +L HAVL VGY K+ ++PYW+++NSWG    ++G+F++ RG+  CGI ++A  A I
Sbjct: 185 PDTELNHAVLTVGYDKEGDMPYWIIKNSWGTDWGEKGYFRLFRGDCTCGINRMATSAII 243


>gi|341878608|gb|EGT34543.1| hypothetical protein CAEBREN_26318 [Caenorhabditis brenneri]
          Length = 478

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 163/340 (47%), Gaps = 46/340 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 114
           +  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 VWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 115 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG + +   KLV  S+ +LV+C   
Sbjct: 287 GSCWAFSTTGN-----------------------IEGAWFLAKKKLVSLSEQELVDCDSV 323

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        
Sbjct: 324 DQGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELP 378

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    
Sbjct: 379 HDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRK 438

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWGP   + G+FK+ RG N CG++++A  + ++
Sbjct: 439 PYWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATSSLVN 478


>gi|347968733|ref|XP_312034.5| AGAP002879-PA [Anopheles gambiae str. PEST]
 gi|333467868|gb|EAA08025.5| AGAP002879-PA [Anopheles gambiae str. PEST]
          Length = 1810

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 53/375 (14%)

Query: 34   PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1469 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1523

Query: 92   FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 142
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1524 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1583

Query: 143  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLL 202
            +  V   G +P ++DWR         +Q +CGSCWAFS  G                   
Sbjct: 1584 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGN------------------ 1622

Query: 203  IFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYP 261
                 +EG + IKT KL  +S+ +L++C K  +GC G + + + +   Q  GLE E DYP
Sbjct: 1623 -----VEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYP 1677

Query: 262  YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG 320
            Y+ A  +K  C +++S +     K  +    +ET + K L K GP+++ LN++ +  Y G
Sbjct: 1678 YE-AKAQK-SCHFNRS-LSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRG 1734

Query: 321  TPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERG 374
                     C+   + H VL+VGYG ++       +PYW+++NSWGP   ++G+++I RG
Sbjct: 1735 GISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRG 1794

Query: 375  NNACGIEQIAGYATI 389
            +N+CG+ ++A  A +
Sbjct: 1795 DNSCGVSEMASSAIL 1809


>gi|19195|emb|CAA78403.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 361

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 181/399 (45%), Gaps = 79/399 (19%)

Query: 21  VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 80
           +FLL  +A  L   ++     D ++ +V    + G+      N    F  F  K G+ YA
Sbjct: 2   LFLLSFLAFALFSSAIAFSDDDPLIRQV----VSGNDDNHMLNAEHHFSLFKAKFGKIYA 57

Query: 81  NDEEIKERFEYFKQDGH--KKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERI 132
           + EE   R + FK + H  K+H+       +G ++FSD +P E           RTY  +
Sbjct: 58  SQEEHDHRLKVFKANLHRAKRHQLLDPSAEHGITQFSDLTPSEF---------RRTYLGL 108

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
              R  +      +     +P  +DWR+K       +Q +CGSCW+FS  G         
Sbjct: 109 NKPRPNLNAEKAPILPTKDLPSDFDWREKGAVTDVKNQGSCGSCWSFSTTG--------- 159

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFE 243
                          +EG + + TG+LV  S+ QLV+C  +C         +GC+G    
Sbjct: 160 --------------AVEGAHFLATGELVSLSEQQLVDCDHECDPVEKNDCDAGCNGGLMT 205

Query: 244 PSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 302
            + EYT +AG L+ EKDYPY   NG   KC +DKS++        +     + +   L K
Sbjct: 206 TAFEYTLKAGGLQLEKDYPYTGRNG---KCHFDKSRIAASVSNFSVVGLDEDQIAANLLK 262

Query: 303 YGPLSVLLNSDLIHDYN---GTPI---RKNDETCSPYDLGHAVLLVGYGKQ-------DN 349
           +GPL+V +N+  +  Y      P+   ++ D         H VLLVGYG +        N
Sbjct: 263 HGPLAVGINAAWMQTYVRGVSCPLICFKRQD---------HGVLLVGYGSEGFAPIRLKN 313

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            PYW+++NSWG    + G++KI RG++ CG++ +    T
Sbjct: 314 KPYWIIKNSWGKTWGEHGYYKICRGHHICGVDAMVSTVT 352


>gi|347968731|ref|XP_003436277.1| AGAP002879-PB [Anopheles gambiae str. PEST]
 gi|333467869|gb|EGK96736.1| AGAP002879-PB [Anopheles gambiae str. PEST]
          Length = 1834

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 183/375 (48%), Gaps = 53/375 (14%)

Query: 34   PSLTDRITDQVVAR--VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEY 91
            P+ T   T   V R  V +L I+     D+ ++   F  F     RQYA+  E + RF  
Sbjct: 1493 PAPTPVTTAPAVKRRSVRSLKID-----DDAHVRRMFDKFRHHHRRQYASSMEHEMRFNI 1547

Query: 92   FKQDGHK-----KHER----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 142
            F+ +  K     K ER    YG ++F+D +  E    TG    +      V +R   E+ 
Sbjct: 1548 FRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYRAHTGLVVPKHDRANHVGNRVASEED 1607

Query: 143  LMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLL 202
            +  V   G +P ++DWR         +Q +CGSCWAFS  G                   
Sbjct: 1608 VAGV---GDLPRSFDWRDHGAVTEVKNQGSCGSCWAFSAVGN------------------ 1646

Query: 203  IFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYP 261
                 +EG + IKT KL  +S+ +L++C K  +GC G + + + +   Q  GLE E DYP
Sbjct: 1647 -----VEGLHQIKTKKLESYSEQELIDCDKVDNGCGGGYMDDAFKAIEQLGGLELENDYP 1701

Query: 262  YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG 320
            Y+ A  +K  C +++S +     K  +    +ET + K L K GP+++ LN++ +  Y G
Sbjct: 1702 YE-AKAQK-SCHFNRS-LSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGLNANAMQFYRG 1758

Query: 321  TPIRKNDETCSPYDLGHAVLLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERG 374
                     C+   + H VL+VGYG ++       +PYW+++NSWGP   ++G+++I RG
Sbjct: 1759 GISHPWHPLCNHKSIDHGVLIVGYGIKEYPMFNKTLPYWIIKNSWGPRWGEQGYYRIYRG 1818

Query: 375  NNACGIEQIAGYATI 389
            +N+CG+ ++A  A +
Sbjct: 1819 DNSCGVSEMASSAIL 1833


>gi|341878637|gb|EGT34572.1| hypothetical protein CAEBREN_13324 [Caenorhabditis brenneri]
          Length = 478

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 163/340 (47%), Gaps = 46/340 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPE 114
           I  +F  FI +  ++Y N  E+ +RF  FK++       +K+E+    YG ++FSD +  
Sbjct: 172 IWNSFLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTM 231

Query: 115 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E       ++W +     +  D+   EK  + + ++  +PD++DWR+        +Q +C
Sbjct: 232 EFKETMLPYQWEQP----VPMDQANFEKEGVTISEED-LPDSFDWREHGAVTQVKNQGSC 286

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG + +   KLV  S+ +LV+C   
Sbjct: 287 GSCWAFSTTGN-----------------------IEGAWFLAKKKLVSLSEQELVDCDSV 323

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GLE E  YPY   +G    C   +  + ++        
Sbjct: 324 DQGCNGGL--PSNAYKEIIRMGGLEPEDAYPY---DGRGETCHLVRKDIAVYINGSVELP 378

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    M+K L   GP+S+ LN++ +  Y    +      C P+ L H VL+VGYGK    
Sbjct: 379 HDEVEMQKWLVTKGPISIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDGRK 438

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWGP   + G+FK+ RG N CG++++A  + ++
Sbjct: 439 PYWIVKNSWGPTWGEAGYFKLYRGKNVCGVQEMATSSLVN 478


>gi|168059933|ref|XP_001781954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666600|gb|EDQ53250.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 189/401 (47%), Gaps = 84/401 (20%)

Query: 26  GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENIL---ETFKAFIVKRGRQYAND 82
           G+ + L L  +  ++TD V  RVD     GS+      +L   + F++FI + G+ Y   
Sbjct: 18  GLVASLPLRDVIQQVTDGV--RVD-----GSVEQFAHALLGAEKQFESFIKEFGKVYHTV 70

Query: 83  EEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIV 133
           EE + RF+ FK +  +  KH+       +G + FSD + EE   +  G K          
Sbjct: 71  EEYEHRFKVFKSNLLRALKHQALDPTASHGVTMFSDLTEEEFATQYLGLKRPSALSTAPT 130

Query: 134 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYL 193
           A          E    G +P ++DWR+K   GP  +Q +CGSCWAFS  G          
Sbjct: 131 A----------EPLPTGDLPPSFDWREKGAVGPVKNQGSCGSCWAFSTTGA--------- 171

Query: 194 NHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEP 244
                         +EG + + TGKL+  S+ QLV+C  QC         +GC G     
Sbjct: 172 --------------VEGAHFLATGKLLSLSEQQLVDCDHQCDPEEAQACDAGCGGGLMTN 217

Query: 245 SIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYK 302
           + +Y  +A GLE E DYPYK  +G   KC ++ +KV      +F +    E  +   L K
Sbjct: 218 AYKYVEEAGGLELESDYPYKGRDG---KCQFNPNKVAAKV-SNFTNIPIDEDQVAAYLIK 273

Query: 303 YGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PY 352
            GPL++ +N++ +  Y      PI      C+  +L H VLLVGY +           PY
Sbjct: 274 SGPLAIGINAEFMQTYVAGVSCPI-----FCNKRNLDHGVLLVGYAEHGFAPARLAYKPY 328

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQI--AGYATIDV 391
           W+++NSWGP+  D+G++KI RG+  CG+  +  A  A +DV
Sbjct: 329 WIIKNSWGPMWGDKGYYKICRGHGECGLNTMVSAVAANVDV 369


>gi|395851695|ref|XP_003798388.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Otolemur garnettii]
          Length = 491

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 170/362 (46%), Gaps = 50/362 (13%)

Query: 42  DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 100
           +Q ++ V +L  +G L+ D +  +L  FK F+    R Y + EE + R   F  +  +  
Sbjct: 167 NQTLSSVISLLNKGPLSKDFSMQMLSVFKNFLTTYNRTYESKEETQWRLSIFINNMVRAQ 226

Query: 101 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
           +         RYG ++FSD + EE             Y   +   +  +KM +      P
Sbjct: 227 KIQALDQGTARYGITKFSDLTEEEF---------RTIYLNPLLREDPGKKMRVAKPVGDP 277

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P  WDWR K       +Q  CGSCWAFS+ G                        +EGQ
Sbjct: 278 APPEWDWRNKGAVTNVKNQGMCGSCWAFSVTGN-----------------------VEGQ 314

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +K G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E+DY Y+   G+
Sbjct: 315 WFLKQGTLLSLSEQELLDCDKMDKACLGGL--PSNAYSAIKNLGGLETEEDYSYQ---GQ 369

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C +   K K++        +  + +   L K GP+SV +N+  +  Y     R    
Sbjct: 370 MQACNFSAEKAKVYINDSVELSHNEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRP 429

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            C+P+ + HAVL+VGYG + +IP+W ++NSWG    ++G++ + RG+ ACG+  +A  A 
Sbjct: 430 LCTPWLIDHAVLIVGYGNRSDIPFWAIKNSWGTDWGEQGYYYLHRGSGACGVNTMASSAV 489

Query: 389 ID 390
           ++
Sbjct: 490 VE 491


>gi|442736236|gb|AGC65593.1| cathepsin [Achaea janata granulovirus]
          Length = 338

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 166/344 (48%), Gaps = 48/344 (13%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHER--Y 103
           A+   + +D E+    F  F++K  + Y ++ E   +FE FK+      D + K E   +
Sbjct: 18  ALPAKIHYDLEDAERLFDLFMIKYHKVYRSELERAAKFEVFKRNLATLNDKNDKDENATF 77

Query: 104 GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKM-LMEVEKDGP---VPDAWDW 158
             + ++DRS  E+L  +TGF   +  + R  +   + + M +  V    P   +P+++DW
Sbjct: 78  DINAYTDRSRNELLRTQTGF---QSNFARNASPFTQKKGMCITRVVAGTPPCLLPESFDW 134

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R KNV  P  DQ  CGSCWAF+    F                       E QYAIK GK
Sbjct: 135 RDKNVVTPVKDQLECGSCWAFTAIANF-----------------------ESQYAIKHGK 171

Query: 219 LVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKS 277
            V+FS+  L++C +   GCDG     + E      G+  E DYPY     E F CA + +
Sbjct: 172 HVDFSEQHLLDCDQLNYGCDGGLMHWAFEEIIRMGGVVLEYDYPYTGV--ESF-CANNVN 228

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LG 336
                +G         E ++++L   GP++V L+   I DY    +      C   + L 
Sbjct: 229 MYTTISGCVQYDLRDEEKLRELLVTNGPIAVALDIVDIVDYKSGVV----SFCGTNNGLN 284

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           HAVLLVGYG    I YWL++NSWG    +EG+F+I+R  N+CGI
Sbjct: 285 HAVLLVGYGVDKTIEYWLLKNSWGTDWGEEGYFRIKRNRNSCGI 328


>gi|46309423|ref|YP_006313.1| ORF31 [Agrotis segetum granulovirus]
 gi|46200640|gb|AAS82707.1| ORF31 [Agrotis segetum granulovirus]
          Length = 327

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 171/333 (51%), Gaps = 46/333 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F+ F+ K  + Y+++EE + +F+ FK +    +E+        Y  + +SD +  E+L K
Sbjct: 25  FEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSLSNSAVYDINFYSDMNKNELLRK 84

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TGFK + +     ++   K  K L+       +PD++DWR ++V     +Q  CGSCWA
Sbjct: 85  QTGFKINLKKNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHVITSVKNQRDCGSCWA 144

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS                           +E  YAIK  KL++ S+ QLV C +Q +GC+
Sbjct: 145 FSTIAN-----------------------IESLYAIKYNKLLDLSEQQLVNCDEQNNGCN 181

Query: 239 GCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 297
           G     ++E    Q G+ +E D+PY  ++G    C   +  V +     F+  N  + ++
Sbjct: 182 GGLMHWAMEEIIRQGGVSNETDFPYTASDG---FCKRKQGFVNINGCNQFILSN-EDRLR 237

Query: 298 KILYKYGPLSVLLNSDLIHDYNG--TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           ++L   GP+S+ ++   + DY+   +   +ND       L HAVLLVGYG ++NIPYW++
Sbjct: 238 ELLIFNGPISIAIDVIDVIDYSQGISSTCRNDNG-----LNHAVLLVGYGVKNNIPYWIL 292

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           +NSWG    + G+F+++R  N+CG+  I  YA 
Sbjct: 293 KNSWGSQWGENGYFRVQRNINSCGM--INDYAA 323


>gi|405977658|gb|EKC42097.1| Cathepsin F [Crassostrea gigas]
          Length = 715

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 161/337 (47%), Gaps = 51/337 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYF---------KQDGHKKHERYGTSEFSDRSPEEIL 117
            F+ F     R Y + +E K RF+ F          QD  K    YG ++F+D S  E  
Sbjct: 417 VFQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFK 476

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
              G  W +   + +   + K+ +M         +P+++DWR+        +Q +CGSCW
Sbjct: 477 QYVGKVWDQNANKGM--KKAKIPEM-------NSLPNSFDWREHGAVTEVKNQGSCGSCW 527

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS  G                        +EGQ+AI   KLV  S+ +LV+C K   GC
Sbjct: 528 AFSTTGN-----------------------IEGQWAISKKKLVSLSEQELVDCDKVDEGC 564

Query: 238 DGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 293
           +G    PS  Y       GLE+E DY Y+   G   KC+ DKSK+++   G   +  N +
Sbjct: 565 NGGL--PSQAYKEIIRLGGLETETDYKYR---GHNEKCSMDKSKIRVKINGSVSISSNET 619

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
           E M   L K GP+S+ +N+  +  Y G         C+P +L H VL+VGYG + + PYW
Sbjct: 620 E-MAAWLVKNGPISIGINAFAMQFYMGGISHPWKIFCNPKELDHGVLIVGYGVKGSKPYW 678

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +++NSWGP   ++G++ + RG   CG+  +   A ++
Sbjct: 679 IIKNSWGPDWGEKGYYLVYRGAGVCGLNTMCTSAVVN 715


>gi|354496134|ref|XP_003510182.1| PREDICTED: cathepsin F [Cricetulus griseus]
 gi|344250261|gb|EGW06365.1| Cathepsin F [Cricetulus griseus]
          Length = 462

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F ++  K  +         +YG ++FSD + E
Sbjct: 161 MTTVFKDFMITYNRTYESREETQWRLTVFTRNMVKAQKIEALDRGTAQYGITKFSDLTEE 220

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  ++   KM +    + P P  WDWRKK       DQ  CG
Sbjct: 221 EFYT---------IYLNPLLQKKPGSKMSLAKSINDPAPPEWDWRKKGAVTKVKDQGMCG 271

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 272 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 308

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  YT      GLE+E DY YK   G    C +   K K++         
Sbjct: 309 KACLGGM--PSNAYTAIKSLGGLETEDDYSYK---GYVQACNFSAQKAKVYINDSVELSK 363

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
               M   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + N P
Sbjct: 364 NESKMAAWLAQKGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLLVGYGNRSNTP 423

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           YW ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 424 YWAIKNSWGSNWGEEGYYYLYRGSGACGVNTMASSAVVN 462


>gi|224285931|gb|ACN40679.1| unknown [Picea sitchensis]
          Length = 366

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 176/373 (47%), Gaps = 67/373 (17%)

Query: 36  LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           L  ++TD+VV+    L    +L     N    F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSALF----NAEVHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 96  -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 147
                 H+K      +G ++FSD      L + GF+  +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSD------LTQEGFR-HQYLGLRAPPLRDAHDAPILPTN 137

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P+ +DWR+K       +Q +CGSCWAFS  G                        
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGA----------------------- 171

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           LEG   +KTG+LV  S+ QLV+C  +C         SGC+G     + +Y  ++G LE E
Sbjct: 172 LEGANFLKTGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKE 231

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           +DYPY   +G    C+++K+K+        +       +   L K GPLSV +N+  +  
Sbjct: 232 EDYPYTGKDG---TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQT 288

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFK 370
           Y G         CS  +L H VLLVGYG       +  + PYW+++NSWGP   + G++K
Sbjct: 289 YVGG--VSCPYVCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYK 346

Query: 371 IERGNNACGIEQI 383
           + RG+N CGI  +
Sbjct: 347 LCRGHNVCGINNM 359


>gi|116786550|gb|ABK24153.1| unknown [Picea sitchensis]
          Length = 394

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 162/341 (47%), Gaps = 60/341 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F+ K  ++Y+  EE   RF  FK++ HK  +H++      +G ++FSD + EE   +
Sbjct: 75  FAHFVKKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDRDAIHGINKFSDLTEEEFHEQ 134

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                   T  R ++ R +   +L   +    +P  +DWR+     P  +Q ACGSCW F
Sbjct: 135 ---YLGLTTPPRSLSQRTQPAPILPTDD----LPPDFDWRELGAVTPVKNQGACGSCWTF 187

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        +EG   +KTGKL+  S+ QLV+C  +C     
Sbjct: 188 STTGA-----------------------MEGANFMKTGKLISLSEQQLVDCDHECDSSEP 224

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + +Y  +AG L+ E+DYPY   +G    C +D +KV          
Sbjct: 225 DVCDSGCNGGLMTTAYQYALKAGGLQREEDYPYTGIDG---SCKFDNTKVAAMVANFSTV 281

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG---- 345
               + +   L K GPL+V +N+  +  Y G         C+  +L H VLLVGYG    
Sbjct: 282 SIDEDQIAANLVKNGPLAVGINAAFMQTYVGG--VSCPYVCNKQNLDHGVLLVGYGAAGY 339

Query: 346 ---KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
              +  N P+W+++NSWGP   ++G++K+ RG+N CGI  +
Sbjct: 340 APGRLKNKPFWIIKNSWGPDWGEDGYYKLCRGHNVCGINTM 380


>gi|194705198|gb|ACF86683.1| unknown [Zea mays]
 gi|413936851|gb|AFW71402.1| cysteine protease1 [Zea mays]
          Length = 371

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 174/369 (47%), Gaps = 84/369 (22%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPE 114
           N    F +F+ + G+ Y + +E   R   FK +    ++H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 168
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           +Q +CGSCW+FS +                       G LEG + + TGKL   S+ Q V
Sbjct: 154 NQGSCGSCWSFSAS-----------------------GALEGAHYLATGKLEVLSEQQFV 190

Query: 229 ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 278
           +C  +C         SGC+G     +  Y  +A GLESEKDYPY  ++G   KC +DKSK
Sbjct: 191 DCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSK 247

Query: 279 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY---- 333
           + + + ++F   +  E  +   L K+GPL++ +N+  +  Y G           PY    
Sbjct: 248 I-VASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGR 299

Query: 334 DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 383
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 300 HLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSM 359

Query: 384 AGYATIDVV 392
              +T+  V
Sbjct: 360 V--STVSAV 366


>gi|162459555|ref|NP_001105685.1| cysteine proteinase 1 precursor [Zea mays]
 gi|1706260|sp|Q10716.1|CYSP1_MAIZE RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|643597|dbj|BAA08244.1| cysteine proteinase [Zea mays]
          Length = 371

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 174/369 (47%), Gaps = 84/369 (22%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPE 114
           N    F +F+ + G+ Y + +E   R   FK +    ++H+       +G ++FSD +P 
Sbjct: 43  NAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPA 102

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAG 168
           E           RTY  +   R  + + L E   + PV      PD +DWR     GP  
Sbjct: 103 EF---------RRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVK 153

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           +Q +CGSCW+FS +                       G LEG + + TGKL   S+ Q V
Sbjct: 154 NQGSCGSCWSFSAS-----------------------GALEGAHYLATGKLEVLSEQQFV 190

Query: 229 ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 278
           +C  +C         SGC+G     +  Y  +A GLESEKDYPY  ++G   KC +DKSK
Sbjct: 191 DCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG---KCKFDKSK 247

Query: 279 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY---- 333
           + + + ++F   +  E  +   L K+GPL++ +N+  +  Y G           PY    
Sbjct: 248 I-VASVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGG-------VSCPYICGR 299

Query: 334 DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 383
            L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 300 HLDHGVLLVGYGASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSM 359

Query: 384 AGYATIDVV 392
              +T+  V
Sbjct: 360 V--STVSAV 366


>gi|321460289|gb|EFX71333.1| hypothetical protein DAPPUDRAFT_189155 [Daphnia pulex]
          Length = 266

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 151/297 (50%), Gaps = 45/297 (15%)

Query: 103 YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           YG + FSD S  E      GF  S R      ++    +  + E++    +PD +DWR  
Sbjct: 6   YGDTPFSDWSAAEYKAHLAGFNPSLRQ-----SNARLRQAAIPEID----LPDEFDWRNH 56

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
           +V  P  DQ +CGSCWAFS+ G                        +EG YA++ G L+ 
Sbjct: 57  SVVTPVKDQGSCGSCWAFSVTGN-----------------------VEGIYAVRNGDLLS 93

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ +LV+C K  SGC+G   E + +  H   GLE+E DYPY   NG + KC ++ +  +
Sbjct: 94  LSEQELVDCDKLDSGCNGGLPENAYKAIHDIGGLETESDYPY---NGHENKCKFNSNITR 150

Query: 281 L-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
           +  TG   +  N +E M + L + GP+S+ +N++ +  Y G         C P  + H V
Sbjct: 151 VQVTGGVEISTNETE-MAQWLIQNGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGV 209

Query: 340 LLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           L+VGYG          +PYW+V+NSWG    ++G++++ RG+  CG+ Q+   AT+D
Sbjct: 210 LIVGYGVSQYPKFNKTLPYWIVKNSWGTRWGEQGYYRVFRGDGTCGLNQMCTSATLD 266


>gi|116779325|gb|ABK21238.1| unknown [Picea sitchensis]
 gi|148905850|gb|ABR16087.1| unknown [Picea sitchensis]
 gi|148908434|gb|ABR17330.1| unknown [Picea sitchensis]
 gi|148908881|gb|ABR17545.1| unknown [Picea sitchensis]
 gi|224286109|gb|ACN40765.1| unknown [Picea sitchensis]
          Length = 366

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 174/373 (46%), Gaps = 67/373 (17%)

Query: 36  LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           L  ++TD+VV+    L    +L     N    F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSALF----NAEVHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 96  -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 147
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P+ +DWR+K       +Q +CGSCWAFS  G                        
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGA----------------------- 171

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           LEG   +KTG+LV  S+ QLV+C  +C         SGC+G     + +Y  ++G LE E
Sbjct: 172 LEGANFLKTGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKE 231

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           +DYPY   +G    C+++K+K+        +       +   L K GPLSV +N+  +  
Sbjct: 232 EDYPYTGKDG---TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQT 288

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFK 370
           Y G         CS  +L H VLLVGYG       +  + PYW+++NSWGP   + G++K
Sbjct: 289 YVGG--VSCPYVCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYK 346

Query: 371 IERGNNACGIEQI 383
           + RG+N CGI  +
Sbjct: 347 LCRGHNVCGINNM 359


>gi|116787909|gb|ABK24688.1| unknown [Picea sitchensis]
 gi|224284108|gb|ACN39791.1| unknown [Picea sitchensis]
 gi|224285024|gb|ACN40241.1| unknown [Picea sitchensis]
          Length = 366

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 174/373 (46%), Gaps = 67/373 (17%)

Query: 36  LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           L  ++TD+VV+    L    +L     N    F+ FI + G++Y+  EE + RF  FK +
Sbjct: 29  LIRQVTDEVVSDPQILDARSALF----NAEVHFRHFIRRYGKKYSGPEEHEHRFGVFKSN 84

Query: 96  -----GHKK---HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 147
                 H+K      +G ++FSD + EE          +    R    R+  +  ++   
Sbjct: 85  LLRALEHQKLDPRASHGVTKFSDLTQEEFR-------HQYLGLRAPPLRDAHDAPILPTN 137

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P+ +DWR+K       +Q +CGSCWAFS  G                        
Sbjct: 138 D---LPEDFDWREKGAVTEVKNQGSCGSCWAFSTTG-----------------------A 171

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           LEG   +KTG+LV  S+ QLV+C  +C         SGC+G     + +Y  ++G LE E
Sbjct: 172 LEGANFLKTGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKE 231

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           +DYPY   +G    C+++K+K+        +       +   L K GPLSV +N+  +  
Sbjct: 232 EDYPYTGKDG---TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQT 288

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFK 370
           Y G         CS  +L H VLLVGYG       +  + PYW+++NSWGP   + G++K
Sbjct: 289 YVGG--VSCPYVCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYK 346

Query: 371 IERGNNACGIEQI 383
           + RG+N CGI  +
Sbjct: 347 LCRGHNVCGINNM 359


>gi|410913409|ref|XP_003970181.1| PREDICTED: cathepsin F-like [Takifugu rubripes]
          Length = 476

 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 157/340 (46%), Gaps = 50/340 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPE 114
           +L  FK F+ K  + Y++ EE   R + FK         Q   +    YG ++FSD + E
Sbjct: 174 LLGLFKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSDLTEE 233

Query: 115 EILCKTGFKWSERTYERIVADREKVEK-MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E            TY   +  +  + + M        P P +WDWR      P  +Q  C
Sbjct: 234 EF---------RLTYLNPLLSQWTLRRPMKPASPARSPAPASWDWRDHGAVSPVKNQGLC 284

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS+ G                        +EGQ+ +K GKL+  S+ +LV+C   
Sbjct: 285 GSCWAFSVTGN-----------------------IEGQWFLKHGKLLSLSEQELVDCDGL 321

Query: 234 CSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C G    PS  Y       GLE+E DY Y   +G K KC++   KV  +        
Sbjct: 322 DHACRGGL--PSNAYEAIEGLGGLEAENDYTY---SGHKQKCSFATEKVAAYINSSVELP 376

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +    M   L + GP+SV LN+  +  Y           C+P+ + HAVLLVGYG+++ I
Sbjct: 377 SDENEMAAWLAENGPVSVALNAFAMQFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGI 436

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + +G+NACGI ++   A I+
Sbjct: 437 PFWAIKNSWGEDYGEEGYYYLYKGSNACGINKMGSSAVIN 476


>gi|432091112|gb|ELK24324.1| Cathepsin W [Myotis davidii]
          Length = 370

 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 169/375 (45%), Gaps = 71/375 (18%)

Query: 52  AIEGSLTFDNEN-----ILETFKAFIVKRGRQYANDEEIKERFEYFKQD-GHKKH----- 100
            IE SL   N       + E F  F ++  R Y+N  E   R + F ++  H +      
Sbjct: 21  GIEDSLRVQNPGAGPLELKEVFTLFQIQYNRSYSNPAEYAHRLDIFARNLAHAQRLQEED 80

Query: 101 ---ERYGTSEFSDRSPEEILCKTGFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDA 155
                +G + FSD + EE          ++ Y  +R       V++ +   E    VP  
Sbjct: 81  LGTAEFGVTAFSDLTEEEF---------DQLYGNQRAAGRAPNVDREVGSDEWQESVPST 131

Query: 156 WDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI 214
            DWRK   V  P  DQ  C  CWA + AG                        +E Q+ I
Sbjct: 132 CDWRKAPGVMSPVKDQKTCSCCWAMAAAGN-----------------------IEAQWGI 168

Query: 215 KTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCA 273
           KT + VE S  +L++C +   GC G F ++  I   + +GL SEKDYP++ A   + KC 
Sbjct: 169 KTRQSVEVSVQELLDCGRCGDGCSGGFVWDAFITVLNNSGLASEKDYPFQGA--VRAKCQ 226

Query: 274 YDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
             K K K+   +DF+  + +E  +   L   GP++V +N  L+  Y    I+    TC P
Sbjct: 227 AKKHK-KVAWIQDFIMLSDNEQRIAWYLATEGPITVTINKKLLQQYQNGVIKATQTTCDP 285

Query: 333 YDLGHAVLLVGYGKQDNI-----------------PYWLVRNSWGPIGPDEGFFKIERGN 375
            ++ H VLLVG+GK  ++                 PYW+++NSWG    ++G+F++ RG+
Sbjct: 286 QNVDHVVLLVGFGKTKSVEGRQAKGVPGHSRRRSTPYWILKNSWGANWGEKGYFRLHRGS 345

Query: 376 NACGIEQIAGYATID 390
           NACGI +    A +D
Sbjct: 346 NACGITKYPITARVD 360


>gi|6649593|gb|AAF21470.1|U85983_1 cysteine proteinase [Clonorchis sinensis]
          Length = 259

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 136/292 (46%), Gaps = 44/292 (15%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
            YG ++FSD + EE   +         Y R+  D   V + L   E      + +DWR+ 
Sbjct: 7   HYGVTQFSDLTSEEFKTR---------YLRMRFDGPIVSEDLTPEEDVTMDNEKFDWREH 57

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  DQ  CGSCWAFS+ G                        + GQ+  KTG L+ 
Sbjct: 58  GAVGPVLDQGKCGSCWAFSVIGN-----------------------VVGQWFRKTGHLLA 94

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
            S+ QLV+C     GCDG +  P   YT      GLE   DYPY    G    C  DKSK
Sbjct: 95  LSEQQLVDCDYLDDGCDGGY--PPQTYTAIQKMGGLELASDYPYTGVGG---ICHMDKSK 149

Query: 279 -VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
            V    G   L  +     +K L   GPLS  LN+D +  Y G  +R   + C P  + H
Sbjct: 150 FVAYVNGSTILPLSEKVQAQK-LRAIGPLSSALNADTLQLYKGGIMRP--KWCDPAGVNH 206

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           AVL VGYG Q+  PYW+V+NSWG    +EG+F+I RG+  CGI  I   A I
Sbjct: 207 AVLTVGYGVQNGKPYWIVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTTAII 258


>gi|340053963|emb|CCC48256.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 452

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 155/335 (46%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDSKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSE 294
            F + + E+    +   + +EK YPY +  GE+  C     +V    TG  D  H    +
Sbjct: 184 GFMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHEVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332


>gi|118395092|ref|XP_001029901.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284178|gb|EAR82238.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 344

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 173/368 (47%), Gaps = 45/368 (12%)

Query: 43  QVVARVDTLAIEGSLTFDNENI----LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 98
           + +  +  L    S  + NE I    L  F+ F  K  + Y N+ E    F  +K     
Sbjct: 4   KFIVYIFVLVAVASCAYMNETIDPQRLAEFEEFKSKFNKYYHNEHEHHSSFHNYKTSREH 63

Query: 99  --KHE------RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKM---LMEV 146
             KH+      ++G ++FSD SPEE   K   F +S     +    + K E M   L + 
Sbjct: 64  IVKHQMENPNAKFGHTKFSDMSPEEFENKMLNFDFSLFKKAKSQGIKLKAEPMKGYLRQG 123

Query: 147 EK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
           E   +  +P+++DWR K +  PA  Q  CGSCW F+  G                     
Sbjct: 124 ENVDNSDLPESFDWRDKGIITPAKFQNTCGSCWTFATTG--------------------- 162

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKN 264
             ++E QYA+K G+L+ FS+  L++C     GC G     + ++  Q+G     D  Y +
Sbjct: 163 --VIESQYALKYGELLHFSEQMLLDCDNINQGCRGGLMTDAYQFLQQSGGIQTAD-TYGD 219

Query: 265 ANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
              +K  C +DK+KVK      +      ET+++ L K GP++V +N+  +  Y G  + 
Sbjct: 220 YKNKKDICNFDKAKVKAKVVDWYQIPENEETIRRELVKNGPVAVGINARTLQFYEGGIV- 278

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
            + + C    + HAVL+VGYG ++ IPYWL++N WG     +GFFK+ RG   CGI   A
Sbjct: 279 -DPKNCDD-KINHAVLIVGYGVEEGIPYWLIKNQWGAEWGIKGFFKLIRGKKQCGIHTYA 336

Query: 385 GYATIDVV 392
             A ++ V
Sbjct: 337 SIAYVEKV 344


>gi|55979119|gb|AAV69023.1| cysteine protease [Opisthorchis viverrini]
 gi|224923980|gb|ACN68966.1| cathepsin F-like cysteine protease [Opisthorchis viverrini]
          Length = 326

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 160/344 (46%), Gaps = 54/344 (15%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFS 109
           F+ ++    ++ F +K  + Y+ND++ + RF  FK         Q   +    YG ++FS
Sbjct: 23  FEPDDARALYEEFKLKYKKTYSNDDD-ELRFRIFKDNLERAKRLQAMEQGTAEYGVTQFS 81

Query: 110 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
           D + EE   +         Y R+  D   V +     E        +DWR     GP  D
Sbjct: 82  DLTSEEFKTR---------YLRMRFDEPIVNEDPTPQEDVTMDNSNFDWRDHGAVGPVLD 132

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAFS+ G                        +EGQ+  KTG L+  S+ QL++
Sbjct: 133 QGDCGSCWAFSVIGN-----------------------VEGQWFRKTGDLLGLSEQQLID 169

Query: 230 CAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGK 285
           C     GCDG +  P   Y+      GLE   DYPY   +G    C  D+SK V    G 
Sbjct: 170 CDHSDQGCDGGY--PPQTYSAIEEMGGLELRSDYPYTGKDG---ICYMDQSKFVAYVNGS 224

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             L +   +T  K L + GPLS  LN+ L+  Y    +R     C+P +L HAVL VGYG
Sbjct: 225 TRLPWC-EKTQAKSLKEIGPLSSGLNAVLLQLYKRGIMRP--RWCNPAELNHAVLTVGYG 281

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +  +PYW+V+NSWG    ++G+F+I RG+  CGI +    A +
Sbjct: 282 MEHRMPYWIVKNSWGKRFGEKGYFRIYRGDGTCGINRAVTTAVV 325


>gi|113195461|ref|YP_717598.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
 gi|66968272|gb|AAY59557.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
          Length = 325

 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 158/337 (46%), Gaps = 54/337 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 119
           F++F+    + Y + +E   R++ FK +  +         H  +  ++FSD S  EI+ K
Sbjct: 27  FESFVANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDHAVFSINKFSDMSKSEIISK 86

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSC 176
                    Y  +       E     +  DGP    P  +DWR+ N   P   Q  CGSC
Sbjct: 87  ---------YTGLSLPSLMQENFCRAIILDGPPNKAPINFDWRQYNAVTPVRVQGNCGSC 137

Query: 177 WAFS-IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           WAFS +AG                        +E QY+IK  K +  S  QLV+C     
Sbjct: 138 WAFSTLAG------------------------IESQYSIKYNKQISLSVQQLVDCDTSNM 173

Query: 236 GCDGCFFEPSIEYTHQAG--LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           GC G     ++E    AG  +  E+DYPYK  + ++    ++   V++     ++  N  
Sbjct: 174 GCAGGLLHTALEQIINAGGGVLQEEDYPYKGVD-KQCNLPHNNFAVQVLGCYRYIVMN-E 231

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
           E +K +L   GP+ V +++  I DY+   IR    TC+ Y L HAVLLVGYG QD +PYW
Sbjct: 232 EKLKDVLRAVGPIPVAIDAASIVDYSRGIIR----TCTYYGLNHAVLLVGYGVQDGVPYW 287

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
            ++N+WG    + G+F++ +  N+CG I  +A  A I
Sbjct: 288 TLKNTWGDDWGEHGYFRVRQNVNSCGIINDLASTAVI 324


>gi|74273320|gb|ABA01328.1| secreted cathepsin F [Teladorsagia circumcincta]
          Length = 364

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 154/332 (46%), Gaps = 42/332 (12%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 118
           F +FI +  + Y N+ E  +RF  FK         Q+  K    YG ++F+D SPEE   
Sbjct: 64  FTSFIERHDKVYRNESEALKRFGIFKRNLEIIRSAQENDKGTAIYGINQFADLSPEE-FK 122

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           KT       T+++       V+     V+   P+P+++DWR+         +  C +CWA
Sbjct: 123 KTHLP---HTWKQPDHPNRIVDLAAEGVDPKEPLPESFDWREHGAVTKVKTEGHCAACWA 179

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +   KLV  S  QL++C     GC+
Sbjct: 180 FSVTGN-----------------------IEGQWFLAKKKLVSLSAQQLLDCDVVDEGCN 216

Query: 239 GCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 297
           G F  +   E     GLE E  YPY+ A  E+  C    S + ++        +  E M+
Sbjct: 217 GGFPLDAYKEIVRMGGLEPEDKYPYE-AKAEQ--CRLVPSDIAVYINGSVELPHDEEKMR 273

Query: 298 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 357
             L K GP+S+ +  D I  Y G   R    TC    + H  LLVGYG + NIPYW+++N
Sbjct: 274 AWLVKKGPISIGITVDDIQFYKGGVSRPT--TCRLSSMIHGALLVGYGVEKNIPYWIIKN 331

Query: 358 SWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           SWGP   ++G++++ RG NAC I +    A +
Sbjct: 332 SWGPNWGEDGYYRMVRGENACRINRFPTSAVV 363


>gi|170032975|ref|XP_001844355.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167873312|gb|EDS36695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1454

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 170/345 (49%), Gaps = 58/345 (16%)

Query: 68   FKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPEEILC 118
            F  F  +  R Y +  E + RF  FK +  K     K+E    +YG + F+D +  E   
Sbjct: 1146 FDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSAEYRA 1205

Query: 119  KTGFKWSERTYERIVADRE-----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
            +TG          +V  RE      +   + E+++   +PDA+DWR+        +Q  C
Sbjct: 1206 RTG----------LVVPREGDEVNHIRNPMAEIDEHMELPDAFDWRELGAVSEVKNQGNC 1255

Query: 174  GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            GSCWAFS+ G                        +EG + +KT KL E+S+ +L++C   
Sbjct: 1256 GSCWAFSVVGN-----------------------IEGLHQVKTKKLEEYSEQELLDCDTV 1292

Query: 234  CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
             S C+G F + + +   +  GLE E +YPY  A  +K  C ++K+   +   K  +    
Sbjct: 1293 DSACNGGFMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNKTMAHVRV-KGAVDLPK 1349

Query: 293  SET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD--- 348
            +ET + + L   GP+S+ LN++ +  Y G         CS  +L H VL+VGYG ++   
Sbjct: 1350 NETAIAQFLVANGPVSIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEYPM 1409

Query: 349  ---NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                +PYW+V+NSWGP   ++G++++ RG+N CG+ ++A  A ++
Sbjct: 1410 FNKTLPYWIVKNSWGPKWGEQGYYRVFRGDNTCGVSEMATSAVLE 1454


>gi|340053965|emb|CCC48258.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 441

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSE 294
              + + E+    +   + +EK YPY +  GE+  C     KV    TG  D  H    +
Sbjct: 184 GLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332


>gi|332374900|gb|AEE62591.1| unknown [Dendroctonus ponderosae]
          Length = 359

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 158/346 (45%), Gaps = 70/346 (20%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 113
           ETF  F  K G+ Y ND E+  R E FK++  K  E              G ++FSD + 
Sbjct: 22  ETFVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDLTE 81

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKKNVTGPA 167
            E             ++ ++      +++  ++EK          P + +W +K V  P 
Sbjct: 82  AE-------------FQALLTMSPLTDQLTKQMEKYNSEFDIKTAPVSVNWAEKGVVTPV 128

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q  CGSCW F+  G                        +E + A+KTG LV  S+ QL
Sbjct: 129 KNQGNCGSCWTFTTTGT-----------------------IESRLALKTGSLVSLSEQQL 165

Query: 228 VECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLF 282
           ++C +  +GCDG     +++Y   AGL +E +YPYK  NG      K   AY K    ++
Sbjct: 166 LDCNRVNAGCDGGVLSYALQYVESAGLTTEDEYPYKAWNGTCNSTHKPVAAYTKGYTLIY 225

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           T  +      S+ MK +    GP++V LN+DL+  Y+      N   CS   + H  L+V
Sbjct: 226 TRSE------SDLMKAV--AEGPVAVALNADLLQYYSKGIF--NPSACSS-TVNHGGLVV 274

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           GY +   +PYW+++NSWG    + G+F++ +G N CGI     Y T
Sbjct: 275 GYEENATLPYWIIKNSWGATWGENGYFRMAKGYNLCGITSQPIYPT 320


>gi|4757570|gb|AAD29084.1|AF082181_1 cysteine proteinase precursor [Solanum melongena]
          Length = 363

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 173/384 (45%), Gaps = 87/384 (22%)

Query: 38  DRITDQVVARVDTLAIEGSLTFDNE--NILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           D +  QVV+  D          DN   N    F  F  K G+ YA+ EE   R + FK +
Sbjct: 25  DPLIRQVVSETD----------DNHMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKAN 74

Query: 96  --GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 147
               ++H+       +G ++FSD +P E           RTY  +   R K+      + 
Sbjct: 75  LRRARRHQLLDPTAEHGITQFSDLTPSEF---------RRTYLGLHKPRPKLNAQKAPIL 125

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P+ +DWR+K       +Q +CGSCW+FS  G                        
Sbjct: 126 PTSDLPEDFDWREKGAVTGVKNQGSCGSCWSFSTTG-----------------------A 162

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           +EG + + TG+LV  S+ QLV+C  +C         +GC+G     + EYT +AG L+ E
Sbjct: 163 VEGAHFLATGELVSLSEQQLVDCDHECDAEEKSECDAGCNGGLMTTAFEYTLKAGGLQRE 222

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           KDYPY   +G   KC +DKSK+        +     + +   L K+GPL+V +N+  +  
Sbjct: 223 KDYPYTGRDG---KCHFDKSKIAASVANFSVIGLDEDQIAANLVKHGPLAVGINAAWMQT 279

Query: 318 YN---GTPI---RKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGP 364
           Y      P+   ++ D         H VLLVGYG       +    PYW+++NSWG    
Sbjct: 280 YMRGVSCPLICFKRQD---------HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGENWG 330

Query: 365 DEGFFKIERGNNACGIEQIAGYAT 388
           + G++KI RG+N CG++ +    T
Sbjct: 331 EHGYYKICRGHNICGVDAMVSTVT 354


>gi|196014793|ref|XP_002117255.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
 gi|190580220|gb|EDV20305.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
          Length = 353

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 161/340 (47%), Gaps = 52/340 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHE----RYGTSEFSDRSPE 114
           + + +  FI +  + Y N +E+  R++ F ++  +     KH+    RYG ++ SD + +
Sbjct: 51  MFKNYLQFIKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKLSDLTDQ 110

Query: 115 EILCKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E+      K W ++ Y    A+  ++  +          P ++DWR K       DQ  C
Sbjct: 111 EVKSFYAMKKWPQQLYPTKKANIPQLNSL----------PQSFDWRSKGAVTAVKDQKRC 160

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           G+CWAF+  G                        +EGQ+ +  GKL   S+ +LV+C K 
Sbjct: 161 GACWAFATTGN-----------------------IEGQWYLNKGKLYSLSEQELVDCDKI 197

Query: 234 CSGCDGCFFEPSIEY----THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
             GC G    P   Y        GLE+EKDYPY   NG   KC  +KS+  ++       
Sbjct: 198 DEGCKGGL--PLNAYHSIMNRLGGLETEKDYPYVAKNG---KCKLNKSEEVVYINSSVKV 252

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
                 +   L  +GP+++ +NS  +  Y G      ++ C+P  L H VL+VGYG++ +
Sbjct: 253 STNETDLAAWLVAHGPVAIGINSVNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEEKS 312

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            PYW+++NSWG    ++G++++ RG  ACG+ + A  A +
Sbjct: 313 TPYWIIKNSWGTDWGEKGYYRVVRGIGACGLNKSATSAIV 352


>gi|18141287|gb|AAL60581.1|AF454959_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 368

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 162/366 (44%), Gaps = 82/366 (22%)

Query: 63  NILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDR 111
           N+L +   F  F  K G+ YA+ EE   RF  FK +    ++H+      R+G ++FSD 
Sbjct: 43  NVLSSEDHFSLFKKKFGKVYASREEHDYRFSVFKSNLRRARRHQKLDPSARHGVTQFSDL 102

Query: 112 SPEE-----ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           +  E     +  K GFK        +  D  K   +  E      +P+ +DWR++    P
Sbjct: 103 TRSEFKRKHLGVKGGFK--------LPKDANKAPILPTE-----NLPEEFDWRERGAVTP 149

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             +Q +CGSCW+FS  G                        LEG   + TGKLV  S+ Q
Sbjct: 150 VKNQGSCGSCWSFSATG-----------------------ALEGANFLATGKLVSLSEQQ 186

Query: 227 LVECAKQC---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDK 276
           LV+C  +C         SGC+G     + EYT    GL  E+DYPY   +G    C  DK
Sbjct: 187 LVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDGAT--CKLDK 244

Query: 277 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY--- 333
           SK+        +     E +   L K GPL+V +N+  +  Y G           PY   
Sbjct: 245 SKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICM 297

Query: 334 -DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 385
             L H VLLVGYG            PYW+++NSWG    ++GF+KI RG N CG++ +  
Sbjct: 298 RRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDSLVS 357

Query: 386 YATIDV 391
             T  V
Sbjct: 358 TVTATV 363


>gi|68304200|ref|YP_249668.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973029|gb|AAY83995.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 344

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 185/399 (46%), Gaps = 78/399 (19%)

Query: 12  KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 71
           KK I+    VF   G        +  D I D V A     A +  L ++ E   + F+ F
Sbjct: 2   KKIILFFVFVFASGG------FDNGVDAIIDYVTA-----APQFKLQYNLERAPQYFETF 50

Query: 72  IVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK-TGF 122
             K  + YA+D E   R++ FK        ++       Y  ++F+D +  E++ K TG 
Sbjct: 51  QTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGL 110

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                   R  A +   E +++    DGP     + +DWR+ N      DQ  CGSCWAF
Sbjct: 111 GI------RSPALKNSCEPVIV----DGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAF 160

Query: 180 S-IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           S IAG                        LE QYAIK  + V+ S+ QLV+C     GC 
Sbjct: 161 STIAG------------------------LESQYAIKYNEHVDLSEQQLVDCDTIDMGCA 196

Query: 239 GCFFEPSIE-YTHQAGLESEKDYPYKNANG------EKFKCAYDKSKVKLFTGKDFLHFN 291
           G     + E      GLE E+DYPY++  G      +KF+ + D     +   +D     
Sbjct: 197 GGLLHTAYEEIMAMGGLEYEEDYPYRSVQGPCRLQSDKFEVSVDNCYRYVLYSED----- 251

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
               +K +L++ GP++V +++  + DY G  I     +C  Y L HAVLLVGYG ++ +P
Sbjct: 252 ---KLKDVLHEMGPIAVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLLVGYGIENGVP 304

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           +W+++NSWG    + GF +++R  N+CG I ++A  A I
Sbjct: 305 FWVLKNSWGSDYGENGFVRVKRNVNSCGMINELAASARI 343


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 174/367 (47%), Gaps = 57/367 (15%)

Query: 45  VARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKH 100
           +  +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K +
Sbjct: 42  LTSLDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHN 101

Query: 101 ERY---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
            R+         G +EFSD++ EE+     F+ S      + A R+  + + +      P
Sbjct: 102 VRFIQGQVSYTMGINEFSDKTDEELKRLRCFRGS------LNASRDGSKYITIAA----P 151

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P   DWR K    P  +Q  CGSCWAFS  G                        +EGQ
Sbjct: 152 PPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGA-----------------------IEGQ 188

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE 268
             + TG LV  S+ QLV+C+ +   + C+G   + + +Y   + G+++E  YPY   +GE
Sbjct: 189 NFLATGNLVSLSEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPY--VSGE 246

Query: 269 ----KFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPI 323
                  C ++ K  V   TG   L       +K+ +  YGP+SV +N+ L    +    
Sbjct: 247 TGDANPTCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSG 306

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
             +D+ CS  DL H VLLVGYG+++ IPYWL++NSWGP   + G+ KI R  NN CG+  
Sbjct: 307 VYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVAS 366

Query: 383 IAGYATI 389
           +A Y  I
Sbjct: 367 MASYPLI 373


>gi|328788558|ref|XP_392381.3| PREDICTED: putative cysteine proteinase CG12163-like [Apis
           mellifera]
          Length = 881

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 167/341 (48%), Gaps = 55/341 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F+ FI+K  + +++  E + RF+ FKQ+    +E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIINELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           +  GF+   +    I   + +V  + +        P  +DWR  NV  P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PLKFDWRDYNVVTPVKDQGLCGSCW 687

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS+ G                        +EGQYAIK  KL+  S+ +L++C     GC
Sbjct: 688 AFSVTGN-----------------------VEGQYAIKYKKLLSLSEQELLDCDTLDEGC 724

Query: 238 DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET 295
           +G + E + +   +  GLE E DYPY   +G   KC + K   K+   G   ++   +ET
Sbjct: 725 NGGYMENAYKAIEKLGGLELESDYPY---DGRNEKCHFFKKNAKVQVVGA--VNITSNET 779

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QD 348
            M + L K GP+S+ +N++ +  Y G         C+P DL H VL+VGYG         
Sbjct: 780 KMAQWLIKNGPISIGINANAMQFYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHK 839

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +PYW+++NSWG    + G++++ RG+  CG+  +A  A +
Sbjct: 840 KLPYWIIKNSWGSRWGENGYYRVYRGDGTCGVNAMASSAIV 880


>gi|339244639|ref|XP_003378245.1| cathepsin F [Trichinella spiralis]
 gi|316972864|gb|EFV56510.1| cathepsin F [Trichinella spiralis]
          Length = 366

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 157/339 (46%), Gaps = 50/339 (14%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEI 116
           E FK F+V+  + Y  ++   E++  FK         Q+  +    YG + F+D +PEE 
Sbjct: 64  ENFKQFMVEFNKWYETEKLTAEKYNIFKSNMVIAKRLQEEEQGTAIYGPTIFADMTPEEF 123

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                     +T+     +  K  K +  + K   + +  DWRK N      DQ  CGSC
Sbjct: 124 ---------RKTHLNFNPNNVKKPKRMANIPKSN-ISERMDWRKFNAVTSVKDQGNCGSC 173

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAF                            +EG +A+KT +L+  S+ QLV+C +   G
Sbjct: 174 WAFCTVAN-----------------------IEGAWAVKTAQLISLSEQQLVDCDRLDDG 210

Query: 237 CDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G       +E     GLE E+DY Y   +G   KC ++ +K  ++     +     + 
Sbjct: 211 CEGGLPVNAYLEIIRLGGLEKEEDYKYTARSG---KCKFNHTKSAVYINDTVVLPEDEDA 267

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI----P 351
           + + + + GP++V LN+D +  Y       +   CSP  + H V +VGY  ++++    P
Sbjct: 268 IARYVSENGPVAVGLNADAMMFYRSGIAHPSRLMCSPDGINHGVTIVGYDVKESLFWSTP 327

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           YW+++NSWGP   ++G++ + RG   CGI+Q+A    ID
Sbjct: 328 YWIIKNSWGPNWGEKGYYYLYRGKGVCGIDQMASSVVID 366


>gi|289740839|gb|ADD19167.1| cysteine proteinase cathepsin F [Glossina morsitans morsitans]
          Length = 471

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 163/340 (47%), Gaps = 53/340 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 118
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG +A++TG L ++S+ +L++C    S C+
Sbjct: 277 FSVTGN-----------------------IEGLHAVRTGVLEQYSEQELLDCDTSDSACN 313

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + E   +  GLE E DYPY   +  K +C ++ +K+ +   K  +    +ET +
Sbjct: 314 GGLPDNAYEAIEKIGGLELESDYPY---HARKDQCHFNSTKIHVKV-KGHVDLPKNETAI 369

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
            + L   GP+S+ +N++ +  Y G         CS  +L H VL+VGYG  D       +
Sbjct: 370 AQWLIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYGVSDYPMFKKTL 429

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWG    ++G++++ RG+N CG+ +++  A +D
Sbjct: 430 PYWIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSSAVLD 469


>gi|358339045|dbj|GAA32724.2| cathepsin F, partial [Clonorchis sinensis]
          Length = 271

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 141/298 (47%), Gaps = 36/298 (12%)

Query: 94  QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
           Q+  +   +YG ++FSD + EE   KT +         +  D    E + M+ EK     
Sbjct: 9   QEMEQGTAQYGVTQFSDLTSEEF--KTRYLRMRFDGPIVSEDLTPEEDVTMDNEK----- 61

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+    GP  DQ  CGSCWAFS+ G                        +EGQ+ 
Sbjct: 62  --FDWREHGAVGPVLDQGKCGSCWAFSVIGN-----------------------VEGQWF 96

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKC 272
            KTG L+  S+ QLV+C     GC+G +   +  E     GLE   DYPY   +G    C
Sbjct: 97  RKTGDLLALSEQQLVDCDHLDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVDG---IC 153

Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
             ++SK   +     +     +   + L + GPLS  LN+ L+  Y G  I      C+P
Sbjct: 154 YMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNP 213

Query: 333 YDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           + L HAVL VGYG +  IPYW+V+NSWG    ++G+F+I RG   CGI  +   A ID
Sbjct: 214 HGLNHAVLTVGYGTEFGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVSTAIID 271


>gi|344295816|ref|XP_003419606.1| PREDICTED: cathepsin F [Loxodonta africana]
          Length = 473

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 152/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F+    R Y   EE K R   F  +  +  +         +YG ++FSD + E
Sbjct: 172 MASIFKNFVTTYNRTYETKEETKWRMSVFANNMIRAQKLQALDQGTAQYGITKFSDLTEE 231

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +   +  +KM +     GPVP  WDWR K       DQ  CG
Sbjct: 232 EF---------RTIYLNPLLREDPGQKMRLGKAPKGPVPPDWDWRTKGAVTKVKDQGMCG 282

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 283 SCWAFSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVD 319

Query: 235 SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+      GLE+E+DY Y   +G    C++   K K++         
Sbjct: 320 KACMGGV--PSNAYSAIKTLGGLETEEDYSY---HGHLQACSFSAEKAKVYINDSVELSQ 374

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
               +   L K GP+SV +N+  +  Y           CSP+ + HAVL+VGYG + ++P
Sbjct: 375 NEYKLAAWLAKNGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSDVP 434

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 435 FWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVD 473


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 158/350 (45%), Gaps = 71/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   RF  F+ +    K H +      +G ++FSD +PE
Sbjct: 39  NAEHHFTTFKTKFGKSYATQEEHDYRFGVFRANLRRAKLHAKLDPSAEHGVTKFSDLTPE 98

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E          +R Y  +   R         +     +P+ +DWR K    P  +Q +CG
Sbjct: 99  EF---------KRQYLGLKPLRLPSTANKAPILPTSDLPENFDWRDKGAVTPVKNQGSCG 149

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS  G                        LEG + + TG+LV  S+ QLV+C   C
Sbjct: 150 SCWAFSTTG-----------------------ALEGAHYLSTGELVSLSEQQLVDCDHVC 186

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    +GC+G     + +Y  QAG +++EKDYPY   +G    C +DKSKV     
Sbjct: 187 DPEEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPY---SGRDETCKFDKSKVAATVA 243

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K+GPL+V +N+  +  Y G           PY    +L H VL
Sbjct: 244 NFSVVSLDEDQIAANLVKHGPLAVGINAIFMQTYIGG-------VSCPYICGKNLDHGVL 296

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG          + P+W+++NSWG    ++G++KI RG N CG++ +
Sbjct: 297 LVGYGAAGYAPIRFKDKPFWIIKNSWGESWGEDGYYKICRGKNVCGVDSM 346


>gi|357619726|gb|EHJ72185.1| cathepsin [Danaus plexippus]
          Length = 1118

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/322 (34%), Positives = 162/322 (50%), Gaps = 49/322 (15%)

Query: 68   FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEEIL-C 118
            F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S +E +  
Sbjct: 819  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKDEFVKF 877

Query: 119  KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
             TG K  E          E  +K  +    +   PD +DWRKK V      Q  C SCWA
Sbjct: 878  YTGLKREES------PSNEDHKKTDLPKSFNVTAPDQFDWRKKGVVSSVKFQGHCVSCWA 931

Query: 179  FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
            FS+AG                        +E   AIKTGKL++ S+ QLV+C +   GC 
Sbjct: 932  FSVAGN-----------------------VESINAIKTGKLIDVSEQQLVDCDEWNFGCS 968

Query: 239  GCFF--EPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SE 294
            G     +    Y H+ G  S + YPY    G+   C Y+ SKV +   KD+ +F     +
Sbjct: 969  GGIACSKSHFSYFHKKGAMSLESYPYVGKEGQ---CRYNSSKV-VIRLKDYQYFIALSED 1024

Query: 295  TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
             +K+ LY  GPLS+ ++S  IH Y G  + K  E        HAVLLVGYGK++ + YW+
Sbjct: 1025 EIKEYLYNIGPLSIDIDSSQIHHYKGGIVIK--ECQEVKKTNHAVLLVGYGKENGVEYWI 1082

Query: 355  VRNSWGPIGPDEGFFKIERGNN 376
            V+NSWG    ++G+F+I+RG N
Sbjct: 1083 VKNSWGQNWGEKGYFRIQRGVN 1104



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 140/277 (50%), Gaps = 38/277 (13%)

Query: 103 YGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           YG ++FSD S EE +   TG K  E          E  +K  +    +   PD +DWRKK
Sbjct: 10  YGINKFSDLSKEEFVKYYTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKK 63

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
            V     +Q  CGSCWAFS A                         +E  +AIKTGKL++
Sbjct: 64  GVVSSIKNQKHCGSCWAFSAAAN-----------------------VESIHAIKTGKLID 100

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            S+ QL++C K  SGC G     ++ Y    G  S K YPY    G   KC YD SKV++
Sbjct: 101 VSEQQLLDCDKYDSGCSGGLPWDALRYFVANGAMSLKSYPYVAKEG---KCRYDSSKVEI 157

Query: 282 FTGKDFLHFN--GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              K++ H      + +K+ LY  GPLS+ + S  +  YNG  +   +E    Y + HAV
Sbjct: 158 RL-KEYKHKEKLSEDQIKEHLYNIGPLSIAITSSPLASYNGGILI--EECHRSYLINHAV 214

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 376
           LLVGYGK++ + YW+V+NSWG    + G+F+++ G N
Sbjct: 215 LLVGYGKENGVKYWIVKNSWGQNWGENGYFRMKMGVN 251



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/308 (36%), Positives = 150/308 (48%), Gaps = 49/308 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILC 118
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE I  
Sbjct: 519 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 577

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG K  E          E  +K  +    +   PD +DWRKK V     +Q  CGSCWA
Sbjct: 578 YTGLKREES------PSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWA 631

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS AG                        +E  +AIKTGKLV  S+ QLV+C  Q SGC 
Sbjct: 632 FSAAGN-----------------------VESIHAIKTGKLVHVSEQQLVDCDSQDSGCS 668

Query: 239 GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETM 296
           G     ++ Y    G  S K YPY   N     C YD +KV +   KD+ H      + +
Sbjct: 669 GGLTWNAMRYFRTNGAVSLKSYPYVAQNE---NCRYDSNKV-VIRLKDYKHITQLSEDQI 724

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL-GHAVLLVGYGKQDNIPYWLV 355
           K+ LY  G LS+ + S  +  Y G  +    E C   DL  HAVLLV YGK++++ YW+V
Sbjct: 725 KEHLYNIGLLSIDITSTQLTWYEGGILI---EECRRSDLVDHAVLLVEYGKENSVEYWIV 781

Query: 356 RNSWGPIG 363
           +NSWG  G
Sbjct: 782 KNSWGQNG 789



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 85/187 (45%), Gaps = 51/187 (27%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---QDGHKKHER-----YGTSEFSDRSPEE-ILC 118
           F+ FI    ++Y ++ E +ERF+ F    +D +  +ER     YG ++FSD S EE I  
Sbjct: 302 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 360

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGP------VPDAWDWRKKNVTGPAGDQAA 172
            TG K            R++          D P       PD +DWRKK V     +Q  
Sbjct: 361 YTGLK------------RDRCTTTEHHKSTDLPKSFNITAPDQFDWRKKGVVSSVKNQRH 408

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS A                         +E  +AIKTGKL++ S+ QL++C K
Sbjct: 409 CGSCWAFSAAAN-----------------------VESIHAIKTGKLIDVSEQQLLDCDK 445

Query: 233 QCSGCDG 239
             SGC G
Sbjct: 446 YDSGCSG 452


>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior]
          Length = 774

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 52/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEILC 118
           F  F+    R Y++ E    RF+ F+++ +     ++ E+    YG + F+D S +E   
Sbjct: 470 FNNFMTTYNRTYSSLER-NLRFKIFRENLNFIEELRETEQGTGIYGVNMFADMSQKEFRT 528

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           +  G +   ++   I   + ++         D  +P ++DWR+K V  P  +Q  CGSCW
Sbjct: 529 RYLGLRPDLQSENEIPLPKAEI--------PDIDLPSSFDWRQKGVVTPVKNQGQCGSCW 580

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS+ G                        +EGQYAIK G+L+  S+ +LV+C     GC
Sbjct: 581 AFSVTGN-----------------------VEGQYAIKHGQLLSLSEQELVDCDHLDEGC 617

Query: 238 DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
           +G   + +     Q  GLE E DYPY+    E  KC + ++ VK+         +    +
Sbjct: 618 NGGLPDNAYRAIEQLGGLELESDYPYE---AENEKCHFKQNLVKVELASAVNITSNETQI 674

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QDNI 350
            + L + GP+++ +N++ +  Y G         C+P +L H VL+VGYG         N+
Sbjct: 675 AQWLVQNGPIAIGINANAMQFYMGGVSHPLKILCNPNNLNHGVLIVGYGTSRYPLFHKNL 734

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+++NSWG    ++G++++ RG+  CG+  +A  A +
Sbjct: 735 PYWIIKNSWGKSWGEQGYYRVYRGDGTCGLNTMASSAVV 773


>gi|427777627|gb|JAA54265.1| Putative cathepsin f-like cysteine protease [Rhipicephalus
           pulchellus]
          Length = 475

 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 180/382 (47%), Gaps = 59/382 (15%)

Query: 29  SCLCLPSLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKE 87
           +C    S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + 
Sbjct: 128 TCEAAMSIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEA 185

Query: 88  RFEYFKQDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVAD 135
           RF  FK +  +             YG +EFSD SP E          ER Y   ++ +A+
Sbjct: 186 RFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAE 236

Query: 136 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNH 195
            +   K +     + P+PD +DWR K       +Q  CGSCWAFS+ G            
Sbjct: 237 HKAEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTGN----------- 285

Query: 196 IDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGL 254
                       +EGQ+ +   KL+  S+ +LV+C     GC G +   +++      GL
Sbjct: 286 ------------VEGQWFLSRSKLLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGL 333

Query: 255 ESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 313
           E+E +YPYK  +G  +F     K++V+ F G   L  N +E +   L K+GP+S+ +N++
Sbjct: 334 ETESEYPYKGVDGTCEFNKTESKARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINAN 389

Query: 314 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEG 367
            +  Y G         CSP DL H VLLVG+G      ++  +PYW+V+NSWG    ++G
Sbjct: 390 AMQFYFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKG 449

Query: 368 FFKIERGNNACGIEQIAGYATI 389
           ++++ RG+  CG+ Q+A  A +
Sbjct: 450 YYRVYRGDGTCGVNQMALSAVV 471


>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max]
 gi|255639509|gb|ACU20049.1| unknown [Glycine max]
          Length = 366

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 158/359 (44%), Gaps = 71/359 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 114
           N    F AF  K G+ YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFGKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPA 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E           R +  +   R   +     +     +P  +DWR+        +Q +CG
Sbjct: 106 EF---------RRQFLGLKPLRLPSDAQKAPILPTNDLPTDFDWREHGAVTGVKNQGSCG 156

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 157 SCWSFSAVG-----------------------ALEGAHFLSTGELVSLSEQQLVDCDHEC 193

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT QAG L  EKDYPY     ++  C +DKSKV     
Sbjct: 194 DPEERGACDSGCNGGLMTTAFEYTLQAGGLMREKDYPYTGR--DRGPCKFDKSKVAASVA 251

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     E +   L + GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 252 NFSVVSLDEEQIAANLVQNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGVL 304

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 391
           LVGYG       +    PYW+++NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 305 LVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363


>gi|163914827|ref|NP_001106423.1| cathepsin F precursor [Xenopus (Silurana) tropicalis]
 gi|157423494|gb|AAI53364.1| LOC100127591 protein [Xenopus (Silurana) tropicalis]
          Length = 463

 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 45/336 (13%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSPEE 115
           L  FK F+    ++Y++ EE   R + F Q+  K             YG +++SD + +E
Sbjct: 163 LTLFKDFVTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYSDLTEDE 222

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                        Y   +   + + +M   +  +   PD WDWR         +Q  CGS
Sbjct: 223 F---------RSLYLNPLLSSKPLYQMKKAIVPNMSAPDQWDWRDHGAVTEVKNQGMCGS 273

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAFS+ G                        +EGQ+ +K G LV  S+ +LV+C     
Sbjct: 274 CWAFSVIGN-----------------------IEGQWFLKKGSLVSLSEQELVDCDGVDH 310

Query: 236 GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            C G     + E   +  G+E+E++Y Y+   G K  C++  SKV  +            
Sbjct: 311 ACAGGLPSNAYEAIEKLGGIETEQEYSYE---GHKNTCSFSTSKVSAYINSSVEIPKDEN 367

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            +   L + GP+S+ LN+  +  Y           C+P+ + HAVLLVGYG+++  P+W 
Sbjct: 368 EIAAWLAQNGPISIALNAFAMQFYRKGISHPFRILCNPWMIDHAVLLVGYGERNGTPFWA 427

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           ++NSWG    ++G++ + RG  ACG+  +   A +D
Sbjct: 428 IKNSWGTDWGEQGYYYLYRGTGACGMNTMCSSAVVD 463


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 166/354 (46%), Gaps = 57/354 (16%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHERYG- 104
           +A+  SL   ++ + ETFK   V+ G+ Y N  E  +RF  F+ +      H      G 
Sbjct: 12  VAVNASLIEKHQALFETFK---VENGKSYRNQVEEVQRFNIFRANVLEIEQHNALYEQGL 68

Query: 105 ------TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 158
                  ++F+D + EE     G          I  + + +E           VP + DW
Sbjct: 69  VSYKKAINQFTDLTQEEFKAYLGLHVKPVLNNTIQYELKGLE-----------VPTSVDW 117

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R         +Q +CGSCW+F++ G                         EG Y  K  +
Sbjct: 118 RSAGQVTGVKNQGSCGSCWSFALTGS-----------------------TEGAYYRKHKQ 154

Query: 219 LVEFSKSQLVECAKQCS-GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS 277
           LV  S+ QLV+C+   + GC+G F + +  Y  Q GL++E  YPY   +G    C YD S
Sbjct: 155 LVSLSEQQLVDCSTSINYGCNGGFLDATFPYIEQYGLQTESSYPYTGVDG---SCKYDSS 211

Query: 278 KVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
           KV +    +++  +GSE+ + + +   GP+++ +++  +  Y+      N   C+  +L 
Sbjct: 212 KV-VTKISNYVSLHGSESKVLEPVGSIGPVAITMDASYLSSYSSGIYAANK--CTTTNLN 268

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           HAVL+VGYG Q+   YW+V+NSWG    ++G+F++ RG+N CG  Q   Y  I+
Sbjct: 269 HAVLVVGYGSQNGQNYWIVKNSWGSGWGEQGYFRLLRGSNECGCAQDPVYPNIN 322


>gi|296218871|ref|XP_002755611.1| PREDICTED: cathepsin F [Callithrix jacchus]
          Length = 489

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 168/378 (44%), Gaps = 53/378 (14%)

Query: 26  GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEE 84
           G  S L  P L +R  ++  + V +L  E  L  D    +   F+ F++   R Y + EE
Sbjct: 152 GTISSLSQPRLDNR--NETFSPVFSLLNEDPLPQDLAVKMASIFRNFVITYNRTYESKEE 209

Query: 85  IKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 135
            + R   F  +  +  +         +YG ++FSD + EE           RT       
Sbjct: 210 AQWRLSVFVHNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF----------RTTYLNPLL 259

Query: 136 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNH 195
           RE  +KM          P  WDWR K       DQ  CGSCWAFS+ G            
Sbjct: 260 REPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN----------- 308

Query: 196 IDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQA 252
                       +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  
Sbjct: 309 ------------VEGQWFLNQGTLLSLSEQELLDCDKIDKACMGGL--PSSAYSAIKNLG 354

Query: 253 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 312
           GLE+E DY Y+   G    C +   K K++           + +   L K GP+SV +N+
Sbjct: 355 GLETEDDYSYR---GHMQACNFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINA 411

Query: 313 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 372
             +  Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + 
Sbjct: 412 FGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLH 471

Query: 373 RGNNACGIEQIAGYATID 390
           RG+ ACG+  +A  A +D
Sbjct: 472 RGSGACGVNTMASSAVVD 489


>gi|90592736|ref|YP_529689.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
 gi|71559186|gb|AAZ38185.1| VCATH [Agrotis segetum nucleopolyhedrovirus]
          Length = 343

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 179/374 (47%), Gaps = 55/374 (14%)

Query: 31  LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 90
           L + +L +   +++V    T A + SL ++  +  + F+ FI +  +QY N+ E + RF 
Sbjct: 9   LVVNALLNWRDNELVDAAGTAANKPSL-YNINSAPQYFEQFISQYNKQYKNEAEKRHRFN 67

Query: 91  YFK---QDGHKKHER-----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM 142
            F    ++ ++K+ R     Y  + F+D +  E++ +         +  + +  E     
Sbjct: 68  IFMHNIEEINQKNSRNDSAVYKINRFADMTKNEVVIR---------HTGLASIGELNSNF 118

Query: 143 LMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
              V  DGP     P ++DWR  N      DQ+ CG+CWAF+  G               
Sbjct: 119 CETVVVDGPGQRQRPSSFDWRTYNKVTSVKDQSMCGACWAFASLGA-------------- 164

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESE 257
                    LE QYAIK  +L++ ++ QLV+C     GCDG     + E   Q  G+E E
Sbjct: 165 ---------LESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMQMGGVEQE 215

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIH 316
            DYPY+    E+  CA    K      K F +     E ++ +L   GP+++ +++  + 
Sbjct: 216 FDYPYR---AERQPCALKPHKFAAGVRKCFRYVLRNEERLEDLLRHVGPIAIAVDAVDLT 272

Query: 317 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 376
           DY G  +      C    L HAVLLVGYG ++N+P+W ++NSWG    ++G+ ++ RG N
Sbjct: 273 DYYGGIV----SFCENNGLNHAVLLVGYGVENNVPFWTLKNSWGSDYGEDGYVRVRRGVN 328

Query: 377 ACG-IEQIAGYATI 389
           +CG + ++A  A +
Sbjct: 329 SCGLVNELASSAQV 342


>gi|343412462|emb|CCD21670.1| cysteine peptidase (CP), putative [Trypanosoma vivax Y486]
          Length = 367

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 153/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSE 294
              + + E+    +   + +EK YPY +  GE+  C     KV    TG  D  H    +
Sbjct: 184 GLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332


>gi|19851|emb|CAA78365.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 365

 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 175/395 (44%), Gaps = 88/395 (22%)

Query: 28  ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEE 84
           +S +  P   D +  QVV+  +T         D+ ++L     F  F  K G+ YA++EE
Sbjct: 16  SSAIAFPD-EDPLIRQVVSETET---------DDSHLLNAEHHFSLFKSKFGKIYASEEE 65

Query: 85  IKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADR 136
              RF+ FK +  +            +G ++FSD +P E           RTY  +   +
Sbjct: 66  HDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPK 116

Query: 137 EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHI 196
            KV      +     +P  +DWR         +Q +CGSCW+FS  G             
Sbjct: 117 PKVNAEKAPILPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTG------------- 163

Query: 197 DQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIE 247
                      +EG + + TG+LV  S+ QLV+C  +C         +GC G     + E
Sbjct: 164 ----------AVEGAHFLATGELVSLSEQQLVDCDHECDSEQQDSCDAGCGGGLMTTAFE 213

Query: 248 YTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPL 306
           YT +AG L+ EKDYPY   +G   KC +DKSK+        +     + +   L K+GPL
Sbjct: 214 YTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPL 270

Query: 307 SVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDNIP-------YW 353
           +V +N+  +  Y G    P+   ++ D         H VLLVGYG     P       YW
Sbjct: 271 AVGINAAWMQTYVGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYW 321

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           +++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 322 IIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 356


>gi|9630063|ref|NP_046281.1| cathepsin [Orgyia pseudotsugata MNPV]
 gi|2499880|sp|O10364.1|CATV_NPVOP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|7435821|pir||T10394 cathepsin - Orgyia pseudotsugata nuclear polyhedrosis virus
 gi|1911371|gb|AAC59124.1| cathepsin [Orgyia pseudotsugata MNPV]
          Length = 324

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 169/338 (50%), Gaps = 57/338 (16%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFS 109
           T+D       F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FS
Sbjct: 18  TYDLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFS 77

Query: 110 DRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           D S EE + K TG     +T    E ++ DR             GP+   +DWR+ N   
Sbjct: 78  DLSKEEAISKYTGLSLPHQTQNFCEVVILDRPP---------DRGPLE--FDWRQFNKVT 126

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
              +Q  CG+CWAF+  G                        LE Q+AIK  +L+  S+ 
Sbjct: 127 SVKNQGVCGACWAFATLGS-----------------------LESQFAIKYNRLINLSEQ 163

Query: 226 QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSK--VKLF 282
           Q ++C +  +GCDG     + E   +  G++ E DYPY+ ANG+   C  + ++  V + 
Sbjct: 164 QFIDCDRVNAGCDGGLLHTAFESAMEMGGVQMESDYPYETANGQ---CRINPNRFVVGVR 220

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           + + ++     E +K +L   GP+ V +++  I +Y    +R+    C+ + L HAVLLV
Sbjct: 221 SCRRYIVM-FEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ----CANHGLNHAVLLV 275

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           GY  ++NIPYW+++N+WG    ++G+F++++  NACGI
Sbjct: 276 GYAVENNIPYWILKNTWGTDWGEDGYFRVQQNINACGI 313


>gi|340053966|emb|CCC48259.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 447

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 154/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 26  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 83

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ +CGSCW+F
Sbjct: 84  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGSCGSCWSF 138

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 139 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGG 175

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSE 294
            F + + E+    +   + +EK YPY + +G K  C  Y        TG  D  H    +
Sbjct: 176 GFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DED 233

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 234 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 289

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 290 IKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 324


>gi|397517049|ref|XP_003828732.1| PREDICTED: cathepsin F [Pan paniscus]
          Length = 379

 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 152/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 138 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 188

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 189 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 225

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++     +   
Sbjct: 226 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQ 280

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 281 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 340

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 341 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 379


>gi|427778331|gb|JAA54617.1| Putative cysteine proteinase cathepsin f [Rhipicephalus pulchellus]
          Length = 361

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 180/376 (47%), Gaps = 41/376 (10%)

Query: 35  SLTDRITDQVVARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK 93
           S+  RI+  +  +  T A +   L    E  L  F  F     + Y + EE + RF  FK
Sbjct: 2   SIVTRISGVLDPKDLTFAYLSKHLKLSQERSL--FSVFARTYNKTYKDKEEHEARFMIFK 59

Query: 94  QDGHK---------KHERYGTSEFSDRSPEEILCKTGFKWSERTY---ERIVADREKVEK 141
            +  +             YG +EFSD SP E          ER Y   ++ +A+ +   K
Sbjct: 60  NNLKRIALFNRLEEGTAHYGLTEFSDLSPSEF---------ERHYLGLKKDLAEHKAEVK 110

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
            +     + P+PD +DWR K       +Q  CGSCWAFS   +  N  +           
Sbjct: 111 PIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXTEVKNQGM-----CGSCWA 165

Query: 202 LIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDY 260
               G +EGQ+ +   KL+  S+ +LV+C     GC G +   +++      GLE+E +Y
Sbjct: 166 FSVTGNVEGQWFLSRSKLLSLSEQELVDCDHGDHGCKGGYMGQAMKAVIEMGGLETESEY 225

Query: 261 PYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 319
           PYK  +G  +F     K++V+ F G   L  N +E +   L K+GP+S+ +N++ +  Y 
Sbjct: 226 PYKGVDGTCEFNKTESKARVQSFVG---LPQNETE-LAYWLMKHGPVSIGINANAMQFYF 281

Query: 320 GTPIRKNDETCSPYDLGHAVLLVGYG------KQDNIPYWLVRNSWGPIGPDEGFFKIER 373
           G         CSP DL H VLLVG+G      ++  +PYW+V+NSWG    ++G++++ R
Sbjct: 282 GGISHPWKFLCSPTDLDHGVLLVGFGVDKRSFRRKPVPYWIVKNSWGKYWGEKGYYRVYR 341

Query: 374 GNNACGIEQIAGYATI 389
           G+  CG+ Q+A  A +
Sbjct: 342 GDGTCGVNQMALSAVV 357


>gi|297801998|ref|XP_002868883.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314719|gb|EFH45142.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 156/353 (44%), Gaps = 69/353 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 119
           F  F  K G+ YA++EE   RF  FK +  +  +H+      R+G ++FSD +  E   K
Sbjct: 51  FSLFKSKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 110

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRAGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 162

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 163 SATG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEA 199

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT    GL  E+DYPY   +G+   C  DKSK+        + 
Sbjct: 200 GSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKT--CKLDKSKIVASVSNFSVI 257

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               E +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 258 SIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVLLVGYG 310

Query: 346 KQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                       PYW+++NSWG    + GF+KI +G N CG++ +    T  V
Sbjct: 311 SAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSLVSTVTAAV 363


>gi|380025691|ref|XP_003696602.1| PREDICTED: putative cysteine proteinase CG12163-like [Apis florea]
          Length = 881

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 165/341 (48%), Gaps = 55/341 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           F+ FI+K  + +++  E + RF+ FKQ+     E          YG + F+D +P+E   
Sbjct: 576 FEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIIKELQTFEQGTAEYGVTMFADLTPKEFKT 635

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           +  GF+   +    I   + +V  + +        P  +DWR  N   P  DQ  CGSCW
Sbjct: 636 RYLGFRPELKQENEIPLAKIEVSDIFL--------PPKFDWRDYNAVTPVKDQGLCGSCW 687

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS+ G                        +EGQYAIK  KL+  S+ +L++C     GC
Sbjct: 688 AFSVTGN-----------------------VEGQYAIKYKKLLSLSEQELLDCDTLDEGC 724

Query: 238 DGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSET 295
           +G + E + +   +  GLE E DYPY   +G   KC + K   K+   G   ++   +ET
Sbjct: 725 NGGYMENAYKAIEKLGGLELESDYPY---DGRNEKCHFFKKNAKVQVVGA--VNITSNET 779

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------QD 348
            M + L K GP+S+ +N++ +  Y G         C+P DL H VL+VGYG         
Sbjct: 780 KMAQWLIKNGPISIGINANAMQFYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKYPLFHK 839

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +PYW+++NSWG    + G++++ RG+  CG+  +A  A +
Sbjct: 840 ELPYWIIKNSWGSRWGENGYYRVYRGDGTCGVNAMASSAIV 880


>gi|3916212|gb|AAC78838.1| cathepsin F [Homo sapiens]
          Length = 338

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 148 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 184

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 185 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 239

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 240 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 299

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 300 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 338


>gi|28192375|gb|AAK07731.1| CPR2-like cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 87/406 (21%)

Query: 18  IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 74  KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 125
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANRRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 126 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKF 185
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G  
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTG-- 161

Query: 186 SNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 236
                                 +EG + + TG+LV  S+ QLV+C  +C         +G
Sbjct: 162 ---------------------AVEGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAG 200

Query: 237 CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C G     + EYT +AG L+ EKDYPY   +G   KC +DKSK+        +     + 
Sbjct: 201 CGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQ 257

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDN 349
           +   L K+GPL+V +N+  +  Y G    P+   ++ D         H VLLVGYG    
Sbjct: 258 IAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HGVLLVGYGSHGF 308

Query: 350 IP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 309 APIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|30575716|gb|AAP33050.1| cysteine proteinase 3 [Clonorchis sinensis]
 gi|358339353|dbj|GAA47433.1| cathepsin F [Clonorchis sinensis]
          Length = 327

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 46/349 (13%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 101
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  DQ  CGSCWAFS  G                        +EGQ+  KT  L++
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGN-----------------------IEGQWFRKTDNLLQ 160

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK
Sbjct: 161 LSEQQLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVK 217

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
           ++     +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL
Sbjct: 218 VYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVL 277

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 278 TVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326


>gi|54696066|gb|AAV38405.1| cathepsin F [synthetic construct]
          Length = 485

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 162/363 (44%), Gaps = 50/363 (13%)

Query: 42  DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 100
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 101 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P  WDWR K       DQ  CGSCWAFS+ G                        +EGQ
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN-----------------------VEGQ 307

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G 
Sbjct: 308 WFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GH 362

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C +   K K++           + +   L K GP+SV +N+  +  Y     R    
Sbjct: 363 MQSCNFSAEKAKVYINDSMELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRP 422

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A 
Sbjct: 423 LCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 482

Query: 389 IDV 391
           +D+
Sbjct: 483 VDL 485


>gi|42407296|dbj|BAD10859.1| cysteine protease [Aster tripolium]
          Length = 363

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 170/373 (45%), Gaps = 67/373 (17%)

Query: 37  TDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD- 95
           +D +  QVV   D   IE     D E+    FK F  K GR Y  +EE + R   FK + 
Sbjct: 23  SDPLIRQVVQN-DETEIESDPLLDPEH---HFKLFKNKFGRTYDTEEEHEYRLTVFKSNL 78

Query: 96  -GHKKHE------RYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVE 147
              K+H+      ++G ++FSD +P E   K  G K    +  ++ AD  K       + 
Sbjct: 79  RRAKRHQVLDPTAKHGVTKFSDLTPSEFRKKYLGLK----SKLKLPADANKAP-----IL 129

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P  +DWR K    P  +Q +CGSCW+FS  G                        
Sbjct: 130 PTSNLPQDFDWRDKGAVTPVKNQGSCGSCWSFSTTG-----------------------A 166

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           LEG + ++TG+LV  S+ QLV+C  +C         SGC+G     + EY  +AG L+ E
Sbjct: 167 LEGSHFLQTGELVSLSEQQLVDCDHECDPAEYNSCDSGCNGGLMNNAFEYILKAGGLQKE 226

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
            DYPY   +G    C +DKSK+        +     + +   L   GPL++ +N+  +  
Sbjct: 227 ADYPYTGRDG---TCKFDKSKIAASVANFSVVSTDEDQIAANLVTNGPLAIGINAAWMQT 283

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFK 370
           Y G         CS   + H VLLVGYG            PYW+++NSWG    ++G++K
Sbjct: 284 YIGQ--VSCPYICSKTKMDHGVLLVGYGSAGYAPLRFKEKPYWIIKNSWGEDWGEDGYYK 341

Query: 371 IERGNNACGIEQI 383
           +  G NACG++ +
Sbjct: 342 LCSGYNACGMDTM 354


>gi|5051468|emb|CAB44983.1| putative preprocysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 184/406 (45%), Gaps = 87/406 (21%)

Query: 18  IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 74  KRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCKTGFKWS 125
           K G+ YA++EE   RF+ FK +  +  +H+       +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARRHQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 126 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKF 185
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G  
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTG-- 161

Query: 186 SNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 236
                                 +EG + + TG+LV  S+ QLV+C  +C         +G
Sbjct: 162 ---------------------AVEGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAG 200

Query: 237 CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C G     + EYT +AG L+ EKDYPY   +G   KC +DKSK+        +     + 
Sbjct: 201 CGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKIAAAVTNFSVIGLDEDQ 257

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDN 349
           +   L K+GPL+V +N+  +  Y G    P+   ++ D         H VLLVGYG    
Sbjct: 258 IAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HGVLLVGYGSHGF 308

Query: 350 IP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 309 APIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|324514421|gb|ADY45863.1| Viral cathepsin [Ascaris suum]
          Length = 399

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 182/382 (47%), Gaps = 44/382 (11%)

Query: 10  LEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDT-LAIEGSLTFDNENILETF 68
           L +K I +   +FLL G A+ L         +D     ++T LA  G L+ D    +++F
Sbjct: 42  LSRKGITISILLFLLVGCATMLIAREFLS--SDPSAGSLETILADMGELSNDYPIYIDSF 99

Query: 69  KAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKT 120
             F+ +  RQY++++E + RF  F ++    KK ++      +G + F+D S  E+   T
Sbjct: 100 VKFMQEYDRQYSSNDETRLRFRNFVRNMKFIKKAQKGRDNVVFGITRFTDWSEAEMKSMT 159

Query: 121 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
              W+       V     ++    E ++    PDA+DWR K+V     DQ  CGSCWAF+
Sbjct: 160 CEDWAANE----VGSEITLDDDQDESDEVFDRPDAFDWRTKSVVTDIKDQERCGSCWAFA 215

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 240
             G                       ++E   AI    L+  S+ +L++C    +GC G 
Sbjct: 216 AIG-----------------------VVESMNAIAKNPLISLSEQELIDCDTDDNGCSGG 252

Query: 241 FFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 300
           +   +  Y  + G+ SEKDYPYK    E+ +CA + ++V + + K ++  N  + M   +
Sbjct: 253 YRPYAFRYVRRHGIVSEKDYPYKGK--EQSQCAANGTRVYIKSVK-YIGRN-EDAMADFV 308

Query: 301 YKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 358
           +  GP+SV +N   +  H  +G    K ++        HAV +VGYG Q+   YWL++NS
Sbjct: 309 FYRGPISVGINVTKEFFHYRSGVFTPKKEDCEEDSQGSHAVAVVGYGSQNGEDYWLIKNS 368

Query: 359 WGPIGPDEGFFKIERGNNACGI 380
           WG     +G+   +RG N CGI
Sbjct: 369 WGKKWGMDGYVLYKRGENCCGI 390


>gi|119594953|gb|EAW74547.1| cathepsin F, isoform CRA_a [Homo sapiens]
 gi|119594954|gb|EAW74548.1| cathepsin F, isoform CRA_a [Homo sapiens]
          Length = 392

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 91  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 150

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 151 EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 201

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 202 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 238

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 239 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 293

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 294 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 353

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 354 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 392


>gi|311247276|ref|XP_003122571.1| PREDICTED: cathepsin W-like [Sus scrofa]
          Length = 367

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 159/351 (45%), Gaps = 61/351 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E F  F ++  R Y+N  E   R + F Q+  K             +G + FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSNPAEHARRLDIFAQNLAKAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGPVPDAWDWRKK-NVTGPAGDQAA 172
               G  W             K   M ++V   E    VP + DWRKK  V      Q  
Sbjct: 100 GQLHGHHWGA----------GKAPSMGIKVGSEESGETVPQSCDWRKKPGVISAIKHQKD 149

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           C  CWA +               +D          +E Q+AIK  + V+ S  Q+++C +
Sbjct: 150 CNCCWAMAA--------------VDN---------VEAQWAIKYHQAVQLSVQQVLDCDR 186

Query: 233 QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             +GC+G F ++  +   + +GL SE+DYPYK         A    KV     +DFL   
Sbjct: 187 CGNGCNGGFVWDAFLTVLNTSGLASEQDYPYKGTVKTHRCLAKQHRKVAWI--QDFLMLQ 244

Query: 292 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ--- 347
             E ++ + L   GP++V +N+ L+  Y    IR    TC P+ + H+VLLVG+GK    
Sbjct: 245 FCEQSIARYLATEGPITVTINAGLLQQYKRGVIRATPATCDPHLVNHSVLLVGFGKSKSV 304

Query: 348 --------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                    +IPYW+++NSWGP   +EG+F++ RG+N CGI +    A +D
Sbjct: 305 EGRRPRPGHSIPYWILKNSWGPDWGEEGYFRLHRGSNTCGITKYPVTARVD 355


>gi|3916214|gb|AAC78839.1| cathepsin F [Homo sapiens]
          Length = 302

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 151/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 1   MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 60

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 61  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 111

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 112 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 148

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 149 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 203

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 204 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 263

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 264 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 302


>gi|22549430|ref|NP_689203.1| cath gene product [Mamestra configurata NPV-B]
 gi|215401259|ref|YP_002332563.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|22476609|gb|AAM95015.1| putative cysteine proteinase [Mamestra configurata NPV-B]
 gi|198448759|gb|ACH88549.1| cathepsin [Helicoverpa armigera multiple nucleopolyhedrovirus]
 gi|390165231|gb|AFL64878.1| cathepsin [Mamestra brassicae MNPV]
 gi|401665635|gb|AFP95747.1| putative cysteine proteinase [Mamestra brassicae MNPV]
          Length = 341

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 161/338 (47%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 119
           F+ FI +  +QY++++E K R+  F+ +    + K+ R     Y  + F+D +  E++ +
Sbjct: 44  FEKFITQYNKQYSSEDEKKYRYNIFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNR 103

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  +        +  DGP     P  +DWR  N      DQ  CG
Sbjct: 104 HTG-----------LASGDTGANFCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCG 152

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CWAF  AG                      G LE QYAIK  +L++ ++ QLV+C    
Sbjct: 153 ACWAF--AGL---------------------GALESQYAIKYDRLIDLAEQQLVDCDFVD 189

Query: 235 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E   H  G+E E DYPYK     +  CA    K  +     + +    
Sbjct: 190 MGCDGGLIHTAYEQIMHIGGVEQEYDYPYK---AVRLPCAVKPHKFAVGVRNCYRYVLLS 246

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  + DY G  I      C    L HAVLLVGYG ++N+PY
Sbjct: 247 EERLEDLLRHVGPIAIAVDAVDLTDYYGGVI----SFCENNGLNHAVLLVGYGVENNVPY 302

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W ++NSWGP   + G+ +I RG N+CG I ++A  A I
Sbjct: 303 WTIKNSWGPDYGENGYVRIRRGVNSCGMINELASSAQI 340


>gi|116242322|gb|ABJ89818.1| cysteine proteinase 3 [Clonorchis sinensis]
          Length = 327

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 46/349 (13%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 101
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  DQ  CGSCWAFS  G                        +EGQ+  KT  L++
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGN-----------------------IEGQWFRKTDNLLQ 160

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C     GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK
Sbjct: 161 LSEQQLLDCDGVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVK 217

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
           ++     +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL
Sbjct: 218 VYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVL 277

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 278 TVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 326


>gi|118429521|gb|ABK91808.1| cysteine proteinase prozyme precursor [Clonorchis sinensis]
          Length = 316

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 46/349 (13%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 101
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 3   FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 61

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 62  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 112

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  DQ  CGSCWAFS  G                        +EGQ+  KT  L++
Sbjct: 113 GAVGPVLDQGDCGSCWAFSAVGN-----------------------IEGQWFRKTDNLLQ 149

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK
Sbjct: 150 LSEQQLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVK 206

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
           ++     +     +   ++L + GPLS  LN+  +  Y    +      C    L HAVL
Sbjct: 207 VYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQFYTEGILHPLPALCDAQSLNHAVL 266

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 267 TVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 315


>gi|41019551|tpe|CAD66657.1| TPA: putative cysteine proteinase precursor [Hordeum vulgare subsp.
           vulgare]
 gi|326489967|dbj|BAJ94057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525847|dbj|BAJ93100.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 164/370 (44%), Gaps = 81/370 (21%)

Query: 53  IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RY 103
           + G+   DN+  L++ F  F+ + G+ Y + EE   R   FK +    ++H+       +
Sbjct: 37  VGGADPLDNDLELDSQFVGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQLLDPSAEH 96

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWD 157
           G ++FSD +P E           RTY  +   R    + +     D PV      P+ +D
Sbjct: 97  GVTKFSDLTPAEF---------RRTYLGLKTTRRSFLREMAGSAHDAPVLPTDGLPEDFD 147

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR     GP  +Q +CGSCW+FS +                       G LEG   + +G
Sbjct: 148 WRDHGAVGPVKNQGSCGSCWSFSAS-----------------------GALEGANYLASG 184

Query: 218 KLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANG 267
           K+   S+ QLV+C  +C         +GC+G     +  Y     GLE EKDYPY   +G
Sbjct: 185 KMEVLSEQQLVDCDHECDPSEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG 244

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
               C +DKSK+        +     E +   L KYGPL++ +N+  +  Y G       
Sbjct: 245 ---TCKFDKSKIAASVQNYSVVAVDEEQIAANLVKYGPLAIGINAAYMQTYIGG------ 295

Query: 328 ETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNN 376
               PY     L H VLLVGYG            PYW+++NSWG    D+G++KI RG+N
Sbjct: 296 -VSCPYICGRHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSN 354

Query: 377 A---CGIEQI 383
               CG++ +
Sbjct: 355 VRNKCGVDSM 364


>gi|403293601|ref|XP_003937801.1| PREDICTED: cathepsin F [Saimiri boliviensis boliviensis]
          Length = 379

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 157/340 (46%), Gaps = 51/340 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   F+ F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 78  MASIFRNFVITYNRTYESKEEAQWRLSIFAHNMVRAQKIQALDRGTAQYGVTKFSDLTEE 137

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAAC 173
           E           RT       RE+  K + + +  G + P  WDWR K       DQ  C
Sbjct: 138 EF----------RTIYLNPLLREEPGKKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMC 187

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K 
Sbjct: 188 GSCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKI 224

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C G    PS  Y+   +  GLE+E DY Y+   G    C++   K K++        
Sbjct: 225 DKACMGGL--PSSAYSAIKNLGGLETEDDYSYR---GHMQACSFSPEKAKVYINDSVELS 279

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +I
Sbjct: 280 QNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDI 339

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 340 PFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 379


>gi|6042196|ref|NP_003784.2| cathepsin F precursor [Homo sapiens]
 gi|12643325|sp|Q9UBX1.1|CATF_HUMAN RecName: Full=Cathepsin F; Short=CATSF; Flags: Precursor
 gi|4731642|gb|AAD26616.2|AF088886_1 cathepsin F precursor [Homo sapiens]
 gi|5305722|gb|AAD41790.1|AF132894_1 cathepsin F [Homo sapiens]
 gi|4826528|emb|CAB42883.1| cysteine proteinase [Homo sapiens]
 gi|15079738|gb|AAH11682.1| Cathepsin F [Homo sapiens]
 gi|22209085|gb|AAH36451.1| Cathepsin F [Homo sapiens]
 gi|61363874|gb|AAX42458.1| cathepsin F [synthetic construct]
 gi|123993139|gb|ABM84171.1| cathepsin F [synthetic construct]
 gi|189053904|dbj|BAG36411.1| unnamed protein product [Homo sapiens]
          Length = 484

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 161/362 (44%), Gaps = 50/362 (13%)

Query: 42  DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 100
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 101 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P  WDWR K       DQ  CGSCWAFS+ G                        +EGQ
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN-----------------------VEGQ 307

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G 
Sbjct: 308 WFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GH 362

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C +   K K++           + +   L K GP+SV +N+  +  Y     R    
Sbjct: 363 MQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRP 422

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A 
Sbjct: 423 LCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 482

Query: 389 ID 390
           +D
Sbjct: 483 VD 484


>gi|357162946|ref|XP_003579573.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 376

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 189/411 (45%), Gaps = 81/411 (19%)

Query: 12  KKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAF 71
           ++  +++ AV LL GVA+ L  P + D + +QVV   +   +E        N    F +F
Sbjct: 5   RRLPIVVAAVLLLSGVAA-LSSP-VEDPLIEQVVGGDEKNELE-------LNAEAHFASF 55

Query: 72  IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCK-TGF 122
           + +  + Y + +E   R   F  +    ++H+R      +G ++FSD +P+E   +  G 
Sbjct: 56  VQRFNKSYRDADEHAHRLSVFTANLRRARRHQRLDPSAVHGVTKFSDLTPDEFRDRFLGL 115

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 182
           +   R++ + ++        L     DG +P  +DWR+    GP  DQ +CGSCW+FS +
Sbjct: 116 RKYRRSFLKGLSGSAHDAPAL---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTS 171

Query: 183 GKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC-------- 234
                                  G LEG + + TGKL   S+ Q+V+C  +C        
Sbjct: 172 -----------------------GALEGAHYLATGKLEVLSEQQMVDCDHECDPSEPRAC 208

Query: 235 -SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
            +GC+G     +  Y  +A GLE+EKDYPY    G    C +DKSK+     K+F     
Sbjct: 209 DAGCNGGLMTTAFSYLAKAGGLETEKDYPYTGRGG---ACKFDKSKIAAQV-KNFSTVAV 264

Query: 293 SE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ 347
            E  +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGYG  
Sbjct: 265 DEDQIAANLVKHGPLAIGINAVFMQTYIGG-------VSCPFICGRHLDHGVLLVGYGSA 317

Query: 348 -------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 388
                     PYW+++NSWG    + G++KI RG    N CG++ +    T
Sbjct: 318 GYAPLRFKEKPYWIIKNSWGENWGESGYYKICRGAHVKNKCGVDSMVSTVT 368


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 160/345 (46%), Gaps = 49/345 (14%)

Query: 61  NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEF 108
           N  +   ++AF+ K  R Y +  E + R   F ++  +  E              G + F
Sbjct: 60  NSILNSMWQAFLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAF 119

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
           SD++  E+    GF+ S +      A R   +     +  D   P   DWR K    P  
Sbjct: 120 SDKTNSELDVLRGFRHSSK------ASRSGSQY----IPFDAAPPAEVDWRTKGAVTPVK 169

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           +Q  CGSCWAFS  G                        +EGQ+ + TGKLV  S+ QLV
Sbjct: 170 NQGDCGSCWAFSATGG-----------------------IEGQHYLATGKLVSLSEQQLV 206

Query: 229 ECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNAN-GEKFKCAYDKSKVKL-FTGK 285
           +C+    GCDG   + + EY  +  G+++E  YPY + N G   +C++D     +  TG 
Sbjct: 207 DCSSSNDGCDGGLMDLAFEYVKEHKGIDTEVHYPYVSGNTGYARQCSFDPKYAAVNVTGY 266

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +       +++ +  +GP+SV +N+ L           +D  C+P+DL H VL+VGYG
Sbjct: 267 VDIPEGQELLLQQAVGFHGPISVGINAGLPSFMAYESGIYSDHRCNPHDLDHGVLVVGYG 326

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             + +PYWL++NSWG    + G+ +I R  NN CG+  +A Y  +
Sbjct: 327 VDNGVPYWLIKNSWGEDWGENGYVRILRNHNNLCGVATMASYPLM 371


>gi|242061538|ref|XP_002452058.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
 gi|241931889|gb|EES05034.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
          Length = 371

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/375 (30%), Positives = 174/375 (46%), Gaps = 87/375 (23%)

Query: 60  DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEF 108
           DNE   N    F +F+ + G+ Y + EE   R   FK +    ++H+       +G ++F
Sbjct: 37  DNELELNAESHFLSFVQRFGKSYKDAEEHAYRLSIFKANLRRARRHQLLDPSAEHGVTKF 96

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKN 162
           SD +P E           RTY  +   R  + + L +   + PV      PD +DWR   
Sbjct: 97  SDLTPAEF---------RRTYLGLRKSRRALLRELGKSANEAPVLPTDGLPDDFDWRDHG 147

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
              P  +Q +CGSCW+FS +                       G LEG + + TGKL   
Sbjct: 148 AVTPVKNQGSCGSCWSFSTS-----------------------GALEGAHYLATGKLEVL 184

Query: 223 SKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKC 272
           S+ Q+V+C   C         SGC+G     +  Y  +A GLESEKDYPY    G   KC
Sbjct: 185 SEQQMVDCDHVCDTSEPDSCDSGCNGGLMTNAFSYLQKAGGLESEKDYPY---TGSDDKC 241

Query: 273 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
            +DKSK+ + + ++F   +  E  +   L K+GPL++ +N+  +  Y G           
Sbjct: 242 KFDKSKI-VASVQNFSVVSVDEGQIAANLIKHGPLAIGINAAYMQTYIGG-------VSC 293

Query: 332 PY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA--- 377
           PY     L H VLLVGYG       +  + PYW+++NSWG    + G++KI RG+N    
Sbjct: 294 PYICGRTLDHGVLLVGYGAAGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNK 353

Query: 378 CGIEQIAGYATIDVV 392
           CG++ +   +T+  V
Sbjct: 354 CGVDSMV--STVSAV 366


>gi|182892046|gb|AAI65744.1| Ctsf protein [Danio rerio]
          Length = 473

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 56/343 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---------HKKHERYGTSEFSDRSPE 114
           +L  FK F++   R Y++ EE ++R   F+Q+           +    YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 115 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS+ G                        +EGQ+  KTG+L+  S+ +LV+C
Sbjct: 279 GMCGSCWAFSVTGN-----------------------IEGQWFKKTGQLLSLSEQELVDC 315

Query: 231 AKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
            K    C G    PS  Y    +  GLE+E DY Y    G K  C +   KV  +     
Sbjct: 316 DKLDQACGGGL--PSNAYEAIENLGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSV 370

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
                 + +   L + GP+S  LN+  +  Y           C+P+ + HAVLLVG+G++
Sbjct: 371 ELPKDEKEIAAFLAENGPVSAALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQR 430

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           + +P+W ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 431 NGVPFWAIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIVN 473


>gi|355681666|gb|AER96819.1| cathepsin W [Mustela putorius furo]
          Length = 373

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 167/356 (46%), Gaps = 61/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           + F+ F  +  R Y+N +E   R E F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFELFRAQYNRSYSNPKEYAHRLEIFAHNLAQAQKMEVEDLATAEFGMTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G +      E     R+   +++ME      VP + DWRK K V  P  +Q  C  
Sbjct: 100 EQLHGHQ-KITPGETPAVGRKVGSEVVME-----SVPASCDWRKLKGVKSPIKEQGNCNC 153

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  ++I+  + V+ S  +L++C +   
Sbjct: 154 CWAMAAAGN-----------------------IEALWSIRYNQSVQVSVQELLDCNRCGD 190

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  +   + +GL SEKDYP++  + ++ KC     K K+   +DF+   N  
Sbjct: 191 GCKGGFVWDAFVTVLNNSGLASEKDYPFR-GSLKRHKCLASNYK-KVAWIQDFIMLQNNE 248

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
           +TM   L  +GP++V +N  L+  Y    I+    TC PY + H+VLLVG+GK ++    
Sbjct: 249 QTMANYLATHGPITVTINMKLLQQYKKGVIKATPATCDPYLVNHSVLLVGFGKTNSSERR 308

Query: 350 --------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                         IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D+
Sbjct: 309 RAKGGHFWPHPHRPIPYWILKNSWGAEWGEEGYFRLHRGSNTCGITKYPLTARVDL 364


>gi|34761156|gb|AAQ81938.1| cysteine proteinase precursor [Ipomoea batatas]
          Length = 371

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 170/396 (42%), Gaps = 77/396 (19%)

Query: 33  LPSL-TDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAFIVKRGRQYANDEEIK 86
           LPSL    +T   V R D   +   +  D E     N    F  F  K G+ YA  EE  
Sbjct: 6   LPSLLIHALTAACVVRADEDPLIRQVVSDGEDDALLNADHHFTLFKSKYGKSYATQEEHD 65

Query: 87  ERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI------ 132
            R   FK +    K+H+       +G ++FSD +P+E           RTY  I      
Sbjct: 66  YRLSVFKANLRRAKRHQMLDPSAVHGVTKFSDLTPKEF---------RRTYLGIRKSSSS 116

Query: 133 ---VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYL 189
              +  +   +    E+     +P  ++WR         DQ  CGSCW+FS  G      
Sbjct: 117 KQKLKLKLPADAHAAEILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTG------ 170

Query: 190 LQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGC 240
                             LEG   + TG+L+  ++ +LV+C   C         +GC+G 
Sbjct: 171 -----------------TLEGTNFLATGELLSLNEQELVDCDHLCDPKKAGACDAGCNGG 213

Query: 241 FFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI 299
               + EY  Q+G LE EKDYPY   +G    C +DKSK+        +     + +   
Sbjct: 214 LMTTAYEYVLQSGGLEKEKDYPYTGRDG---TCKFDKSKIAAAVANFSVVSLDEDQIAAN 270

Query: 300 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPY 352
           L K+GPLSV +NS  +  Y G         CS  +L H VL+VGYG          + PY
Sbjct: 271 LVKHGPLSVGINSIFMQTYIGG--VSCPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPY 328

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           W+++NSWG    +EG++KI RGNN CG++ +    T
Sbjct: 329 WIIKNSWGENWGEEGYYKICRGNNICGVDSMVSSVT 364


>gi|117606135|ref|NP_001071036.1| cathepsin F precursor [Danio rerio]
 gi|115313533|gb|AAI24244.1| Cathepsin F [Danio rerio]
          Length = 473

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 56/343 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---------HKKHERYGTSEFSDRSPE 114
           +L  FK F++   R Y++ EE ++R   F+Q+           +    YG ++FSD + +
Sbjct: 171 LLTMFKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTED 230

Query: 115 EI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           E     L     +WS +            ++M   +    P PD WDWR      P  +Q
Sbjct: 231 EFRMMYLNPMLSQWSLK------------KEMKPAIPASAPAPDTWDWRDHGAVSPVKNQ 278

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS+ G                        +EGQ+  KTG+L+  S+ +LV+C
Sbjct: 279 GMCGSCWAFSVTGN-----------------------IEGQWFKKTGQLLSLSEQELVDC 315

Query: 231 AKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
            K    C G    PS  Y    +  GLE+E DY Y    G K  C +   KV  +     
Sbjct: 316 DKLDQACGGGL--PSNAYEAIENLGGLETETDYSY---TGHKQSCDFSTGKVAAYINSSV 370

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
                 + +   L + GP+S  LN+  +  Y           C+P+ + HAVLLVG+G++
Sbjct: 371 ELPKDEKEIAAFLAENGPVSAALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGFGQR 430

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           + +P+W ++NSWG    ++G++ + RG+  CGI ++   A ++
Sbjct: 431 NGVPFWAIKNSWGEDYGEQGYYYLYRGSGLCGIHKMCSSAIVN 473


>gi|83944664|gb|ABC48936.1| cathepsin F like protease [Glossina morsitans morsitans]
          Length = 471

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 162/340 (47%), Gaps = 53/340 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILC 118
           F  F +K  R Y    E + RF  FKQ+           +   +YG +EF+D +  E   
Sbjct: 166 FAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQGSAKYGITEFADMTSPEYKQ 225

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +TG  W     +     + ++  +         +P  +DWR+K       +Q  CGSCWA
Sbjct: 226 RTGL-WQRDPQKAASNPKAEIPNI--------DLPKEFDWREKGAISAVKNQGNCGSCWA 276

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EG +A++TG L ++S+ +L++C    S C+
Sbjct: 277 FSVTGN-----------------------IEGLHAVRTGVLEQYSEQELLDCDTSDSACN 313

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-M 296
           G   + + E   +  GLE E DYPY   +  K +C ++ +K+ +   K  +    +ET +
Sbjct: 314 GGLPDNAYEAIEKIGGLELESDYPY---HARKDQCHFNSTKIHVKV-KGHVDLPKNETAI 369

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD------NI 350
            + L   GP+S+ +N++ +  Y G         CS  +L H VL+VGY   D       +
Sbjct: 370 AQWLIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYRVSDYPMFKKTL 429

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+V+NSWG    ++G++++ RG+N CG+ +++  A +D
Sbjct: 430 PYWIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSSAVLD 469


>gi|291385469|ref|XP_002709277.1| PREDICTED: cathepsin F [Oryctolagus cuniculus]
          Length = 460

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 162/374 (43%), Gaps = 52/374 (13%)

Query: 32  CLPSLTDRITDQVVARVDTLAI--EGSLTFD-NENILETFKAFIVKRGRQYANDEEIKER 88
           C P  T R  D+      TL      SL  D +  +   FK F+    R Y + EE + R
Sbjct: 124 CGPVDTRRTEDRNETLKSTLPALNRDSLPQDFSVKMASIFKKFVRTYNRTYESKEEAQWR 183

Query: 89  FEYFK---------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
              F          Q   +   +YG ++FSD + EE             Y   +   E  
Sbjct: 184 LSVFASNMVRAQKIQSLDRGTAQYGITKFSDLTEEEF---------RTIYLNPLLRSEPG 234

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
           +KM +    + P P  WDWR K       DQ  CGSCWAFS+ G                
Sbjct: 235 KKMQLAKPVEDPAPPQWDWRSKGAVTNVKDQGMCGSCWAFSVTGN--------------- 279

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLES 256
                   +EGQ+ +K G L+  S+ +L++C K    C G    PS  Y+   +  GLE+
Sbjct: 280 --------VEGQWFLKRGTLLSLSEQELLDCDKLDKACLGGL--PSNAYSAIKNLGGLET 329

Query: 257 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 316
           E+DY Y+   G    C +   K K++           + +   L K GP+SV +N+  + 
Sbjct: 330 EEDYTYQ---GHMQACNFSAQKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 386

Query: 317 DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 376
            Y           CSP+ + HAVLLVGYG +   P+W ++NSWG    +EG++ + RG+ 
Sbjct: 387 FYRRGIAHPLRPLCSPWLIDHAVLLVGYGNRSATPFWAIKNSWGADWGEEGYYYLYRGSG 446

Query: 377 ACGIEQIAGYATID 390
            CG+  +A  A +D
Sbjct: 447 VCGVNTMASSAVVD 460


>gi|240255643|ref|NP_567010.5| Papain family cysteine protease [Arabidopsis thaliana]
 gi|17979125|gb|AAL49820.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332645795|gb|AEE79316.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 367

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 174/391 (44%), Gaps = 85/391 (21%)

Query: 43  QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 93
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 94  QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 144
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 145 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G                     
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA-------------------- 169

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-L 254
               EG + + TGKL+  S+ QLV+C + C         +GC G     + EY  +AG L
Sbjct: 170 ---AEGAHFVSTGKLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGL 226

Query: 255 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG----SETMKKILYKYGPLSVLL 310
           E E+ YPY    G++  C +D  KV +      L+F         +   L ++GPL+V L
Sbjct: 227 EEERSYPY---TGKRGHCKFDPEKVAV----RVLNFTTIPLDENQIAANLVRHGPLAVGL 279

Query: 311 NSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWG 360
           N+  +  Y G    P+      CS  ++ H VLLVGYG +        N PYW+++NSWG
Sbjct: 280 NAVFMQTYIGGVSCPL-----ICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWG 334

Query: 361 PIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
               + G++K+ RG++ CGI  +       V
Sbjct: 335 KKWGENGYYKLCRGHDICGINSMVSAVATQV 365


>gi|71482944|gb|AAZ32411.1| cysteine proteinase glycinain type [Nicotiana benthamiana]
          Length = 355

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 172/380 (45%), Gaps = 87/380 (22%)

Query: 38  DRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQ 94
           D +  QVV+  +T         D+ ++L     F  F  K G+ YA++EE   RF+ FK 
Sbjct: 25  DPLIRQVVSETET---------DDSHLLNAEHHFSLFKSKFGKIYASEEEHDHRFKVFKA 75

Query: 95  D--GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV 146
           +    ++H+       +G ++FSD +P E           RTY  +   + K+      +
Sbjct: 76  NLRRARRHQLLDPSAEHGITKFSDLTPSEF---------RRTYLGLHKPKPKLNAEKAPI 126

Query: 147 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPG 206
                +P  +DWR         +Q +CGSCW+FS  G                       
Sbjct: 127 LPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTG----------------------- 163

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LES 256
            +EG + + TG+LV  S+ QLV+C  +C         +GC G     + EYT +AG L+ 
Sbjct: 164 AVEGAHFLATGELVSLSEQQLVDCDHECDPEQQDSCDAGCSGGLMTTAFEYTLKAGGLQR 223

Query: 257 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 316
           EKDYPY    G   KC +DKSK+        +     + +   L K+GPL+V +N+  + 
Sbjct: 224 EKDYPYTGKXG---KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQ 280

Query: 317 DYNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIG 363
            Y G    P+   ++ D         H VLLVGYG     P       YW+++NSWG   
Sbjct: 281 TYVGGVSCPLICFKRQD---------HGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENW 331

Query: 364 PDEGFFKIERGNNACGIEQI 383
            + G++KI RG+N CG++ +
Sbjct: 332 GEHGYYKICRGHNICGVDAM 351


>gi|171854651|dbj|BAG16515.1| putative cysteine proteinase [Capsicum chinense]
          Length = 367

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 165/362 (45%), Gaps = 74/362 (20%)

Query: 60  DNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSE 107
           DN N L      F  F  K G+ YA  EE   R + FK +  +  +H+       +G ++
Sbjct: 38  DNNNHLLNAEHHFSLFKSKFGKIYATQEEHDHRLKVFKANLRRARRHQLLDPTAEHGITK 97

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           FSD +P E           RTY  +   + K+      +     +P+ +DWR+K      
Sbjct: 98  FSDLTPSEF---------RRTYLGLHKPKPKLSTTKAPILPTSDLPEDFDWREKGAVTGV 148

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q +CGSCW+FS                         G +EG + + TG+LV  S+ QL
Sbjct: 149 KNQGSCGSCWSFSTT-----------------------GAVEGAHFLATGELVSLSEQQL 185

Query: 228 VECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKS 277
           V+C  +C         +GC G     + EYT +A GL+ EKDYPY   NG+   C +DKS
Sbjct: 186 VDCDHECDAEQKSECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRNGQ---CHFDKS 242

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 334
           K+        +     + +   L K+GPL+V +NS  +  Y G    P+      C  + 
Sbjct: 243 KIAASVTNYSVVGLDEDQIAANLVKHGPLAVGINSAWMQTYIGGVSCPL-----VCFKHQ 297

Query: 335 LGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
             H VLLVGYG       +    PYW+++NSWG    + G++KI RG +N CG++ +   
Sbjct: 298 -DHGVLLVGYGSAGFAPIRLKAKPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDAMVST 356

Query: 387 AT 388
            T
Sbjct: 357 VT 358


>gi|19849|emb|CAA78361.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 182/406 (44%), Gaps = 87/406 (21%)

Query: 18  IQAVFLLCGVASCLCLPSLT----DRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           ++ +FLL  +A  L   ++     D +  QVV+  D      S   + E+    FK+   
Sbjct: 1   MERLFLLSLLAFVLFSSAIAFSDEDPLIRQVVSETDD-----SHLLNAEHHFSLFKS--- 52

Query: 74  KRGRQYANDEEIKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCKTGFKWS 125
           K G+ YA++EE   RF+ FK +  +            +G ++FSD +P E          
Sbjct: 53  KFGKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEF--------- 103

Query: 126 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKF 185
            RTY  +   + K+      +     +P  +DWR         +Q +CGSCW+FS  G  
Sbjct: 104 RRTYLGLHKPKPKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTG-- 161

Query: 186 SNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 236
                                 +EG + + TG+LV  S+ QLV+C  +C         +G
Sbjct: 162 ---------------------AVEGAHFLATGELVSLSEQQLVDCDHECDPEQQDACDAG 200

Query: 237 CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C G  +  + EYT +AG L+ EKDYPY   +G   KC +DKSK+        +     + 
Sbjct: 201 CGGGHYATAFEYTLKAGGLQLEKDYPYTGKDG---KCHFDKSKICAAVTNFSVIGLDEDQ 257

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNG---TPI---RKNDETCSPYDLGHAVLLVGYGKQDN 349
           +   L K+GPL+V +N+  +  Y G    P+   ++ D         H VLLVGYG    
Sbjct: 258 IAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQD---------HGVLLVGYGSHGF 308

Query: 350 IP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            P       YW+++NSWG    + G++KI RG+N CG++ +    T
Sbjct: 309 APIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVT 354


>gi|356553413|ref|XP_003545051.1| PREDICTED: cysteine proteinase 15A-like [Glycine max]
          Length = 367

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 161/351 (45%), Gaps = 73/351 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F +F  K G++YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 48  NAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 107

Query: 115 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E   +  GFK       R+ A+ +K   +     KD  +P  +DWR K       DQ AC
Sbjct: 108 EFRRQFLGFK-----PLRLPANAQKAPILPT---KD--LPKDFDWRDKGAVTNVKDQGAC 157

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW+FS  G                        LEG + + TG+LV  S+ QLV+C   
Sbjct: 158 GSCWSFSTTG-----------------------ALEGAHYLATGELVSLSEQQLVDCDHV 194

Query: 234 C---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           C         SGC+G     + EY  Q+G ++ EKDYPY   +G    C +DK+KV    
Sbjct: 195 CDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATV 251

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 339
               +     + +   L K GPL+V +N+  +  Y G           PY     L H V
Sbjct: 252 SNYSVVSLDEDQIAANLVKNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGV 304

Query: 340 LLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           L+VGYG+         N PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 305 LIVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|402892718|ref|XP_003909556.1| PREDICTED: cathepsin F [Papio anubis]
          Length = 460

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 150/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 159 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 218

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 219 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 269

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 270 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 306

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 307 KACMGGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQ 361

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 362 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 421

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 422 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 460


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 157/345 (45%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F  K  + Y + EE   RF  FK +  +  +H+       +G ++FSD +P E    
Sbjct: 53  FSLFKSKFKKSYGSQEEHDYRFSVFKANLRRAARHQELDPTASHGVTQFSDLTPAE---- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+       R+   ++  E  ++       +P+ +DWR K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRRLRLPKDANEAPILPTSD---LPEDFDWRDKGAVGPIKNQGSCGSCWSF 163

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S                         G LEG + + TG+LV  S+ QLV+C  +C     
Sbjct: 164 SAT-----------------------GALEGAHFLATGELVSLSEQQLVDCDHECDPEEP 200

Query: 235 ----SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT +A GL  E+DYPY     ++  C +DK+KV        + 
Sbjct: 201 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT--DRDACKFDKNKVAARVANFSVV 258

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 259 SLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVLLVGYG 311

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                  +    P+W+++NSWG    + GF+KI RG N CG++ +
Sbjct: 312 SAGYSPVRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSM 356


>gi|355751926|gb|EHH56046.1| Cathepsin F, partial [Macaca fascicularis]
          Length = 381

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 149/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 84  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 141

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +   E   KM          P  WDWR K       DQ  CGSCWA
Sbjct: 142 -------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWA 194

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 195 FSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMDKACM 231

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++           + 
Sbjct: 232 GGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQNEQK 286

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP+W +
Sbjct: 287 LAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIPFWAI 346

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 347 KNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 381


>gi|42516556|gb|AAS17989.1| cysteine proteinase CP2 [Paragonimus westermani]
          Length = 272

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 131/258 (50%), Gaps = 40/258 (15%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
                  +Q +CGSCWAFS AG                        +EGQ+ IKTG+LV 
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGN-----------------------VEGQWFIKTGQLVS 100

Query: 222 FSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            SK QLV+C +   GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ 
Sbjct: 101 LSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL- 156

Query: 281 LFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
           L    D +    SE      L ++GPLS LLN+  +  Y    I  + E CSP DL HAV
Sbjct: 157 LAKIDDSIALGPSEDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYEECSPVDLNHAV 216

Query: 340 LLVGYGKQDNIPYWLVRN 357
           L VGY K+ ++PYW+++N
Sbjct: 217 LTVGYDKEGDMPYWIIKN 234


>gi|335281454|ref|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa]
 gi|350579927|ref|XP_003480717.1| PREDICTED: cathepsin F-like [Sus scrofa]
          Length = 490

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 153/338 (45%), Gaps = 55/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y   EE + R   F  +  +  +         RYG ++FSD + EE   
Sbjct: 193 FKEFVTTYNRTYDTKEEARWRMSVFANNMVRAQKIQALDTGTARYGVTKFSDLTEEEF-- 250

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +   E   KM +        P  WDWRKK       DQ  CGSCWA
Sbjct: 251 -------RTIYLNPLLQEEPGRKMRLAKSVSSLPPPEWDWRKKGAVTKVKDQGMCGSCWA 303

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +K G L+  S+ +L++C K   GC 
Sbjct: 304 FSVTGN-----------------------VEGQWFLKQGTLLSLSEQELLDCDKVDKGCM 340

Query: 239 GCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+      GLE+E+DY Y+   G    C+++  K K++           + 
Sbjct: 341 GGL--PSNAYSAIKTLGGLETEEDYSYR---GHLQTCSFNAEKAKVYINDSVELSQNEQK 395

Query: 296 MKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           +   L + GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +   P+
Sbjct: 396 LAAWLAEKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSATPF 452

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 453 WAIKNSWGTDWGEEGYYYLYRGSGACGVNIMASSAVVN 490


>gi|118489556|gb|ABK96580.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 367

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 168/386 (43%), Gaps = 78/386 (20%)

Query: 27  VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIK 86
           VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE  
Sbjct: 19  VASTVSSTDLDDPLIIQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEHD 69

Query: 87  ERFEYFKQD--GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 138
            RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R   R+  D  K
Sbjct: 70  YRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPKEF--RRQFLGLKRRL-RLPTDANK 126

Query: 139 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
              +         +P  +DWR         DQ +CGSCW+FS  G               
Sbjct: 127 APILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATG--------------- 166

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT 249
                    LEG + + TG+L   S+ QLV+C  +C         SGCDG     + EY 
Sbjct: 167 --------ALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYA 218

Query: 250 HQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 308
            +AG LE E+DYPY   +G    C +DKSKV        +     + +   L K+GPLSV
Sbjct: 219 LKAGGLEREEDYPYTGTDGGT--CKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSV 276

Query: 309 LLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYGKQ-------DNIPYWLVRN 357
            +N+  +  Y G           PY       H VLLVGYG            P+W+++N
Sbjct: 277 AINAAFMQTYVGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKN 329

Query: 358 SWGPIGPDEGFFKIERGNNACGIEQI 383
           SWG    + G++KI RG N CG++ +
Sbjct: 330 SWGQNWGENGYYKICRGRNICGVDSM 355


>gi|215401412|ref|YP_002332715.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
 gi|209483953|gb|ACI47386.1| cathepsin [Spodoptera litura nucleopolyhedrovirus II]
          Length = 337

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 159/338 (47%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK 119
           F+ FI +  ++Y  ++E K R+  F+ +     HK        Y  + F+D +  E++ +
Sbjct: 40  FEKFIAQYNKKYKTEDEKKYRYNIFRHNMESINHKNSRNDSAIYKINRFADMTKNEVVIR 99

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGANFCETIVVDGPAQRQRPTSFDWRTLNKVTSVKDQGMCG 148

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CWAF  AG                      G LE QYAIK  +L++ ++ QLV+C    
Sbjct: 149 ACWAF--AGL---------------------GALESQYAIKYDRLIDLAEQQLVDCDSVD 185

Query: 235 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E   H  G+E E DYPY+    E+  CA    K        + +    
Sbjct: 186 MGCDGGLIHTAYEQIMHMGGVEQEFDYPYR---AERQPCALKPHKFAAGVRSCYRYVLLN 242

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG ++N+P+
Sbjct: 243 EERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAVLLVGYGVENNVPF 298

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 299 WIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336


>gi|4678299|emb|CAB41090.1| cysteine proteinase precursor-like protein [Arabidopsis thaliana]
          Length = 363

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 174/387 (44%), Gaps = 81/387 (20%)

Query: 43  QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 93
            VVA V+ L I   +T DN     N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADNRRIRPNLLGTHTESKFRLFMSDYGKNYSTREEYIHRLGIFA 76

Query: 94  QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLM 144
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPSAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGGTVGAEAP 130

Query: 145 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G                     
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA-------------------- 169

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVEC----AKQC-SGCDGCFFEPSIEYTHQAG-LESEK 258
               EG + + TGKL+  S+ QLV+C     K C +GC G     + EY  +AG LE E+
Sbjct: 170 ---AEGAHFVSTGKLLSLSEQQLVDCDQADKKACDNGCGGGLMTNAYEYLMEAGGLEEER 226

Query: 259 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG----SETMKKILYKYGPLSVLLNSDL 314
            YPY    G++  C +D  KV +      L+F         +   L ++GPL+V LN+  
Sbjct: 227 SYPY---TGKRGHCKFDPEKVAV----RVLNFTTIPLDENQIAANLVRHGPLAVGLNAVF 279

Query: 315 IHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGP 364
           +  Y G    P+      CS  ++ H VLLVGYG +        N PYW+++NSWG    
Sbjct: 280 MQTYIGGVSCPL-----ICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWG 334

Query: 365 DEGFFKIERGNNACGIEQIAGYATIDV 391
           + G++K+ RG++ CGI  +       V
Sbjct: 335 ENGYYKLCRGHDICGINSMVSAVATQV 361


>gi|20069912|ref|NP_613116.1| cathepsin [Mamestra configurata NPV-A]
 gi|37077373|sp|Q8QLK1.1|CATV_NPVMC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|20043306|gb|AAM09141.1| cathepsin [Mamestra configurata NPV-A]
 gi|33331744|gb|AAQ11052.1| putative cysteine proteinase [Mamestra configurata NPV-A]
          Length = 337

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/375 (31%), Positives = 175/375 (46%), Gaps = 62/375 (16%)

Query: 31  LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFE 90
           L L S      DQVVA    + I+ +L   N   L  F+ FI +  +QY++++E K R+ 
Sbjct: 8   LLLVSAVLTSHDQVVA----VTIKPNLYNINSAPL-YFEKFISQYNKQYSSEDEKKYRYN 62

Query: 91  YFKQDG---HKKHER-----YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 141
            F+ +    + K+ R     Y  + F+D +  E++ + TG            A  +    
Sbjct: 63  IFRHNIESINAKNSRNDSAVYKINRFADMTKNEVVNRHTGL-----------ASGDIGAN 111

Query: 142 MLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHID 197
               +  DGP     P  +DWR  N      DQ  CG+CWAF  AG              
Sbjct: 112 FCETIVVDGPGQRQRPANFDWRNYNKVTSVKDQGMCGACWAF--AGL------------- 156

Query: 198 QFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLES 256
                   G LE QYAIK  +L++ ++ QLV+C     GCDG     + E   H  G+E 
Sbjct: 157 --------GALESQYAIKYDRLIDLAEQQLVDCDFVDMGCDGGLIHTAYEQIMHIGGVEQ 208

Query: 257 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLI 315
           E DYPYK     +  CA    K  +     + +   SE  ++ +L   GP+++ +++  +
Sbjct: 209 EYDYPYK---AVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDL 265

Query: 316 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
            DY G  I      C    L HAVLLVGYG ++N+PYW ++NSWG    + G+ +I RG 
Sbjct: 266 TDYYGGVI----SFCENNGLNHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGV 321

Query: 376 NACG-IEQIAGYATI 389
           N+CG I ++A  A I
Sbjct: 322 NSCGMINELASSAQI 336


>gi|355566270|gb|EHH22649.1| Cathepsin F [Macaca mulatta]
          Length = 484

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 150/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 183 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 242

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 243 EF---------RTIYLNPLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 293

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 294 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 330

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 331 KACMGGL--PSNAYSAIKNLGGLETEDDYSYR---GHMQACNFSAEKAKVYINDSVELSQ 385

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + +IP
Sbjct: 386 NEQKLAAWLAKKGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDIP 445

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 446 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 484


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 170/369 (46%), Gaps = 61/369 (16%)

Query: 48  VDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY 103
           +D++ ++  +  D N  +   +K F+    R Y +  E + RF+ F  +     K + R+
Sbjct: 45  LDSMHMQDVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRF 104

Query: 104 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG---- 150
                    G +EFSD+    I+    F+  E         R +  +  +   +DG    
Sbjct: 105 IQGQVSYTMGINEFSDKVIGLIIHTICFQTDEEL------KRLRCFRGSLNASRDGSKYI 158

Query: 151 ----PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPG 206
               P P   DWR K    P  +Q  CGSCWAFS  G                       
Sbjct: 159 TIAAPPPSEIDWRNKGAVTPVKNQGNCGSCWAFSATGA---------------------- 196

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYK 263
            +EGQ  + TG LV  S+ QLV+C+ +   + C+G   + + +Y   + G+++E  YPY 
Sbjct: 197 -IEGQNFLATGNLVSLSEQQLVDCSSEYGNNACNGGLMDNAFKYVKDSNGIDTEASYPY- 254

Query: 264 NANGE----KFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 318
             +GE       C ++ K  V   TG   L       +K+ +  YGP+SV +N+ L    
Sbjct: 255 -VSGETGDANPTCRFNLKEAVVRVTGYIDLPRGQVSELKQAVGHYGPISVAINAGLPSFM 313

Query: 319 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNA 377
           +      +D+ CS  DL H VLLVGYG+++ IPYWL++NSWGP   + G+ KI R  NN 
Sbjct: 314 SYKSGVYSDDQCSSDDLDHGVLLVGYGEENGIPYWLIKNSWGPHWGENGYVKILRDHNNL 373

Query: 378 CGIEQIAGY 386
           CG+  +A Y
Sbjct: 374 CGVASMASY 382


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 151/350 (43%), Gaps = 71/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F +F  K  + YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 51  NAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRRARLHAKLDPSAVHGVTKFSDLTPA 110

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E           R +  +   R         +     +P  +DWR K       DQ ACG
Sbjct: 111 EF---------RRQFLGLKPLRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGACG 161

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C   C
Sbjct: 162 SCWSFSTTG-----------------------ALEGAHYLATGELVSLSEQQLVDCDHVC 198

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EY  Q+G ++ EKDYPY   +G    C +DK+KV     
Sbjct: 199 DPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVS 255

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 256 NYSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICGKHLDHGVL 308

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG+         N PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 309 LVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 358


>gi|49456321|emb|CAG46481.1| CTSF [Homo sapiens]
          Length = 338

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 150/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 37  MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 96

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 97  EF---------RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 147

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 148 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 184

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+  DY Y+   G    C +   K K++         
Sbjct: 185 KACMGGL--PSNAYSAIKNLGGLETVDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 239

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 240 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 299

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 300 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 338


>gi|6467382|gb|AAF13146.1|AF136279_1 cathepsin F precursor [Homo sapiens]
          Length = 484

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 161/362 (44%), Gaps = 50/362 (13%)

Query: 42  DQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH 100
           ++  + V +L  E  L+ D    +   FK F++   R Y + EE + R   F  +  +  
Sbjct: 160 NETFSSVISLLNEDPLSQDLPVKMASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQ 219

Query: 101 E---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
           +         +YG ++FSD + EE             Y   +  +E   KM         
Sbjct: 220 KIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNTLLRKEPGNKMKQAKSVGDL 270

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P  WDWR K       DQ  CGSCWAFS+ G                        ++GQ
Sbjct: 271 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN-----------------------VKGQ 307

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G 
Sbjct: 308 WFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GH 362

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C +   K K++           + +   L K GP+SV +N+  +  Y     R    
Sbjct: 363 MQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRP 422

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A 
Sbjct: 423 LCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 482

Query: 389 ID 390
           +D
Sbjct: 483 VD 484


>gi|225427714|ref|XP_002264345.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
          Length = 377

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 79/379 (20%)

Query: 38  DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 93
           D I  QVV  +    +EGS   + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGS---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 94  QD--GHKKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 145
            +    ++H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 146 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFP 205
           +     +P+ +DWR         +Q +CGSCW+FS  G                      
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGA--------------------- 177

Query: 206 GMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LE 255
             LEG   + TG LV  S+ QLVEC  +C         SGC+G     + EYT +AG L 
Sbjct: 178 --LEGANFLATGNLVSLSEQQLVECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLM 235

Query: 256 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 315
            E+DYPY     ++  C +DK+K+        +     + +   L K GPL+V +N+  +
Sbjct: 236 KEEDYPYTGT--DRGSCKFDKTKIAASVSNFSVISLDEDQIAANLVKNGPLAVAINAVFM 293

Query: 316 HDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGP 364
             Y G           PY     L H VLLVGYG       +  + PYW+++NSWG    
Sbjct: 294 QTYVGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWG 346

Query: 365 DEGFFKIERGNNACGIEQI 383
           + GF+KI RG N CG++ +
Sbjct: 347 ENGFYKICRGRNVCGVDSM 365


>gi|224066056|ref|XP_002302004.1| predicted protein [Populus trichocarpa]
 gi|222843730|gb|EEE81277.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 169/386 (43%), Gaps = 78/386 (20%)

Query: 27  VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIK 86
           VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE  
Sbjct: 19  VASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEHD 69

Query: 87  ERFEYFKQD--GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 138
            RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  K
Sbjct: 70  YRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDANK 126

Query: 139 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
              +         +P  +DWR         DQ +CGSCW+FS  G               
Sbjct: 127 APILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATG--------------- 166

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT 249
                    LEG + + TG+L   S+ QLV+C  +C         SGCDG     + EY 
Sbjct: 167 --------ALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYA 218

Query: 250 HQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 308
            +AG LE E+DYPY   +G    C +DKSKV        +     + +   L K+GPLSV
Sbjct: 219 LKAGGLEREEDYPYTGTDGGT--CKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSV 276

Query: 309 LLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYGKQ-------DNIPYWLVRN 357
            +N+  +  Y G           PY       H VLLVGYG            P+W+++N
Sbjct: 277 AINAAFMQTYVGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKN 329

Query: 358 SWGPIGPDEGFFKIERGNNACGIEQI 383
           SWG    + G++KI RG N CG++ +
Sbjct: 330 SWGQNWGENGYYKICRGRNICGVDSM 355


>gi|395742406|ref|XP_003777749.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pongo abelii]
          Length = 490

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 164/375 (43%), Gaps = 52/375 (13%)

Query: 29  SCLCLPSLTDRITDQVVARVDTLAIEGSLTFD-NENILETFKAFIVKRGRQYANDEEIKE 87
           S L  P   +R  ++  + V +L  E  L  D    +   FK F++   R Y + EE + 
Sbjct: 155 SSLSQPHPDNR--NETFSSVISLLNEDPLPQDLPVKMASIFKNFVITYNRTYESKEEARW 212

Query: 88  RFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 138
           R   F  +  +  +         +YG ++FSD + EE             Y   +   E 
Sbjct: 213 RLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF---------RTIYLNPLLREEP 263

Query: 139 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
             KM          P  WDWR K       DQ  CGSCWAFS+ G               
Sbjct: 264 SNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN-------------- 309

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLE 255
                    +EGQ+ +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE
Sbjct: 310 ---------VEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLE 358

Query: 256 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 315
           +E DY Y+   G    C +   K K++           + +   L K GP+SV +N+  +
Sbjct: 359 TEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGM 415

Query: 316 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
             Y     R     CSP+ + HAVLLVGYG + ++P+W ++NSWG    ++G++ + RG+
Sbjct: 416 QFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGS 475

Query: 376 NACGIEQIAGYATID 390
            ACG+  +A  A +D
Sbjct: 476 GACGVNTMASSAVVD 490


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TG+LV  S+ QLV+C  QC     
Sbjct: 156 SATGA-----------------------LEGAHFLSTGELVSLSEQQLVDCDHQCDPEEA 192

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EY  +  G+  E+DYPY   NG    C +DK+K+        + 
Sbjct: 193 GSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGT--CKFDKAKIAASVANFSVV 250

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 251 SRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYG 303

Query: 346 KQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 SESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348


>gi|290997496|ref|XP_002681317.1| cysteine protease [Naegleria gruberi]
 gi|284094941|gb|EFC48573.1| cysteine protease [Naegleria gruberi]
          Length = 350

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 153/346 (44%), Gaps = 55/346 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEILCK 119
           F  F  K  + Y  ++  K R++ FK +  K        K E +G S+F D +PEE   K
Sbjct: 36  FVKFSKKHAKLYGAEDHGK-RYQIFKSNVEKARYYNHVGKRETFGVSKFMDLTPEEF--K 92

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F     T E         ++ ++  ++    P +WDWR+K    P  +Q ACGSCW F
Sbjct: 93  RMFLMKTYTPEEARKILAAPKEAVVTAQQVKDTPTSWDWRQKGAVTPVKNQGACGSCWTF 152

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        +EG + IKTGKLV  S+ QLV+C   C     
Sbjct: 153 STTGN-----------------------VEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQG 189

Query: 235 -----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                +GC+G     + +Y     GL +E  YPY+   G    C ++KS V +       
Sbjct: 190 QQACDAGCNGGLMWSAFQYVIKTGGLVTEDSYPYE---GVDDTCRFNKSNVAVTINSWTS 246

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +    M   L   GP+S+ +N++ +  Y  T    N   C+P DL H VL+VG+G   
Sbjct: 247 IPSDEGKMAAWLAANGPISIAINAEWLQTY--TSGISNPWFCNPQDLDHGVLIVGFGTGS 304

Query: 349 NI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           N       YW+++NSWG    + G+F+I RG   CG+  +   + I
Sbjct: 305 NWLGEKEDYWIIKNSWGADWGESGYFRIVRGKGKCGLNSVPSSSLI 350


>gi|209170907|ref|YP_002268053.1| agip23 [Agrotis ipsilon multiple nucleopolyhedrovirus]
 gi|208436498|gb|ACI28725.1| viral cathepsin [Agrotis ipsilon multiple nucleopolyhedrovirus]
          Length = 364

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 158/338 (46%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER----YGTSEFSDRSPEEILCK 119
           F+ FI +  + Y N++E K R+  F+ +     HK        Y  + F+D +  E++ +
Sbjct: 67  FEKFISQYNKHYKNEDEKKYRYNIFRHNIESINHKNSRNDSAVYKINRFADMTKNEVVIR 126

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 127 HTG-----------LASGELGVNFCETIVVDGPGQRQRPTSFDWRTLNKVTSVKDQGMCG 175

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CWAF  AG                      G LE QYAIK  +L++ S+ QLV+C    
Sbjct: 176 ACWAF--AGL---------------------GALESQYAIKYDRLIDLSEQQLVDCDHVD 212

Query: 235 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E      G+E + DYPY+    E+  CA    K        + +    
Sbjct: 213 MGCDGGLIHTAYEEIMRMGGVEQDFDYPYR---AERQPCALKPHKFAAGVRSCYRYVLLN 269

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  I DY G  +      C    L HAVLLVGYG ++N+PY
Sbjct: 270 EERLEDLLRHVGPIAIAVDAVDITDYYGGIV----SFCENNGLNHAVLLVGYGVENNVPY 325

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 326 WILKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 363


>gi|72389861|ref|XP_845225.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389863|ref|XP_845226.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359933|gb|AAX80358.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359934|gb|AAX80359.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801760|gb|AAZ11666.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801761|gb|AAZ11667.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C    SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|1353726|gb|AAB01769.1| cysteine proteinase homolog, partial [Naegleria fowleri]
          Length = 347

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 161/355 (45%), Gaps = 69/355 (19%)

Query: 68  FKAFIVKRGRQYA---NDEEIKERFEYFKQDGHK--------KHERYGTSEFSDRSPEEI 116
            K   +K  R+YA     EE   R++ FK +  K        K E +G ++FSD +PEE 
Sbjct: 29  MKKLFIKFSRKYAKVYGTEEHNNRYQIFKANVEKSRYYNHVGKRENFGITKFSDLTPEEF 88

Query: 117 ----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
               L KT   ++    ++I+A  +       EV+     P ++DWR+        +Q A
Sbjct: 89  KRMFLMKT---YTPEEAKKILAAPQHAVLSEKEVQ---TAPTSFDWRQHGAVTRVKNQGA 142

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCW FS  G                        +EGQ+AIK GKLV  S+ QLV+C  
Sbjct: 143 CGSCWTFSTTGN-----------------------VEGQWAIKKGKLVSLSEQQLVDCDH 179

Query: 233 QC----------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            C          SGC+G     + +Y     GL++E  YPY+   G    C ++KS V  
Sbjct: 180 NCVTYQNQQACDSGCNGGLMWSAFQYVIKNGGLDTEDSYPYE---GVDDTCRFNKSNVAA 236

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
                    +    M   L   GP+S+ +N++ +  Y  T    +   C+P DL H VL+
Sbjct: 237 TISSWTSISSDENQMAAWLAANGPISIAINAEWLQYY--TSGISDPWFCNPQDLDHGVLI 294

Query: 342 VGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VGYG        ++N  YW+V+NSWG    ++G+F+I RG   CG+  +   + +
Sbjct: 295 VGYGVGKSWLGSEEN--YWIVKNSWGSDWGEDGYFRIIRGKGKCGLNSVPSSSIV 347


>gi|74229746|ref|YP_308950.1| cathepsin [Trichoplusia ni SNPV]
 gi|72259660|gb|AAZ67431.1| cathepsin [Trichoplusia ni SNPV]
          Length = 344

 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 166/348 (47%), Gaps = 55/348 (15%)

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEF 108
           L ++ E   + F+ F  K  + YA+D E   R++ FK        ++       Y  ++F
Sbjct: 36  LQYNLERAPQYFETFQTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKF 95

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTG 165
           +D +  E++ K         +  +      ++     +  DGP     + +DWR+ N   
Sbjct: 96  ADLTKNEVIAK---------FTGLGVKSPNLKNFCDPLIVDGPSKYTQETFDWRQFNKIT 146

Query: 166 PAGDQAACGSCWAFS-IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
              DQ  CGSCWAFS IAG                        LE QYAIK  + ++ S+
Sbjct: 147 SVKDQGFCGSCWAFSTIAG------------------------LESQYAIKYNEHIDLSE 182

Query: 225 SQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
            QLV+C     GC G     + E      G+E E+DYPY++  G    C  +  K ++  
Sbjct: 183 QQLVDCDTIDMGCAGGLLHTAYEEIMSMGGVEYEEDYPYRSVQG---PCRIENDKFQVSV 239

Query: 284 GKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
              + +   SE  +K +L++ GP++V +++  + DY G  I     +C  Y L HAVLLV
Sbjct: 240 DNCYRYILYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGIIT----SCKNYGLNHAVLLV 295

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           GYG ++ IP+W+++NSWG    + GF +++R  N+CG I ++A  A I
Sbjct: 296 GYGTENGIPFWVLKNSWGTDYGENGFVRVKRNVNSCGMINELAASARI 343


>gi|72389847|ref|XP_845218.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389849|ref|XP_845219.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389851|ref|XP_845220.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389857|ref|XP_845223.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359926|gb|AAX80351.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359927|gb|AAX80352.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359928|gb|AAX80353.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359931|gb|AAX80356.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801753|gb|AAZ11659.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801754|gb|AAZ11660.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801755|gb|AAZ11661.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801758|gb|AAZ11664.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C    SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|72389855|ref|XP_845222.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389865|ref|XP_845227.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389867|ref|XP_845228.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359930|gb|AAX80355.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359935|gb|AAX80360.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359936|gb|AAX80361.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801757|gb|AAZ11663.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801762|gb|AAZ11668.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801763|gb|AAZ11669.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C    SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|340053971|emb|CCC48265.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 389

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 152/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGTCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSE 294
            F + + E+    +   + + K YPY + +G K  C  Y        TG  D  H    +
Sbjct: 184 GFMDNAFEWIVKENSGKVYTGKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q+A  A +
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQCLVAQLASSAVV 332


>gi|114679921|ref|YP_758371.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
 gi|39598652|gb|AAR28838.1| cathepsin [Leucania separata nuclear polyhedrosis virus]
          Length = 359

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 164/345 (47%), Gaps = 45/345 (13%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDR 111
           ++ + + + F+ F+    R Y +  E ++R+E F Q+         K    Y  ++FSD 
Sbjct: 45  YEPDRMRDYFERFVRDYNRTYIDSVEREQRYETFVQNLKNINRLNQKSQASYDINKFSDL 104

Query: 112 SPEEILCK-TGF--KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
           + +E++ + TG     +   Y      + ++ K+++     G VPD WDWR         
Sbjct: 105 TKDEVVARFTGLDPSLAAAAYTDNNGTQYQLCKVVVVDGTPGRVPDLWDWRNSQKVTSVK 164

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
            Q  CGSCWAF+                           +E QYAI+  +L++ S+ QLV
Sbjct: 165 QQGVCGSCWAFASVAN-----------------------IESQYAIRHDRLLDLSEQQLV 201

Query: 229 ECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGK 285
           +C +   GC G     +  E     GLESE  YPY+   G  + C  +  K  VKL    
Sbjct: 202 DCDQIDQGCSGGLMHLAFQEILQMGGLESELVYPYQ---GVDYACRLNPRKFDVKLSDCH 258

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
            +        +++++Y  GP++V ++   I DY    +      C+   L HAVLLVG+G
Sbjct: 259 RY-DLRDERKLRELVYTVGPIAVAIDCIDIIDYKSGIV----SMCNNNGLNHAVLLVGFG 313

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
            + + PYW+++NSWG    ++G+F+++R  N CG + ++A  AT+
Sbjct: 314 IEFDTPYWILKNSWGNDWGEKGYFRLKRNINGCGMMNELAASATV 358


>gi|72389853|ref|XP_845221.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359929|gb|AAX80354.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801756|gb|AAZ11662.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C    SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|118485796|gb|ABK94746.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 168/386 (43%), Gaps = 78/386 (20%)

Query: 27  VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIK 86
           VAS +    L D +  QVV+  +          D  N    F +F  K G+ YA  EE  
Sbjct: 19  VASTVSSNDLDDPLIRQVVSDGED---------DLLNAEHHFTSFKSKFGKTYATQEEHD 69

Query: 87  ERFEYFKQD--GHKKHE------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 138
            RF  FK +    KKH+       +G ++FSD +P+E   +  F   +R + R+  D  K
Sbjct: 70  YRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEF--RRQFLGLKR-WLRLPTDANK 126

Query: 139 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
              +         +P  +DWR         DQ +CGSCW+FS  G               
Sbjct: 127 APILPTT-----DLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATG--------------- 166

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYT 249
                    LEG + + TG+L   S+ QLV+C  +C         SGCDG     + EY 
Sbjct: 167 --------ALEGAHYLATGELASLSEQQLVDCDHECDPEEYGACDSGCDGGLMNNAFEYA 218

Query: 250 HQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSV 308
            +AG LE E DYPY   +G    C +DKSKV        +     + +   L K+GPLSV
Sbjct: 219 LKAGGLEREADYPYTGTDGGT--CKFDKSKVVASVSNFSVVSIDEDQIAANLVKHGPLSV 276

Query: 309 LLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYGKQ-------DNIPYWLVRN 357
            +N+  +  Y G           PY       H VLLVGYG            P+W+++N
Sbjct: 277 AINAAFMQTYVGG-------VSCPYICSKRQDHGVLLVGYGSAGYAPIRFKEKPFWIIKN 329

Query: 358 SWGPIGPDEGFFKIERGNNACGIEQI 383
           SWG    + G++KI RG N CG++ +
Sbjct: 330 SWGQNWGENGYYKICRGRNICGVDSM 355


>gi|13625989|gb|AAK35220.1|AF362769_1 pre-procathepsin L [Paragonimus westermani]
          Length = 235

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/241 (35%), Positives = 117/241 (48%), Gaps = 31/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P + DWRKK   GP   Q +CGSCWAFS+                          +EGQ
Sbjct: 22  APASVDWRKKGAVGPVEHQGSCGSCWAFSVTAN-----------------------VEGQ 58

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +KTG+LV  SK QLV+C +   GC G +  P   Y       GLE +  YPY    G 
Sbjct: 59  WFLKTGRLVSLSKQQLVDCDRLDHGCSGGY--PPYTYKEIKRMGGLELQSAYPY---TGW 113

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
           +  C  D+SK+        +     E     L ++GP+S  LN+  +  Y    +  ++ 
Sbjct: 114 EQACRLDRSKLFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGPLQFYRYGILHPSEY 173

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP  L HAVL VGY  +  +PYW VRNSWG    + G+F+I RG+  CGI+++   A 
Sbjct: 174 ACSPEGLNHAVLTVGYDTERGVPYWTVRNSWGTRWGENGYFRIYRGDGTCGIDRLTTSAI 233

Query: 389 I 389
           I
Sbjct: 234 I 234


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 164/341 (48%), Gaps = 52/341 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHE------RYGTSEFSDRSP 113
           E +  F V+  + Y N  E ++RF  F+      ++ + K++      + G ++F+D + 
Sbjct: 21  EEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFADLTE 80

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E     G   S ++       R +V   L  V+    +P  +DWR+K       DQ +C
Sbjct: 81  KEFSDMLGISRSTKS------SRPRVIHSLTPVK---DLPSKFDWREKGAVTEVKDQGSC 131

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW+FS  G                        +EG Y +KTGKLV  S+  LV+CAK+
Sbjct: 132 GSCWSFSTTG-----------------------TVEGAYFLKTGKLVSLSEQNLVDCAKE 168

Query: 234 -CSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHF 290
            C GC G + + ++EY   AG + SE DYPY+   G   KC +D SKV    +   ++  
Sbjct: 169 DCYGCSGGYMDKALEYIETAGGIMSENDYPYE---GIDDKCRFDSSKVAAKISNFTYIKK 225

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDN 349
           N  + +K  +   GP+SV +++        + I  +    S ++ L H VL+VGYG +  
Sbjct: 226 NDEDDLKNAVIAKGPISVAIDASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTEKE 285

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             YW+V+NSWG     +G+  + R  NN CGI   A Y TI
Sbjct: 286 QDYWIVKNSWGADWGMDGYIWMSRNKNNQCGIATDATYPTI 326


>gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 377

 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 157/342 (45%), Gaps = 62/342 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEILCK 119
           F  F  K G+ YA+ EE   RF  FK +  +  +H+       +G ++FSD +P E   +
Sbjct: 60  FSVFKQKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDPSATHGVTQFSDLTPSEF--R 117

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F         + AD  K   +      DG +P  +DWR K       +Q +CGSCW+F
Sbjct: 118 RSFLGLRSRRLGLPADANKAPIL----PTDG-LPTDFDWRDKGAVSEVKNQGSCGSCWSF 172

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 173 SATG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEK 209

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT ++G L  E+DYPY     ++  C +DKSK+        + 
Sbjct: 210 GSCDSGCNGGLMNSAFEYTLKSGGLMKEQDYPYTGT--DRGTCKFDKSKIAASVANFSVV 267

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG--- 345
               E +   L K GPL+V +N+  +  Y  G         CS + L H VLLVGYG   
Sbjct: 268 SLDEEQIAANLVKNGPLAVAINAVFMQTYIKGVSC---PYICSKH-LDHGVLLVGYGSDG 323

Query: 346 ----KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
               +  + PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 324 YAPIRLKDKPYWIIKNSWGANWGENGYYKICRGRNICGVDSM 365


>gi|343417244|emb|CCD20093.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 454

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 151/335 (45%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DW +K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWGRKGAVTPVKDQGTCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDTKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGK-DFLHFNGSE 294
              + + E+    +   + +EK YPY +  GE+  C     KV    TG  D  H    +
Sbjct: 184 GLMDNAFEWIVKENSGKVYTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSW     ++G+ +IE+G N C + Q A  A +
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQCLVAQRASSAVV 332


>gi|357148994|ref|XP_003574963.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 377

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 168/365 (46%), Gaps = 71/365 (19%)

Query: 53  IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RY 103
           + G+   DN+  L + F +F+ + G+ Y + EE   R   FK +    ++H+       +
Sbjct: 37  VGGADGDDNDLELSSHFTSFVQRFGKTYKDAEEHAHRLSVFKANLRRARRHQLLDPSAEH 96

Query: 104 GTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           G ++FSD +P E      G K S R++ R +        +L     DG +PD +DWR   
Sbjct: 97  GITKFSDLTPAEFRRTFLGLKTSRRSFLREIGGSAHDAPVL---PTDG-LPDDFDWRDHG 152

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  +Q +CGSCW+FS +                       G LEG   + TGK+   
Sbjct: 153 AVGPVKNQGSCGSCWSFSAS-----------------------GALEGANYLATGKMEVL 189

Query: 223 SKSQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKC 272
           S+ Q V+C  +C         +GC+G     +  Y     GLE EKDYPY   +G    C
Sbjct: 190 SEQQFVDCDHECDPEEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGRDG---TC 246

Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
            +DKSK+        +     E +   L K+GPL++ +N+  +  Y G           P
Sbjct: 247 KFDKSKIVASVQNFSVVSVDEEQIAANLVKHGPLAIGINAAYMQTYIGG-------VSCP 299

Query: 333 Y----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA---C 378
           Y     L H VLLVGYG       +  N PYW+++NSWG    ++G++KI RG+N    C
Sbjct: 300 YICGRSLDHGVLLVGYGASGFAPSRLKNKPYWVIKNSWGENWGEKGYYKICRGSNVRNKC 359

Query: 379 GIEQI 383
           G++ +
Sbjct: 360 GVDSM 364


>gi|426369382|ref|XP_004051670.1| PREDICTED: cathepsin F [Gorilla gorilla gorilla]
          Length = 517

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 150/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 216 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 275

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +   E   KM          P  WDWR K       DQ  CG
Sbjct: 276 EF---------RTIYLNSLLREEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 326

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 327 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 363

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++         
Sbjct: 364 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVELSQ 418

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 419 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 478

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ + RG+ ACG+  +A  A +D
Sbjct: 479 FWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 517


>gi|330376140|gb|AEC13302.1| cathepsin H [Gallus gallus]
          Length = 329

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 155/336 (46%), Gaps = 53/336 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILC 118
           + FKA++++ GR+Y   E  +    +     H +    G S       +FSD +  E   
Sbjct: 27  QLFKAWMLQHGRRYGAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF-- 84

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 177
           K  + WSE   +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW
Sbjct: 85  KKLYLWSEP--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCW 136

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE   AI TGKL+  ++  LV+CA+  +  
Sbjct: 137 TFSTTG-----------------------CLESAIAIATGKLLSLAEQLLVDCAQAFNNH 173

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G     + EY  +  GL  E  YPY+  NG    C +   K   F  KD ++    +
Sbjct: 174 GCSGGLPSQAFEYILYNKGLMGEDAYPYRAQNG---TCKFQPDKAIAFV-KDVINITQYD 229

Query: 295 T--MKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              M + + K+ P+S    + SD +H   G       E  +P  + HAVL VGYG++D  
Sbjct: 230 EAGMVEAVGKHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVLAVGYGEEDGR 288

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           PYW+V+NSWGP+   +G+F IERG N CG+   A Y
Sbjct: 289 PYWIVKNSWGPLWGMDGYFLIERGKNMCGLAACASY 324


>gi|1134882|emb|CAA92583.1| cysteine protease [Pisum sativum]
          Length = 350

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 155/340 (45%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENLELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 176
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE  YA   GK +  S+ QLV+CA   + 
Sbjct: 158 WTFSTTGA-----------------------LESAYAQAFGKNISLSEQQLVDCAGAFNN 194

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNG 292
            GC G     + EY  +  GLE+E+ YPY  +NG  KF+  +   KV    G   +    
Sbjct: 195 FGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGA 251

Query: 293 SETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGYG +D 
Sbjct: 252 EDELKHAIAFARPVSVAF--EVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDG 309

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           IPYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 310 IPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|73983670|ref|XP_540846.2| PREDICTED: cathepsin W [Canis lupus familiaris]
          Length = 374

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 159/356 (44%), Gaps = 62/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           + F  F ++  R Y+N EE   R + F  +  +  +          +G + FSD + EE 
Sbjct: 40  QVFALFQIQYNRSYSNPEEYARRLDIFAHNLAQAQQLEDEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       ++R+  +   V + +   E   PVP   DWRK   +  P   Q  C  
Sbjct: 100 GQFYG-------HQRMAGEAPSVGRKVESEEWGEPVPPTCDWRKLPGIISPIKQQGNCRC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I+  + VE S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IEALWGIRYHQPVEVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  I   + +GL S KDYP+   N +  +C   K K K+   +DF+   G+E
Sbjct: 190 GCKGGFTWDAFITVLNNSGLASAKDYPFL-GNTKPHRCLAKKYK-KVAWIQDFIMLQGNE 247

Query: 295 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK  +    
Sbjct: 248 QAIAWYLATKGPITVTINMKLLQHYQKGVIQATHTTCDPQRVDHSVLLVGFGKSKSVAGK 307

Query: 350 --------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                         IPYW+++NSWG    +EG+F++ RGNN CGI +    A +D+
Sbjct: 308 QAEGGSSRPRPHHPIPYWILKNSWGAEWGEEGYFRLHRGNNTCGITKYPVTARVDL 363


>gi|301784869|ref|XP_002927853.1| PREDICTED: cathepsin F-like [Ailuropoda melanoleuca]
          Length = 394

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 154/342 (45%), Gaps = 55/342 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           ++  FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 93  MVSIFKEFVTTYNRTYESKEEAEWRMSVFSNNVMRAQKIQALDRGTAQYGITKFSDLTEE 152

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +    + +KM +        P  WDWR K       DQ  CG
Sbjct: 153 EF---------RTIYLNPLLRENRGKKMDLAKSIGDSAPPEWDWRNKGAVTQVKDQGMCG 203

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +K G L+  S+ +L++C K  
Sbjct: 204 SCWAFSVTGN-----------------------VEGQWFLKRGALLSLSEQELLDCDKVD 240

Query: 235 SGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+      GLE+E DY Y+   G    C++   K +++         
Sbjct: 241 KACLGGL--PSNAYSAIKTLGGLETEDDYSYR---GHVQTCSFSSKKARVYINDSVELSQ 295

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             + +   L + GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG + 
Sbjct: 296 NEQKLVAWLAQNGPISVAINAFGMQFYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRS 352

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 353 GIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVD 394


>gi|14422331|emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
          Length = 350

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 155/340 (45%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKRYDSVDEMKLRFKIFSENIELIRSSNKRRLSYKLGVNHFAD-------- 101

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 176
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ +CGSC
Sbjct: 102 ---WTWEEFRSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSGVKDQGSCGSC 157

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE  YA   GK +  S+ QLV+CA   + 
Sbjct: 158 WTFSTTGA-----------------------LESAYAQAFGKNISLSEQQLVDCAGAFNN 194

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNG 292
            GC G     + EY  +  GLE+E+ YPY  +NG  KF+  +   KV    G   +    
Sbjct: 195 FGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSNGLCKFRSEHVAVKV---LGSVNITLGA 251

Query: 293 SETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGYG +D 
Sbjct: 252 EDELKHAIAFARPVSVAF--EVVHDFRLYKSGVYTSTACGSTPMDVNHAVLAVGYGIEDG 309

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           IPYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 310 IPYWLIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|18399697|ref|NP_565512.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
 gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor
 gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana]
 gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana]
 gi|330252083|gb|AEC07177.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
          Length = 361

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 174/406 (42%), Gaps = 92/406 (22%)

Query: 13  KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 72
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 73  VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 119
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TGKLV  S+ QLV+C  +C     
Sbjct: 160 STTG-----------------------ALEGAHFLATGKLVSLSEQQLVDCDHECDPEEE 196

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT    GL  EKDYPY   +G    C  D+SK+        + 
Sbjct: 197 GSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGS--CKLDRSKIVASVSNFSVV 254

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 255 SINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVLLVGYG 307

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
                  +    PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 308 SAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353


>gi|167833701|gb|ACA02577.1| cathepsin [Spodoptera frugiperda MNPV]
          Length = 340

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 161/338 (47%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 119
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 43  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 102

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 103 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 151

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CWAF  AG                      G LE QYAIK  +L++ ++ QLV+C    
Sbjct: 152 ACWAF--AG---------------------LGALESQYAIKYDRLIDLAEQQLVDCDFVD 188

Query: 235 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E      G+E E DYPYK    E+  CA    K        + +    
Sbjct: 189 MGCDGGLIHTAYEQIMRMGGVEQEFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMN 245

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG ++N+PY
Sbjct: 246 EERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCKNNGLNHAVLLVGYGVENNVPY 301

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 302 WIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 339


>gi|125860143|ref|YP_001036312.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|120969288|gb|ABM45731.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|319997353|gb|ADV91251.1| V-CATH [Spodoptera frugiperda MNPV]
 gi|384087478|gb|AFH58958.1| v-cath [Spodoptera frugiperda MNPV]
          Length = 339

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 161/338 (47%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 119
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D +  EI+ +
Sbjct: 42  FEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNEIVIR 101

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  E        V  DGP     P  +DWR  N      DQ  CG
Sbjct: 102 HTG-----------LASGELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCG 150

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CWAF  AG                      G LE QYAIK  +L++ ++ QLV+C    
Sbjct: 151 ACWAF--AG---------------------LGALESQYAIKYDRLIDLAEQQLVDCDFVD 187

Query: 235 SGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E      G+E E DYPYK    E+  CA    K        + +    
Sbjct: 188 MGCDGGLIHTAYEQIMRMGGVEQEFDYPYK---AERQPCALKPHKFAAGVRNCYRYVLMN 244

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG ++N+PY
Sbjct: 245 EERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCKNNGLNHAVLLVGYGVENNVPY 300

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 301 WIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 338


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 56/340 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK-------------QDGHKKHERYGTSEFSDRS 112
           + F+AF +K+ + Y    E   R+  F+             + G + +++ G ++FSD +
Sbjct: 21  DAFQAFKLKQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLETYKK-GVNKFSDWT 79

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
            +E             Y  +     K+ K +  V+    VP + DWR +       +Q  
Sbjct: 80  QDEF----------NAYLGLHPKPAKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGD 129

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS+ G                        +EG     TGKLV  S+ QLV+C  
Sbjct: 130 CGSCWAFSLTGS-----------------------VEGALFKSTGKLVSLSEQQLVDCTY 166

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
                GCDG + E +  Y  + GLE+E  YPYK  +G    C +D SKV +    D++++
Sbjct: 167 GTVNFGCDGGYLEETFPYIQETGLEAEASYPYKARDG---TCKFDASKV-VTKINDYVYW 222

Query: 291 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            G E  + +     GP+SV ++++ I  Y       +   CS  DL H VL+VGYG ++ 
Sbjct: 223 YGDEEALLEATATIGPISVAMDANYIDSYASGVF--SSRLCSSDDLNHGVLVVGYGSENG 280

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           + YWLV+NSW     + G+ K+ RG N CGI +   Y  +
Sbjct: 281 VNYWLVKNSWAEDWGESGYLKLLRGQNECGIAEDDSYPIV 320


>gi|443696723|gb|ELT97360.1| hypothetical protein CAPTEDRAFT_147978 [Capitella teleta]
          Length = 274

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 42/302 (13%)

Query: 94  QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
           Q+  +    YG S F+D + EE      F+ +  +    V     ++   + +E     P
Sbjct: 8   QEKEQGDATYGASPFADLTAEE------FRKNYLSPVWNVTHDPFLKPASIPIETP---P 58

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
           DA+DWR  +   P  +Q +CGSCWAFS+ G                        +EGQ+A
Sbjct: 59  DAFDWRDHDAVTPVKNQGSCGSCWAFSVTGN-----------------------VEGQWA 95

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKC 272
           I+  KL+  S+ +LV+C K   GC+G    +   E     GLE+EKDYPY+   G+  KC
Sbjct: 96  IQKKKLLSLSEQELVDCDKVDLGCNGGLPLQAYKEIMRIGGLETEKDYPYE---GKGDKC 152

Query: 273 AYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
            ++K++V++  TG   +  N  + MK  L+K GP+S+ LN++ +  Y G         CS
Sbjct: 153 VFEKAEVEVNITGAVNISSN-EDDMKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCS 211

Query: 332 PYDLGHAVLLVGYG-KQ---DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
           P  L H VL+ GYG KQ    + P+W ++NSWG    ++G++ + RG   CG+ Q+   A
Sbjct: 212 PSSLDHGVLITGYGIKQGWMSDSPFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTSA 271

Query: 388 TI 389
           T+
Sbjct: 272 TV 273


>gi|343471272|emb|CCD16264.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 154/343 (44%), Gaps = 51/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE+  +  +    + Y   +    KV  +       G  P A DWRKK    P  DQ  C
Sbjct: 95  EEL--RATYLNGAKYYAAALKRPRKVVNV-----STGKAPPAVDWRKKGAVTPVKDQRKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSATGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDNM 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G   + ++++   +++  + +E+ YPY + +G+   C       K+   K   H 
Sbjct: 185 DDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPCNMSG---KVVGAKISGHI 241

Query: 291 N---GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           N       + + L K GP+++ +++    DY G  +     +CS   L H VLLVGY   
Sbjct: 242 NLPKDENAIAEWLAKNGPVAIAVDASSFLDYKGGVL----TSCSSDALNHDVLLVGYDDT 297

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 298 SKPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340


>gi|77628008|ref|NP_001029282.1| cathepsin F precursor [Rattus norvegicus]
 gi|71681040|gb|AAH99780.1| Cathepsin F [Rattus norvegicus]
 gi|149062007|gb|EDM12430.1| cathepsin F, isoform CRA_a [Rattus norvegicus]
 gi|159895422|gb|ABX09995.1| cathepsin F [Rattus norvegicus]
          Length = 462

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 150/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM +    +   P  WDWRKK       DQ  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGGKMSLAKSINDLAPPEWDWRKKGAVTEVKDQGMCGSCWA 275

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 276 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKMDKACM 312

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  YT   +  GLE+E DY Y+   G    C +     K++             
Sbjct: 313 GGL--PSNAYTAIKNLGGLETEDDYGYQ---GHVQACNFSTQMAKVYINDSVELSRDENK 367

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 368 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 427

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 428 KNSWGRDWGEEGYYYLYRGSGACGVNTMASSAVVN 462


>gi|343470378|emb|CCD16903.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 49/342 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDNM 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC G F + ++++   +++  + +E+ YPY + +G+   C  +KS KV        ++
Sbjct: 185 DYGCRGGFLDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLIN 242

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               E  + + L K GP+++ +++    DY G  +     +CS   L H VLLVGY    
Sbjct: 243 LPKDENAIAEWLAKNGPIAIAVDASSFLDYTGGVL----TSCSSDALNHGVLLVGYDDSS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 299 KPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340


>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 366

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 159/360 (44%), Gaps = 73/360 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 114
           N    F AF  K  + YA  EE   RF  FK +    K H++      +G + FSD +P 
Sbjct: 46  NAEHHFSAFKTKFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPS 105

Query: 115 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E   +  G K       R+ +D +K       +     +P  +DWR         +Q +C
Sbjct: 106 EFRGQFLGLK-----PLRLPSDAQKAP-----ILPTSDLPTDFDWRDHGAVTGVKNQGSC 155

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW+FS  G                        LEG + + TG LV  S+ QLV+C  +
Sbjct: 156 GSCWSFSAVGA-----------------------LEGAHFLSTGGLVSLSEQQLVDCDHE 192

Query: 234 C---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           C         SGC+G     + EYT +AG L  E+DYPY     ++  C +DKSK+    
Sbjct: 193 CDPEERGACDSGCNGGLMTTAFEYTLKAGGLMREEDYPYTGR--DRGPCKFDKSKIAASV 250

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAV 339
               +     E +   L K GPL+V +N+  +  Y G           PY     L H V
Sbjct: 251 ANFSVVSLDEEQIAANLVKNGPLAVGINAVFMQTYIGG-------VSCPYICGKHLDHGV 303

Query: 340 LLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ-IAGYATIDV 391
           LLVGYG       +    PYW+++NSWG    +EG++KI RG N CG++  ++  A I V
Sbjct: 304 LLVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAAIHV 363


>gi|291230041|ref|XP_002734978.1| PREDICTED: cysteine proteinase inhibitor-like [Saccoglossus
           kowalevskii]
          Length = 352

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 166/391 (42%), Gaps = 56/391 (14%)

Query: 14  AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           AI+ + AVFL         +   T  IT   V  +D +    + +   +   + F+ F+ 
Sbjct: 2   AILTLIAVFLSTVALGSQAIGPRT--ITINNVPMIDEIERNTNESGSVDKTQDLFQDFMK 59

Query: 74  KRGRQYANDEEIKERFEYFKQDGHKKHER----------YGTSEFSDRSPEEILCKTGFK 123
              ++Y  +EE + R++ F QD   K ER          YG ++F D S EE        
Sbjct: 60  TYDKKYDTEEEHQLRYQIF-QDNLLKAERLQQTEQATGQYGVTKFMDLSEEEF------- 111

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK--KNVTGPAGDQAACGSCWAFSI 181
              R Y      R     M       G  P A+DWR   KN      +Q  CGSCWAFS 
Sbjct: 112 ---RKYYLTPVWRGSDPHMKKAEIPKGTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFST 168

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 241
            G                        +EGQ+ IK G LV  S+ +LV+C K   GC+G  
Sbjct: 169 TGN-----------------------IEGQWKIKKGTLVSLSEQELVDCDKLDQGCNGGL 205

Query: 242 FEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 298
             PS  Y       G+ SE DYPY    G    C  + +  K++             M  
Sbjct: 206 --PSNAYQEIMRFGGIMSEDDYPY---TGRDQDCKLNATLNKVYINGSMNISKDEGDMAS 260

Query: 299 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 358
            L   GP+S+ +N++ +  Y G         C+P +L H VL+VGYG +D  PYW+++NS
Sbjct: 261 WLAANGPISIGINANAMQFYFGGVSHPWKIFCNPENLDHGVLIVGYGTKDGTPYWIIKNS 320

Query: 359 WGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           WG     EG++ + RG   CG+ ++   A +
Sbjct: 321 WGRSWGVEGYYLVYRGGGVCGLNEMCTSAIV 351


>gi|161778780|gb|ABX79341.1| cysteine protease [Vitis vinifera]
          Length = 377

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 168/379 (44%), Gaps = 79/379 (20%)

Query: 38  DRITDQVVARVDTLAIEGSLTFDNENILET----FKAFIVKRGRQYANDEEIKERFEYFK 93
           D I  QVV  +    +EG    + EN+L      F  F  + G+ YA+ EE   RF+ FK
Sbjct: 33  DIIIRQVVPELGD--VEGG---EEENLLTADHHHFSIFKRRFGKSYASQEEHDYRFKVFK 87

Query: 94  QD--GHKKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 145
            +    ++H++      +G ++FSD +P E            TY  +   +   +     
Sbjct: 88  ANLRRARRHQQLDPSATHGVTQFSDLTPAEF---------RGTYLGLRPLKLPHDAQKAP 138

Query: 146 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFP 205
           +     +P+ +DWR         +Q +CGSCW+FS  G                      
Sbjct: 139 ILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGA--------------------- 177

Query: 206 GMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LE 255
             LEG   + TG LV  S+ QLVEC  +C         SGC+G     + EYT +AG L 
Sbjct: 178 --LEGANFLATGNLVSLSEQQLVECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLM 235

Query: 256 SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI 315
            E+DYPY     ++  C +DK+K+        +     + +   L K GPL+V +N+  +
Sbjct: 236 KEEDYPYTGT--DRGSCKFDKTKIAASVSNFSVISLDEDQIAANLVKIGPLAVAINAVFM 293

Query: 316 HDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGP 364
             Y G           PY     L H VLLVGYG       +  + PYW+++NSWG    
Sbjct: 294 QTYVGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWG 346

Query: 365 DEGFFKIERGNNACGIEQI 383
           + GF+KI RG N CG++ +
Sbjct: 347 ENGFYKICRGRNVCGVDSM 365


>gi|118485910|gb|ABK94801.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 155/350 (44%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPE 114
           N    F +F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTSFKSKFGKTYATQEEHDYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPK 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   +  F   +R   R+  D  K   +         +P  +DWR         DQ +CG
Sbjct: 106 EF--RRQFLGLKRRL-RLPTDANKAPILPTT-----DLPTDYDWRDHGAVTEVKDQGSCG 157

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+L   S+ QLV+C  +C
Sbjct: 158 SCWSFSATG-----------------------ALEGAHYLATGELASLSEQQLVDCDHEC 194

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGCDG     + EY  +AG LE E+DYPY   +G    C +DKSKV     
Sbjct: 195 DPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGGT--CKFDKSKVVASVS 252

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVL 340
              +     + +   L K+GPLSV +N+  +  Y G           PY       H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGG-------VSCPYICSKRQDHGVL 305

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG            P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSM 355


>gi|51969854|dbj|BAD43619.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 174/406 (42%), Gaps = 92/406 (22%)

Query: 13  KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 72
           + +  +  +F+   V+ C     L  ++ D+   +V  L+ E           + F  F 
Sbjct: 6   RVLFSVSLIFVFVSVSVCGDEDVLIRQVVDETEPKV--LSSE-----------DHFTLFK 52

Query: 73  VKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----ILCK 119
            K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     +  K
Sbjct: 53  KKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVK 112

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
            GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 113 GGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCWSF 159

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TGKLV  S+ QLV+C  +C     
Sbjct: 160 STTGA-----------------------LEGAHFLATGKLVSLSEQQLVDCDHECDPEEE 196

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT    GL  EKDYPY   +G    C  D+SK+        + 
Sbjct: 197 GSCDSGCNGRLMNSAFEYTLKTGGLMREKDYPYTGTDGGS--CKLDRSKIVASVSNFSVV 254

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 255 SINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVLLVGYG 307

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
                  +    PYW+++NSWG    + GF+KI +G N CG++ + 
Sbjct: 308 SAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLV 353


>gi|94556727|gb|ABF46642.1| papain-like cysteine proteinase [Pachysandra terminalis]
          Length = 374

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 173/401 (43%), Gaps = 67/401 (16%)

Query: 9   VLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 68
           +L +  ++L  +  +    AS +      D +  QVVA  D    +  L     +    F
Sbjct: 3   LLSRFVLLLFSSSLVFAATASTVSSDESDDLLIRQVVAGADDHDNDDLLLNAEHH----F 58

Query: 69  KAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKT 120
            +F  + G+ Y + +E   RF  FK +  +            +G ++F D +P E     
Sbjct: 59  SSFKKRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDPSAVHGVTQFFDLTPAEF---- 114

Query: 121 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
                 RTY  +   R   +     +     +P  +DWR      P  +Q +CGSCW+FS
Sbjct: 115 -----RRTYLGLKRLRLPADTHEAPILPTNDLPADFDWRDHGAVTPVKNQGSCGSCWSFS 169

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 234
             G                        LEG   + TGKLV  S+ QLV+C   C      
Sbjct: 170 ATGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHVCDSEDPS 206

Query: 235 ---SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              SGC+G     + EYT +AG LE E+DYPY   +  K  C +DK+K+ + +  +F   
Sbjct: 207 SCDSGCNGGLMTSAFEYTLKAGGLEREEDYPYTGTDHSK--CKFDKTKIAV-SASNFSVV 263

Query: 291 NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-- 347
           +  E  +   L   GPL++ +N+  +  Y G         CS   L H VLLVGYG    
Sbjct: 264 SLDENQIAANLVTNGPLAIGINAMFMQTYIGGV--SCPYICSKRLLDHGVLLVGYGSAGF 321

Query: 348 -----DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                   PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 322 APIRFKEKPYWIIKNSWGESWGEKGYYKICRGRNICGMDSM 362


>gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
 gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
          Length = 366

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 158/350 (45%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F  F  + G+ YA+DEE   R   FK +    K+H++      +G ++FSD +P 
Sbjct: 44  NADHHFAVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQQLDPAAVHGVTQFSDLTPT 103

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   K  F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG
Sbjct: 104 EFRRK--FLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCG 155

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 156 SCWSFSTTGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT +AG L  E+DYPY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV--CRFDKTKIAAKVA 250

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|18420375|ref|NP_568052.1| cysteine proteinase RD19a [Arabidopsis thaliana]
 gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags:
           Precursor
 gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]
 gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|332661616|gb|AEE87016.1| cysteine proteinase RD19a [Arabidopsis thaliana]
          Length = 368

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 156/353 (44%), Gaps = 69/353 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCK 119
           F  F  K G+ YA++EE   RF  FK +    ++H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 163 SATG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEA 199

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT    GL  E+DYPY   +G+   C  DKSK+        + 
Sbjct: 200 DSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKT--CKLDKSKIVASVSNFSVI 257

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               E +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 258 SIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVLLVGYG 310

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                  +    PYW+++NSWG    + GF+KI +G N CG++ +       V
Sbjct: 311 AAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|113603|sp|P05167.1|ALEU_HORVU RecName: Full=Thiol protease aleurain; Flags: Precursor
 gi|19021|emb|CAA28804.1| aleurain [Hordeum vulgare]
          Length = 362

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 161/366 (43%), Gaps = 57/366 (15%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 99
           +TD+  + +++ A+ G+L      +   F  F V+ G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVRYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 100 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 149
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +P+  DWR+  +  P  +QA CGSCW FS  G                        LE
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGA-----------------------LE 178

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNAN 266
             Y   TGK +  S+ QLV+CA   +  GC+G     + EY  +  G+++E+ YPYK  N
Sbjct: 179 AAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 238

Query: 267 GEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPI 323
           G    C Y  + + V++    + +  N  + +K  +    P+SV     D    Y     
Sbjct: 239 G---VCHYKAENAAVQVLDSVN-ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVY 294

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             +    +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N C I   
Sbjct: 295 TSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATC 354

Query: 384 AGYATI 389
           A Y  +
Sbjct: 355 ASYPVV 360


>gi|351693703|gb|AEQ59229.1| cysteine protease precursor [Clonorchis sinensis]
          Length = 327

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 46/349 (13%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 101
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  D+  CGSCWAFS  G                        +EGQ+  KT  L++
Sbjct: 124 GAVGPVLDKGDCGSCWAFSAVGN-----------------------IEGQWFRKTDNLLQ 160

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C +   GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK
Sbjct: 161 LSEQQLLDCDEVDEGCNGGTPQQAFKQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVK 217

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
           ++     +     +   ++L + GP S  LN+  +  Y    +      C    L HAVL
Sbjct: 218 VYINGSKILPEDEQIQAQMLKETGPFSSALNALSLQFYTEGILHPLPALCDAQSLNHAVL 277

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 278 TVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGPCGINTLVSTSII 326


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 157/346 (45%), Gaps = 55/346 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER----------YGTSEFSDRSP 113
           ET+K F    G+ Y   EE  +RF+ F+    +  +H R           G ++FSD S 
Sbjct: 52  ETWKEFKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQFSDMSH 111

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E L   G +   R Y        K E      +    + D  DWR K    P  +Q  C
Sbjct: 112 DEYLRHNGLRRGNRKYS-------KGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQC 164

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW+FS  G                        LEGQ+  +TGKL+  S+ QLV+C+  
Sbjct: 165 GSCWSFSTTGS-----------------------LEGQHFRQTGKLISLSEQQLVDCSGT 201

Query: 234 CS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLH 289
               GC+G   + + EY     GLE E DYPY    G   KC   KS  K   TG   + 
Sbjct: 202 FGNEGCNGGLMDNAFEYIKSIGGLEGEDDYPYTAKQG---KCHLKKSLFKANDTGCTDVE 258

Query: 290 FNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
               + +K  L   GP+SV +++       Y+G     ++E CS  +L H VL VGYG +
Sbjct: 259 SGDEDALKDALASVGPISVAIDASHASFQSYDGGVY--DEEECSSQNLDHGVLTVGYGTE 316

Query: 348 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDV 391
           +N   YWLV+NSWG +  +EG+ K+ R  +N CGI   A Y  + +
Sbjct: 317 ENGGDYWLVKNSWGEMWGEEGYIKMSRNKDNQCGIATQASYPNVQL 362


>gi|5881566|dbj|BAA84280.1| Cysteine proteinase [Clonorchis sinensis]
          Length = 232

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 124/262 (47%), Gaps = 42/262 (16%)

Query: 132 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQ 191
           +  D    E + M+ EK       +DWR+    GP  DQ  CGSCWAFS+ G        
Sbjct: 8   VSEDLTPEEDVTMDNEK-------FDWREHGAVGPVLDQGKCGSCWAFSVIGN------- 53

Query: 192 YLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-- 249
                           + GQ+  KTG L+  S+ QLV+C     GCDG +  P   YT  
Sbjct: 54  ----------------VVGQWFRKTGHLLALSEQQLVDCDYLDDGCDGGY--PPQTYTAI 95

Query: 250 -HQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLS 307
               GLE   DYPY    G    C  DKSK V    G   L  +     +K L   GPLS
Sbjct: 96  QKMGGLELASDYPYTGVGG---ICHMDKSKFVAYINGSTILPLSEKVQAQK-LRAIGPLS 151

Query: 308 VLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 367
             LN+D +  Y G  +R   + C P  + HAVL VGYG Q+  PYW+V+NSWG    +EG
Sbjct: 152 SALNADTLQLYKGGIMRP--KWCDPAGVNHAVLTVGYGVQNGKPYWIVKNSWGEDFGEEG 209

Query: 368 FFKIERGNNACGIEQIAGYATI 389
           +F+I RG+  CGI  I   A I
Sbjct: 210 YFRIYRGDGTCGINSIVTTAII 231


>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas]
          Length = 368

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 178/404 (44%), Gaps = 79/404 (19%)

Query: 10  LEKKAIMLIQAVFLLC-GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETF 68
           +E++ ++      LL   +AS      L D +  QVV   D   +      + E+   TF
Sbjct: 1   MERRCLISFLVYALLSFTIASTTSPDELDDPLIRQVVPDGDQDHL-----LNAEHHFTTF 55

Query: 69  KAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKT 120
           KA   K G+ YA  EE   RF+ FK +  +  KH+       +G + FSD +P E     
Sbjct: 56  KA---KFGKTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREF---- 108

Query: 121 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
                 R Y  +   R   +     +     +P  +DWR         +Q +CGSCW+FS
Sbjct: 109 -----RRQYLGLRRLRLPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFS 163

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC------ 234
            AG                        LEG + + TG+LV  S+ QLV+C  +C      
Sbjct: 164 AAGA-----------------------LEGAHFLATGELVSLSEQQLVDCDHECDPEEYG 200

Query: 235 ---SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              SGC+G     + EYT +AG LE E+DYPY     ++  C +D++K+        +  
Sbjct: 201 ACDSGCNGGLMTTAFEYTLKAGGLEREEDYPY--TGNDRGPCKFDRNKIVASVSNFSVVS 258

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYG- 345
              + +   L K+GPL+V +N+  +  Y G           PY       H VLLVGYG 
Sbjct: 259 IDEDQIAANLVKHGPLAVGINAVFMQTYMGG-------VSCPYICSKRQDHGVLLVGYGS 311

Query: 346 ------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                 +  + P+W+++NSWG    + G+++I RG N CG++ +
Sbjct: 312 AGYAPIRLKDKPFWIIKNSWGESWGENGYYRICRGRNICGVDAM 355


>gi|4972585|gb|AAD34707.1|AF071801_1 cysteine proteinase [Paragonimus westermani]
          Length = 229

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/241 (36%), Positives = 122/241 (50%), Gaps = 31/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P+  DWR+    GP  +Q +CGSCWAFS+AG                        +EGQ
Sbjct: 16  APERMDWREWGAVGPVENQGSCGSCWAFSVAGN-----------------------VEGQ 52

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKF 270
           + +KTG+LV  SK QLV+C     GC G +     +E     GLE + DYPY    G + 
Sbjct: 53  WFLKTGQLVSLSKQQLVDCDVMDYGCGGGWPTNAYMEIMRMGGLELQSDYPYV---GVQQ 109

Query: 271 KCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
           +C  +K K  L    D L   G+  E     L ++GPLS  LN+  +  Y       + E
Sbjct: 110 QCYLNKEK--LLAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNAGYLQFYQSGISHPSYE 167

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP  L HAVL VGY  ++ +PYW+++NSWG    + G+F++ RG+  CGI ++   A 
Sbjct: 168 ECSPASLNHAVLTVGYDTENGVPYWIIKNSWGTGWGENGYFRLYRGDGTCGINRMITSAI 227

Query: 389 I 389
           I
Sbjct: 228 I 228


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 173/404 (42%), Gaps = 93/404 (23%)

Query: 17  LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNE-----NILETFKAF 71
            I A+ L   VA+     S  D  TD  + R            DNE     N    F +F
Sbjct: 5   FIFAIVLFAAVAT----SSTDDTNTDDFIIR---------QVVDNEEDHLLNAEHHFTSF 51

Query: 72  IVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGFK 123
             K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E        
Sbjct: 52  KSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE-------- 103

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSCW 177
                + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSCW
Sbjct: 104 -----FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSCW 157

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC--- 234
           AFS  G                        LEG + + TGKLV  S+ QLV+C   C   
Sbjct: 158 AFSTTG-----------------------ALEGAHYLATGKLVSLSEQQLVDCDHVCDPE 194

Query: 235 ------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                 SGC+G     + EY  Q+G +  EKDY Y   +G    C +DKSKV        
Sbjct: 195 QAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNFS 251

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYGK 346
           +     E +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG+GK
Sbjct: 252 VVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFGK 308

Query: 347 Q-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                      PYW+V+NSWG    ++G++KI RG N CG++ +
Sbjct: 309 GAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSM 352


>gi|9635308|ref|NP_059206.1| ORF58 [Xestia c-nigrum granulovirus]
 gi|13124001|sp|Q9PYY5.1|CATV_GVXN RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|6175702|gb|AAF05172.1|AF162221_58 ORF58 [Xestia c-nigrum granulovirus]
          Length = 346

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 160/335 (47%), Gaps = 45/335 (13%)

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 108
           + +D  N  E F  F+VK  + Y +D+E + RFE FKQ+    + R        +  +  
Sbjct: 32  IAYDMSNAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSR 91

Query: 109 SDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           +D S  E+L K TG K S    E+           ++  +  G VPD++DWR +N     
Sbjct: 92  ADISSNELLQKLTGLKLSLMRGEK---KNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSV 148

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
             Q  CGSCWAFS                           +E  Y IK    ++ S+ QL
Sbjct: 149 KMQKECGSCWAFSAVAN-----------------------IESLYHIKHNVSLDLSEQQL 185

Query: 228 VECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 286
           V+C K  +GC+G     + E   +AG +  E  YPY   +G    C      V+L +G  
Sbjct: 186 VDCDKVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVDG---VCKNTTRYVQL-SGCY 241

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS-PYDLGHAVLLVGYG 345
                  + ++++L++ GP+SV ++   + +Y     +     CS  + L H VLLVGYG
Sbjct: 242 AYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKH----CSVDHGLNHGVLLVGYG 297

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           +++++ YW ++NSWG    ++GFF+I+R  N+CGI
Sbjct: 298 QENDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGI 332


>gi|355681647|gb|AER96812.1| cathepsin F [Mustela putorius furo]
          Length = 408

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 168/397 (42%), Gaps = 76/397 (19%)

Query: 29  SCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET--------------------- 67
           + LC   + D +   ++ R D   ++  +T D    L +                     
Sbjct: 52  TLLCSFEILDELGKHMLLRRDCGPVDTKVTDDKNETLSSVLPLLNKEPLPQDFSVKMASI 111

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 112 FKEFVTTYNRTYESKEETQWRMSVFSNNMMRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 169

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +    + + M ++       P  WDWR+K       +Q  CGSCWA
Sbjct: 170 -------RTIYLNPLLREYRGKNMRLDKSTGDSAPSEWDWRRKGAVTKVKNQGMCGSCWA 222

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +K G L+  S+ +L++C K    C 
Sbjct: 223 FSVTGN-----------------------VEGQWFLKQGALLSLSEQELLDCDKVDKACL 259

Query: 239 GCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+      GLE+E DY Y+   G    C +   K +++           ET
Sbjct: 260 GGL--PSNAYSAIKTLGGLETEDDYSYR---GRMQTCGFSPKKARVYINDSVELSQNEET 314

Query: 296 MKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           +   L + GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +   P+
Sbjct: 315 LAAWLAEKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSGTPF 371

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           W ++NSWG    +EG++ + RG+ ACG+  +A  A +
Sbjct: 372 WAIKNSWGSDWGEEGYYYLHRGSGACGVNTMASSAVV 408


>gi|194352746|emb|CAQ00101.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 178/389 (45%), Gaps = 74/389 (19%)

Query: 33  LPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYF 92
           L S T+ + D ++ +V     E  L  + E     F +F+ + G+ Y + +E + R   F
Sbjct: 26  LSSATEGLEDPLIEQVVGGDAENELELNAE---AHFASFVRRFGKSYRDADEHEHRLSVF 82

Query: 93  KQD--GHKKHER------YGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKML 143
           + +    ++H+R      +G ++FSD +P+E   +  G + S R++ + ++        L
Sbjct: 83  RANLRRARRHQRLDPSAVHGITKFSDLTPDEFRERFLGLRKSRRSFLKGISGSAHDAPAL 142

Query: 144 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLI 203
                DG +P  +DWR+    GP  DQ +CGSCW+FS +                     
Sbjct: 143 ---PTDG-LPTEFDWREHGAVGPVKDQGSCGSCWSFSTS--------------------- 177

Query: 204 FPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-G 253
             G LEG   + TGKL   S+ QLV+C  +C         +GC+G     +  Y  +A G
Sbjct: 178 --GALEGANYLATGKLEVLSEQQLVDCDHECDPSEPRACDAGCNGGLMTTAFSYLAKAGG 235

Query: 254 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS 312
           LE+EKDYPY    G    C +DKSK+     K+F      E  +   L K+GPL++ +N+
Sbjct: 236 LETEKDYPY---TGRNSACKFDKSKIAAQV-KNFSTVAIDEDQIAANLVKHGPLAIGINA 291

Query: 313 DLIHDYNGTPIRKNDETCSPYDLGH---AVLLVGYGKQ-------DNIPYWLVRNSWGPI 362
             +  Y G           PY  G     V LVGYG            PYW+++NSWG  
Sbjct: 292 VFMQTYIGG-------VSCPYICGRHLDHVFLVGYGSAGYAPLRFKEKPYWIIKNSWGEN 344

Query: 363 GPDEGFFKIERG---NNACGIEQIAGYAT 388
             + G++KI RG    N CG++ +    T
Sbjct: 345 WGESGYYKICRGPHVKNKCGVDSMVSTVT 373


>gi|7381219|gb|AAF61440.1|AF138264_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 172/392 (43%), Gaps = 73/392 (18%)

Query: 21  VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 80
           +FL   +A+   + +  D   D V+ R     + G    D  N    F  F  + G+ YA
Sbjct: 8   LFLCTLLATTSLVFAAEDDDGDDVLIR----QVVGDGDGDLLNADHHFTVFKRRFGKAYA 63

Query: 81  NDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCKTGFKWSERTYERI 132
           +DEE   R   FK +    K+H+       +G ++FSD +P E   +  F    R   + 
Sbjct: 64  SDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEF--RRKFLGLNRRL-KF 120

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
            AD  K   +L   E    +P  +DWR      P  +Q  CGSCW+FS  G         
Sbjct: 121 PAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGA-------- 167

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFE 243
                          LEG   + TGKLV  S+ QLV+C  +C         SGC+G    
Sbjct: 168 ---------------LEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMN 212

Query: 244 PSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 302
            + EYT +AG L  E+DYPY   + +   C +DK+K+        +     + +   L K
Sbjct: 213 SAFEYTLKAGGLMREEDYPYTGNDLQV--CRFDKTKIAAKVANFSVVSLDEDQIAANLVK 270

Query: 303 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDNIP 351
            GPL+V +N+  +  Y G           PY     L H VLLVGYG       +    P
Sbjct: 271 NGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKP 323

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           YW+++NSWG    + G++KI RG N CG++ +
Sbjct: 324 YWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|351710879|gb|EHB13798.1| Cathepsin F [Heterocephalus glaber]
          Length = 482

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 149/339 (43%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPE 114
           ++  FK F+    R Y + +E + R   F          Q       +YG ++FSD + E
Sbjct: 181 MISIFKNFVATYNRTYESKKEAQWRLSVFTRNMVLAQRIQALDHGTAQYGVTKFSDLTEE 240

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +   E  +KM +      P P  WDWRKK       +Q  CG
Sbjct: 241 EF---------RTIYLNPLLREEPGKKMHLAKAVRDPAPLEWDWRKKGAVTEVKNQGMCG 291

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 292 SCWAFSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKMD 328

Query: 235 SGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G F  PS  Y       GLE+E DY Y+   G    C +   K K++         
Sbjct: 329 KACMGGF--PSNAYLAIKSLGGLETEDDYSYQ---GHMKACNFSAKKAKVYINDSVELSK 383

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L   GP+SV +N+  +  Y           CSP+ + HA+L+VGYG + N+P
Sbjct: 384 NEQKLAAWLAVKGPISVAINAFGMQFYRHGIAHPLRPLCSPWFIDHAMLVVGYGNRSNVP 443

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    +EG++ + RG+ ACG+  +A  A +D
Sbjct: 444 FWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVVD 482


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 158/342 (46%), Gaps = 52/342 (15%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGH-------KKHER---YGTSEFSDRSPE 114
           L  F+ F    G+ Y  DE    +  + +   H       K   R    G ++F+D S  
Sbjct: 163 LTNFEHFKEHFGKTYEGDEHALRQGIFQRNLAHIEKFNAEKAASRGYTLGITQFADMSTA 222

Query: 115 EIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E      G + +  T    +A   K+++ ++  ++D  +P+A DWR K    P  DQ  C
Sbjct: 223 EFRQTYLGLRMNAST----IAKLRKLQREVVADDRD--LPEAVDWRDKGAVSPVKDQGQC 276

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS +G                        +EGQ+ +K G+L+  S+ Q+V+C+  
Sbjct: 277 GSCWAFSTSGA-----------------------IEGQHFLKNGELLSLSEQQMVDCSWL 313

Query: 234 CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDK-SKVKLFTGKDFLHFN 291
             GC+G     ++EY     GLE E  YPYK   G    C  DK S     TG     F 
Sbjct: 314 DFGCNGGQPMLAMEYVRFNGGLELETAYPYKGVGGS---CHSDKKSAAAKITGFWMAGFY 370

Query: 292 GSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               ++K + K GP+SV +++   D  H  +G     N E+CS   L HAVL VGYG  D
Sbjct: 371 SESALQKAVAKVGPISVGMDASGEDFQHYKSGI---YNPESCSSIGLDHAVLAVGYGTSD 427

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +  YWLV+NSW     ++G+FK+ R   N CGI     Y T+
Sbjct: 428 DGDYWLVKNSWNTSWGEKGYFKLPRNKGNKCGIATTPIYPTV 469


>gi|290984408|ref|XP_002674919.1| predicted protein [Naegleria gruberi]
 gi|284088512|gb|EFC42175.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 162/368 (44%), Gaps = 64/368 (17%)

Query: 55  GSLTFDNEN--------ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK------- 99
           G L FD E         + + F  F  K  R Y   EE + R + F+++           
Sbjct: 16  GILAFDQETYQPLSETAVRDHFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIRE 75

Query: 100 -HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 158
            +  YG ++FSD + +E   +  +   ++T + I          ++      P PD +DW
Sbjct: 76  GNNNYGITKFSDLTSDEF--RKFYLMEKKTPKEIQKMMRMDSNKMVSNSYAKPAPDHYDW 133

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R         DQ  CGSCWAFS  G                        +EG YAIK  +
Sbjct: 134 RNHGAITGVKDQGQCGSCWAFSAIGS-----------------------IEGSYAIKHKQ 170

Query: 219 LVEFSKSQLVECAKQC----------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANG 267
           LV FS+ QLV+C   C           GC+G     + +Y  +A G+ +EKDYPY     
Sbjct: 171 LVSFSEQQLVDCDNNCVTFENQQSCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYY---A 227

Query: 268 EKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           E++KC    +  V   +    L  N +E M   L + GP++V LN+D + +YN      +
Sbjct: 228 ERYKCEVKPANFVAKLSNWTMLSTNETE-MANWLAENGPIAVALNADFLQNYNNGI--AD 284

Query: 327 DETCSPYDLGHAVLLVGYGKQ-----DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 381
              C P  L H VL+VGYG +        PYW+V+NSWG    ++G+F+I +G   CGI 
Sbjct: 285 PAWCDPTQLDHGVLIVGYGLETFWFGKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGIN 344

Query: 382 QIAGYATI 389
            +   A +
Sbjct: 345 TVPSAAFV 352


>gi|118156|sp|P14658.1|CYSP_TRYBB RecName: Full=Cysteine proteinase; Flags: Precursor
 gi|10393|emb|CAA34485.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 154/346 (44%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNV-TTGRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
              Q  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKVQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C    SGC+G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ ++++   DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGIL----TSCTSKQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|7211741|gb|AAF40414.1|AF216783_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 156/350 (44%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 46  NADHHFTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPT 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CG
Sbjct: 106 EF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCG 157

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 158 SCWSFSTTGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT +AG L  E+DYPY   + +   C +DK+K+     
Sbjct: 195 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV--CRFDKTKIAAKVA 252

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 305

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|312378084|gb|EFR24752.1| hypothetical protein AND_10451 [Anopheles darlingi]
          Length = 1785

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 177/355 (49%), Gaps = 54/355 (15%)

Query: 56   SLTFDNEN-ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-----KHER----YGT 105
            SL  D+E  +   F+ F +   RQYA+  E + R+  F+ + +K     +HER    YG 
Sbjct: 1465 SLKIDDEAYVRRQFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHERGTGKYGV 1524

Query: 106  SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
            ++F+D +  E    TG    ++    I   R  +  +  E      +P ++DWR      
Sbjct: 1525 TKFADMTTAEYRAHTGLIVPKQHSNHI---RNPIATVSTERTS---LPTSFDWRDHGAVT 1578

Query: 166  PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
               +Q  CGSCWAFS  G                        +EG + IKT KL  +S+ 
Sbjct: 1579 GVKNQGNCGSCWAFSAIGN-----------------------IEGLHQIKTKKLEAYSEQ 1615

Query: 226  QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK--SKVKLF 282
            +L++C    +GC+G + + + +   +  GLE E +YPY+ A  +K  C ++K  S V++ 
Sbjct: 1616 ELIDCDTVDNGCNGGYMDDAFKAIEKLGGLELEDEYPYQ-AKAQKT-CHFNKTLSHVRV- 1672

Query: 283  TGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
              K  +    +ET + + L + GP+++ LN++ +  Y G         CS   + H VL+
Sbjct: 1673 --KGAVDMPKNETFIAQYLIENGPIAIGLNANAMQFYRGGISHPWHLLCSHKQIDHGVLI 1730

Query: 342  VGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            VGYG ++       +PYW ++NSWGP   ++G+++I RG+N+CG+ ++A  A ++
Sbjct: 1731 VGYGVKEYPLFNKTLPYWTIKNSWGPKWGEQGYYRIYRGDNSCGVSEMASSAILE 1785


>gi|47522632|ref|NP_999094.1| pro-cathepsin H precursor [Sus scrofa]
 gi|5915886|sp|O46427.1|CATH_PIG RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|2735659|gb|AAB93957.1| preprocathepsin H [Sus scrofa]
 gi|172050733|gb|ACB70168.1| cathepsin H [Sus scrofa]
          Length = 335

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 160/339 (47%), Gaps = 63/339 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++V+  ++Y+  EE   R + F  +  K +         + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAVAIATGKMLSLAEQQLVDCAQNFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD   +  N  
Sbjct: 181 CQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDE 236

Query: 294 ETMKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           E M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL VGYG++
Sbjct: 237 EAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEE 291

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           + IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 292 NGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|345783063|ref|XP_533219.3| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Canis lupus
           familiaris]
          Length = 490

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 153/342 (44%), Gaps = 54/342 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 188 MASVFKEFVTTYNRTYETKEEAEWRMSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEE 247

Query: 115 EILCKTGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
           E           RT      +  +R K  ++   +    P P+ WDWR K       DQ 
Sbjct: 248 EF----------RTIYLNPLLRENRGKKMRLAKSISDHAPPPE-WDWRSKGAVTKVKDQG 296

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAFS+ G                        +EGQ+ +K G L+  S+ +L++C 
Sbjct: 297 MCGSCWAFSVTGN-----------------------VEGQWFLKEGTLLSLSEQELLDCD 333

Query: 232 KQCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
           K    C G    PS  Y+      GLE+E DY Y+   G    C++   K +++      
Sbjct: 334 KVDKACLGGL--PSNAYSAIMTLGGLETEDDYSYQ---GHLQACSFSAKKARVYINDSME 388

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
                + +   L K GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + 
Sbjct: 389 LSQNEQKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS 448

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            IP+W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 449 GIPFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASSAVVN 490


>gi|13507095|gb|AAK28439.1| cysteine protease 3 precursor [Clonorchis sinensis]
          Length = 320

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 165/349 (47%), Gaps = 53/349 (15%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHE 101
             + GS   ++EN  + ++ F +K  + Y+ND++ + RF  FK         Q+  +   
Sbjct: 14  FGVLGSNIPESENARQLYEEFKLKYKKSYSNDDD-EYRFRVFKDNLLRIKQFQNMERGTA 72

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG ++FSD + +E   +    +    +  +  DRE V  + M+V+ D      +DWR  
Sbjct: 73  KYGVTQFSDLTAQEFKVR----YLRSKFGGVPVDREPVPFIRMDVDDDN-----FDWRNH 123

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
              GP  DQ  CGSCWAFS  G                        +EGQ+  KT  L++
Sbjct: 124 GAVGPVLDQGDCGSCWAFSAVGN-----------------------IEGQWFRKTDNLLQ 160

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C     GC+G   + +  +     GL+ + DYPY+   G+   C    SKVK
Sbjct: 161 LSEQQLLDCDGVDEGCNGGTPQQAFRQILGMGGLQLDSDYPYEGREGQ---CRMVPSKVK 217

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
           ++     +     +   ++L + GPLS  LN+  +      P+      C    L HAVL
Sbjct: 218 VYINGSKILPEDEQIQAQMLKETGPLSSALNALFLQH----PL---PALCDAQSLNHAVL 270

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VGYGK+  +PYW V+NSW  +  + G+F+I RG+  CGI  +   + I
Sbjct: 271 TVGYGKEGRLPYWTVKNSWSTMFGENGYFRIYRGDGTCGINTLVSTSII 319


>gi|7381221|gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 366

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 156/350 (44%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 44  NADHHFTVFKRRFGKVYASDEEHDYRLSVFKANMRRAKQHQELDPAAVHGVTQFSDLTPT 103

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CG
Sbjct: 104 EF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCG 155

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 156 SCWSFSTTGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT +AG L  E+DYPY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV--CRFDKTKIAAKVA 250

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFVQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|387015020|gb|AFJ49629.1| Cathepsin H [Crotalus adamanteus]
          Length = 337

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 155/337 (45%), Gaps = 54/337 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE------RYGTSEFSDRSPEEIL 117
           + FKA+  +  R Y ++EE + R + F  +  K  KH       R G ++FSD +  E  
Sbjct: 34  QLFKAWASQHRRAYRSEEEFRHRLQIFLDNKQKIDKHNAGNSSFRMGLNQFSDMTFTEF- 92

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN-VTGPAGDQAACGSC 176
            +  + W E         +     M       GP P A DWRKK     P  +Q +CGSC
Sbjct: 93  -RKKYLWQE--------PQNCSATMGNFPRSAGPCPKAIDWRKKGKFVSPVKNQGSCGSC 143

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE   AIKTGKL+  ++ QL++CA+  + 
Sbjct: 144 WTFSTTG-----------------------CLESAIAIKTGKLLNLAEQQLIDCAQNFNN 180

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-- 291
            GC G     + EY  +  GL  E+ YPY+  NG    C +   K   F  KD ++ +  
Sbjct: 181 FGCSGGLPSQAFEYILYNKGLMDEEAYPYRAQNG---TCKFQPQKAVAFI-KDVVNISLY 236

Query: 292 GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
             + + + +  Y P+S+   +  D +H   G      D   +P  + HAVL VGYG++  
Sbjct: 237 DEQGLVQAVGTYNPVSIAFEVREDFVHYQEGV-YTSTDCDKTPDKVNHAVLAVGYGEEGG 295

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +P+W+V+NSWG     +G+F IERG N CG+   A +
Sbjct: 296 VPFWIVKNSWGTSWGLDGYFNIERGKNMCGLADCASF 332


>gi|354494740|ref|XP_003509493.1| PREDICTED: cathepsin W-like [Cricetulus griseus]
 gi|344243260|gb|EGV99363.1| Cathepsin W [Cricetulus griseus]
          Length = 376

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 167/365 (45%), Gaps = 74/365 (20%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEFSDRSPEEILCK 119
           ++E FK F +K  R YAN  E   R   F     Q    + E  GT+EF +    ++   
Sbjct: 36  LIEVFKLFQIKYNRSYANPAEYARRLNIFAHNLAQAQRLQEEDLGTAEFGETPFSDL--- 92

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDG------PVPDAWDWRK-KNVTGPAGDQAA 172
                +E  + ++   ++  +++   V+K G      PVP   DWRK  N+     +Q  
Sbjct: 93  -----TEEEFGQLYGQQKAPKRIPNMVKKAGSEKWGQPVPSTCDWRKATNIISSIKNQKT 147

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           C  CWA + A                         +E  + IKT   VE S  +L++C +
Sbjct: 148 CRCCWAIAAADN-----------------------IEALWRIKTQHFVEVSVQELLDCER 184

Query: 233 QCSGCDGCF-FEPSIEYTHQAGLESEKDYPYK---NANGEKFKCAYDKSKVKLFTGKDFL 288
             +GCDG F ++  +   + +GL SEKDYP+K   N +G    C  ++ K K+   +DF 
Sbjct: 185 CGNGCDGGFVWDAYMTVLNNSGLASEKDYPFKGYPNPHG----CLANRYK-KVAWIQDFT 239

Query: 289 HFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK- 346
                E  +   L  +GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK 
Sbjct: 240 MLGRDEQVIAGYLATHGPITVTINMKLLQGYQKGVIKATPTTCDPQQVDHSVLLVGFGKG 299

Query: 347 ---------------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 385
                                + ++PYW+++NSWG    ++G+F++ RGNN+CGI +   
Sbjct: 300 KEKEDIQSGTILSQTRKPRKPRRSVPYWILKNSWGAEWGEKGYFRLYRGNNSCGITKYPI 359

Query: 386 YATID 390
            A +D
Sbjct: 360 TACLD 364


>gi|326516056|dbj|BAJ88051.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 362

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 160/366 (43%), Gaps = 57/366 (15%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 99
           +TD+  + +++ A+ G+L      +   F  F V  G+ Y +  E++ RF  F +   + 
Sbjct: 36  VTDRAASTLES-AVLGALGRTRHAL--RFARFAVGYGKSYESAAEVRRRFRIFSESLEEV 92

Query: 100 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKD 149
                     R G + FSD S           W E    R+ A +     +     +   
Sbjct: 93  RSTNRKGLPYRLGINRFSDMS-----------WEEFQATRLGAAQTCSATLAGNHLMRDA 141

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +P+  DWR+  +  P  +QA CGSCW FS  G                        LE
Sbjct: 142 AALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGA-----------------------LE 178

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNAN 266
             Y   TGK +  S+ QLV+CA   +  GC+G     + EY  +  G+++E+ YPYK  N
Sbjct: 179 AAYTQATGKNISLSEQQLVDCAGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN 238

Query: 267 GEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPI 323
           G    C Y  + + V++    + +  N  + +K  +    P+SV     D    Y     
Sbjct: 239 G---VCHYKAENAAVQVLDSVN-ITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVY 294

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             +    +P D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N C I   
Sbjct: 295 TSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATC 354

Query: 384 AGYATI 389
           A Y  +
Sbjct: 355 ASYPVV 360


>gi|146215998|gb|ABQ10201.1| cysteine protease Cp3 [Actinidia deliciosa]
          Length = 365

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCK 119
           F+ F  + G+ YA  E+   RF  FK +    + H+R      +G ++FSD +P E    
Sbjct: 50  FRLFKRRFGKSYATQEDHDYRFSVFKTNLRRARHHQRLDPSAVHGVTQFSDLTPAE---- 105

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ +    +R+    +  +  ++  E    +P  +DWR         +Q +CGSCW+F
Sbjct: 106 --FRRNHLGLKRLRFPADANKAPILPTED---LPADFDWRDHGAVASVKNQGSCGSCWSF 160

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 161 STTG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 197

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     ++EYT +AG L  E+DYPY     ++  C +D++K+        + 
Sbjct: 198 GSCDSGCNGGLMNSALEYTLKAGGLMREEDYPYSGT--DRGTCKFDETKIAASVANFSVV 255

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
                 +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 256 SLDENQIAANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICSKRLDHGVLLVGYG 308

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                  +    PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 309 SAGYAPIRMKEKPYWIIKNSWGESWGENGFYKICQGRNVCGVDSM 353


>gi|21593213|gb|AAM65162.1| cysteine proteinase RD19A [Arabidopsis thaliana]
          Length = 368

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 156/353 (44%), Gaps = 69/353 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCK 119
           F  F  K G+ YA++EE   RF  FK +    ++H++      +G ++FSD +  E   K
Sbjct: 51  FSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKK 110

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R+  ++  D  K   +  E      +P+ +DWR      P  +Q +CGSCW+F
Sbjct: 111 ---HLGVRSGFKLPKDANKAPILPTE-----NLPEDFDWRDHGAVTPVKNQGSCGSCWSF 162

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 163 SATG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEA 199

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + E+T    GL  E+DYPY   +G+   C  DKSK+        + 
Sbjct: 200 DSCDSGCNGGLMNSAFEHTLKTGGLMKEEDYPYTGKDGKT--CKLDKSKIVASVSNFSVI 257

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               E +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 258 SIDEEQIAANLVKNGPLAVAINAGYMQTYIGG-------VSCPYICTRRLNHGVLLVGYG 310

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                  +    PYW+++NSWG    + GF+KI +G N CG++ +       V
Sbjct: 311 AAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|77379397|gb|ABA71355.1| cysteine protease [Brassica napus]
          Length = 359

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 157/345 (45%), Gaps = 67/345 (19%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFTHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEF-- 116

Query: 119 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW FS  G                        LE  Y    GK +  S+ QLV+CA   
Sbjct: 165 SCWTFSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAF 201

Query: 235 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 290
           +  GC+G     + EY     GL++E+ YPY    GE   C Y    V +       +  
Sbjct: 202 NNYGCNGGLPSQAFEYIKSNGGLDTEEAYPY---TGEDGTCKYSAENVGVQVLDSVNITL 258

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGY 344
              + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGY
Sbjct: 259 GAEDELKHAVGLLRPVSIAF--EVIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGY 313

Query: 345 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           G +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 314 GIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 358


>gi|410960470|ref|XP_003986812.1| PREDICTED: pro-cathepsin H [Felis catus]
          Length = 321

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 153/334 (45%), Gaps = 53/334 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 119
           FK+++V+  ++Y++ EE + R + F          +      + G ++FSD S  EI  K
Sbjct: 21  FKSWMVQHQKRYSS-EEYQRRLQTFVGNWRRISAHNAGNHTFKMGLNQFSDMSFAEI--K 77

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN-VTGPAGDQAACGSCWA 178
             + WSE   +   A R         +   GP P   DWR K     P  +Q  CGSCW 
Sbjct: 78  HKYLWSEP--QNCSATRGNY------LRGTGPYPPFVDWRTKGKYVSPVKNQGGCGSCWT 129

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AIKTGKL+  ++ QLV+CA+  +  G
Sbjct: 130 FSTTG-----------------------ALESAIAIKTGKLLSLAEQQLVDCAQNFNNHG 166

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPYK  +G+   C +  SK   F  KD   +  N  
Sbjct: 167 CQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDE 222

Query: 294 ETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E M + +  Y P+S     +D    Y            +P  + HAVL VGYG++D IPY
Sbjct: 223 EAMVEAVALYNPVSFAFEVTDDFMMYRKGVYSSTSCHKTPDKVNHAVLAVGYGEKDGIPY 282

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           W+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 283 WIVKNSWGPQWGMKGYFLIERGKNMCGLAACASY 316


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 157/345 (45%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TG+LV  S+ QLV+C  +C     
Sbjct: 164 STTG-----------------------ALEGAHFLATGELVSLSEQQLVDCDHECDPEEP 200

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT +AG L  E+DYPY     ++  C +DK+KV        + 
Sbjct: 201 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKNKVAAGVANFSVV 258

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 259 SLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVLLVGYG 311

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                  +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 312 SAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 153/346 (44%), Gaps = 71/346 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC-AKQC---- 234
           S  G                        LEG + + TG+LV  S+ QLV+C  +QC    
Sbjct: 156 SATGA-----------------------LEGAHFLSTGELVSLSEQQLVDCDHQQCDPEE 192

Query: 235 -----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                SGC+G     + EY  +  G+  E+DYPY   NG    C +DK+K+        +
Sbjct: 193 AGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGT--CKFDKAKIAASVANFSV 250

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 344
                + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGY
Sbjct: 251 VSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGY 303

Query: 345 GKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 GSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 349


>gi|23397070|gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
          Length = 358

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 158/340 (46%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY     GL++EK YPY   + E  K + +   V++    + +     + 
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDE 262

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDN 349
           +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGYG +D 
Sbjct: 263 LKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDG 317

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 318 VPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 158/343 (46%), Gaps = 51/343 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------GTSEFSD 110
           N  E +  F VK  + Y +  E + RF  F+++  K    +E+Y         G ++F+D
Sbjct: 18  NDKEEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFTD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + +E L       + R       +R     +L  +     +P A+DWR K       DQ
Sbjct: 78  LTEKEFLDLLVLSKNAR------PNRTHATHLLAPLR---DLPSAFDWRDKGAVTEVKDQ 128

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW FS  G                        +E  + +KTG LV  S+  LV+C
Sbjct: 129 GMCGSCWTFSTTGS-----------------------VEAAHFLKTGNLVSLSEQNLVDC 165

Query: 231 AKQ-CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFL 288
           AK  C GC G + + ++EY  + G+ SEKDYPY+   G    C +D SKV    +   ++
Sbjct: 166 AKDTCYGCGGGWMDKALEYIEKGGIMSEKDYPYE---GVDDNCRFDISKVAAKISNFTYI 222

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQ 347
             N  E +K  +   GP+SV +++        + I  + E  + +D L H VL+VGYG +
Sbjct: 223 KKNDEEDLKNAVAAKGPISVAIDASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTE 282

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +   YW+++NSWG     +G+ ++ R  NN CGI     Y  I
Sbjct: 283 NGKDYWIIKNSWGVNWGMDGYIRMSRNKNNQCGITTDGVYPNI 325


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 159/344 (46%), Gaps = 57/344 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDRSP 113
           + +K F +   + Y + EE   RFE F+++  +  KH +           G ++F+D   
Sbjct: 77  QAWKEFKILHDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLEY 136

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
            E +   G K +         +  K    L     +  VPD+ DWR K       +Q AC
Sbjct: 137 AEFVNFNGLKMTN-------LNNTKCSSHLSA--NNIVVPDSVDWRSKGYVTKVKNQGAC 187

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        LEGQY  K GKLV  S+SQLV+C+  
Sbjct: 188 GSCWAFSATGS-----------------------LEGQYFRKNGKLVPLSESQLVDCSGS 224

Query: 234 CS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
               GC+G F E + +Y     G+ESE DYPYK     +  CA+DK+KV           
Sbjct: 225 FGNEGCNGGFMENAFKYVKSVGGIESESDYPYK---ARQRTCAFDKTKVIATVSGCVDVE 281

Query: 291 NGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +GSE ++K+++ + GP+SV +++       Y G     ++  CS   L H VL VGYG  
Sbjct: 282 SGSESSLKEVVSEVGPVSVAIDAGHSSFQLYAGGVY--DEPLCSTSRLNHGVLCVGYGTS 339

Query: 348 -DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
                YW+V+NSWG     EG+ K+ R  NN CGI   A Y  +
Sbjct: 340 LQGKDYWIVKNSWGVRWGVEGYIKMSRNKNNQCGIASEASYPLV 383


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 148/350 (42%), Gaps = 71/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C   C
Sbjct: 157 SCWSFSTTG-----------------------ALEGAHFLATGELVSLSEQQLVDCDHVC 193

Query: 235 ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EY     G++ EKDYPY   +G    C +DKSK+     
Sbjct: 194 DPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVS 250

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYICGKHLDHGVL 303

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG+           PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGEGAYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 353


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 150/343 (43%), Gaps = 58/343 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 113
           E ++ F +   + Y N  E K RF  F  +  +  E              G ++F+D +P
Sbjct: 21  EKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGVNKFADLTP 80

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKKNVTGPAGDQ 170
           EE +            ER    R+   K L E  K   DG +P   DW K+        Q
Sbjct: 81  EEFM------------ERFRPLRKTKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQ 128

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            +CGSCWAFS  G                        +E    IKTGKL+  S+ QLV+C
Sbjct: 129 GSCGSCWAFSTTGS-----------------------VESHNFIKTGKLISLSEQQLVDC 165

Query: 231 AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLH 289
            K  SGC G + + ++EY    G+ SE DYPY+  N     C ++ SK  +       + 
Sbjct: 166 VKNNSGCAGGWMDIALEYIEADGIMSEDDYPYEERNT---TCRFNNSKAAVQIKSYKAIK 222

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQ 347
            N    ++K +   GP+SV +   +        I  ND  C  +  DL HAVL+ GYG Q
Sbjct: 223 KNDEIDLQKAVALEGPVSVAIEVTIAFQLYARGIL-NDPQCKNTEGDLTHAVLVTGYGSQ 281

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           D   YW+V+NSWG     +G+ ++ R  +N CGI   A Y  +
Sbjct: 282 DGKDYWIVKNSWGAEYGMDGYLRMSRNADNQCGIATRASYPVL 324


>gi|348513249|ref|XP_003444155.1| PREDICTED: cathepsin K-like [Oreochromis niloticus]
          Length = 330

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 149/336 (44%), Gaps = 55/336 (16%)

Query: 73  VKRGRQYANDEEIKERFEYFKQDGH-----------KKHE-RYGTSEFSDRSPEEILCKT 120
            K G+ Y N  EI  R   ++++ H            KH    G +  +D + EEI  K 
Sbjct: 31  TKHGKVYDNQTEIDFRRAVWEKNVHLVLRHNQEASAGKHSFTLGLNHLADMTAEEINEKL 90

Query: 121 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
                E T        E V         D P+P   DWRK+ + GP  +Q  CGSCWAFS
Sbjct: 91  NGLKLEETVNFTNGTFEDVS--------DSPLPVNVDWRKEGLVGPVRNQGLCGSCWAFS 142

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCD 238
             G                        LEGQ   +TG LV  S   LV+C+ Q    GC 
Sbjct: 143 SLGA-----------------------LEGQLKKRTGTLVSLSPQNLVDCSTQDGNLGCR 179

Query: 239 GCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM- 296
           G +   +  Y     G++SE  YPY++ NG   KC Y       +  K  +   G E M 
Sbjct: 180 GGYITKAYSYVIRNGGVDSESFYPYEHKNG---KCRYSVQGRAGYCSKFSILPEGDEKML 236

Query: 297 KKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K+L   GP+SV +N+ L   H Y+G     N  +C+P  + HAVLLVGYG      YWL
Sbjct: 237 QKVLASVGPISVAVNAMLESFHMYSGG--LYNVPSCNPKLINHAVLLVGYGTDAGQDYWL 294

Query: 355 VRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           V+NSWG    + G+ ++ R  NN CGI     Y T+
Sbjct: 295 VKNSWGTAWGEGGYIRLARNKNNLCGIASFPVYPTV 330


>gi|149392541|gb|ABR26073.1| oryzain gamma chain precursor [Oryza sativa Indica Group]
          Length = 367

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 99
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 42  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 98

Query: 100 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 149
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 99  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 147

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +P+  DWR+  +  P  DQ  CGSCW FS  G                        LE
Sbjct: 148 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGS-----------------------LE 184

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNAN 266
             Y   TGK V  S+ QLV+CA   +  GC G     + EY  +  GL++E+ YPY   N
Sbjct: 185 AAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN 244

Query: 267 GEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPI 323
           G    C Y  +   VK+    + +     + +K  +    P+SV     +    Y     
Sbjct: 245 G---ICHYKPENVGVKVLDSVN-ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVY 300

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             +    SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   
Sbjct: 301 TSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATC 360

Query: 384 AGYATI 389
           A Y  +
Sbjct: 361 ASYPIV 366


>gi|10391|emb|CAA38238.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRVRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C     GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|261328617|emb|CBH11595.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
 gi|261328620|emb|CBH11598.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 450

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C     GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|261328615|emb|CBH11593.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 451

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C     GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|15485586|emb|CAC67416.1| cysteine protease [Trypanosoma brucei rhodesiense]
          Length = 450

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C     GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDSSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|6851030|emb|CAB71032.1| cysteine protease [Lolium multiflorum]
          Length = 359

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 48/332 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILCK 119
           F  F V+ G+ Y +  E++ RF  F +  D  +   R G S       FSD + EE    
Sbjct: 58  FARFAVRHGKSYGSAAEVQRRFRIFSESLDEVRSTNRKGLSYKLGINRFSDMTWEE---- 113

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ ++    +  +       ++ +      +P+  DWR+  +  P  DQA+CGSCW F
Sbjct: 114 --FQATKLGAAQTCSATLAGNHLMRDANA---LPETKDWRETGIVSPVKDQASCGSCWTF 168

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  Y   TGK +  S+ QLV+CA   +  GC
Sbjct: 169 STTG-----------------------ALEAAYTQATGKNISLSEQQLVDCAGAYNNFGC 205

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSET 295
           +G     + EY  +  G+++E+ YPYK  NG    C Y      +       +  N  + 
Sbjct: 206 NGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCKYRPENAAVQVADSVNITLNAEDE 262

Query: 296 MKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV     D    Y       +    +P D+ HAVL VGYG ++ +PYWL
Sbjct: 263 LKNAVGLVRPVSVAFEVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWL 322

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           ++NSWG    ++G+FK+E G N C +   A Y
Sbjct: 323 IKNSWGADWGEDGYFKMEMGKNMCAVATCASY 354


>gi|91992514|gb|ABE72973.1| cathepsin L [Aedes aegypti]
          Length = 265

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 40/296 (13%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           +YG + F+D +  E   +TG             DR  V     E++++  +P+++DWR+ 
Sbjct: 1   KYGITHFADMTSAEYRQRTGLVIPRDE------DRNHVGNPKAEIDENMELPESFDWREL 54

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +Q  CGSCWAFS+ G                        +EG + IKT  L E
Sbjct: 55  GAVSPVKNQGNCGSCWAFSVVGN-----------------------IEGLHQIKTKVLEE 91

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK 280
           +S+ +L++C    S C G + + + +   +  GLE E +YPY  A  +K  C ++ ++V 
Sbjct: 92  YSEQELLDCDAVDSACQGGYMDDAYKAIEKIGGLELESEYPYL-AKKQK-TCHFNSTEVH 149

Query: 281 LFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
           +   K  +    +ET M + L   GP+S+ LN++ +  Y G         CS  +L H V
Sbjct: 150 VRV-KGAVDLPKNETAMAQYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGV 208

Query: 340 LLVGYGKQD------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           L+VGYG ++       +PYW+V+NSWGP   ++G+++I RG+N CG+ ++A  A +
Sbjct: 209 LIVGYGVKEYPMFNKTMPYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVL 264


>gi|15705865|gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
          Length = 360

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 160/369 (43%), Gaps = 84/369 (22%)

Query: 53  IEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER----- 102
           I   ++ D + +L     F +F+ + G+ YA++ E   RF  FK +    ++H+R     
Sbjct: 27  IRQVVSDDQQQLLSAEAHFSSFLSRYGKSYADEAEHAYRFSVFKSNLRRARRHQRLDPTA 86

Query: 103 -YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDA 155
            +G + F+D +P E           RTY  +     +          D P+      P  
Sbjct: 87  VHGVTRFADLTPSEF---------RRTYLGL-----RRRPRTAGSTHDAPILPTNELPAD 132

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
           +DWR      P  +Q +CGSCW+FS AG                        LEG   + 
Sbjct: 133 FDWRDHGAVTPVKNQGSCGSCWSFSAAG-----------------------ALEGANYLS 169

Query: 216 TGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNA 265
           TG LV  S+ QLV+C  +C          GC+G     + EY  ++G LE E DYPY   
Sbjct: 170 TGNLVSLSEQQLVDCDHECDSSEPDSCDQGCNGGLMTTAFEYILKSGGLEREADYPYTGT 229

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 325
             ++  C ++K+K+        +     + +   L K+GPL+V +N+  +  Y G     
Sbjct: 230 --DRGTCKFNKAKISAVASNFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYVGG---- 283

Query: 326 NDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG 374
                 PY     L H VLLVGYG            PYW+++NSWG    + G++KI RG
Sbjct: 284 ---VSCPYICGKHLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGENWGENGYYKICRG 340

Query: 375 NNACGIEQI 383
            N CG++ +
Sbjct: 341 RNVCGVDSM 349


>gi|343477619|emb|CCD11596.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 49/342 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYLNGAKYYAAALKRPRKVVTVST-GKAPPAIDWRKKGAVTPVKDQRKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDNM 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC G   + ++++   +++  + +E+ YPY + +G+   C  +KS KV        ++
Sbjct: 185 DDGCQGGLMDRALKWIVSSNKGNVFTEESYPYDSTDGDVPPC--NKSGKVVGAKISGLIN 242

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               E  + + L K GP+++ +++    DY G  +     +CS   L H VLLVGY    
Sbjct: 243 LPKDENAIAEWLAKNGPIAIAVDASSFLDYTGGVL----TSCSSDALNHDVLLVGYDDSS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             PYW+++NSWG    +EG+ ++E+G N C +++ A  A + 
Sbjct: 299 KPPYWIIKNSWGKKWGEEGYIRVEKGTNQCLMKEYARSAVVS 340


>gi|444510192|gb|ELV09527.1| Cathepsin F [Tupaia chinensis]
          Length = 597

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 147/335 (43%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 300 FKNFVTTYNRTYQTKEEAQWRLSVFASNMVRAQKIQALDHGTAQYGVTKFSDLTEEEF-- 357

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +      +KM +      P P  WDWRK        DQ  CGSCWA
Sbjct: 358 -------RTIYLNPLLREVPGKKMHLAKSIGDPAPPEWDWRKNGAVTKVKDQGMCGSCWA 410

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 411 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKMDKACM 447

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++           + 
Sbjct: 448 GGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQACNFSAEKAKVYINDSVELSQNEQK 502

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L K GP+SV +N+  +  Y           CSP+ + HAVL+VGYG +  +P+W +
Sbjct: 503 LAAWLAKKGPISVAINAFGMQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRSEVPFWAI 562

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    ++G++ + RG+ +CG+  +A  A ++
Sbjct: 563 KNSWGTDWGEKGYYYLHRGSGSCGVNTMASSAVVN 597


>gi|218202220|gb|EEC84647.1| hypothetical protein OsI_31538 [Oryza sativa Indica Group]
          Length = 363

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 156/366 (42%), Gaps = 57/366 (15%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK 99
           +TDQ  + +++  I  +L    + +   F  F V+ G++Y +  E++ RF  F +     
Sbjct: 38  VTDQAASALESTVI-AALGRTRDAL--RFARFAVRHGKRYGDAAEVQRRFRIFSESLELV 94

Query: 100 HE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML--MEVEKD 149
                     R G + F+D S           W E    R+ A +     +     +   
Sbjct: 95  RSTNRRGLPYRLGINRFADMS-----------WEEFQASRLGAAQNCSATLAGNHRMRDA 143

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +P+  DWR+  +  P  DQ  CGSCW FS  G                        LE
Sbjct: 144 AALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGS-----------------------LE 180

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNAN 266
             Y   TGK V  S+ QLV+CA   +  GC G     + EY  +  GL++E+ YPY   N
Sbjct: 181 AAYTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVN 240

Query: 267 GEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPI 323
           G    C Y  +   VK+    + +     + +K  +    P+SV     +    Y     
Sbjct: 241 G---ICHYKPENVGVKVLDSVN-ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVY 296

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             +    SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   
Sbjct: 297 TSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATC 356

Query: 384 AGYATI 389
           A Y  +
Sbjct: 357 ASYPIV 362


>gi|118394988|ref|XP_001029851.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284124|gb|EAR82188.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 330

 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 154/350 (44%), Gaps = 58/350 (16%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSD 110
           T  +++I   FK F     ++Y+++E    R   FK++             ++G ++F+D
Sbjct: 20  TMQDQDIAAAFKKFTQTYNKKYSSEEHYNARLSIFKENLRRIELFNKNDEAQHGITQFAD 79

Query: 111 RSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
            + EE      G+K   R  +  V+                  P A DW  K    P  +
Sbjct: 80  LTHEEFADMYLGYKPQLRNSQAKVSLSST----------PFTAPTAIDWTTKGAVTPVKN 129

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK-LVEFSKSQLV 228
           Q +CGSCWAFS  G                        +EGQY ++  + L  FS+ QLV
Sbjct: 130 QGSCGSCWAFSTTGS-----------------------IEGQYVLQLKQNLTSFSEQQLV 166

Query: 229 EC-AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--------V 279
           +C  K+  GC+G   + +  Y   A LE+E  YPY   +G    C Y++S         V
Sbjct: 167 DCDTKEDQGCNGGLMDNAFTYLESAKLETESAYPYTAVDGS---CKYNQSLGVVGVASFV 223

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
            +  GK     +   TM   L   GPLSV +N++ +  Y G     N   C+P  L H V
Sbjct: 224 DIEQGKTVA--DTENTMGVALDNIGPLSVAINANNLQFYAGGI--SNPLICNPNGLNHGV 279

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           L+VG G ++   +W V+NSWG    ++G+F+I RG   CGI +   Y  +
Sbjct: 280 LIVGLGSENGKDFWKVKNSWGASWGEKGYFRIVRGKGKCGINRAVSYPVL 329


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/261 (34%), Positives = 128/261 (49%), Gaps = 36/261 (13%)

Query: 135 DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLN 194
           +RE  E   +     G +PD+ DWR K +  P  +Q  CGSCWAFS  G           
Sbjct: 97  NRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTGS---------- 146

Query: 195 HIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AG 253
                        LEG +A KTGKLV  S+  LV+C K+  GC G     + +Y  +  G
Sbjct: 147 -------------LEGAHAKKTGKLVSLSEQNLVDCDKKDHGCQGGLMTTAFKYIEENKG 193

Query: 254 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS 312
           +++E+ YPYK  NG   +C + K  +     +   +     E +KK + + GP+SV +++
Sbjct: 194 IDTEESYPYKAKNG---RCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDA 250

Query: 313 DLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 368
                ++   + K    + + CS   L H VL+VGYGK+D   YWLV+NSWG     EG+
Sbjct: 251 S----HSSFQLYKSGIYDPKICSSRKLDHGVLVVGYGKEDGEEYWLVKNSWGKNWGMEGY 306

Query: 369 FKIERGNNACGIEQIAGYATI 389
           FKI    N CGI   A Y  +
Sbjct: 307 FKIASKKNLCGICTSACYPVV 327


>gi|30387350|ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332509|gb|AAA96732.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|30270084|gb|AAP29900.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 163/329 (49%), Gaps = 55/329 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHE----RYGTSEFSDRSPEEILCK 119
           F+ F+ K  + Y+++ E   RF+ F+ +     +K H     +Y  ++F+D S +E + K
Sbjct: 28  FEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISK 87

Query: 120 -TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
            TG     +T    E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQTQNFCEVVVLDRPP---------DKGPLE--FDWRRLNKVTSVKNQGMCGA 136

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAF+  G                        LE Q+AIK  + +  S+ QL++C    +
Sbjct: 137 CWAFATLGS-----------------------LESQFAIKHNQFINLSEQQLIDCDFVDA 173

Query: 236 GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-S 293
           GCDG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAFEAVMNMGGIQAESDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFE 230

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
           E +K +L   GP+ V +++  I +Y     R   + C+ + L HAVLLVGY  ++ +P+W
Sbjct: 231 EKLKDLLRSVGPIPVAIDASDIVNYK----RGIMKYCANHGLNHAVLLVGYAVENGVPFW 286

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
           +++N+WG    ++G+F++++  NACGI+ 
Sbjct: 287 ILKNTWGADWGEQGYFRVQQNINACGIQN 315


>gi|18141289|gb|AAL60582.1|AF454960_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 359

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 157/345 (45%), Gaps = 67/345 (19%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 59  SFARFAHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEF-- 116

Query: 119 KTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
                  +RT     +   A  +   K+  E      +P+  DWR+  +  P  DQ  CG
Sbjct: 117 -------QRTKLGAAQNCSATLKGTHKLTGEA-----LPETKDWREDGIVSPVKDQGGCG 164

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW FS  G                        LE  Y    GK +  S+ QLV+CA   
Sbjct: 165 SCWTFSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAF 201

Query: 235 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 290
           +  GC+G     + EY     GL++E+ YPY    GE   C Y    V +       +  
Sbjct: 202 NNYGCNGGLPSQAFEYIKSNGGLDTEEAYPY---TGEDGTCKYSAENVGVEVLDSVNITL 258

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGY 344
              + +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGY
Sbjct: 259 GAEDELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYSDSHCGQTPMDVNHAVLAVGY 313

Query: 345 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           G +D +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 314 GIEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 358


>gi|29789900|gb|AAF21457.2|U56958_1 cysteine proteinase [Paragonimus westermani]
          Length = 272

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 129/257 (50%), Gaps = 40/257 (15%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           RYG ++FSD +PEE   K         Y     + ++V+++     K    P+  DWR K
Sbjct: 15  RYGVTQFSDLTPEEFAAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAK 63

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
                  +Q +CGSCWAFS AG                        +EGQ+ IKTG+LV 
Sbjct: 64  GAVTAVENQGSCGSCWAFSTAGN-----------------------VEGQWFIKTGQLVS 100

Query: 222 FSKSQLVECAKQCSGCDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            SK QLV+C +   GC+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ 
Sbjct: 101 LSKQQLVDCDRAADGCNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL- 156

Query: 281 LFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
           L    D +    SE      L ++GPLS LLN+  +  Y    I  +   CSP DL HAV
Sbjct: 157 LAKIDDSIALXPSEDDNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAV 216

Query: 340 LLVGYGKQDNIPYWLVR 356
           L VGY K+ ++PYW+++
Sbjct: 217 LTVGYDKEGDMPYWIIK 233


>gi|72389859|ref|XP_845224.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359932|gb|AAX80357.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801759|gb|AAZ11665.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 46/346 (13%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTS 106
           GSL  + E++   F AF  K G+ Y + +E   RF  F+        Q     +  +G +
Sbjct: 29  GSLHVE-ESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVT 87

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE      F+   R      A  +K  +  + V   G  P A DWR+K    P
Sbjct: 88  PFSDMTREE------FRARYRNGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTP 140

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        +EGQ+ +    LV  S+  
Sbjct: 141 VKDQGQCGSCWAFSTIGN-----------------------IEGQWQVAGNPLVSLSEQM 177

Query: 227 LVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV C     GC G   + +  +   ++   + +E  YPY + NGE+ +C  +  ++    
Sbjct: 178 LVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAI 237

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
                     + +   L + GPL++ +++    DYNG  +     +C+   L H VLLVG
Sbjct: 238 TDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGIL----TSCTSEQLDHGVLLVG 293

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           Y    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A +
Sbjct: 294 YNDNSNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAVV 339


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 174/405 (42%), Gaps = 95/405 (23%)

Query: 17  LIQAVFLLCGVASCLCLPSLTDRI-TDQVVARVDTLAIEGSLTFDNE-----NILETFKA 70
            I A+ L   VA+     S TD   TD  + R            DNE     N    F +
Sbjct: 5   FIFAIVLFAAVAT-----SSTDNTNTDDFIIR---------QVVDNEEDHLLNAEHHFTS 50

Query: 71  FIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTGF 122
           F  K  + Y+  EE   RF  FK +    K H++      +G ++FSD +  E       
Sbjct: 51  FKSKFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASE------- 103

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRKKNVTGPAGDQAACGSC 176
                 + R     +K  ++    +K  P+      P+ +DWR+K    P  DQ +CGSC
Sbjct: 104 ------FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWREKGAVTPVKDQGSCGSC 156

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC-- 234
           WAFS  G                        LEG + + TGKLV  S+ QLV+C   C  
Sbjct: 157 WAFSTTG-----------------------ALEGAHYLATGKLVSLSEQQLVDCDHVCDP 193

Query: 235 -------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 286
                  SGC+G     + EY  Q+G +  EKDY Y   +G    C +DKSKV       
Sbjct: 194 EQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDKSKVVASVSNF 250

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLVGYG 345
            +     E +   L K GPL+V +N+  +  Y +G         C+   L H VLLVG+G
Sbjct: 251 SVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSC---PYVCAKSRLDHGVLLVGFG 307

Query: 346 KQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           K           PYW+V+NSWG    ++G++KI RG N CG++ +
Sbjct: 308 KGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSM 352


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 161/355 (45%), Gaps = 68/355 (19%)

Query: 60  DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 106
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H++      +G +
Sbjct: 30  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANLIKAKLHQKLDPTAEHGIT 89

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           +FSD +  E   +     ++R   R+ A  +K       +     +P+ +DWR+K    P
Sbjct: 90  KFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTTNLPEDFDWREKGAVTP 141

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ +CGSCWAFS                         G LEG + + TGKLV  S+ Q
Sbjct: 142 VKDQGSCGSCWAFSTT-----------------------GALEGAHYLATGKLVSLSEQQ 178

Query: 227 LVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDK 276
           LV+C   C         SGC+G     + EY  Q+ G+  EKDY Y   +G    C +DK
Sbjct: 179 LVDCDHVCDPEEAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRDGS---CKFDK 235

Query: 277 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDL 335
           SKV        +     E +   L K GPL+V +N+  +  Y +G         C+   L
Sbjct: 236 SKVVASVSNFSVVSLDEEQIAANLVKNGPLAVAINAAWMQAYMSGVSC---PYVCAKARL 292

Query: 336 GHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            H VLLVG+GK           PYW+++NSWG    ++G++KI RG N CG++ +
Sbjct: 293 DHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSM 347


>gi|302771610|ref|XP_002969223.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
 gi|300162699|gb|EFJ29311.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
          Length = 367

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 175/377 (46%), Gaps = 76/377 (20%)

Query: 36  LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           +TD   D+   R+D  A +  L  +       FK+FI + G+ YA  E    R + F+ +
Sbjct: 33  VTDTARDESNGRLD--AAKALLDVETH-----FKSFIARFGKAYATAEAYAHRLKVFEAN 85

Query: 96  -----GHKKHER---YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE 147
                 H+  +    +G ++FSD + EE   K  F    R   R+   RE  +  ++   
Sbjct: 86  LVRAVSHQALDPSAVHGITQFSDLTEEEF--KQQF-LGLRVPSRL---REANKAPVLPTN 139

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
               +P+ +DWR+        +Q ACGSCWAFS  G                        
Sbjct: 140 D---LPEDFDWREHGAVTEVKNQGACGSCWAFSTTGA----------------------- 173

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESE 257
           +EG + ++TGKL+  S+ QLV+C   C         +GC+G     + +Y  ++G LE+E
Sbjct: 174 IEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGGLETE 233

Query: 258 KDYPYK-NANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH 316
            DYPY  N+NG   KC ++ +K+              + +   L K+GPL++ +N+  + 
Sbjct: 234 TDYPYTGNSNG---KCQFNANKIVASVANFSTVSLDEDQIAANLVKHGPLAIGINAVFMQ 290

Query: 317 DYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDE 366
            Y G    PI      CS + + H VLLVGYG +          PYW+++NSWG    ++
Sbjct: 291 TYIGGVSCPI-----ICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQ 345

Query: 367 GFFKIERGNNACGIEQI 383
           G++KI RG+  CG+  +
Sbjct: 346 GYYKICRGHGMCGMNTM 362


>gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum]
          Length = 373

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 156/336 (46%), Gaps = 70/336 (20%)

Query: 77  RQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERT 128
           + Y + +E   RF+ F+ +  +  +H+       +G ++FSD +P E      F+ +   
Sbjct: 67  KSYGSQKEHDYRFKIFQVNLRRAARHQNLDPSATHGVTQFSDLTPGE------FRKAYLG 120

Query: 129 YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNY 188
             R+   ++  E  ++  +    +P  +DWR+K    P  +Q +CGSCW+FS  G     
Sbjct: 121 LRRLRLPKDATEAPILPTDN---LPQDFDWREKGAVTPVKNQGSCGSCWSFSTTGA---- 173

Query: 189 LLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDG 239
                              LEG   + TGKLV  S+ QLV+C  +C         SGC+G
Sbjct: 174 -------------------LEGANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNG 214

Query: 240 CFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 298
                + EYT +AG L  E+DYPY     ++  C +D +KV        +     + +  
Sbjct: 215 GLMNSAFEYTLKAGGLMREEDYPYTGT--DRGTCKFDNTKVAAKVANFSVVSLDEDQIAA 272

Query: 299 ILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQ 347
            L+K GPL+V +N+  +  Y G           PY     L H VLLVGYG       + 
Sbjct: 273 NLFKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPVRM 325

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            + PYW+++NSWG    + GF++I RG N CG++ +
Sbjct: 326 KDKPYWIIKNSWGENWGENGFYRICRGRNICGVDSM 361


>gi|86355549|ref|YP_473217.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
 gi|86198154|dbj|BAE72318.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 53/352 (15%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 93
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 94  QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 149
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
           GP+   +DWR+ N      +Q  CG+CWAF+                           LE
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLAS-----------------------LE 147

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
            Q+AIK  +L+  S+ QL++C    +GC+G     + E   Q  G+++E DYPY+ ++G 
Sbjct: 148 SQFAIKHNQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGN 207

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
                           +    F   E +K +L   GP+ V +++  I +Y    +R    
Sbjct: 208 CRVDVAKFVVKVKKCYRYIAVF--EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR---- 261

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            CS Y L HAVLLVGYG ++N+PYW+++N+WG    ++G+F++++  NACGI
Sbjct: 262 YCSNYGLNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313


>gi|312281839|dbj|BAJ33785.1| unnamed protein product [Thellungiella halophila]
          Length = 373

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 153/353 (43%), Gaps = 69/353 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPEEILCK 119
           F  F  K G+ YA+ EE   R   FK +    ++H+      R+G ++FSD +  E   K
Sbjct: 56  FSLFKRKFGKVYASSEEHDYRLSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKK 115

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R   ++  D  K   +  E      +P+ +DWR +    P  +Q +CGSCW+F
Sbjct: 116 ---HLGVRGGFKLPKDANKAPILPTE-----NLPEDFDWRDRGAVTPVKNQGSCGSCWSF 167

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TGKLV  S+ QLV+C  +C     
Sbjct: 168 SATG-----------------------ALEGANFLATGKLVSLSEQQLVDCDHECDPEEA 204

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT    GL  E+DYPY   +G    C  DKSK+        + 
Sbjct: 205 GSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGKDGPT--CKLDKSKIVASVSNFSVI 262

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 263 SIDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICARRLNHGVLLVGYG 315

Query: 346 KQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                       PYW+++NSWG    + GF+KI +G N CG++ +    +  V
Sbjct: 316 SAGYAPARFKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSLVSTVSATV 368


>gi|18424347|ref|NP_568921.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|71152227|sp|Q8H166.2|ALEU_ARATH RecName: Full=Thiol protease aleurain; Short=AtALEU; AltName:
           Full=Senescence-associated gene product 2; Flags:
           Precursor
 gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein [Arabidopsis thaliana]
 gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|9757740|dbj|BAB08221.1| AALP protein [Arabidopsis thaliana]
 gi|21617934|gb|AAM66984.1| cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397068|gb|AAN31819.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397074|gb|AAN31822.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|24417304|gb|AAN60262.1| unknown [Arabidopsis thaliana]
 gi|222423506|dbj|BAH19723.1| AT5G60360 [Arabidopsis thaliana]
 gi|222424411|dbj|BAH20161.1| AT5G60360 [Arabidopsis thaliana]
 gi|332009930|gb|AED97313.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 358

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 158/340 (46%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTG-----------------------ALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY     GL++EK YPY   + E  K + +   V++    + +     + 
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDE 262

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDN 349
           +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGYG +D 
Sbjct: 263 LKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDG 317

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 318 VPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|358339355|dbj|GAA47435.1| cathepsin F [Clonorchis sinensis]
          Length = 1157

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 144/304 (47%), Gaps = 41/304 (13%)

Query: 76  GRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 135
           G  +  ++ IK+    F Q   +    YG ++FSD + EE          + T+  +  D
Sbjct: 646 GMLWGEEDNIKQ--AEFYQTLERGTALYGVTQFSDLTGEEF---------QETFLGLRLD 694

Query: 136 REKVEKMLMEVEKDGPV--PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYL 193
            E+  K    V+K   V  P+ +DWR     GP  DQ  CGSCWAFS+ G          
Sbjct: 695 -EQYSKSQSYVKKKHSVSIPENYDWRPYGAVGPVLDQGHCGSCWAFSVIGN--------- 744

Query: 194 NHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-A 252
                         +EGQ+  KTG+LV  SK QLV+C +   GC G +   + +   +  
Sbjct: 745 --------------IEGQWFRKTGQLVSLSKQQLVDCDRSSRGCGGGYPPATYDSIRRIG 790

Query: 253 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS 312
           GLE E DY Y   +G    C  +  K   +            T+ + L  +GP+S+ LN+
Sbjct: 791 GLEIELDYRYTGRDG---VCHQNPRKFVAYVNSSVALTKDENTIAEWLSYHGPISMALNA 847

Query: 313 DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 372
            L+  Y    +      C   D+ HAVL VG+G + N+P+W+V+NSWG +  +EG+F+I 
Sbjct: 848 RLLQFYVSGIMHPPAAYCPVKDISHAVLSVGFGTKGNVPFWIVKNSWGTLWGEEGYFRIY 907

Query: 373 RGNN 376
           RG++
Sbjct: 908 RGDD 911



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 34/257 (13%)

Query: 136 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNH 195
           R+  +    E E  G   D++DWR     GP  DQ  CG+ WAFS  G            
Sbjct: 447 RKLNQSKTTEPETVGEPQDSFDWRDYGAVGPVLDQDRCGASWAFSAIGN----------- 495

Query: 196 IDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGL 254
                       +EGQY ++  +L+  S+ QLV+C +   GC G     + E   Q  GL
Sbjct: 496 ------------IEGQYFMRVHRLLSLSEQQLVDCDRIDQGCAGGTPYGAFEGIQQLGGL 543

Query: 255 ESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 314
           E E DYPY    G +  C  +  +  +            + + + L+ +GPLSV +N  L
Sbjct: 544 ELEADYPYL---GHQDNCQSNPLRFVVSINGSVQLPKDEDQIAQYLFDHGPLSVGINGAL 600

Query: 315 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK---- 370
           +  Y+   ++   + C+P ++ HA L VG+G + ++PYW ++NSWG +  +E   K    
Sbjct: 601 LQYYSSGIMQPLWDNCNPAEMNHAGLAVGFGFEQDVPYWTIKNSWGMLWGEEDNIKQAEF 660

Query: 371 ---IERGNNACGIEQIA 384
              +ERG    G+ Q +
Sbjct: 661 YQTLERGTALYGVTQFS 677



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 92/218 (42%), Gaps = 48/218 (22%)

Query: 144 MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLI 203
           + V++ G +P  +DWR+    GP  +Q  CGSCWA S                       
Sbjct: 210 IHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAIS----------------------- 246

Query: 204 FPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPY 262
                                +++V+C     GC G F   + E   +  GLE    YPY
Sbjct: 247 ---------------------AEVVDCDHADHGCSGGFPIHAYECVQRLGGLELAVRYPY 285

Query: 263 KNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTP 322
               G +  C  D      +          SE + K L  +GPLSV+L++ L+  Y    
Sbjct: 286 V---GYQQYCQADPRYFVAYINGSVALPKDSEQIAKFLATFGPLSVVLDARLLQYYRSGI 342

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 360
           +  +   C+P +L HAVL VG+G +  IPYW+++NSWG
Sbjct: 343 LNPSVAYCNPEELNHAVLSVGFGTEQGIPYWIIKNSWG 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 83/185 (44%), Gaps = 31/185 (16%)

Query: 135  DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLN 194
            DRE      M V+  G +P+ +DWR+    GP  DQ  CGSCWAFS  G           
Sbjct: 982  DREPSRAGSMVVDDLGEIPERFDWRELGAVGPIQDQGDCGSCWAFSTIGN---------- 1031

Query: 195  HIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQ 251
                         +EGQ+  KTG+L+  S+ QL++C     GC G +  P   Y      
Sbjct: 1032 -------------IEGQWFKKTGQLLTLSEQQLIDCDSVDDGCGGGY--PPDTYGDIVKM 1076

Query: 252  AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN 311
             GLE   DYPY  A+G    C  ++SK + +  K  +     +     L K GPLS  +N
Sbjct: 1077 GGLELNADYPYIAADG---VCKMERSKFRAYVNKSLVLPTKEDQQAVWLSKNGPLSAGIN 1133

Query: 312  SDLIH 316
            +D + 
Sbjct: 1134 ADYLQ 1138



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 6/143 (4%)

Query: 220 VEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KS 277
           VE +  QLV+C     GC+G F  +  +      GL+   DYPY  +   +  C ++ K 
Sbjct: 18  VESNVQQLVDCDHVDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIAS---RQACQFNPKQ 74

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
            V   TG   L  N    + + L++ GPLSV LNS  +  YN   +    E C P  L H
Sbjct: 75  AVAFVTGFAALPRN-ELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEALNH 133

Query: 338 AVLLVGYGKQDNIPYWLVRNSWG 360
           A L VG+G  ++ P+W+++N++G
Sbjct: 134 AALAVGFGTDESTPFWIIKNTFG 156


>gi|115446097|ref|NP_001046828.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|47497527|dbj|BAD19579.1| putative cysteine proteinase 1 precursor [Oryza sativa Japonica
           Group]
 gi|113536359|dbj|BAF08742.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|215701326|dbj|BAG92750.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704370|dbj|BAG93804.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708762|dbj|BAG94031.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218200777|gb|EEC83204.1| hypothetical protein OsI_28465 [Oryza sativa Indica Group]
 gi|222622835|gb|EEE56967.1| hypothetical protein OsJ_06681 [Oryza sativa Japonica Group]
          Length = 373

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 162/360 (45%), Gaps = 73/360 (20%)

Query: 60  DNE---NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEF 108
           DNE   N    F +F+ + G+ Y + +E   R   FK +    ++H+       +G ++F
Sbjct: 39  DNELELNAERHFASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKF 98

Query: 109 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           SD +P E      G + S R + R +        +L     DG +PD +DWR     GP 
Sbjct: 99  SDLTPAEFRRAYLGLRTSRRAFLRGLGGSAHEAPVL---PTDG-LPDDFDWRDHGAVGPV 154

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q +CGSCW+FS +                       G LEG   + TGK+   S+ Q+
Sbjct: 155 KNQGSCGSCWSFSAS-----------------------GALEGANYLATGKMDVLSEQQM 191

Query: 228 VECAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKS 277
           V+C  +C         +GC+G     +  Y     GLESEKDYPY   +G    C +DKS
Sbjct: 192 VDCDHECDSSEPDSCDAGCNGGLMTNAFSYLLKSGGLESEKDYPYTGRDG---TCKFDKS 248

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY---- 333
           K+        +     + +   L K+GPL++ +N+  +  Y G           PY    
Sbjct: 249 KIVTSVQNFSVVSVDEDQIAANLVKHGPLAIGINAAYMQTYIGG-------VSCPYICGR 301

Query: 334 DLGHAVLLVGYGKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNA---CGIEQI 383
            L H VLLVGYG     P       YW+++NSWG    + G++KI RG+N    CG++ +
Sbjct: 302 HLDHGVLLVGYGASGFAPIRLKDKAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSM 361


>gi|449469923|ref|XP_004152668.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449520697|ref|XP_004167370.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 371

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 179/402 (44%), Gaps = 75/402 (18%)

Query: 13  KAIMLIQAVFLLCGVASCLCLPSLTDRITDQ---VVARVDTLAIEGSLTFDNENILETFK 69
            AI L  A+ L   VA  +    +   ++D+   ++ +V + A +  LT +     + F+
Sbjct: 5   NAIPLFFAILLSATVAYGVSSDQINSAVSDEEDILIRQVVSGADDRPLTAE-----QHFQ 59

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCKTG 121
            F +K G+ Y  DEE   RF  FK +    K+H++      +G + FSD +  E   +  
Sbjct: 60  DFKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDPDAVHGVTRFSDLTESEF--REN 117

Query: 122 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 181
           F    R   R+ AD  +   +  +      +   +DWR +    P  DQ +CGSCW+FS 
Sbjct: 118 FVGLNRL--RLPADAHQAPILPTD-----NLASDFDWRDQGAVTPVKDQGSCGSCWSFSA 170

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC------- 234
            G                        LEG   + TGKL+  S+ QLV+C  +C       
Sbjct: 171 VG-----------------------ALEGANFLSTGKLISLSEQQLVDCDHECDPEEAGA 207

Query: 235 --SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             +GC+G     + EY  +AG LE E+DYPY     ++  C +   K+        +  N
Sbjct: 208 CDAGCNGGLMTSAFEYIVKAGGLEREEDYPYTGT--DRGSCKFQNGKIAASAANFSVISN 265

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYG--- 345
            ++ +   L K GPL++ +N+  +  Y      P       CS  +L H VLLVGYG   
Sbjct: 266 DADQIAANLVKNGPLAIGINAVFMQTYMKGISCPY-----ICSKRNLDHGVLLVGYGAAG 320

Query: 346 ----KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
               +    PYW+++NSWG    + G++ I +G N CG E +
Sbjct: 321 FAPIRLKEKPYWIIKNSWGENWGENGYYFICKGKNICGSESM 362


>gi|302754322|ref|XP_002960585.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
 gi|300171524|gb|EFJ38124.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
          Length = 330

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 163/345 (47%), Gaps = 69/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGTSEFSDRSPEEILCK 119
           FK+FI + G+ YA  E    R + F+ +      H+  +    +G ++FSD + EE   K
Sbjct: 21  FKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDPSAVHGITQFSDLTEEEF--K 78

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F    R   R+   RE  +  ++       +P+ +DWR+        +Q ACGSCWAF
Sbjct: 79  QQF-LGLRVPSRL---REANKAPVLPTND---LPEDFDWREHGAVTEVKNQGACGSCWAF 131

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        +EG + ++TGKL+  S+ QLV+C   C     
Sbjct: 132 STTGA-----------------------IEGAHFLETGKLISLSEQQLVDCDHSCDPTDK 168

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYK-NANGEKFKCAYDKSKVKLFTGKDFL 288
               +GC+G     + +Y  ++G LE+E DYPY  N+NG   KC ++ +K+         
Sbjct: 169 VSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG---KCQFNANKIVASVANFST 225

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG 345
                + +   L K+GPL++ +N+  +  Y G    PI      CS + + H VLLVGYG
Sbjct: 226 VSLDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPI-----ICSKHHIDHGVLLVGYG 280

Query: 346 KQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +          PYW+++NSWG    ++G++KI RG+  CG+  +
Sbjct: 281 AKGYAPIRFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTM 325


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 156/345 (45%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E    
Sbjct: 53  FSLFKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE---- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+       ++   ++     ++       +P+ +DWR+K   GP  +Q +CGSCW+F
Sbjct: 109 --FRKQVLGLRKLRLPKDANTAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSF 163

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TG+LV  S+ QLV+C  +C     
Sbjct: 164 STTG-----------------------ALEGAHFLATGELVSLSEQQLVDCDHECDPEEP 200

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT +AG L  E+DYPY     ++  C +DK+KV          
Sbjct: 201 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKNKVAAGVANFSAV 258

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 259 SLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSRRLDHGVLLVGYG 311

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                  +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 312 SAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 356


>gi|357158628|ref|XP_003578189.1| PREDICTED: thiol protease aleurain-like [Brachypodium distachyon]
          Length = 363

 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 149/338 (44%), Gaps = 54/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E++ RF  F +   +           R G + +SD S       
Sbjct: 62  FARFAVRYGKSYESAAEVQRRFRIFSESLEEVRSTNQKGLSYRLGINRYSDMS------- 114

Query: 120 TGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
               W E    R+ A +      +    ++    +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 115 ----WEEFQASRLGAAQTCSATLRGNHRMQDANALPETKDWREDGIVSPVKDQSHCGSCW 170

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y   TGK +  S+ QLV+CA   +  
Sbjct: 171 TFSTTG-----------------------ALEAAYTQATGKNISLSEQQLVDCAGAYNNF 207

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNG 292
           GC+G     + EY  +  GL++E+ YPYK  NG    C Y  + + V++    + +  N 
Sbjct: 208 GCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNG---VCHYKPENAAVQVLDSVN-ITLNA 263

Query: 293 SETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            + ++  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++  P
Sbjct: 264 EDELQNAVGLVRPVSVAFEVINGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGTP 323

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWL++NSWG    D+G+FK+ERG N C +   A Y  +
Sbjct: 324 YWLIKNSWGESWGDKGYFKMERGKNMCAVATCASYPIV 361


>gi|340053968|emb|CCC48262.1| cysteine peptidase, Clan CA, family C1,Cathepsin L-like, fragment,
           partial [Trypanosoma vivax Y486]
          Length = 323

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 147/324 (45%), Gaps = 49/324 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERYGTSEFSDRSPEEILCK 119
           F AF  K GR Y    E   R   F+ +  +         H  +G + FSD +PEE   +
Sbjct: 34  FAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF--R 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T +   ER +E   A R +V + L++V   G  P A DWR+K    P  DQ  CGSCW+F
Sbjct: 92  TRYHNGERHFE---AARGRV-RTLVQVPP-GKAPAAVDWRRKGAVTPVKDQGRCGSCWSF 146

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+A     L   S+  LV C  + +GC G
Sbjct: 147 SAIGN-----------------------IEGQWAAAGNPLTSLSEQMLVSCDFKDNGCGG 183

Query: 240 CFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKC-AYDKSKVKLFTGK-DFLHFNGSE 294
            F + + E+    +   + +EK YPY + +G K  C  Y        TG  D  H    +
Sbjct: 184 GFMDNAFEWIVKENSGKVYTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPH--DED 241

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            + K L   GP++V +++     Y+G  +     +C+   L H VLLVGY      PYW+
Sbjct: 242 AIAKYLADNGPVAVAVDATTFMSYSGGVV----TSCTSEALNHGVLLVGYNDSSKPPYWI 297

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSW     ++G+ +IE+G N C
Sbjct: 298 IKNSWSSSWGEKGYIRIEKGTNQC 321


>gi|426252044|ref|XP_004019728.1| PREDICTED: cathepsin W [Ovis aries]
          Length = 375

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 70/377 (18%)

Query: 52  AIEGSLTFDN-----ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE----- 101
            I+GSL   +     + + E F+ F ++  R Y N  E   R + F Q+  K        
Sbjct: 21  GIKGSLRGQDPGPQPQELKEVFRLFQMQYNRSYPNPAEHARRLDIFAQNLAKAQRLQEED 80

Query: 102 ----RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 157
                +G ++FSD + EE +   G         R+  +   V + +   E     P   D
Sbjct: 81  LGTAEFGVTQFSDLTEEEFVQLYG--------SRVAGEALGVSRKVGSEEWGESQPPTCD 132

Query: 158 WRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           WR K N   P  +Q  C  CWA + AG                        +E  +AIK 
Sbjct: 133 WRNKPNTISPVRNQRHCNCCWAMAAAGN-----------------------IEALWAIKF 169

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD 275
            + VE    +L++C +  +GC G F ++  +      GL SE DYP+ + +G+  +C  +
Sbjct: 170 NRSVEERGGELLDCDRCGNGCKGGFVWDAFLTVLKNRGLASETDYPF-DGSGKTHRCLAE 228

Query: 276 KSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 334
           K K K+   +DF+     E ++ + L   GP++V +N  L+  Y    I+    TC P  
Sbjct: 229 KHK-KVAWIQDFIMLQACEQSIARHLATQGPITVTINVKLLQQYQKGVIKATPTTCDPRH 287

Query: 335 LGHAVLLVGYGKQDNI--------------------PYWLVRNSWGPIGPDEGFFKIERG 374
           + H+VLLVG+GK  ++                     YW ++NSWGP   +EG+F++ RG
Sbjct: 288 VDHSVLLVGFGKTKSVEGRQGKAASFRSYTRPRRSMAYWTLKNSWGPHWGEEGYFRLHRG 347

Query: 375 NNACGIEQIAGYATIDV 391
           +N CGI +    A +D+
Sbjct: 348 SNTCGITKYPVTAIVDI 364


>gi|94480716|emb|CAI91577.1| cathepsin L [Aphrocallistes vastus]
          Length = 329

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 173/394 (43%), Gaps = 87/394 (22%)

Query: 18  IQAVFLLCGV--ASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKR 75
           ++ VFLL G+   +C+CL   T+ + D         A EG               + +K 
Sbjct: 1   MKLVFLLLGLFAGACVCLQCETEEVQD--------FAWEG---------------WKLKY 37

Query: 76  GRQYANDEEIKERF--------EYFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSE 126
            R Y  DEE++++         + F  +GH    +   ++F+D +  E      G+    
Sbjct: 38  NRSYGLDEELRKKIWANNMLYVKEFNAEGHSY--KLAANQFADLTNLEYRQIYLGYDNEA 95

Query: 127 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
           R        R++  K+     KD  +P   DWR K V  P  +Q  CGSCW+FS  G   
Sbjct: 96  RL------SRKREGKVFQRKMKDEDLPTTVDWRSKGVVTPVKNQGQCGSCWSFSATGS-- 147

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEP 244
                                LEGQYAIK+GKLV FS+ +LV+C+      GC G   + 
Sbjct: 148 ---------------------LEGQYAIKSGKLVSFSEQELVDCSTSLGNHGCQGGLMDY 186

Query: 245 SIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF----LHFNGSETMKKIL 300
           + +Y      E E DY Y   NG   KC Y+    +L   KD     +     + +K+ +
Sbjct: 187 AFKYWETNLAEKESDYTYTAKNG---KCKYN---AQLGVTKDSSFTDIPSENCDALKEAV 240

Query: 301 YKYGPLSVLLNSD-----LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
              GP++V +++      + H    TP       CS   L H VL+VGYG  + + YWL+
Sbjct: 241 ANKGPIAVAMDASHTSFQMYHSGIYTPF-----LCSKTKLDHGVLVVGYGTDNGVDYWLI 295

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +NSWG     +G+FKIE  ++ CGI   A Y  +
Sbjct: 296 KNSWGMAWGMDGYFKIEMKSDKCGICTQASYPNL 329


>gi|410045434|ref|XP_003313198.2| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pan troglodytes]
          Length = 548

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 49/339 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPE 114
           +   FK F++   R Y + EE + R   F  +  +  +         +YG ++FSD + E
Sbjct: 247 MASIFKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEE 306

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y   +  +E   KM          P  WDWR K       DQ  CG
Sbjct: 307 EF---------RTIYLNPLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGAVTKVKDQGMCG 357

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        +EGQ+ +  G L+  S+ +L++C K  
Sbjct: 358 SCWAFSVTGN-----------------------VEGQWFLNQGTLLSLSEQELLDCDKMD 394

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             C G    PS  Y+   +  GLE+E DY Y+   G    C +   K K++     +   
Sbjct: 395 KACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GHMQSCNFSAEKAKVYINDSVVLSQ 449

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GP+SV +N+  +  Y     R     CSP+ + HAVLLVGYG + ++P
Sbjct: 450 NEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNRSDVP 509

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    ++G++ +  G+ ACG+  +A  + ++
Sbjct: 510 FWAIKNSWGTDWGEKGYYYLHCGSEACGVNTMASLSVVE 548


>gi|115479391|ref|NP_001063289.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|115510968|sp|P25778.2|ORYC_ORYSJ RecName: Full=Oryzain gamma chain; Flags: Precursor
 gi|51535997|dbj|BAD38077.1| putative oryzain gamma chain precursor [Oryza sativa Japonica
           Group]
 gi|113631522|dbj|BAF25203.1| Os09g0442300 [Oryza sativa Japonica Group]
 gi|215694919|dbj|BAG90110.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 362

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 143/338 (42%), Gaps = 54/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G++Y +  E++ RF  F +               R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 120 TGFKWSERTYERIVADREKVEKML--MEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y   TGK V  S+ QLV+CA   +  
Sbjct: 171 TFSTTGS-----------------------LEAAYTQATGKPVSLSEQQLVDCATAYNNF 207

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNG 292
           GC G     + EY  +  GL++E+ YPY   NG    C Y  +   VK+    + +    
Sbjct: 208 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENVGVKVLDSVN-ITLGA 263

Query: 293 SETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++ +P
Sbjct: 264 EDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVP 323

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 324 YWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIV 361


>gi|115495381|ref|NP_001068884.1| cathepsin F precursor [Bos taurus]
 gi|111304901|gb|AAI20004.1| Cathepsin F [Bos taurus]
 gi|296471599|tpg|DAA13714.1| TPA: cathepsin F [Bos taurus]
          Length = 460

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 59/340 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE   R   F  +  +  +         RYG ++FSD + EE   
Sbjct: 163 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTARYGVTKFSDLTEEEF-- 220

Query: 119 KTGFKWSERT--YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                   RT     ++ D         +   D P P  WDWR K       DQ  CGSC
Sbjct: 221 --------RTIYLNPLLKDAPGRNMRPAQPVTDVPPPQ-WDWRNKGAVTNVKDQGMCGSC 271

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS+ G                        +EGQ+ +K G L+  S+ +L++C K    
Sbjct: 272 WAFSVTGN-----------------------VEGQWFLKRGTLLSLSEQELLDCDKTDKA 308

Query: 237 CDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G    PS  Y+      GLE+E DY Y+   G    C++   K K++           
Sbjct: 309 CLGGL--PSNAYSAIRTLGGLETEDDYSYR---GRLQTCSFSAEKAKVYINDSVELSKNE 363

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           + +   L K GP+S+ +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  I
Sbjct: 364 QKLAAWLAKNGPVSIAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSAI 420

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 421 PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNIMASSAVIN 460


>gi|351726954|ref|NP_001236888.1| cysteine proteinase precursor [Glycine max]
 gi|479060|emb|CAA83673.1| cysteine proteinase [Glycine max]
 gi|300507422|gb|ADK24076.1| cysteine proteinase [Glycine max]
 gi|300507425|gb|ADK24077.1| cysteine proteinase [Glycine max]
 gi|1096153|prf||2111244A Cys protease
          Length = 380

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 182/413 (44%), Gaps = 91/413 (22%)

Query: 14  AIMLIQAVFL-LCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FK 69
           A+M +  V L LC     L L +     T Q +AR   L        DNE +L T   FK
Sbjct: 8   ALMCLARVSLFLCA----LTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFK 55

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTG 121
            F+   GR Y+ +EE   R   F Q+  +  E         +G ++FSD + +E      
Sbjct: 56  VFMENYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSDLTEDEF----- 110

Query: 122 FKWSERTYERI----VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
               E+ Y  +     +       +   +E DG +P+ +DWR+K        Q  CGSCW
Sbjct: 111 ----EKLYTGVNGGFPSSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCW 165

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC--- 234
           AFS  G                        +EG   + TGKLV  S+ QL++C  +C   
Sbjct: 166 AFSTTGS-----------------------IEGANFLATGKLVSLSEQQLLDCDNKCDIT 202

Query: 235 ------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                 +GC+G     +  Y  ++G LE E  YPY    GE+ +C +D  K+ +    +F
Sbjct: 203 EKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY---TGERGECKFDPEKIAVKI-TNF 258

Query: 288 LHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVG 343
            +    E  +   L K GPL++ +N+  +  Y G    P+      CS   L H VLLVG
Sbjct: 259 TNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKRLNHGVLLVG 313

Query: 344 YGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YG +        N PYW+++NSWG    ++G++K+ RG+  CGI  +   A +
Sbjct: 314 YGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSAAMV 366


>gi|14602252|ref|NP_148795.1| ORF11 cathepsin [Cydia pomonella granulovirus]
 gi|13124000|sp|O91466.1|CATV_GVCPM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|14591773|gb|AAK70678.1| ORF11 cathepsin [Cydia pomonella granulovirus]
          Length = 333

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 171/357 (47%), Gaps = 46/357 (12%)

Query: 36  LTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
           +T  +   ++A V T+    +LT+D  N  E FK F +K  + Y +DEE   + E FK +
Sbjct: 1   MTKLLNFVILASVLTVTAH-ALTYDLNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNN 59

Query: 96  GHKKHER--------YGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEV 146
               +E+        +  +E+SD +   +L +T GF+   +         E    ++++ 
Sbjct: 60  LKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTE-CSVVVIKD 118

Query: 147 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPG 206
           E    +P+  DWR K+   P  +Q  CGSCWAFS                          
Sbjct: 119 EPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIAN---------------------- 156

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNA 265
            +E  Y IK  K +  S+  LV C    +GC G     ++E   Q  G+ S ++ PY   
Sbjct: 157 -IESLYNIKYDKALNLSEQHLVNCDNINNGCAGGLMHWALESILQEGGVVSAENEPYYGF 215

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTP-I 323
           +G   K  ++ S     +G           ++++L   GP+SV ++ SDLI+   G   I
Sbjct: 216 DGVCKKSPFELS----ISGSRRYVLQNENKLRELLVVNGPISVAIDVSDLINYKAGIADI 271

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            +N+E      L HAVLLVGYG ++++PYW+++NSWG    +EG+F+++R  N+CG+
Sbjct: 272 CENNE-----GLNHAVLLVGYGVKNDVPYWILKNSWGAEWGEEGYFRVQRDKNSCGM 323


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 147/350 (42%), Gaps = 71/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   RF  FK +  +   H +      +G ++FSD +P 
Sbjct: 46  NAEHHFSTFKSKFGKTYATKEEHDHRFGVFKSNMRRARLHAQLDPSAVHGVTKFSDLTPA 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E           R +  +   R         +     +P  +DWR K       DQ +CG
Sbjct: 106 EF---------HRKFLGLKPLRLPAHAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGSCG 156

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C   C
Sbjct: 157 SCWSFSTTG-----------------------ALEGAHFLATGELVSLSEQQLVDCDHVC 193

Query: 235 ---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EY     G++ EKDYPY   +G    C +DKSK+     
Sbjct: 194 DPEEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG---TCKFDKSKIAASVS 250

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     E +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NYSVISLDEEQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYICGKHLDHGVL 303

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG+           PYW+++NSWG      G++KI RG N CG++ +
Sbjct: 304 LVGYGEGAYAPIRFKEKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSM 353


>gi|516865|emb|CAA52403.1| putative thiol protease [Arabidopsis thaliana]
          Length = 313

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 153/347 (44%), Gaps = 79/347 (22%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEE-----IL 117
           F  K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E     + 
Sbjct: 3   FKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLG 62

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
            K GFK  +   +  +   + +             P+ +DWR +    P  +Q +CGSCW
Sbjct: 63  VKGGFKLPKDANQAPILPTQNL-------------PEEFDWRDRGAVTPVKNQGSCGSCW 109

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC--- 234
           +FS  G                        LEG + + TGKLV  S+ QLV+C  +C   
Sbjct: 110 SFSTTG-----------------------ALEGAHFLATGKLVSLSEQQLVDCDHECDPE 146

Query: 235 ------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                 SGC+G     + EYT    GL  EKDYPY   +G    C  D+SK+        
Sbjct: 147 EEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGS--CKLDRSKIVASVSNFS 204

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVG 343
           +     + +   L K GPL+V +N+  +  Y G           PY     L H VLLVG
Sbjct: 205 VVSINEDQIAANLIKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVLLVG 257

Query: 344 YG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           YG       +    PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 258 YGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 304


>gi|7211743|gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 368

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 155/350 (44%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 46  NADHHFTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDSTPT 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   K  F    R   +  AD  K   +L   E    +P  +DWR +    P  +Q  CG
Sbjct: 106 EFRRK--FLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDRGAVTPVKNQGTCG 157

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
            CW+FS  G                        LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 158 LCWSFSTTGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHEC 194

Query: 235 S---------GCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                     GC+G     + EYT +AG L  E+DYPY   + +   C +DK+K+     
Sbjct: 195 DPEEAGSCDFGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDLQV--CRFDKTKIAAKVA 252

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 253 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 305

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 355


>gi|1619903|gb|AAB16996.1| thiol protease isoform B, partial [Glycine max]
          Length = 319

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 144/337 (42%), Gaps = 70/337 (20%)

Query: 75  RGRQYANDEEIKERFEYFKQDGHKKH-------ERYGTSEFSDRSPEEILCKTGFKWSER 127
           R R YA  EE   RF  FK +  +           +G ++FSD +P E           R
Sbjct: 13  RPRPYATKEEHDHRFGVFKSNLRRASCTPSSTPRVHGVTKFSDLTPAEF---------RR 63

Query: 128 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSN 187
            +  + A R         +     +P  +DWR K       DQ  CGSCW+FS  G    
Sbjct: 64  QFLGLKAVRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTG---- 119

Query: 188 YLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCD 238
                               LEG Y + TG+LV  S+ QLV+C   C         SGC+
Sbjct: 120 -------------------ALEGAYYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCN 160

Query: 239 GCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 297
           G     + EY  Q+G ++ EKDYPY   +G    C +DK+KV        +     E + 
Sbjct: 161 GGLMNNAFEYILQSGGVQKEKDYPYTGRDG---TCKFDKTKVAATVSNYSVVCLDEEQIA 217

Query: 298 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYGKQ------ 347
             L K GPL+V +N+  +  Y G           PY     L H VLLVGYG+       
Sbjct: 218 ANLVKNGPLAVAINAVFMQTYVGG-------VSCPYICGKHLDHGVLLVGYGEGAYAPIR 270

Query: 348 -DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             N PYW+++NSWG    + G+ +I RG N CG++ +
Sbjct: 271 FKNKPYWIIKNSWGESWGENGYDEICRGRNVCGVDSM 307


>gi|390339264|ref|XP_791714.3| PREDICTED: putative cysteine proteinase CG12163-like
           [Strongylocentrotus purpuratus]
          Length = 453

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 67/336 (19%)

Query: 66  ETFKAFIVKRGRQYANDEEIKE---RFEYFKQDG---------HKKHERYGTSEFSDRSP 113
           + F  F++   R+Y  ++   E   R+  F Q+           +   +YG ++F+D + 
Sbjct: 154 DLFDKFLMTFKREYRQNDGTNEYEYRYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTE 213

Query: 114 EEI-------LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            E        L KTG K      +                   GPVP+ +DWR      P
Sbjct: 214 AEFRKLQSGPLKKTGIKKQAAIPQ-------------------GPVPEEYDWRTHGAVTP 254

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             +Q  CGSCWAFS  G                        +EGQ+ IK G+L+  S+ +
Sbjct: 255 VKNQGMCGSCWAFSAIGN-----------------------MEGQWQIKKGELISLSEQE 291

Query: 227 LVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 285
           LV+C K   GC+G     + E   +  G  SE+ YPY+   GE  KC ++ + V++    
Sbjct: 292 LVDCDKVDGGCEGGEMSDAYEAIIKLGGAMSEEKYPYR---GENEKCKFNMTDVRVKI-N 347

Query: 286 DFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
            +++ + +ET M   L  +GP+S+ +N+ ++  Y G         CSP  L H VL+VGY
Sbjct: 348 GYVNISKNETEMAGWLAAHGPISIGINALMMQFYFGGIAHPWKIFCSPDSLDHGVLIVGY 407

Query: 345 GKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
             +D  PYW+V+NSWG    +EG++ + RG+  CG+
Sbjct: 408 SVKDGEPYWIVKNSWGKDWGEEGYYLVYRGDGTCGL 443


>gi|343472324|emb|CCD15484.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 153/341 (44%), Gaps = 47/341 (13%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQTLVSCDPT 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C+G F + +  +   +++  + +E+ YPY ++ G          KV      D++  
Sbjct: 185 EYACEGGFMDNAFRWIISSNKGKVFTEQSYPY-SSGGRNVPACNMSGKVVGANISDYVDL 243

Query: 291 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
              E  + + L K GP+SV++++     Y G  +     +C    L HAVLLVGY     
Sbjct: 244 PQDENAIAEWLAKNGPVSVIVDATSFQSYTGGVL----TSCLSKILNHAVLLVGYDDTSK 299

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
            PYW+++NSW     ++G+ +IE+G N C +++ A  A ++
Sbjct: 300 PPYWIIKNSWSEKWGEKGYIRIEKGTNQCLVQEYASSALVN 340


>gi|113819972|gb|AAH04054.2| Ctsf protein [Mus musculus]
          Length = 332

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 35  FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 92

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 93  -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 145

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 146 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVDKACL 182

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y    +  GLE+E DY Y+   G    C +     K++             
Sbjct: 183 GGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENK 237

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 238 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 297

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 298 KNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 332


>gi|426252094|ref|XP_004019753.1| PREDICTED: cathepsin F isoform 1 [Ovis aries]
          Length = 460

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 59/340 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 163 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 220

Query: 119 KTGFKWSERT--YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                   RT     ++ D       L +   D P P  WDWR K       DQ  CGSC
Sbjct: 221 --------RTIYLNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGMCGSC 271

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS+ G                        +EGQ+ +K G L+  S+ +L++C K    
Sbjct: 272 WAFSVTGN-----------------------VEGQWFLKRGTLLSLSEQELLDCDKTDKA 308

Query: 237 CDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G    PS  Y+      GLE+E DY Y+   G    C++   K K++           
Sbjct: 309 CLGGL--PSNAYSAIRTLGGLETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNE 363

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           + +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +   
Sbjct: 364 QKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSAT 420

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 421 PFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVIN 460


>gi|297816790|ref|XP_002876278.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322116|gb|EFH52537.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 169/388 (43%), Gaps = 78/388 (20%)

Query: 43  QVVARVDTLAIEGSLTFDNE----NILET-----FKAFIVKRGRQYANDEEIKERFEYFK 93
            VVA V+ L I   +T D      N+L T     F+ F+   G+ Y+  EE   R   F 
Sbjct: 18  HVVASVEDLTIR-QVTADERRVRPNLLGTHTESKFRVFMSDYGKNYSTREEYIHRLGIFA 76

Query: 94  QDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADR-EKVEKMLM 144
           ++  K  E         +G ++FSD + EE      FK        +   R   V     
Sbjct: 77  KNVLKAAEHQMMDPTAVHGVTQFSDLTEEE------FKRMYTGVADVGGSRGHAVGAEAP 130

Query: 145 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
            VE DG +P+ +DWR+K       +Q ACGSCWAFS  G                     
Sbjct: 131 MVEVDG-LPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA-------------------- 169

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVEC---------AKQC-SGCDGCFFEPSIEYTHQAG- 253
               EG + + TGKL+  S+ QLV+C          K C +GC G     + EY  +AG 
Sbjct: 170 ---AEGAHFVSTGKLLSLSEQQLVDCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGG 226

Query: 254 LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD 313
           LE E+ YPY    G++  C +D  KV +            + +   L + GPL+V LN+ 
Sbjct: 227 LEEERSYPY---TGKRGHCKFDPEKVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAV 283

Query: 314 LIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIG 363
            +  Y G    P+      CS   + H VLLVGYG +        N PYW+++NSWG   
Sbjct: 284 FMQTYIGGVSCPL-----ICSKRKVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKW 338

Query: 364 PDEGFFKIERGNNACGIEQIAGYATIDV 391
            + G++K+ RG++ CGI  +       V
Sbjct: 339 GENGYYKLCRGHDICGINSMVSAVATQV 366


>gi|410974700|ref|XP_003993781.1| PREDICTED: cathepsin F [Felis catus]
          Length = 459

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 152/339 (44%), Gaps = 57/339 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 162 FKEFVTTYNRTYGTQEEAQWRLSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEF-- 219

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 177
                   R        +E   KM+   +  G   P  WDWR K       +Q  CGSCW
Sbjct: 220 --------RAIYLNPLLKENRNKMMHLAKSIGDHAPPEWDWRTKGAVTNVKNQGMCGSCW 271

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AFS+ G                        +EGQ+ +K G L+  S+ +L++C K    C
Sbjct: 272 AFSVTGN-----------------------VEGQWFLKQGDLLSLSEQELLDCDKVDKAC 308

Query: 238 DGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            G    PS  Y    +  GLE+E DY Y   +G    C++   K K++           +
Sbjct: 309 LGGL--PSNAYLAIKNLGGLETEDDYSY---SGHLQTCSFSAKKAKVYINDSVELSQNEQ 363

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +  IP
Sbjct: 364 KLAAWLAKKGPISVAINAFGMQFYRRGISHPLRP---LCSPWLIDHAVLLVGYGNRSGIP 420

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +W ++NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 421 FWAIKNSWGTDWGEEGYYYLYRGSGACGVNAMASSAVVN 459


>gi|301775254|ref|XP_002923050.1| PREDICTED: cathepsin H-like [Ailuropoda melanoleuca]
          Length = 307

 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 158/337 (46%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           FK+++V+  ++Y++ EE + R   F     K + H       + G ++FSD S  EI  K
Sbjct: 7   FKSWMVQHQKKYSS-EEYQHRLRTFVGNWRKINAHNAGNHTFKMGLNQFSDMSFAEI--K 63

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN-VTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P   DWRKK     P  +Q  CGSCW 
Sbjct: 64  RKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGGCGSCWT 115

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AIKTGKL+  ++ QLV+CA+  +  G
Sbjct: 116 FSTTG-----------------------ALESAIAIKTGKLLSLAEQQLVDCAQDFNNHG 152

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPYK  +G+   C +  SK   F  KD   +  N  
Sbjct: 153 CQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD---CKFQPSKAIAFV-KDVANITINDE 208

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           + M + +  + P+S    +  D +    G     +  +C  +P  + HAVL VGYG+Q+ 
Sbjct: 209 QAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSSTSCHKTPDKVNHAVLAVGYGEQNG 265

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 266 VPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 302


>gi|13124026|sp|Q9WGE0.1|CATV_NPVHC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|4884631|gb|AAD31760.1|AF120926_1 cysteine proteinase [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 53/352 (15%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-------- 93
           +++V  +    +  S  +D       F+ F+ K  + Y+++ E   RF+ F+        
Sbjct: 2   NKIVLCLLVFCVAHSAAYDLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIII 61

Query: 94  QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTY---ERIVADREKVEKMLMEVEKD 149
           ++ +    +Y  ++FSD S +E + K TG     +T    E +V +R             
Sbjct: 62  KNQNDTTAQYEINKFSDLSKDETISKYTGLALPLQTQNFCEVVVLNRPP---------DK 112

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
           GP+   +DWR+ N      +Q  CG+CWAF+                           LE
Sbjct: 113 GPLE--FDWRRLNKVTSVKNQGICGACWAFATLAS-----------------------LE 147

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
            Q+AIK  +L+  S+ QL++C    +GC+G     + E   Q  G+++E DYPY+ ++G 
Sbjct: 148 SQFAIKHNQLINLSEQQLIDCDYVDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSDGN 207

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
                           +    F   E +K +L   GP+ V +++  I +Y    +R    
Sbjct: 208 CRVDVAKFVVKVKKCYRYIAVF--EEKLKDLLRIVGPIPVAIDASDIVNYRRGIMR---- 261

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            CS Y   HAVLLVGYG ++N+PYW+++N+WG    ++G+F++++  NACGI
Sbjct: 262 YCSNYGFNHAVLLVGYGVENNVPYWILKNTWGEDWGEQGYFRVQQNINACGI 313


>gi|338712411|ref|XP_001491536.3| PREDICTED: cathepsin F [Equus caballus]
          Length = 459

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 145/335 (43%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y   EE + R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 162 FKHFVTTYNRTYETKEEAQWRMSIFASNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 219

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +   E   KM          P  WDWR K       DQ  CGSCWA
Sbjct: 220 -------RTIYLNPLLKEEPGVKMRRAKSVGDSAPPEWDWRSKGAVTEVKDQGMCGSCWA 272

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 273 FSVTGN-----------------------VEGQWFLNRGALLSLSEQELLDCDKVDKACM 309

Query: 239 GCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y+      GLE+E DY Y   +G    C++   K K++           + 
Sbjct: 310 GGL--PSNAYSAIKTLGGLETEDDYSY---HGHLQACSFSAEKAKVYINDSVELTKNEQK 364

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L K GP+SV +N+  +  Y           CSP+ + HAVLLVGYG +  +P+W +
Sbjct: 365 LAAWLAKKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAVPFWAI 424

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 425 KNSWGTDWGEEGYYYLYRGSGACGVNTMASSAVVN 459


>gi|96979798|ref|YP_611001.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|37077647|sp|Q91CL9.1|CATV_NPVAP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|16041073|dbj|BAB69773.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|94983331|gb|ABF50271.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|146229694|gb|ABQ12259.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
          Length = 324

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 159/329 (48%), Gaps = 55/329 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F+ F+ K  + Y+++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISK 87

Query: 120 -TGFKW---SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
            TG       +   E +V DR             GP+   +DWR+ N      +Q  CG+
Sbjct: 88  YTGLSLPLQKQNFCEVVVLDRPP---------DKGPL--EFDWRRLNKVTSVKNQGMCGA 136

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAF+  G                        LE Q+AIK  +L+  S+ QL++C     
Sbjct: 137 CWAFATLGS-----------------------LESQFAIKHDQLINLSEQQLIDCDFVDV 173

Query: 236 GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GS 293
           GCDG     + E   +  G+++E DYPY+  NG    C  + +K  +   K + +     
Sbjct: 174 GCDGGLLHTAYEAVMNMGGIQAENDYPYEANNG---PCRVNAAKFVVRVKKCYRYVTLFE 230

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
           E +K +L   GP+ V +++  I  Y    IR     C  + L HAVLLVGYG ++ IP+W
Sbjct: 231 EKLKDLLRIVGPIPVAIDASDIVGYKRGIIR----YCENHGLNHAVLLVGYGVENGIPFW 286

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
           +++N+WG    ++G+F++++  NACGI+ 
Sbjct: 287 ILKNTWGADWGEQGYFRVQQNINACGIKN 315


>gi|4826565|emb|CAB42884.1| cathepsin F [Mus musculus]
          Length = 462

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 276 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVDKACL 312

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y    +  GLE+E DY Y+   G    C +     K++             
Sbjct: 313 GGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENK 367

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 368 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 427

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 428 KNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462


>gi|2511695|emb|CAB17077.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 377

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 163/374 (43%), Gaps = 81/374 (21%)

Query: 53  IEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------- 102
           I   L   +  +L T   F  F+   G++Y+  EE  +R E F  +  +  E        
Sbjct: 35  IAKKLKLQDNQLLRTEKKFNVFMENYGKKYSTREEYLQRLEIFAGNMLRAPENQALDPTA 94

Query: 103 -YGTSEFSDRSPEEIL-----CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAW 156
            +G ++FSD + +E          GF W+     R VA   KV+ +          P+ +
Sbjct: 95  IHGVTQFSDLTEDEFQRHYTGVNGGFPWNNGV--RDVAPPLKVDGL----------PEDF 142

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR+K        Q  CGSCWAFS  G                        +EG   I T
Sbjct: 143 DWREKGAVTEVKMQGKCGSCWAFSTTGS-----------------------IEGANFIAT 179

Query: 217 GKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNAN 266
           GKL+  S+ QLV+C  QC         +GC G     + +Y  Q+G LE E  YPY  A 
Sbjct: 180 GKLLNLSEQQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESSYPYTGAK 239

Query: 267 GEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TP 322
           GE   C +D  KV +    +F +    E  +   L K+GPL+V LN+  +  Y G    P
Sbjct: 240 GE---CKFDPGKVAVRI-TNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTYIGGVSCP 295

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGN 375
           +      CS   L H VLLVGY  +        N PYW+++NSWG     +G++K+ RG+
Sbjct: 296 L-----ICSKKWLNHGVLLVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGYYKLCRGH 350

Query: 376 NACGIEQIAGYATI 389
             CG+  +   A +
Sbjct: 351 GMCGMNTMVSTAMV 364


>gi|388513209|gb|AFK44666.1| unknown [Lotus japonicus]
 gi|388514955|gb|AFK45539.1| unknown [Lotus japonicus]
          Length = 352

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 59/341 (17%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S      
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLS------ 105

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                W E   +++ A +     ++   +  D  +P   DWRK+++     DQA CGSCW
Sbjct: 106 -----WDEFRTQKLGAAQNCSATLIGNHKLTDAVLPAEKDWRKESIVSEVKDQAHCGSCW 160

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  YA   GK +  S+ QLV+CA   +  
Sbjct: 161 TFSTTG-----------------------ALEAAYAQAHGKNISLSEQQLVDCAGAFNNF 197

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC+G     + EY  +  G+  EK+YPY  A  E  K   +   V++    + +     +
Sbjct: 198 GCNGGLPSQAFEYIKYNGGIALEKEYPY-TAKDEACKFTAENVAVRVLDSVN-ITLGAED 255

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQD 348
            +K  +    P+SV          +G  + K      +TC  +P D+ HAVL VGYG ++
Sbjct: 256 ELKHAVAFARPVSVAFQV-----VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVEN 310

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           N+PYW+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 311 NVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIV 351


>gi|9845246|ref|NP_063914.1| cathepsin F precursor [Mus musculus]
 gi|12643321|sp|Q9R013.1|CATF_MOUSE RecName: Full=Cathepsin F; Flags: Precursor
 gi|6467384|gb|AAF13147.1|AF136280_1 cathepsin F precursor [Mus musculus]
 gi|7141165|gb|AAF37228.1|AF217224_1 cathepsin F [Mus musculus]
 gi|26344728|dbj|BAC36013.1| unnamed protein product [Mus musculus]
 gi|37589148|gb|AAH58758.1| Cathepsin F [Mus musculus]
 gi|148701127|gb|EDL33074.1| cathepsin F, isoform CRA_b [Mus musculus]
          Length = 462

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 276 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVDKACL 312

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y    +  GLE+E DY Y+   G    C +     K++             
Sbjct: 313 GGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENK 367

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 368 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 427

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 428 KNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462


>gi|388491952|gb|AFK34042.1| unknown [Lotus japonicus]
          Length = 352

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 156/340 (45%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  K G++Y + EEI+ RF  F ++       +KK   Y  G + F+D S +E   
Sbjct: 52  SFARFASKYGKRYDSVEEIQHRFRIFSENLELIKSTNKKRLSYKLGLNHFADLSWDEF-- 109

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    + +     +    K+   ++  EKD        WRK+++     DQA CGSCW 
Sbjct: 110 RTQKLGAAQNCSATLIGNHKLTDAVLSAEKD--------WRKESIVSEVKDQAHCGSCWT 161

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS                         G LE  YA   GK +  S+ QLV+CA   +  G
Sbjct: 162 FST-----------------------TGALEAAYAQAHGKNISLSEQQLVDCAGAFNNFG 198

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY  +  G+  EK+YPY  A  E  K   +   V++    + +     + 
Sbjct: 199 CNGGLPSQAFEYIKYNGGIALEKEYPY-TAKDEASKFTAENVAVRVLDSVN-ITLGAEDE 256

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGHAVLLVGYGKQDN 349
           +K  +    P+SV          +G  + K      +TC  +P D+ HAVL VGYG ++N
Sbjct: 257 LKHAVAFARPVSVAFQV-----VDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVENN 311

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYW+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 312 VPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCASYPIV 351


>gi|426252096|ref|XP_004019754.1| PREDICTED: cathepsin F isoform 2 [Ovis aries]
          Length = 477

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 152/340 (44%), Gaps = 59/340 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE   R   F  +  +  +         +YG ++FSD + EE   
Sbjct: 180 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEEEF-- 237

Query: 119 KTGFKWSERT--YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                   RT     ++ D       L +   D P P  WDWR K       DQ  CGSC
Sbjct: 238 --------RTIYLNPLLKDAPGRNMRLAQPVTDVPPPQ-WDWRNKGAVTDVKDQGMCGSC 288

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS+ G                        +EGQ+ +K G L+  S+ +L++C K    
Sbjct: 289 WAFSVTGN-----------------------VEGQWFLKRGTLLSLSEQELLDCDKTDKA 325

Query: 237 CDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G    PS  Y+      GLE+E DY Y+   G    C++   K K++           
Sbjct: 326 CLGGL--PSNAYSAIRTLGGLETEDDYSYR---GHLQTCSFSAEKAKVYINDSVELSKNE 380

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           + +   L K GP+SV +N+  +  Y      P+R     CSP+ + HAVLLVGYG +   
Sbjct: 381 QKLAAWLAKKGPISVAINAFGMQFYRHGISHPLRP---LCSPWLIDHAVLLVGYGNRSAT 437

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + RG+ ACG+  +A  A I+
Sbjct: 438 PFWAIKNSWGTNWGEEGYYYLHRGSGACGVNIMASSAVIN 477


>gi|340503366|gb|EGR29962.1| hypothetical protein IMG5_145110 [Ichthyophthirius multifiliis]
          Length = 1095

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 42/296 (14%)

Query: 103  YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD----GPVPDAWDW 158
            +G ++FSD SP++   +   K +++   +++  +++ +K+   +++D      VP+ +DW
Sbjct: 834  FGHTKFSDLSPQQ-FAQKHLKLNQK---KLLQVKKETKKLTTPIQQDITVEENVPEQFDW 889

Query: 159  RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
            R +NV      Q  CGSCW FS  G                       ++E QYAIK  K
Sbjct: 890  RDRNVVTEPKYQNTCGSCWTFSTTG-----------------------VIESQYAIKHQK 926

Query: 219  LVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDY-PYKNANGEKFKCAYDK 276
            LV FS+ QLV+C     GC G     + +Y  Q+ GLE  +DY  YKN   +K KC +D 
Sbjct: 927  LVPFSEQQLVDCDDINDGCHGGLMTDAYKYLQQSGGLEFAEDYGDYKN---KKEKCKFDL 983

Query: 277  SKVKLFTGKDFLHFN-GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 335
            +KV+    K++   +   E +KK LY+ GP++  +N+ L+  Y        D      D+
Sbjct: 984  NKVQAKI-KEWQQIDEDEEIIKKQLYQNGPIAAGVNARLLQFYKSGIF---DPKECDSDI 1039

Query: 336  GHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             HA+L+VGYG ++D   YW+++N WG     +G+FK+ RG   CGI   A  A I+
Sbjct: 1040 NHAILIVGYGVEKDGQKYWIIKNQWGKDWGMDGYFKLARGKKQCGIHTYASIAFIE 1095


>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis]
 gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 171/398 (42%), Gaps = 79/398 (19%)

Query: 15  IMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVK 74
           + LI   FL   +        L D +  QVV  V+   +              F AF  K
Sbjct: 7   LSLIVFAFLSSSILFTATSDELDDPLIRQVVPDVEDYLLSAQ---------HHFTAFKAK 57

Query: 75  RGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSE 126
            G+ YA  EE   RF+ FK +  +  KH+       +G ++FSD +P E           
Sbjct: 58  FGKNYATQEEHDYRFKVFKANLRRAQKHQLMDPSAVHGVTKFSDLTPREF---------R 108

Query: 127 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
           R Y  +   R   +     +     +P+ +DWR         +Q +CGSCW+FS AG   
Sbjct: 109 RQYLGLKKLRLPADAHEAPILPTDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGA-- 166

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGC 237
                                LEG + + TG+LV  S+ QLV+C  +C         SGC
Sbjct: 167 ---------------------LEGAHFLATGELVSLSEQQLVDCDHECDPTEYGACDSGC 205

Query: 238 DGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
           +G     + EY  +AG LE E+DYPY  +  ++  C ++++K+        +     + +
Sbjct: 206 NGGLMTNAFEYILKAGGLEREEDYPYTGS--DRGPCKFERAKIAASVNNFSVVSVDEDQI 263

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG----HAVLLVGYG------- 345
              L + GPL+V +N+  +  Y G           PY       H V+LVGYG       
Sbjct: 264 AANLVQNGPLAVGINAVFMQTYIGG-------VSCPYICSKRQDHGVVLVGYGSAGYAPV 316

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           +  + P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 317 RLKDKPFWIIKNSWGENWGENGYYKICRGRNVCGVDAM 354


>gi|111073719|dbj|BAF02548.1| triticain gamma [Triticum aestivum]
          Length = 365

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 146/338 (43%), Gaps = 54/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E++ RF  F +   +           R G + FSD S       
Sbjct: 64  FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLSYRLGINRFSDMS------- 116

Query: 120 TGFKWSERTYERIVADREKVEKMLME--VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
               W E    R+ A +     +     +     +P+  DWR+  +  P  DQ+ CGSCW
Sbjct: 117 ----WEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKDQSHCGSCW 172

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y   TGK +  S+ QLV+CA   +  
Sbjct: 173 TFSTTGA-----------------------LEAAYTQATGKNISLSEQQLVDCAGGFNNF 209

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNG 292
           GC G     + EY  +  G+++E+ YPYK  NG    C Y  + + V++    + +  N 
Sbjct: 210 GCSGGLPSQAFEYIKYNGGIDTEESYPYKGVNG---VCHYKAENAVVQVLDSVN-ITLNA 265

Query: 293 SETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            + +K  +    P+SV     +    Y       +    +P D+ HAVL VGYG ++ +P
Sbjct: 266 EDELKNAVGLVRPVSVAFEVINGFRQYKSGVYSSDHCGTTPDDVNHAVLAVGYGVENGVP 325

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWL++NSWG    D G+FK+E G N C +   A Y  +
Sbjct: 326 YWLIKNSWGADWGDNGYFKMEMGKNMCAVATCASYPIV 363


>gi|11066228|gb|AAG28508.1|AF197480_1 cathepsin F [Mus musculus]
          Length = 462

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 222

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 223 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 275

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 276 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVDKACL 312

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y    +  GLE+E DY Y+   G    C +     K++             
Sbjct: 313 GGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENK 367

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 368 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 427

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 428 KNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 462


>gi|258406688|gb|ACV72067.1| putative cysteine protease [Lathyrus sativus]
          Length = 350

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 151/340 (44%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G+ Y + +E+K RF+ F ++       +K+   Y  G + F+D        
Sbjct: 50  SFARFANRYGKLYDSVDEMKLRFKIFSENLELIRSTNKRRLSYKLGVNHFAD-------- 101

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 176
              + W E    R+ A  +     L    K  D  +PD  DWRK+ +     DQ  CGSC
Sbjct: 102 ---WTWEEFKSHRLGA-AQNCSATLKGNHKITDANLPDEKDWRKEGIVSEVKDQGHCGSC 157

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE  YA   GK +  S+ QLV+CA   + 
Sbjct: 158 WTFSTTGA-----------------------LESAYAQAFGKNISLSEQQLVDCAGAFNN 194

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG 292
            GC G     + EY  +  GLE+E+ YPY  +NG    C +    V L   G   +    
Sbjct: 195 FGCSGGLPSQAFEYIKYNGGLETEETYPYTGSNG---LCKFTSENVALKVLGSVNITLGS 251

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC---SPYDLGHAVLLVGYGKQDN 349
            + +K  +    P+SV    +++HD+          T    +P D+ HAVL VGYG +D 
Sbjct: 252 EDELKHAVAFARPVSVAF--EVVHDFRLYKSGVYTSTACGNTPMDVNHAVLAVGYGIEDG 309

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           IPYW ++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 310 IPYWHIKNSWGGDWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|312282841|dbj|BAJ34286.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 156/341 (45%), Gaps = 59/341 (17%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EEIK RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRLSYKLGVNQFADLTWQE--- 114

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
              F+ ++    +  +   K    L E      +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 115 ---FQRNKLGAAQNCSATLKGSHKLTEA----ALPETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C+G     + EY     GL++E+ YPY   +G    C Y    V +       +     +
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEEAYPYTGKDG---TCKYSAENVGVQVLDSVNITLGAED 261

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQD 348
            +K  +    P+S+    +++  +    + K+    D  C  +P D+ HAVL VGYG +D
Sbjct: 262 ELKHAVGLVRPVSIAF--EVVKSFR---LYKSGVYTDSHCGNTPMDVNHAVLAVGYGIED 316

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +PYWL++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 317 GVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVV 357


>gi|357438145|ref|XP_003589348.1| Cysteine proteinase [Medicago truncatula]
 gi|355478396|gb|AES59599.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 164/364 (45%), Gaps = 66/364 (18%)

Query: 49  DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 102
           D L I   +    ++IL     F +F  K  + YA  EE   RF  FK +    K H++ 
Sbjct: 29  DDLLIRQVVDTAEDHILNAEHHFTSFKSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKL 88

Query: 103 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 157
                +G ++FSD +  E   +     ++R   R+ A  +K       +     +P+ +D
Sbjct: 89  DPSAQHGITKFSDLTASEFR-RQFLGLNKRL--RLPAHAQKAP-----ILPTNNLPEDFD 140

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR+K    P  DQ +CGSCWAFS  G                        LEG   + TG
Sbjct: 141 WREKGAVTPVKDQGSCGSCWAFSTTG-----------------------ALEGANYLATG 177

Query: 218 KLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANG 267
           KL   S+ QLV+C   C         SGC+G     + EY  Q+G + SEKDY Y   +G
Sbjct: 178 KLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTGRDG 237

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKN 326
               C +DKSKV        +     + +   L K GPL+V +N+  +  Y +G      
Sbjct: 238 S---CKFDKSKVVASVSNFSVVSLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC--- 291

Query: 327 DETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
              C+   L H VLL+G+G       +    PYW+++NSWG    +EG++KI RG N CG
Sbjct: 292 PYICAKARLDHGVLLLGFGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCG 351

Query: 380 IEQI 383
           ++ +
Sbjct: 352 VDSM 355


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 70/342 (20%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGF 122
           F  K  + Y + EE   RF  FK +  +  +H++      +G ++FSD +  E      F
Sbjct: 62  FKRKFKKSYLSQEEHDYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAE------F 115

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 182
           +       ++   ++  +  ++       +P+ +DWR+K   GP  +Q +CGSCW+FS  
Sbjct: 116 RKQVLGLRKLRLPKDANKAPILPTND---LPEDFDWREKGAVGPVKNQGSCGSCWSFSTT 172

Query: 183 GKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC-------- 234
           G                        LEG + + TG+LV  S+ QLV+C  +C        
Sbjct: 173 G-----------------------ALEGAHFLATGELVSLSEQQLVDCDHECDPEEPGSC 209

Query: 235 -SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
            SGC+G     + EYT +AG L  E+DYPY     ++  C +DK KV        +    
Sbjct: 210 DSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGM--DRGACKFDKDKVAAGVANFSVVSLD 267

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG--- 345
            + +   L K GPL+V  N+  +  Y G           PY     L H VLLVGYG   
Sbjct: 268 EDQIAANLVKNGPLAVATNAVFMQTYIGG-------VSCPYICSRRLDHGVLLVGYGSAG 320

Query: 346 ----KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
               +    PYW+++NSWG    + GF+KI RG N CG++ +
Sbjct: 321 YAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSM 362


>gi|224082940|ref|XP_002306900.1| predicted protein [Populus trichocarpa]
 gi|118481986|gb|ABK92924.1| unknown [Populus trichocarpa]
 gi|222856349|gb|EEE93896.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 151/346 (43%), Gaps = 61/346 (17%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RYGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   RF  FK +    KKH+       +G ++FSD +P+
Sbjct: 46  NAEHHFTTFKSKFGKNYATQEEHDYRFSVFKANLLRAKKHQIMDPTAAHGVTKFSDLTPK 105

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E        +  +        R   +     +   G +P  +DWR         DQ +CG
Sbjct: 106 E--------FRRQLLGLKRRLRLPTDANKAPILPTGDLPTDFDWRDHGAVTSVKDQGSCG 157

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C  +C
Sbjct: 158 SCWSFSATG-----------------------ALEGAHYLATGELVSLSEQQLVDCDHEC 194

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC G     + EY  +AG LE EKDYPY     ++  C ++KSKV     
Sbjct: 195 DPEEYGACDSGCSGGLMNNAFEYALKAGGLEREKDYPY--TGNDRGACKFEKSKVAASVS 252

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
              +     + +   L K+GPLSV +N+  +  Y G         CS +   H VLLVGY
Sbjct: 253 NFSVVSLDEDQIAANLVKHGPLSVAINAVFMQTYIGG--VSCPYICSKHQ-DHGVLLVGY 309

Query: 345 GKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G            P+W+++NSWG    + G++KI R  N CG++ +
Sbjct: 310 GAAGYAPIRFKEKPFWIIKNSWGENWGENGYYKICRARNICGVDSM 355


>gi|297824991|ref|XP_002880378.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326217|gb|EFH56637.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 152/350 (43%), Gaps = 79/350 (22%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILCK 119
           F  F  K G+ Y + EE   RF  FK +      H+K +   R+G ++FSD +  E   K
Sbjct: 47  FTLFKKKFGKDYGSIEEHYYRFSVFKANLRRAMRHQKMDPSARHGVTQFSDLTGSEFRRK 106

Query: 120 -----TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
                 GFK  +   +  +     +             P+ +DWR +    P  +Q +CG
Sbjct: 107 HLGVTGGFKLPKDANQAPILPTHNL-------------PEEFDWRDRGAVTPVKNQGSCG 153

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TGKLV  S+ QLV+C  +C
Sbjct: 154 SCWSFSTTGA-----------------------LEGAHFLATGKLVSLSEQQLVDCDHEC 190

Query: 235 ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT    GL  E+DYPY   +G    C  D+SK+     
Sbjct: 191 DPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGTDGGS--CKLDRSKIVASVS 248

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 249 NFSVVSINEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLNHGVL 301

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           L+GYG       +    PYW+++NSWG    + GF+KI +G N CG++ +
Sbjct: 302 LMGYGSSGYSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 351


>gi|354466410|ref|XP_003495667.1| PREDICTED: pro-cathepsin H-like [Cricetulus griseus]
          Length = 333

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 53/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ +  + Y++  E   R + F  +  K H         + G ++FSD +  EI  K
Sbjct: 33  FKSWMTQHQKTYSS-VEYNYRLKTFANNWRKIHAHNQRNHTFKMGLNQFSDMTFAEI--K 89

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP+P + DWRKK N      +Q +CGSCW 
Sbjct: 90  RKYLWSEP--QNCSATKGNY------LRGTGPLPPSMDWRKKGNFVSAVKNQGSCGSCWT 141

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 142 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQNFNNHG 178

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C+G     + EY  +  G+  E  YPY+  +G    C +D  K   F  KD   +  N  
Sbjct: 179 CEGGLPSQAFEYILYNKGIMGEDTYPYRGKDGH---CKFDPQKAIAFV-KDVANITLNDE 234

Query: 294 ETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           + M + +  Y P+S     +D    Y            +P  + HAVL VGYG++D IPY
Sbjct: 235 KAMVEAVALYNPVSFAFEVTDDFMLYQKGIYSSTSCHKTPDKVNHAVLAVGYGEKDGIPY 294

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           W+V+NSWG    D+G+F IERG N CG+   A Y    V
Sbjct: 295 WIVKNSWGTNWGDKGYFLIERGKNMCGLAACASYPIPQV 333


>gi|363737841|ref|XP_001232765.2| PREDICTED: pro-cathepsin H [Gallus gallus]
          Length = 327

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 149/328 (45%), Gaps = 53/328 (16%)

Query: 74  KRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-------EFSDRSPEEILCKTGFKWSE 126
           + GR+Y   E  +    +     H +    G S       +FSD +  E   K  + WSE
Sbjct: 33  QHGRRYEAGEYERRLRVFVGNKRHIEGHNAGNSSFQMALNQFSDMTFAEF--KKLYLWSE 90

Query: 127 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKF 185
              +   A R         +  DGP P+A DWRKK N   P  +Q  CGSCW FS  G  
Sbjct: 91  P--QNCSATRGNF------LRSDGPCPEAVDWRKKGNFVTPVKNQGPCGSCWTFSTTG-- 140

Query: 186 SNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFE 243
                                 LE   AI TGKL+  ++ QLV+CA+  +  GC G    
Sbjct: 141 ---------------------CLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPS 179

Query: 244 PSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET--MKKIL 300
            + EY  +  GL  E  YPY+  NG    C +   K   F  KD ++    +   M + +
Sbjct: 180 QAFEYILYNKGLMGEDAYPYRAQNG---TCKFQPDKAIAFV-KDVINITQYDEAGMVEAV 235

Query: 301 YKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNS 358
            K+ P+S    + SD +H   G       E  +P  + HAVL VGYG++D  PYW+V+NS
Sbjct: 236 GKHNPVSFAFEVTSDFMHYRKGVYSNPRCEH-TPDKVNHAVLAVGYGEEDGRPYWIVKNS 294

Query: 359 WGPIGPDEGFFKIERGNNACGIEQIAGY 386
           WGP+   +G+F IERG N CG+   A Y
Sbjct: 295 WGPLWGMDGYFLIERGKNMCGLAACASY 322


>gi|348551380|ref|XP_003461508.1| PREDICTED: pro-cathepsin H-like [Cavia porcellus]
          Length = 335

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 159/342 (46%), Gaps = 59/342 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           FK+++++  +QY+  E    R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 35  FKSWMMQHQKQYSAKEH-HHRQQTFARNWKKINAHNKGNHTFKMALNQFSDMSFDEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +             GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGS 293
           C+G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD ++   N  
Sbjct: 181 CEGGLPSQAFEYILYNKGIMGEDTYPYQGKDGH---CRFQPQKAIAFV-KDVVNITLNDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D I   +G     +  +C  +P  + HAVL VGYG Q+ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTEDFISYQSGI---YSSTSCHKTPDKVNHAVLAVGYGVQNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           +PYW+V+NSWG     +G+F IERG N CG+   A +    V
Sbjct: 294 VPYWIVKNSWGTAWGQDGYFLIERGKNMCGLAACASFPIPQV 335


>gi|9634237|ref|NP_037776.1| ORF16 cathepsin [Spodoptera exigua MNPV]
 gi|37077857|sp|Q9J8B9.1|CATV_NPVSE RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|6960476|gb|AAF33546.1|AF169823_16 ORF16 cathepsin [Spodoptera exigua MNPV]
          Length = 337

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 159/338 (47%), Gaps = 57/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEILCK 119
           F+ FI +  +QY +++E K R+  F+ +    ++K+ R     Y  + F+D    EI+ +
Sbjct: 40  FEKFITQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMPKNEIVIR 99

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPV----PDAWDWRKKNVTGPAGDQAACG 174
            TG           +A  E        +  DGP     P ++DWR  N      DQ  CG
Sbjct: 100 HTG-----------LASGELGLNFCETIVVDGPAQRQRPVSFDWRSMNKITSVKDQGMCG 148

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           +CW F+  G                        LE QYAIK  +L++ S+ QLV+C    
Sbjct: 149 ACWRFASLGA-----------------------LESQYAIKYDRLIDLSEQQLVDCDFVD 185

Query: 235 SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNG 292
            GCDG     + E   +  G+E E DY YK    E+  CA    K        + +    
Sbjct: 186 MGCDGGLIHTAYEQIMKMGGVEQEFDYSYK---AERQPCALKPHKFATGVRNCYRYVILN 242

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            E ++ +L   GP+++ +++  + DY G  +      C    L HAVLLVGYG ++N+PY
Sbjct: 243 EERLEDLLRYVGPIAIAVDAVDLTDYYGGIV----SFCENNGLNHAVLLVGYGVENNVPY 298

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACG-IEQIAGYATI 389
           W+++NSWG    ++G+ ++ RG N+CG I ++A  A +
Sbjct: 299 WIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336


>gi|56682917|gb|AAW21813.1| cysteine protease [Triticum aestivum]
          Length = 377

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 166/365 (45%), Gaps = 71/365 (19%)

Query: 53  IEGSLTFDNENILET-FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHE------RY 103
           + G+   DN+  L++    F+ + G+ Y + EE   R   FK +    ++H+       +
Sbjct: 37  VGGADPLDNDLELDSQLLGFVQRFGKTYRDAEEHAHRLSVFKANLRRARRHQMLDPSAEH 96

Query: 104 GTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           G ++FSD +P E      G K + R++ R +A       +L     DG +P+ +DWR   
Sbjct: 97  GVTKFSDLTPAEFRRTFLGLKTTRRSFLREMAGSAHDAPVL---PTDG-LPEDFDWRDHG 152

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  +Q +C SCW+FS +                       G LEG   + TGK+   
Sbjct: 153 AVGPVKNQGSCWSCWSFSAS-----------------------GALEGANYLATGKMEVL 189

Query: 223 SKSQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKC 272
           S+ QLV+C  +C         +GC+G     +  Y     GLE EKDYPY   +G    C
Sbjct: 190 SEQQLVDCDHECDPAEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKDG---TC 246

Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
            ++KSK+        +     E +   L +YGPL++ +N+  +  Y G           P
Sbjct: 247 KFEKSKIAASVQNFSVVAVDEEQIAANLVEYGPLAIGINAAYMQTYIGG-------VSCP 299

Query: 333 Y----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNA---C 378
           Y     L H VLLVGYG            PYW+++NSWG    D+G++KI RG+N    C
Sbjct: 300 YICGRHLDHGVLLVGYGASGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKC 359

Query: 379 GIEQI 383
           G++ +
Sbjct: 360 GVDSM 364


>gi|164605519|dbj|BAF98585.1| CM0216.510.nc [Lotus japonicus]
          Length = 360

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 149/345 (43%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  + G+ Y ++EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYVSEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CG+CW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILRTDN---LPKDFDWREHGAVTPVKNQGSCGACWSF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TGKLV  S+ QLV+C  +C     
Sbjct: 156 SATGA-----------------------LEGAHFLSTGKLVSLSEQQLVDCDHECDPEEA 192

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC G     + EY  +  G+  E+DYPY    G    C +D++K+        + 
Sbjct: 193 GSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAGGT--CKFDQTKIAASVANFSVV 250

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 251 SRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYG 303

Query: 346 KQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 SESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 348


>gi|343477445|emb|CCD11724.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 380

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 152/343 (44%), Gaps = 51/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G   + + ++   +++  + +E+ YPY +  G    C  DKS  K+   K   H 
Sbjct: 185 DFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPAC--DKSG-KVVGAKIRDHV 241

Query: 291 NGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +  E    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 242 DLPEDENAIAEWLAKNGPVAIAVDATSFQSYTGGVLT----SCISEHLDHGVLLVGYDDT 297

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSW     +EG+ +IE+G N C ++ +   A + 
Sbjct: 298 SKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNLPSSAVVS 340


>gi|3377952|emb|CAA08906.1| cysteine proteinase [Cicer arietinum]
          Length = 362

 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 155/347 (44%), Gaps = 64/347 (18%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F  F  K  + YA  EE   RF  FK +  K   H++      +G ++FSD +  
Sbjct: 42  NAEHHFTTFKSKFSKSYATKEEHDYRFGVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTAS 101

Query: 115 EILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E   +  G K       R+ A  +K       +     +P+ +DWR+K    P  DQ +C
Sbjct: 102 EFRRQFLGLK----KRLRLPAHAQKAP-----ILPTNNLPEDFDWREKGAVTPVKDQGSC 152

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        LEG   + TGKLV  S+ QLV+C   
Sbjct: 153 GSCWAFSTTG-----------------------ALEGANYLATGKLVSLSEQQLVDCDHV 189

Query: 234 C---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           C         SGC+G     + EY  Q+G +  E+DY Y   +G    C +DKSK+    
Sbjct: 190 CDPDEYNSCDSGCNGGLMNNAFEYLLQSGGVVREQDYSYTGRDGS---CKFDKSKIAASV 246

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGHAVLLV 342
               +     + +   L K GPL+V +N+  +  Y +G         C+   L H VLLV
Sbjct: 247 SNFSVVSVDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYICAKSRLDHGVLLV 303

Query: 343 GYG------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G+G      +    PYW+++NSWG    +EG++KI RG N CG++ +
Sbjct: 304 GFGNGFAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNICGVDSM 350


>gi|33945878|emb|CAE45589.1| papain-like cysteine proteinase-like protein 2 [Lotus japonicus]
          Length = 361

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 150/346 (43%), Gaps = 71/346 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF  FK + H+            +G + FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTRFSDLTPME---- 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +    +     ++  +    +P  +DWR+     P  +Q +CGSCW+F
Sbjct: 101 --FRHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWREHGAVTPVKNQGSCGSCWSF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC-AKQC---- 234
           S  G                        LEG + + TGKLV  S+ QLV+C  +QC    
Sbjct: 156 SATGA-----------------------LEGAHFLSTGKLVSLSEQQLVDCDHEQCDPEE 192

Query: 235 -----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                SGC G     + EY  +  G+  E+DYPY    G    C +D++K+        +
Sbjct: 193 AGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGTAGGT--CKFDQTKIAASVANFSV 250

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 344
                + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGY
Sbjct: 251 VSRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGY 303

Query: 345 GKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 GSESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSM 349


>gi|148701126|gb|EDL33073.1| cathepsin F, isoform CRA_a [Mus musculus]
          Length = 417

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK F+    R Y + EE + R   F ++  +  +         +YG ++FSD + EE   
Sbjct: 120 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEF-- 177

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                     Y   +  +E   KM      +   P  WDWRKK       +Q  CGSCWA
Sbjct: 178 -------HTIYLNPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWA 230

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS+ G                        +EGQ+ +  G L+  S+ +L++C K    C 
Sbjct: 231 FSVTGN-----------------------VEGQWFLNRGTLLSLSEQELLDCDKVDKACL 267

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G    PS  Y    +  GLE+E DY Y+   G    C +     K++             
Sbjct: 268 GGL--PSNAYAAIKNLGGLETEDDYGYQ---GHVQTCNFSAQMAKVYINDSVELSRNENK 322

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +   L + GP+SV +N+  +  Y           CSP+ + HAVLLVGYG + NIPYW +
Sbjct: 323 IAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNRSNIPYWAI 382

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +NSWG    +EG++ + RG+ ACG+  +A  A ++
Sbjct: 383 KNSWGSDWGEEGYYYLYRGSGACGVNTMASSAVVN 417


>gi|77735725|ref|NP_001029557.1| pro-cathepsin H precursor [Bos taurus]
 gi|115312126|sp|Q3T0I2.1|CATH_BOVIN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74267711|gb|AAI02387.1| Cathepsin H [Bos taurus]
 gi|296475480|tpg|DAA17595.1| TPA: cathepsin H precursor [Bos taurus]
          Length = 335

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 161/337 (47%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 119
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 35  FQSWMVQHQKKYSS-EEYYHRLQAFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 92  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGKL   ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAVAIATGKLPFLAEQQLVDCAQNFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD   +  N  
Sbjct: 181 CQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  + P+S    + +D +    G     +  +C  +P  + HAVL VGYG++  
Sbjct: 237 EAMVEAVALHNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 294 IPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 330


>gi|356530431|ref|XP_003533785.1| PREDICTED: cysteine proteinase [Glycine max]
          Length = 354

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 39/330 (11%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 127
           F  F+ + G+ Y ++EE+KER+E F Q+      R+  S    R P  +       W+  
Sbjct: 55  FARFVSRFGKSYQSEEEMKERYEIFSQN-----LRFIRSHNKKRLPYTLSVNHFADWTWE 109

Query: 128 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGK 184
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTG- 168

Query: 185 FSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFF 242
                                  LE  YA   GK +  S+ QLV+CA   +  GC G   
Sbjct: 169 ----------------------ALEAAYAQAFGKSISLSEQQLVDCAGPFNNFGCHGGLP 206

Query: 243 EPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSETMKKIL 300
             + EY  +  GLE+E+ YPY   +G    C +    V +       +     + +K  +
Sbjct: 207 SQAFEYIKYNGGLETEEAYPYTGKDG---VCKFSAENVAVQVLDSVNITLGAEDELKHAV 263

Query: 301 YKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 359
               P+SV     +  H Y       +    +  D+ HAVL VGYG ++ +PYWL++NSW
Sbjct: 264 AFVRPVSVAFQVVNGFHFYENGVFTSDTCGSTSQDVNHAVLAVGYGVENGVPYWLIKNSW 323

Query: 360 GPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           G    + G+FK+E G N CG+   A Y  +
Sbjct: 324 GESWGENGYFKMELGKNMCGVATCASYPIV 353


>gi|403258371|ref|XP_003921746.1| PREDICTED: pro-cathepsin H [Saimiri boliviensis boliviensis]
          Length = 336

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 154/341 (45%), Gaps = 66/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+ +EE   R + F  +  K +         +   ++F+D S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHHRLQTFASNWRKINAHNNGNHTFKMAVNQFADMSFAEI--K 92

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 144

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 145 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 181

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD  +      
Sbjct: 182 CQGGLPSQAFEYILYNKGIMGEDTYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDE 237

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           + M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 238 DAMVEAVALYNPVSFAF--EVTQDFMMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYG 290

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 291 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331


>gi|47779249|gb|AAT38521.1| cysteine protease [Bombyx mori NPV]
          Length = 323

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 51/360 (14%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 95
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 96  -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+ N      +Q  CG+CWAF+  G                        LE Q+A
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGS-----------------------LESQFA 150

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKC 272
           IK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYPY+  N     C
Sbjct: 151 IKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEANCRMGGVQLESDYPYEADNN---NC 207

Query: 273 AYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             + +K  L   KD   +     E +K +L   GP+ + +++  I +Y    I+     C
Sbjct: 208 RMNSNKF-LVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YC 262

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
               L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 263 FNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|440910969|gb|ELR60703.1| Cathepsin H, partial [Bos grunniens mutus]
          Length = 329

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 161/337 (47%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 119
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S +E+  K
Sbjct: 29  FQSWMVQHQKKYSS-EEYYHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFDEL--K 85

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 86  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWT 137

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGKL   ++ QLV+CA+  +  G
Sbjct: 138 FSTTGA-----------------------LESAVAIATGKLPFLAEQQLVDCAQNFNNHG 174

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD   +  N  
Sbjct: 175 CQGGLPSQAFEYIRYNKGIMGEDTYPYRGQDGD---CKYQPSKAIAFV-KDVANITLNDE 230

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  + P+S    + +D +    G     +  +C  +P  + HAVL VGYG++  
Sbjct: 231 EAMVEAVALHNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKG 287

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 288 IPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASF 324


>gi|15320768|ref|NP_203280.1| V-CATH [Epiphyas postvittana NPV]
 gi|37077652|sp|Q91GE3.1|CATV_NPVEP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15213236|gb|AAK85675.1| V-CATH [Epiphyas postvittana NPV]
          Length = 323

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 55/337 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 119
           F+ F+ +  +QY ++ E   R++ F+ +              Y  ++FSD S +E + K 
Sbjct: 28  FEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRNDTAVYKINKFSDLSKDETIAKY 87

Query: 120 TGFKWSERTY---ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
           TG      T    E +V DR             G  P  +DWR+ N      +Q  CG+C
Sbjct: 88  TGLSLPLHTQNFCEVVVLDRPP-----------GKGPLEFDWRRFNKITSVKNQGMCGAC 136

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAF+                           LE Q+AI   +L+  S+ Q+++C     G
Sbjct: 137 WAFATLAS-----------------------LESQFAIAHDRLINLSEQQMIDCDSVDVG 173

Query: 237 CDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSE 294
           C+G     + E      G++ E DYPY+++N     C  D +K  +   +   +     E
Sbjct: 174 CEGGLLHTAFEAIISMGGVQIENDYPYESSNN---YCRMDPTKFVVGVKQCNRYITIYEE 230

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            +K +L   GP+ V +++  I +Y    I+     C+   L HAVLLVGYG ++N+PYW+
Sbjct: 231 KLKDVLRLAGPIPVAIDASDILNYEQGIIK----YCANNGLNHAVLLVGYGVENNVPYWI 286

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATID 390
           ++NSWG    ++GFFKI++  NACGI+ ++A  A I+
Sbjct: 287 LKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAEIN 323


>gi|296213765|ref|XP_002753411.1| PREDICTED: pro-cathepsin H [Callithrix jacchus]
          Length = 336

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 155/341 (45%), Gaps = 66/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+ +EE  +R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMAKHHKTYSREEEYHQRLQTFASNWRKINAHNNGNHTFKMAVNQFSDMSFAEI--K 92

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK +   P  +Q ACGSCW 
Sbjct: 93  RKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGHFVSPVKNQGACGSCWT 144

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 145 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 181

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD  +      
Sbjct: 182 CQGGLPSQAFEYILYNNGIMGEDTYPYQ---GKDSDCKFQPGKAIGFV-KDVANITIYDE 237

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           + M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 238 DAMVEAVALYNPVSFAF--EVTQDFMMYKRGIYSSTSCHK-----TPDKVNHAVLAVGYG 290

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 291 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 331


>gi|290980288|ref|XP_002672864.1| predicted protein [Naegleria gruberi]
 gi|284086444|gb|EFC40120.1| predicted protein [Naegleria gruberi]
          Length = 356

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 156/353 (44%), Gaps = 60/353 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-KHERY-------GTSEFSDRSPEEIL 117
           + F  F  K  + Y   +    R++ FKQ+  + + E Y       G + FSD +P+E  
Sbjct: 35  QLFTQFRRKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMGVTRFSDLTPDEF- 93

Query: 118 CKTGFKWSERT----YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
            K+ F     T     E +   R+      + +++    P  +DWR+ N   P  DQ  C
Sbjct: 94  -KSMFLMKSYTPKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREHNAVTPVKDQGNC 152

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW FS  G                        +EG YA KTGKL+  S+ QLV+C   
Sbjct: 153 GSCWTFSTTGN-----------------------VEGMYAAKTGKLISLSEQQLVDCDHN 189

Query: 234 C----------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSK-VKL 281
           C          +GC+G     S E+     GL +E+ YPY+  +    +C ++ S  V  
Sbjct: 190 CVVWEGEKTCNAGCNGGLMWSSFEHIIKTGGLVTEESYPYEAVDN---RCRFNVSNAVVK 246

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
            +   F+  N  E M   L   GP+++ +N+D +  Y    +  N   C P +L H VL+
Sbjct: 247 ISNWTFVSSNEDE-MAAWLANNGPIAIAINADYLQYYRKGIL--NPSRCDPEELNHGVLI 303

Query: 342 VGYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VGYG++         YW+V+NSW     ++G+ ++ RG   CG+  +   A I
Sbjct: 304 VGYGEEKAANGKVEKYWIVKNSWSASWGEKGYVRVLRGKGVCGLNAVPSSALI 356


>gi|410914437|ref|XP_003970694.1| PREDICTED: cathepsin O-like [Takifugu rubripes]
          Length = 328

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 151/329 (45%), Gaps = 57/329 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPEE 115
           F+ F  + GR Y  +    +R  +F Q+   +H             +YG ++FSD S  E
Sbjct: 32  FEWFRERFGRNYEVNSPQFDRRLFFFQESTTRHAYLNSFSAASQSAKYGINQFSDLSQRE 91

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                     +  Y R  ADR          +K   +P  +DWR   +  P  +Q ACGS
Sbjct: 92  F---------QDLYLRASADRAPA----FSGQKAEGLPAKFDWRDHAIVAPVQNQQACGS 138

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAFS+ G                        ++  +AI   +LVE S  Q+++C+ Q  
Sbjct: 139 CWAFSVVGA-----------------------VQSVHAIGGSQLVELSVQQVLDCSFQNK 175

Query: 236 GCDGCFFEPSIEYTHQA--GLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFN 291
           GC+G     ++++  Q    L  + +YPYK        F  ++    VK FT  DF    
Sbjct: 176 GCNGGTPVAALKWLTQTRVKLVPQSEYPYKAQTRMCHFFSGSHGGVGVKNFTALDFS--G 233

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             E M   L K+GPLSV++++    DY G  I+ +   CS     HAVL+VGY    +IP
Sbjct: 234 QEEAMMGHLVKHGPLSVVVDALSWQDYLGGIIQYH---CSSKRSNHAVLVVGYDTTGDIP 290

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YW+V+NSWG    D+G+  ++ G+N CGI
Sbjct: 291 YWIVQNSWGTTWGDKGYVYMKVGSNICGI 319


>gi|393660044|gb|AFN09033.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 51/360 (14%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 95
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 96  -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+ N      +Q  CG+CWAF+  G                        LE Q+A
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGS-----------------------LESQFA 150

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKC 272
           IK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYPY+  N     C
Sbjct: 151 IKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NC 207

Query: 273 AYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             + +K  L   KD   +     E +K +L   GP+ + +++  I +Y    I+     C
Sbjct: 208 RMNSNKF-LVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YC 262

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
               L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 263 FNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 159/361 (44%), Gaps = 80/361 (22%)

Query: 60  DNE-----NILETFKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTS 106
           DNE     N    F +F  K  + YA  EE   RF  FK +    K H+       +G +
Sbjct: 35  DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGIT 94

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAWDWRK 160
           +FSD +  E             + R     +K  ++    +K  P+      P+ +DWR+
Sbjct: 95  KFSDLTASE-------------FRRQFLGLKKRLRLPAHAQK-APILPTTNLPEDFDWRE 140

Query: 161 KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
           K    P  DQ +CGSCWAFS                         G LEG + + TGKLV
Sbjct: 141 KGAVTPVKDQGSCGSCWAFSTT-----------------------GALEGAHYLATGKLV 177

Query: 221 EFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 270
             S+ QLV+C   C         SGC+G     + EY  ++ G+  EKDY Y   +G   
Sbjct: 178 SLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRDGS-- 235

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDET 329
            C +DKSKV        +     + +   L K GPL+V +N+  +  Y +G         
Sbjct: 236 -CKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSC---PYV 291

Query: 330 CSPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
           C+   L H VLLVG+GK           PYW+++NSWG    ++G++KI RG N CG++ 
Sbjct: 292 CAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDS 351

Query: 383 I 383
           +
Sbjct: 352 M 352


>gi|393717160|gb|AFN21082.1| V-Cath [Bombyx mori NPV]
 gi|393717442|gb|AFN21362.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 164/350 (46%), Gaps = 51/350 (14%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYG 104
           A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +             +Y 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYE 71

Query: 105 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
            ++FSD S +E + K TG     +T        +   K+++  +  G  P  +DWR+ N 
Sbjct: 72  INKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGPLEFDWRRLNK 123

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                +Q  CG+CWAF+  G                        LE Q+AIK  +L+  S
Sbjct: 124 VTSVKNQGMCGACWAFATLGS-----------------------LESQFAIKHNELINLS 160

Query: 224 KSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + Q+++C    +GC+G     + E      G++ E DYPY+  N     C  + +K  L 
Sbjct: 161 EQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LV 216

Query: 283 TGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
             KD   +     E +K +L   GP+ + +++  I +Y    I+     C    L HAVL
Sbjct: 217 QVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVL 272

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           LVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 273 LVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|402585860|gb|EJW79799.1| cysteine protease 6 [Wuchereria bancrofti]
          Length = 242

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 122/240 (50%), Gaps = 29/240 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P+ +DW  K V  P  +Q +CGSCWAFS+ G                        +E  
Sbjct: 29  LPNKFDWNTKGVVTPVKNQGSCGSCWAFSVTGN-----------------------IESL 65

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKF 270
           +AIKTG L+  S+ +L++C    +GC+G        E     GLE E  YPYK  NG   
Sbjct: 66  WAIKTGNLISLSEQELIDCDVIDNGCNGGLPINAFREIKRMGGLEPEDQYPYKAKNG--- 122

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
            C   ++++ + T  D +    +ET MK  + + GPLSV ++++L+  Y    +  +   
Sbjct: 123 TCHLVRAQIAV-TIDDAIEIPRNETVMKAWIAQRGPLSVGIDAELLAYYKSGILHPSKSR 181

Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           C P  + H VL+ GYG ++ +PYW ++NSWG    + G+F++ RG + CG+  +   A I
Sbjct: 182 CPPSKINHGVLITGYGIENGLPYWTIKNSWGEEWGENGYFRLMRGKDICGVSDLVSSAII 241


>gi|162460343|ref|NP_001105479.1| cysteine protease2 precursor [Zea mays]
 gi|1491774|emb|CAA68192.1| cysteine protease [Zea mays]
          Length = 360

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 47/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD------GHKK--HERYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E+ +RF  F +        ++K    R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAVA-------LPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC 237
           S  G                        LE  Y   TGK +  S+ QLV+C  A    GC
Sbjct: 171 STTGA-----------------------LEAAYTQATGKPISLSEQQLVDCGLAFNNFGC 207

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANG-EKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           +G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +     + 
Sbjct: 208 NGGLPSQAFEYIKYNGGLDTEESYPYQGVNGISKFK--NENVGVKVLDSVN-ITLGAEDE 264

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE-TCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D +PYWL
Sbjct: 265 LKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWL 324

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 325 IKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|1706261|sp|Q10717.1|CYSP2_MAIZE RecName: Full=Cysteine proteinase 2; Flags: Precursor
 gi|644490|dbj|BAA08245.1| cysteine proteinase [Zea mays]
          Length = 360

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 146/335 (43%), Gaps = 47/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAV-------ALPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC 237
           S  G                        LE  Y   TGK +  S+ QLV+C  A    GC
Sbjct: 171 STTGA-----------------------LEAAYTQATGKPISLSEQQLVDCGFAFNNFGC 207

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET 295
           +G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +     + 
Sbjct: 208 NGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDE 264

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D +PYWL
Sbjct: 265 LKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWL 324

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 325 IKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|312306194|gb|ADQ73946.1| cathepsin L [Paralithodes camtschaticus]
          Length = 324

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 151/346 (43%), Gaps = 61/346 (17%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------FSDRS 112
             +F  F V+ GRQYA  +E + R   + Q+       +E+Y   E         F D +
Sbjct: 19  FTSFHQFKVQYGRQYATAQEERYRSSVYDQNMEFIEAHNEQYTNGEVTYMLAINQFGDMT 78

Query: 113 PEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            EEI  +       SE     ++  R            D  +P   DWR K    P  DQ
Sbjct: 79  NEEINAVMNGLLPASESRGVAVLGGR------------DDTLPAEVDWRTKGAVTPVKDQ 126

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            ACGSCWAFS  G                        LEGQ+ +K GKLV  S+  LV+C
Sbjct: 127 KACGSCWAFSATGS-----------------------LEGQHFLKDGKLVSLSEQNLVDC 163

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKD 286
           + +    GC G   + +  Y     G+++E  YPY+  +G   KC Y+ +      TG  
Sbjct: 164 STKQGDHGCGGGLMDFAFTYIKDNGGIDTEASYPYEATDG---KCQYNPANSGATVTGYV 220

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
            +  +  + ++K +   GP+SV +++     H Y+       D+ CS   L H VL VGY
Sbjct: 221 DVEHDSEDALQKAVATIGPISVAIDASRSTFHFYHKGVYY--DKECSSTSLDHGVLAVGY 278

Query: 345 GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           G QD   YWLV+NSW     + GF ++ R  NN CGI   A Y  +
Sbjct: 279 GTQDGTDYWLVKNSWNITWGNHGFIEMSRNRNNNCGIATQASYPLV 324


>gi|242044818|ref|XP_002460280.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
 gi|241923657|gb|EER96801.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
          Length = 363

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 164/363 (45%), Gaps = 50/363 (13%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---- 95
           +TD+  + +++  + G+L    + +   F  F V+ G+ Y +  E+++RF  F +     
Sbjct: 37  VTDRAASALES-TVFGALGRTRDAL--RFARFAVRYGKSYESAAEVQKRFRIFSESLQLV 93

Query: 96  --GHKK--HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
              ++K    R G + FSD S EE   +     + +     +A   ++    +       
Sbjct: 94  RSTNRKGLSYRLGINRFSDMSWEEF--RATRLGAAQNCSATLAGNHRMRAAAV------A 145

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P   DWR+  +  P  +Q  CGSCW FS  G                        LE  
Sbjct: 146 LPKTKDWREDGIVSPVKNQGHCGSCWTFSTTG-----------------------ALEAA 182

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
           Y   TGK +  S+ QLV+C K  +  GC+G     + EY  +  GL++E+ YPYK  NG 
Sbjct: 183 YTQATGKPISLSEQQLVDCGKPFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVNGI 242

Query: 269 -KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKN 326
             FK   +   VK+    + +     + +K  +    P+SV     +    Y       +
Sbjct: 243 CDFKA--ENVGVKVLDSVN-ITLGAEDELKDAVALVRPVSVAFQVVNGFRQYKSGVYTSD 299

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
               +P D+ HAVL VGYG ++ +PYWL++NSWG    D+G+FK+E G N CG+   A Y
Sbjct: 300 SCGNTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGVATCASY 359

Query: 387 ATI 389
             +
Sbjct: 360 PIV 362


>gi|343473370|emb|CCD14732.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 51/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPEAVDWRKKGAVTPVKDQGAC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTT 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H 
Sbjct: 185 DYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHI 241

Query: 291 N---GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           N       + + L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 242 NLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYNDT 297

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 298 SKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 340


>gi|37651368|ref|NP_932731.1| cathepsin [Choristoneura fumiferana DEF MNPV]
 gi|82024252|sp|Q6VTL7.1|CATV_NPVCD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|37499277|gb|AAQ91676.1| cathepsin [Choristoneura fumiferana DEF MNPV]
          Length = 324

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 161/327 (49%), Gaps = 51/327 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F+ F+    + Y++  E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 177
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AF+  G                        LE Q+AIK  +L+  S+ QL++C     GC
Sbjct: 139 AFATLGS-----------------------LESQFAIKHDQLINLSEQQLIDCDFVDMGC 175

Query: 238 DGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSET 295
           DG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     E 
Sbjct: 176 DGGLLHTAYEAVMNMGGIQAENDYPYEANNGD---CRLNAAKFVVKVKKCYRYVLMFEEK 232

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +K +L   GPL V +++  I +Y    IR     C+ + L HAVLLVGY  ++ +P+W++
Sbjct: 233 LKDLLRIVGPLPVAIDASDIVNYKRGVIR----YCANHGLNHAVLLVGYAVENGVPFWIL 288

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQ 382
           +N+WG    ++G+F++++  NACGI+ 
Sbjct: 289 KNTWGTDWGEQGYFRVQQNINACGIQN 315


>gi|158524604|gb|ABW71226.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 150/336 (44%), Gaps = 49/336 (14%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILC 118
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFVRFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                W E   +R+ A +         V+  +  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNVKLTNAVLPETKDWREDGIVSPVKNQGKCGSCW 168

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y+   GK +  S+ QLV+CA   +  
Sbjct: 169 TFSTTGA-----------------------LEAAYSQAFGKGISLSEQQLVDCAGAFNNF 205

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +     +
Sbjct: 206 GCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAED 263

Query: 295 TMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
            +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +PYW
Sbjct: 264 ELKYAVALVRPVSIAFEVIKGFKQYKSGVYSSTECGNTPMDVNHAVLAVGYGVENGVPYW 323

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           L++NSWG    D+G+FK+E G N CGI   A Y  +
Sbjct: 324 LIKNSWGADWGDDGYFKMEMGKNMCGIATCASYPVV 359


>gi|258618831|gb|ACV84238.1| cysteine proteinase L [Anisakis simplex]
          Length = 411

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 151/331 (45%), Gaps = 44/331 (13%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEI 116
           ++ F  F+   GR+Y    E +ERF+ F        K    K++ ++G + F+D S EE+
Sbjct: 101 IDQFIDFMNVYGRKYHGYHETRERFQNFVNNMKYIKKIQQGKQNVQFGITRFADWSEEEM 160

Query: 117 LCKTGFKWSERTYERIVADRE----KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
              T     E     +  DRE      E      +  G  P+++DWR KNV     DQ  
Sbjct: 161 KSMT---CGEEPNMEMRYDREYYDGSYEDEFTLYDGFGGRPESFDWRSKNVVTDIKDQQR 217

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAF   G                       ++E   AI    LV  S+ QLV+C  
Sbjct: 218 CGSCWAFGAVG-----------------------VVESMNAIAKNPLVSLSEQQLVDCDM 254

Query: 233 QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
             +GCDG +   +++Y    G+  E+ YPY     +  K      +V + T K ++  N 
Sbjct: 255 NDNGCDGGYRPYALQYIRHNGIVPEELYPYAGKELDSCKLNTTVQRVYVKTVK-YIRRNE 313

Query: 293 SETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDN 349
           S     + YK GPLSV +N   DL H Y       + E C     G HA+ +VGYG Q+ 
Sbjct: 314 SAMADFVFYK-GPLSVGINVTKDLFH-YQSGVFTPSKEDCEQNPQGTHALAVVGYGSQNG 371

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
             YW+++NSWG     +GFF  +RG N+CGI
Sbjct: 372 EDYWIIKNSWGKRWGMDGFFLYKRGANSCGI 402


>gi|198427474|ref|XP_002119872.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 596

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 143/312 (45%), Gaps = 59/312 (18%)

Query: 68  FKAFIVKRGRQYAND-EEIKERFEYFKQDGH-----KKHER----YGTSEFSDRSPEEIL 117
           F  F+ K  R Y++  +E  ERFE FK +        + ER    YG ++F D S EE  
Sbjct: 169 FDMFLEKYPRTYSSSSDEYNERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEE-- 226

Query: 118 CKTGFKWSERTYERIVA---DREKVE-KMLMEVEKDGP-VPDAWDWRKKNVTGPAGDQAA 172
                      Y R +A    R  V  + L   E D   +PD+ DWRK        +Q +
Sbjct: 227 -----------YHRTLAPGFTRPLVPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGS 275

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ+ +K  KL+  S+ +LV+C  
Sbjct: 276 CGSCWAFSTTGN-----------------------VEGQWFLKHKKLISLSEQELVDCDT 312

Query: 233 QCSGCDGCFFEPSIEYTH---QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
             SGC G    PS  Y       GLE EKDYPY    GE  KCA  +S  K+F       
Sbjct: 313 LDSGCGGGL--PSNAYKSIEKLGGLEPEKDYPYV---GEGEKCAIKQSDFKVFVNNSVAL 367

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
                 +   L + GP+S+ +N++L+  Y G         C+P  L H VL+VGYG ++ 
Sbjct: 368 PKDEVKLAAWLAQNGPISIGINANLMQFYWGGISHPWKIFCNPKSLDHGVLIVGYGTENG 427

Query: 350 IPYWLVRNSWGP 361
            P+W+++NSWGP
Sbjct: 428 TPFWIIKNSWGP 439



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 25/105 (23%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD+ DWRK        +Q +CGSCWAFS  G                        +EGQ
Sbjct: 475 IPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGN-----------------------VEGQ 511

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLES 256
           + +K  KL+  S+ +LV+C    SGC G    PS  Y     LE+
Sbjct: 512 WFLKHKKLISLSEQELVDCDTLDSGCGGGL--PSNAYKSIEKLEN 554



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 16/44 (36%), Positives = 32/44 (72%)

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           ++  P+W+++NSWGP   +EG+++I RG+ +CG+  +A  + +D
Sbjct: 553 ENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATSSIVD 596


>gi|340370388|ref|XP_003383728.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 398

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 118/242 (48%), Gaps = 29/242 (11%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD  DWR+K    P  DQ  CGSCWAFS  G                        LEGQ
Sbjct: 183 APDTVDWREKGAVTPIKDQGQCGSCWAFSAIGS-----------------------LEGQ 219

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKF 270
           + I TG LV  S+ QLV+C+ +  GC+G     + +Y    AG ESE DYPY   NG   
Sbjct: 220 HFINTGNLVSLSEQQLVDCSLKNDGCNGGMLSTAFKYIESVAGEESETDYPYTAKNG--- 276

Query: 271 KCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
            C YD SK V   TG   L     +++   +   GP+SV +++        +     +++
Sbjct: 277 TCQYDPSKAVAKVTGYTALPSGDEDSLNDAVTSKGPISVCIDASHKSFQLYSEGVYYEKS 336

Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 388
           CS + L H VL+VGYG +D   YWLV+NSWG     +G+ ++ R   N CGI   A Y  
Sbjct: 337 CSYFLLDHCVLVVGYGTEDTADYWLVKNSWGTSWGMKGYIRMSRNRKNNCGIATNAAYPL 396

Query: 389 ID 390
           ++
Sbjct: 397 VN 398



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 35/82 (42%), Gaps = 24/82 (29%)

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
           G VP++ DWRKK    P   Q  CG  W + I G                        +E
Sbjct: 109 GNVPNSIDWRKKGAVTPVSSQGQCG-VWPWPIVGS-----------------------VE 144

Query: 210 GQYAIKTGKLVEFSKSQLVECA 231
            QY IKTG LV  S  Q+++CA
Sbjct: 145 SQYFIKTGTLVPLSVQQILDCA 166


>gi|66730453|ref|NP_001019413.1| cathepsin W precursor [Rattus norvegicus]
 gi|62531092|gb|AAH93401.1| Cathepsin W [Rattus norvegicus]
 gi|149062072|gb|EDM12495.1| cathepsin W [Rattus norvegicus]
          Length = 371

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 169/355 (47%), Gaps = 63/355 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y+N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIQFNRSYSNPAEYTRRLGIFAHNLAQAQRLQEEDLGTAEFGQTPFSDLTEEEF 97

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRK-KNVTGPAGDQAACG 174
               G    +R  ERI+   +KV+      E+ G  VP   DWRK KN+     +Q  C 
Sbjct: 98  GQLYGH---QRAPERILNMAKKVKS-----ERWGESVPPTCDWRKVKNIISSIKNQGNCR 149

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
            CWA + A                         ++  + IKT + V+ S  +L++C +  
Sbjct: 150 CCWAIAAADN-----------------------IQTLWRIKTQQFVDVSVQELLDCDRCG 186

Query: 235 SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           +GC+G F ++  I   + +GL SE+DYP++  + +  +C  DK + K+   +DF   + +
Sbjct: 187 NGCNGGFVWDAYITVLNNSGLASEEDYPFQ-GHQKPHRCLADKYR-KVAWIQDFTMLSSN 244

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD---- 348
           E  +   L  +GP++V +N  L+  Y    I+    TC P+ + H+VLLVG+GK+     
Sbjct: 245 EQVIAGYLAIHGPITVTINMKLLQYYQKGVIKATPSTCDPHLVNHSVLLVGFGKEKGGMQ 304

Query: 349 -------------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                        + PYW+++NSWG    ++G+F++ RGNN CGI +    A +D
Sbjct: 305 TGTLLSHSRKPRRSTPYWILKNSWGAEWGEKGYFRLYRGNNTCGIAKYPITARVD 359


>gi|9630927|ref|NP_047524.1| Cystein Protease [Bombyx mori NPV]
 gi|1168798|sp|P41721.1|CATV_NPVBM RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|540066|gb|AAB49542.1| cysteine protease [Bombyx mori NPV]
 gi|3745946|gb|AAC63793.1| Cystein Protease [Bombyx mori NPV]
          Length = 323

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 51/360 (14%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 95
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 96  -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+ N      +Q  CG+CWAF+  G                        LE Q+A
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGS-----------------------LESQFA 150

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKC 272
           IK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYPY+  N     C
Sbjct: 151 IKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NC 207

Query: 273 AYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             + +K  L   KD   +     E +K +L   GP+ + +++  I +Y    I+     C
Sbjct: 208 RMNSNKF-LVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGIIK----YC 262

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
               L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 263 FDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|237643659|ref|YP_002884349.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
 gi|229358205|gb|ACQ57300.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus]
          Length = 323

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 169/360 (46%), Gaps = 51/360 (14%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 95
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 96  -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVIILDQPPGKGP 113

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+ N      +Q  CG+CWAF+  G                        LE Q+A
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGS-----------------------LESQFA 150

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKC 272
           IK  +L+  S+ Q+++C    +GC+G     + E      G++ E DYPY+  N     C
Sbjct: 151 IKHNELINLSEQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NC 207

Query: 273 AYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             + +K  L   KD   +     E +K +L   GP+ + +++  I +Y    I+     C
Sbjct: 208 RMNSNKF-LVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YC 262

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
               L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 263 FNSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|393717301|gb|AFN21222.1| V-Cath [Bombyx mori NPV]
          Length = 323

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 164/350 (46%), Gaps = 51/350 (14%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYG 104
           A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +             +Y 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYE 71

Query: 105 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
            ++FSD S +E + K TG     +T        +   K+++  +  G  P  +DWR+ N 
Sbjct: 72  INKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGPLEFDWRRLNK 123

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                +Q  CG+CWAF+  G                        LE Q+AIK  +L+  S
Sbjct: 124 VTSVKNQGMCGACWAFATLGS-----------------------LESQFAIKHNELINLS 160

Query: 224 KSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + Q+++C    +GC+G     + E      G++ E DYPY+  N     C  + +K  L 
Sbjct: 161 EQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LV 216

Query: 283 TGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
             KD   +     E +K +L   GP+ + +++  I +Y    I+     C    L HAVL
Sbjct: 217 QVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVL 272

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           LVGYG ++N+PYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 273 LVGYGVENNVPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|444724527|gb|ELW65130.1| Cathepsin W [Tupaia chinensis]
          Length = 491

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 59/350 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E F  F ++  R Y++  E   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 166 EVFALFQIQYNRSYSSPAEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTDEEF 225

Query: 117 LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
                     + Y+  ++  +  ++ + +  +++  PVP   DWRK  +  P  +Q  C 
Sbjct: 226 ---------SQVYKQPKVPGEVPRMVRKVRSLKQGKPVPPTCDWRKARIISPIRNQKNCS 276

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
            CWA + A                         +E Q+ I+  + V+ S  +L++C +  
Sbjct: 277 CCWAMAAADN-----------------------IEAQWGIRYNQSVKVSVQELLDCGRCG 313

Query: 235 SGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
            GC G + ++  I   + +GL SEKDYPY+ +N +  +C   ++KV     +DF+    +
Sbjct: 314 DGCKGGWVWDAFITVLNNSGLASEKDYPYQ-SNVDPQRCRVKRNKVAWI--QDFIMLQDN 370

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI-- 350
           E  + + L  +GP++V +N   +  Y          TC P+ + H+VLLVG+G   ++  
Sbjct: 371 EQIIAQYLASHGPITVTINMKPLKQYRKGVFEATPATCDPWLVDHSVLLVGFGSSKSVKG 430

Query: 351 ---------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                    PYW+++NSWG    ++G+F++ RG+N CGI +    A +++
Sbjct: 431 MRAGTASSKPYWILKNSWGAKWGEKGYFRLHRGSNTCGIAKYPLTARVEL 480


>gi|426248750|ref|XP_004018122.1| PREDICTED: pro-cathepsin H [Ovis aries]
          Length = 355

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 160/337 (47%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDRSPEEILCK 119
           F++++V+  ++Y++ EE   R + F  +         + H  + G ++FSD S  E+  K
Sbjct: 55  FQSWMVQHQKKYSS-EEYHHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFAEL--K 111

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWR+K N   P  +Q +CGSCW 
Sbjct: 112 RKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWREKGNFVTPVKNQGSCGSCWT 163

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGKL   ++ QLV+CA+  +  G
Sbjct: 164 FSTTGA-----------------------LESAVAIATGKLPFLAEQQLVDCAQNFNNHG 200

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPY+  +G+   C Y  SK   F  KD   +  N  
Sbjct: 201 CQGGLPSQAFEYIRYNKGIMGEDTYPYRGEDGD---CKYQPSKAIAFV-KDVANITLNDE 256

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    + +D +    G     +  +C  +P  + HAVL VGYG++  
Sbjct: 257 EAMVEAVALYNPVSFAFEVTADFMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEEKG 313

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP    +G+F IERG N CG+   A +
Sbjct: 314 IPYWIVKNSWGPHWGMKGYFLIERGKNMCGLAACASF 350


>gi|945081|gb|AAC49361.1| P21 [Petunia x hybrida]
          Length = 358

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 145/337 (43%), Gaps = 51/337 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILC 118
           +F  F  + G++Y + EEIK+RF+ F          +      + G +EFSD        
Sbjct: 58  SFARFARRYGKRYDSVEEIKQRFDIFLDNLEMINSHNDKGLSYKLGVNEFSD-------- 109

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                W E   +R+ A +         ++ +D  +P+  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWDEFRRDRLGAAQNCSATTKGNLKLRDAVLPETKDWREAGIVSPVKNQGKCGSCW 166

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y  K GK +  S+ QLV+CA   +  
Sbjct: 167 TFSTTG-----------------------ALEAAYTQKFGKGISLSEQQLVDCAGAFNNF 203

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGS 293
           GC+G     + EY     GLE+E+ YPY   NG    C +    V +  T    +     
Sbjct: 204 GCNGGLPSQAFEYIKSNGGLETEEAYPYTGKNG---LCKFSSQNVGVKVTDSVNITLGAE 260

Query: 294 ETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           + +K  +    P+SV          Y        +   +P D+ HAVL VGYG +  +P+
Sbjct: 261 DELKYAVALVRPVSVAFEVVKGFKQYKSGVYTSTECGTTPMDVNHAVLAVGYGVEYGVPF 320

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           WL++NSWG    D  +FK+E GN+ CGI   A Y  +
Sbjct: 321 WLIKNSWGADWGDNAYFKMEMGNDMCGIATCASYPVV 357


>gi|13928758|ref|NP_113748.1| cathepsin K precursor [Rattus norvegicus]
 gi|12585195|sp|O35186.1|CATK_RAT RecName: Full=Cathepsin K; Flags: Precursor
 gi|2305208|gb|AAB65743.1| cathepsin K [Rattus norvegicus]
 gi|50927597|gb|AAH78793.1| Cathepsin K [Rattus norvegicus]
 gi|149030667|gb|EDL85704.1| cathepsin K, isoform CRA_a [Rattus norvegicus]
          Length = 329

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG         R+   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RVPPSRSFSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS AG                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSAG-----------------------ALEGQLKKKTGKLLALSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+V
Sbjct: 222 RGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    YW+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFPKM 329


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 156/347 (44%), Gaps = 51/347 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 110
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +EGQ+  KT +LV  S+ QL++C
Sbjct: 169 GQCGSCWAFSSTGA-----------------------IEGQHYRKTNRLVNLSEQQLIDC 205

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGK 285
           +K    +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG 
Sbjct: 206 SKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGY 265

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVG 343
             +H      +   +   GP+SV +N+ L           +D  C+    DL H VLLVG
Sbjct: 266 INIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVG 325

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           YG +D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 326 YGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|343476707|emb|CCD12272.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 151/343 (44%), Gaps = 50/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVS-TGKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +    L   S+  LV C  +
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVTGHNLTSLSEQMLVSCDTE 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G   + + ++   +++  + +E+ YPY +  G    C     KV     +D +  
Sbjct: 185 DLGCAGGLMDNAFKWIVSSNRHNVFTEESYPYASKGGNVPPCRMS-GKVVGAKIRDHVDL 243

Query: 291 NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
              E  + + L K GP+++ ++S     Y G  +     +C    L H VLLVGY     
Sbjct: 244 PKDENAIAEWLAKNGPVAIAVDSTSFQSYTGGVL----TSCISKQLDHGVLLVGYDDTSK 299

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 392
            PYW+++NSW     +EG+ +IE+G N C ++    YAT  VV
Sbjct: 300 PPYWIIKNSWSKGWGEEGYIRIEKGTNQCLVKN---YATSAVV 339


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 155/347 (44%), Gaps = 51/347 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 110
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +EGQ+  KT +LV  S+ QL++C
Sbjct: 169 GQCGSCWAFSSTGA-----------------------IEGQHYRKTNRLVNLSEQQLIDC 205

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGK 285
           +K    +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG 
Sbjct: 206 SKSYGNNGCEGGLMDLAFQYVRDNKGIDSEISYPYISGDGDENVRCLFNSTNIMAQVTGY 265

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
             +H      +   +   GP+SV +N+ L     Y        +   +  DL H VLLVG
Sbjct: 266 INIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPECASASEDLDHGVLLVG 325

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           YG +D  PYWL++NSWG    D+G+ KI +   N CG+   A Y  +
Sbjct: 326 YGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAASYPLV 372


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 159/348 (45%), Gaps = 62/348 (17%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSDR 111
            L  ++ F  + G+QY + +E   R   ++Q+    +  +E+Y           ++F D 
Sbjct: 18  TLNEWQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDM 77

Query: 112 SPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           + EEI     GF          ++  +KV +  M       +PD  DWR K    P  DQ
Sbjct: 78  TTEEINAAMNGF----------LSAGKKVPRGTMYQPLVDELPDTVDWRDKGAVTPVKDQ 127

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            ACGSCWAFS  G                        LEGQ+ + TGKLV  S+  LV+C
Sbjct: 128 KACGSCWAFSATGS-----------------------LEGQHFLSTGKLVSLSEQNLVDC 164

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
           + +    GC G   + +  Y     G+++E+ YPY+  NG    C ++   V   L +  
Sbjct: 165 SDKYGNFGCGGGLMDNAFRYIKDNNGIDTEESYPYEAKNG---PCRFNSDNVGATLSSYV 221

Query: 286 DFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           D  H  GSE  ++K + + GP+SV ++  +   H Y+       DE CS   L H VL V
Sbjct: 222 DIQH--GSEDDLQKAVAEKGPVSVAIDASTSTFHFYSRGIYY--DEKCSSSFLDHGVLAV 277

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG  D+  YWLV+NSW     D G+ K+ R  NN CGI   A Y  +
Sbjct: 278 GYGTDDSSDYWLVKNSWNETWGDSGYIKMSRNRNNNCGIASQASYPVV 325


>gi|15824704|gb|AAL09448.1| cysteine protease [Leishmania donovani]
          Length = 353

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 155/363 (42%), Gaps = 54/363 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 96  GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
                 DWR+K V  P  +Q  CGSCWAF+  G                        +EG
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGN-----------------------IEG 163

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANG 267
           Q+A+K   LV  S+  LV C     GC+G   E ++++    H   + +E  YPY +A G
Sbjct: 164 QWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGG 223

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
            +  C +D   V           +  E +   + K GP++V +++     Y G  +    
Sbjct: 224 TRPPC-HDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV---- 278

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
             C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  A
Sbjct: 279 TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTA 338

Query: 388 TID 390
           TID
Sbjct: 339 TID 341


>gi|6649577|gb|AAF21462.1|U69121_1 cysteine proteinase PWCP2 [Paragonimus westermani]
          Length = 260

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 143/296 (48%), Gaps = 50/296 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E ++ F    G+ YAN+++ K RF  FK +  +  +         RYG ++FSD +PEE 
Sbjct: 4   ELYEQFKRXYGKVYANEDDQK-RFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPEEF 62

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K         Y     + ++V+++     K    P+  DWR K       +Q +CGSC
Sbjct: 63  AAK---------YLSAPVNNDQVKRVRPTGLK--AAPERIDWRAKGAVTAVENQGSCGSC 111

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS AG                        +EGQ+ IKTG+LV  SK QLV+C +   G
Sbjct: 112 WAFSTAGN-----------------------VEGQWFIKTGQLVSLSKQQLVDCDRAADG 148

Query: 237 CDGCFFEPS-IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G +   S +E  H  GLES+ DYPY    G K +C  +K ++ L    D +    SE 
Sbjct: 149 CNGGWPASSYLEIMHMGGLESQDDYPYA---GVKEQCFMEKERL-LAKIDDSIALXPSED 204

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
                L ++GPLS LLN+  +  Y    I  +   CSP DL HAVL VGY K+ ++
Sbjct: 205 DNAAYLAEHGPLSTLLNAITLQYYQSGIIHPSYXXCSPVDLNHAVLTVGYDKEGDM 260


>gi|343474734|emb|CCD13687.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 524

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 51/337 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 114 QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 173

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +     +  A   K  + ++ V   G  P A DWRKK    P  DQ +C
Sbjct: 174 EE------FRATYLNGAKYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGSC 226

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAF+  G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 227 GSCWAFAAIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTT 263

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C G F + + ++   +++  + +E+ YPY + +G    C  +KS  K+   K   H 
Sbjct: 264 EDNCGGGFADRAFKWIVSSNKGNVFTERSYPYASIDGYVPPC--NKSG-KVVGAKISGHI 320

Query: 291 NGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           N  +    I   L + GP+++ +++    DY G  +     +CS   + H VLLVGY   
Sbjct: 321 NLPKDENAIAEWLARNGPVAIAVDASTFLDYKGGVL----TSCSSKHVNHEVLLVGYNDT 376

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
              PYW+++NSW     +EG+ +IE+G N C +++ A
Sbjct: 377 SKPPYWIIKNSWDKEWGEEGYIRIEKGTNLCLMKEYA 413


>gi|255550445|ref|XP_002516273.1| cysteine protease, putative [Ricinus communis]
 gi|223544759|gb|EEF46275.1| cysteine protease, putative [Ricinus communis]
          Length = 358

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 149/338 (44%), Gaps = 53/338 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTS------EFSDRSPEEILC 118
           +F  F+ + G++Y +++E+K RF  F +  D  +   R G S      +F+D        
Sbjct: 58  SFSRFVYRHGKRYQSEDEMKMRFAIFSENLDFIRSTNRKGLSYTLAVNDFAD-------- 109

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQAACGSCW 177
                W E    R+ A +          +  G  +PD  DWR+  +  P  +Q  CGSCW
Sbjct: 110 ---LTWQEFQKHRLGAAQNCSATTKGNHKLTGVALPDTKDWREVGIVSPVKNQGHCGSCW 166

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  Y    GK +  S+ QLV+CA   +  
Sbjct: 167 TFSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAFNNF 203

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGS 293
           GC G     + EY  +  GLE+E+ YPY    GE   C +    V +       +     
Sbjct: 204 GCHGGLPSQAFEYIKYNGGLETEEAYPY---TGEDGACKFSSENVGIQVLDSVNITLGAE 260

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIP 351
           + +K+ +    P+SV         +  + +  +D TC  +P D+ HAVL VGYG +D +P
Sbjct: 261 DELKEAVGLVRPVSVAFEVVSGFRFYKSGVYTSD-TCGSTPMDVNHAVLAVGYGVEDGVP 319

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWLV+NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 320 YWLVKNSWGENWGDHGYFKMEMGKNMCGVATCASYPVV 357


>gi|218185|dbj|BAA14404.1| oryzain gamma precursor [Oryza sativa Japonica Group]
          Length = 362

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 146/338 (43%), Gaps = 54/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQ--------DGHKKHERYGTSEFSDRSPEEILCK 119
           F  F V+ G++Y +  E++ RF  F +        +      R G + F+D S       
Sbjct: 62  FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMS------- 114

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVE-KDGP-VPDAWDWRKKNVTGPAGDQAACGSCW 177
               W E    R+ A +     +      +D P +P+  DWR+  +  P  DQ  CGSCW
Sbjct: 115 ----WEEFQASRLGAAQNCSATLAGNHRMRDAPALPETKDWREDGIVSPVKDQGHCGSCW 170

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE +Y   TG  V  S+ QL +CA + +  
Sbjct: 171 PFSTTGS-----------------------LEARYTQATGPPVSLSEQQLADCATRYNNF 207

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNG 292
           GC G     + EY  +  GL++E+ YPY   NG    C Y  + + VK+    + +    
Sbjct: 208 GCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG---ICHYKPENAGVKVLDSVN-ITLVA 263

Query: 293 SETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            + +K  +    P+SV     +    Y       +    SP D+ HAVL VGYG ++ +P
Sbjct: 264 EDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVP 323

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWL++NSWG    D G+F +E G N CGI   A Y  +
Sbjct: 324 YWLIKNSWGADWGDNGYFTMEMGKNMCGIATCASYPIV 361


>gi|292397748|ref|YP_003517814.1| cathepsin [Lymantria xylina MNPV]
 gi|291065465|gb|ADD73783.1| cathepsin [Lymantria xylina MNPV]
          Length = 335

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 158/330 (47%), Gaps = 57/330 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSDRSPEEI 116
           F++F+    + Y +D E  +R+  FK + H+ + +           YG ++FSD S  E+
Sbjct: 35  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKFSDLSKSEL 94

Query: 117 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
           + K TG    +R      A       +L +    GP+   +DWR++N      +Q ACG+
Sbjct: 95  IAKFTGLSIPQR------ASNFCKTIVLNQPPDKGPL--HFDWREQNKVTSIKNQGACGA 146

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAF+                           +E Q+A++  +LV+ S+ QL++C     
Sbjct: 147 CWAFATLAS-----------------------VESQFAMRHNRLVDLSEQQLIDCDSVDM 183

Query: 236 GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFN 291
           GC+G     + E      G+++E DYP+    G   +C  D+ +   V L     ++  N
Sbjct: 184 GCNGGLLHTAFEEIIRMGGVQAELDYPFV---GRDRRCGVDRHRPYVVSLVGCYRYVMVN 240

Query: 292 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
             E +K +L   GP+ + +++ D+++ Y G        +C    L HAVLLVGYG ++ +
Sbjct: 241 -EEKLKDLLRAVGPIPMAIDAADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGV 294

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           PYW  +N+WG    + G+F++ +  NACG+
Sbjct: 295 PYWAFKNTWGDDWGENGYFRVRQNINACGM 324


>gi|398014254|ref|XP_003860318.1| cysteine peptidase A (CBA) [Leishmania donovani]
 gi|13518086|gb|AAK27384.1| cysteine proteinase-like protein [Leishmania donovani]
 gi|322498538|emb|CBZ33611.1| cysteine peptidase A (CBA) [Leishmania donovani]
          Length = 354

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 155/363 (42%), Gaps = 54/363 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 96  GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
                 DWR+K V  P  +Q  CGSCWAF+  G                        +EG
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGN-----------------------IEG 164

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANG 267
           Q+A+K   LV  S+  LV C     GC+G   E ++++    H   + +E  YPY +A G
Sbjct: 165 QWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMEQAMQWIINDHNGTVPTEDSYPYTSAGG 224

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
            +  C +D   V           +  E +   + K GP++V +++     Y G  +    
Sbjct: 225 TRPPC-HDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV---- 279

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
             C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  A
Sbjct: 280 TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTA 339

Query: 388 TID 390
           TID
Sbjct: 340 TID 342


>gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis]
 gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis]
          Length = 373

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 152/334 (45%), Gaps = 70/334 (20%)

Query: 79  YANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCKTGFKWSERTYE 130
           YA+ EE   RF+ FK +  +  +H++      +G ++FSD +  E      F+       
Sbjct: 69  YASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSE------FRRQFLGLR 122

Query: 131 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLL 190
           R+   ++  E  ++       +P  +DWR+K       +Q +CGSCW+FS  G       
Sbjct: 123 RLRLPKDANEAPMLPTND---LPADFDWREKGAVTAVKNQGSCGSCWSFSTTGA------ 173

Query: 191 QYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCF 241
                            LEG   + TGKLV  S+ QLV+C  +C         SGC+G  
Sbjct: 174 -----------------LEGANYLATGKLVSLSEQQLVDCDHECDPAEEGACDSGCNGGL 216

Query: 242 FEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 300
              + EYT +AG L  E+DYPY     ++  C +DK+K+        +     + +   L
Sbjct: 217 MNSAFEYTLKAGGLMREEDYPYTGT--DRGACQFDKTKIAAKVANFSVVSLDEDQIAANL 274

Query: 301 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG-------KQDN 349
            K GPL+V +N+  +  Y G           PY     L H VLLVGYG       +   
Sbjct: 275 VKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKE 327

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 328 KPYWIIKNSWGENWGESGYYKICRGRNICGVDSM 361


>gi|55735421|gb|AAV59468.1| cathepsin [Bombyx mori NPV]
          Length = 323

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 163/350 (46%), Gaps = 51/350 (14%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYG 104
           A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +             +Y 
Sbjct: 12  AVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQNDSAKYE 71

Query: 105 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
            ++FSD S +E + K TG     +T        +   K+++  +  G  P  +DWR+ N 
Sbjct: 72  INKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGPLEFDWRRLNK 123

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                +Q  CG+CWAF+                           LE Q+AIK  +L+  S
Sbjct: 124 VTSVKNQGMCGACWAFATLAS-----------------------LESQFAIKHNQLINLS 160

Query: 224 KSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + Q+++C    +GC+G     + E      G++ E DYPY+  N     C  + +K  L 
Sbjct: 161 EQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNNN---CRMNSNKF-LV 216

Query: 283 TGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
             KD   +     E +K +L   GP+ + +++  I +Y    I+     C    L HAVL
Sbjct: 217 QVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFDSGLNHAVL 272

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           LVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 273 LVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|343471318|emb|CCD16236.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 153/339 (45%), Gaps = 55/339 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ   +  E         +G ++FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSP 94

Query: 114 EEILCK--TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
           EE       G K+     ER         + ++ V   G  P A DWRKK    P  DQ 
Sbjct: 95  EEFRATYLNGAKYYAAALER--------PRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQG 145

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
           +CGSCWAF+  G                        +EGQ+ I   +L   S+  LV C 
Sbjct: 146 SCGSCWAFAATGN-----------------------IEGQWKIAGHELTSLSEQMLVSCD 182

Query: 232 KQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                C G F + + ++   +++  + +E+ YPY + +G    C  +KS  K+   K   
Sbjct: 183 TTEDNCRGGFADRAFKWIVSSNKGNVFTEESYPYASTDGYVPPC--NKSG-KVVGAKISG 239

Query: 289 HFN---GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           H N       + + L + GP+++ +++    DY G  +     +CS   L H VLLVGY 
Sbjct: 240 HINLPKDENAIAEWLARNGPVAIAVDASTFLDYKGGVL----TSCSSEGLSHDVLLVGYN 295

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
                PYW+++NSW     +EG+ +IE+G N C +++ A
Sbjct: 296 DTSKPPYWIIKNSWDKEWGEEGYIRIEKGTNLCLMKEYA 334


>gi|9631045|ref|NP_047715.1| cathepsin-like proteinase [Lymantria dispar MNPV]
 gi|13124028|sp|Q9YMP9.1|CATV_NPVLD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3822313|gb|AAC70264.1| cathepsin-like proteinase [Lymantria dispar MNPV]
          Length = 356

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 156/330 (47%), Gaps = 57/330 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTS-----------EFSDRSPEEI 116
           F++F+    + Y +D E  +R+  FK + H+ + + G +           +FSD S  E+
Sbjct: 56  FESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSEL 115

Query: 117 LCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
           + K TG    ER             K ++  +     P  +DWR++N      +Q ACG+
Sbjct: 116 IAKFTGLSIPERV--------SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGA 167

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAF+                           +E Q+A++  +L++ S+ QL++C     
Sbjct: 168 CWAFATLAS-----------------------VESQFAMRHNRLIDLSEQQLIDCDSVDM 204

Query: 236 GCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSK---VKLFTGKDFLHFN 291
           GC+G     + E      G+++E DYP+    G   +C  D+ +   V L     ++  N
Sbjct: 205 GCNGGLLHTAFEEIMRMGGVQTELDYPFV---GRNRRCGLDRHRPYVVSLVGCYRYVMVN 261

Query: 292 GSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
             E +K +L   GP+ + +++ D+++ Y G        +C    L HAVLLVGYG ++ +
Sbjct: 262 -EEKLKDLLRAVGPIPMAIDAADIVNYYRGVI-----SSCENNGLNHAVLLVGYGVENGV 315

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           PYW+ +N+WG    + G+F++ +  NACG+
Sbjct: 316 PYWVFKNTWGDDWGENGYFRVRQNVNACGM 345


>gi|195997891|ref|XP_002108814.1| hypothetical protein TRIADDRAFT_20325 [Trichoplax adhaerens]
 gi|190589590|gb|EDV29612.1| hypothetical protein TRIADDRAFT_20325 [Trichoplax adhaerens]
          Length = 333

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 150/339 (44%), Gaps = 52/339 (15%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEI 116
           ++L  FK+FI    R Y   EE + RF+ FK++  +          YG ++F+D + EE 
Sbjct: 31  DLLARFKSFITDYNRNYTTKEEHEFRFQTFKKNFRRIASTNANGATYGVNKFADWTDEE- 89

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR--KKNVTGPAGDQAACG 174
                FK  E    R V  +E V   L         P + DWR  K+N+ GP  +Q  CG
Sbjct: 90  -----FK--ELLGNRQVPTQEIVNSELHHSLSTAKFPSSLDWREHKRNIVGPVRNQGRCG 142

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
            CWAFS                           +   +A+      E S  QL+ C    
Sbjct: 143 CCWAFSTVE-----------------------TIASAWALAGNSFTELSVQQLLSCDNMD 179

Query: 235 SGCDGCFFEPSIEY--THQAGLESEKDYPYKNANGEKFKCAYDKSK----VKLFTGKDFL 288
            GC G  F  +  +   ++  LE+E   PY    G++ KC    +     +K FT  +F+
Sbjct: 180 GGCRGGSFYLACNWLTKNRVPLETESANPYL---GKRDKCVKHATNTGIILKKFTTSNFI 236

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
            +  S +M   L + GPLS+ +++    DY G  I+ +   C    L HAV +VGY    
Sbjct: 237 -YQESSSMIAALNQNGPLSIAVDATSWRDYVGGIIQHH---CDGKVLNHAVQVVGYKLDA 292

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
            +PYW+VRNSWG    D G+  I+ G N CGI +  G+ 
Sbjct: 293 PVPYWIVRNSWGEDFGDHGYIYIKMGKNVCGIAESVGWV 331


>gi|27819101|gb|AAO23117.1| cysteine proteinase [Bombyx mori NPV]
          Length = 323

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 168/360 (46%), Gaps = 51/360 (14%)

Query: 42  DQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------ 95
           ++++  +   A+  S  +D       F+ F+ +  + Y+++ E   RF+ F+ +      
Sbjct: 2   NKILFYLFVYAVVKSAAYDPLKAPNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIIN 61

Query: 96  -GHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
                  +Y  ++FSD S +E + K TG     +T        +   K+++  +  G  P
Sbjct: 62  KNQNDSAKYEINKFSDLSKDETIAKYTGLSLPTQT--------QNFCKVILLDQPPGKGP 113

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             +DWR+ N      +Q  CG+CWAF+  G                        LE Q+A
Sbjct: 114 LEFDWRRLNKVTSVKNQGMCGACWAFATLGS-----------------------LESQFA 150

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKC 272
           IK  +L+  S+ Q++ C    +GC+G     + E      G++ E DYPY+  N     C
Sbjct: 151 IKHNELINLSEQQMIGCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NC 207

Query: 273 AYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
             + +K  L   KD   +     E +K +L   GP+ + +++  I +Y    I+     C
Sbjct: 208 RMNSNKF-LVQVKDCYRYIIVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YC 262

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
               L HAVLLVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 263 FDSGLNHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|327358519|gb|AEA51106.1| cathepsin F, partial [Oryzias melastigma]
          Length = 255

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 118/238 (49%), Gaps = 27/238 (11%)

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
           D+WDWR      P  +Q  CGSCWAFS+ G                        +EGQ+ 
Sbjct: 44  DSWDWRDHGAVSPVKNQGMCGSCWAFSVTGN-----------------------IEGQWF 80

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKC 272
           +K G L+  S+ +LV+C      C G     + E   +  GLE+E DY Y    G+K +C
Sbjct: 81  LKNGTLLSLSEQELVDCDGLDQACRGGLPSNAYEAIEKLGGLETETDYSY---TGKKQRC 137

Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
            +   KV  +           + +   L + GP+SV LN+  +  Y           C+P
Sbjct: 138 DFTNRKVAAYINSSVELPKDEKEIAAWLAENGPISVALNAFAMQFYKKGVSHPWKIFCNP 197

Query: 333 YDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           + + HAVLLVGYG+++ IP+W ++NSWG    ++G++ + RG+NACGI ++   A ++
Sbjct: 198 WMIDHAVLLVGYGERNGIPFWAIKNSWGEDYGEQGYYYLHRGSNACGINKMGSSAVVN 255


>gi|225706914|gb|ACO09303.1| Cathepsin H precursor [Osmerus mordax]
          Length = 328

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 162/339 (47%), Gaps = 57/339 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEILCK 119
           FK+++++  +QY + EE   R + F        + +G     R G + FSD + +E   +
Sbjct: 30  FKSWMMQHNKQY-DIEEYYHRLQIFIENKMKIERHNGGNHKYRMGLNTFSDMTFDEF--R 86

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
           + F  +E   +   A +         V   G  PD+ DWRKK N      +Q  CGSCW 
Sbjct: 87  SSFLLTEP--QNCSATKGT------HVSSKGLYPDSVDWRKKGNYVTNVKNQGPCGSCWT 138

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGKL++ S+ QLV+CA+  +  G
Sbjct: 139 FSTTG-----------------------CLESVTAISTGKLLQLSEQQLVDCAQAFNNHG 175

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY  +  GL +E DYPY   +G    C +   +   F  KD ++    + 
Sbjct: 176 CNGGLPSQAFEYIKYNKGLMTEDDYPYTAQDG---TCKFKPERAAAFV-KDVVNITMYDE 231

Query: 296 MKKI--LYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNI 350
           M  +  + +  P+S+   + SD +H ++G  +  + E  +  D + HAVL VGY +++  
Sbjct: 232 MGMVDAVARLNPVSMAYEVTSDFMHYHSG--VYSSSECHNTTDTVNHAVLAVGYDEENVT 289

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP    +G+F IERG N CG+   + Y  +
Sbjct: 290 PYWIVKNSWGPFWGMKGYFFIERGKNMCGLSACSSYPLV 328


>gi|302774134|ref|XP_002970484.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
 gi|300162000|gb|EFJ28614.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
          Length = 343

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 168/389 (43%), Gaps = 68/389 (17%)

Query: 13  KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 72
           KA+ +I  V LL  V  C     L      QV   ++   +EG            FK F+
Sbjct: 3   KALAII-LVGLLILVVCCSSSNRLDIGKIRQVTDNLEVKDVEGH-----------FKHFM 50

Query: 73  VKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEILCKTG 121
            K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+    G
Sbjct: 51  QKFGKVYGTTEEYVHRLKVFQANLAHVMSLKKQDPTAIH---GITSFADLTPEELSRFLG 107

Query: 122 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 181
           F+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSCW FS 
Sbjct: 108 FR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSCWTFST 157

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 241
            G                       ++EG   +KTGKL+  S+ QL++C  + +GC+G  
Sbjct: 158 TG-----------------------VVEGANFLKTGKLISLSEEQLIDCDYKDNGCEGGD 194

Query: 242 FEPSIEYTHQAGLESEKDYPYKNANGEKFK-----CAYDKSKVKLFTGKDFLHFNGSETM 296
              + EY    GLE+E+DYPY+   G + K     C Y  SKV              + +
Sbjct: 195 MLSAYEYVKARGLEAEEDYPYEEL-GYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQI 253

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
              L K GPLS+ L  +++  Y G         C P ++ H VLLVGYG ++ + YW  +
Sbjct: 254 AANLVKNGPLSIALRGNVLFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENGLRYWTFK 310

Query: 357 NSWGPIGPDEGFFKIERGNNACGIEQIAG 385
           N+W     + G+F++ RG   C +    G
Sbjct: 311 NTWTDEFGENGYFRLCRGVGVCDMNSEVG 339


>gi|449516391|ref|XP_004165230.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 387

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 157/346 (45%), Gaps = 69/346 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG   + TG+LV  S+ QLV+C  +C     
Sbjct: 172 STTGA-----------------------LEGANFLATGELVSLSEQQLVDCDHECDPEEE 208

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     + EYT +AG L  E+DYPY  A  ++  C +DKSK+      +F  
Sbjct: 209 DACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPY--AGIDRNTCNFDKSKIAASIA-NFSV 265

Query: 290 FNG--SETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGY 344
            N    + +   L K GPL++ +N+  +  Y G    P       CS   L H VLLVGY
Sbjct: 266 VNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGY 319

Query: 345 GKQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G     P       YW+++NSWG    + G++KI RG N CG++ +
Sbjct: 320 GSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSL 365


>gi|297297049|ref|XP_002804951.1| PREDICTED: cathepsin H [Macaca mulatta]
          Length = 323

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 131

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 132 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 168

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  +      
Sbjct: 169 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDE 224

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 225 EAMVEAVALYNPVSFAF--EVTQDFMIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYG 277

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 278 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318


>gi|38045864|gb|AAR08900.1| cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 138/296 (46%), Gaps = 48/296 (16%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 162
           G ++F+D + EE   K         Y R +     +    +  E  D  VP++ DWR+  
Sbjct: 68  GLNQFTDMTFEEFKAK---------YLREIPRASDIHSHGIPYEANDRAVPESIDWREFG 118

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
                 DQ  CGSCWAFS  G                        +EGQY       + F
Sbjct: 119 YVTEVKDQGDCGSCWAFSATGA-----------------------MEGQYMKNQKANISF 155

Query: 223 SKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSKV 279
           S+ QLV+C+      GC G F E + EY ++ GLE+E  YPYK    E+  C YD +  V
Sbjct: 156 SEQQLVDCSGDYGNRGCSGGFMEHAYEYLYEVGLETESSYPYK---AEEGPCKYDSRLGV 212

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGH 337
               G  F HF     +  ++   GP +V ++  SD +    G    +N   CS   L H
Sbjct: 213 AKVNGFYFDHFGVESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSEKLNH 269

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 392
           A+L+VGYG QD   YW+V+NSWG +  D G+ ++ R  +N CG   IA +A++ VV
Sbjct: 270 AMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCG---IASFASLPVV 322


>gi|4581057|gb|AAD24589.1|AF139913_1 cysteine protease [Trypanosoma congolense]
          Length = 440

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 152/342 (44%), Gaps = 49/342 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 HSSWAFSAIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC G F +P+ ++   +++  + +E+ YPY +  G    C  DKS KV     +D + 
Sbjct: 185 DFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVD 242

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               E  + + L K GP+++ +++     Y G  +     +C    L H VLLVGY    
Sbjct: 243 LPRDENAIAEWLAKKGPVAIAVDATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             PYW+++NSWG    +EG+ +IE+G N C ++ +   A + 
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLMKNLPSSAVVS 340


>gi|1163075|emb|CAA81061.1| cysteine proteinase [Trypanosoma congolense]
          Length = 442

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 152/343 (44%), Gaps = 51/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 30  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 89

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 90  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 142

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 143 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTT 179

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H 
Sbjct: 180 DYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHI 236

Query: 291 N---GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           N       + + L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 237 NLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYDDT 292

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 293 SKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 335


>gi|402875039|ref|XP_003901328.1| PREDICTED: pro-cathepsin H [Papio anubis]
          Length = 335

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 237 EAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYG 289

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 290 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|343477225|emb|CCD11889.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 152/343 (44%), Gaps = 51/343 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ AC
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAVDWRKKGAVTPVKDQGAC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTT 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G   + S+++   +++  + + + YPY +  G+   C  +KS  K+   K   H 
Sbjct: 185 DYGCRGGLMDKSLQWIVSSNKGNVFTAQSYPYASGGGKMPPC--NKSG-KVVGAKISGHI 241

Query: 291 N---GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           N       + + L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 242 NLPKDENAIAEWLAKNGPVAIAVDATSFLGYKGGVL----TSCISKGLDHDVLLVGYDDT 297

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSW     +EG+ +IE+G N C ++  A  A + 
Sbjct: 298 SKPPYWIIKNSWSKGWGEEGYIRIEKGTNQCLMKNYARSAVVS 340


>gi|38683931|gb|AAR27011.1| cysteine protease [Periserrula leucophryna]
          Length = 283

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 139/316 (43%), Gaps = 49/316 (15%)

Query: 88  RFEYFKQDGHKKH---------ERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREK 138
           RF+ F+++  K +           YG ++FSD + EE           R Y     D   
Sbjct: 2   RFKIFRENMKKINTLNDNELGDAEYGVTQFSDLAEEEF---------RRYYLTPKWDLSH 52

Query: 139 VEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
              ++     D   P ++DWR  N   P  +Q  CGSCWAFS                  
Sbjct: 53  RPDLVRAKIPDVDPPASFDWRDHNAVTPVKNQGMCGSCWAFSTTEN-------------- 98

Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESE 257
                    +EGQ+AI   KLV  S+ +LV+C K   GC+G        E     GLESE
Sbjct: 99  ---------IEGQWAIHRNKLVSLSEQELVDCDKLDDGCEGGLPVNAYEEIIRLGGLESE 149

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD 317
           K YPY   + E  KC +    V ++        +    M   LYK GP+S+ +N+  +  
Sbjct: 150 KKYPY---DAEDEKCKFTVGDVAVYINSSVNISSNEADMAAWLYKNGPISIGINAFAMQF 206

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQ----DNIPYWLVRNSWGPIGPDEGFFKIER 373
           Y G         CSP +L H VL+VGYG +     + PYW+V+NSWG     +G++ + R
Sbjct: 207 YMGGVSHPFSFLCSPDELDHGVLIVGYGTKKGWFSDSPYWIVKNSWGASWGVQGYYLVYR 266

Query: 374 GNNACGIEQIAGYATI 389
           G+  CG+ ++   A +
Sbjct: 267 GDGVCGLNKMPTSAIV 282


>gi|391333246|ref|XP_003741030.1| PREDICTED: digestive cysteine proteinase 2-like [Metaseiulus
           occidentalis]
          Length = 327

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 131/290 (45%), Gaps = 40/290 (13%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           R G S F+D +PEEI   T    S+ T         K      +      + +A DWR+ 
Sbjct: 70  RMGLSRFTDATPEEIRSLTCLNISDST------STGKSNGNSFDTIDITELSEAVDWRQN 123

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  DQ  CGSCWAF+                         G +EGQY  KTG+LV 
Sbjct: 124 GYVTPVKDQGKCGSCWAFAA-----------------------TGAVEGQYFKKTGQLVS 160

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV- 279
            S+  LV+C +   GC+G +F  S EY     G+ +E  Y Y+   G    C +    + 
Sbjct: 161 LSEQNLVDCDRSSDGCEGGYFYESFEYIRSNGGIATESSYGYEATAG---SCRFTADSIG 217

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHA 338
              +G+D +     E + K +   GP+SV ++  D    Y+       D  CS     HA
Sbjct: 218 ATVSGRDSVASGDEEALLKAVASIGPISVTIDVIDTFRHYSSGVYY--DAECSSSSRNHA 275

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGY 386
           VL+VGYG +    YWLV+NSWG    ++G+ K+ R  GNN CGI   AGY
Sbjct: 276 VLVVGYGTEAGGDYWLVKNSWGTSFGEQGYIKMARNKGNN-CGIASEAGY 324


>gi|119964630|ref|YP_950826.1| cathepsin [Maruca vitrata MNPV]
 gi|119514473|gb|ABL76048.1| cathepsin [Maruca vitrata MNPV]
          Length = 324

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 162/335 (48%), Gaps = 52/335 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F+ F+++  + Y ++ E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSAAKYEINKFSDLSKDETIAK 87

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWA
Sbjct: 88  YTGLSLPIQT--------QNFCKVIVLDQPPGKGPFEFDWRRLNKVTNVKNQGVCGACWA 139

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+                           LE Q+A+K  +L++ S+ Q+++C    +GC+
Sbjct: 140 FAALAS-----------------------LESQFAMKHNQLIDLSEQQMIDCDSVDAGCN 176

Query: 239 GCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGSET 295
           G     + E      G++ EKDYPY+ AN     C  + +K  L   KD   +     E 
Sbjct: 177 GGLLHTAFEAVIKMGGVQLEKDYPYEAANNN---CRMNSNKF-LVKVKDCYRYIIVYEEK 232

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW  
Sbjct: 233 LKDLLRSVGPIPMAIDAADIVNYKQGIIK----YCLNSGLNHAVLLVGYGVENNIPYWTF 288

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           +N+WG    + G+F++++  NACG+  ++A  A I
Sbjct: 289 KNTWGTDWGESGYFRLQQNINACGMRNELASTAVI 323


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 151/337 (44%), Gaps = 51/337 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILC 118
           +F  F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D        
Sbjct: 60  SFARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-------- 111

Query: 119 KTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                W E   +R+ A +      K  ++V  +  +P+  DWR+  +  P  +Q  CGSC
Sbjct: 112 ---LTWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKDWREAGIVSPVKNQGKCGSC 167

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE  Y+   GK +  S+ QLV+CA   + 
Sbjct: 168 WTFSTTGA-----------------------LEAAYSQAFGKGISLSEQQLVDCAGAFNN 204

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
            GC+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +     
Sbjct: 205 FGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAE 262

Query: 294 ETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           + +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +PY
Sbjct: 263 DELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGVPY 322

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           WL++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 323 WLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|2351557|gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 51/327 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F+ F+    + Y++  E   RF+ F+        ++ +    +Y  ++FSD S +E + K
Sbjct: 28  FEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDLSKDETISK 87

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCW 177
            TG           + ++   E +++    D GP+   +DWR+ N      +Q  CG+CW
Sbjct: 88  YTGLSLP-------LQNQNFCEVVVLNRPPDKGPLE--FDWRRLNKVTSVKNQGTCGACW 138

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGC 237
           AF+  G                        LE Q+AIK  +L+  S+ QL++C     GC
Sbjct: 139 AFATLGS-----------------------LESQFAIKHDQLINLSEQQLIDCDFVDMGC 175

Query: 238 DGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG-SET 295
           DG     + E   +  G+++E DYPY+  NG+   C  + +K  +   K + +     E 
Sbjct: 176 DGGLLHTAYEAVMNMGGIQAENDYPYEANNGD---CRANAAKFVVKVKKCYRYITVFEEK 232

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +K +L   GP+ V +++  I +Y     R   + C+ + L HAVLLVGY  Q+ +P+W++
Sbjct: 233 LKDLLRSVGPIPVAIDASDIVNYK----RGIMKYCANHGLNHAVLLVGYAVQNGVPFWIL 288

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQ 382
           +N+WG    ++G+F++++  NACGI+ 
Sbjct: 289 KNTWGADWGEQGYFRVQQNINACGIQN 315


>gi|33242870|gb|AAQ01139.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 165/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y T   GL++E+ YPY   + E   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYITANGGLDTEESYPYTATDDE--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|109082090|ref|XP_001108862.1| PREDICTED: cathepsin H isoform 2 [Macaca mulatta]
          Length = 335

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 237 EAMVEAVALYNPVSFAF--EVTQDFMIYKTGIYSSTSCHK-----TPDKVNHAVLAVGYG 289

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 290 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|355692920|gb|EHH27523.1| Cathepsin H, partial [Macaca mulatta]
          Length = 305

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 114 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 150

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  +      
Sbjct: 151 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYAE 206

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 207 EAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYG 259

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 260 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 159/334 (47%), Gaps = 55/334 (16%)

Query: 75  RGRQYANDEEIKERFEYFKQ----DGHK-KHE------RYGTSEFSDRSPEEILCKTGFK 123
            G+ Y +DEE   R  ++K     + H  +H+      R G ++F+D + EE     G K
Sbjct: 26  HGKSYGHDEEHFRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKFTDMTSEEFRNFKGLK 85

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
           +     +R     +K  ++L E      +P   DWR+K    P  +Q  CGSCWAFS  G
Sbjct: 86  FDATKTKRNGTRFQK--ELLGEA-----LPTQVDWREKGYVTPVKNQGQCGSCWAFSTTG 138

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCF 241
                                   LEGQ+   TGKLV  S+  LV+C++    +GC+G  
Sbjct: 139 S-----------------------LEGQHFKATGKLVSLSEQNLVDCSRVEGNNGCNGGL 175

Query: 242 FEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF--NGSETMKK 298
            +    Y  Q  G+++E+ YPY   +G+   CA++++ V     K F+         ++ 
Sbjct: 176 MDNGFTYIQQNGGIDTEESYPYTGKDGD---CAFNENSVGARV-KGFVDVPQRDEAALQA 231

Query: 299 ILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
            +   GP+SV +++  D    Y       ++ +CS   L H VL+VGYG ++ + YWLV+
Sbjct: 232 AVASVGPVSVAIDASNDSFQYYKEGVY--DEPSCSFSQLDHGVLVVGYGTENGVDYWLVK 289

Query: 357 NSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           NSWGP    +G+ K+ R   N CGI  +A Y T+
Sbjct: 290 NSWGPTWGQDGYIKMMRNKENQCGIASMASYPTV 323


>gi|146335576|gb|ABQ23397.1| cathepsin L [Trypanosoma carassii]
          Length = 456

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 140/340 (41%), Gaps = 46/340 (13%)

Query: 61  NENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRS 112
           N  +   F AF  + G+ Y +  E   R   F++             H ++G ++FSD +
Sbjct: 29  NGGLAAQFAAFKAEHGKSYTSAAEEGYRMRVFEESMKAAQAHAAANPHAKFGVTKFSDLT 88

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
            EE   KT +                 ++    V   G  PD WDWRKK    P  DQ  
Sbjct: 89  HEEF--KTLYA------NGAAHFAAAAKRARRPVSVTGTAPDEWDWRKKGAVTPVKDQGH 140

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCW FS  G                        +EGQ+A+   +L   S+  LV C  
Sbjct: 141 CGSCWTFSTTGN-----------------------IEGQWAVAGNELTNLSEQMLVSCDA 177

Query: 233 QCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
           +  GC G   + + E+    +   + +E+ YPY + +G+   C     KV          
Sbjct: 178 RDYGCSGGLMDNAFEWIVNQNDGFVFTEESYPYASGSGDAPLCDVGGRKVGATIKGHVGL 237

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            N  E M   L   GP+S+ +++D    Y G  +      C    L H VLLVGY K  N
Sbjct: 238 PNDEEKMAAWLAANGPISIAVDADSFKAYKGGVLTG----CEEGQLDHGVLLVGYNKVAN 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            PYW+++NSWGP   + G+ ++  G N C +   A  A +
Sbjct: 294 PPYWIIKNSWGPNWGEHGYIRVGFGTNQCNLNSYACSAIV 333


>gi|38344381|emb|CAD40319.2| OSJNBb0054B09.3 [Oryza sativa Japonica Group]
 gi|116309071|emb|CAH66180.1| OSIGBa0130O15.4 [Oryza sativa Indica Group]
 gi|116309098|emb|CAH66205.1| OSIGBa0148D14.11 [Oryza sativa Indica Group]
          Length = 381

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 72/354 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER------YGTSEFSDRSPEEILCK 119
           F +F  + GR Y +  E   R   F  +    ++H+R      +G ++FSD +P E   +
Sbjct: 58  FASFERRFGRTYRDAGERAYRMSVFAANLRRARRHQRLDPTATHGVTKFSDLTPGEF--R 115

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F    R     +   E  E  ++    DG +PD +DWR+    GP  DQ +CGSCW+F
Sbjct: 116 DRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHGAVGPVKDQGSCGSCWSF 172

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S +                       G LEG + + TGKL   S+ Q+V+C  +C     
Sbjct: 173 STS-----------------------GALEGAHFLATGKLEVLSEQQMVDCDHECDASES 209

Query: 235 ----SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               SGC+G     +  Y  ++ GL+SEKDYPY    G +  C +DKSK+ +   K+F  
Sbjct: 210 RACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTCKFDKSKI-VAQVKNFSV 265

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 344
            + +E  +   L K+GPL++ +N+  +  Y G           P+     L H VLLVGY
Sbjct: 266 ISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSCPFICGRHLDHGVLLVGY 318

Query: 345 GKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQIAGYAT 388
           G            PYW+++NSWG    ++G++KI RG    N CG++ +    T
Sbjct: 319 GSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVT 372


>gi|31982433|ref|NP_031828.2| cathepsin K precursor [Mus musculus]
 gi|12644320|sp|P55097.2|CATK_MOUSE RecName: Full=Cathepsin K; Flags: Precursor
 gi|3550487|emb|CAA06825.1| cathepsin K [Mus musculus]
 gi|12834090|dbj|BAB22783.1| unnamed protein product [Mus musculus]
 gi|28277388|gb|AAH46320.1| Cathepsin K [Mus musculus]
 gi|74209960|dbj|BAE21279.1| unnamed protein product [Mus musculus]
 gi|148706870|gb|EDL38817.1| cathepsin K, isoform CRA_a [Mus musculus]
          Length = 329

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS A                       G LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSA-----------------------GALEGQLKKKTGKLLALSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  Q  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYV---GQDESCMYNATAKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+V
Sbjct: 222 RGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFPKM 329


>gi|302793594|ref|XP_002978562.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
 gi|300153911|gb|EFJ20548.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
          Length = 343

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 150/334 (44%), Gaps = 56/334 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----------KQDGHKKHERYGTSEFSDRSPEEI 116
           FK F+ K G+ Y   EE   R + F           KQD    H   G + F+D +PEE+
Sbjct: 46  FKHFMQKFGKVYGTTEEYVHRLKVFQANLVHVMSLKKQDPTAIH---GITSFADLTPEEL 102

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
               GF+       +  ++R   +  L+  +    +P+A+DWR+     P   Q  CGSC
Sbjct: 103 SRFLGFR-------KAYSNRVVNQAPLLPTDN---LPEAFDWREHGAVTPVKFQGRCGSC 152

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           W FS  G                       ++EG   +KTGKL+  S+ QL++C  + +G
Sbjct: 153 WTFSTTG-----------------------VVEGANFLKTGKLISLSEEQLIDCDYKDNG 189

Query: 237 CDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK-----CAYDKSKVKLFTGKDFLHFN 291
           C+G     + EY    GLE+++DYPY+   G + K     C Y  SKV            
Sbjct: 190 CEGGDMLSAYEYVKARGLEADEDYPYEEL-GYRHKPVRGPCRYQPSKVVATIANYSRVSE 248

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             + +   L K GPLS+ L  +++  Y G         C P ++ H VLLVGYG ++ + 
Sbjct: 249 DEDQIAANLVKNGPLSIALRGNVLFTYEGGV--ACPRIC-PGEINHGVLLVGYGVENGLR 305

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 385
           YW  +NSW     + G+F++ RG   C +    G
Sbjct: 306 YWTFKNSWTDEFGENGYFRLCRGVGVCDMTSEVG 339


>gi|14349349|gb|AAC38833.2| cysteine protease [Leishmania chagasi]
          Length = 353

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 155/363 (42%), Gaps = 54/363 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 17  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 76

Query: 96  GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 77  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 132

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
                 DWR+K V  P  +Q  CGSCWAF+  G                        +EG
Sbjct: 133 ------DWREKGVVTPVKNQGMCGSCWAFATTGN-----------------------IEG 163

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANG 267
           Q+A+K   LV  S+  LV C     GC+G   + ++++    H   + +E  YPY +A G
Sbjct: 164 QWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMQQAMQWIINDHNGTVPTEDSYPYTSAGG 223

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
            +  C +D   V           +  E +   + K GP++V +++     Y G  +    
Sbjct: 224 TRPPC-HDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV---- 278

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
             C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++  A  A
Sbjct: 279 TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYAVTA 338

Query: 388 TID 390
           TID
Sbjct: 339 TID 341


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 159/350 (45%), Gaps = 69/350 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 115
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 116 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
            +  + GFK   R Y+     RE    +  E  +D  +P   DWR K    P  +Q  CG
Sbjct: 87  FVSTRNGFK---RNYKD--QPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQCG 141

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 233
           SCWAFS  G                        LEGQ+  K+G +V  S+  LV+C+   
Sbjct: 142 SCWAFSATGS-----------------------LEGQHFRKSGSMVSLSEQNLVDCSTDF 178

Query: 234 -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
             +GC+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F+   
Sbjct: 179 GNNGCEGGLMDNAFKYIRANKGIDTEKSYPY---NGTDGTCHFKKSTVGA-TDSGFVDIK 234

Query: 292 -GSET-MKKILYKYGPLSVLLN---------SDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
            GSET +KK +   GP+SV ++         SD ++D         +  C    L H VL
Sbjct: 235 EGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYD---------EPECDSESLDHGVL 285

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +VGYG  +   YWLV+NSWG    DEG+ ++ R   N CGI   A Y  +
Sbjct: 286 VVGYGTLNGTDYWLVKNSWGTTWGDEGYIRMSRNKKNQCGIASSASYPLV 335


>gi|395852405|ref|XP_003798729.1| PREDICTED: cathepsin W [Otolemur garnettii]
          Length = 367

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 165/348 (47%), Gaps = 55/348 (15%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----KHERYGTSEF-----SDRSPEEI 116
           E FK F V+  R Y+N  E   R + F  +  K    + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQVQFNRSYSNPAEHSRRLDIFAHNLAKAQQLQEEDLGTAEFGMTSLSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 175
               G       +++ V +  ++ + +   ++   +P   DWR K  +     +Q  C  
Sbjct: 100 GKIFG-------HQKAVGEVPRMGRKVGSEQQGETLPRTCDWRNKAGIISRIKNQENCKC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + A                         +E  + IK  + VE S  +L++C +   
Sbjct: 153 CWAMAAADN-----------------------IEALWGIKYHQSVEVSVQELLDCNRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  I   + +GL SEKDYP+K A+ +  +C  +K + K+   +DF+    +E
Sbjct: 190 GCQGGFVWDAFITVLNNSGLASEKDYPFK-ASVKTHRCLANKYR-KVAWIQDFIMLEDNE 247

Query: 295 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD----- 348
             + + L  +GP++V +N  L+  Y    I+    TC P  + H+VLLVG+G +      
Sbjct: 248 HKIAQYLATHGPITVTINMKLLQHYKKGVIKAKPTTCDPQLVNHSVLLVGFGAETVSSQS 307

Query: 349 ------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                 + PYW+++NSWG    +EG+F++ RG+N+CGI +    A +D
Sbjct: 308 HLRPHRSTPYWILKNSWGAHWGEEGYFRLHRGSNSCGITKYPFTARVD 355


>gi|194689248|gb|ACF78708.1| unknown [Zea mays]
 gi|414885653|tpg|DAA61667.1| TPA: cysteine protease2 [Zea mays]
          Length = 360

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 47/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAVA-------LPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC 237
           S  G                        LE  Y   TGK +  S+ QL++C  A    GC
Sbjct: 171 STTGA-----------------------LEAAYTQATGKPISLSEQQLIDCGFAFNNFGC 207

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET 295
           +G     + EY  +  GL++E+ YPY+  NG  KFK   +   VK+    + +     + 
Sbjct: 208 NGGLPSQAFEYIKYNGGLDTEESYPYQGVNGICKFK--NENVGVKVLDSVN-ITLGAEDE 264

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D +PYWL
Sbjct: 265 LKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWL 324

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 325 IKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|291410711|ref|XP_002721635.1| PREDICTED: cathepsin H [Oryctolagus cuniculus]
          Length = 333

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 165/356 (46%), Gaps = 62/356 (17%)

Query: 51  LAIEGSLTFDNENILE-TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-------- 101
           L   G+  F   N+ +  FK+++ +  ++Y+  EE   R + F ++  K +         
Sbjct: 15  LGAPGADAFSANNLEKFHFKSWMSQHHKKYS-AEEYPRRLQTFVRNWRKINAHNNGNHTF 73

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           + G ++FSD S  EI  K  + W+E   +   A +         +   GP P + DWRKK
Sbjct: 74  QMGLNQFSDMSFAEI--KHKYLWTEP--QNCSATKSNY------LRGTGPYPSSVDWRKK 123

Query: 162 -NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
            N   P  +Q ACGSCW FS  G                        LE   AI  GK++
Sbjct: 124 GNFVSPVKNQGACGSCWTFSTTGA-----------------------LESAVAIAGGKML 160

Query: 221 EFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS 277
             ++ QLV+CA+  +  GC+G     + EY  +  G+  E  YPY+   G   +C +   
Sbjct: 161 SLAEQQLVDCAQNFNNHGCEGGLPSQAFEYILYNKGIMGEDSYPYRAMEG---RCKFQPQ 217

Query: 278 KVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC-- 330
           K   F  KD   +  N  E M + +  Y P+S     ++  D+     RK   +  +C  
Sbjct: 218 KAIAFV-KDVANITLNDEEAMVEAVALYNPVSFAF--EVTEDF--MQYRKGIYSSTSCHK 272

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +P  + HAVL VGYG+++ +PYW+V+NSWG      G+F IERG N CG+   A Y
Sbjct: 273 TPDKVNHAVLAVGYGEENGVPYWIVKNSWGSHWGMNGYFYIERGKNMCGLAACASY 328


>gi|31981819|ref|NP_034115.2| cathepsin W preproprotein [Mus musculus]
 gi|341940311|sp|P56203.2|CATW_MOUSE RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
 gi|26353368|dbj|BAC40314.1| unnamed protein product [Mus musculus]
 gi|44890089|gb|AAS48498.1| cathepsin W precursor [Mus musculus]
 gi|148701190|gb|EDL33137.1| cathepsin W, isoform CRA_b [Mus musculus]
 gi|162317774|gb|AAI56226.1| Cathepsin W [synthetic construct]
 gi|162318342|gb|AAI56999.1| Cathepsin W [synthetic construct]
          Length = 371

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 161/354 (45%), Gaps = 61/354 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + A                         ++  + IK  + V+ S  +L++C +  +
Sbjct: 151 CWAMAAADN-----------------------IQALWRIKHQQFVDVSVQELLDCERCGN 187

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC+G F ++  +   + +GL SEKDYP++  + +  +C   K K K+   +DF    N  
Sbjct: 188 GCNGGFVWDAYLTVLNNSGLASEKDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNE 245

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ------ 347
           + +   L  +GP++V +N  L+  Y    I+    +C P  + H+VLLVG+GK+      
Sbjct: 246 QAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKEKEGMQT 305

Query: 348 -----------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                       + PYW+++NSWG    ++G+F++ RGNN CG+ +    A +D
Sbjct: 306 GTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTAQVD 359


>gi|410493601|ref|YP_006908539.1| V-CATH [Epinotia aporema granulovirus]
 gi|354805035|gb|AER41457.1| V-CATH [Epinotia aporema granulovirus]
          Length = 329

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 155/336 (46%), Gaps = 49/336 (14%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSD 110
           +D  N    F  F++K  + YA DEE   ++E F+ +    +E+        Y  +  SD
Sbjct: 19  YDLNNSQALFDDFVIKYNKVYATDEERAAKYEIFRNNLVVINEKNSKTTNALYDINRLSD 78

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            +  E+L  TGF       ++ +   ++ E +L+       +P ++DWR  N   P  +Q
Sbjct: 79  LNKNELLRSTGFS---VNLKKNLNPSKECEYVLVADAPSRSLPASFDWRANNAVTPVKNQ 135

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS                           +E  YAIK G  V+ ++  L+ C
Sbjct: 136 LDCGSCWAFSTIAN-----------------------IESLYAIKYGVEVDLAEQYLLNC 172

Query: 231 AKQCSGCDGCFFEPSIE---YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
               + C+G     ++E        G+  E+  PY    GE   C  DK +  LFT  + 
Sbjct: 173 DYTNNNCNGGLMHWALENILINDNGGVVEERHAPYV---GEVTAC--DKEEY-LFTITNC 226

Query: 288 LHFN--GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             FN     T++++L + GP+SV ++   I DY       +D   S   L HAVLLVGYG
Sbjct: 227 KRFNLVNEHTLQQLLIENGPISVAIDVFDILDYKQGI---SDNCRSDNGLNHAVLLVGYG 283

Query: 346 KQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
              N IPYW+ +NSWG    ++GFF++ R  N+CG+
Sbjct: 284 VSINGIPYWVFKNSWGDDWGEQGFFRVRRDINSCGM 319


>gi|2582055|gb|AAB82455.1| lymphopain [Mus musculus]
          Length = 371

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 161/354 (45%), Gaps = 61/354 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y N  E   R   F     Q    + E  GT+EF     SD + EE 
Sbjct: 38  EVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEF 97

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G    ER+ ER     +KVE           VP   DWRK KN+     +Q +C  
Sbjct: 98  GQLYG---QERSPERTPNMTKKVESNTW----GESVPRTCDWRKAKNIISSVKNQGSCKC 150

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + A                         ++  + IK  + V+ S  +L++C +  +
Sbjct: 151 CWAMAAADN-----------------------IQALWRIKHQQFVDVSVQELLDCERCGN 187

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC+G F ++  +   + +GL SEKDYP++  + +  +C   K K K+   +DF    N  
Sbjct: 188 GCNGGFVWDAYLTVLNNSGLASEKDYPFQ-GDRKPHRCLAKKYK-KVAWIQDFTMLSNNE 245

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------- 346
           + +   L  +GP++V +N  L+  Y    I+    +C P  + H+VLLVG+GK       
Sbjct: 246 QAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQT 305

Query: 347 ----------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                     + + PYW+++NSWG    ++G+F++ RGNN CG+ +    A +D
Sbjct: 306 GTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGVTKYPFTAQVD 359


>gi|94420703|gb|ABF18679.1| cysteine protease [Medicago sativa]
          Length = 350

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 156/340 (45%), Gaps = 57/340 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   
Sbjct: 50  SFARFANRYGKRYDTVDEMKRRFKIFSENLQLIESTNKKRLGYTLGVNHFADWTWEEF-- 107

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           ++    + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW 
Sbjct: 108 RSHRLGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWT 159

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  YA   GK +  S+ QLV+CA   +  G
Sbjct: 160 FSTTGA-----------------------LESAYAQAFGKNISLSEQQLVDCAGAFNNFG 196

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSE 294
           C+G     + EY  +  GLE+E+ YPY   NG    C +    V +   G   +     +
Sbjct: 197 CNGGLPSQAFEYIKYNGGLETEEAYPYTGQNG---PCKFTSEDVAVQVLGSVNITLGAED 253

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRK---NDETC--SPYDLGHAVLLVGYGKQDN 349
            +K  +    P+SV    +++ D+     +K      TC  +P D+ HAVL VGYG +D 
Sbjct: 254 ELKHAVAFARPVSVAF--EVVDDFR--LYKKGVYTSTTCGNTPMDVNHAVLAVGYGIEDG 309

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 310 VPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVV 349


>gi|356565778|ref|XP_003551114.1| PREDICTED: thiol protease aleurain-like [Glycine max]
          Length = 353

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 51/337 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y + +EI+ RF  F  +       +++   Y  G + F+D        
Sbjct: 53  SFARFARRHGKRYRSVDEIRNRFRIFSDNLKLIRSTNRRSLTYTLGVNHFAD-------- 104

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
              + W E T  ++ A +     +       D  +PD  DWRK+ +     DQ  CGSCW
Sbjct: 105 ---WTWEEFTRHKLGAPQNCSATLKGNHRLTDAVLPDEKDWRKEGIVSQVKDQGNCGSCW 161

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE  YA   GK +  S+ QLV+CA   +  
Sbjct: 162 TFSTTG-----------------------ALEAAYAQAFGKNISLSEQQLVDCAGAFNNF 198

Query: 236 GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGS 293
           GC+G     + EY  +  GL++E+ YPY   +G    C +    V +       +     
Sbjct: 199 GCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---VCKFTAKNVAVRVIDSINITLGAE 255

Query: 294 ETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           + +K+ +    P+SV    +     YN           +P D+ HAVL VGYG +D +PY
Sbjct: 256 DELKQAVAFVRPVSVAFEVAKDFRFYNNGVYTSTICGSTPMDVNHAVLAVGYGVEDGVPY 315

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           W+++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 316 WIIKNSWGSNWGDNGYFKMELGKNMCGVATCASYPVV 352


>gi|156046107|gb|ABU42573.1| cathepsin H variant 2 [Sus scrofa]
          Length = 321

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 156/337 (46%), Gaps = 73/337 (21%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           FK+++V+  ++Y+  EE   R + F     K D H       + G ++FSD S +EI  K
Sbjct: 35  FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKIDAHNAGNHTFKLGLNQFSDMSFDEIRHK 93

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q +CGSCW 
Sbjct: 94  --YLWSEP--QNCSATKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS  G                        LE   AI TGK++  ++ QLV+CA+      
Sbjct: 144 FSTTGA-----------------------LESAVAIATGKMLSLAEQQLVDCAQ------ 174

Query: 239 GCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSET 295
                 + EY  +  G+  E  YPYK   G+   C +   K   F  KD   +  N  E 
Sbjct: 175 ------NFEYIRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEA 224

Query: 296 MKKILYKYGPLSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
           M + +  Y P+S    + N  L++    Y+ T   K     +P  + HAVL VGYG+++ 
Sbjct: 225 MVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENG 279

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 280 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 316


>gi|226468424|emb|CAX69889.1| Temporarily Assigned Gene name [Schistosoma japonicum]
          Length = 454

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 153/343 (44%), Gaps = 55/343 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 112
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 113 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            +E   +T     W   +    ++ R +V          G +P+ +DWRKK       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWRKKGAVTEVKNQ 258

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C
Sbjct: 259 GMCGSCWAFSTTGN-----------------------IESQWFRKTGKLLSLSEQQLVDC 295

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                GC+G    PS  Y       GL  E +YPY   N    KC    + V  +     
Sbjct: 296 DNLDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSV 350

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-K 346
                   +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  
Sbjct: 351 NLTQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVS 410

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           + N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 411 EKNEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTDATSALI 453


>gi|26245875|gb|AAN77413.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 287

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 139/311 (44%), Gaps = 48/311 (15%)

Query: 88  RFEYFKQDGHKKHERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 145
           R E   Q+  +    Y  G ++F+D +PEE +            ER    R+   K L E
Sbjct: 16  RIEEHNQNFSRGLSTYEMGVNKFADLTPEEFM------------ERFRPLRKTKPKFLSE 63

Query: 146 VEK---DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLL 202
             K   DG +P   DW K+        Q +CGSCWAFS  G                   
Sbjct: 64  QAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGSCWAFSTTGS------------------ 105

Query: 203 IFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPY 262
                +E    IKTGKL+  S+ QLV+C K  SGC G + + ++EY    G+ SE DYPY
Sbjct: 106 -----VESHNFIKTGKLISLSEQQLVDCVKNNSGCAGGWMDIALEYIEADGIMSEDDYPY 160

Query: 263 KNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGT 321
           +  N     C ++ SK  +       +  N    ++K +   GP+ V +   +       
Sbjct: 161 EERNT---TCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVPVAIEVTIAFQLYAR 217

Query: 322 PIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNAC 378
            I  ND  C  +  DL HAVL+ GYG QD   YW+V+NSWG     +G+ ++ R  +N C
Sbjct: 218 GIL-NDPQCKNTEGDLTHAVLVTGYGSQDGKDYWIVKNSWGAEYGMDGYLRMSRNADNQC 276

Query: 379 GIEQIAGYATI 389
           GI   A Y  +
Sbjct: 277 GIATRASYPVL 287


>gi|6978721|ref|NP_037071.1| pro-cathepsin H precursor [Rattus norvegicus]
 gi|115729|sp|P00786.1|CATH_RAT RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|55886|emb|CAA68699.1| cathepsin H pre-pro-peptide [Rattus norvegicus]
 gi|55391460|gb|AAH85352.1| Cathepsin H [Rattus norvegicus]
 gi|149018921|gb|EDL77562.1| cathepsin H, isoform CRA_a [Rattus norvegicus]
 gi|226475|prf||1514114A cathepsin H
          Length = 333

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 148/338 (43%), Gaps = 51/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F +++ +  + Y+   E   R + F  +  K           + G ++FSD S  EI  K
Sbjct: 33  FTSWMKQHQKTYS-SREYSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEI--K 89

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 142 FSTTGA-----------------------LESAVAIASGKMMTLAEQQLVDCAQNFNNHG 178

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  G+  E  YPY   NG+   C ++  K   F      +  N   
Sbjct: 179 CQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPEKAVAFVKNVVNITLNDEA 235

Query: 295 TMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
            M + +  Y P+S     ++    Y       N    +P  + HAVL VGYG+Q+ + YW
Sbjct: 236 AMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYW 295

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           +V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 296 IVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 333


>gi|355778231|gb|EHH63267.1| Cathepsin H, partial [Macaca fascicularis]
          Length = 305

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 154/341 (45%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 5   FKSWMSKHHKTYST-EEYHHRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 61

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 62  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 113

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 114 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 150

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G+   C +   K   F  KD  +      
Sbjct: 151 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGD---CKFRPGKAIGFV-KDVANITIYDE 206

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 207 EAMVEAVALYNPVSFAF--EVTQDFMMYKTGIYSSTSCHK-----TPDKVNHAVLAVGYG 259

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 260 EENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 300


>gi|345798093|ref|XP_536212.3| PREDICTED: pro-cathepsin H [Canis lupus familiaris]
          Length = 350

 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 163/339 (48%), Gaps = 62/339 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           FK++ V+  ++Y+++E + +R + F     K + H       + G ++FSD +  EI  K
Sbjct: 49  FKSWAVQHQKKYSSEEYL-QRLQTFVGNWRKINAHNAGNHTFKMGLNQFSDMNFAEI--K 105

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN-VTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P   DWRKK     P  +Q +CGSCW 
Sbjct: 106 HKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGKFVSPVKNQGSCGSCWT 157

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AIK+GKL+  ++ QLV+CA+  +  G
Sbjct: 158 FSTTG-----------------------ALESAIAIKSGKLLSLAEQQLVDCAQNFNNHG 194

Query: 237 CDGCFFEP--SIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFN 291
           C G +  P  + EY  +  G+  E  YPYK  +G+   C Y  SK   F  KD   +  N
Sbjct: 195 CQG-YGAPLQAFEYIRYNKGIMGEDSYPYKGQDGD---CKYQPSKAIAFV-KDVANITIN 249

Query: 292 GSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQ 347
             + M + +  Y P+S    + SD +    G     +  +C  +P  + HAVL VGYG+Q
Sbjct: 250 DEQAMVEAVALYNPVSFAFEVTSDFMMYRKGI---YSSTSCHKTPDKVNHAVLAVGYGEQ 306

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           + IPYW+V+NSWGP     G+F +ERG N CG+   A Y
Sbjct: 307 NGIPYWIVKNSWGPQWGMNGYFLMERGKNMCGLAACASY 345


>gi|348564702|ref|XP_003468143.1| PREDICTED: cathepsin F-like [Cavia porcellus]
          Length = 462

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 149/340 (43%), Gaps = 51/340 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPE 114
           I   FK F+    R Y + EE + R   F          Q   +   +YG ++FSD + E
Sbjct: 161 IASLFKKFVATYNRTYESKEETQWRLSVFTRNMILAQKIQALDRGTAQYGVTKFSDLTEE 220

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E           RT       RE   K + + +      P  WDWRKK       +Q  C
Sbjct: 221 EF----------RTIYLNPLLREHPSKTMRQAKIVHDSAPPEWDWRKKGAVTEVKNQGMC 270

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS+ G                        +EGQ+ +K G L+  S+ +L++C K 
Sbjct: 271 GSCWAFSVTGN-----------------------VEGQWFLKKGTLLSLSEQELLDCDKV 307

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
              C G    P   Y+      GLE+E DY Y+   G    C +   K K++        
Sbjct: 308 DKACMGGL--PINAYSAIKSLGGLETEDDYSYQ---GHMEACNFSAKKAKVYINDSVELS 362

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + +   L   GP+S+ +N+  +  Y           CSP+ + HA+L+VGYGK+  +
Sbjct: 363 KNEQYLAAWLAVKGPISIAINAFGMQFYRHGIAHPLQPLCSPWFIDHAMLIVGYGKRSGV 422

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           P+W ++NSWG    +EG++ + RG+ +CG+  +A  A ++
Sbjct: 423 PFWAIKNSWGTDWGEEGYYYLHRGSRSCGVNVMASSAVVE 462


>gi|323454466|gb|EGB10336.1| hypothetical protein AURANDRAFT_22962 [Aureococcus anophagefferens]
          Length = 416

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 159/357 (44%), Gaps = 53/357 (14%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFS 109
           T D  +    F  FI +  + Y    E  +RF  F ++            H  +G + F+
Sbjct: 79  TLDTRDQKSLFDQFIDEYSKSYDTTHEYNDRFTIFSKNLNYIDALNTQNPHALFGLNVFA 138

Query: 110 DRSPEEILCKTGFKWSERTYERIV----ADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 164
           D++ EE   +     S   Y R+     +D           E D G +PD +DWR+    
Sbjct: 139 DQTEEERSKRRMTDPSITNYTRVGWASGSDCAACNLYPAFGEYDMGNLPDDFDWRELGAV 198

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
               +QA CGSCW+FS A                         LEG + + TG L  ++ 
Sbjct: 199 TRVKNQAYCGSCWSFSTAAD-----------------------LEGTHYLATGDLESYAP 235

Query: 225 SQLVECAKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYK-----NANGEKFKCAYDKSK 278
            QLVEC     GCDG +   +++Y +H  G+ + +  PYK     N   E    A+    
Sbjct: 236 QQLVECNTMNLGCDGGYPFAAMQYLSHFGGMVTWETMPYKKIELLNEKLEDGDVAHISGW 295

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY-NGTPIRKNDETCSPYDLGH 337
             +  G D+        M+  L K GPLS+  N++ +  Y +G     +  TC P  L H
Sbjct: 296 QMVAMGADY-----ESLMRVTLVKNGPLSIAFNANGMDYYVHGVDGDGDMFTCDPTSLDH 350

Query: 338 AVLLVGYGKQDN-----IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           AVL+VGYG Q       +PYW+++NSW  +  ++G++++ RG+NACG+  +  ++ +
Sbjct: 351 AVLVVGYGVQHTDGNGKVPYWVIKNSWDDVWGEDGYYRLVRGSNACGVANMVVHSIV 407


>gi|403352840|gb|EJY75943.1| Oryzain gamma chain [Oxytricha trifallax]
          Length = 338

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 162/363 (44%), Gaps = 60/363 (16%)

Query: 40  ITDQVVARVDTLAIEGSLTFDNENIL----ETFKAFIVKRGRQYANDEEIKERFEYFKQD 95
            T  +V  V   ++  S  F  E+ L    E F  +I + G+ YA   E ++R + F + 
Sbjct: 4   FTLAIVGIVSLSSVFASDAFLKESGLVSSTEEFLNYIARFGKSYATKAEFQKRAKLFLKT 63

Query: 96  GHKKHE----------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME 145
             +  +          R G ++FSD + EE     G K SE  ++        V    ++
Sbjct: 64  KMEIMQAASSNSVPTFRLGFNQFSDWTEEEFQAILGNKPSEEEHD--------VYHEHLK 115

Query: 146 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFP 205
           + +D  +P + DWR   V  P  DQ  CGSCWAFS A                       
Sbjct: 116 ILEDAILPASKDWRDDGVVNPVKDQGRCGSCWAFSTAAG--------------------- 154

Query: 206 GMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYK 263
             +E  +AI+ GKL   S+ QLV+C  A   +GC+G       +Y    GLE E DYPY 
Sbjct: 155 --VESHFAIQFGKLYSLSEQQLVDCSTAYDNAGCNGGLATQGYDYVKSYGLEQEADYPYL 212

Query: 264 NANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNG 320
            A+G    C  DKSK+  +  +DF  +       +K  L   GP SV ++ S +  +Y  
Sbjct: 213 AADG---TCHRDKSKIVAYV-EDFHTVQTLSPSQLKAALATQGPASVSVDASGVFKNYQS 268

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK--IERGNNAC 378
             +     T     L HA+L VGYG ++   Y++VRNSWGP   + G+ +  I  G   C
Sbjct: 269 GILNAGCGT----SLNHAILAVGYGVENGQEYYIVRNSWGPSWGENGYIRLAIVEGQGTC 324

Query: 379 GIE 381
           G++
Sbjct: 325 GVQ 327


>gi|338717354|ref|XP_001492337.3| PREDICTED: pro-cathepsin H-like [Equus caballus]
          Length = 323

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 157/341 (46%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++V+  ++Y+  EE   R + F  +  K +         R G ++FS  +  E+  K
Sbjct: 23  FKSWMVQHQKKYS-SEEYHHRLQTFVSNWRKINAHNTGNHTFRMGLNQFSAMNFAEL--K 79

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q  CGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKGNY------LRGAGPYPPSVDWRKKGNFVSPVKNQGGCGSCWT 131

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GKL+  ++ QLV+CA+  +  G
Sbjct: 132 FSTTG-----------------------ALESAVAIASGKLLSLAEQQLVDCAQNFNNHG 168

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPYK  +G+   C +  +K   F  KD   +  N  
Sbjct: 169 CQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDGD---CKFQPNKAIAFV-KDVANITLNDE 224

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           + M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 225 KAMVEAVALYNPVSFAF--EVTEDFMMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYG 277

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 278 EENGIPYWIVKNSWGPHWGMNGYFLIERGKNMCGLAACASY 318


>gi|297793593|ref|XP_002864681.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310516|gb|EFH40940.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 151/331 (45%), Gaps = 59/331 (17%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           TF  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  TFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKLTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGAYNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C+G     + EY     GL++E+ YPY   +G    C +    V +       +     +
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEEAYPYIGKDG---TCKFSAENVGVQVLDSVNITLGAED 261

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQD 348
            +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGYG +D
Sbjct: 262 ELKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVED 316

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
            +PYWL++NSWG    D+G+FK+E G N CG
Sbjct: 317 GVPYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|357473427|ref|XP_003606998.1| Cysteine proteinase [Medicago truncatula]
 gi|355508053|gb|AES89195.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPEEILCK 119
           F  F  K G+ Y++ +E   RF+ FK + +  K+H+       +G + FSD +P E    
Sbjct: 48  FNLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPRE---- 103

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +   ++     ++  +    +P  +DWR+K       +Q +CGSCW+F
Sbjct: 104 --FRKSVLGLRGVGLPKDANAAPILPTDN---LPKDFDWREKGAVTAVKNQGSCGSCWSF 158

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TGKLV  S+ QLV+C  +C     
Sbjct: 159 STTG-----------------------ALEGAHFLSTGKLVSLSEQQLVDCDHECDPEQP 195

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               +GC+G     + EY  ++G +  E+DYPY     ++  C +DK K+        + 
Sbjct: 196 GSCDAGCNGGLMNSAFEYILKSGGVMREEDYPYSGT--DRGSCKFDKKKIAASVANFSVV 253

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL++ LN+  +  Y G           PY     L H VLLVGYG
Sbjct: 254 SLDEDQIAANLVKNGPLAIALNAVYMQTYVGG-------VSCPYICSKRLDHGVLLVGYG 306

Query: 346 -------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                  +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 307 SGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNICGVDSM 351


>gi|268581031|ref|XP_002645498.1| Hypothetical protein CBG22748 [Caenorhabditis briggsae]
          Length = 379

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 168/381 (44%), Gaps = 73/381 (19%)

Query: 17  LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRG 76
           +I AVFL+  + S   L  +  R T     R + L                F  F+ K  
Sbjct: 45  VILAVFLIFVLFSSCALREMGKRKT--ATQRYEVL----------------FDEFLYKFN 86

Query: 77  RQYANDEEIKERFEYFK------QDGHKKHE--RYGTSEFSDRSPEEILCKTGFKWSERT 128
           R Y++ EE K R+  F       ++  +KH    +  +EF+D             WSE  
Sbjct: 87  RLYSSQEEYKYRYHIFVHNVREFEEEERKHPGLDFDINEFTD-------------WSEEE 133

Query: 129 YERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWAFSI 181
             +++ D++ V++    V  +G V       P + DWR +    P  +Q  CGSCWAF+ 
Sbjct: 134 LRKMIVDKKNVKEEKNAVRFEGSVLSSGIKRPASIDWRDQGKLTPIKNQGQCGSCWAFAT 193

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 241
                                     +E Q+AIK G LV  S+ ++V+C  + +GC G +
Sbjct: 194 VA-----------------------AIEAQHAIKKGILVSLSEQEMVDCDGRNNGCSGGY 230

Query: 242 FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILY 301
              ++ +  + GLE+EK YPY     ++  C   ++  K++     +     E +   + 
Sbjct: 231 RPYAMRFVKENGLETEKSYPYSALKHDQ--CMLHQNDTKVYIDDYRMLSTSEENIADWVG 288

Query: 302 KYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSW 359
             GP++  +N    ++ Y       + E C+   +G HA+ +VGYG +    YW+V+NSW
Sbjct: 289 TKGPVTFGMNVVKAMYSYRSGIFNPSAEDCAEKSMGAHALTIVGYGGEGTSAYWIVKNSW 348

Query: 360 GPIGPDEGFFKIERGNNACGI 380
           G     +G+F++ RG N+CG+
Sbjct: 349 GTSWGSDGYFRLARGVNSCGL 369


>gi|23577865|ref|NP_703114.1| viral cathepsin [Rachiplusia ou MNPV]
 gi|37077115|sp|Q8B9D5.1|CATV_NPVR1 RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|23476510|gb|AAN28057.1| viral cathepsin [Rachiplusia ou MNPV]
          Length = 323

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 51/334 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 119
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIIIKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           +                           LE Q+AIK  +L+  S+ Q+++C    +GC+G
Sbjct: 140 ATLAS-----------------------LESQFAIKHNQLINLSEQQMIDCDFVDAGCNG 176

Query: 240 CFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETM 296
                + E      G++ E DYPY+  N     C  + +K  L   KD   +     E +
Sbjct: 177 GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNTNKF-LVQVKDCYRYITVYEEKL 232

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW  +
Sbjct: 233 KDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFK 288

Query: 357 NSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           N+WG    +EGFF++++  NACG+  ++A  A I
Sbjct: 289 NTWGTDWGEEGFFRVQQNINACGMRNELASTAVI 322


>gi|61372279|gb|AAX43816.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|242045644|ref|XP_002460693.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
 gi|241924070|gb|EER97214.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
          Length = 373

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 163/397 (41%), Gaps = 82/397 (20%)

Query: 35  SLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK- 93
           S  D    QV     + A  G+L    E     F AF+ + GR+Y+  EE   R   F  
Sbjct: 19  STDDGFIRQVTDGRRSRAGAGALGLLPE---AQFAAFVRRHGRRYSGPEEYARRLRVFAA 75

Query: 94  -------QDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLME 145
                          R+G + FSD + EE   + TG +               V++++M 
Sbjct: 76  NLARAAAHQALDPTARHGVTPFSDLTREEFEARLTGVR---------AGAGGDVQRLVMS 126

Query: 146 VEKDGP---------VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHI 196
                P         +P ++DWR K        Q ACGSCWAFS  G             
Sbjct: 127 GAPAAPPASQEEVSRLPASFDWRDKGAVTGVKMQGACGSCWAFSTTGA------------ 174

Query: 197 DQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS---------GCDGCFFEPSIE 247
                      +EG   + TGKL+E S+ QLV+C   CS         GC G     +  
Sbjct: 175 -----------VEGANFLATGKLLELSEQQLVDCDHTCSAVAQNECNNGCAGGLMTNAYA 223

Query: 248 YTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGP 305
           Y  ++G L  ++ YPY  A G    C +D +K  +          G E  ++  L + GP
Sbjct: 224 YLMKSGGLMEQRAYPYTGAPG---PCRFDPAKAAVRVANFTAVPAGDEAQIRAALVRRGP 280

Query: 306 LSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-------PYWLV 355
           L+V LN+  +  Y G    P+      C    + H VLLVGYG +          PYW++
Sbjct: 281 LAVGLNAAFMQTYVGGVSCPL-----LCPRAWVNHGVLLVGYGARGFAALRLGYRPYWII 335

Query: 356 RNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 392
           +NSWG    ++G++++ RG+N CG++ +     +  V
Sbjct: 336 KNSWGERWGEQGYYRLCRGSNVCGVDSMVSAVAVAPV 372


>gi|332252750|ref|XP_003275518.1| PREDICTED: pro-cathepsin H [Nomascus leucogenys]
          Length = 335

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 153/341 (44%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHHKTYST-EEYHHRLQMFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFRPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 237 EAMVEAVALYNPVSFAF--EVTQDFMMYRRGIYSSTSCHK-----TPDKVNHAVLAVGYG 289

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 290 EKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|16506815|gb|AAL23962.1|AF426248_1 truncated cathepsin H [Homo sapiens]
          Length = 323

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 153/341 (44%), Gaps = 67/341 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 23  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 79

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 80  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 131

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 132 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNYG 168

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 169 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 224

Query: 294 ETMKKILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           E M + +  Y P+S     ++  D        Y+ T   K     +P  + HAVL VGYG
Sbjct: 225 EAMVEAVALYNPVSFAF--EVTQDFMMYRTGIYSSTSCHK-----TPDKVNHAVLAVGYG 277

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           +++ IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 278 EKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 318


>gi|387915132|gb|AFK11175.1| cathspsin H [Callorhinchus milii]
          Length = 330

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 150/337 (44%), Gaps = 57/337 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILC 118
           +FK ++ +  + Y++ EE   R   F Q+  K  E        R G ++FSD +  E   
Sbjct: 29  SFKTWMTQHNKHYSS-EEYSYRLRTFIQNKRKVEEHNSGRHSYRMGLNQFSDMTFSE--- 84

Query: 119 KTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 175
              FK  +  R  +   A R         V   GP PD  DWR K N   P  +Q  CGS
Sbjct: 85  ---FKKLYLLREPQNCSATRGN------HVLSMGPYPDFVDWRTKGNYVTPVKNQGGCGS 135

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK--Q 233
           CW FS  G                        LE   AIKTGKL+  ++ QLV+CA   +
Sbjct: 136 CWTFSTTG-----------------------CLESAIAIKTGKLLSLAEQQLVDCAGAYK 172

Query: 234 CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--DFLHF 290
             GC+G     + EY  +  GLE+EKDYPY     +   C Y  +K   F  +  +   +
Sbjct: 173 NHGCNGGLPSQAFEYIKYNGGLEAEKDYPY---TAQDQHCQYQPNKAVAFVKEVVNITQY 229

Query: 291 NGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
           + +  +  +  +  P+S+    +D    Y G     ++   +P  + HAVL VGYG Q+ 
Sbjct: 230 DENGIVDAVA-RLNPVSIAFEVTDDFFQYEGGVYSNSNCDSTPDKVNHAVLAVGYGVQNG 288

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
             YW+V+NSWGP     G+F I RG N CG+     Y
Sbjct: 289 TKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAACPSY 325


>gi|60827884|gb|AAX36817.1| cathepsin H [synthetic construct]
          Length = 336

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|417399160|gb|JAA46608.1| Putative pro-cathepsin h [Desmodus rotundus]
          Length = 336

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 153/344 (44%), Gaps = 63/344 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ +  + Y+  EE + R + F  +  K  E        + G + FSD +  E   K
Sbjct: 36  FKSWMEQHQKTYS-AEEYRHRLQTFASNQRKIKEHNARNHTFKMGINPFSDMTFAEF--K 92

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK     P  +Q  CGSCW 
Sbjct: 93  RRYLWSEP--QNCSATKSNY------LRGHGPYPTSVDWRKKGRFVSPVKNQGGCGSCWT 144

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AIKTGK++  S+ QLV+CA+  +  G
Sbjct: 145 FSTTG-----------------------ALESAIAIKTGKMLSLSEQQLVDCAQNFNNHG 181

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPY+   G+   C +   K   F  KD   +  N  
Sbjct: 182 CQGGLPSQAFEYIRYNKGIMEEDSYPYE---GKDSNCRFQPEKAIAFV-KDVANITLNDE 237

Query: 294 ETMKKILYKYGPLSVL--LNSDLI----HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
             M + +  Y P+S    + SD +      Y+ T   K     +P  + HAVL VGYG+Q
Sbjct: 238 AAMVEAVALYNPVSFAFEVTSDFMLYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEQ 292

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           +  PYW+V+NSWGP     G+F IERG N CG+   A Y    V
Sbjct: 293 NGKPYWIVKNSWGPYWGMNGYFLIERGTNMCGLAACASYPIPQV 336


>gi|343476708|emb|CCD12273.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 363

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 49/341 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  PDA DWRKK    P  D+  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVTVST-GKAPDAVDWRKKGAVTPVRDERLC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ +   +L   S+  L+ C  +
Sbjct: 148 DSSWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLLSCDTR 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC G   + + ++   +++  + +E+ YPY + +G+  +C  +KS KV      D++ 
Sbjct: 185 EDGCGGGLMDRAFQWIVSSNKGNVFTEQSYPYASTDGDVPRC--NKSGKVVGAKISDYVD 242

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               E  + + L K GP+++ + +  +  Y G  +     +C    L H VLLVGY    
Sbjct: 243 LPQDENAIAEWLAKNGPVAIAVEATSLQRYTGGVL----TSCISEQLDHGVLLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
             PYW+++NSWG    +EG+ +IE+G N C ++  A  A +
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLMKNYASSAVV 339


>gi|145334857|ref|NP_001078774.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009932|gb|AED97315.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 361

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 154/330 (46%), Gaps = 57/330 (17%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTG-----------------------ALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY     GL++EK YPY   + E  K + +   V++    + +     + 
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDE 262

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDN 349
           +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGYG +D 
Sbjct: 263 LKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDG 317

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
           +PYWL++NSWG    D+G+FK+E G N CG
Sbjct: 318 VPYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 157/344 (45%), Gaps = 57/344 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER------------YGTSEFSDRSP 113
           + +K F +   + Y   EE   RFE F+++  K  E              G ++FSD   
Sbjct: 54  QAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLKH 113

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE +   G K  + + +            L+E       PD+ DWRKK       +Q  C
Sbjct: 114 EEFVKYNGLK--KTSLKDGGCSSYLAANNLVE-------PDSVDWRKKGYVTDVKNQGQC 164

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCW+FS  G                        LEGQ+  K+GKLV  S+SQLV+C++ 
Sbjct: 165 GSCWSFSTTGS-----------------------LEGQHFRKSGKLVSLSESQLVDCSQS 201

Query: 234 CS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
               GC+G   + + +Y     GLESE+DYPYK   G    C +D +KV           
Sbjct: 202 FGNEGCNGGLMDNAFKYIKSVGGLESEEDYPYKPKQG---TCKFDDTKVAATDTGCVDVE 258

Query: 291 NGSET-MKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +GSE+ +KK + + GP+SV +++       Y G     ++  CS   L H VL VGYG  
Sbjct: 259 SGSESALKKAVSEVGPVSVAIDASHSSFQSYAGGVY--DEPECSSEQLDHGVLCVGYGTD 316

Query: 348 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           D    YW+V+NSWG    ++G+ K+ R   N CGI   A Y  +
Sbjct: 317 DQGQDYWIVKNSWGAEWGEDGYVKMSRNKKNQCGIATQASYPLV 360


>gi|449452572|ref|XP_004144033.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
 gi|449500499|ref|XP_004161114.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
          Length = 356

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 143/335 (42%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCK 119
           F  F  + G++Y   EE+K RF  F +        +K+   Y  G ++F+D + EE    
Sbjct: 57  FARFAHRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEF--- 113

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R +    A              D  +P++ DWRK  +  P  DQ  CGSCW F
Sbjct: 114 -------RKHRLGAAQNCSATTKGSHKLTDTALPESKDWRKDGIVSPVKDQGHCGSCWTF 166

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  YA   GK +  S+ QLV+C +  +  GC
Sbjct: 167 STTGA-----------------------LEAAYAQAHGKGISLSEQQLVDCGRGFNNFGC 203

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSET 295
           +G     + EY  +  GL++E+ YPY   +G    C +    V +       +     + 
Sbjct: 204 NGGLPSQAFEYIKYNGGLDTEEAYPYTGVDGS---CKFVPENVGVQVIDSVNITLGAEDE 260

Query: 296 MKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV          Y+      N    +P D+ HAVL VGYG +D IPYWL
Sbjct: 261 LKHAVAFVRPVSVAFEVVSGFRLYSKGVYTSNSCGSTPMDVNHAVLAVGYGVEDGIPYWL 320

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 321 IKNSWGGNWGDNGYFKMEMGKNMCGVATCASYPIV 355


>gi|449270628|gb|EMC81287.1| Cathepsin H, partial [Columba livia]
          Length = 261

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 123/254 (48%), Gaps = 36/254 (14%)

Query: 146 VEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
           +   GP PD+ DWRKK N   P  +Q  CGSCW FS  G                     
Sbjct: 36  LRSSGPYPDSIDWRKKGNYVTPVKNQGPCGSCWTFSTTG--------------------- 74

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYP 261
              LE   AI TGKL+  ++ QLV+CA+  +  GC G     + EY  +  GL  E  YP
Sbjct: 75  --CLESAIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQAFEYILYNRGLMGEDTYP 132

Query: 262 YKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHD 317
           Y+  NG    C +   K   F  +D ++      + M + + K+ P+S    + S+ +H 
Sbjct: 133 YRAENG---TCKFQPEKAIAFV-RDVINITQYDEDGMVEAVGKHNPVSFAFEVTSNFMHY 188

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 377
             G       E  +P  + HAVL VGYG++D  P+W+V+NSWGP+   +G+F IERG N 
Sbjct: 189 RKGVYSNPRCEH-TPDKVNHAVLAVGYGEEDGTPFWIVKNSWGPLWGMDGYFLIERGKNM 247

Query: 378 CGIEQIAGYATIDV 391
           CG+   A Y    V
Sbjct: 248 CGLAACASYPVPQV 261


>gi|71482942|gb|AAZ32410.1| cysteine proteinase aleuran type [Nicotiana benthamiana]
          Length = 360

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 145/335 (43%), Gaps = 49/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILCK 119
           F  F  + G++Y   EEIK+RFE F  +      H K     + G +EF+D         
Sbjct: 61  FARFAHRYGKRYETVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD--------- 111

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSCWA 178
               W E   +R+ A +         ++    V P+  DWR+  +  P  +Q  CGSCW 
Sbjct: 112 --ITWDEFRRDRLGAAQNCSATTKGNLKLTNVVLPETKDWREAGIVSPVKNQGKCGSCWT 169

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 170 FSTTGA-----------------------LEAAYGQAFGKGISLSEQQLVDCAGAFNNFG 206

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY     GL++E+ YPY   NG   K + +   VK+    + +     + 
Sbjct: 207 CNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDE 264

Query: 296 MKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+S+          Y        +   +P D+ HAVL VGYG ++ +PYWL
Sbjct: 265 LKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGVPYWL 324

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 325 IKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|16506813|gb|AAL23961.1|AF426247_1 cathepsin H [Homo sapiens]
          Length = 335

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNYG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|359492179|ref|XP_002280808.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|302142580|emb|CBI19783.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 159/386 (41%), Gaps = 79/386 (20%)

Query: 26  GVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEI 85
           G  S +    L D +  QVV+  D L     L+ ++      F AF  +  + YA  EE 
Sbjct: 20  GAMSDVSSNELDDLLIRQVVSNSDDL-----LSAEHH-----FAAFKARFRKTYATAEEH 69

Query: 86  KERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE 137
             RF  FK +  +            +G + FSD +P E           + Y  +   R 
Sbjct: 70  DYRFSIFKANLRRAKRNQLLDPSAVHGVTRFSDLTPAEF---------RQNYLGLKPLRF 120

Query: 138 KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHID 197
            ++     +     +P  +DWR         DQ  CGSCW+FS  G              
Sbjct: 121 PIDTQQAPILPTNDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGA------------- 167

Query: 198 QFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS---------GCDGCFFEPSIEY 248
                     LEG + + TG LV  S+ QLV+C  +C          GC+G     + EY
Sbjct: 168 ----------LEGAHFLATGNLVSLSEQQLVDCDHECDPEEYGACDRGCNGGLMNTAFEY 217

Query: 249 THQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS 307
             +AG +   +DYPY   +G    C +DK+K+              + +   L K GPL+
Sbjct: 218 ILKAGGVVRGEDYPYTGTDGH---CKFDKTKIAASVSNFSTVSIDEDQIAANLVKNGPLA 274

Query: 308 VLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ-------DNIPYWLVRN 357
           V +N+  +  Y G    P       CS   L H VLLVGYG            PYWL++N
Sbjct: 275 VGINAIFMQSYAGGVSCPF-----ICST-SLNHGVLLVGYGSAGYSPIRFKEKPYWLLKN 328

Query: 358 SWGPIGPDEGFFKIERGNNACGIEQI 383
           SWG    + G++KI RG+N CG++ +
Sbjct: 329 SWGQNWGEHGYYKICRGHNICGVDSM 354


>gi|146215994|gb|ABQ10199.1| cysteine protease Cp1 [Actinidia deliciosa]
          Length = 358

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 153/352 (43%), Gaps = 60/352 (17%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSE 107
           S+  D+ + L +F  F  + G++Y   EE K RF  F ++       +KK   Y  G + 
Sbjct: 48  SVLGDSRHAL-SFARFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNH 106

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           F+D + EE      F+       +  +   K    L E      +P+  DWR   +  P 
Sbjct: 107 FADWTWEE------FRRHRLGAAQNCSATTKGNHKLTEE----ALPEMKDWRVSGIVSPV 156

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCW FS  G                        LE  Y    GK +  S+ QL
Sbjct: 157 KDQGHCGSCWTFSTTGA-----------------------LEAAYKQAFGKGISLSEQQL 193

Query: 228 VECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
           V+CA   +  GC G     + EY  +  GL++E+ YPY   NGE   C +    V +   
Sbjct: 194 VDCAGAFNNFGCSGGLPSQAFEYVKYNGGLDTEEAYPYTGKNGE---CKFSSENVGVQVL 250

Query: 285 KDF-LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETC--SPYDLGH 337
               +     + +K  +    P+SV          NG  + K      +TC  +P D+ H
Sbjct: 251 DSVNITLGAEDELKHAVAFVRPVSVAFQV-----VNGFRLYKEGVYTSDTCGRTPMDVNH 305

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           AVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CG+   A Y  I
Sbjct: 306 AVLAVGYGVENGVPYWLIKNSWGADWGDSGYFKMEMGKNMCGVATCASYPVI 357


>gi|1149525|emb|CAA64218.1| preprocathepsin K [Mus musculus]
          Length = 329

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG         RI   R      L   E +G VPD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGL--------RIPPSRSYSNDTLYTPEWEGRVPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS A                       G LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSA-----------------------GALEGQLKKKTGKLLALSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  Q  G++SE  +PY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVTENYGCGGGYMTTAFQYVQQNGGIDSEDAFPYV---GQDESCMYNATAKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+V
Sbjct: 222 RGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFPKM 329


>gi|29710|emb|CAA34734.1| unnamed protein product [Homo sapiens]
          Length = 335

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNYG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|114658412|ref|XP_001153217.1| PREDICTED: pro-cathepsin H isoform 6 [Pan troglodytes]
 gi|397478882|ref|XP_003810764.1| PREDICTED: pro-cathepsin H [Pan paniscus]
 gi|12803323|gb|AAH02479.1| Cathepsin H [Homo sapiens]
 gi|60655259|gb|AAX32193.1| cathepsin H [synthetic construct]
 gi|123979560|gb|ABM81609.1| cathepsin H [synthetic construct]
 gi|123994193|gb|ABM84698.1| cathepsin H [synthetic construct]
 gi|189054474|dbj|BAG37247.1| unnamed protein product [Homo sapiens]
 gi|410254318|gb|JAA15126.1| cathepsin H [Pan troglodytes]
 gi|410294916|gb|JAA26058.1| cathepsin H [Pan troglodytes]
 gi|410331109|gb|JAA34501.1| cathepsin H [Pan troglodytes]
          Length = 335

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|1594287|gb|AAC48340.1| cathepsin L-like cysteine proteinase [Toxocara canis]
          Length = 360

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 170/358 (47%), Gaps = 50/358 (13%)

Query: 44  VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 99
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEEFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 100 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 148
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E +L   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKSTFIDSFIDPPETVLARREE 144

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
              +PD +DWR  NV  P   Q  CGSCWAF+  G                        +
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCWAFATVG-----------------------TV 178

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE 268
           E  YA+ TG+L   S+ QL++C  + + CDG   + ++ Y +  GL  E DYPY     +
Sbjct: 179 ESAYALGTGELRSLSEQQLLDCNLENNACDGGDVDKALRYVYDEGLMREYDYPYVAHRQD 238

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKND 327
             +   + +++K      FLH + +  +  +L+ YGP++V +N    +  Y G     + 
Sbjct: 239 TCQLRGETTRIKAAV---FLHQDEASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDK 294

Query: 328 ETCSPYDLG-HAVLLVGYGKQD--NIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 381
             C    +G H++ +VGYG  +  N  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 295 WECENKIIGTHSINIVGYGTWNATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352


>gi|23110955|ref|NP_004381.2| pro-cathepsin H preproprotein [Homo sapiens]
 gi|288558851|sp|P09668.4|CATH_HUMAN RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|119619549|gb|EAW99143.1| cathepsin H [Homo sapiens]
          Length = 335

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK+++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|359492709|ref|XP_002280798.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|147841854|emb|CAN73591.1| hypothetical protein VITISV_022889 [Vitis vinifera]
 gi|302142582|emb|CBI19785.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 160/356 (44%), Gaps = 73/356 (20%)

Query: 60  DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHE------RYGTSEF 108
           D +++L     F  F  K G+ YA  EE   RF  FK +    K+H+       +G ++F
Sbjct: 45  DGDDLLNAEYQFAEFKTKFGKTYATAEEHDHRFNVFKANLRRAKRHQLLDPSAEHGVTQF 104

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
           SD +P E      F+ +    +R+    +  +  ++  +    +P  +DWR         
Sbjct: 105 SDLTPRE------FRQNYLGLKRLQLPADAQKAPILPTKD---LPTDFDWRDHGAVTAVK 155

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           DQ  CGSCW+FS  G                        LEG + + TG LV  S  QL+
Sbjct: 156 DQGYCGSCWSFSTIG-----------------------ALEGAHFLATGNLVSLSTQQLL 192

Query: 229 ECAKQCS---------GCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSK 278
           +C  +C          GC+G     + EY  +AG +  E+DYPY     ++  C ++K+K
Sbjct: 193 DCDTECDPEEYDACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYTGT--DRGLCRFNKTK 250

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----D 334
           +        +     + +   L K GPL+V +N+  +  Y      K+  +C PY     
Sbjct: 251 IAASVANFSVVSLDEDQIAANLVKNGPLAVGINAVFMQTY------KSGVSC-PYICSST 303

Query: 335 LGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           L H VLLVGYG            PYW+++NSWG    ++G++KI RG+N CG++ +
Sbjct: 304 LDHGVLLVGYGSAGYSPIRFKEKPYWIIKNSWGESWGEQGYYKICRGHNICGVDSM 359


>gi|13491752|gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
          Length = 366

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 155/350 (44%), Gaps = 69/350 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F  F  + G+ YA+DEE   R   FK +    K+H+       +G ++FSD +P 
Sbjct: 44  NADHHFTVFKRRFGKVYASDEEHDYRLSEFKANMRRAKQHQELDPAAVHGVTQFSDLTPT 103

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   +  F    R   +  AD  K   +L   E    +P  +DWR      P  +Q  CG
Sbjct: 104 EF--RRKFLGLNRRL-KFPAD-AKTAPILPTDE----LPSDFDWRDHGAVTPVKNQGTCG 155

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SC +FS  G                        LEG   + TGKLV  S+ QLV+C  +C
Sbjct: 156 SCCSFSTTGA-----------------------LEGANFLATGKLVSLSEQQLVDCDHEC 192

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EYT +AG L  E+D+PY   + +   C +DK+K+     
Sbjct: 193 DPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDHPYTGNDLQV--CRFDKTKIAAKVA 250

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H VL
Sbjct: 251 NFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG-------VSCPYICSKRLDHGVL 303

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG       +    PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 LVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 353


>gi|356541074|ref|XP_003539008.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 363

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 72/346 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F  + G+ YA+ EE   RFE FK +  +  +H+       +G + FSD +  E   K
Sbjct: 48  FLDFKRRFGKAYASQEEHNYRFEVFKANMRRARRHQSLDPSAAHGVTRFSDLTASEFRNK 107

Query: 120 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
             G +       R+ ++  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 108 VLGLRGV-----RLPSNANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 157

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 234
           FS  G                        LEG + + TG+LV  S+ QLV+C  +C    
Sbjct: 158 FSTTGA-----------------------LEGAHFLSTGELVSLSEQQLVDCDHECDPEE 194

Query: 235 -----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                SGC+G     + EY  ++G +  E+DYPY     ++  C +DK+K+        +
Sbjct: 195 AGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGT--DRGNCKFDKAKIAASVANFSV 252

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 344
                + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGY
Sbjct: 253 ISLDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYICSRRLDHGVLLVGY 305

Query: 345 G-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G       +    P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 306 GSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSM 351


>gi|18407961|ref|NP_566880.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|73622182|sp|Q8RWQ9.1|ALEUL_ARATH RecName: Full=Thiol protease aleurain-like; Flags: Precursor
 gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70 [Arabidopsis thaliana]
 gi|332644500|gb|AEE78021.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 358

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 53/338 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 118
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGTFNNFG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  GL++E+ YPY   +G    C +    + +       +     +
Sbjct: 205 CHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAED 261

Query: 295 TMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGYG +D++P
Sbjct: 262 ELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVP 319

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 320 YWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVV 357


>gi|289741839|gb|ADD19667.1| cysteine proteinase cathepsin L [Glossina morsitans morsitans]
          Length = 365

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 157/342 (45%), Gaps = 52/342 (15%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--------HERY--GTSEFSDRSPE 114
           ++ F  F+ + G+ YA   E   R   F  + HK         H  Y    + F+D + E
Sbjct: 59  VKDFSDFVQQTGKSYATTAERTLREGVF--NAHKALVEAENQLHAGYELALNAFADLTKE 116

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E L +          E  V +R    ++ +++     +PD++DWR+     P   Q  CG
Sbjct: 117 EFLSQLTGNHKSPQAEAKVKNR----RLALKLNTTAKLPDSFDWREHGAVTPVKFQGKCG 172

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAF++ G                        LEG    K+GKL+  S+  LV+C ++ 
Sbjct: 173 SCWAFAVTG-----------------------ALEGHSFRKSGKLINLSEQNLVDCGEKA 209

Query: 235 ---SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
               GCDG + E   E+ + Q G+     Y Y +   +K  C+Y K+ K     G   + 
Sbjct: 210 YGLDGCDGGYQEYGFEFISRQNGVAHGAKYLYVD---KKNTCSYRKTFKAAELKGFSVIP 266

Query: 290 FNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
            N  ETMKK++   GPL+  +N+   L+    G      DE C+  +  H+VL+VGYG +
Sbjct: 267 PNDEETMKKVVATLGPLACSINALETLLLYKKGIYA---DEECNKDEPNHSVLVVGYGTE 323

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           D+  YW+V+NSW  +  +EG+F++ RG N C I     Y  +
Sbjct: 324 DDQDYWIVKNSWDNVWGEEGYFRLPRGKNFCKIASECSYPVL 365


>gi|194741252|ref|XP_001953103.1| GF17600 [Drosophila ananassae]
 gi|190626162|gb|EDV41686.1| GF17600 [Drosophila ananassae]
          Length = 333

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 166/363 (45%), Gaps = 66/363 (18%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSD 110
           LAI  ++ +  + + E + AF ++  + Y ++ E + RF+ F          Y     + 
Sbjct: 13  LAIAHAVPYAQDILEEEWMAFKLEYNKVYQDETEEQLRFKIF---------NYNKLLIAR 63

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG----------PV----PDAW 156
            + +    K  F  +   +  ++ D E  + ML ++   G          PV    PDA 
Sbjct: 64  HNLKWAAGKVSFNLAVNKFADLL-DHEFQDLMLGKMSPSGSNFGSSTFLPPVNLTLPDAV 122

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWRK     P  DQ +CGSCWAFS  G                        LEGQ+  KT
Sbjct: 123 DWRKYGFVTPVKDQGSCGSCWAFSTTGS-----------------------LEGQHFRKT 159

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD 275
           G+L+  S+  L++C+   +GC     E +  Y     G+++E  YPY+ A  +   C + 
Sbjct: 160 GQLISLSEQNLIDCSPGNNGCKNGAVEYAFRYIQSNKGIDTEISYPYEAAQNQ---CRFR 216

Query: 276 KSKVKLFTGKDFLHFNGSETMK--KILYKYGPLSVLLNSDL-----IHDYNGTPIRKNDE 328
           +  +   T   F+  N  + M+  + +   GP+SVL+NS L      HD  G     ND 
Sbjct: 217 RDTIGA-TSTGFVKLNPGDEMELAQAVATVGPISVLINSSLDSFKFYHD--GV---YNDP 270

Query: 329 TCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGY 386
           +C+P  L HAVL+VGYG  D    +WLV+NSW     ++G+ KI+R  NN CGI   A Y
Sbjct: 271 SCNPNKLTHAVLVVGYGTDDRGGDFWLVKNSWSTHWGEQGYVKIKRNANNLCGIASNALY 330

Query: 387 ATI 389
             +
Sbjct: 331 PLV 333


>gi|79331505|ref|NP_001032106.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009931|gb|AED97314.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 357

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 58/340 (17%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILC 118
           +F  F  + G++Y N EE+K RF  FK++       +KK   Y  G ++F+D + +E   
Sbjct: 58  SFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
           +T    ++     +    +  E  L         P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 117 RTKLGAAQNCSATLKGSHKVTEAAL---------PETKDWREDGIVSPVKDQGGCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTG-----------------------ALEAAYHQAFGKGISLSEQQLVDCAGAFNNYG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G     + EY     GL++EK YPY   + E  K + +   V++    + +     + 
Sbjct: 205 CNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVN-ITLGAEDE 262

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYGKQDN 349
           +K  +    P+S+    ++IH +    + K+    D  C  +P D+ HAVL VGYG +D 
Sbjct: 263 LKHAVGLVRPVSIAF--EVIHSFR---LYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDG 317

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +PYWL++NSWG    D+G+FK+E G N C I   A Y  +
Sbjct: 318 VPYWLIKNSWGADWGDKGYFKMEMGKNMC-IATCASYPVV 356


>gi|288804650|ref|YP_003429335.1| cathepsin [Pieris rapae granulovirus]
 gi|270161225|gb|ACZ63497.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 159/337 (47%), Gaps = 43/337 (12%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 107
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K+  +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKYAVFDINA 83

Query: 108 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  +Q  CGSCWAFS                           +E  Y IK  K ++ S+ 
Sbjct: 144 PVKNQLECGSCWAFSAIAN-----------------------IESLYNIKHNKELDLSEQ 180

Query: 226 QLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
            L+ C    +GC G     ++E    Q G+ SEKD PY    G    C   +  V + +G
Sbjct: 181 HLINCDSINNGCGGGLMHWALETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SG 236

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVG 343
                      ++++L   GP+S+ ++   + DY         + C   + L HAVLLVG
Sbjct: 237 CTRYVLKNENKLRELLIANGPISMAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVG 292

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG  +NIPYW+++NSWG    ++G+ +++R  N+CG+
Sbjct: 293 YGVHNNIPYWIMKNSWGEEWGEKGYLRVQRNINSCGL 329


>gi|56755191|gb|AAW25775.1| SJCHGC00511 protein [Schistosoma japonicum]
          Length = 454

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 153/343 (44%), Gaps = 55/343 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 112
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 151 ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 209

Query: 113 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            +E   +T     W   +    ++ R +V          G +P+ +DWR+K       +Q
Sbjct: 210 TDE-FSRTHLTAPWRASSKRNTISPRREV----------GDIPNNFDWREKGAVTEVKNQ 258

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C
Sbjct: 259 GMCGSCWAFSTTGN-----------------------IESQWFRKTGKLLSLSEQQLVDC 295

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                GC+G    PS  Y       GL  E +YPY   N    KC    + V  +     
Sbjct: 296 DSLDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVANVAAYINSSV 350

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-K 346
                   +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  
Sbjct: 351 NLTQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVS 410

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           + N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 411 EKNEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTDATSALI 453


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 61/367 (16%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----- 98
           ++  V  +A+  +  F N N  E ++ F V  G+ Y N  E   R + F  +  +     
Sbjct: 4   LLVAVAVIAVSCANRFYNIN-PEEWETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEAHN 62

Query: 99  -KHERYGTS------EFSDRSPEEI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            K+E+   S       F D    EI     GFK +  T         K E  +     D 
Sbjct: 63  AKYEQGEVSYKMKMNHFGDLMSHEIKALMNGFKMTPNT---------KREGKIYFPSND- 112

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
            +P + DWR+K    P  DQ  CGSCW+FS  G                        LEG
Sbjct: 113 KLPKSVDWRQKGAVTPVKDQGQCGSCWSFSATGS-----------------------LEG 149

Query: 211 QYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANG 267
           Q  +K GKLV  S+  L++C+K+   +GC+G   + + +Y +   G+++E  YPY+    
Sbjct: 150 QIFLKKGKLVSLSEQNLMDCSKEYGNNGCEGGLMDKAFQYVSDNKGIDTESSYPYE---A 206

Query: 268 EKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPI 323
             + C + K KV   T K ++    G E  ++  L   GP+SV +++  +  H Y+    
Sbjct: 207 RDYACRFKKDKVG-GTDKGYVDIPEGDEKALQNALATVGPISVAIDASHESFHFYSEGVY 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQ 382
             N+  CS YDL H VL VGYG ++   YWLV+NSWGP   + G+ KI R + N CGI  
Sbjct: 266 --NEPYCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGESGYIKIARNHSNHCGIAS 323

Query: 383 IAGYATI 389
           +A Y  +
Sbjct: 324 MASYPIV 330


>gi|91085677|ref|XP_971867.1| PREDICTED: similar to cathepsin L-like protein; cysteine proteinase
           [Tribolium castaneum]
 gi|270011032|gb|EFA07480.1| cathepsin L precursor [Tribolium castaneum]
          Length = 329

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 160/345 (46%), Gaps = 47/345 (13%)

Query: 58  TFDNENILETFKAFIVKRGRQYANDEE---IKERFEYFKQDGHKKHERY---------GT 105
           T D  ++ E ++ F  K GR +   +E    K  F+   Q+    +ERY         G 
Sbjct: 13  TSDASSLNEKWENFKQKHGRNFLFSKEEFFRKSLFQKKLQEIEDHNERYRKGLETYEMGI 72

Query: 106 SEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           ++FSD + +E+   T G +      E I+   +      + + + G +P ++DWR + V 
Sbjct: 73  NKFSDYTDDELFSYTHGLQLPSELPEPII---KISPNATLSLSRAG-LPSSFDWRSRGVI 128

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LE  Y I+ G +V  S+
Sbjct: 129 TPVKNQRNCGSCWAFSTNG-----------------------ALEAHYKIRRGSVVTLSE 165

Query: 225 SQLVECAKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-F 282
            QLV+C +Q  GC G +   +  Y     G+  +++YPYK + G    C +  SK K+  
Sbjct: 166 QQLVDCVRQAFGCRGGWMTDAYMYIARNGGINLDRNYPYKASAGP---CRFQASKPKVTI 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G  +L     E +K ++   GP+SV +++       G  +  N  +C+     HAV++V
Sbjct: 223 RGYAYLTGPNEEMLKHMVVTQGPVSVAIDASGRFASYGGGVYYN-PSCARNKFTHAVVIV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
           GYG+++   YWLV+NSWG      G+ K+ R  NN CGI   A Y
Sbjct: 282 GYGRENGQDYWLVKNSWGRDWGLGGYIKMARNRNNHCGIASKASY 326


>gi|5679322|gb|AAD46920.1|AF167986_1 putative cysteine proteinase GmPM33 [Glycine max]
          Length = 363

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 172/401 (42%), Gaps = 84/401 (20%)

Query: 14  AIMLIQAVFL-LCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FK 69
           A+M +  V L LC     L L +     T Q +AR   L        DNE +L T   FK
Sbjct: 8   ALMCLARVSLFLCA----LTLSAAHGSTTVQDIARKLKLG-------DNE-LLRTEKKFK 55

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 129
            F+   GR Y+ +EE   R   F Q+  +       +E     P  +   T F       
Sbjct: 56  VFMENYGRSYSTEEEYLRRLGIFAQNMVR------AAEHQALDPTAVHGVTQFS------ 103

Query: 130 ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYL 189
             +         +   +E DG +P+ +DWR+K        Q  CGSCWAFS  G      
Sbjct: 104 --LPVSNNAAGGIAPPLEVDG-LPENFDWREKGAVTEVKLQGRCGSCWAFSTTGS----- 155

Query: 190 LQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGC 240
                             +EG   + TGKLV  S  QL++C  +C         +GC+G 
Sbjct: 156 ------------------IEGANFLATGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGG 197

Query: 241 FFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKK 298
               +  Y  ++G LE E  YPY    GE+ +C +D  K+ +    +F +    E  +  
Sbjct: 198 LMTNAYNYLLESGGLEEESSYPY---TGERGECKFDPEKIAVKI-TNFTNIPADENQIAA 253

Query: 299 ILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQD------- 348
            L K GPL++ +N+  +  Y G    P+      CS   L H VLLVGYG +        
Sbjct: 254 YLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKRLNHGVLLVGYGAKGFSILRLG 308

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           N PYW+++NSWG    ++G++K+ RG+  CGI  +   A +
Sbjct: 309 NKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGINTMVSAAMV 349


>gi|9627870|ref|NP_054157.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|114680178|ref|YP_758591.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
 gi|115751|sp|P25783.1|CATV_NPVAC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332491|gb|AAA46752.1| viral cathepsin [Autographa californica nucleopolyhedrovirus]
 gi|559196|gb|AAA66757.1| viral cathepsin-like protein [Autographa californica
           nucleopolyhedrovirus]
 gi|113015253|gb|ABE68510.1| viral cathepsin [Plutella xylostella multiple nucleopolyhedrovirus]
          Length = 323

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 157/334 (47%), Gaps = 51/334 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 119
           F+ F+ +  + Y ++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAF 139

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           +                           LE Q+AIK  +L+  S+ Q+++C    +GC+G
Sbjct: 140 ATLAS-----------------------LESQFAIKHNQLINLSEQQMIDCDFVDAGCNG 176

Query: 240 CFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETM 296
                + E      G++ E DYPY+  N     C  + +K  L   KD   +     E +
Sbjct: 177 GLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LVQVKDCYRYITVYEEKL 232

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           K +L   GP+ + +++  I +Y    I+     C    L HAVLLVGYG ++NIPYW  +
Sbjct: 233 KDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVLLVGYGVENNIPYWTFK 288

Query: 357 NSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 289 NTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|438000427|ref|YP_007250532.1| v-cath protein [Thysanoplusia orichalcea NPV]
 gi|429842964|gb|AGA16276.1| v-cath protein [Thysanoplusia orichalcea NPV]
          Length = 323

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 162/334 (48%), Gaps = 51/334 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYGTSEFSDRSPEEILCK- 119
           F+ F+ +  + Y+++ E   RF+ F+ +             +Y  ++FSD S +E + K 
Sbjct: 28  FEEFVHRFNKNYSSETEKLRRFKIFQHNLNEIINKNQNDSAKYEINKFSDLSKDETIAKY 87

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           TG     +T        +   K+++  +  G  P  +DWR+ N      +Q  CG+CWAF
Sbjct: 88  TGLSLPTQT--------QNFCKVIILDQPPGKGPLDFDWRRLNKVTNVKNQGTCGACWAF 139

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           +                           LE QYAIK  +L+  S+ Q+++C    +GC+G
Sbjct: 140 ATLAS-----------------------LESQYAIKHNQLINLSEQQMIDCDFVDAGCNG 176

Query: 240 CFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETM 296
                + E      G++ E DYPY+ AN    +   +K  V++   KD   +     E +
Sbjct: 177 GLLHTAFEAIIKMGGVQLESDYPYE-ANNNNCRMNGNKFAVRV---KDCYRYVTVYEEKL 232

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           K +L   GP+ + +++  I +Y    IR     C    L HAVLLVGYG ++NIP+W+ +
Sbjct: 233 KDLLRVAGPIPMAIDAADIVNYKQGVIR----YCFNSGLNHAVLLVGYGVENNIPFWIFK 288

Query: 357 NSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           N+WG    ++G+F++++  NACG+  ++A  ATI
Sbjct: 289 NTWGTDWGEDGYFRVQQNINACGMRNELASIATI 322


>gi|397133545|gb|AFO10079.1| V-CATH [Bombyx mandarina nucleopolyhedrovirus S2]
          Length = 323

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 51/350 (14%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERYG 104
           A+  S  +D       F+ F+ +  + Y ++ E   RF+ F+ +             +Y 
Sbjct: 12  AVVKSAAYDLLKAPNYFEEFVHRFNKDYGSEVEKLRRFKIFQHNLNEIINKDQNDSAKYE 71

Query: 105 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
            ++FSD S +E + K TG     +T        +   K+++  +  G  P  +DWR+ N 
Sbjct: 72  INKFSDLSKDETIAKYTGLSLPIQT--------QNFCKVIVLDQPPGKGPLEFDWRRLNK 123

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                +Q  CG+CWAF+                           LE Q+AIK  +L+  S
Sbjct: 124 VTSVKNQGMCGACWAFATLAS-----------------------LESQFAIKHNQLINLS 160

Query: 224 KSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
           + Q+++C    +GC+G     + E      G++ E DYPY+  N     C  + +K  L 
Sbjct: 161 EQQMIDCDFVDAGCNGGLLHTAFEAIIKMGGVQLESDYPYEADNN---NCRMNSNKF-LV 216

Query: 283 TGKDFLHFNG--SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
             KD   +     E +K +L   GP+ + +++  I +Y    I+     C    L HAVL
Sbjct: 217 QVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGIIK----YCFNSGLNHAVL 272

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIE-QIAGYATI 389
           LVGYG ++NIPYW  +N+WG    ++GFF++++  NACG+  ++A  A I
Sbjct: 273 LVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVI 322


>gi|27728675|gb|AAO18731.1| cysteine protease [Gossypium hirsutum]
          Length = 389

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 156/346 (45%), Gaps = 51/346 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFK------------QDGHKKHERYGTSEFS 109
           E +LE F+ +  K  + Y + EE ++RFE FK            +  +K     G ++F+
Sbjct: 43  ERVLEIFQQWKEKHRKVYRHAEEAEKRFENFKGNLKYILERNAKRKANKWEHHVGLNKFA 102

Query: 110 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
           D S EE       K  +   + I   R    K+     +    P + DWR   V     D
Sbjct: 103 DMSNEEFRKAYLSKVKKPINKGITLSRNMRRKV-----QSCDAPSSLDWRNYGVVTAVKD 157

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q +CGSCWAFS  G                        +EG  A+ TG L+  S+ +LVE
Sbjct: 158 QGSCGSCWAFSSTG-----------------------AMEGINALVTGDLISLSEQELVE 194

Query: 230 CAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
           C     GC+G + + + E+  +  G++SE DYPY   +G    C   K + K+ +   + 
Sbjct: 195 CDTSNYGCEGGYMDYAFEWVINNGGIDSESDYPYTGVDG---TCNTTKEETKVVSIDGYQ 251

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS--PYDLGHAVLLVGYGK 346
               S++         P+SV ++   I D+        D +CS  P D+ HAVL+VGYG 
Sbjct: 252 DVEQSDSALLCAVAQQPVSVGIDGSAI-DFQLYTGGIYDGSCSDDPDDIDHAVLIVGYGS 310

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNN----ACGIEQIAGYAT 388
           +D+  YW+V+NSWG     +G+F ++R  +     C +  +A Y T
Sbjct: 311 EDSEEYWIVKNSWGTSWGIDGYFYLKRDTDLPYGVCAVNAMASYPT 356


>gi|33242880|gb|AAQ01144.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 168/361 (46%), Gaps = 46/361 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
           D S V   L   KD    N    +K+ +   GP+SV +++        +    ++  CS 
Sbjct: 215 DNSSVGATLIGYKDVKSSN-EHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCST 273

Query: 333 YDLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 388
             L H VL+VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  
Sbjct: 274 EQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNKNNQCGIATSASYPL 333

Query: 389 I 389
           +
Sbjct: 334 V 334


>gi|426379977|ref|XP_004056662.1| PREDICTED: pro-cathepsin H [Gorilla gorilla gorilla]
          Length = 335

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 153/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F++++ K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FRSWMSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPKWGMNGYFLIERGKNMCGLAACASY 330


>gi|225431287|ref|XP_002275759.1| PREDICTED: cysteine proteinase RD19a isoform 1 [Vitis vinifera]
 gi|297735094|emb|CBI17456.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 151/345 (43%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  K G+ Y+  EE   RF  F+ +  +            +G + FSD +P+E    
Sbjct: 52  FGLFKAKFGKTYSTVEEHDYRFSVFEANLRRARRHQLLDPSAVHGVTRFSDLTPDEF--- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R Y  +   R   +     +     +P  +DWR      P  DQ +CGSCW+F
Sbjct: 109 ------RRDYLGLKPLRLPADAQKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSF 162

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        LEG + + TG L+  S+ QLV+C  +C     
Sbjct: 163 SAIGA-----------------------LEGAHFLTTGNLISMSEQQLVDCDHECDPEEY 199

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
                GC+G     + EY  +AG +E E+ YPY  +  ++  C ++KS++        + 
Sbjct: 200 GACDQGCNGGLMTSAFEYILKAGGVEREETYPYIGS--DRGSCKFNKSQIVASVSNFSVV 257

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   + K GPL+V +N+  +  Y          +C PY    +L H V+LVGYG
Sbjct: 258 SLDEDQIAANMVKNGPLAVGINAVFMQTY------MKGVSC-PYICSRNLDHGVVLVGYG 310

Query: 346 KQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                P       YW+++NSWG    ++G++KI RG+NACG++ +
Sbjct: 311 SAGYAPIRFKEKPYWIIKNSWGESWGEDGYYKICRGHNACGVDSM 355


>gi|297804580|ref|XP_002870174.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316010|gb|EFH46433.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 373

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 153/351 (43%), Gaps = 69/351 (19%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPE 114
           N    F  F  K  + YA  EE   RF  FK +  +            +G ++FSD +P+
Sbjct: 50  NAEHHFSLFKSKYEKTYATQEEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPK 109

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E   +  F   +R   R+  D +        +     +P  +DWR++    P  +Q  CG
Sbjct: 110 EF--RRKFLGLKRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVKNQGMCG 162

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + T +LV  S+ QLV+C  +C
Sbjct: 163 SCWSFSAIGA-----------------------LEGAHFLATKELVSLSEQQLVDCDHEC 199

Query: 235 ---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC G     + EY  +A GL  E+DYPY   +     C +DKSK+     
Sbjct: 200 DPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEEDYPYTGRDNT--ACKFDKSKIAASVS 257

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +  +  + +   L K+GPL++ +N+  +  Y G           PY       H VL
Sbjct: 258 NFSVVSSDEDQIAANLVKHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVL 310

Query: 341 LVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 383
           LVG+G       +    PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 311 LVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361


>gi|226469954|emb|CAX70258.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 155/347 (44%), Gaps = 51/347 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSD 110
           NI   +K F +   R Y N  E  +RF  F  +  K  E            + G + F+D
Sbjct: 57  NIGAAWKFFKINFKRAYGNVMEETKRFLIFGTNFIKMMEHNRAYQEGKATYKMGVNNFTD 116

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           ++  E+    G+    R+  RI     K +       +   +PD  DWR+     P  +Q
Sbjct: 117 KTEYELRKLRGY----RSACRIA----KPKGSTFISSEHAKLPDRVDWRRNGAVTPVKNQ 168

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +EGQ+  KT +LV  S+ QL++C
Sbjct: 169 GQCGSCWAFSSTGA-----------------------IEGQHYRKTNRLVNLSEQQLIDC 205

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKVKL-FTGK 285
           +K    +GC+G   + + +Y     G++SE  YPY + +G E  +C ++ + +    TG 
Sbjct: 206 SKSYGNNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNFTNIMAQVTGY 265

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY--DLGHAVLLVG 343
             +H      +   +   GP+SV +N+ L           +D  C+    DL H VLLVG
Sbjct: 266 INIHEGDERALMNAVTTIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLDHGVLLVG 325

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           YG +D  PYWL++NSWG    D+G+ KI +   N C +   A Y  +
Sbjct: 326 YGIEDGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCSVASAASYPLV 372


>gi|195624522|gb|ACG34091.1| thiol protease aleurain precursor [Zea mays]
          Length = 360

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 144/336 (42%), Gaps = 49/336 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           F  F V+ G+ Y +  E+ +RF  F +               R G + F+D S EE    
Sbjct: 59  FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRA- 117

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           T    ++     +  +       +        +P+  DWR+  +  P  +Q  CGSCW F
Sbjct: 118 TRLGAAQNCSATLTGNHRMRAAAVA-------LPETKDWREDGIVSPVKNQGHCGSCWTF 170

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSGC 237
           S  G                        LE  Y   TGK +  S+ QL++C  A    GC
Sbjct: 171 STTGA-----------------------LEAAYTQATGKPISLSEQQLIDCGFAFNNFGC 207

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSE 294
           +G     + EY  +  GL++E+ YPY+  NG    C +    V  K+    + +     +
Sbjct: 208 NGGLPSQAFEYIKYNGGLDTEESYPYQGVNG---ICKFKNENVGFKVLDSVN-ITLGAED 263

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYW 353
            +K  +    P+SV            + +  +D    +P D+ HAVL VGYG +D +PYW
Sbjct: 264 ELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYW 323

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           L++NSWG    DEG+FK+E G N CG+   A Y  +
Sbjct: 324 LIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIV 359


>gi|357619727|gb|EHJ72186.1| cathepsin [Danaus plexippus]
          Length = 336

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 171/370 (46%), Gaps = 56/370 (15%)

Query: 21  VFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYA 80
           VF+LC +       S T       V+ V+ +      + D   IL  F+ FI +  ++Y 
Sbjct: 3   VFVLCAI-------SFTAAAPQNDVSDVEKVRKPVFYSMDEAPIL--FENFIREYNKKY- 52

Query: 81  NDEEIKERFEYFKQD-------GHKK-HERYGTSEFSDRSPEEIL-CKTGFKWSERTYER 131
           + +E +ERF+ F  +        HK  +  +G ++F+D S EE     TGFK  +   + 
Sbjct: 53  DSKEKEERFKIFVNNLKRINDLNHKSTNAVHGINKFTDLSKEEFKKFYTGFKPDKSFLDD 112

Query: 132 IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQ 191
            +       K   ++  +   P A+DWR K V     +Q  CGSCWAFS  G        
Sbjct: 113 NI-------KKPSQLSFNITAPPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGN------- 158

Query: 192 YLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ 251
                           +E   AIK G LVE S+ QLV+C  +   CD    + + +Y   
Sbjct: 159 ----------------VESVNAIKHGNLVELSEQQLVDCDSKDEACDSGLPDNAQQYLVS 202

Query: 252 AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLL 310
            G  SE+ YPYK   G    C YD S+V +    +F     SE  M + LY   PLS+++
Sbjct: 203 HGAISEQSYPYK---GYAANCTYDSSQV-VVRLSNFEKVVLSECQMAEKLYSTAPLSIVI 258

Query: 311 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 370
            ++++  Y    +   +E     DL HAVLLVGYG +    +W+++NSWG    + G+F+
Sbjct: 259 AAEVLGTYTKGILV--NECEQSQDLNHAVLLVGYGNEGGTNFWILKNSWGTNWGEGGYFR 316

Query: 371 IERGNNACGI 380
           I+RG N   I
Sbjct: 317 IKRGVNCLMI 326


>gi|25956267|dbj|BAC41322.1| hypothetical protein [Lotus japonicus]
          Length = 358

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 147/345 (42%), Gaps = 70/345 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF  FK + H+            +G ++FSD +P E    
Sbjct: 45  FLEFKRRFGKVYATEEEHGYRFNVFKSNMHRARRHQLLDPSAVHGVTQFSDLTPME---- 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F+ S      +    +     ++  +    +P  +DWR      P  +Q +CGSCW+F
Sbjct: 101 --FQHSVLGLRGVGLPSDADSAPILPTDN---LPKDFDWRGHGAVTPVKNQGSCGSCWSF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        LEG + + TG+LV  S+ QLV+C  QC   + 
Sbjct: 156 SATGA-----------------------LEGAHFLSTGELVSLSEQQLVDCDHQCDPEEA 192

Query: 240 C---------FFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
                         + EY  +  G+  E+DYPY   NG    C +DK+K+        + 
Sbjct: 193 GSCGSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGGT--CKFDKAKIAASVANFSVV 250

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG 345
               + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGYG
Sbjct: 251 SRDEDQIAANLVKNGPLAVAINAVYMQTYVGG-------VSCPYVCSKKLNHGVLLVGYG 303

Query: 346 KQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +          PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 304 SESYAPIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSM 348


>gi|13124011|sp|Q9YWK4.1|CATV_NPVBS RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3882976|gb|AAC77812.1| cathepsin [Buzura suppressaria NPV]
          Length = 331

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 47/334 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F+ F+    + Y +  E + RF  F+Q   + + +        Y  ++F+D S  EI+ K
Sbjct: 31  FETFLANYNKMYNDTSEKERRFSIFQQTLEEINYKNRLNDSAVYQINKFADLSKNEIISK 90

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG     +T            K ++  +  G  P  +DWR++N      +Q ACG+CWA
Sbjct: 91  YTGLNMPVQT--------TNFCKTIVIDQPPGKGPLNFDWRQQNKVTSIKNQKACGACWA 142

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+                           +E QYAIK    ++ S+ Q+++C     GCD
Sbjct: 143 FATLAS-----------------------IESQYAIKNNVHIDLSEQQMIDCDYVDMGCD 179

Query: 239 GCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 297
           G     + E   Q G L  E +YPY   N        +   VK+     ++ F   E +K
Sbjct: 180 GGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFR-EEKLK 238

Query: 298 KILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 357
            +L   GP+ + +++  I +Y+   I      C  Y L HAVLLVGYG ++N+P+W  +N
Sbjct: 239 DLLRAVGPIPMAIDASGIVNYHHGIIH----YCENYGLNHAVLLVGYGVENNVPFWTFKN 294

Query: 358 SWGPIGPDEGFFKIERGNNACGI-EQIAGYATID 390
           +WG    +EG+F++ +  +ACG+  ++A  A ID
Sbjct: 295 TWGKDWGEEGYFRVRQNVDACGMTNELASSAVID 328


>gi|48145879|emb|CAG33162.1| CTSH [Homo sapiens]
          Length = 335

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 152/337 (45%), Gaps = 59/337 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCK 119
           FK++  K  + Y+  EE   R + F  +  K +         +   ++FSD S  EI  K
Sbjct: 35  FKSWTSKHRKTYST-EEYHHRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P + DWRKK N   P  +Q ACGSCW 
Sbjct: 92  HKYLWSEP--QNCSATKSNY------LRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI TGK++  ++ QLV+CA+  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD  +      
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDG---YCKFQPGKAIGFV-KDVANITIYDE 236

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDN 349
           E M + +  Y P+S    +  D +    G     +  +C  +P  + HAVL VGYG+++ 
Sbjct: 237 EAMVEAVALYNPVSFAFEVTQDFMMYRTGI---YSSTSCHKTPDKVNHAVLAVGYGEKNG 293

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           IPYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 294 IPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 330


>gi|203341|gb|AAA63484.1| cathepsin H [Rattus norvegicus]
          Length = 298

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 137/297 (46%), Gaps = 44/297 (14%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           + G ++FSD S  EI  K  + WSE   +   A +         +   GP P + DWRKK
Sbjct: 39  KMGLNQFSDMSFAEI--KHKYLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKK 88

Query: 162 -NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
            NV  P  +Q ACGSCW FS  G                        LE   AI +GK++
Sbjct: 89  GNVVSPVKNQGACGSCWTFSTTGA-----------------------LESAVAIASGKMM 125

Query: 221 EFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS 277
             ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPY   NG+   C ++  
Sbjct: 126 TLAEQQLVDCAQNFNNHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQ---CKFNPE 182

Query: 278 KVKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYD 334
           K   F  K+ ++   N    M + +  Y P+S     ++    Y       N    +P  
Sbjct: 183 KAVAFV-KNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDK 241

Query: 335 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           + HAVL VGYG+Q+ + YW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 242 VNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPIPQV 298


>gi|395502422|ref|XP_003755580.1| PREDICTED: pro-cathepsin H [Sarcophilus harrisii]
          Length = 334

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 124/251 (49%), Gaps = 38/251 (15%)

Query: 145 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLI 203
            V + GP P++ DWRKK N   P  +Q  CGSCW FS  G                    
Sbjct: 108 HVRRLGPYPESVDWRKKGNFVSPVKNQGGCGSCWTFSTTGG------------------- 148

Query: 204 FPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDY 260
               LE   AI TGKL+  ++ QLV+CA+  +  GC+G     + EY  +  G+  E  Y
Sbjct: 149 ----LESAVAIATGKLLSLAEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGIMGEDTY 204

Query: 261 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--SETMKKILYKYGPLSVL--LNSDLIH 316
           PY+  +G    C +  +K   F  KD  +      E M + +  + P+S    +  D + 
Sbjct: 205 PYEGKDG---TCKFQPNKAIAFV-KDVANITAYDEEAMTEAVAHHNPVSFAFEVTDDFLS 260

Query: 317 DYNGTPIRKNDE-TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
            + G  I  N + + SP  + HAVL VGYGK++ IPYW+V+NSWG    + G+F IERG 
Sbjct: 261 YHKG--IYSNPKCSKSPDKVNHAVLAVGYGKENGIPYWIVKNSWGTSWGNNGYFLIERGK 318

Query: 376 NACGIEQIAGY 386
           N CG+   A Y
Sbjct: 319 NMCGLADCASY 329


>gi|146084829|ref|XP_001465113.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
 gi|134069209|emb|CAM67356.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
          Length = 354

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 154/363 (42%), Gaps = 54/363 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +  L  D+      +  F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPLGVDDFIASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLN 77

Query: 96  GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V   +M V    
Sbjct: 78  AHNPHAHYDVSGKFADLTPQEFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV---- 133

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
                 DWR+K V  P  +Q  CGSCWAF+  G                        +EG
Sbjct: 134 ------DWREKGVVTPVKNQGMCGSCWAFATTGN-----------------------IEG 164

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANG 267
           Q+A+K   LV  S+  LV C     GC+G   + ++++    H   + +E  YPY +A G
Sbjct: 165 QWALKNHSLVSLSEQVLVSCDNIDDGCNGGLMQQAMQWIINDHNGTVPTEDSYPYTSAGG 224

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
            +  C +D   V           +  E +   + K GP++V +++     Y G  +    
Sbjct: 225 TRPPC-HDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQLYFGGVV---- 279

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
             C    L H VL+VG+ +Q   PYW+V+NSWG    ++G+ ++  G+N C ++     A
Sbjct: 280 TLCFGLSLNHGVLVVGFNRQAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTA 339

Query: 388 TID 390
           TID
Sbjct: 340 TID 342


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 155/346 (44%), Gaps = 72/346 (20%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           F  F  + G+ Y +++E   R++ FK +  +  +H+       +G + FSD +P E   K
Sbjct: 50  FLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVTRFSDLTPSEFRNK 109

Query: 120 T-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
             G +       R+  D  K   +  +      +P  +DWR      P  +Q +CGSCW+
Sbjct: 110 VLGLRGV-----RLPLDANKAPILPTD-----NLPSDFDWRDHGAVTPVKNQGSCGSCWS 159

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 234
           FS  G                        LEG + + TG+LV  S+ QLV+C  +C    
Sbjct: 160 FSTTGA-----------------------LEGAHFLSTGELVSLSEQQLVDCDHECDPEE 196

Query: 235 -----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                SGC+G     + EY  ++G +  E+DYPY  A  +   C +DK+K+        +
Sbjct: 197 PGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGA--DSGTCKFDKTKIAASVANFSV 254

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGY 344
                + +   L K GPL+V +N+  +  Y G           PY     L H VLLVGY
Sbjct: 255 VSLDEDQIAANLVKNGPLAVAINAAYMQTYIGG-------VSCPYVCSRRLNHGVLLVGY 307

Query: 345 G-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G       +    P+W+++NSWG    + G++KI RG N CG++ +
Sbjct: 308 GSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSM 353


>gi|195455847|ref|XP_002074892.1| GK22908 [Drosophila willistoni]
 gi|194170977|gb|EDW85878.1| GK22908 [Drosophila willistoni]
          Length = 381

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 159/339 (46%), Gaps = 56/339 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSD 110
           N ++ F  F+ + G+ YA+  E   R   F+      D        GTS        FSD
Sbjct: 69  NNVQDFGDFLQQTGKTYASAAEQALRQGVFEGSQNLVDSANAAFAAGTSTFTSAVNAFSD 128

Query: 111 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
            +  E L + TGFK S     R+ A R+ VE   +  E   P+PD++DWR+K    P   
Sbjct: 129 LTHLEFLKQLTGFKKSAEGESRVAAARQAVE---VPAE---PIPDSFDWREKGGVTPVKH 182

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCW F+  G    +L +                       KT +L   S+  LV+
Sbjct: 183 QGTCGSCWTFAATGAIEGHLFR-----------------------KTNQLPNLSEQNLVD 219

Query: 230 CAK---QCSGCDGCFFEPSIEYTHQA--GLESEKDYPYKNANGEKFKCAYDKSKVKLFT- 283
           C       +GCDG   E +  +  +A  G+ SE  Y Y +   ++  C+Y + + + +  
Sbjct: 220 CGPLNFGLNGCDGGCQEYAFAFLKEAQRGIASEAKYTYVD---KRDVCSYTEKQAEAYVH 276

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLL 341
           G   +  N  + +KK++   GP+   L +D  L+H   G     ++ETC+  +L HAVL+
Sbjct: 277 GLATVTPNDEDLLKKVVATLGPVGCSLFADEALLHYEKGI---FSNETCNGQELNHAVLV 333

Query: 342 VGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           VGYG ++   YW ++NSWG    + G+F++ RG N CGI
Sbjct: 334 VGYGSENGQDYWTIKNSWGENWGESGYFRLIRGQNFCGI 372


>gi|388521567|gb|AFK48845.1| unknown [Medicago truncatula]
          Length = 343

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 153/341 (44%), Gaps = 67/341 (19%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCKTGF 122
           F  + G++Y   +E+K RF+ F ++       +KK   Y  G + F+D + EE   ++  
Sbjct: 47  FANRYGKRYDTVDEMKRRFKIFSENLQLIKSTNKKRLGYTLGVNHFADWTWEEF--RSHR 104

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 182
             + +     +    ++  +++  EKD        WRK+ +     DQ  CGSCW FS  
Sbjct: 105 LGAAQNCSATLKGNHRITDVVLPAEKD--------WRKEGIVSEVKDQGHCGSCWTFSTT 156

Query: 183 GKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGC 240
           G                        LE  YA   GK +  S+ QLV+CA   +  GC+G 
Sbjct: 157 GA-----------------------LESAYAQAFGKNISLSEQQLVDCAGAYNNFGCNGG 193

Query: 241 FFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNGSETMKK 298
               + EY  +  GLE+E+ YPY   NG    C +    V +   G   +     + +K 
Sbjct: 194 LPSQAFEYIKYNGGLETEEVYPYTGQNG---LCKFTSENVAVQVLGSVNITLGAEDELKH 250

Query: 299 ILYKYGPLSVLLNSDLIHD--------YNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 348
            +    P+SV     ++ D        Y GT       TC  +P D+ HAVL VGYG +D
Sbjct: 251 AVAFARPVSVAF--QVVDDFRLYKKGVYTGT-------TCGSTPMDVNHAVLAVGYGIED 301

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +PYWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 302 GVPYWLIKNSWGGEWGDHGYFKMEMGKNMCGVATCSSYPVV 342


>gi|6649575|gb|AAF21461.1|U69120_1 cysteine proteinase PWCP1 [Paragonimus westermani]
          Length = 427

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 147/331 (44%), Gaps = 46/331 (13%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRS 112
           +N    F+ F  K  + Y++D    +R+  FK         Q   K    YG ++FSD S
Sbjct: 121 QNTSRLFEEFQRKFRKSYSSD--TAKRYALFKYNLLKMQLIQRLEKGTANYGITKFSDLS 178

Query: 113 PEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
            EE      F+ S    +R  +   ++E  +        +P ++DWR         DQ  
Sbjct: 179 AEE------FRHSLANMKRRKSKGSQMETAIFPTTIQS-LPPSFDWRANGAVTEVKDQGM 231

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAF+  G                        +EGQ+  KT KL+  S+ QL++C  
Sbjct: 232 CGSCWAFATTGN-----------------------IEGQWFRKTNKLISLSEQQLLDCDT 268

Query: 233 QCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
           +   C+G   E +  E     GL SEKDYPY+    +   C   +  +  +        +
Sbjct: 269 KDEACNGGLPEWAYDEIVKMGGLMSEKDYPYEAMKEQS--CHLRRPNISAYINGSATLPS 326

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI- 350
               +   L + GP+SV +N++ +  Y G         CS   L HAVLLVGYG    + 
Sbjct: 327 DEAKLAAWLVQNGPISVGVNANFLQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFLR 386

Query: 351 -PYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            PYW+V+NSWG    ++G+F++ RG+  CGI
Sbjct: 387 RPYWIVKNSWGGGWGEKGYFRMYRGDGTCGI 417


>gi|261289811|ref|XP_002611767.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
 gi|229297139|gb|EEN67777.1| hypothetical protein BRAFLDRAFT_284308 [Branchiostoma floridae]
          Length = 336

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 167/363 (46%), Gaps = 48/363 (13%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V T+A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVITMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFTFEKNTIKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM--------LMEVEKDGPVPDA 155
             +     S    + K G    E  ++RI+    K+ K+        + + + +G +P +
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKVNKPLLGSEVGDNDDNGTLPKS 119

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWR   +     DQ  CGSCWAFS  G                        LEGQ+A K
Sbjct: 120 VDWRNSAMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHANK 156

Query: 216 TGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKC 272
           TGKLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C
Sbjct: 157 TGKLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PC 214

Query: 273 AYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            +D S V   L   KD    N    +K+ +   GP+SV +++        +    ++  C
Sbjct: 215 KFDNSSVGATLIGYKDVKSGN-EHALKRAVATVGPISVAIDAGHESFQFYSSGVYDEPQC 273

Query: 331 SPYDLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
           S   L H VL+VGYG  ++     +W+V+NSWGP   D+G+  + R  +N CGI   A Y
Sbjct: 274 SSEQLDHGVLVVGYGAMNDNSHQAFWIVKNSWGPNWGDQGYIMMSRNKDNQCGIATSASY 333

Query: 387 ATI 389
             +
Sbjct: 334 PLV 336


>gi|40806502|gb|AAR92156.1| putative cysteine protease 3 [Iris x hollandica]
          Length = 292

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 72/313 (23%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV------PDAW 156
           +G ++FSD +P E          +RTY  +     K +K L+    + P+      P+ +
Sbjct: 16  HGVTQFSDLTPGEF---------KRTYLGL----RKGKKHLVGSAHEAPLLPTNDLPEDF 62

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K       +Q +CGSCW+FS +G                        LEG   + T
Sbjct: 63  DWRDKGAVTGVKNQGSCGSCWSFSTSG-----------------------ALEGANFLAT 99

Query: 217 GKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNAN 266
           GKL   S+ Q+V+C  +C          GC+G     + +Y  +  GLESEKDYPY    
Sbjct: 100 GKLETLSEQQMVDCDHECDAEEPDDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYTGT- 158

Query: 267 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
            ++  C +D+SK+K       +     E +   L K+GPL++ +N+  +  Y G      
Sbjct: 159 -DRGTCKFDESKIKASVHNFSVVSIDEEQIAANLVKHGPLAIAINAVFMQTYIGG----- 212

Query: 327 DETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
                PY     L H VLLVGYG       +    PYW+++NSWG    + G++KI RG 
Sbjct: 213 --VSCPYICGKHLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGETWGENGYYKICRGR 270

Query: 376 NACGIEQIAGYAT 388
           N CG++ +    T
Sbjct: 271 NVCGVDSMVSTVT 283


>gi|356576257|ref|XP_003556249.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 15A-like
           [Glycine max]
          Length = 374

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 161/362 (44%), Gaps = 76/362 (20%)

Query: 60  DNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEF 108
           DNE +L T   FK F+   GR Y+  EE   R   F Q+  +  E         +G ++F
Sbjct: 44  DNE-LLRTEKKFKVFMENYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDPTAVHGVTQF 102

Query: 109 SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
           SD +  E          E+ Y            +   +E +G +P+ +DWR+K       
Sbjct: 103 SDLTEVEF---------EKLYTG-XPSTNTAGGVAPPLEVEG-LPENFDWREKGAVTEVK 151

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
            Q  CGSCWAFS  G                        +EG   + TGKLV  S+ QL+
Sbjct: 152 IQGRCGSCWAFSTTGS-----------------------IEGANFLATGKLVSLSEQQLL 188

Query: 229 ECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSK 278
           +C  +C         +GC+G     +  Y  ++G LE E  YPY    GE+ +C +D  K
Sbjct: 189 DCDNKCEITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY---TGERGECKFDPEK 245

Query: 279 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 334
           + +    +F +    E  +   L K GPL++ +N+  +  Y G    P+      CS   
Sbjct: 246 ITVRI-TNFTNIPVDENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPL-----ICSKKR 299

Query: 335 LGHAVLLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
           L H VLLVGYG +        N PYW+++NSWG    ++G++K+ RG+  CGI  +   A
Sbjct: 300 LNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGKKWGEDGYYKLCRGHGMCGINTMVSAA 359

Query: 388 TI 389
            +
Sbjct: 360 MV 361


>gi|281350252|gb|EFB25836.1| hypothetical protein PANDA_012122 [Ailuropoda melanoleuca]
          Length = 294

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 138/295 (46%), Gaps = 50/295 (16%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           + G ++FSD S  EI  K  + WSE   +   A +         +   GP P   DWRKK
Sbjct: 35  KMGLNQFSDMSFAEI--KRKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKK 84

Query: 162 N-VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
                P  +Q  CGSCW FS  G                        LE   AIKTGKL+
Sbjct: 85  GKFVSPVKNQGGCGSCWTFSTTG-----------------------ALESAIAIKTGKLL 121

Query: 221 EFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS 277
             ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPYK  +G+   C +  S
Sbjct: 122 SLAEQQLVDCAQDFNNHGCQGGLPSQAFEYIRYNRGIMGEDSYPYKGQDGD---CKFQPS 178

Query: 278 KVKLFTGKDF--LHFNGSETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETC--S 331
           K   F  KD   +  N  + M + +  + P+S    +  D +    G     +  +C  +
Sbjct: 179 KAIAFV-KDVANITINDEQAMVEAVALFNPVSFAFEVTGDFMMYRKGV---YSSTSCHKT 234

Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           P  + HAVL VGYG+Q+ +PYW+V+NSWGP     G+F IERG N CG+   A Y
Sbjct: 235 PDKVNHAVLAVGYGEQNGVPYWIVKNSWGPQWGMHGYFLIERGKNMCGLAACASY 289


>gi|309752918|gb|ADO85436.1| cathepsin [Pieris rapae granulovirus]
          Length = 339

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 43/337 (12%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSE 107
           ++T++ EN    F+ FI K  + YA D+E   ++E FK        ++   K   +  + 
Sbjct: 24  TVTYNLENSDNIFEDFIKKYNKSYATDQERAIKYENFKNNLKMINDKNNGSKDAVFDINA 83

Query: 108 FSDRSPEEILCKT-GFKWSERTYERIVADREK-VEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           FSD +  ++L +T GF+   +       D  K     +++ E    +P+++DWR K+   
Sbjct: 84  FSDLNKNDLLRRTTGFRMGLKKNSYYTPDVSKECNVQVIKSEPQIILPESFDWRDKHGVT 143

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  +Q  CGSCWAFS                           +E  Y IK  K ++ S+ 
Sbjct: 144 PVKNQLECGSCWAFSAIAN-----------------------IESLYNIKHNKELDLSEQ 180

Query: 226 QLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
            L+ C    +GC G     ++E    Q G+ SEKD PY    G    C   +  V + +G
Sbjct: 181 HLINCDSINNGCGGGLMHWALETILQQGGIVSEKDEPYY---GLDAVCKPKQFNVSI-SG 236

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVG 343
                      ++++L   GP+S+ ++   + DY         + C   + L HAVLLVG
Sbjct: 237 CTRYVLKNENKLRELLIANGPISMAVDIIDVIDYKEGIT----DICENMNGLNHAVLLVG 292

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG  +NIPYW+++NSWG    ++G+ +++R  N+CG+
Sbjct: 293 YGVHNNIPYWIMKNSWGEEWGEKGYLRVQRNINSCGL 329


>gi|20136379|gb|AAM11647.1|AF490984_1 cathepsin L, partial [Fasciola hepatica]
          Length = 311

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 115/244 (47%), Gaps = 35/244 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 93  VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTG-----------------------TMEGQ 129

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 130 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 188

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      +K ++   GP +V ++  SD +   +G      
Sbjct: 189 --CRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQ 243

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
            +TCSP  + HAVL VGYG QD   YW+V+NSWG    + G+ ++ R   N CGI  +A 
Sbjct: 244 SQTCSPLRVNHAVLAVGYGTQDGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLAS 303

Query: 386 YATI 389
            A +
Sbjct: 304 VAMV 307


>gi|728637|emb|CAA59441.1| cathepsin l [Litopenaeus vannamei]
          Length = 326

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 58/347 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 110
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 18  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 78  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 127

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        LEGQ+ +K GKLV  S+  LV+C
Sbjct: 128 KQCGSCWAFSTTGS-----------------------LEGQHFLKDGKLVSLSEQNLVDC 164

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKD 286
           + +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V    TG  
Sbjct: 165 SDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYV 221

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
            +       +KK +   GP+SV +++     H Y+ T +  +D  CS   L H VL VGY
Sbjct: 222 DVEHGSESALKKAVATIGPISVGIDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGY 279

Query: 345 GKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           G  +N   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 280 GSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 326


>gi|339244637|ref|XP_003378244.1| cathepsin F [Trichinella spiralis]
 gi|316972865|gb|EFV56511.1| cathepsin F [Trichinella spiralis]
          Length = 317

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 58/301 (19%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM---LMEVEKDGPVPDAWDWR 159
           YG + F+D + +E           +TY  ++     + K    L++V++    P+ +DWR
Sbjct: 13  YGPTIFADMTQDEF---------RKTYLNMLETSALLPKQRIALLKVDR----PNKFDWR 59

Query: 160 KKNVTGPAGDQ----------AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             NV      Q            CGS WAFS                           +E
Sbjct: 60  NYNVVTKVKRQVWHKMQKKFLGKCGSSWAFSTIAN-----------------------IE 96

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGE 268
             +AIK G L+  S+ Q+++C K   GC G    +   E    +G+++E DYPY   +G 
Sbjct: 97  SAWAIKFGDLISLSEQQIIDCDKINRGCRGGQPLKAYHEIIRMSGVQAESDYPYTGLHGS 156

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C  +K K+K++     L      T+   LY++GP++V +N+D++  Y    I+    
Sbjct: 157 ---CKLNKEKIKVYINDTVLLHKNETTIANYLYEHGPVAVRMNADILMLYRKGIIKPTKS 213

Query: 329 TCSPYDLGHAVLLVGYGKQDNI-----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           +C+P  L H   ++GYGK+  +     PYW+++NSWG    + G+F++ RGN ACG+ ++
Sbjct: 214 SCNPNFLNHGATIIGYGKESWLHWWSNPYWIIKNSWGVDWGENGYFRLYRGNEACGVNRM 273

Query: 384 A 384
            
Sbjct: 274 V 274


>gi|2765358|emb|CAA74241.1| cathepsin L [Litopenaeus vannamei]
          Length = 325

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 158/347 (45%), Gaps = 58/347 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 110
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 17  SLRQQWQNFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 76

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EEI+          T    +    +    +++ + D  +P+  DWR K    P  DQ
Sbjct: 77  MTSEEIVA---------TMNGFLGAPTRRPAAVLKAD-DETLPEKVDWRTKGAVTPVKDQ 126

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        LEGQ+ +K GKLV  S+  LV+C
Sbjct: 127 KQCGSCWAFSTTGS-----------------------LEGQHFLKDGKLVSLSEQNLVDC 163

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKD 286
           + +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V    TG  
Sbjct: 164 SDKFRNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYV 220

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGY 344
            +       +KK +   GP+SV +++     H Y+ T +  +D  CS   L H VL VGY
Sbjct: 221 DVEHGSESALKKAVATIGPISVGIDASQSTFHFYH-TGVYHDDH-CSSTMLDHGVLAVGY 278

Query: 345 GKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           G  +N   +WLV+NSW     D+G+ K+ R  NN CGI   A Y  +
Sbjct: 279 GSDENGGDFWLVKNSWNTSWGDKGYIKMSRNRNNNCGIASQASYPLV 325


>gi|2414683|emb|CAB16316.1| cysteine proteinase precursor [Vicia sativa]
          Length = 379

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 173/400 (43%), Gaps = 80/400 (20%)

Query: 27  VASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDE 83
           VA  LC  +L+  +  + + +     +   L   + ++L T   FK F+    ++Y+  E
Sbjct: 15  VAIFLCALTLSSSLHHETLIQ----DVARKLELKDNDLLTTEKKFKLFMKDYSKKYSTTE 70

Query: 84  EIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI-LCKTGFK--WSERTYERI 132
           E   R   F ++  K  E         +G ++FSD S EE     TGFK  +        
Sbjct: 71  EYLLRLGIFAKNMVKAAEHQALDPTAIHGVTQFSDLSEEEFERFYTGFKGGFPSSNAAGG 130

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
           VA    V+            P+ +DWR+K        Q  CGSCWAF+  G         
Sbjct: 131 VAPPLDVKGF----------PENFDWREKGAVTGIKTQGKCGSCWAFTTTGS-------- 172

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC--------SGCDGCFFEP 244
                          +EG   + TGKLV  S+ QLV+C  +C        +GC+G     
Sbjct: 173 ---------------IEGANFLATGKLVSLSEQQLVDCDNKCDITKTSCDNGCNGGLMTT 217

Query: 245 SIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYK 302
           + +Y  +AG LE E  YPY  A GE   C +D +KV +    +F +    E  +   L  
Sbjct: 218 AYDYLMEAGGLEEETSYPYTGAQGE---CKFDPNKVAVRV-SNFTNIPADENQIAAYLVN 273

Query: 303 YGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQD-------NIPY 352
           +GPL++ +N+  +  Y G    P+      CS   L H VLLVGY  +          PY
Sbjct: 274 HGPLAIAVNAVFMQTYVGGVSCPL-----ICSKRRLNHGVLLVGYNAEGFSILRLRKKPY 328

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 392
           W ++NSWG    ++G++K+ RG+  CG+  +   A +  +
Sbjct: 329 WTIKNSWGEQWGEKGYYKLCRGHGMCGMNTMVSAAMVTQI 368


>gi|33242872|gb|AAQ01140.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 164/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSSKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|358334193|dbj|GAA43174.2| cysteine proteinase 3, partial [Clonorchis sinensis]
          Length = 374

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 156/351 (44%), Gaps = 64/351 (18%)

Query: 61  NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEF 108
           N  +   ++ F V+  R+Y + +E   R   F Q   +  E            + G +EF
Sbjct: 60  NYTVHLAWEKFRVEFNRKYTDSQEQINRLNVFCQSFMRVREHNKAYEEGRVTFKRGINEF 119

Query: 109 SDRSPEEILCKTG-----FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           SDR P+E     G      K S  T+ ++ A                P P + DWR+   
Sbjct: 120 SDRFPDERQHACGGRINISKHSGSTFRKVAA----------------PAPQSIDWRRNGA 163

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P   Q  CG+CWAF+  G                        +EG+Y I   +L  FS
Sbjct: 164 VTPVRRQGDCGACWAFAATGA-----------------------IEGRYFIFEKRLETFS 200

Query: 224 KSQLVECAK--QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKN-ANGEKFK-CAYDKSK 278
             QLV+C +    +GC+G +   + EY     GLE E+DYPY + A G     C YD++K
Sbjct: 201 PQQLVDCIQGDTTNGCNGGYPSEAFEYVENVGGLELERDYPYVSVATGLPNPFCGYDQTK 260

Query: 279 VKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDL 335
            ++  T    L     E + + +  YGP+++L ++      DY      + +   +  D+
Sbjct: 261 QQVKLTSHVILPSGDEEALLQAVSIYGPIAILFDASHPSFKDYESDIYSEENCGTTLDDV 320

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
            HA+L+VGYG++   PYWLV+NSWG    ++G+ ++ RG N C +   + Y
Sbjct: 321 THAMLVVGYGEELGEPYWLVKNSWGDKWGEKGYMRVRRGVNMCAVAGFSSY 371


>gi|294462776|gb|ADE76932.1| unknown [Picea sitchensis]
          Length = 403

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 173/399 (43%), Gaps = 82/399 (20%)

Query: 27  VASCLCLPSLTDRITDQV---VARVDTLAIEGSLT--FDNENILET-----FKAFIVKRG 76
           +A C+ L  ++ +I+  +     RV        +T  F+ E++L       F  FIV+ G
Sbjct: 39  LAGCMFLLVISTQISFSLGLDNGRVSEGGFIAQVTEKFNREHLLNLRSKTLFDKFIVEHG 98

Query: 77  RQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWSERT 128
           + Y+  EE   R   F+++  K  E         +G + FSD +  E          E  
Sbjct: 99  KVYSTIEEYVRRLRIFEKNLLKAAENQALDPTAVHGITPFSDLTEYEF---------ESR 149

Query: 129 YERIVADREKV--EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
           Y  ++  R+ +  EK   E+     +P  +DWR+K        Q  CGSCWAFS  G   
Sbjct: 150 YTGLLGVRQGLVNEKQTAEILPVDDLPANFDWREKGAVTEVKTQGNCGSCWAFSTTG--- 206

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SGC 237
                               ++EG   + TGKL+  S+ QL++C  +C         +GC
Sbjct: 207 --------------------VVEGANFLATGKLLNLSEQQLIDCDHKCDPLNTKACDNGC 246

Query: 238 DGCFFEPSIEYTHQAG-LESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET 295
            G     +  Y  +AG +E  K+YPY    G+ KF       K   FT  +       + 
Sbjct: 247 HGGLMTNAYNYLMEAGGIEEAKNYPYTGVQGDCKFNPDLAAVKAINFTTVNL----DEKQ 302

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQDNI-- 350
           +   L K+GPL+V LN+  +  Y G    P+      CS   + H VLLVGYG +     
Sbjct: 303 IAANLVKHGPLAVGLNAAFMQTYIGGVSCPL-----ICSKRFINHGVLLVGYGHKGFALL 357

Query: 351 -----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
                PYW+++NSWG    + G++K+ RG+  CG+ ++ 
Sbjct: 358 RLGYRPYWIIKNSWGKRWGEHGYYKLCRGHGECGMNKMV 396


>gi|33242878|gb|AAQ01143.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 165/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILVAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK-VEKMLMEVE-----KDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K V+K L+  E      +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|10441624|gb|AAG17127.1|AF190653_1 cathepsin L-like cysteine proteinase CAL1 [Diabrotica virgifera
           virgifera]
          Length = 322

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 163/362 (45%), Gaps = 59/362 (16%)

Query: 45  VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHK 98
           +A    +   G+L+ +     + +++F V+ G+ Y N  E + RF  F+       + + 
Sbjct: 3   IAFAAVILSAGALSLN-----QHWESFKVQHGKVYKNPIEERVRFSVFQANLKTINEHNA 57

Query: 99  KHER------YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 152
           K+E+         ++F+D +PEE   K G +           +  K++K       +  V
Sbjct: 58  KYEQGLVGYTMAVNQFADMTPEEFKAKLGMQ---------AKNMPKIKKSRHVKNVNAEV 108

Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
           PD+ DWR+K       DQ  CGSCWAFS  G                        LEGQ 
Sbjct: 109 PDSVDWRQKGAVLGVKDQGQCGSCWAFSATGS-----------------------LEGQN 145

Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCD---GCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
            I  GK    S+ +L++C+ +    D   G     + E+  + G+ SE  YPY+   G+ 
Sbjct: 146 YIVNGKSEPLSEQELLDCSVEYGNGDCDEGGLMTLAFEFVEENGIVSEASYPYEAIQGD- 204

Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
             C     K  L        +   E +++ +   GP+S  + ++ I  ++      +D  
Sbjct: 205 --CRTTNDKAVLHIQGYNEVYPSEEALRQAVGTVGPISAAIWAEPIQFFSSGIY--DDPN 260

Query: 330 CSPYD--LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
           C  Y   L H +L+VGYG+++  PYW+V+NSWG    +EG+F+++R    CG+ Q+A Y 
Sbjct: 261 CLNYVEYLDHGILVVGYGEENGTPYWIVKNSWGATWGEEGYFRLKRNIALCGLAQMASYP 320

Query: 388 TI 389
            +
Sbjct: 321 VL 322


>gi|310751866|gb|ADP09371.1| cathepsin L-like proteinase [Fasciola hepatica]
          Length = 326

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 116/240 (48%), Gaps = 35/240 (14%)

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
            VPD  DWR+        DQ  CGSCWAFS  G                        +EG
Sbjct: 107 AVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEG 143

Query: 211 QYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE 268
           QY       + FS+ QLV+C++    +GC G   E + EY  Q GLE+E  YPY+   G+
Sbjct: 144 QYMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ 203

Query: 269 KFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRK 325
              C Y+K   V   TG   +H      +K ++   GP +V ++  SD +  Y+G   + 
Sbjct: 204 ---CRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQS 259

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
             +TCSP  L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 260 --QTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|318816588|ref|NP_001187996.1| cathepsin L precursor [Ictalurus punctatus]
 gi|308324547|gb|ADO29408.1| cathepsin L [Ictalurus punctatus]
          Length = 334

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 167/365 (45%), Gaps = 55/365 (15%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ--------- 94
           V+  +  LA   S++ ++   LE F ++ +K G+ Y + EE  +R   + +         
Sbjct: 6   VITALVALASATSISLED---LE-FHSWKLKFGKIYKSVEEESQRKNTWLENRKLVLVHN 61

Query: 95  ---DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP 151
              D   K  R G + F+D   +E   ++ FK    ++ R    R         ++  G 
Sbjct: 62  MLADQGIKSYRLGMTYFADMDNQEYR-QSVFKGCLGSFNRTKGHRAST----FLLQAGGA 116

Query: 152 V-PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
           V PD  DWR K       DQ  CGSCWAFS  G                        LEG
Sbjct: 117 VLPDTVDWRDKGYVAEVKDQKNCGSCWAFSATGS-----------------------LEG 153

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG 267
           Q   KTGKLV  S+ QLV+C+ +    GC G   + + EY     G+++E+ YPY+  +G
Sbjct: 154 QTFRKTGKLVSLSEQQLVDCSGKYGNMGCGGGLMDLAFEYIEDNKGIDTEESYPYEATDG 213

Query: 268 EKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIH-DYNGTPIRK 325
           +   C +  + V    TG   ++      ++K +   GP+SV +++  I     G+ I  
Sbjct: 214 D---CRFKPATVGATCTGYVDINSEDENALQKAVANIGPISVAIDAGHISFQLYGSGIY- 269

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
           N+  CS  DL H VL VGYG  +   YWLV+NSWG    D+G+ K+ R  NN CGI   A
Sbjct: 270 NEPNCSSEDLDHGVLAVGYGTDNQQDYWLVKNSWGLDWGDQGYIKMTRNKNNQCGIATAA 329

Query: 385 GYATI 389
            Y  +
Sbjct: 330 SYPLV 334


>gi|344284284|ref|XP_003413898.1| PREDICTED: pro-cathepsin H-like [Loxodonta africana]
          Length = 335

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 152/334 (45%), Gaps = 53/334 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           F++++ +  ++Y++ EE  +R + F     K + H       +   ++FSD +  EI  K
Sbjct: 35  FQSWMAQHQKKYSS-EEYHQRQQTFVSNWRKINAHNARNHTFKMALNQFSDMTFAEI--K 91

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +         +   GP P   DWRKK +   P  +Q ACGSCW 
Sbjct: 92  QKYLWSEP--QNCSATKGNY------LRGTGPYPPFVDWRKKGHFVSPVKNQGACGSCWT 143

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI  GKL+  ++ QLV+CAK  +  G
Sbjct: 144 FSTTGA-----------------------LESAIAIAGGKLLSLAEQQLVDCAKDFNNHG 180

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGS 293
           C G     + EY  +  G+  E  YPYK   G+   C +   K   F  KD   +  N  
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYK---GQDDVCKFQPKKAIAFV-KDVANITLNDE 236

Query: 294 ETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E M + +  Y P+S     +D    Y+           +P  + HAVL VGYG++  IPY
Sbjct: 237 EAMVEAVALYNPVSFAFEVTDDFMKYSKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPY 296

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
           W+V+NSWGP    +G+F IERG N CG+   A Y
Sbjct: 297 WIVKNSWGPYWGMDGYFLIERGKNMCGLAACASY 330


>gi|224113123|ref|XP_002316398.1| predicted protein [Populus trichocarpa]
 gi|222865438|gb|EEF02569.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 154/357 (43%), Gaps = 71/357 (19%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEIL 117
           E FK FI +  ++YA  EE   RF  F ++  +  E         +G + F D + EE  
Sbjct: 12  EKFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDPTAIHGVTPFMDLTEEEF- 70

Query: 118 CKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                   ER Y  ++      VEK  +       +PD++DWR+K        Q +CGSC
Sbjct: 71  --------ERMYAGVLGGGTVPVEKGSVSFMDASGLPDSFDWREKGAVTDVKIQGSCGSC 122

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC-- 234
           WAFS  G                        +EG   I TGKL+  S+ QLV+C + C  
Sbjct: 123 WAFSTTGS-----------------------VEGANFIATGKLLNLSEQQLVDCDRVCDK 159

Query: 235 -------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 286
                   GC G     +  Y  +A GL+ E  YPY   +GE   C +D  K+ +    +
Sbjct: 160 TDKASCDDGCGGGLMTNAYRYLIEAGGLQEESSYPYTGKSGE---CKFDPEKIAVKV-AN 215

Query: 287 FLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLV 342
           F      E  +   L  +GPL++ LN+  +  Y G    P+      C    L H VLLV
Sbjct: 216 FTSIAVDENQIAANLVHHGPLAIGLNAIFMQTYIGGVSCPL-----ICGKKWLNHGVLLV 270

Query: 343 GYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDVV 392
           GYG +          PYW+++NSWG    ++G++++ RG+  CG+ ++       V 
Sbjct: 271 GYGARGYSILRFGYKPYWIIKNSWGNHWGEKGYYRLCRGHGMCGMNKMVSAVVTKVA 327


>gi|166235890|ref|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus]
 gi|341940309|sp|P49935.2|CATH_MOUSE RecName: Full=Pro-cathepsin H; AltName: Full=Cathepsin B3; AltName:
           Full=Cathepsin BA; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74151776|dbj|BAE29677.1| unnamed protein product [Mus musculus]
 gi|74181999|dbj|BAE34071.1| unnamed protein product [Mus musculus]
 gi|74211659|dbj|BAE29188.1| unnamed protein product [Mus musculus]
 gi|74213518|dbj|BAE35569.1| unnamed protein product [Mus musculus]
 gi|148688954|gb|EDL20901.1| cathepsin H, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 153/339 (45%), Gaps = 53/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 119
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWT 141

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 142 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQAFNNHG 178

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  G+  E  YPY    G+   C ++  K   F      +  N   
Sbjct: 179 CKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEA 235

Query: 295 TMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG+Q+ + Y
Sbjct: 236 AMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLY 294

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           W+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 295 WIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333


>gi|146335578|gb|ABQ23398.1| cathepsin L isotype 1 [Trypanoplasma borreli]
          Length = 443

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 150/359 (41%), Gaps = 48/359 (13%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 101
           V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6   VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 102 ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 155
                  +G +EF+D S EE   +          +   A   K          DG     
Sbjct: 61  RKNPMATFGPNEFADMSSEEFQTRHNAARHYAAAKARRAKHTKSFTKEEIKAADG---QK 117

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWR K       +Q +CGSCW+FS  G                        +EGQ AI 
Sbjct: 118 IDWRLKGAVTSVKNQGSCGSCWSFSTTGN-----------------------IEGQNAIA 154

Query: 216 TGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKC 272
           TG LV  S+ +LV C    +GC+G   + +  +   T    + +E  YPY + NG    C
Sbjct: 155 TGNLVSLSEQELVSCDTTDNGCNGGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPAC 214

Query: 273 AYD-KSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
           +Y+  +K    T  +F    G+E  M   ++ YGPLS+ +++     Y G  I      C
Sbjct: 215 SYNLDNKPVGATISNFQDITGTEEDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----C 270

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
               + H VL+VGY      PYW+++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 271 PDVQIDHGVLIVGYDDTAPTPYWIIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329


>gi|74229834|gb|AAU14993.2| cysteine proteinase [Cryptobia salmositica]
          Length = 443

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 43/326 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCK 119
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 25  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 84

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 85  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 141

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+AI TG+LV  S+ +LV C     GC+G
Sbjct: 142 STTGN-----------------------IEGQHAIATGQLVAVSEQELVSCDPIDDGCNG 178

Query: 240 CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 295
              + +  +    H+  + +E +YPY + NG    C+   +SK    T   F     +E 
Sbjct: 179 GLMDNAFGWLISAHKGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEE 238

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   ++K+GPLS+ +++     Y G  +      C    + H VL+VG+    + PYW+
Sbjct: 239 DMAAFVFKHGPLSIGVDASTWQSYAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWI 294

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGI 380
           ++NSW     +EG+ ++ +G+N CG+
Sbjct: 295 IKNSWTANWGEEGYIRVAKGSNQCGL 320


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 123/246 (50%), Gaps = 37/246 (15%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P   DWR+K    P  DQ  CGSCW+FS  G                        LEGQ
Sbjct: 114 LPKTVDWRQKGAVTPVKDQGQCGSCWSFSATGS-----------------------LEGQ 150

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE 268
             +KTGKLV  S+  LV+C+     +GC+G   + + +Y +   G+++E  YPY+     
Sbjct: 151 VFLKTGKLVSLSEQNLVDCSTSYGNNGCEGGLMDQAFQYVSDNKGIDTEASYPYE---AR 207

Query: 269 KFKCAYDKSKVKLFTGKDFLHFN---GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
           +  C + K+KV    G D  H +   G E  ++  L   GP+SV ++++       +   
Sbjct: 208 ENTCRFKKNKV---GGTDKGHVDIPAGDEKALQNALATVGPISVAIDANHGSFQFYSKGV 264

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQI 383
            N+  CS YDL H VL VGYG ++   YWLV+NSWGP   + G+ KI R + N CGI  +
Sbjct: 265 YNEPNCSSYDLDHGVLAVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHSNHCGIASM 324

Query: 384 AGYATI 389
           A Y  +
Sbjct: 325 ASYPLV 330


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 56/357 (15%)

Query: 53  IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 99
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHNLKYDLGHFT 72

Query: 100 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 156
           ++  G ++F+D   EE +   TGF+         V+   K  K    +     G +P   
Sbjct: 73  YD-LGINQFTDLQNEEFVAMMTGFR---------VSGTSKAAKGSTFLPPNNVGELPKTV 122

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K    P  DQ  CGSCWAFS  G                        +EGQ+   T
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGS-----------------------VEGQHFKAT 159

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYD 275
           GKLV  S+  LV+C+ + +GCDG F + + +Y   A G+++E  YPYK  +G   KC + 
Sbjct: 160 GKLVSLSEQNLVDCSGRDAGCDGGFMDRAFQYIIDAGGIDTEASYPYKAVDG---KCHFK 216

Query: 276 KSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 334
           K+ V    TG   +     + ++K +   GP+SV +++  +   +      N+  C    
Sbjct: 217 KANVGATVTGYTDVTSGSEKALQKAVAHVGPISVAIDASHMSFQHYKSGVYNEPGCDSTV 276

Query: 335 LGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 277 LDHGVLAVGYGTSSDGTDYWIVKNSWAETWGMNGYVWMSRNKDNQCGIATNASYPLV 333


>gi|17384029|emb|CAD12392.1| cysteine proteinase [Leishmania infantum]
          Length = 354

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 147/339 (43%), Gaps = 54/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-EFSDRSPEEI-- 116
           +  F  + G+ +  D E   RF  FKQ+         H  H  Y  S +F+D +P+E   
Sbjct: 42  YGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAK 101

Query: 117 --LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
             L    +    + Y+  V   + V   +M V          DWR+K V  P  +Q  CG
Sbjct: 102 LYLNPNYYARHGKDYKEHVHVDDSVRSGVMSV----------DWREKGVVTPVKNQGMCG 151

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAF+  G                        +EGQ+A+K   LV  S+  LV C    
Sbjct: 152 SCWAFATTGN-----------------------IEGQWALKNHSLVSLSEQVLVSCDNID 188

Query: 235 SGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
            GC+G   + ++++    H   + +E  YPY +A G +  C +D   V           +
Sbjct: 189 DGCNGGLMQQAMQWIINDHNGTVPTEDSYPYTSAGGTRPPC-HDNGTVGAKIKGYMSLPH 247

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
             E +   + K GP++V +++     Y G  +      C    L H VL+VG+ +Q   P
Sbjct: 248 DEEEIAAYVGKNGPVAVAVDATTRQLYFGGVV----TLCFGLSLNHGVLVVGFNRQAKPP 303

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           YW+V+NSWG    ++G+ ++  G+N C ++     ATID
Sbjct: 304 YWIVKNSWGSSWGEKGYIRLAMGSNQCLLKNYVVTATID 342


>gi|50355621|dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 166/382 (43%), Gaps = 59/382 (15%)

Query: 30  CLCLPSLTDRITDQVVARVDTLAI----EGSLTFDNENILETFKAFIVKRGRQYANDEEI 85
           CLC  +        ++A +  L        S T    ++ E  + ++++ GR Y ++ E 
Sbjct: 15  CLCTSTTNMAFKHFMIAALILLGAWACQATSRTLPEASMFERHEQWMIQYGRVYKDEAEK 74

Query: 86  KERF----------EYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVAD 135
             RF          E F +DG + + +   +EF+D++ EE      F+ S   Y+  V+ 
Sbjct: 75  SVRFQIFMDNVKFIEEFNKDGRQSY-KLAVNEFADQTNEE------FQASRNGYKMAVSS 127

Query: 136 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNH 195
           R   +  L   E    VP + DWRKK    P  DQ  CGSCWAFS               
Sbjct: 128 RPS-QTTLFRYENVTAVPSSMDWRKKGAVTPVKDQGQCGSCWAFSTIAA----------- 175

Query: 196 IDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEY-THQA 252
                        EG   +KTGKL+  S+ +LV+C K  +  GC+G + E   E+     
Sbjct: 176 ------------TEGITKLKTGKLISLSEQELVDCDKTGEDQGCEGGYMEDGFEFIVKNK 223

Query: 253 GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN- 311
           G+  E  YPY  A+G       + S+    +G + +  N    + K +    P+SV ++ 
Sbjct: 224 GIALEASYPYTAADG-TCNSKEEASRAAKISGYEKVPANSETALLKAVANQ-PVSVSIDA 281

Query: 312 SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK-QDNIPYWLVRNSWGPIGPDEGFFK 370
           S +   +  + +   +  C   DL H V  VGYGK  D   YWLV+NSWG    D G+  
Sbjct: 282 SGVAFQFYSSGVFTGE--CGT-DLDHGVTAVGYGKTSDGTKYWLVKNSWGASWGDSGYIM 338

Query: 371 IERGNNA----CGIEQIAGYAT 388
           ++RG  A    CGI   A Y T
Sbjct: 339 MQRGVAAKGGLCGIAMDASYPT 360


>gi|33242874|gb|AAQ01141.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 164/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|146335580|gb|ABQ23399.1| cathepsin L isotype 2 [Trypanoplasma borreli]
          Length = 443

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 154/359 (42%), Gaps = 48/359 (13%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-- 101
           V A +    + G+ T D     + F  F     R Y +  E ++RFE F  +  K  E  
Sbjct: 6   VTALLMVCTVMGAPTTD-----DLFSDFKATHARNYVSPGEERKRFEIFAANMKKAAELN 60

Query: 102 ------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 155
                  +G +EF+D S EE   +     + R Y    A R K  K   + E        
Sbjct: 61  RKNPMATFGPNEFADMSSEEFQTRHN---AARHYAAAKARRAKHTKSFTKEEIKAADGQK 117

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWR K       +Q +CGSCW+FS  G                        +EGQ AI 
Sbjct: 118 IDWRLKGAVTSVKNQGSCGSCWSFSTTGN-----------------------IEGQNAIA 154

Query: 216 TGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKC 272
           TG LV  S+ +LV C    +GC+G   + +  +   T    + +E  YPY + NG    C
Sbjct: 155 TGNLVSLSEQELVSCDTTDNGCNGGLMDNAFGWLISTRGGQIATEASYPYVSGNGIVPAC 214

Query: 273 AYD-KSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
           +Y+  +K    T  +F    G+E  M   ++ YGPLS+ +++     Y G  I      C
Sbjct: 215 SYNLDNKPVGATISNFQDITGTEEDMAAFVFNYGPLSIGVDASTWQSYAGGIITY----C 270

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
               + H VL+VGY      PYW+++NSW     ++G+ ++ +G+N CG+      + +
Sbjct: 271 PDVQIDHGVLIVGYDDTAPTPYWIIKNSWTANWGEDGYIRVAKGSNMCGLTSTPSSSVV 329


>gi|473159|emb|CAA83538.1| cathepsin L [Schistosoma mansoni]
          Length = 317

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 168/356 (47%), Gaps = 56/356 (15%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK-----QDGHKKHE---- 101
           +AI   L+   ++I + +K   +K  + Y++  EI+ +  + +     Q  + +H+    
Sbjct: 1   VAIAQHLSLQYDDIWKQWK---LKYNKTYSDSNEIRRKAIFMRYVEKIQQHNLRHDLGLE 57

Query: 102 --RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR 159
               G ++F D   EEI  KT    S+      + D +K E   +E+  D P+P  WDWR
Sbjct: 58  GYTMGLNQFCDMDWEEI--KT-IMLSKVFGNSPLWDDKKEE---LELSND-PLPSKWDWR 110

Query: 160 KKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKL 219
                 P  +Q  CGSCWAFS AG                        +EGQ   K  KL
Sbjct: 111 DHGAVTPVKNQGLCGSCWAFSAAG-----------------------AVEGQLVKKHKKL 147

Query: 220 VEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS 277
           +  S+ QLV+C+ +    GC G   + S  Y  +  +ESEKDY Y    G    C + KS
Sbjct: 148 ISLSEQQLVDCSYKYGNDGCQGGTMDQSFAYLEKYPIESEKDYKYI---GHDSSCHFRKS 204

Query: 278 KVKLFTGKDF-LHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYD 334
           K  +   K   L     E ++K LY YGP+SV +++  DLI   +G    K    CS + 
Sbjct: 205 KGVVKVKKFVDLPARDEEKLQKALYHYGPISVAIDALDDLILYKSGIYESKQ---CSSFL 261

Query: 335 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           L H VL VGYG+++   YWL++NSWG      G+FK+ R  +N CGI   A +  +
Sbjct: 262 LNHGVLAVGYGRENRKDYWLIKNSWGTTWGMNGYFKLRRNKHNMCGIATNASFPLL 317


>gi|228244|prf||1801240B Cys protease 2
          Length = 323

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 161/387 (41%), Gaps = 84/387 (21%)

Query: 20  AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 79
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 80  ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 127
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 128 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSN 187
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G    
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGS--- 139

Query: 188 YLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPS 245
                               LEGQ+ +KTG L+  ++ QLV+C++     GC+G +   +
Sbjct: 140 --------------------LEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDA 179

Query: 246 IEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKY 303
            +Y     G+++E  YPY+  +G    C +D + V           +GSET +++ +   
Sbjct: 180 FDYIKANNGIDTEASYPYEARDG---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDI 236

Query: 304 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 363
           GP+SV +++        +     + +CSP  L HAVL VGYG +    +WLV+NSW    
Sbjct: 237 GPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSW 296

Query: 364 PDEGFFKIERG-NNACGIEQIAGYATI 389
            D G+ K+ R  NN CGI  +A Y  +
Sbjct: 297 GDAGYIKMSRNRNNNCGIATVASYPLV 323


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 150/337 (44%), Gaps = 51/337 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHERYGTS------EFSDRSPEEILC 118
           +F  F ++  ++Y + EEIK+RFE F  +    + H R G S      EF+D + +E   
Sbjct: 56  SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDE--- 112

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
              F+  +    +  +   K    L  V     +P+  DWRK  +  P   Q  CGSCW 
Sbjct: 113 ---FRKHKLGASQNCSATTKGNLKLTNV----VLPETKDWRKDGIVSPVKAQGKCGSCWT 165

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  YA   GK +  S+ QLV+CA   +  G
Sbjct: 166 FSTTGA-----------------------LEAAYAQAFGKGISLSEQQLVDCAGAFNNFG 202

Query: 237 CDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLHFNGS 293
           C+G     + EY     GL++E+ YPY   NG    C + ++   VK+ +  + +     
Sbjct: 203 CNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNG---ICKFSQANIGVKVISSVN-ITLGAE 258

Query: 294 ETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
             +K  +    P+SV          Y        +   +P D+ HAVL VGYG ++  PY
Sbjct: 259 YELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPY 318

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           WL++NSWG    ++G+FK+E G N CG+   A Y  +
Sbjct: 319 WLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIV 355


>gi|342305190|dbj|BAK55649.1| cathepsin O [Oplegnathus fasciatus]
          Length = 338

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 146/330 (44%), Gaps = 59/330 (17%)

Query: 68  FKAFIVKRGRQY-ANDEEIKERFEYFKQDGHKKHE------------RYGTSEFSDRSPE 114
           F +F     R Y  N EE   R   F Q+  K+H             +YG + FSD S +
Sbjct: 42  FDSFREHFHRMYEVNGEEFNRRHLNF-QNATKRHAYLNSLSTAPQSAKYGINRFSDLSQK 100

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E             Y R  ADR  +   L    K   +P  +DWR K V  P  +Q ACG
Sbjct: 101 EF---------RGLYLRASADRAPLFSGL----KTEGLPAKFDWRDKAVVAPVQNQQACG 147

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS+ G                        ++  +AI    L + S  Q+++C+ Q 
Sbjct: 148 SCWAFSVVGA-----------------------MQSVHAIGGSPLAQLSVQQVLDCSFQN 184

Query: 235 SGCDGCFFEPSIEYTHQA--GLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHF 290
            GC+G     ++ +  Q    L  + +Y YK   G    F  ++    VK FT  DF   
Sbjct: 185 HGCNGGSPFRALTWLKQTRVKLVPQSEYSYKAETGICHFFSQSHAGVAVKNFTAHDFS-- 242

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              E M   L ++GPL+ ++++    DY G  I+ +   CS     HAVL+VGY    +I
Sbjct: 243 GQEEAMMGQLVEHGPLAAIVDAVSWQDYLGGIIQHH---CSSQWSNHAVLVVGYNTTGDI 299

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           PYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 300 PYWIVQNSWGTTWGNEGYVYIKIGGNVCGI 329


>gi|20147096|gb|AAM09951.1| 49 kDa cysteine proteinase Cysp1 [Cryptobia salmositica]
          Length = 428

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 43/326 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH--------ERYGTSEFSDRSPEEILCK 119
           F  F     R YA+ +E ++RFE F  +  K            +G +EF+D + EE   +
Sbjct: 10  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 69

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                + R Y    A   K  K     E    V    DWR K    P  +Q ACGSCW+F
Sbjct: 70  HN---AARHYAAAKARPPKNTKTFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 126

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+AI TG+LV  S+ +LV C     GC+G
Sbjct: 127 STTGN-----------------------IEGQHAIATGQLVAVSEQELVSCDPIDDGCNG 163

Query: 240 CFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSET 295
              + +  +    H+  + +E +YPY + NG    C+   +SK    T   F     +E 
Sbjct: 164 GLMDNAFGWLISAHKGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEE 223

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   ++K+GPLS+ +++     Y G  +      C    + H VL+VG+    + PYW+
Sbjct: 224 DMAAFVFKHGPLSIGVDASTWQSYAGGIMSY----CPQDQIDHGVLIVGFDDTASTPYWI 279

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGI 380
           ++NSW     +EG+ ++ +G+N CG+
Sbjct: 280 IKNSWTANWGEEGYIRVAKGSNQCGL 305


>gi|13905172|gb|AAH06878.1| Cathepsin H [Mus musculus]
          Length = 333

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 153/339 (45%), Gaps = 53/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 119
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q ACGSCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVINQGACGSCWT 141

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 142 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQAFNNHG 178

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  G+  E  YPY    G+   C ++  K   F      +  N   
Sbjct: 179 CKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEA 235

Query: 295 TMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG+Q+ + Y
Sbjct: 236 AMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLY 294

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           W+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 295 WIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 31/246 (12%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P A DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
           +GE   C + K  V    TG   +     + +KK +   GP+SV +++        +   
Sbjct: 210 DGE---CRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGV 266

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQI 383
            ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI   
Sbjct: 267 YDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQ 326

Query: 384 AGYATI 389
           A Y  +
Sbjct: 327 ASYPLV 332


>gi|348505824|ref|XP_003440460.1| PREDICTED: pro-cathepsin H-like [Oreochromis niloticus]
          Length = 324

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 157/339 (46%), Gaps = 57/339 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHER------YGTSEFSDRSPEEILCK 119
           FK+++ +  ++Y N +E  +R + F ++  +  KH         G +EFSD +  E   +
Sbjct: 26  FKSWMAQYNKEY-NLKEYYQRLQIFTENKKRIDKHNEGNHSFTMGLNEFSDMTFSEF--R 82

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             F  SE   +   A +            +G +PD+ DWRKK N   P  +Q  CGSCW 
Sbjct: 83  KSFLMSEP--QNCSATKGNY------FSSNGLLPDSIDWRKKGNYVTPVKNQGGCGSCWT 134

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI  GKLV  S+ QLV+CA+  +  G
Sbjct: 135 FSTTG-----------------------CLESVTAINKGKLVPLSEQQLVDCAQDFNNHG 171

Query: 237 CDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK--DFLHFNGS 293
           C+G     + EY  +  GL +E+DYPY    G   KC Y   K   F     +   +N  
Sbjct: 172 CNGGLPSQAFEYIMYNKGLMTEQDYPYTAFEG---KCVYKPGKAAAFVNSVVNITAYNEL 228

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYD-LGHAVLLVGYGKQDNI 350
           E M   +  + P+S    + SD +  + G  +  + E  +  D + HAVL VGYG+++  
Sbjct: 229 E-MVDAVGTHNPVSFAFEVTSDFMSYHQG--VYTSTECHNTTDKVNHAVLAVGYGQENGT 285

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWG      G+F IERG N CG+   A +  +
Sbjct: 286 PYWIVKNSWGSSWGMNGYFLIERGKNMCGLAACASFPVV 324


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 151/338 (44%), Gaps = 54/338 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEEILCK 119
           F  F  K  ++Y   EE+K RF  F +     + H K +       +EF+D + EE    
Sbjct: 29  FAGFAAKYKKEYKTVEELKHRFVTFLESVKLVETHNKGQHSYSLAVNEFADMTFEEF--- 85

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                  R    +  ++     +   V     +P   DWR++ +     +QA+CGSCW F
Sbjct: 86  -------RDSRLMKGEQNCSATVGNHVLTGESLPKTKDWREEGIVSQVKNQASCGSCWTF 138

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  +A  TGK+V  S+ QLV+CA + +  GC
Sbjct: 139 STTGA-----------------------LEAAHAQATGKMVLLSEQQLVDCAGEFNNFGC 175

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET- 295
            G     + EY  +  G+++E  YPY   N +  +C + K+ +            G+ET 
Sbjct: 176 GGGLPSQAFEYIRYNGGIDTEDSYPY---NAKDSQCRFHKNTIGAQVWDVVNITEGAETQ 232

Query: 296 MKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IP 351
           +K  +    P+SV    +++HD   YNG      +    P  + HAVL VGYG+ +N +P
Sbjct: 233 LKHAIATMRPVSVAF--EVVHDFRLYNGGVYTSLNCHTGPQTVNHAVLAVGYGEDENGVP 290

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YW+++NSWG      G+F +E G N CG+   A Y  +
Sbjct: 291 YWIIKNSWGADWGMNGYFNMEMGKNMCGVATCASYPVV 328


>gi|149725427|ref|XP_001494683.1| PREDICTED: cathepsin W-like [Equus caballus]
          Length = 373

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 156/355 (43%), Gaps = 63/355 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E F  F ++  R Y++  E   R + F ++  +             +G S FSD + EE 
Sbjct: 40  EVFTLFQIQYNRSYSSPAEYAHRLDIFARNLAQAQRLQEDDLGTAEFGVSPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 175
               G       + R  A    V + +   + +  VP   DW+K   V     +Q  C  
Sbjct: 100 GQLYG-------HRRAAAGAPHVGRKVESEKWEKTVPQTCDWQKAAGVISSVKNQEMCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  +AI   + VE S  QL++C +  +
Sbjct: 153 CWAMAAAGN-----------------------IEALWAITYHQSVEVSIQQLLDCDRCGN 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  +   + +GL SEKDYP++  + +  +C   K KV     +DF+     E
Sbjct: 190 GCKGGFVWDAFLTVLNNSGLASEKDYPFR-GDAKPHRCQAKKPKVAWI--QDFIRLPEDE 246

Query: 295 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--- 350
             + + L  +GP++V +N  L+  Y    I+    TC P  L H+VLLVG+G   ++   
Sbjct: 247 QKIAEYLATHGPITVTINMKLLQQYQKGVIKATPTTCDPQHLDHSVLLVGFGGGKSVEGR 306

Query: 351 ---------------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                           YW+++NSWG    +EG+F++ RG+N CGI + A  A +D
Sbjct: 307 RPGAVSSQSRPRRSSSYWILKNSWGAKWGEEGYFRLHRGSNTCGITKYALTALVD 361


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 31/246 (12%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P A DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
           +GE   C + K  V    TG   +     + +KK +   GP+SV +++        +   
Sbjct: 210 DGE---CRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGV 266

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQI 383
            ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI   
Sbjct: 267 YDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQ 326

Query: 384 AGYATI 389
           A Y  +
Sbjct: 327 ASYPLV 332


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 158/365 (43%), Gaps = 51/365 (13%)

Query: 44  VVARVDTLAIEGSLTFDNENILET-FKAFIVKRGRQYANDEEIK------------ERFE 90
           +V   + L  +  L F N+   E  ++ F     R Y   EE++            E   
Sbjct: 19  MVPMTNILRPDTILRFPNQVPFEKLWQDFKTVHERNYGETEEMQRKEVFRNNLKKIEMHN 78

Query: 91  YFKQDGHKKHERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKD 149
           Y    G K   R G ++F+D   +E      GF+ + RT       R+ +    +     
Sbjct: 79  YLHSQG-KSSYRMGINQFADMEVKEFASVVNGFRMNNRT-----KVRDHLHSHYISPAIP 132

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +P   DWRK+    P  DQ  CGSCW+FS  G                        LE
Sbjct: 133 VSLPAEVDWRKEGYVTPIKDQGHCGSCWSFSTTGA-----------------------LE 169

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN 266
           GQ+  KTGKLV  S+  L++C+     +GC+G   + + +Y     G ++E  YPY+ A+
Sbjct: 170 GQHFRKTGKLVSLSEQNLIDCSTSYGNNGCNGGVMDYAFQYIKDNDGDDTEDSYPYEAAD 229

Query: 267 GEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK 325
           G    C + K  V    TG   L     E MK+ +   GP+SV +++             
Sbjct: 230 G---PCRFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDASHTSFQMYQSGVY 286

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
           ++  C P  L H VL+VGYG +    YWLV+NSWG    DEG+ K+ R  NN CGI  +A
Sbjct: 287 DEVECDPEGLDHGVLVVGYGTELGQDYWLVKNSWGTKWGDEGYIKMSRNKNNQCGISSMA 346

Query: 385 GYATI 389
            Y  +
Sbjct: 347 SYPLV 351


>gi|118123|sp|P25782.1|CYSP2_HOMAM RecName: Full=Digestive cysteine proteinase 2; Flags: Precursor
 gi|11053|emb|CAA45128.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 323

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 161/387 (41%), Gaps = 84/387 (21%)

Query: 20  AVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 79
           AV  LCGVA     PS                              E FK    K GRQY
Sbjct: 4   AVLFLCGVALAAASPSW-----------------------------EHFKG---KYGRQY 31

Query: 80  ANDEEIKERFEYFKQDG------HKKHER------YGTSEFSDRSPEEILCKTGFKWSER 127
            + EE   R   F+Q+       +KK+E          ++F D + EE            
Sbjct: 32  VDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEF---------NA 82

Query: 128 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSN 187
             +  +  R     +    ++ GP     DWR K    P  DQ  CGSCWAFS  G    
Sbjct: 83  VMKGNIPRRSAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTGS--- 139

Query: 188 YLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPS 245
                               LEGQ+ +KTG L+  ++ QLV+C++     GC+G +   +
Sbjct: 140 --------------------LEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDA 179

Query: 246 IEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKY 303
            +Y     G+++E  YPY+  +G    C +D + V           +GSET +++ +   
Sbjct: 180 FDYIKANNGIDTEAAYPYEARDG---SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDI 236

Query: 304 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 363
           GP+SV +++        +     + +CSP  L HAVL VGYG +    +WLV+NSW    
Sbjct: 237 GPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSW 296

Query: 364 PDEGFFKIERG-NNACGIEQIAGYATI 389
            D G+ K+ R  NN CGI  +A Y  +
Sbjct: 297 GDAGYIKMSRNRNNNCGIATVASYPLV 323


>gi|3097321|dbj|BAA25899.1| Bd 30K [Glycine max]
 gi|84371705|gb|ABC56139.1| 34 kDa maturing seed protein [Glycine max]
 gi|195957142|gb|ACG59282.1| major allergen Gly m Bd 30K [Glycine max]
 gi|223452512|gb|ACM89583.1| maturing seed protein [Glycine max]
 gi|226432468|gb|ACO55749.1| Gly m Bd 30K allergen [Glycine max]
 gi|320090153|gb|ADW08728.1| P34 allergen [Glycine max]
 gi|320090155|gb|ADW08729.1| P34 allergen [Glycine max]
 gi|320090157|gb|ADW08730.1| P34 allergen [Glycine max]
 gi|320090159|gb|ADW08731.1| P34 allergen [Glycine max]
          Length = 379

 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 161/344 (46%), Gaps = 54/344 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKH---ERYGTSEFSDRSPEEI 116
           F+ +  + GR Y N EE  +R E FK +         ++K     R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNLNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CGS 
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGSG 159

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E  +AI TG LV  S+ +LV+C ++  G
Sbjct: 160 WAFSATG-----------------------AIEAAHAIATGDLVSLSEQELVDCVEESEG 196

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG-- 292
           C   +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L  +   
Sbjct: 197 CYNGWHYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDES 253

Query: 293 --SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVGYG  D
Sbjct: 254 TESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSAD 312

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 388
            + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 313 GVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356


>gi|194352748|emb|CAQ00102.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 140/345 (40%), Gaps = 63/345 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F AF+ + G++Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 50  FAAFVRRHGKEYSGPEEYARRLRVFAANVARAAAHQALDPGARHGVTPFSDLTREEFEAR 109

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG   +                   EV     +P ++DWR K        Q  CGSCWA
Sbjct: 110 LTGLVGAGDVLRSARRMPAAAPATEEEVAA---LPASFDWRDKGAVTDVKMQGVCGSCWA 166

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 234
           FS  G                        +EG   + TGKL++ S+ QLV+C   C    
Sbjct: 167 FSTTGA-----------------------VEGANFVATGKLLDLSEQQLVDCDHTCDAVA 203

Query: 235 -----SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                SGC G     +  Y     GL  +  YPY  A G    C +D+ KV +       
Sbjct: 204 KTECNSGCSGGLMTNAYRYLMSSGGLMEQAAYPYTGAQG---PCRFDRGKVAVRVANFTA 260

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG 345
                + M+  L + GPL+V LN+  +  Y G    P+      C    + H VLLVGYG
Sbjct: 261 VPLDEDQMRAALVRGGPLAVGLNAAFMQTYVGGVSCPL-----ICPRAMVNHGVLLVGYG 315

Query: 346 KQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +          PYWL++NSWG    + G++K+ RG N CG++ +
Sbjct: 316 ARGFSALRLGYRPYWLIKNSWGAQWGEGGYYKLCRGRNVCGVDSM 360


>gi|28192371|gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
          Length = 360

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 148/333 (44%), Gaps = 51/333 (15%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE---RYGTSEFSDRSPEEILCKTGF 122
           F  + G++Y + EEIK+RFE F  +      H K     + G +EF+D            
Sbjct: 64  FAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTD-----------L 112

Query: 123 KWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
            W E   +R+ A +      K  ++V  +  +P+   WR+  +  P  +Q  CGSCW FS
Sbjct: 113 TWDEFRRDRLGAAQNCSATTKGNLKV-TNVVLPETKGWREAGIVSPVKNQGKCGSCWTFS 171

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCD 238
             G                        LE  Y+   GK +  S+ QLV+CA   +  GC+
Sbjct: 172 TTGA-----------------------LEAAYSQAFGKGISLSEQQLVDCAGAFNNFGCN 208

Query: 239 GCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMK 297
           G     + EY     GL++E+ YPY   NG   K + +   VK+    + +     + +K
Sbjct: 209 GGLPSQAFEYIKSNGGLDTEEAYPYTGKNG-LCKFSSENVGVKVIDSVN-ITLGAEDELK 266

Query: 298 KILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
             +    P+S+          Y        +   +P D+ HAVL VGYG ++ +PYWL++
Sbjct: 267 YAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGVENGVPYWLIK 326

Query: 357 NSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 327 NSWGADWGDNGYFKMEMGKNMCGIATCASYPVV 359


>gi|7242888|dbj|BAA92495.1| cysteine protease [Vigna mungo]
          Length = 364

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 147/350 (42%), Gaps = 71/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKK--HER------YGTSEFSDRSPE 114
           N    F  F  K G+ YA  EE   RF  FK +  +   H +      +G ++FSD +  
Sbjct: 45  NAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRRARLHAQLDPSAVHGVTKFSDLTAA 104

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E          +R +  +             +     +P  +DWR K       DQ ACG
Sbjct: 105 EF---------QRQFLGLKPLGLPANAQKAPILPTNNLPKDFDWRDKGAVTNVKDQGACG 155

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG+LV  S+ QLV+C   C
Sbjct: 156 SCWSFSTTG-----------------------ALEGAHFLATGELVSLSEQQLVDCDHVC 192

Query: 235 ---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                    SGC+G     + EY   AG ++ E+DYPY    G    C +DKSK+     
Sbjct: 193 DPEEYGACDSGCNGGLMNNAFEYILGAGGVQREEDYPYA---GRDSSCKFDKSKIAASVA 249

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y G           PY     L H V 
Sbjct: 250 NYSVISLDEDQIAANLVKNGPLAVGINAVYMQTYIGG-------VSCPYICAKRLDHGVQ 302

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           +VGYG+           PYW+++NSWG    + G++KI RG NACG++ +
Sbjct: 303 IVGYGESGYAPIRFKEKPYWIIKNSWGESWGENGYYKICRGQNACGVDSM 352


>gi|440907378|gb|ELR57532.1| Cathepsin W [Bos grunniens mutus]
          Length = 382

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 160/364 (43%), Gaps = 72/364 (19%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E F+ F ++  R Y N  E   R + F Q+  K             +G ++FSD + EE 
Sbjct: 40  EVFRLFQMQYNRSYPNPAEYARRLDIFAQNLAKAQRLQEEDLGTAEFGVTQFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
           +   G   S+   E +   R+   +   E E     P   DWRK        DQ  C  C
Sbjct: 100 VQLYG---SQVAGEALGVSRKVGSEEWGESE-----PRTCDWRKVGPISLVRDQRNCNCC 151

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS--------QLV 228
           WA + AG                        +E  +AIK    VE S          +L+
Sbjct: 152 WAMAAAGN-----------------------IEALWAIKFRHFVEVSVQRMAGGRGWELL 188

Query: 229 ECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +C +  +GC G F ++  +   + +GL SEKDYP+ + +G+  +C   K K K+   +DF
Sbjct: 189 DCDRCGNGCRGGFVWDAFLTVLNNSGLASEKDYPF-DGSGKTHRCLAKKYK-KVAWIQDF 246

Query: 288 LHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 346
           +     E +M + L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK
Sbjct: 247 IILQACEQSMARHLATEGPITVTINMTLLQQYQKGVIKATPTTCDPTQVDHSVLLVGFGK 306

Query: 347 --------------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
                               + ++ YW ++NSWGP   +EG+F++ RG+N CGI +    
Sbjct: 307 TKSGEGRQGKAASFGSYARPRRSMAYWTLKNSWGPQWGEEGYFRLHRGSNTCGITKFPVT 366

Query: 387 ATID 390
           A ++
Sbjct: 367 ARVE 370


>gi|440792185|gb|ELR13413.1| cathepsin L, putative [Acanthamoeba castellanii str. Neff]
          Length = 331

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 153/344 (44%), Gaps = 60/344 (17%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPE 114
           I E F AF+ + G+ YA+ EE ++RF  F Q+          ++   ++G ++F+D S E
Sbjct: 30  IREQFNAFVQRYGKSYASAEEAEQRFAIFTQNLAETAALNIKYEGKTQFGITKFADMSQE 89

Query: 115 E-----ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAG 168
           E     ++       +E+ Y        K E            P  +DWR K  V  P  
Sbjct: 90  EFQSRVLMSNPPPPPTEKPYRG-----PKFEGFT--------APSTFDWRNKPGVVTPVY 136

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           DQ  CGSCWAFS                           +E Q+A+   KL   S  Q+V
Sbjct: 137 DQGQCGSCWAFSATEN-----------------------IESQWALAGHKLTGLSMQQIV 173

Query: 229 ECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
           +C+    GC G F   + +Y   A GL++  +YPY    G    CA+ +S+V  K+ +  
Sbjct: 174 DCSWWDDGCGGGFPSYAYDYVIDAPGLDALANYPYTAVGG---SCAFKESQVVAKISSWT 230

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
                +    M   L ++GP+SV ++++    Y G   R +   C    + H VL VGY 
Sbjct: 231 YTTTDSNEHQMANYLAQHGPISVCVDAESWPSYTGGVYRAS--ACGT-SIDHCVLAVGYN 287

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
              N PYW++RNSWG     EG+  +E G +AC + ++   A I
Sbjct: 288 LTANPPYWIIRNSWGTSWGLEGYMHLEFGTDACAVAEMTTSAII 331


>gi|211909240|gb|ACJ12893.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + EY  Q GLE+E  YPY+   G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   LH      +K ++   GP +V ++  SD +   +G      
Sbjct: 204 --CRYNRQLGVAKVTGYYTLHSGNEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|211909242|gb|ACJ12894.1| cathepsin L1D [Fasciola hepatica]
          Length = 326

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + EY  Q GLE+E  YPY+   G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCGGGLMENAYEYLKQFGLETESSYPYRAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   LH      +K ++   GP +V ++  SD +   +G      
Sbjct: 204 --CRYNRQLGVAKVTGYYTLHSGNEAGLKSLVGSEGPAAVAVDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|17569349|ref|NP_509408.1| Protein R09F10.1 [Caenorhabditis elegans]
 gi|351061560|emb|CCD69414.1| Protein R09F10.1 [Caenorhabditis elegans]
          Length = 383

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 43/326 (13%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHER-----YGTSEFSDRSPEEIL 117
           + F  FI+K  R+Y + EE + R++ F ++      + ER        +EF+D + EE+ 
Sbjct: 80  QMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV-PDAWDWRKKNVTGPAGDQAACGSC 176
                   E  Y +   D  K E   +E    G + P + DWR++    P  +Q  CGSC
Sbjct: 140 KMV----QENKYTKYDFDTPKFEGSYLET---GVIRPASIDWREQGKLTPIKNQGQCGSC 192

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAF+                           +E Q AIK GKLV  S+ ++V+C  + +G
Sbjct: 193 WAFATVAS-----------------------VEAQNAIKKGKLVSLSEQEMVDCDGRNNG 229

Query: 237 CDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETM 296
           C G +   ++++  + GLESEK+YPY     +  +C   ++  ++F     +  N  E +
Sbjct: 230 CSGGYRPYAMKFVKENGLESEKEYPYSALKHD--QCFLKENDTRVFIDDFRMLSNNEEDI 287

Query: 297 KKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWL 354
              +   GP++  +N    ++ Y       + E C+   +G HA+ ++GYG +    YW+
Sbjct: 288 ANWVGTKGPVTFGMNVVKAMYSYRSGIFNPSVEDCTEKSMGAHALTIIGYGGEGESAYWI 347

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGI 380
           V+NSWG      G+F++ RG N+CG+
Sbjct: 348 VKNSWGTSWGASGYFRLARGVNSCGL 373


>gi|33622213|ref|NP_891858.1| cathepsin [Cryptophlebia leucotreta granulovirus]
 gi|33569322|gb|AAQ21608.1| cathepsin [Cryptophlebia leucotreta granulovirus]
          Length = 332

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 50/348 (14%)

Query: 48  VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--------KK 99
           V   +   S+ ++ E   + F +F+ +  + Y  +EE   +F+ FK +           K
Sbjct: 10  VSAFSFIESVIYNLEQSEKLFDSFVKQYNKTYLTEEERMIKFDNFKNNLRIINEKNRGSK 69

Query: 100 HERYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV--PDAW 156
           H  +  +++SD +  ++L   TGFK   +        +E     ++E++++  V  P+ +
Sbjct: 70  HAVFDINKYSDLNKNDLLRHTTGFKLGLKKNYSFTTVKEC---GVVEIKEEPQVLLPETF 126

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K+   P  +Q  CGSCWAFS  G                        +E  Y IK 
Sbjct: 127 DWRDKHGVTPVKNQLICGSCWAFSTIGN-----------------------IESLYNIKY 163

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ--AGLESEKDYPYKNANGEKFKCAY 274
            K+++ S+  L+ C    +GC+G     ++E   Q   G+ SE++ PY    G    C  
Sbjct: 164 DKVIDLSEQHLINCDLVNNGCNGGLMHWALENILQEGGGVVSEENDPYY---GLDSVCKK 220

Query: 275 DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPY 333
              ++ +   K ++  N ++ +K++L   GP+SV ++ SD+I+  +G       + C   
Sbjct: 221 TPWELNISGCKRYILQNENK-LKELLVVNGPISVAIDVSDVINYKSGIA-----DICENN 274

Query: 334 D-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           + L HAVLLVGYG+ D +PYW+++NSWG    ++GFF+I+R  N+CG+
Sbjct: 275 NGLNHAVLLVGYGEYDEVPYWILKNSWGIEWGEDGFFRIQRNKNSCGL 322


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 148/346 (42%), Gaps = 64/346 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F AF+ + GR+Y+  +E   R   F                 R+G + FSD + EE   +
Sbjct: 60  FAAFVRRHGRRYSGPKEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 119

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG +        +            EV +   +P ++DWR K        Q ACGSCWA
Sbjct: 120 LTGLRAGGDVQRLMSGVPAAPPASKEEVAR---LPASFDWRDKGAVTGVKTQGACGSCWA 176

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--- 235
           FS  G                        +EG   + TG+LV+ S+ QLV+C   CS   
Sbjct: 177 FSTTGA-----------------------VEGANFLATGELVDLSEQQLVDCDHTCSAVA 213

Query: 236 ------GCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
                 GC G     +  Y  ++G L  +  YPY  A G    C +D ++V +       
Sbjct: 214 QNECNNGCAGGLMTNAYSYLMESGGLMEQSAYPYTGAAG---PCRFDPTQVAVRVANFTA 270

Query: 289 HFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGY 344
              G E  ++  L + GPL+V LN+  +  Y G    P+      C    + H VLLVGY
Sbjct: 271 VPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPL-----ICPRAWVNHGVLLVGY 325

Query: 345 GKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           G +          PYW+++NSWG    ++G++++ RG+N CG++ +
Sbjct: 326 GARGFAALRLGYRPYWIIKNSWGKQWGEQGYYRLCRGSNVCGVDSM 371


>gi|172050735|gb|ACB70169.1| cathepsin H transcript variant 3 [Sus scrofa]
          Length = 251

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 121/249 (48%), Gaps = 44/249 (17%)

Query: 150 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           GP P + DWRKK N   P  +Q +CGSCW FS  G                        L
Sbjct: 30  GPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGA-----------------------L 66

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
           E   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPYK  
Sbjct: 67  ESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK-- 124

Query: 266 NGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV---LLNSDLIHD--- 317
            G+   C +   K   F  KD   +  N  E M + +  Y P+S    + N  L++    
Sbjct: 125 -GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGI 182

Query: 318 YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA 377
           Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N 
Sbjct: 183 YSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNM 237

Query: 378 CGIEQIAGY 386
           CG+   A Y
Sbjct: 238 CGLAACASY 246


>gi|28932706|gb|AAO60047.1| midgut cysteine proteinase 4 [Rhipicephalus appendiculatus]
          Length = 345

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 48/296 (16%)

Query: 105 TSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
            + F+D +P+E++   TG+K             +++ ++ +     G  P+  +WR+   
Sbjct: 87  VNHFADMTPDEVVANYTGYK---------PPSAQQLAEIPLYAPLFGDTPEFIEWRENGF 137

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P  +Q  CGSCWAFS  G                        LEGQ   +T +L+  S
Sbjct: 138 VTPVKNQGQCGSCWAFSSTGA-----------------------LEGQVFKRTRRLISLS 174

Query: 224 KSQLVECAKQ---CSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKS-- 277
           +  L++CA Q    +GC+G     + +Y   AG L++E  YPY+   G  F+C +  S  
Sbjct: 175 EQNLMDCAGQRYGNNGCNGGQMPGAFQYVQDAGGLDTEARYPYRQ--GTNFQCQFSNSFE 232

Query: 278 -KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD---LIHDYNGTPIRKNDETCSPY 333
            +     G   +       ++  +   GP+S+ +N+     +   NG      +  C P 
Sbjct: 233 ARRVSVNGHTRVPPRNERVLQDAVANVGPISIAINASPQTFMFYKNGI---YGEPNCDPR 289

Query: 334 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            L HAVLLVGYG++  +PYW+V+NSWGP   + G+ KI R  N CG+ Q   +  +
Sbjct: 290 GLNHAVLLVGYGEERGVPYWIVKNSWGPGWGEGGYIKILRNRNVCGMSQDPSFPNL 345


>gi|21218381|gb|AAM44058.1|AF510740_1 cathepsin L1 [Schistosoma japonicum]
          Length = 317

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 151/343 (44%), Gaps = 55/343 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRS 112
           EN+ E +  F +   +QY ++ + ++RF  FK +  K       ER    YG + +SD +
Sbjct: 14  ENVGEMYAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLT 72

Query: 113 PEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            +E   +T     W   +    +  R +V          G +P+ +DWR+K       +Q
Sbjct: 73  TDE-FSRTHLTAPWRASSKRNTIPPRREV----------GDIPNNFDWREKGAVTEVKNQ 121

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C
Sbjct: 122 GMCGSCWAFSTTGN-----------------------IESQWFRKTGKLLSLSEQQLVDC 158

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
                GC+G    PS  Y       GL  E +YPY   N    KC      V  +     
Sbjct: 159 DSLDDGCNGGL--PSNAYESIIRMGGLMLEDNYPYDAKNE---KCHLKVGNVAAYINSSV 213

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-K 346
                   +   LY +  +SV +N+ L+  Y           CS Y L HAVLLVGYG  
Sbjct: 214 NLTQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHAVLLVGYGVS 273

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           + N P+W+V+NSWG    ++G+F++ RG+  CGI   A  A I
Sbjct: 274 EKNEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINTGATSALI 316


>gi|18414611|ref|NP_567489.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|2244977|emb|CAB10398.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|7268368|emb|CAB78661.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|14517442|gb|AAK62611.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22136546|gb|AAM91059.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22530956|gb|AAM96982.1| cysteine proteinase [Arabidopsis thaliana]
 gi|23397184|gb|AAN31875.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|110740834|dbj|BAE98514.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|332658313|gb|AEE83713.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 373

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 172/400 (43%), Gaps = 80/400 (20%)

Query: 17  LIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILET---FKAFIV 73
           LI A  L   + S +    ++  +TD  V  +  +  E     ++E +L     F  F  
Sbjct: 9   LIAATLLAGSLGSTV----ISGEVTDGFVNPIRQVVPEE----NDEQLLNAEHHFTLFKS 60

Query: 74  KRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCKTGFKWS 125
           K  + YA   E   RF  FK +  +            +G ++FSD +P+E   K  F   
Sbjct: 61  KYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEFRRK--FLGL 118

Query: 126 ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKF 185
           +R   R+  D +        +     +P  +DWR++    P  +Q  CGSCW+FS  G  
Sbjct: 119 KRRGFRLPTDTQTAP-----ILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGA- 172

Query: 186 SNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------SG 236
                                 LEG + + T +LV  S+ QLV+C  +C         SG
Sbjct: 173 ----------------------LEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSG 210

Query: 237 CDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C G     + EY  +A GL  E+DYPY     +   C +DKSK+        +  +  + 
Sbjct: 211 CSGGLMNNAFEYALKAGGLMKEEDYPYTGR--DHTACKFDKSKIVASVSNFSVVSSDEDQ 268

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG------ 345
           +   L ++GPL++ +N+  +  Y G           PY       H VLLVG+G      
Sbjct: 269 IAANLVQHGPLAIAINAMWMQTYIGG-------VSCPYVCSKSQDHGVLLVGFGSSGYAP 321

Query: 346 -KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 383
            +    PYW+++NSWG +  + G++KI RG +N CG++ +
Sbjct: 322 IRLKEKPYWIIKNSWGAMWGEHGYYKICRGPHNMCGMDTM 361


>gi|225444726|ref|XP_002278624.1| PREDICTED: thiol protease aleurain-like isoform 1 [Vitis vinifera]
 gi|147826441|emb|CAN62278.1| hypothetical protein VITISV_031382 [Vitis vinifera]
 gi|297738562|emb|CBI27807.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 148/341 (43%), Gaps = 57/341 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEIL 117
            +F +F  + G+ Y   +EIK RFE F ++       ++K   Y    ++F+D       
Sbjct: 61  HSFASFAHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFAD------- 113

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGS 175
               + W E    R+ A  +     L    K  D  +P+  DWR+  +  P  DQ  CGS
Sbjct: 114 ----WTWEEFRRHRLGA-AQNCSATLKGNHKLTDVILPETKDWREDGIVSPIKDQGHCGS 168

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CW FS  G                        LE  YA   GK +  S+ QLV+CA   +
Sbjct: 169 CWTFSTTGA-----------------------LEAAYAQAFGKGISLSEQQLVDCAGAFN 205

Query: 236 --GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFN 291
             GC G     + EY  +  GL++E+ YPY   +G    C +    + +       +   
Sbjct: 206 NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGLDG---TCKFSSENIGVQVLDSVNITLG 262

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             + +K  +    P+SV    +++HD   Y            +P D+ HAVL VGYG +D
Sbjct: 263 AEDELKHAVAFVRPVSVAF--EVVHDFRFYKKGVYTSGTCGSTPMDVNHAVLAVGYGVED 320

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            + YWL++NSWG    D G+FK+E G N CG+   + Y  +
Sbjct: 321 GVAYWLIKNSWGENWGDNGYFKMELGKNMCGVATCSSYPVV 361


>gi|443698586|gb|ELT98517.1| hypothetical protein CAPTEDRAFT_128252 [Capitella teleta]
          Length = 324

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 164/372 (44%), Gaps = 58/372 (15%)

Query: 22  FLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYAN 81
            L C +A+ L  P + D   D++     T     S T+  E   E  + FI +R     N
Sbjct: 1   MLACCIAATLASPLVFDEALDEMWTLFKTTH---SKTYATE--AEDMRRFIWERHLNMIN 55

Query: 82  DEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 141
              I+        D  K     G +E+ D +  E    +G+K ++ +      + E ++ 
Sbjct: 56  QHNIE-------ADLGKHTFSLGMNEYGDLTQHEYAAMSGYKMAKSSVGSSFLEPENLQ- 107

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
                     VP   DWR+K    P  +Q  CGSCWAFS  G                  
Sbjct: 108 ----------VPKTVDWREKGYVTPVKNQGQCGSCWAFSSTGS----------------- 140

Query: 202 LIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEK 258
                 LEGQ   KTG+L   S+  LV+C++     GC G   + +  Y  +  G++SEK
Sbjct: 141 ------LEGQVFRKTGRLPSISEQNLVDCSRDEGNMGCSGGLMDNAFTYIKKNMGIDSEK 194

Query: 259 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDLI 315
            YPY+  +GE   C Y KS   + T   F+   +G ET ++  +   GP+SV ++ S   
Sbjct: 195 SYPYEAVDGE---CRYKKSD-SVTTDSGFVDIPHGDETALRTAVASVGPVSVAIDASHTS 250

Query: 316 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
             +  T +   +  CS   L H VL+VGYG ++   YWLV+NSWG    + G+ K+ R +
Sbjct: 251 FQFYKTGVY-TEANCSSTQLDHGVLVVGYGVENGQDYWLVKNSWGASWGEAGYIKLARNH 309

Query: 376 -NACGIEQIAGY 386
            N CGI   A Y
Sbjct: 310 GNQCGIASQASY 321


>gi|440906717|gb|ELR56946.1| Cathepsin K [Bos grunniens mutus]
          Length = 338

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 85  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSIDYRKKGYV 136

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 137 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 173

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 174 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKC 230

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L            DE C+  +L HAVL V
Sbjct: 231 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAV 290

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 291 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 338


>gi|343473977|emb|CCD14279.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 150/342 (43%), Gaps = 49/342 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAF++ G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 DSSWAFTVIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC   F + + ++    +   + +E+ YPY +  G    C  +KS KV     +D +H
Sbjct: 185 DLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPAC--NKSGKVVGANIRDHVH 242

Query: 290 -FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY    
Sbjct: 243 ILDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVL----TSCISKEVNSAALLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             PYW+++NSWG    +EG+ +IE+G N C ++     A + 
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAVVS 340


>gi|261328618|emb|CBH11596.1| cysteine peptidase precursor, (fragment) [Trypanosoma brucei
           gambiense DAL972]
          Length = 404

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 142/325 (43%), Gaps = 45/325 (13%)

Query: 76  GRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 127
           G+ Y + +E   RF  F+        Q     +  +G + FSD + EE      F+   R
Sbjct: 3   GKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREE------FRARYR 56

Query: 128 TYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSN 187
                 A  +K  +  + V   G  P A DWR+K    P  DQ  CGSCWAF        
Sbjct: 57  NGASYFAAAQKRLRKTVNVTT-GRAPAAVDWREKGAVTPMKDQGQCGSCWAF-------- 107

Query: 188 YLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE 247
           Y +               G +EGQ+ +    LV  S+  LV C     GC G   + +  
Sbjct: 108 YSI---------------GNIEGQWQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFN 152

Query: 248 Y---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 304
           +   ++   + +E  YPY + NGE+ +C  +  ++              + +   L + G
Sbjct: 153 WIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENG 212

Query: 305 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 364
           PL++ +++    DYNG  +     +C+   L H VLLVGY    N PYW+++NSW  +  
Sbjct: 213 PLAIAVDATSFMDYNGGILT----SCTSEQLDHGVLLVGYNDNSNPPYWIIKNSWSNMWG 268

Query: 365 DEGFFKIERGNNACGIEQIAGYATI 389
           ++G+ +IE+G N C + Q    A +
Sbjct: 269 EDGYIRIEKGTNQCLMNQAVSSAVV 293


>gi|157862759|gb|ABV90502.1| cathepsin L, partial [Fasciola gigantica]
          Length = 280

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 62  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGT-----------------------MEGQ 98

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+      GC G   E + EY  Q GLE+E  YPY+   G+ 
Sbjct: 99  YMKNQRTSISFSEQQLVDCSGPWGNMGCSGGLMENAYEYLKQFGLETESSYPYRAVEGQ- 157

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      +K ++   GP +V ++  SD +   +G      
Sbjct: 158 --CRYNRQLGVVKVTGYYTVHSGSEVGLKNLVGAEGPAAVAVDVESDFMMYRSGI---YQ 212

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP+ L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 213 SQTCSPFGLNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASMA 271


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P A DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +GE   C + K  V   T   ++    GSE  +KK +   GP+SV +++        +  
Sbjct: 210 DGE---CRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 QASYPLV 332


>gi|323451241|gb|EGB07119.1| hypothetical protein AURANDRAFT_54023 [Aureococcus anophagefferens]
          Length = 377

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 147/353 (41%), Gaps = 62/353 (17%)

Query: 60  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSE---------FSD 110
           D E + E F  F+ K  + Y   EE   R   F Q+     E    +E         F+D
Sbjct: 57  DVEAVHEAFMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFAD 116

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE            +Y+++ +  +  +        D   P A DWR + V     +Q
Sbjct: 117 WTAEEFA----------SYQKLHSRPKPSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQ 166

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            +CGSCW FS                           +EG  A KTGKLV  S+  LV+C
Sbjct: 167 GSCGSCWTFSTVVS-----------------------IEGAAARKTGKLVTLSEQNLVDC 203

Query: 231 AKQ---------CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSK 278
            K+         C GC G   + + +Y       G+++E  Y Y   +G    CA+DK+ 
Sbjct: 204 VKKDQIDGGDECCMGCSGGLMDNAFDYIIKNQDGGIDTEASYGYTGKDG---TCAFDKAN 260

Query: 279 VKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLN-SDLIHDYNGTPIR-KNDETCS--PY 333
           V            G E  +   L   GP+S+ L+ S     Y+G  ++ ++   CS  P 
Sbjct: 261 VGATISNWTDVAVGDEVALADALANAGPVSIALDASKQWQLYSGGILKPRSILGCSSDPT 320

Query: 334 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
              H V +VGYG  D + YW +RNSWG    + G+ ++ERG NACG+   A Y
Sbjct: 321 HADHGVAIVGYGTDDGVDYWWIRNSWGTTWGESGYMRLERGVNACGVANFASY 373


>gi|256077195|ref|XP_002574893.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230782|emb|CCD77199.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 456

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 147/340 (43%), Gaps = 50/340 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 113
           N+ E +  F +K  +QY   +EI  RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETDEI--RFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 210

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 211 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 263

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C   
Sbjct: 264 GSCWAFSTTGN-----------------------VESQWFRKTGKLLSLSEQQLVDCDGL 300

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GL  E +YPY   N    KC      V ++        
Sbjct: 301 DDGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLT 355

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 349
                +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N
Sbjct: 356 QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKN 415

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 416 EPFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 455


>gi|33242882|gb|AAQ01145.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 163/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R   F+++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFIFEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSEVGDSDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CG CWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGPCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIPANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|394331818|gb|AFN27128.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+  LV C  + SG
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEHHLVSCHDKNSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +++G   +C+     V       ++    S
Sbjct: 188 CTGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGISLNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|332326589|gb|AEE42618.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 141/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+        + +E  YPY ++ G+  +C      V       ++    S
Sbjct: 188 CNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|195729975|gb|ACG50798.1| cathepsin L1 [Fascioloides magna]
          Length = 327

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 139/294 (47%), Gaps = 43/294 (14%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKN 162
           G ++F+D + EE   K  F+ S ++        E +    +  +  G  VP++ DWR   
Sbjct: 68  GLNQFTDMTFEEFKAKYLFEISPKS--------ELLSHSGISYQAKGNDVPESIDWRDYG 119

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
                 DQ  CGSCWAFS  G                        +EGQY  K    V F
Sbjct: 120 YVTEVKDQGQCGSCWAFSSTGA-----------------------MEGQYIKKFRTTVSF 156

Query: 223 SKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKS-KV 279
           S+ QLV+C +    SGC+G + E + EY  + GLE+E  YPY+  +     C Y+    V
Sbjct: 157 SEQQLVDCTRNYGNSGCNGGWMERAFEYLRRNGLETESSYPYRAVDDH---CRYESQLGV 213

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              TG    H     ++  ++   GP++V ++         + I ++ ETCS Y + HAV
Sbjct: 214 AKVTGYYTEHSGNEVSLMNMVGGEGPVAVAVDVQSDFSMYKSGIYQS-ETCSTYYVNHAV 272

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 392
           L VGYG +    YW+++NSWG    D+G+ +  R  NN CG   IA YA++ +V
Sbjct: 273 LAVGYGTESGTDYWILKNSWGSWWGDQGYIRFARNRNNMCG---IASYASVPMV 323


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 162/355 (45%), Gaps = 76/355 (21%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KH-ERYG---------TSEFSDRSPEE 115
           + AF  K G+ Y ++ E   R + + ++ HK  KH E+Y           +EF D    E
Sbjct: 27  WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNEFGDMLHHE 86

Query: 116 IL-CKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKNVTGPAGDQAA 172
            +  + GFK   R Y+    D+ +     +E E  +D  +P   DWR K    P  +Q  
Sbjct: 87  FVSTRNGFK---RNYK----DQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQGQ 139

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        LEGQ+  K+G +V  S+  LV C+ 
Sbjct: 140 CGSCWAFSATGS-----------------------LEGQHFRKSGSMVSLSEQNLVGCST 176

Query: 233 Q--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               +GC+G   + + +Y     G+++EK YPY   NG    C + KS V   T   F+ 
Sbjct: 177 DFGNNGCEGGLMDDAFKYIRANKGIDTEKSYPY---NGTDGTCHFKKSTVGA-TDSGFVD 232

Query: 290 FN-GSET-MKKILYKYGPLSVLLN---------SDLIHDYNGTPIRKNDETCSPYDLGHA 338
              GSET +KK +   GP+SV ++         SD ++D         +  C    L H 
Sbjct: 233 IKEGSETQLKKAVATVGPISVAIDASHESFQFYSDGVYD---------EPECDSESLDHG 283

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATIDVV 392
           VL+VGYG  +   YW V+NSWG    DEG+ ++ R   N CG   IA  A+I +V
Sbjct: 284 VLVVGYGTLNGTDYWFVKNSWGTTWGDEGYIRMSRNKKNQCG---IASSASIPLV 335


>gi|109940312|sp|Q5E968.2|CATK_BOVIN RecName: Full=Cathepsin K; Flags: Precursor
          Length = 329

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L            DE C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|332326587|gb|AEE42617.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+        + +E  YPY ++ G+  +C      V       ++    S
Sbjct: 188 CNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNXTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|385298943|gb|AFI60244.1| cysteine protease/senescence-enhanced 1, partial [Panicum virgatum]
          Length = 282

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/245 (33%), Positives = 120/245 (48%), Gaps = 35/245 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P+  DWR+  +  P  +Q  CGSCW FS  G                        LE  
Sbjct: 65  LPETKDWREDGIVSPVKNQGHCGSCWTFSTTGA-----------------------LEAA 101

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
           Y   TGK V  S+ QLV+CA   +  GC+G     + EY  H  GL++E+ YPYK  NG 
Sbjct: 102 YTQATGKPVSLSEQQLVDCAGAYNNFGCNGGLPSQAFEYIKHNGGLDTEESYPYKGVNG- 160

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYN--GTPIRK 325
              C +  S V +          G+E  +K  +    P+SV    ++I+ +    + +  
Sbjct: 161 --LCQFKASNVGVKVLDSVNITLGAENELKDAVGLVRPVSVAF--EVINGFRLYKSGVYT 216

Query: 326 NDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
           +D    +P D+ HAVL VGYG ++ +PYWL++NSWG    DEG+FK+E G N CG+   A
Sbjct: 217 SDHCGTTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCA 276

Query: 385 GYATI 389
            Y  +
Sbjct: 277 SYPIV 281


>gi|426216528|ref|XP_004002514.1| PREDICTED: cathepsin K [Ovis aries]
          Length = 330

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRTPDSVDYRKKGYV 128

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 129 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 165

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 166 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKC 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L            DE C+  +L HAVL V
Sbjct: 223 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAV 282

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330


>gi|77735825|ref|NP_001029607.1| cathepsin K precursor [Bos taurus]
 gi|59858469|gb|AAX09069.1| cathepsin K preproprotein [Bos taurus]
 gi|83638771|gb|AAI09854.1| Cathepsin K [Bos taurus]
 gi|296489554|tpg|DAA31667.1| TPA: cathepsin K [Bos taurus]
          Length = 334

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A R +    L   + +G  PD+ D+RKK   
Sbjct: 81  NHLGDMTSEEVVQKMTGLK--------VPASRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 132

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 133 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 169

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 170 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKC 226

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L            DE C+  +L HAVL V
Sbjct: 227 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAV 286

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 287 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 334


>gi|33242876|gb|AAQ01142.1| cathepsin [Branchiostoma lanceolatum]
          Length = 334

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 163/360 (45%), Gaps = 44/360 (12%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY 103
           ++  V ++A  G L  + E     ++ + ++ G+QY  + E   R    +++  K  E  
Sbjct: 5   ILGAVISMATAGVLPHNKE-----WEMWKLQHGKQYETEAEEYSRRFILEKNTVKIAEHN 59

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLM------EVEKDGPVPDAWD 157
             +     S    + K G    E  ++RI+    K+ K  +      + + +G +P + D
Sbjct: 60  IRASLGMHSYTLAMNKFGDMHHEEFHQRIMGGCLKIVKKPLLGSDVGDNDDNGTLPKSVD 119

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR  ++     DQ  CGSCWAFS  G                        LEGQ++ KTG
Sbjct: 120 WRNSHMVSEVKDQGECGSCWAFSTTGS-----------------------LEGQHSNKTG 156

Query: 218 KLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAY 274
           KLV+ S+ QLV+C+K     GC G   + + +Y     GL++E+ YPY   + +   C +
Sbjct: 157 KLVDLSEQQLVDCSKDFGNQGCGGGLMDQAFQYIKANGGLDTEESYPYTATDDK--PCKF 214

Query: 275 DKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D S V     G   +       +K+ +   GP+SV +++        +    ++  CS  
Sbjct: 215 DNSSVGATLVGYKDVKSGNEHALKRAVATVGPVSVAIDAGHESFQFYSSGVYDEPQCSTE 274

Query: 334 DLGHAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL VGYG  ++     +W+V+NSWGP   D+G+  + R  NN CGI   A Y  +
Sbjct: 275 QLDHGVLAVGYGAMNDNSHQAFWIVKNSWGPSWGDQGYIMMSRNKNNQCGIATSASYPLV 334


>gi|49456399|emb|CAG46520.1| CTSK [Homo sapiens]
          Length = 329

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 156/351 (44%), Gaps = 51/351 (14%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYAND--EEIKERFEYFKQ----DGHKKHERYGT---- 105
           SL    E IL+T      K  R+  N+  +EI  R  + K       H      G     
Sbjct: 13  SLALYPEEILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYE 72

Query: 106 ---SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
              +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK
Sbjct: 73  LAMNHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKK 124

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+ 
Sbjct: 125 GYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLN 161

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KV 279
            S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K 
Sbjct: 162 LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKA 218

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
               G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAV
Sbjct: 219 AKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAV 278

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           L VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 279 LAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|229596403|ref|XP_001009843.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225565321|gb|EAR89598.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 324

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 147/327 (44%), Gaps = 55/327 (16%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDG----HKKHERYGTSEFSDRSPEEILCKT 120
           ++ F+A++ K G ++A++ +++ R   F Q+         E  GT  F   +   I  K 
Sbjct: 33  VDEFQAWMHKYGFKFADEVQLQYRRSIFYQNKDLVEQLNSENNGT--FHTLNAFAIYTKD 90

Query: 121 GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFS 180
            F        ++    +K +K  +     G V  + DWR+KN   P  +Q  CGSCWAFS
Sbjct: 91  EFN-------QLFKGYQKRQKSHLIYSLKGDVAPSIDWRQKNAVTPVKNQGQCGSCWAFS 143

Query: 181 IAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGC 240
             G                        LEG YAI TG L  FS+ Q+V+C+K  +GC+G 
Sbjct: 144 TVGG-----------------------LEGAYAIATGNLTSFSEQQIVDCSKANAGCNGG 180

Query: 241 FFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN-GSETMKKI 299
              P+ +Y  Q G+E+E DYPYK  N    KCAYD SKV +F  K F+     S     I
Sbjct: 181 DLPPAYKYVVQNGIETEADYPYKGVNQ---KCAYDASKV-VFKPKSFVQVTPNSPDQLAI 236

Query: 300 LYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRN 357
                P+ + + +D      Y    I     T    +L H VL VGY        W+V+N
Sbjct: 237 ALNKEPVPICIEADQKAFQFYTSGIISSGCGT----NLDHCVLAVGYDADS----WIVKN 288

Query: 358 SWGPIGPDEGFFKIER----GNNACGI 380
           SWG    + G+ +I R    G   CGI
Sbjct: 289 SWGASWGENGYVRIARTTAKGPGVCGI 315


>gi|171948778|gb|ACB59246.1| cathepsin H [Sus scrofa]
          Length = 297

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 149/327 (45%), Gaps = 65/327 (19%)

Query: 83  EEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVA 134
           EE   R + F  +  K +         + G ++FSD S +EI  K  + WSE   +   A
Sbjct: 8   EEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHK--YLWSEP--QNCSA 63

Query: 135 DREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYL 193
            +         +   GP P + DWRKK N   P  +Q +CGSCW FS  G          
Sbjct: 64  TKGNY------LRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGA--------- 108

Query: 194 NHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFF---EPSIEY 248
                         LE   AI TGK++  ++ QLV+CA+  +  GC G        + EY
Sbjct: 109 --------------LESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPGLPSQAFEY 154

Query: 249 T-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGP 305
             +  G+  E  YPYK   G+   C +   K   F  KD   +  N  E M + +  Y P
Sbjct: 155 IRYNKGIMGEDTYPYK---GQDDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNP 210

Query: 306 LSV---LLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 359
           +S    + N  L++    Y+ T   K     +P  + HAVL VGYG+++ IPYW+V+NSW
Sbjct: 211 VSFAFEVTNDFLMYRKGIYSSTSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSW 265

Query: 360 GPIGPDEGFFKIERGNNACGIEQIAGY 386
           GP     G+F IERG N CG+   A Y
Sbjct: 266 GPQWGMNGYFLIERGKNMCGLAACASY 292


>gi|454101|gb|AAA82966.1| cathepsin H prepropeptide [Mus musculus]
          Length = 333

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 53/339 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGT-----SEFSDRSPEEILCK 119
           FK+++ +  + Y+   E   R + F  +  K    ++R  T     ++FSD S  EI  K
Sbjct: 33  FKSWMKQHQKTYS-SVEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEI--K 89

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             F WSE   +   A +         +   GP P + DWRKK NV  P  +Q AC SCW 
Sbjct: 90  HKFLWSEP--QNCSATKSNY------LRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWT 141

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 142 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQAFNNHG 178

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  G+  E  YPY    G+   C ++  K   F      +  N   
Sbjct: 179 CKGGLPSQAFEYILYNKGIMEEDSYPYI---GKDSSCRFNPQKAVAFVKNVVNITLNDEA 235

Query: 295 TMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            M + +  Y P+S    +  D +   +G    K+    +P  + HAVL VGYG+Q+ + Y
Sbjct: 236 AMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHK-TPDKVNHAVLAVGYGEQNGLLY 294

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
           W+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 295 WIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPIPQV 333


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 121/247 (48%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPYK  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYKAV 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +GE   C + K  V   T   ++    GSE  +KK +   GP+SV +++        +  
Sbjct: 210 DGE---CRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 QASYPLV 332


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 120/246 (48%), Gaps = 31/246 (12%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P A DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFSTTGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
           +GE   C + K  V    TG   +     + +KK +   GP+SV +++        +   
Sbjct: 210 DGE---CRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDASHSSFQLYSEGV 266

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQI 383
            ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI   
Sbjct: 267 YDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQ 326

Query: 384 AGYATI 389
           A Y  +
Sbjct: 327 ASYPLV 332


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 164/351 (46%), Gaps = 59/351 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK----------KHERYGTS--EFSDR 111
           +LE ++AF ++  ++Y ++ E   R + F ++ HK           H  Y  S  ++ D 
Sbjct: 25  VLEEWEAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDM 84

Query: 112 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF+ +     +   +R       +E + D  +P   DWR K    P  DQ
Sbjct: 85  LHHEFVSTMNGFRGNHTGGYK--NNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQ 142

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS                         G LEGQ   KTG+LV  S+  LV+C
Sbjct: 143 GQCGSCWAFSAT-----------------------GALEGQTFRKTGQLVSLSEQNLVDC 179

Query: 231 AKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +++   +GC+G   + + EY  +  G+++E+ YPY   + E  KC Y+  +      K F
Sbjct: 180 SRKFGNNGCNGGLMDNAFEYVKENGGIDTEESYPY---DAEDEKCHYN-PRAAGAEDKGF 235

Query: 288 LHFN-GSE-TMKKILYKYGPLSVLLNSDLIHD-----YNGTPIRKNDETCSPYDLGHAVL 340
           +    GSE  +KK +   GP+SV +  D  H+      +G  I   +  CSP  L H VL
Sbjct: 236 VDVREGSEHALKKAVATVGPVSVAI--DASHESFQFYSHGVYI---EPECSPEMLDHGVL 290

Query: 341 LVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +VGYG   D   YWLV+NSWG    D+G+ K+ R  +N CGI   A +  +
Sbjct: 291 VVGYGIDDDGTDYWLVKNSWGTTWGDQGYVKMARNRDNQCGIASSASFPLV 341


>gi|343470212|emb|CCD17026.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 150/342 (43%), Gaps = 49/342 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAF++ G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 DSSWAFTVIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC   F + + ++   ++   + +E+ YPY +  G    C  +KS KV      D +H
Sbjct: 185 DLGCRAGFMDTAFKWIVSSNNGNVFTEQSYPYASGGGNVPTC--NKSGKVVGANIDDHVH 242

Query: 290 -FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY    
Sbjct: 243 ILDNENAIAEWLAKKGPVAIAVDATSFQSYTGGVL----TSCISKEVNSAALLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             PYW+++NSW     +EG+ +IE+G N C +++    A + 
Sbjct: 299 KPPYWIIKNSWSKGWGEEGYIRIEKGTNQCRMKEYVSSAVVS 340


>gi|403367386|gb|EJY83513.1| Cathepsin L [Oxytricha trifallax]
          Length = 339

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 172/371 (46%), Gaps = 74/371 (19%)

Query: 40  ITDQVVARVDTLAIEG-----------SLTFDNENILETFKAFIVKRGRQYANDEEIKER 88
           IT  VV  V  +A+             ++    EN+   F  ++ K G+ Y   EE + R
Sbjct: 6   ITLAVVGTVAAIAVVALSEMPSSTSLYTMEVTQENV--DFANYLAKYGKSYGTKEEFQFR 63

Query: 89  FEYFKQD----GHKKHERYGT-----SEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
           F+ ++Q+     H       T     ++F+D +P E     G+K   +      A+ +  
Sbjct: 64  FQQYQQNMALIAHHNSNNENTFTLASNKFADYTPAEYKKLLGYKRMPK------ANAQYA 117

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
           E  L  V      PD+ DWR K    P  DQ  CGSCWAFS  G                
Sbjct: 118 EFDLTAV------PDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGS--------------- 156

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---SGCDGCFFEPSIEYTHQAGLES 256
                   LEG+ AI TG L  +S+ QLV+C        GC+G     +++Y+ +  LE 
Sbjct: 157 --------LEGRDAIATGTLQSYSEQQLVDCDYSTDGNQGCNGGDMGLAMDYSAKNPLEL 208

Query: 257 EKDYPYKNANGEKFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD- 313
           E DYPYK  +G   KC+Y  DK   K   G   +  N    +K  + + GP+SV + +D 
Sbjct: 209 ESDYPYKAIDG---KCSYKADKGHSK-NKGHTNVKQNSLPDLKAAIAQ-GPVSVAIEADT 263

Query: 314 -LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 372
            +   YNG  +  N ++C   +L H VL VGYG ++N PY++V+NSWGP   ++G+ +I 
Sbjct: 264 MVFQFYNGGIL--NSKSCGT-NLDHGVLAVGYGSENNKPYYIVKNSWGPSWGEQGYLRIA 320

Query: 373 R--GNNACGIE 381
           +  G   CGI+
Sbjct: 321 QVDGAGICGIQ 331


>gi|432114312|gb|ELK36240.1| Aryl hydrocarbon receptor nuclear translocator [Myotis davidii]
          Length = 897

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 38/287 (13%)

Query: 107 EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           +++ ++ EE++ K TG         R+     +    L   + +G  PD+ D+RKK    
Sbjct: 645 QYNSKTSEEVVQKMTGL--------RVPPSHSRSNDTLYIPDWEGKAPDSIDYRKKGYVT 696

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S  
Sbjct: 697 PVKNQGQCGSCWAFSSVG-----------------------ALEGQLMKKTGKLLNLSPQ 733

Query: 226 QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 283
            LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     
Sbjct: 734 NLVDCVSENDGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCR 790

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           G   +     + +KK + + GP+SV +++ L      +     DE C+  +L HAVL VG
Sbjct: 791 GYKEIPEGNEKALKKAVARVGPISVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAVG 850

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 851 YGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 897


>gi|115472081|ref|NP_001059639.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|27261016|dbj|BAC45132.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113611175|dbj|BAF21553.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|215693312|dbj|BAG88694.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 376

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 153/360 (42%), Gaps = 86/360 (23%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 120 -TGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
            TG           V D  +   M       E E  G +P ++DWR +        Q AC
Sbjct: 108 LTGLAAD-------VGDDVRRRPMPSAAPATEEEVSG-LPASFDWRDRGAVTDVKMQGAC 159

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EG   + TG L++ S+ QLV+C   
Sbjct: 160 GSCWAFSTTGA-----------------------VEGANFLATGNLLDLSEQQLVDCDHT 196

Query: 234 C---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-- 281
           C         SGC G     +  Y     GL  +  YPY  A G    C +D ++V +  
Sbjct: 197 CDAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQG---TCRFDANRVAVRV 253

Query: 282 --FT------GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETC 330
             FT      G D    +G   M+  L ++GPL+V LN+  +  Y G    P+      C
Sbjct: 254 ANFTVVAPPGGNDG---DGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VC 305

Query: 331 SPYDLGHAVLLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
               + H VLLVGYG++        + PYW+++NSWG    ++G++++ RG N CG++ +
Sbjct: 306 PRAWVNHGVLLVGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTM 365


>gi|332326581|gb|AEE42614.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 138/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G+   C      V       ++    S
Sbjct: 188 CGGGLMTQAFEWLLRNMNGTMXTEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIAVDASSFMSYXSGVL----TSCAGKXLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|394331735|gb|AFN27090.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|47076309|emb|CAD89795.1| putative cathepsin L protease [Meloidogyne incognita]
          Length = 383

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 153/338 (45%), Gaps = 41/338 (12%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTSEFSDRSPEEILCKTGFKW 124
           ++A+  K G+ Y N +E  ER   +   KQ   K    Y     S +  E  +    F  
Sbjct: 71  WQAYKEKHGKSYPNQDEDNERMLAYLSAKQFIEKHQRDYTEGRVSFQVGENHMADVPFNQ 130

Query: 125 SERT--YERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             +   ++R++ D   R+      +       +P++ DWR K +     +Q  CGSCWAF
Sbjct: 131 YRKLNGFKRLLGDAVTRKNASSTFLPPLNMYAIPESVDWRDKGLVTSVKNQGMCGSCWAF 190

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK----QCS 235
           S                         G LEGQ++ K G LV  S+  L++C K       
Sbjct: 191 SAT-----------------------GALEGQHSRKLGTLVSLSEQNLIDCTKGEPYGNM 227

Query: 236 GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGS 293
           GC+G   + + +Y     G+++E  YPYK  NG+  KC + +S V    TG   L     
Sbjct: 228 GCNGGLMDNAFQYIEDNKGVDTENSYPYKAKNGK--KCLFKRSNVGATDTGYVDLPSGDE 285

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD-NIPY 352
           + +K  +   GP+SV +++             ++E CSP +LGH VL+VGYG  D +  Y
Sbjct: 286 DKLKIAVATQGPISVAIDAGHRSFQLYAHGVYDEEACSPDNLGHGVLVVGYGTDDIHGDY 345

Query: 353 WLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           WLV+NSWG    + G+ ++ R  +N CGI   A Y  +
Sbjct: 346 WLVKNSWGEHWGENGYIRMSRNKDNQCGIASKASYPLV 383


>gi|351700981|gb|EHB03900.1| Cathepsin H [Heterocephalus glaber]
          Length = 334

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 155/344 (45%), Gaps = 63/344 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF-----KQDGHKKHE---RYGTSEFSDRSPEEILCK 119
           FK+++++  ++Y+  +E   R + F     K + H K     +   ++FSD S +EI  K
Sbjct: 34  FKSWMMQHQKEYST-KEYHHRQQIFASNWRKINAHNKGNHTFKMALNQFSDMSFDEI--K 90

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             + WSE   +   A +             GP P + DWRKK N      +Q ACGSCW 
Sbjct: 91  RKYLWSEP--QNCSATKSNY------FRGTGPYPTSVDWRKKGNFVSAVKNQGACGSCWT 142

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GK++  ++ QLV+CA+  +  G
Sbjct: 143 FSTTGA-----------------------LESAVAIASGKMLSLAEQQLVDCAQDFNNHG 179

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH--FNGS 293
           C G     + EY  +  G+  E  YPY+  +G    C +   K   F  KD ++   N  
Sbjct: 180 CQGGLPSQAFEYILYNKGIMGEDTYPYEGKDGH---CRFQPQKAIAFV-KDIVNITLNDE 235

Query: 294 ETMKKILYKYGPLSVL--LNSDLIH----DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           E M + +  Y P+S    +  D +      Y+ T   K     +P  + HAVL VGYG  
Sbjct: 236 EAMVEAVALYNPVSFAYEVTEDFMSYKRGIYSSTSCHK-----TPDKVNHAVLAVGYGVD 290

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
             +PYW+V+NSWG    + G+F IERG N CG+   A Y    V
Sbjct: 291 HGVPYWIVKNSWGTQWGNNGYFLIERGKNMCGLAACASYPIPQV 334


>gi|332326583|gb|AEE42615.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 141/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVADHRLXXLSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+        + +E  YPY ++ G+  +C      V       ++    S
Sbjct: 188 CNGGLMTQAFEWLLRNMNGTMLTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKSGPISIAVDASSFMSYESGVL----TSCAGDALNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|443685370|gb|ELT89004.1| hypothetical protein CAPTEDRAFT_95613, partial [Capitella teleta]
          Length = 295

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 149/325 (45%), Gaps = 44/325 (13%)

Query: 74  KRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI-LCKTGFKWSERTYERI 132
           +R   + N+ +  +   Y  + G K     G ++FSD   +E      GF+ + RT    
Sbjct: 6   QRKEVFRNNIKKIQMHNYLHEQG-KSPFTMGINQFSDMDEKEFSTIMNGFRMNNRT---- 60

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
              R+ +    +       VP   DWRKK    P  +Q  CGSCWAFS  G         
Sbjct: 61  -KVRDHLHSHYISPAIPVSVPAEVDWRKKGYVTPVKNQGQCGSCWAFSAIGA-------- 111

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH 250
                          LEGQ+  KTGKLV  S+  LV+C+K    +GC+G   + + +Y  
Sbjct: 112 ---------------LEGQHFRKTGKLVSLSEQNLVDCSKSYGNNGCNGGVMDYAFKYIK 156

Query: 251 -QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSV 308
              G ++E  YPY+  +G    C + +  V     G   L +     MK+ +   GP+SV
Sbjct: 157 DNDGDDTEACYPYEAVDG---MCRFKRECVGATCRGYTDLPWGNEVKMKEAVALVGPVSV 213

Query: 309 LLN---SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPD 365
            ++   S  +    G  + K    CSPY L H VL+VGYG +  + YWLV+NSWG    D
Sbjct: 214 AIDASHSSFMSYKGGVYVEKE---CSPYQLDHGVLVVGYGTEQGLDYWLVKNSWGTTWGD 270

Query: 366 EGFFKIERG-NNACGIEQIAGYATI 389
           +G+ K+ R  +N CGI  +A Y  +
Sbjct: 271 QGYIKMARNMHNHCGIASMACYPLV 295


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 120/247 (48%), Gaps = 41/247 (16%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DW++K    P  +Q  CGSCW+FS  G                        LEGQ
Sbjct: 109 VPDTVDWKEKGAVTPIKNQGQCGSCWSFSSTGS-----------------------LEGQ 145

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           + I TG LV  S+ QL++C+ +    GC+G   + S  Y    AG E+E +YPY   NG 
Sbjct: 146 HFINTGTLVSLSEQQLMDCSTKYGNHGCNGGLMDNSFRYLKSVAGDETEDNYPYTAENG- 204

Query: 269 KFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHD----YNGTP 322
              C YD S + + T K ++    G E ++K  +   GP+SV +  D  H     YN   
Sbjct: 205 --VCRYDSS-LAVVTDKSYVDIPQGDEDSLKDAVANVGPISVAI--DASHSSFQLYNSGV 259

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 381
              +  TCS   L H VL +GYG +D   YWLV+NSWG     EG+ K+ R  NN CGI 
Sbjct: 260 YYAS--TCSSTQLDHGVLAIGYGTEDGKDYWLVKNSWGTSWGMEGYIKMSRNRNNNCGIA 317

Query: 382 QIAGYAT 388
             A Y T
Sbjct: 318 TQASYPT 324


>gi|358339356|dbj|GAA47436.1| cathepsin L [Clonorchis sinensis]
          Length = 236

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 116/241 (48%), Gaps = 29/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P ++DWR+  V     DQ  CGSCWAF++ G                        +EGQ
Sbjct: 21  LPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGN-----------------------IEGQ 57

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKF 270
           +  KT KLV  S+ QL++C K+   C+G F E + E      GL SEKDYPY+     K 
Sbjct: 58  WYKKTKKLVSLSEQQLLDCDKKDEACNGGFPEWAYESIVKMGGLMSEKDYPYE---AHKE 114

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            C    + +  +           + +   L + GP+SV +N++ +  Y G         C
Sbjct: 115 TCNLKPNNISAYINDSVTLSKDEKELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLC 174

Query: 331 SPYDLGHAVLLVGYGKQD--NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           S   L HAVLLVGYG       PYW+V+NSWG    ++G+F+I RG+  CGI   A  + 
Sbjct: 175 SEQGLDHAVLLVGYGVTSFWQRPYWIVKNSWGRSWGEKGYFRIYRGDGTCGINADATSSI 234

Query: 389 I 389
           +
Sbjct: 235 V 235


>gi|157864845|ref|XP_001681131.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124425|emb|CAJ02281.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMTAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|398010921|ref|XP_003858657.1| cathepsin L-like protease, partial [Leishmania donovani]
 gi|322496866|emb|CBZ31937.1| cathepsin L-like protease, partial [Leishmania donovani]
          Length = 345

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A     LV  S+ QLV C  + +G
Sbjct: 151 WAFSAVGN-----------------------IESQWARAGHGLVSLSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY--THQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++    +
Sbjct: 188 CNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PY
Sbjct: 248 ETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVAMGRNAC 329


>gi|8547325|gb|AAF76330.1|AF271385_1 cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 115/239 (48%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGA-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C++     GC+G   E + EY  + GLE+E  YPY+   G+ 
Sbjct: 145 YMKNQRTSISFSEQQLVDCSRDFGNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      ++ ++   GP +V L+  SD +   +G      
Sbjct: 204 --CRYNEQLGVAKVTGYYTVHSGDEVELQNLVGAEGPAAVALDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIASLA 317


>gi|300175452|emb|CBK20763.2| unnamed protein product [Blastocystis hominis]
          Length = 313

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 156/355 (43%), Gaps = 66/355 (18%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-------FEYFKQDGHKKHE- 101
            +A+  SL ++N     TF +F  + G+ Y N  E   R        E+ ++   + H  
Sbjct: 10  AIALATSLRYEN-----TFNSFEARYGKNYINAAERAFRQKVFAYNMEWAQKINSEDHPY 64

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
             G + F+D      +  T F  S+     +     K    +ME     P  +A DWR+K
Sbjct: 65  TVGATPFAD------MTNTEFAVSKLCGCMLKPKMTKPATPIME-----PAAEAVDWREK 113

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +QA+CGSCWAFS  G                        +EG+  +  G+L+ 
Sbjct: 114 GAVTPVKNQASCGSCWAFSATGA-----------------------MEGRNFVANGELIS 150

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            S+ QLV+C  Q SGC G     + EY  + G+  E+DYPY   + +   C  DK    +
Sbjct: 151 LSEQQLVDCDHQSSGCGGGLMTYAFEYAKKKGMCKEEDYPYHAVDED---CKDDKCTPVV 207

Query: 282 FTG--KDFLHFNGSETMKKILYKYGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGH 337
           F    ++   F+G+   + +    GP+SV + +D I    Y G  I   D +     L H
Sbjct: 208 FPKGYEEVPRFDGAALKQAV--SQGPVSVAVEADSIVFQMYTGGVI---DSSACGTSLNH 262

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI---ERGNNACGIEQIAGYATI 389
            VL VGYG      YW+V+NSWG    D+G+ KI   E G   CGI Q+  Y T 
Sbjct: 263 GVLAVGYGAD----YWIVKNSWGESWGDKGYLKIKYTESGAGICGINQMNSYPTF 313


>gi|218199600|gb|EEC82027.1| hypothetical protein OsI_25996 [Oryza sativa Indica Group]
          Length = 709

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 152/358 (42%), Gaps = 78/358 (21%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILCK 119
           F AF+ + GR+Y+  EE   R   F                 R+G + FSD + EE   +
Sbjct: 48  FAAFVRRHGREYSGPEEYARRLRVFAANLARAAAHQALDPTARHGVTPFSDLTREEFEAR 107

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                ++   + +   R  +       E++   +P ++DWR +        Q ACGSCWA
Sbjct: 108 LTGLATDVGDDDVRRRRLPMPSAAPATEEEVSGLPSSFDWRDRGAVTGVKMQGACGSCWA 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---- 234
           FS  G                        +EG   + TG L++ S+ QLV+C   C    
Sbjct: 168 FSTTGA-----------------------VEGANFLATGNLLDLSEQQLVDCDHTCDAEK 204

Query: 235 -----SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL----FT- 283
                SGC G     +  Y     GL  +  YPY  A G    C +D ++V +    FT 
Sbjct: 205 KTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQG---ACRFDANRVAVRVANFTV 261

Query: 284 --------GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSP 332
                   G D     G   M+  L ++GPL+V LN+  +  Y G    P+      C  
Sbjct: 262 VAPAAGPGGND-----GDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPL-----VCPR 311

Query: 333 YDLGHAVLLVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
             + H VLLVGYG++        + PYW+++NSWG    ++G++++ RG N CG++ +
Sbjct: 312 AWVNHGVLLVGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTM 369


>gi|66803148|ref|XP_635417.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
 gi|166201987|sp|P04988.2|CYSP1_DICDI RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|60463731|gb|EAL61909.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 149/352 (42%), Gaps = 67/352 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 115
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                   +     E I  D   V   L + E    +P A+DWR +    P  +Q  CGS
Sbjct: 88  FK-----NYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCGS 141

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC- 234
           CW+FS  G                        +EGQ+ I   KLV  S+  LV+C  +C 
Sbjct: 142 CWSFSTTGN-----------------------VEGQHFISQNKLVSLSEQNLVDCDHECM 178

Query: 235 ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEK--FKCAYDKSKVKLF 282
                     GC+G     +  Y     G+++E  YPY    G +  F  A   +K+  F
Sbjct: 179 EYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNF 238

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           T    +       M   +   GPL++  ++     Y G      D  C+P  L H +L+V
Sbjct: 239 T----MIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIV 291

Query: 343 GYGKQD-----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           GY  ++     N+PYW+V+NSWG    ++G+  + RG N CG+      + I
Sbjct: 292 GYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343


>gi|343477446|emb|CCD11725.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 149/341 (43%), Gaps = 49/341 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAF++ G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 DSSWAFTVIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC   F + + ++    +   + +E+ YPY +  G    C  +KS KV      D +H
Sbjct: 185 DLGCRAGFMDTAFKWIVSPNDGNVFTEQSYPYASGGGNVPAC--NKSGKVVGANIDDHVH 242

Query: 290 -FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +    + + L K GP+++ +++     Y G  +     +C   ++  A LLVGY    
Sbjct: 243 ILDNENAIAEWLAKNGPVAIAVDATSFQRYTGGVL----TSCISKEVNSAALLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
             PYW+++NSWG    +EG+ +IE+G N C ++     A +
Sbjct: 299 KPPYWIIKNSWGKGWGEEGYIRIEKGTNQCRMKDYVSSAVV 339


>gi|379991182|emb|CCA61803.1| cathepsin protein CatL1-MM3p, partial [Fasciola hepatica]
          Length = 326

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 114/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      +K ++   GP +V ++  SD +  Y+G   +  
Sbjct: 204 --CRYNKQLGVAKVTGYYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMM-YSGGIYQS- 259

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 260 -QTCSPLGLNHAVLAVGYGTQGGTDYWIVKNSWGSYWGERGYIRMARNRGNMCGIASLA 317


>gi|327289219|ref|XP_003229322.1| PREDICTED: cathepsin K-like, partial [Anolis carolinensis]
          Length = 289

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R+     L   + +  VPDA D+RKK   
Sbjct: 36  NHLGDMTSEELVQKMTGLK--------VPLSRKPSNDTLYIPDWEERVPDAVDYRKKGYV 87

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LE Q  +KTGKL+  S 
Sbjct: 88  TPVKNQGQCGSCWAFSSVG-----------------------ALEAQLKMKTGKLLNLSP 124

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C     GC G +   + EY H   G++S+  YPY    G+   C Y+ + K    
Sbjct: 125 QNLVDCVSNNDGCGGGYMTNAFEYVHVNRGIDSDDTYPYI---GQDENCMYNPTGKAAKC 181

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C+  ++ HAVL V
Sbjct: 182 RGYKEIPEGDEKALKRAVARKGPVSVGIDASLASFQFYSRGVYYDENCNADNINHAVLAV 241

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+V+NSWG    D+G+  + R  NNACGI  +A +  +
Sbjct: 242 GYGSQKGTKHWIVKNSWGEDWGDKGYILMARNMNNACGIANLASFPKM 289


>gi|1617037|emb|CAA26255.1| cysteine proteinase I precursor [Dictyostelium discoideum]
          Length = 343

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 149/352 (42%), Gaps = 67/352 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD------------GHKKHERYGTSEFSDRSPEE 115
           F  F  K  ++Y++ EE  ERFE FK +             HK   ++G ++F+D S +E
Sbjct: 29  FLEFQDKFNKKYSH-EEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDE 87

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                   +     E I  D   V   L + E    +P A+DWR +    P  +Q  CGS
Sbjct: 88  FK-----NYYLNNKEAIFTDDLPVADYLDD-EFINSIPTAFDWRTRGAVTPVKNQGQCGS 141

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC- 234
           CW+FS  G                        +EGQ+ I   KLV  S+  LV+C  +C 
Sbjct: 142 CWSFSTTGN-----------------------VEGQHFISQNKLVSLSEQNLVDCDHECM 178

Query: 235 ---------SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEK--FKCAYDKSKVKLF 282
                     GC+G     +  Y     G+++E  YPY    G +  F  A   +K+  F
Sbjct: 179 EYEGEEACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNF 238

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           T    +       M   +   GPL++  ++     Y G      D  C+P  L H +L+V
Sbjct: 239 T----MIPKNETVMAGYIVSTGPLAIAADAVEWQFYIGGVF---DIPCNPNSLDHGILIV 291

Query: 343 GYGKQD-----NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           GY  ++     N+PYW+V+NSWG    ++G+  + RG N CG+      + I
Sbjct: 292 GYSAKNTIFRKNMPYWIVKNSWGADWGEQGYIYLRRGKNTCGVSNFVSTSII 343


>gi|395545396|ref|XP_003774588.1| PREDICTED: cathepsin W [Sarcophilus harrisii]
          Length = 358

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 160/350 (45%), Gaps = 51/350 (14%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTS 106
           SL     ++ E FKAF ++  + Y +  E + R + F  +          H+   ++G +
Sbjct: 32  SLLPVTRDLRERFKAFQIQYNKSYPDAAEQECRLKIFADNLARAQQLTEEHQGLAQFGVT 91

Query: 107 EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            FSD + EE   +  ++ S+  Y  +    E      ++  K      + DWRK  V  P
Sbjct: 92  RFSDLTEEEF--RRLYQPSQPNYLGLRVKTEGGGYPRLQRLKT----RSCDWRKARVLTP 145

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  C SCWA S  G                        +E  +AI   +L + S  +
Sbjct: 146 VRDQKNCNSCWAISAVGN-----------------------VEALWAINYQQLFKLSVQE 182

Query: 227 LVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 285
           L++C +   GC+G F ++  +   +Q+GL  E+DYPY+    +   C   K +  +    
Sbjct: 183 LLDCRRCGQGCEGGFVWDAYMTILNQSGLAEEQDYPYRPQLSKG--CQKKKKRAWI---H 237

Query: 286 DFLHFNGSET------MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
           DFL  +  E       M + L + GP++V +NS L+  Y    I+  +  C P  + H V
Sbjct: 238 DFLMLHKEENSPSPPDMAQYLAEKGPITVTINSRLLKSYIRGVIKPGN-NCDPKYVDHVV 296

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            LVG+G+  N  YW+++NSWG    ++G+F++ RG NACGI +    A +
Sbjct: 297 QLVGFGQIHNFTYWILKNSWGSSWGEKGYFRLHRGRNACGITKFPLTAVL 346


>gi|125547724|gb|EAY93546.1| hypothetical protein OsI_15336 [Oryza sativa Indica Group]
          Length = 348

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 147/311 (47%), Gaps = 64/311 (20%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           +G ++FSD +P E   +        + E +V        +L     DG +PD +DWR+  
Sbjct: 68  HGVTKFSDLTPGEFRDRL-LGLRRPSLEGLVGGEPHEAPIL---PTDG-LPDDFDWREHG 122

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ +CGSCW+FS +                       G LEG + + TGKL   
Sbjct: 123 AVGPVKDQGSCGSCWSFSTS-----------------------GALEGAHFLATGKLEVL 159

Query: 223 SKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKC 272
           S+ Q+V+C  +C         SGC+G     +  Y  ++ GL+SEKDYPY    G +  C
Sbjct: 160 SEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTC 216

Query: 273 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
            +DKSK+ +   K+F   + +E  +   L K+GPL++ +N+  +  Y G           
Sbjct: 217 KFDKSKI-VAQVKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSC 268

Query: 332 PY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNA 377
           P+     L H VLLVGYG            PYW+++NSWG    ++G++KI RG    N 
Sbjct: 269 PFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNK 328

Query: 378 CGIEQIAGYAT 388
           CG++ +    T
Sbjct: 329 CGVDSMVSSVT 339


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 120/260 (46%), Gaps = 33/260 (12%)

Query: 136 REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNH 195
           R       +     G +PD+ DWR   +  P  DQ  CGSCW+FS  G            
Sbjct: 102 RSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCGSCWSFSTTGS----------- 150

Query: 196 IDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYT-HQA 252
                       +EGQ+A KTG+LV  S+  LV+C+K     GC+G   + + +Y     
Sbjct: 151 ------------VEGQHARKTGQLVSLSEQNLVDCSKAQGNQGCNGGLMDDAFQYIITNK 198

Query: 253 GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLL 310
           G+++E  YPY   +G  KF  A   + +  F  +D     GSE+ ++  +   GP+SV +
Sbjct: 199 GIDTEASYPYTAKDGTCKFNAANVGATLSSF--QDITR--GSESDLQNAVATVGPVSVAI 254

Query: 311 NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFK 370
           ++        T    N++ CS   L H VL  GYG  +  PYWLV+NSWG      G+  
Sbjct: 255 DASKNSFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTSNGTPYWLVKNSWGSSWGQAGYIW 314

Query: 371 IER-GNNACGIEQIAGYATI 389
           + R  NN CGI   A Y  +
Sbjct: 315 MSRNANNQCGIATSASYPIV 334


>gi|354472953|ref|XP_003498701.1| PREDICTED: cathepsin K [Cricetulus griseus]
          Length = 329

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 132/288 (45%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +          L   E +G  PDA D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------LPPSHSHSNDTLYIPEWEGRAPDAIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS AG                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGECGSCWAFSSAGA-----------------------LEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYD-KSKVKLF 282
             LV+C  +  GC G +   +  Y     G++SE  YPY    G+   C Y+  +K    
Sbjct: 165 QNLVDCVSENYGCGGGYMTTAFRYVQTNGGIDSEDAYPYV---GQDQSCMYNPTAKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C   ++ HAVL+V
Sbjct: 222 RGYREIPVGSEKALKRAVARVGPISVSIDASLTSFQFYSRGVYYDENCDGDNVNHAVLVV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGAQKGNKHWIIKNSWGESWGNKGYVLLARNRNNACGITNLASFPKM 329


>gi|222628593|gb|EEE60725.1| hypothetical protein OsJ_14236 [Oryza sativa Japonica Group]
          Length = 364

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 148/311 (47%), Gaps = 64/311 (20%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
           +G ++FSD +P E   +  F    R     +   E  E  ++    DG +PD +DWR+  
Sbjct: 84  HGVTKFSDLTPGEF--RDRFLGLRRPSLEGLVGGEPHEAPILPT--DG-LPDDFDWREHG 138

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
             GP  DQ +CGSCW+FS +                       G LEG + + TGKL   
Sbjct: 139 AVGPVKDQGSCGSCWSFSTS-----------------------GALEGAHFLATGKLEVL 175

Query: 223 SKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKC 272
           S+ Q+V+C  +C         SGC+G     +  Y  ++ GL+SEKDYPY    G +  C
Sbjct: 176 SEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYA---GRENTC 232

Query: 273 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
            +DKSK+ +   K+F   + +E  +   L K+GPL++ +N+  +  Y G           
Sbjct: 233 KFDKSKI-VAQVKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGG-------VSC 284

Query: 332 PY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERG---NNA 377
           P+     L H VLLVGYG            PYW+++NSWG    ++G++KI RG    N 
Sbjct: 285 PFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNK 344

Query: 378 CGIEQIAGYAT 388
           CG++ +    T
Sbjct: 345 CGVDSMVSSVT 355


>gi|225448924|ref|XP_002266821.1| PREDICTED: cysteine proteinase 15A-like [Vitis vinifera]
          Length = 375

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 164/361 (45%), Gaps = 79/361 (21%)

Query: 59  FDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 107
           F  + +L T   F+ F+ K G++Y++ EE   R   F ++  +  E         +G + 
Sbjct: 49  FGVDGVLGTEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPTALHGVTP 108

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           FSD S EE          ER +  +V     +  V +    +E DG +P+++DWR+K   
Sbjct: 109 FSDLSEEEF---------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAV 158

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
                Q  CGSCWAFS  G                        +EG + I T KL+  S+
Sbjct: 159 TEVKMQGTCGSCWAFSTTGA-----------------------VEGAHFISTKKLLTLSE 195

Query: 225 SQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCA 273
            QLV+C   C         SGC+G     + +Y  +A GLE E  YPY   +GE KFK  
Sbjct: 196 QQLVDCDHMCDIRDKTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFK-- 253

Query: 274 YDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDET 329
            D+  V++    +F     +E  +   L  +GPL+V LN+  +  Y G    P+      
Sbjct: 254 PDRVAVRVV---NFTEVPINENQIAANLVCHGPLAVGLNAIFMQTYIGGVSCPL-----I 305

Query: 330 CSPYDLGHAVLLVGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
           C    + H VLLVGYG +          PYW+++NSWG    + G++++ RG+  CG+  
Sbjct: 306 CPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNT 365

Query: 383 I 383
           +
Sbjct: 366 M 366


>gi|53748485|emb|CAH59428.1| cysteine protease 2 [Plantago major]
          Length = 245

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/276 (31%), Positives = 127/276 (46%), Gaps = 59/276 (21%)

Query: 134 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYL 193
           AD  K  K+         +P+ +DWR+K       +Q +CGSCW+FS  G          
Sbjct: 1   ADENKAPKLPTS-----NLPEEFDWREKGAVTAVKNQGSCGSCWSFSTTG---------- 45

Query: 194 NHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----------SGCDGCFFE 243
                         LEG   + TG+L+  S+ QLV+C  +C          +GC+G    
Sbjct: 46  -------------ALEGANYLATGELISLSEQQLVDCDHECDPEEGADSCDAGCNGGLMN 92

Query: 244 PSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 302
            + EY  +AG L+ EKDYPY   +G    C +DK+K+        +     + +   L K
Sbjct: 93  NAFEYALKAGGLQKEKDYPYTGKDG---TCKFDKTKIAASVHNFSVVSIDEDQIAANLVK 149

Query: 303 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVLLVGYG------KQDNIPY 352
           YGPL+V +N+  +  Y G           PY     L H VL+VGYG      +  N PY
Sbjct: 150 YGPLAVGINAAWMQTYIGG-------VSCPYICGKSLDHGVLIVGYGTGYAPVRLKNKPY 202

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           W+++NSWG    + G++KI RG N CG+E +    T
Sbjct: 203 WIIKNSWGESWGESGYYKICRGRNVCGVESMVSSVT 238


>gi|402856109|ref|XP_003892642.1| PREDICTED: cathepsin K [Papio anubis]
          Length = 348

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 95  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 146

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 147 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 183

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 184 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 240

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 241 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 300

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 301 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 348


>gi|343472970|emb|CCD15012.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 382

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 147/330 (44%), Gaps = 49/330 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVS-TGKAPPAIDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 DSSWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDFLH 289
             GC G F +P+ ++   +++  + +E+ YPY +  G    C  DKS KV     +D + 
Sbjct: 185 DFGCGGGFSDPAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDRVD 242

Query: 290 FNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               E  + + L K GP+++ +++     Y G  +     +C   ++  AVLLVGY    
Sbjct: 243 LPRDENAIAEWLAKNGPVAIAVDATSFQSYTGGVL----TSCISKEMNSAVLLVGYDDTS 298

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
             PYW+++NSW     ++G+ +IE+G N C
Sbjct: 299 KPPYWIIKNSWSKGWGEKGYIRIEKGTNQC 328


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 155/348 (44%), Gaps = 51/348 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE------------RYGTSEFS 109
           ++I+  +K F ++  R Y    E   RF  F  +  K  E            + G +EF+
Sbjct: 54  DDIIAAWKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVNEFT 113

Query: 110 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
           D++  E+    G+K +        A R K    +    +   +P   DWR++       +
Sbjct: 114 DKTDYELKKLRGYKVTSG------AIRHKGSTFIRS--EHTKLPSKVDWRREGAVTDVKN 165

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAFS  G                        +EGQ+  KT +LV  S+ QLV+
Sbjct: 166 QGQCGSCWAFSTTGA-----------------------IEGQHYRKTNRLVNLSEQQLVD 202

Query: 230 CAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-EKFKCAYDKSKV-KLFTG 284
           C+K    +GC G     + EY     G++SE  YPY + +G E  +C ++ S +    TG
Sbjct: 203 CSKSYGNNGCSGGLMNSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTG 262

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHAVLLV 342
              +H      +   +   GP+SV +N+ L     Y        D   +   L H VL+V
Sbjct: 263 YVNIHEGDERALMDAVATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVV 322

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG+++   YWL++NSWG    ++G+ KI +G +N CG+   A Y  +
Sbjct: 323 GYGEENGRSYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAASYPLV 370


>gi|378943060|gb|AFC76271.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|74136185|ref|NP_001027984.1| cathepsin K precursor [Macaca mulatta]
 gi|47117667|sp|P61276.1|CATK_MACFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|47117668|sp|P61277.1|CATK_MACMU RecName: Full=Cathepsin K; Flags: Precursor
 gi|3236470|gb|AAC23694.1| cathepsin K [Macaca fascicularis]
 gi|4927694|gb|AAD33249.1| cathepsin K [Macaca mulatta]
 gi|355558400|gb|EHH15180.1| hypothetical protein EGK_01237 [Macaca mulatta]
 gi|355763132|gb|EHH62118.1| hypothetical protein EGM_20317 [Macaca fascicularis]
 gi|380809978|gb|AFE76864.1| cathepsin K preproprotein [Macaca mulatta]
 gi|383416065|gb|AFH31246.1| cathepsin K preproprotein [Macaca mulatta]
 gi|384945478|gb|AFI36344.1| cathepsin K preproprotein [Macaca mulatta]
          Length = 329

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 137/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        + A   +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTNEEVVQKMTGLK--------VPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|461905|sp|Q05094.1|CYSP2_LEIPI RecName: Full=Cysteine proteinase 2; AltName: Full=Amastigote
           cysteine proteinase A-2; Flags: Precursor
 gi|159298|gb|AAA29229.1| cysteine proteinase [Leishmania pifanoi]
          Length = 444

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 136/324 (41%), Gaps = 44/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+    ++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEK 250

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 251 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQLNHGVLLVGYDMTGEVPYWV 306

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 307 IKNSWGGDWGEQGYVRVVMGVNAC 330


>gi|167427527|gb|ABZ80400.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKN 162
           G S+F+D + EE          + TY R +     +    +  E  D  VP++ DWR+  
Sbjct: 45  GLSQFTDMTFEEF---------KATYLREIPRASDMLSHGIPYEANDRAVPESIDWREFG 95

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
                 DQ  CGSCWAFS  G                        +EGQY       + F
Sbjct: 96  YVTEVKDQGDCGSCWAFSTTGA-----------------------VEGQYTKNQKANISF 132

Query: 223 SKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
           S+ QLV+C+      GC+G F E + EY  + GLE+E  YPYK    E+  C YD     
Sbjct: 133 SEQQLVDCSGDYGNHGCNGGFMENAYEYLERRGLETESSYPYK---AEEGPCKYDSRLGV 189

Query: 281 LFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGH 337
           +     F+  +G E+ +  ++   GP +V ++  SD +    G    +N   CS   L H
Sbjct: 190 VEVFGYFIEHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIYASRN---CSSESLNH 246

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATID 390
            +L+VGYG QD   YW+V+NSWG +  D G+ ++ R  +N CGI   A    ++
Sbjct: 247 GILVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIASAASVPVVE 300


>gi|119573900|gb|EAW53515.1| cathepsin K (pycnodysostosis), isoform CRA_a [Homo sapiens]
          Length = 288

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 139/287 (48%), Gaps = 38/287 (13%)

Query: 107 EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           ++++++ EE++ K TG K        +     +    L   E +G  PD+ D+RKK    
Sbjct: 36  QYNNKTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVT 87

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S  
Sbjct: 88  PVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSPQ 124

Query: 226 QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 283
            LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K     
Sbjct: 125 NLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKCR 181

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL VG
Sbjct: 182 GYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVG 241

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 242 YGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 288


>gi|394331816|gb|AFN27127.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G   +C+     V       +L    S
Sbjct: 188 CAGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYLTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|408009|gb|AAA18215.1| cysteine protease precursor [Trypanosoma congolense]
          Length = 444

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 150/343 (43%), Gaps = 52/343 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V   G  P+A DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVST-GKAPEAVDWRKKGAVTPVKDQGQC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 GSCWAFSAIGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G   + + ++   +++  + +E+ YPY +  G    C  DKS  K+   K   H 
Sbjct: 185 DFGCEGGLMDDAFKWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSG-KVVGAKIRDHV 241

Query: 291 NGSETMKKI---LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +  E    I   L K GP+++ +++     Y G  +     +C    L H VLLVGY   
Sbjct: 242 DLPEDENAIAEWLAKNGPVAIAVDATSFQSYTGGVL----TSCISEHLDHGVLLVGYDDT 297

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              PYW+++NSW     +EG+  + R +N C ++ +   A + 
Sbjct: 298 SKPPYWIIKNSWSKGWGEEGYSALRR-HNQCLMKNLPSSAVVS 339


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 120/246 (48%), Gaps = 31/246 (12%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNA 265
           EG++ +K G+LV  S+  LV+C++    +GC+G   E + +Y  +  G+++EK YPY+  
Sbjct: 150 EGRHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKENDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
           +GE   C + K  V    TG   +     + +KK +   GP+SV +++        +   
Sbjct: 210 DGE---CRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDASHSSFQLYSEGV 266

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQI 383
            ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI   
Sbjct: 267 YDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIASQ 326

Query: 384 AGYATI 389
           A Y  +
Sbjct: 327 ASYPLV 332


>gi|334347644|ref|XP_001379528.2| PREDICTED: cathepsin W-like [Monodelphis domestica]
          Length = 619

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 157/336 (46%), Gaps = 47/336 (13%)

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSE 107
           L    +++++ FKAF ++  + YA+  E + RFE F  +          H    ++G ++
Sbjct: 255 LPPATQDLMDQFKAFQIQYNKSYADPAEQERRFEIFADNLAWAQQLTEKHGGMAQFGVTQ 314

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           FSD + EE      ++ ++ +Y+       K  ++        P+  + DWRK  V  P 
Sbjct: 315 FSDLTEEEF--HQHYQPAQSSYKEPSLKTRKHPRLQR------PLIRSCDWRKAGVLTPV 366

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
             Q  C SCWA +  G                        +E  +AI   +  E S  ++
Sbjct: 367 RKQKKCRSCWAIAAVGN-----------------------VEALWAIHYEQHFELSVQEV 403

Query: 228 VECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 286
           ++C +    C G F ++  +    Q GL  E+DYPY++    K  C   +++      +D
Sbjct: 404 LDCDRCGKACKGGFVWDAFLTILRQRGLARERDYPYQDQLSRK-GCQKKQNRTGWI--QD 460

Query: 287 FLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           FL     E  M + L   GP++V +N  L+  Y    IR  D+ C P  + H+VLLVG+G
Sbjct: 461 FLMLPKEENAMAEHLALKGPITVTINQALLKTYRKGVIRPKDD-CDPNQVDHSVLLVGFG 519

Query: 346 KQ-DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           +   +  YW+++NSWG    +EG+F++ RG NACGI
Sbjct: 520 QNTKDGAYWILKNSWGSDWGEEGYFRLRRGTNACGI 555


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 166/348 (47%), Gaps = 55/348 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 111
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 112 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        LEGQ+  K+GKLV  S+  LV+C
Sbjct: 139 GQCGSCWSFSATGS-----------------------LEGQHFRKSGKLVSLSEQNLVDC 175

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +++   +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + +
Sbjct: 176 SEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGY 231

Query: 288 LHF-NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           +   +G+E  ++  +   GP+SV +++       Y+G    + +  CSP  L H VL+VG
Sbjct: 232 VDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPE--CSPSQLDHGVLVVG 289

Query: 344 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG +D+   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 290 YGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|28974202|gb|AAO61485.1| cathepsin H [Sterkiella histriomuscorum]
          Length = 366

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 131/300 (43%), Gaps = 46/300 (15%)

Query: 95  DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVP 153
           DG   +++ G + FSD + EE             Y  I A++             +  +P
Sbjct: 88  DGTNTYKK-GLNAFSDMTDEEFF----------DYYNIKAEQNCSATNRKSFGNSNANIP 136

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             WDWR   V  P  +Q  CGSCW FS  G                        +E  Y 
Sbjct: 137 TEWDWRTFGVVSPVKNQGKCGSCWTFSTVG-----------------------CVESHYL 173

Query: 214 IKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKF 270
           +K G     S+ QLV+CA      GC G     + EY     GL  E  YPYK ANG+  
Sbjct: 174 LKYGAFRNLSEQQLVDCAGDYDNHGCSGGLPSHAFEYIKDNGGLALETTYPYKAANGQ-- 231

Query: 271 KCAYDKSK--VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKND 327
            C+  K +  V +  G   +  N  + +K+ +Y +GP+SV     D   DY         
Sbjct: 232 -CSIQKGQQSVGIRGGAVNISLN-EDDLKQAIYLHGPVSVAFRVIDGFRDYKSGVYAVEG 289

Query: 328 ETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
               P D+ HAVL VG+G  +N + YW+++NSWG    D+GFFK++RG N CGI+    Y
Sbjct: 290 CANGPNDVNHAVLAVGFGTDENKVDYWIIKNSWGAAWGDQGFFKMKRGVNMCGIQNCNSY 349


>gi|6435586|pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435587|pdb|7PCK|B Chain B, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435588|pdb|7PCK|C Chain C, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435589|pdb|7PCK|D Chain D, Crystal Structure Of Wild Type Human Procathepsin K
 gi|6435592|pdb|1BY8|A Chain A, The Crystal Structure Of Human Procathepsin K
          Length = 314

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 61  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 112

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 113 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 149

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 150 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 206

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 207 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 266

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 267 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 314


>gi|157868354|ref|XP_001682730.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
 gi|68126185|emb|CAJ07238.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
          Length = 354

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 152/363 (41%), Gaps = 54/363 (14%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +  L  DN      +  F  + G+ +  D +   RF  FKQ+        
Sbjct: 18  VVCYGSALVAQTPLGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLN 77

Query: 96  GHKKHERYGTS-EFSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
            H  H  Y  S +F+D +P+E     L    +    + Y+  V   + V    M V    
Sbjct: 78  THNPHAHYDVSGKFADLTPQEFAKLYLNPDYYAHRGKDYKEHVHVDDSVLSGAMSV---- 133

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
                 DWR+K    P  +Q  CGSCWAFS  G                        +E 
Sbjct: 134 ------DWREKGAVTPVKNQGMCGSCWAFSAIGN-----------------------IES 164

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANG 267
           Q+A+K   LV  S+  LV C     GC+G   + ++E+    H   + +EK YPY +A G
Sbjct: 165 QWALKNHSLVSLSEQMLVSCDDIDDGCNGGLMDQAMEWIIQHHNGTVPTEKSYPYASAGG 224

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
               C +DK +            +  + +   + K GP++V +++     Y G  +    
Sbjct: 225 TSPPC-HDKGEFGARISGYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVV---- 279

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
             C    L H VL+VG+ K+   PYW+V+NSWG    ++G+ ++  G+N C ++     A
Sbjct: 280 TLCFGLSLNHGVLVVGFNKRAKPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTA 339

Query: 388 TID 390
           T+D
Sbjct: 340 TVD 342


>gi|60654335|gb|AAX29858.1| cathepsin K [synthetic construct]
 gi|60654337|gb|AAX29859.1| cathepsin K [synthetic construct]
          Length = 330

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 169/378 (44%), Gaps = 57/378 (15%)

Query: 34  PSLT-DRITDQVVARVDTLAIEGSLTFDN-ENILETFKAFIVKRGRQYANDEEIKERFEY 91
           PSL+  R+ +Q V       + GS+  +  ++I+  +K F ++  R Y    E   RF  
Sbjct: 28  PSLSLGRLFEQQVKE----GVPGSVNVELLDDIIAAWKFFKIQFKRAYNGIHEETRRFFI 83

Query: 92  FKQDGHKKHE------------RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
           F  +  K  E            + G +EF+D++  E+    G+K +        A R K 
Sbjct: 84  FSANFVKMMEHNHAFQEGKVTYKMGVNEFTDKTDYELKKLRGYKVTSG------AIRHKG 137

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
              +    +   +P   DWR++       +Q  CGSCWAFS  G                
Sbjct: 138 STFIRS--EHTKLPSKVDWRREGAVTDVKNQGQCGSCWAFSTTG---------------- 179

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLES 256
                   +EGQ+  KT +LV  S+ QLV+C+K    +GC G     + EY     G++S
Sbjct: 180 -------AIEGQHYRKTNRLVNLSEQQLVDCSKSYGNNGCSGGLMNSAFEYVRDNEGIDS 232

Query: 257 EKDYPYKNANG-EKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL 314
           E  YPY + +G E  +C ++ S +    TG   +H      +   +   GP+SV +N+ L
Sbjct: 233 EISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDAVATKGPVSVAINAGL 292

Query: 315 --IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIE 372
                Y        D   +   L H VL+VGYG+++   YWL++NSWG    ++G+ KI 
Sbjct: 293 PSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEENGRSYWLIKNSWGEEWGEKGYIKIS 352

Query: 373 RG-NNACGIEQIAGYATI 389
           +G +N CG+   A Y  +
Sbjct: 353 KGSHNMCGVASAASYPLV 370


>gi|4503151|ref|NP_000387.1| cathepsin K preproprotein [Homo sapiens]
 gi|1168793|sp|P43235.1|CATK_HUMAN RecName: Full=Cathepsin K; AltName: Full=Cathepsin O; AltName:
           Full=Cathepsin O2; AltName: Full=Cathepsin X; Flags:
           Precursor
 gi|562757|emb|CAA57649.1| Cathepsin O [Homo sapiens]
 gi|606923|gb|AAA65233.1| cathepsin O [Homo sapiens]
 gi|1195556|gb|AAB35521.1| cathepsin O2 [Homo sapiens]
 gi|16359188|gb|AAH16058.1| Cathepsin K [Homo sapiens]
 gi|49456311|emb|CAG46476.1| CTSK [Homo sapiens]
 gi|60823594|gb|AAX36649.1| cathepsin K [synthetic construct]
 gi|119573901|gb|EAW53516.1| cathepsin K (pycnodysostosis), isoform CRA_b [Homo sapiens]
 gi|307685681|dbj|BAJ20771.1| cathepsin K [synthetic construct]
 gi|312150424|gb|ADQ31724.1| cathepsin K [synthetic construct]
          Length = 329

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +GE   C + K  V   T   ++    GSE  +KK +   GP+SV +++        +  
Sbjct: 210 DGE---CRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 QASYPLV 332


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +GE   C + K  V   T   ++    GSE  +KK +   GP+SV +++        +  
Sbjct: 210 DGE---CRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 QASYPLV 332


>gi|348565006|ref|XP_003468295.1| PREDICTED: cathepsin W-like [Cavia porcellus]
          Length = 375

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 157/355 (44%), Gaps = 61/355 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y+N  E   R + F  +       + E  GT+EF     SD + EE 
Sbjct: 40  EVFKLFQIQFNRSYSNQAEYARRLDIFVHNLATAQRLQEEELGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
               G +       R+     +V + +   +++  +  + DWRK ++  P  +Q  C  C
Sbjct: 100 GQLYGNR-------RVARKDLRVARKVSFDKQEELMSQSCDWRKAHIISPVKNQGNCRCC 152

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WA + AG                        +E  + I+    V  S  +L++CA+   G
Sbjct: 153 WAIAAAGN-----------------------IEAMWNIRYKVSVTLSVQELLDCARCEDG 189

Query: 237 CDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C G + ++  I   + +GL SEKDYP++  +    KC     +   +     +     + 
Sbjct: 190 CAGGYIWDAFITVLNYSGLASEKDYPFR-GHANIHKCLASNYRKVAWIYDYIMLPRDEQG 248

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK--------- 346
           + + +   GP++V++NS ++  Y    I+     C P+ + H VLLVGYG+         
Sbjct: 249 IARYVATQGPITVIINSKILQHYKKGIIKGTSSKCDPWFVDHYVLLVGYGRSKAEEEKWT 308

Query: 347 -----------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                      + +IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D
Sbjct: 309 ETDLSHSNRPPRHSIPYWILKNSWGANWGEEGYFRLHRGSNTCGITKYPITARVD 363


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 121/247 (48%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   E + +Y     G+++EK YPY+  
Sbjct: 150 EGQHFLKNGELVSLSEQNLVDCSQSFGNNGCEGGLMEDAFKYIKANDGIDTEKSYPYEAV 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +GE   C + K  V   T   ++    GSE  +KK +   GP+SV +++        +  
Sbjct: 210 DGE---CRFKKEDVGA-TDTGYVEIKAGSEVDLKKAVATVGPISVAIDASHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             ++  CS  DL H VL+VGYG +    YWLV+NSW     D+G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEDLDHGVLVVGYGVKGGKKYWLVKNSWAESWGDQGYILMSRDNNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 QASYPLV 332


>gi|148927396|gb|ABR19829.1| cysteine proteinase [Elaeis guineensis]
          Length = 358

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 168/369 (45%), Gaps = 61/369 (16%)

Query: 40  ITDQVVARVDTL--AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-- 95
           +   V  R+D+L  ++ G L     N L  F  F  + G++Y + EE+K RF  F ++  
Sbjct: 30  LIQSVTERIDSLETSLLGVLG-QTRNALH-FARFAHRYGKRYQSVEEMKLRFAIFMENLE 87

Query: 96  ----GHKKHERY--GTSEFSDRSPEEILCKTGFKWSER-TYERIVADREKVEKMLMEVEK 148
                +++   Y  G + ++D S EE      F+ S     +   A  +   KM  E+  
Sbjct: 88  LIRSTNRRGLPYKLGINRYADMSWEE------FRASRLGAAQNCSATLKGNHKMTDEL-- 139

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
              +P   DWR+  +  P  DQ +CGSCW FS  G                        L
Sbjct: 140 ---LPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGA-----------------------L 173

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
           E  Y   TGK +  S+ QLV+CA   +  GC+G     + EY  +  GL++E+ YPY   
Sbjct: 174 EAAYTQATGKGISLSEQQLVDCAYAFNNFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGV 233

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG---PLSVLLNSDLIHDYNGTP 322
           NG    C +    V +   +      G+E   ++L+  G   P+S+         +    
Sbjct: 234 NG---FCHFKPENVGVKVVESVNITLGAE--DELLHAVGLVRPVSIAFEVVSGFRFYKGG 288

Query: 323 IRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           +  +D TC  +  D+ HAVL VGYG ++ +PYWL++NSWG     +G+FK+E G N CGI
Sbjct: 289 VYTSD-TCGRTQMDVNHAVLAVGYGVENGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGI 347

Query: 381 EQIAGYATI 389
              A Y  +
Sbjct: 348 ATCASYPIV 356


>gi|836934|gb|AAA95998.1| cathepsin X [Homo sapiens]
          Length = 329

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   E +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPEWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|308808478|ref|XP_003081549.1| Cysteine proteinase Cathepsin F (ISS) [Ostreococcus tauri]
 gi|116060014|emb|CAL56073.1| Cysteine proteinase Cathepsin F (ISS), partial [Ostreococcus tauri]
          Length = 293

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 143/314 (45%), Gaps = 60/314 (19%)

Query: 93  KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME--VEKDG 150
           +Q   +   ++G + FSD +PEE         +ER    +    E  EK+     V +D 
Sbjct: 9   QQANDRGSAKHGVTRFSDLTPEEF--------AERYLGHVKLSSEHREKVRARGGVIEDL 60

Query: 151 P---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
           P   +P  +DWR K       DQ  CGSCW FS  G                        
Sbjct: 61  PTKHLPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTG-----------------------A 97

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESE 257
           +EG + I TGKLVE S+ QL++C   C         SGC+G     ++EY     G+++E
Sbjct: 98  IEGAHFISTGKLVELSEQQLLDCDVGCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTE 157

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIH 316
           K YPY    GEK +C  D+  +   T K+F + +  E  M   L K+GPLS+ +N+  + 
Sbjct: 158 KSYPYV---GEKGECKADEGTLGA-TLKNFSYVSSDEKQMAAALVKHGPLSIGINAAWMQ 213

Query: 317 DYNGTPIRKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFF 369
            Y G         C    L H VL+VGYG       +    PYW+V+NSW P   + G++
Sbjct: 214 TYIGG--VACPWLCDSEALDHGVLIVGYGSSGFAPVRWQQEPYWIVKNSWSPAWGEGGYY 271

Query: 370 KIERGNNACGIEQI 383
           +I +   +CGI  +
Sbjct: 272 RICKDKGSCGINNM 285


>gi|147809367|emb|CAN64491.1| hypothetical protein VITISV_015725 [Vitis vinifera]
          Length = 321

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 158/349 (45%), Gaps = 76/349 (21%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F+ F+ K G++Y++ EE   R   F ++  +  E         +G + FSD S EE    
Sbjct: 7   FRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPXALHGVTPFSDLSEEEF--- 63

Query: 120 TGFKWSERTYERIVAD---REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                 ER +  +V     +  V +    +E DG +P+++DWR+K        Q  CGSC
Sbjct: 64  ------ERMFTGVVGRPHMKGGVAETAAALEVDG-LPESFDWREKGAVTEVKMQGTCGSC 116

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC-- 234
           WAFS  G                        +EG + I T KL+  S+ QLV+C   C  
Sbjct: 117 WAFSTTGA-----------------------VEGAHFISTKKLLTLSEQQLVDCDHMCDI 153

Query: 235 -------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGK 285
                  SGC+G     + +Y  +A GLE E  YPY   +GE KFK   D+  V++    
Sbjct: 154 RDKXACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTGKHGECKFK--PDRVAVRVV--- 208

Query: 286 DFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLL 341
           +F      E  +   L  +GPL+V LN+  +  Y G    P+      C    + H VLL
Sbjct: 209 NFTEVPIBENQIAANLVCHGPLAVGLNAXFMQTYIGGVSCPL-----ICPKRWINHGVLL 263

Query: 342 VGYGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           VGYG +          PYW+++NSWG    + G++++ RG+  CG+  +
Sbjct: 264 VGYGAKGYSILRFGYKPYWIIKNSWGXRWGEHGYYRLCRGHGMCGMNTM 312


>gi|378943046|gb|AFC76264.1| cathepsin L-like protease [Leishmania major]
 gi|378943056|gb|AFC76269.1| cathepsin L-like protease [Leishmania major]
 gi|394331745|gb|AFN27095.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|6967097|emb|CAB72480.1| cysteine protease-like protein [Arabidopsis thaliana]
          Length = 377

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 53/327 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 118
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCAGTFNNFG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  GL++E+ YPY   +G    C +    + +       +     +
Sbjct: 205 CHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAED 261

Query: 295 TMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGYG +D++P
Sbjct: 262 ELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVP 319

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNAC 378
           YWL++NSWG    D G+FK+E G N C
Sbjct: 320 YWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|341876229|gb|EGT32164.1| hypothetical protein CAEBREN_11106 [Caenorhabditis brenneri]
          Length = 389

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 171/384 (44%), Gaps = 67/384 (17%)

Query: 14  AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           AI+ I+A F +  +   LCL  L       V  R++   +E    +        F  FI+
Sbjct: 46  AIIAIRAWFYVV-LFVMLCLTVLF------VHKRIENSNMEQEAKY-----FRMFNDFIL 93

Query: 74  KRGRQYANDEEIKERFEYFKQD------GHKKH--ERYGTSEFSDRSPEEILCKTGFKWS 125
           K  R+Y    E+  R+  F ++        KKH       +E++D             W+
Sbjct: 94  KYNRRYEQPGELSRRYLIFVKNVKEFEAEEKKHLGVDLDVNEYTD-------------WT 140

Query: 126 ERTYERIVADREKVEKMLMEVEKDGPV-------PDAWDWRKKNVTGPAGDQAACGSCWA 178
           +   +R+V +++ V   L  V  +G         P + DWR +    P  +Q  CGSCWA
Sbjct: 141 DDELKRMVIEKKNVITDLEAVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWA 200

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+                           +E Q+AIK G+LV  S+ ++V+C  + +GC 
Sbjct: 201 FATVAA-----------------------VEAQHAIKKGQLVSLSEQEMVDCDGRNNGCS 237

Query: 239 GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 298
           G +   ++ +  + GLESEK+YPY     +  +C   ++  ++F     +     E +  
Sbjct: 238 GGYRPYAMRFVKENGLESEKEYPYSALKHD--QCFLKQNDTRVFIDDFRMLSTNEEDIAN 295

Query: 299 ILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVR 356
            +   GP++  +N    ++ Y       + E C+   +G HA+ +VGYG + +  +W+V+
Sbjct: 296 WVGTKGPVTFGMNVVKAMYSYRSGIFNPSSEDCAEKSMGAHALTIVGYGGEGSSAFWIVK 355

Query: 357 NSWGPIGPDEGFFKIERGNNACGI 380
           NSWG      G+F++ RG N+CG+
Sbjct: 356 NSWGTSWGSSGYFRLARGVNSCGL 379


>gi|45822205|emb|CAE47499.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 317

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 158/347 (45%), Gaps = 48/347 (13%)

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERY---------G 104
           +  +  ++ + +  F V   ++Y + +E + RF+ F Q+  K    + RY         G
Sbjct: 5   VAVNATSVHQQWAQFKVNHSKKYGHLKEEQVRFQVFSQNLQKIEQHNARYQNGEVSFYLG 64

Query: 105 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
            ++F+D + EE       +   +  +R +  R   +  L        VP++ DWR+K   
Sbjct: 65  VNQFADMTSEEFKAMLDSQLIHKP-KRDITSRFVADPQLT-------VPESIDWREKGAV 116

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  DQ  CGSCWAFS AG                        LEGQ  +K GKL   S 
Sbjct: 117 NPVRDQEQCGSCWAFSAAG-----------------------ALEGQRFLKEGKLEVLST 153

Query: 225 SQLVECAK--QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLF 282
            QLV+C++  +  GC+G +   + +Y    GL  E  Y Y+  +G  + C      +K  
Sbjct: 154 QQLVDCSRDYKNEGCNGGWPHWAYDYIKDNGLCLESKYKYQGYDG--YYCKECIPAIKKI 211

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   ++    E +K+ +   GP++V +N++         I ++        + HAVL V
Sbjct: 212 NGYSSIN-QTEEALKEAVGTAGPIAVCVNANDDWQLYSGGILESQSCPGGESINHAVLAV 270

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           GYG ++   +WL++NSW     +EG+ +I RG N CGI ++A Y  +
Sbjct: 271 GYGSENGKDFWLIKNSWNTYWGEEGYLRIVRGKNQCGINEVADYPLL 317


>gi|348511930|ref|XP_003443496.1| PREDICTED: cathepsin O-like [Oreochromis niloticus]
          Length = 338

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 147/330 (44%), Gaps = 59/330 (17%)

Query: 68  FKAFIVKRGRQY-ANDEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 115
           F AF  +  R Y  + EE   R   F++               +  +YG + FSD S EE
Sbjct: 42  FGAFRKQFHRTYEVSSEEFSRRHLSFQRATIRHTYLNSFSTETQSAKYGINRFSDLSQEE 101

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                        Y   V +R  +   L   E    +PD +DWR K       DQ ACGS
Sbjct: 102 F---------RDLYLGAVYERAPLFSGLSVKE----LPDKFDWRDKAAVAAVQDQQACGS 148

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAFS+ G                        ++  +AI   +L + S  Q+V+C+ Q +
Sbjct: 149 CWAFSVVGA-----------------------IQSVHAIGGSQLEQLSVQQVVDCSYQNA 185

Query: 236 GCDGCFFEPSIEYTHQA--GLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFN 291
           GC+G     ++ +  Q    L ++ +YPYK        F  ++    +K FT  DF   +
Sbjct: 186 GCNGGSTTRALNWLKQTRVKLVTQSEYPYKAKTEICHFFSQSHGGVAIKNFTTHDF---S 242

Query: 292 GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           G E  M   L +YGPL  ++++    DY G  I+ +   CS     HA+L+VGY    +I
Sbjct: 243 GQEKAMMGQLVQYGPLVAIVDAVSWQDYLGGIIQHH---CSSQWSNHAILIVGYDTTGDI 299

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           PYW+V+NSWG    +EG+  I+ G N CGI
Sbjct: 300 PYWIVQNSWGTRWGNEGYVYIKIGGNICGI 329


>gi|33333708|gb|AAQ11972.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E   ME EKD     A DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDME-EKD-----AVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEEYGNNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DETC       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 163/349 (46%), Gaps = 50/349 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 111
           + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++D 
Sbjct: 23  VKEEWNAFKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADL 82

Query: 112 SPEEIL-CKTGFKWSERTYERIVADRE--KVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 167
             EE +    GF  S     +++   +   +E+ +  +E  +  VP   DWR+K    P 
Sbjct: 83  LHEEFVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREKGAVTPV 142

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCW+FS                         G LEGQ+  KTGKLV  S+  L
Sbjct: 143 KDQGHCGSCWSFSAT-----------------------GALEGQHFRKTGKLVSLSEQNL 179

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
           V+C+ +   +GC+G   + + +Y     G+++EK YPY+  + E   C Y+   +   T 
Sbjct: 180 VDCSTKYGNNGCNGGLMDNAFQYVKDNKGIDTEKAYPYEAIDDE---CHYNPKAIGA-TD 235

Query: 285 KDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           K F+    G E  +KK L   GP+SV +++        +     +  C    L H VL V
Sbjct: 236 KGFVDIPQGDEKALKKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAV 295

Query: 343 GYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           GYG  +D   YWLV+NSWG    D+G+ K+ R   N CGI   A Y  +
Sbjct: 296 GYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRENHCGIATTASYPLV 344


>gi|157864849|ref|XP_001681133.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124427|emb|CAJ02283.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGKDWGEKGYVRVTMGVNAC 329


>gi|157864851|ref|XP_001681134.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124428|emb|CAJ02284.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|378943050|gb|AFC76266.1| cathepsin L-like protease [Leishmania major]
 gi|378943052|gb|AFC76267.1| cathepsin L-like protease [Leishmania major]
 gi|378943054|gb|AFC76268.1| cathepsin L-like protease [Leishmania major]
 gi|378943058|gb|AFC76270.1| cathepsin L-like protease [Leishmania major]
 gi|394331737|gb|AFN27091.1| cysteine protease [Leishmania major]
 gi|394331741|gb|AFN27093.1| cysteine protease [Leishmania major]
 gi|394331747|gb|AFN27096.1| cysteine protease [Leishmania major]
 gi|394331749|gb|AFN27097.1| cysteine protease [Leishmania major]
 gi|394331751|gb|AFN27098.1| cysteine protease [Leishmania major]
 gi|394331753|gb|AFN27099.1| cysteine protease [Leishmania major]
 gi|394331755|gb|AFN27100.1| cysteine protease [Leishmania major]
 gi|394331757|gb|AFN27101.1| cysteine protease [Leishmania major]
 gi|394331759|gb|AFN27102.1| cysteine protease [Leishmania major]
 gi|394331761|gb|AFN27103.1| cysteine protease [Leishmania major]
 gi|394331763|gb|AFN27104.1| cysteine protease [Leishmania major]
 gi|394331765|gb|AFN27105.1| cysteine protease [Leishmania major]
 gi|394331767|gb|AFN27106.1| cysteine protease [Leishmania major]
 gi|394331769|gb|AFN27107.1| cysteine protease [Leishmania major]
 gi|394331771|gb|AFN27108.1| cysteine protease [Leishmania major]
 gi|394331773|gb|AFN27109.1| cysteine protease [Leishmania major]
 gi|394331775|gb|AFN27110.1| cysteine protease [Leishmania major]
 gi|394331777|gb|AFN27111.1| cysteine protease [Leishmania major]
 gi|394331779|gb|AFN27112.1| cysteine protease [Leishmania major]
 gi|394331781|gb|AFN27113.1| cysteine protease [Leishmania major]
 gi|394331783|gb|AFN27114.1| cysteine protease [Leishmania major]
 gi|394331785|gb|AFN27115.1| cysteine protease [Leishmania major]
 gi|394331787|gb|AFN27116.1| cysteine protease [Leishmania major]
 gi|394331789|gb|AFN27117.1| cysteine protease [Leishmania major]
 gi|394331791|gb|AFN27118.1| cysteine protease [Leishmania major]
 gi|394331793|gb|AFN27119.1| cysteine protease [Leishmania major]
 gi|394331795|gb|AFN27120.1| cysteine protease [Leishmania major]
 gi|394331797|gb|AFN27121.1| cysteine protease [Leishmania major]
 gi|394331799|gb|AFN27122.1| cysteine protease [Leishmania major]
 gi|394331801|gb|AFN27123.1| cysteine protease [Leishmania major]
 gi|394331803|gb|AFN27124.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|33333700|gb|AAQ11968.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 159/337 (47%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E + ME +      DA DWR++    PA DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNSEDIDMEEK------DAVDWREEGAVTPAKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|394331826|gb|AFN27132.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+    L   S+ QLV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHGLTALSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +++G   +C+     V     + ++    S
Sbjct: 188 CSGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIEGYMTIESS 247

Query: 294 ETMKKI-LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET+K   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVKGAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|403302736|ref|XP_003942009.1| PREDICTED: cathepsin K isoform 2 [Saimiri boliviensis boliviensis]
          Length = 383

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 29/244 (11%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G                        L
Sbjct: 166 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------AL 202

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANG 267
           EGQ   KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G
Sbjct: 203 EGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---G 259

Query: 268 EKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           ++  C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     
Sbjct: 260 QEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYY 319

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
           DE+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 320 DESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 379

Query: 386 YATI 389
           +  +
Sbjct: 380 FPKM 383


>gi|52546912|gb|AAU81589.1| cysteine proteinase [Petunia x hybrida]
          Length = 257

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 126/260 (48%), Gaps = 58/260 (22%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD +DWR+K       +Q +CGSCW+FS  G                        +EG 
Sbjct: 24  LPDDFDWREKGAVTGVKNQGSCGSCWSFSTTG-----------------------AVEGA 60

Query: 212 YAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYP 261
           + + TG+LV  S+ QLV+C  +C         +GC G     + EYT +AG L+ EKDYP
Sbjct: 61  HFLATGELVSLSEQQLVDCDHECDAEQQNECDAGCGGGLMTTAFEYTLKAGGLQREKDYP 120

Query: 262 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG- 320
           Y   +G   KC +DKSK+        +     + +   L K+GPL+V +N+  +  Y G 
Sbjct: 121 YTGRDG---KCHFDKSKIAASVANFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGG 177

Query: 321 --TPI---RKNDETCSPYDLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGF 368
              P+   ++ D         H VLLVGYG       +    PYW+++NSWG    ++G+
Sbjct: 178 VSCPLICFKRQD---------HGVLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGY 228

Query: 369 FKIERGNNACGIEQIAGYAT 388
           +KI RG N CG++ +    T
Sbjct: 229 YKICRGRNICGVDAMVSTVT 248


>gi|33333696|gb|AAQ11966.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 159/337 (47%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E   ME EKD     A DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDME-EKD-----AVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEEYGNNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DETC       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DETCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|394331824|gb|AFN27131.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 138/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C       + E+        + +E  YPY ++ G   +C+     V       ++    S
Sbjct: 188 CRARLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSIQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y     R    +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYQ----RGVVTSCAGMPLNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|79314271|ref|NP_001030812.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|332644501|gb|AEE78022.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 53/327 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGTS--EFSDRSPEEILC 118
           +F  F  + G++Y + EE+K RF  FK++       +KK   Y  S  +F+D + +E   
Sbjct: 58  SFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQ- 116

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
               ++     +   A  +   K+      +  VPD  DWR+  +  P  +Q  CGSCW 
Sbjct: 117 ----RYKLGAAQNCSATLKGSHKI-----TEATVPDTKDWREDGIVSPVKEQGHCGSCWT 167

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA   +  G
Sbjct: 168 FSTTG-----------------------ALEAAYHQAFGKGISLSEQQLVDCAGTFNNFG 204

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C G     + EY  +  GL++E+ YPY   +G    C +    + +       +     +
Sbjct: 205 CHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---GCKFSAKNIGVQVRDSVNITLGAED 261

Query: 295 TMKKILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
            +K  +    P+SV    +++H+   Y       N    +P D+ HAVL VGYG +D++P
Sbjct: 262 ELKHAVGLVRPVSVAF--EVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVP 319

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNAC 378
           YWL++NSWG    D G+FK+E G N C
Sbjct: 320 YWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 149/350 (42%), Gaps = 72/350 (20%)

Query: 68  FKAFIVKRGRQYAND-EEIKERFEYFK--------QDGHKKHERYGTSEFSDRSPEEILC 118
           F AF+ + G++Y+   EE   R   F                 R+G + FSD +PEE   
Sbjct: 54  FAAFVRRHGKEYSGGAEEYARRLRVFAANLARAAAHQALDPGARHGVTPFSDLTPEEFQA 113

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           + TG +          A R   E++         +P ++DWR K        Q  CGSCW
Sbjct: 114 RLTGLQQQGTNNNMPAAARATAEELAT-------LPASFDWRAKGAVTEVKMQGMCGSCW 166

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC--- 234
           AFS  G                        +EG + + TGKL+  S+ QLV+C   C   
Sbjct: 167 AFSTTGA-----------------------VEGAHFVATGKLLNLSEQQLVDCDHTCDAV 203

Query: 235 ------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 286
                 SGC G     +  Y  +A GL  +  YPY  A G    C +D +KV +  T   
Sbjct: 204 AKNECDSGCSGGLMTNAYTYLIRAGGLMEQAAYPYTGAQG---TCRFDANKVAVRVTSFT 260

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVG 343
            +  +  + ++  L + GPL+V LN+  +  Y G    P+      C    + H VLLVG
Sbjct: 261 AVPPDDEDQIRASLVRAGPLAVGLNAAFMQTYLGGVSCPL-----LCPRKLINHGVLLVG 315

Query: 344 YGKQDNI-------PYWLVRNSWGPIGPDEGFFKIERG---NNACGIEQI 383
           YG +          PYW+++NSWG    + G++++ RG    N CG++ +
Sbjct: 316 YGARGLAPLRLGYRPYWIIKNSWGKEWGEGGYYRLCRGARNRNVCGVDSM 365


>gi|256077193|ref|XP_002574892.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230781|emb|CCD77198.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 457

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 147/340 (43%), Gaps = 49/340 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 113
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 153 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 211

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 212 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 264

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C   
Sbjct: 265 GSCWAFSTTGN-----------------------VESQWFRKTGKLLSLSEQQLVDCDGL 301

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GL  E +YPY   N    KC      V ++        
Sbjct: 302 DDGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLT 356

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 349
                +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N
Sbjct: 357 QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKN 416

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 417 EPFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 456


>gi|157864855|ref|XP_001681136.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124430|emb|CAJ02286.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMTAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|343477207|emb|CCD11901.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 45/340 (13%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 DSSWAFSAIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTD 184

Query: 234 CSGCDGCFFEPS---IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC G F +P+   I ++++  + +E+ YPY +  G    C      V           
Sbjct: 185 DFGCRGGFSDPAFKWILWSNKGNVFTEQSYPYASGGGNVPTCKMSGKVVGAKISNRLYLP 244

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + + + L + GP+++ +++     Y G  +     +C   ++ +  LLVGY      
Sbjct: 245 EDEDMITEWLARKGPVAIAVDATSFQSYTGGVL----TSCISKEMNYGALLVGYDDTSKP 300

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+++NSW     +EG+ +IE+G N C ++ +   A + 
Sbjct: 301 PYWIIKNSWSKGWGEEGYIRIEKGTNQCLVKNLPSSAVVS 340


>gi|403371627|gb|EJY85692.1| Cysteine protease [Oxytricha trifallax]
          Length = 384

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 172/397 (43%), Gaps = 56/397 (14%)

Query: 13  KAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFI 72
           K ++ I     + G  + L L  ++  I  Q     D + +   +   N  +   F  F+
Sbjct: 24  KGLLKIVGTVAIVGTVAALALFGIS--INSQNGGLSDRMNLASKV---NPEVETAFNNFL 78

Query: 73  VKRGRQYANDEEIKERFEYFKQ--DGHKKHE-------RYGTSEFSDRSPEEILCKTGFK 123
            +  + +   EE + R   F+   +  K H        + G ++FSD S  EI     FK
Sbjct: 79  ARHSKSFLTKEEFRARLSNFRNTFEEVKLHNSIQGSNFKMGLNQFSDWSQSEIDEMLQFK 138

Query: 124 WSERTYERIVADREKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 182
               T E    D E +++ L++ + D    P + DWR K    P  DQ  C SC+ FS A
Sbjct: 139 EPLDTDEDNTND-EDLDQTLLKADGDLLQAPASIDWRAKGAVTPVLDQGRCSSCYTFSAA 197

Query: 183 GKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ---CSGCDG 239
                                    +EG Y IKTGKL+E SK QL+EC+ +    SGC G
Sbjct: 198 H-----------------------AVEGAYQIKTGKLIEMSKQQLLECSGRPYGNSGCRG 234

Query: 240 CFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKK 298
            +   + +Y     L+S+  YPY    G    C +D SK +        L  N    +  
Sbjct: 235 GYMTNAYKYLKDNKLQSDASYPYTGTAGT---CKHDASKGITNVVSYTALPANDPTALLN 291

Query: 299 ILYKYGPLSVLL--NSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
            + K  P+S+ +  +S  +  Y    +   D      ++ HAV LVGYG ++ I YW+++
Sbjct: 292 AVAKQ-PVSIAIYASSSALLAYKSGIV---DTAKCGTNVNHAVTLVGYGSENGIDYWIIK 347

Query: 357 NSWGPIGPDEGFFKIER----GNNACGIEQIAGYATI 389
           NSWG    ++GF +I+R    G   CGI +++   T+
Sbjct: 348 NSWGAKWGEKGFIRIKRDMTKGPGICGIYKLSSIPTV 384


>gi|391333248|ref|XP_003741031.1| PREDICTED: uncharacterized protein LOC100898636 [Metaseiulus
           occidentalis]
          Length = 642

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 133/291 (45%), Gaps = 37/291 (12%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           R G S F+D +PEE+        +      +        + + +  +   + +A DWR++
Sbjct: 384 RMGLSRFTDSTPEEMRAMRCLNIN------VSMTTGGPHEEVFDAIESSDLSEAIDWRQQ 437

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +Q  CGSCWAFS  G                        +EGQ+   TG+L  
Sbjct: 438 GYVTPVKNQGNCGSCWAFSATGA-----------------------VEGQHFKATGRLES 474

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV- 279
            S+  LV+C K+  GCDG FFE + +Y     G+ +E  YPY+  +G    C + +  + 
Sbjct: 475 LSEQNLVDCVKESKGCDGGFFEQAFQYIKDNGGINTEDSYPYEAFDG---SCRFREDSIG 531

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              +G   +       ++K +   GP+SV ++       N       + +CS  +L HAV
Sbjct: 532 ATVSGYQTIPKGSEADLQKAVSTIGPISVAIDVSNPSFQNYREGVYYEPSCSSSNLDHAV 591

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYAT 388
           L+VGYG      YWLV+NSWG    ++G+ ++ R  GNN CGI   A Y T
Sbjct: 592 LVVGYGSDGGEDYWLVKNSWGTSFGEQGYVRMARNKGNN-CGIASAAAYPT 641



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 44/292 (15%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           R G S  +D +P E+       ++       + ++   +  L  +++   +P+A DW ++
Sbjct: 64  RMGLSRLTDATPAEVQALKCLNFT-------LPNKTSRKSTLGTLQRQ-DLPEAVDWTQQ 115

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  DQ  CG+CW F+  G                        +EGQ+   TG LV 
Sbjct: 116 GYVTPVKDQGKCGACWTFAATGA-----------------------IEGQHFKATGNLVS 152

Query: 222 FSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSK 278
            S+  +++C K  +  GC G  F  + +Y  +  G+++E+ YPY+ + G    C + +  
Sbjct: 153 LSEQNILDCVKTATSNGCSGGLFVEAFDYLKNSGGIDAEESYPYEASGG---TCRFRQDS 209

Query: 279 VK-LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDL 335
           V    +G   +       +++ +   GP+SV ++S       Y G    + +  C+ + L
Sbjct: 210 VAATVSGYQAISAGNEAELQEAVATIGPISVGIDSGHPGFQHYTGGIYYEPE--CTEH-L 266

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
            HAVL+VGYG ++   YWLV+NSWG     +G+ K+ R  NN CGI   A Y
Sbjct: 267 SHAVLVVGYGTENGEDYWLVKNSWGASYGLQGYIKMARNRNNNCGIATGAAY 318


>gi|114559412|ref|XP_001171151.1| PREDICTED: cathepsin K isoform 4 [Pan troglodytes]
 gi|410221358|gb|JAA07898.1| cathepsin K [Pan troglodytes]
 gi|410248298|gb|JAA12116.1| cathepsin K [Pan troglodytes]
 gi|410301088|gb|JAA29144.1| cathepsin K [Pan troglodytes]
 gi|410351445|gb|JAA42326.1| cathepsin K [Pan troglodytes]
          Length = 329

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + EY  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFEYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYFDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|410968296|ref|XP_003990643.1| PREDICTED: cathepsin K [Felis catus]
          Length = 330

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 154/345 (44%), Gaps = 51/345 (14%)

Query: 62  ENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS-----------EF 108
           E IL+T ++ +    G+QY N  +EI  R  + K   H        S             
Sbjct: 20  EVILDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHL 79

Query: 109 SDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
            D + EE++ K TG K        +   R +    L   + +   PD+ D+RKK    P 
Sbjct: 80  GDMTSEEVVQKMTGLK--------VPPSRSRSNDTLYIPDWESRAPDSIDYRKKGYVTPV 131

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S   L
Sbjct: 132 KNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSPQNL 168

Query: 228 VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGK 285
           V+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G 
Sbjct: 169 VDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGY 225

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG
Sbjct: 226 REIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYG 285

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 286 IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330


>gi|394331743|gb|AFN27094.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|205364757|gb|ACI04578.1| cysteine protease-like protein [Robinia pseudoacacia]
          Length = 335

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 151/357 (42%), Gaps = 76/357 (21%)

Query: 60  DNE----NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSE 107
           DNE    N    F  F  K  + YA  EE   RF  FK +    K H +      +G ++
Sbjct: 10  DNEDHVLNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNVRRAKLHAKLDPSAVHGVTK 69

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           FSD +P E           R +  +   R         +     +P+ +DWR K      
Sbjct: 70  FSDLTPSEF---------RRQFLGLKPLRLPEHAQKAPILPTHDLPEDFDWRDKGAVTHV 120

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q +CGSCWAFS  G                        LEG + + TG+LV  S  QL
Sbjct: 121 KNQGSCGSCWAFSTTG-----------------------ALEGSHFLATGELVSLSDQQL 157

Query: 228 VECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKS 277
           V+C   C         SGC+G     + EY  ++G ++ E+DYPY    G     A D++
Sbjct: 158 VDCDHVCDPEQYGACDSGCNGGLMNNAFEYILESGGVQREEDYPY---TGRDRGPAIDEA 214

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY---- 333
                +    +  +  + +   L K GPL++ +N+  +  Y G           PY    
Sbjct: 215 NAASVSNFSVVSLD-EDQISANLVKNGPLAIGINAVFMQTYIGG-------VSCPYICGK 266

Query: 334 DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           +L H VLLVGYGK           PYW+++NSWG    + G++KI RG N CG++ +
Sbjct: 267 NLDHGVLLVGYGKAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 323


>gi|431896622|gb|ELK06034.1| Cathepsin K [Pteropus alecto]
          Length = 330

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSRSRSNDTLYIPDWEGRAPDSVDYRKKGYV 128

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 129 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 165

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 166 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L            DE C+  +L HAVL V
Sbjct: 223 RGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYRKGVYYDENCNSDNLNHAVLAV 282

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 GYGIQKGRKHWIIKNSWGENWGNKGYVLMARNKNNACGIANLASFPRM 330


>gi|118197532|ref|YP_874244.1| cathepsin [Ectropis obliqua NPV]
 gi|113472527|gb|ABI35734.1| cathepsin [Ectropis obliqua NPV]
          Length = 299

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 44/320 (13%)

Query: 71  FIVKRGRQYANDEEIKERFEYFK---QDGHKKHERYGTS-----EFSDRSPEEILCK-TG 121
           F+    + Y +D E  +R+  F+   +D + K++  G++     +FSD S  EI+ K TG
Sbjct: 2   FVANYNKMYDDDLEKTKRYSIFRDNLRDINIKNKLNGSAVYRINKFSDLSTSEIVLKYTG 61

Query: 122 FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 181
              S    ER+  +     K ++  +  G  P  +DWR +N      +Q  CG+CWAF+ 
Sbjct: 62  L--SVPPTERLTTN---FCKTIVLDQPPGKGPLNFDWRHQNKVTSIKNQGVCGACWAFAT 116

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCF 241
                                     +E QYAIK    +  S+ Q+++C     GCDG  
Sbjct: 117 LAS-----------------------IESQYAIKHNVQINLSEQQMIDCDYVDMGCDGGL 153

Query: 242 FEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 300
              + E      G++ E +YPY+  N    +   D   VK+     ++     E +K +L
Sbjct: 154 LHTAFEQMIEMGGVKHEHEYPYEGIN-MNCRLNDDNFAVKIIGCYRYIVLQ-EEKLKDLL 211

Query: 301 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWG 360
              GP+ + +++  I +Y    I      C  + L HAVLLVGYG ++NIPYW ++N+WG
Sbjct: 212 RAVGPIPIAIDASGIANYYQGVIN----YCENHGLNHAVLLVGYGVENNIPYWTIKNTWG 267

Query: 361 PIGPDEGFFKIERGNNACGI 380
               + G+F++ +  NACG+
Sbjct: 268 EDWGENGYFRVRQNINACGM 287


>gi|449139100|gb|AGE89905.1| cathepsin-like cysteine proteinase [Spodoptera littoralis NPV]
          Length = 336

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 144/324 (44%), Gaps = 42/324 (12%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEIL-C 118
           F+ FI +  ++Y   ++  + F  FK++            H  YG ++FSD         
Sbjct: 33  FENFIKQHNKEYTTPDQRDDAFVNFKRNLVNMNAMNNISNHAVYGINKFSDIDKITFANV 92

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
             G   +    +    D  ++ + +         P+++DWRK +      +Q  CGSCWA
Sbjct: 93  HAGLVLTLNATDSNF-DPYRLCEFVTVAGPSARTPESFDWRKLHKVTKVKEQGVCGSCWA 151

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+  G                        +E QYAI    L++ S+ QL++C +   GCD
Sbjct: 152 FAAIGN-----------------------IESQYAILHDSLIDLSEQQLLDCDRIDQGCD 188

Query: 239 GCFFEPSI-EYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSETM 296
           G     +  E     G+E E DYPY+   G ++ C    SK  +     + +       +
Sbjct: 189 GGLMHLAFQEIMRIGGVEHEIDYPYQ---GIEYACRSAPSKFAVRLSHCYQYDLRDERKL 245

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
            ++LYK GP++V ++   I DY           C+   L HAVLLVGYG +++ PYW+ +
Sbjct: 246 LELLYKNGPIAVAIDCRDIIDYRSGIA----TVCNDNGLNHAVLLVGYGIENDTPYWIFK 301

Query: 357 NSWGPIGPDEGFFKIERGNNACGI 380
           NSWG    + G+F+  R  NACG+
Sbjct: 302 NSWGSNWGENGYFRARRNINACGM 325


>gi|394331805|gb|AFN27125.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKACADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVSTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 146/339 (43%), Gaps = 55/339 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERY--GTSEFSDRSPEEILC 118
            F  F  + G+ Y   EE+K RF  F       +  +KK   Y  G +EF+D        
Sbjct: 59  AFARFAHRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFAD-------- 110

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSC 176
                W E    R+ A  +     L    K  +G +P   DWR+  +  P  +Q  CGSC
Sbjct: 111 ---LTWEEFRKHRLGA-AQNCSATLKGNHKLTNGLLPLKKDWREVGIVTPVKNQGHCGSC 166

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE  Y    GK +  S+ QLV+CA+  + 
Sbjct: 167 WTFSTTGA-----------------------LEAAYVQAFGKAIFLSEQQLVDCARAYNN 203

Query: 236 -GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNG 292
            GC+G     + EY     GL++E+ YPY   +G    C +    + +       +    
Sbjct: 204 FGCNGGLPSQAFEYIKANGGLDTEEAYPYTGVDG---VCKFSSENIGVQVLDSVNITLGA 260

Query: 293 SETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNI 350
            + +K  +    P+SV            + +  +D TC  +P D+ HAV+ VGYG ++++
Sbjct: 261 EDELKDAVAFVRPVSVAFEVVSGFRLYKSGVYTSD-TCGNTPMDVNHAVVAVGYGVENDV 319

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYWL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 320 PYWLIKNSWGADWGDNGYFKMEMGKNMCGVATCASYPVV 358


>gi|151547430|gb|ABS12459.1| cysteine protease Cp [Citrus sinensis]
          Length = 361

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 144/336 (42%), Gaps = 49/336 (14%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEILC 118
           +F  F  + G+ Y + EE+K RF  F ++              R G ++F+D S EE   
Sbjct: 61  SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQ- 119

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
               +      +   A  +   K+  +V     +P+  DWR+  +  P  DQ  CGSCW 
Sbjct: 120 ----RHRLGAAQNCSATTKGNHKLTADV-----LPETKDWRESGIVSPVKDQGHCGSCWT 170

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE  Y    GK +  S+ QLV+CA+  +  G
Sbjct: 171 FSTTGS-----------------------LEAAYHQAFGKGISLSEQQLVDCAQAFNNQG 207

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSE 294
           C+G     + EY  +  GL++E+ YPY   +G    C +    V +       +     +
Sbjct: 208 CNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDG---VCKFSSENVGVQVLDSVNITLGAED 264

Query: 295 TMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYW 353
            ++  +    P+SV     D    Y            +P D+ HAV+ VGYG +D +PYW
Sbjct: 265 ELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYW 324

Query: 354 LVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           L++NSWG    D G+FKI+ G N CGI   A Y  +
Sbjct: 325 LIKNSWGENWGDHGYFKIKMGKNMCGIATCASYPVV 360


>gi|34811401|pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F
 gi|34811402|pdb|1M6D|B Chain B, Crystal Structure Of Human Cathepsin F
          Length = 214

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 31/242 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P  WDWR K       DQ  CGSCWAFS+ G                        +EGQ
Sbjct: 1   APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN-----------------------VEGQ 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGE 268
           + +  G L+  S+ +L++C K    C G    PS  Y+   +  GLE+E DY Y+   G 
Sbjct: 38  WFLNQGTLLSLSEQELLDCDKMDKACMGGL--PSNAYSAIKNLGGLETEDDYSYQ---GH 92

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C +   K K++           + +   L K GP+SV +N+  +  Y     R    
Sbjct: 93  MQSCQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRP 152

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
            CSP+ + HAVLLVGYG++ ++P+W ++NSWG    ++G++ + RG+ ACG+  +A  A 
Sbjct: 153 LCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAV 212

Query: 389 ID 390
           +D
Sbjct: 213 VD 214


>gi|157864853|ref|XP_001681135.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|157864857|ref|XP_001681137.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124429|emb|CAJ02285.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124431|emb|CAJ02287.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|394331739|gb|AFN27092.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHCRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|195150387|ref|XP_002016136.1| GL11434 [Drosophila persimilis]
 gi|194109983|gb|EDW32026.1| GL11434 [Drosophila persimilis]
          Length = 372

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 154/337 (45%), Gaps = 55/337 (16%)

Query: 65  LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 112
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 113 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAF+  G                        +EG    KTG L   S+  LV+C 
Sbjct: 176 TCGSCWAFATTG-----------------------AIEGHIFRKTGTLPNLSEQNLVDCG 212

Query: 232 K---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGK 285
                 SGCDG F E ++ + +  Q G+     YPY +    K  C Y K+      TG 
Sbjct: 213 TLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGF 269

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
             +       MKK++   GPL+  LN    L+   +G     +DE C+  +  H+VL+VG
Sbjct: 270 ATIPPKDETLMKKVIATLGPLACSLNGLETLLQYKSGI---YSDEKCNEGEPNHSVLVVG 326

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG +    YW+V+NSW  +  +EG+F++ RGNN CGI
Sbjct: 327 YGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGI 363


>gi|33333714|gb|AAQ11975.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 323

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 72/352 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L         +    + +D    E      E D    DA DWRK+    P  +Q
Sbjct: 78  MTHEEFLDLLKL----QGVPALPSDAVYFE------ETDIEEKDAVDWRKEGAVTPVKNQ 127

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 128 GHCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 164

Query: 231 AKQC---SGCDGCFFEPSIEYTHQAGLESEKDYPYK------NANGEKFKCAYDKSKVKL 281
           A +     GC+G     + ++    G+++E+ YPYK        NGE        +KVK 
Sbjct: 165 ATEYYGNEGCNGGLMGQAFDFVEDEGIQTEESYPYKAKRSICQMNGEYV------TKVKT 218

Query: 282 FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS----PYDLGH 337
           +     L  N  E  + +  K GP++V +++  +  Y+   +   DE C       DL H
Sbjct: 219 Y----HLLLNEQEIARAVSAK-GPVAVAIDASQLSFYDQGIV---DEKCKCSKKREDLNH 270

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            VL+VGYG ++ + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 271 GVLVVGYGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGNYNTYPVL 322


>gi|397492864|ref|XP_003817340.1| PREDICTED: cathepsin K [Pan paniscus]
          Length = 343

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 90  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 141

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 142 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 178

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 179 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 235

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 236 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 295

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 296 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 343


>gi|15617524|ref|NP_258322.1| cathepsin-like cysteine proteinase [Spodoptera litura NPV]
 gi|37077642|sp|Q91BH1.1|CATV_NPVST RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15553260|gb|AAL01738.1|AF325155_50 cathepsin-like cysteine proteinase [Spodoptera litura NPV]
          Length = 337

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 35/236 (14%)

Query: 150 GP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPG 206
           GP    P+++DWRK N      +Q  CGSCWAF+  G                       
Sbjct: 121 GPSARTPESFDWRKLNKVTKVKEQGVCGSCWAFAAIGN---------------------- 158

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI-EYTHQAGLESEKDYPYKNA 265
            +E QYAI    L++ S+ QL++C +   GCDG     +  E     G+E E DYPY+  
Sbjct: 159 -IESQYAIMHDSLIDLSEQQLLDCDRVDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQ-- 215

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLH-FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
            G ++ C    SK+ +     + +       + ++LYK GP++V ++   I DY      
Sbjct: 216 -GIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIA- 273

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
                C+   L HAVLLVGYG +++ PYW+ +NSWG    + G+F+  R  NACG+
Sbjct: 274 ---TVCNDNGLNHAVLLVGYGIENDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326


>gi|403376023|gb|EJY87990.1| Cathepsin L [Oxytricha trifallax]
          Length = 343

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 168/370 (45%), Gaps = 82/370 (22%)

Query: 46  ARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---- 101
           A  +  AIE  +T DN      F  ++ K G+ Y   EE + R+E ++++  K  +    
Sbjct: 27  ASTNLFAIE--VTQDNV----AFANYLAKYGKSYGTKEEFQFRYEQYQKNMAKVAQYNGQ 80

Query: 102 -----RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPD 154
                R G ++F+D +PEE             Y+ ++  + + + M +E     +   P 
Sbjct: 81  NGNTFRLGINKFTDYTPEE-------------YKVLLGYKPQSKPMTLEASYLSEENTPA 127

Query: 155 AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI 214
           + DWR+K    P  DQ  CGSCWAFS                         G LEG Y I
Sbjct: 128 SIDWREKGAVTPVKDQGQCGSCWAFSAT-----------------------GALEGHYQI 164

Query: 215 KTGKLVEFSKSQLVECAKQC-SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCA 273
              KL+  S+ QLV+C+    +GC+G     + +Y  +  +E E DY Y   + +  KC+
Sbjct: 165 SNNKLISISEQQLVDCSHDGNNGCNGGEMYLAFDYASKNKMELESDYVY---HAKDEKCS 221

Query: 274 YDKSKVKLFTGKDFLHF-----NGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKN 326
           Y+ SK K+    +  HF     N    +K  L   GP+SV + +D  +   Y+G  +  N
Sbjct: 222 YEASKGKM----EADHFQRVPKNSPAQLKAALAN-GPVSVAIEADNEVFQAYDGGIL--N 274

Query: 327 DETCSPYDLGHAVLLVGYG-----KQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACG 379
            + C   +L H VL VG+G     KQD   Y++V+NSWG    D GF KI    G   CG
Sbjct: 275 SKECGT-NLDHGVLAVGFGHDEASKQD---YFIVKNSWGQYWGDHGFIKIAAVDGEGICG 330

Query: 380 IEQIAGYATI 389
           I+  A Y  +
Sbjct: 331 IQMDAVYPIV 340


>gi|256077197|ref|XP_002574894.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230780|emb|CCD77197.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 419

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 147/340 (43%), Gaps = 49/340 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH-----ER----YGTSEFSDRSP 113
           N+ E +  F +K  +QY   E+ + RF  FK +  K       ER    YG + +SD + 
Sbjct: 115 NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTT 173

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 174 DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 226

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C   
Sbjct: 227 GSCWAFSTTGN-----------------------VESQWFRKTGKLLSLSEQQLVDCDGL 263

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GL  E +YPY   N    KC      V ++        
Sbjct: 264 DDGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLT 318

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 349
                +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N
Sbjct: 319 QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKN 378

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            P+W+V+NSWG    + G+F++ RG+  CGI  +A  A I
Sbjct: 379 EPFWIVKNSWGVEWGENGYFRMYRGDGTCGINTVATSALI 418


>gi|167427529|gb|ABZ80401.1| cathepsin L4, partial [Fasciola hepatica]
          Length = 303

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 119/249 (47%), Gaps = 35/249 (14%)

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
            D  VP++ DWR+        DQ  CGSCWAFS  G                        
Sbjct: 81  NDRAVPESIDWREFGYVTEVKDQGDCGSCWAFSTTGA----------------------- 117

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNA 265
           +EGQY       + FS+ QLV+C+      GC+G F E + EY  + GLE+E  YPYK  
Sbjct: 118 VEGQYMKNPKANISFSEQQLVDCSGDYGNHGCNGGFMENAYEYLERRGLETESSYPYK-- 175

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTP 322
             E+  C YD     +     F+  +G E+ +  ++   GP +V ++  SD +    G  
Sbjct: 176 -AEEGPCKYDSRLGVVEVFGYFIEHSGIESKLAHLVGDKGPAAVAVDVESDFLMYRGGIY 234

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 381
             +N   CS   L HA+L+VGYG QD   YW+V+NSWG +  D G+ ++ R  +N CGI 
Sbjct: 235 ASRN---CSSEKLNHAMLVVGYGTQDGTDYWIVKNSWGSLWGDHGYIRMARNRDNMCGIA 291

Query: 382 QIAGYATID 390
             A    ++
Sbjct: 292 SAASVPVVE 300


>gi|428175797|gb|EKX44685.1| hypothetical protein GUITHDRAFT_71985 [Guillardia theta CCMP2712]
          Length = 354

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 160/362 (44%), Gaps = 83/362 (22%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 115
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 167
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCSATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q  CGSCW FS A                         LE  +AIKTG++V  S+ QL
Sbjct: 139 KNQGTCGSCWTFSTAAA-----------------------LESLHAIKTGEMVLLSEQQL 175

Query: 228 VECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE----KFKCAYDK---- 276
           V+CA   + +GC+G     + EY  +  GL   ++YPY   +G        CA+D     
Sbjct: 176 VDCAADFKNNGCNGGLPSQAFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKP 235

Query: 277 --------SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
                   SKV  FT  D +      +MK ++  + P+SV     +DL H  +G     +
Sbjct: 236 WSVGAKKVSKVANFTPGDEI------SMKTVVGSHNPISVAFEVVADLRHYSSGV---YS 286

Query: 327 DETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
             TC  +P  + HAVL VGYG +  IPYW ++NSWG    D G+FKI+RG+N CGI   A
Sbjct: 287 SPTCVGTPDKVNHAVLAVGYGTEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNMCGISVCA 346

Query: 385 GY 386
            +
Sbjct: 347 SF 348


>gi|395729888|ref|XP_002810309.2| PREDICTED: cathepsin K [Pongo abelii]
          Length = 343

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 90  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 141

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 142 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 178

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 179 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 235

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 236 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 295

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 296 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 343


>gi|1848231|gb|AAB48120.1| cathepsin L-like protease [Leishmania major]
          Length = 443

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|165969032|ref|YP_001650932.1| peptidase [Orgyia leucostigma NPV]
 gi|164663528|gb|ABY65748.1| peptidase [Orgyia leucostigma NPV]
          Length = 328

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 150/335 (44%), Gaps = 47/335 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F++F+    + Y +D E  +R+  FK +  + + +        Y  ++FSD S  EI+ K
Sbjct: 29  FESFVANYQKNYNDDLEKSKRYTIFKDNLEEINVKNRLNDTAVYRINKFSDLSKTEIISK 88

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
            TG      T            K ++  +  G  P  +DWR++N      +Q +CG+CWA
Sbjct: 89  YTGLNAPSET--------TNFCKTIVLDQPPGKGPLNFDWRQQNKVTSIKNQGSCGACWA 140

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+                           +E QYAI+  + +  S+ QL++C     GC 
Sbjct: 141 FATLAS-----------------------IESQYAIRNDRHINLSEQQLIDCDYVDMGCY 177

Query: 239 GCFFEPSIEYTHQ-AGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSETM 296
           G     + E   Q  G++ E +YPY   N + +     D S V    G         E +
Sbjct: 178 GGLLHTAFEQMIQMGGVKQEHEYPYAGVNKQCELNDITDDSFVVRIKGCYRYVVVREEKL 237

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           K +L   GP+ + +++  I +Y    I      C  Y L HAVLLVGYG  + +PYW  +
Sbjct: 238 KDLLRAVGPIPIAIDASGIVNYYKGVI----NYCENYGLNHAVLLVGYGVDNGVPYWTFK 293

Query: 357 NSWGPIGPDEGFFKIERGNNACGI-EQIAGYATID 390
           N+WG    + G+F++ +  NACG+  ++A  A ID
Sbjct: 294 NTWGVDWGENGYFRLRQNINACGMANELASSAVID 328


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 165/348 (47%), Gaps = 55/348 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 111
           + E + AF +   +QY +D E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 112 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        LEGQ+  K+GKLV  S+  LV+C
Sbjct: 139 GQCGSCWSFSATGS-----------------------LEGQHFRKSGKLVSLSEQNLVDC 175

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +++   +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + +
Sbjct: 176 SEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGY 231

Query: 288 LHF-NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           +   +G+E  ++  +   GP+SV +++       Y+G    + D  CS   L H VL+VG
Sbjct: 232 VDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVG 289

Query: 344 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG +D+   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 290 YGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRDNNCGIATEASYPLV 337


>gi|1730100|sp|P36400.2|LMCPB_LEIME RecName: Full=Cysteine proteinase B; Flags: Precursor
 gi|899313|emb|CAA90236.1| LmCPb2.8 [Leishmania mexicana]
          Length = 443

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|130502110|ref|NP_001076110.1| cathepsin K precursor [Oryctolagus cuniculus]
 gi|1168794|sp|P43236.1|CATK_RABIT RecName: Full=Cathepsin K; AltName: Full=Protein OC-2; Flags:
           Precursor
 gi|454187|dbj|BAA03125.1| OC-2 protein [Oryctolagus cuniculus]
          Length = 329

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE CS  ++ HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCSSDNVNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|56758920|gb|AAW27600.1| SJCHGC00098 protein [Schistosoma japonicum]
 gi|226476138|emb|CAX72159.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 159/344 (46%), Gaps = 58/344 (16%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV---LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 346
               +T++K +Y+YGP+SV    LNS ++  Y       ND  C   D+ HAVL+VGYGK
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALNSLIM--YKSGVFESND--CKYADINHAVLVVGYGK 286

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +    YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 287 EHGKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|426331364|ref|XP_004026652.1| PREDICTED: cathepsin K [Gorilla gorilla gorilla]
          Length = 329

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPLSHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|116488416|gb|AAB41670.2| secreted cathepsin L 1 [Fasciola hepatica]
          Length = 326

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C++    +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      +K ++   GP +V ++  SD +   +G      
Sbjct: 204 --CRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317


>gi|1749812|emb|CAA90237.1| cysteine proteinase LmCPB1 [Leishmania mexicana]
          Length = 359

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFCAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHTPQHYPKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + SK+ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    + HAVLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQVNHAVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|401430288|ref|XP_003886537.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491333|emb|CBZ40988.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 533

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 184

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 185 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 243

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 244 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 280

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 281 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 339

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 340 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 395

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 396 IKNSWGGDWGEQGYVRVVMGVNAC 419


>gi|332220191|ref|XP_003259241.1| PREDICTED: cathepsin K [Nomascus leucogenys]
          Length = 329

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|405958752|gb|EKC24846.1| Cathepsin L1 [Crassostrea gigas]
          Length = 290

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 51/330 (15%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYE 130
            +++RG   AN + I +  + F++  H      G +EF+D S EE L   G     R   
Sbjct: 2   LLIRRGIWEANLDYINQHNDEFQRGAHSY--TLGLNEFADLSHEEFLHLYGGGIRPRDSV 59

Query: 131 RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLL 190
               D + V      V+  G +P   DWRK+   GP G+Q ACGSCWAF+  G       
Sbjct: 60  SSDPDTDIV------VDTSG-LPLEVDWRKEGWVGPIGNQFACGSCWAFTATGA------ 106

Query: 191 QYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY 248
                            LEGQ   KTGKL+  S  Q+++C+++    GC+G   + + +Y
Sbjct: 107 -----------------LEGQVRNKTGKLIVLSVQQMMDCSEKWGNHGCEGGLMDAAFKY 149

Query: 249 THQ-AGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSETMKKILYKYGP 305
            H   G+ES   YPYK A   + KC ++KS V  K+   KD       E++   +   GP
Sbjct: 150 IHDVGGIESNASYPYKPA---EEKCKFNKSAVVAKVKGYKDLP--KSEESLMVAVATVGP 204

Query: 306 LSVLLNSDLIHDYNGTPIRK----NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGP 361
           +S  L++     ++   + K    ++  CS   + H++++VGYG  D   YW+ +NSWG 
Sbjct: 205 ISAALDAS----HSSFQLYKSGVYDEPNCSSGQVDHSLVVVGYGLMDGKKYWIAKNSWGT 260

Query: 362 IGPDEGFFKIERG-NNACGIEQIAGYATID 390
              D+G+  + +  NN CGI     Y  ++
Sbjct: 261 SWGDKGYILLSKDKNNQCGIANTLSYPILE 290


>gi|56754277|gb|AAW25326.1| unknown [Schistosoma japonicum]
          Length = 342

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 36  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 95

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 96  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 147

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 148 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 184

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 185 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 241

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+ 
Sbjct: 242 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYADINHGVLVVGYGKEH 299

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 300 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 341


>gi|56752859|gb|AAW24641.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVAVDSLIMYKSGVFESND--CKYADINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|401416324|ref|XP_003872657.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488881|emb|CBZ24131.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 443

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 156/340 (45%), Gaps = 49/340 (14%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS---------EFSDRSPEE 115
           + AF    G++Y ++ E   R + + ++  K    +E+Y  +         EF D    E
Sbjct: 50  WSAFKALHGKEYHSETEEYYRLKIYMENRLKIARHNEKYANNKASYKLAMNEFGDLLHHE 109

Query: 116 IL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
            +  + GFK + R+       RE    +  E  +D  +P   DWRKK    P  +Q  CG
Sbjct: 110 FVSTRNGFKRNYRS-----TPREGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVKNQGQCG 164

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ- 233
           SCWAFS  G                        LEGQ+  KTG++V  S+  LV+C+ + 
Sbjct: 165 SCWAFSTTGS-----------------------LEGQHFRKTGRMVSLSEQNLVDCSGKF 201

Query: 234 -CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDFLHF 290
             +GC+G   + + +Y     G+++E  YPY   NG    C ++KS V    TG   +  
Sbjct: 202 GNNGCEGGLMDNAFKYIKANGGIDTELSYPY---NGTDGICHFEKSDVGATDTGFVDIPE 258

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + +KK +   GP+SV +++        +    ++  CS   L H VL+VGYG +D  
Sbjct: 259 GNEQLLKKAVATVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGTKDGQ 318

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
            YWLV+NSWG    D+G+  + R   N CGI   A Y  +
Sbjct: 319 DYWLVKNSWGTTWGDDGYIYMTRNKENQCGIASSASYPLV 358


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 63/347 (18%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 113
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 114 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCW+FS                         G +EG   IKTG L   S+ QL++
Sbjct: 139 QGQCGSCWSFSA-----------------------NGAIEGAIQIKTGALRSLSEQQLMD 175

Query: 230 CAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 286
           C+      GC+G     + +Y  + G+E+E DY Y   +G    C Y +  V    TG  
Sbjct: 176 CSWDYGNQGCNGGLMPQAFQYAQRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYA 232

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
            L       +++ +   GP+SV +++     +   +G  + K   TCSPY + H VL+VG
Sbjct: 233 ELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVG 289

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG ++   YWLV+NSWG    ++G+ K+ R  NN CGI  +A Y T+
Sbjct: 290 YGAENGDAYWLVKNSWGSSWGEDGYLKMARNRNNMCGIASMASYPTV 336


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 149/348 (42%), Gaps = 57/348 (16%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEY-----------FKQDGHKKHERYGTSE 107
            DNE     +  F  +  + Y N+EE + R  +              D  +     G +E
Sbjct: 23  LDNE-----WNIFKKQYNKLYQNEEEARRRLVWESNLDFITLHNLAADRGEHTFWVGMNE 77

Query: 108 FSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           + D + EE      G++   +T    V          M     G +PD  DWR K    P
Sbjct: 78  YGDMTNEEFTKTMNGYRMRNKTSNAPV---------FMPPNNMGDLPDTVDWRPKGYVTP 128

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             +Q  CGSCW+FS  G                        LEGQ   KTGKLV  S+  
Sbjct: 129 IKNQGQCGSCWSFSATGS-----------------------LEGQTFKKTGKLVSLSEQN 165

Query: 227 LVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF- 282
           LV+C+K+    GC+G   + +  Y     G+++E  YPYK  +G   KC +  + V    
Sbjct: 166 LVDCSKKQGNHGCEGGLMDDAFTYIKANNGIDTEASYPYKARDG---KCEFKSADVGATD 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           TG   +     E +K+ +   GP+SV +++  +          +D  CS   L H VL V
Sbjct: 223 TGFVDIKTKDEEALKQAVATVGPISVAIDASHMSFQLYRTGVYHDWFCSQTKLDHGVLAV 282

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG +D+  YWLV+NSWG     +G+ ++ R   N CGI   A Y T+
Sbjct: 283 GYGTEDSKDYWLVKNSWGESWGQKGYIQMSRNRRNNCGIATSASYPTV 330


>gi|15824691|gb|AAL09443.1| cysteine protease [Leishmania donovani]
          Length = 443

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A     LV  S+ QLV C  + +G
Sbjct: 151 WAFSAVGN-----------------------IESQWARVGHGLVSLSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY--THQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++    +
Sbjct: 188 CNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PY
Sbjct: 248 ETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVAMGKNAC 329


>gi|10798511|emb|CAC12806.1| cathepsin L1 [Fasciola hepatica]
          Length = 311

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 93  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGT-----------------------MEGQ 129

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + EY  + GLE+E  YPY+   G+ 
Sbjct: 130 YMKNEKTSISFSEQQLVDCSGPWGNNGCSGGLMENAYEYLKRFGLETESSYPYRAVEGQ- 188

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      +K ++   GP  ++V   SD +   +G      
Sbjct: 189 --CRYNEQLGVAKVTGYYTVHSGSEVELKNLVGSEGPAAIAVEAESDFMMYRSGI---YQ 243

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TC P+ L HAVL VGYG QD   YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 244 SQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 302


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 151/345 (43%), Gaps = 63/345 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 118
           F+ + +K  + YA  EE   R   +           +GH     +  ++F+D +  E   
Sbjct: 43  FERWTIKHKKTYATAEEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEF-- 100

Query: 119 KTGFKWSERTYERIVAD--REKVEKMLMEVEKDG-PVPDAWDWRKKNVTGPAGDQAACGS 175
                  +R Y    +   R       M V+K+    P A DWRK+NV  P  DQ +CGS
Sbjct: 101 -------KRIYLSSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGS 153

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWAFS     S +L                       A+KTG+L+  SK QL++C++  +
Sbjct: 154 CWAFSATSCLSAHL-----------------------ALKTGQLISLSKQQLLDCSRSFN 190

Query: 236 --GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFN 291
             GC G     + EY  +  G+ESE+DYPYK+    + KC +  S V    TG       
Sbjct: 191 NRGCKGGLPSQAFEYIRYNGGIESERDYPYKD---REEKCHFKPSLVAATVTGVVNFTQG 247

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHD------YNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             + +   L   GP+S+ ++S           Y G    KN     P  + HAVL+VGY 
Sbjct: 248 AEDDIAVALANIGPVSIGIHSTKSFATYKKGIYQGKLCSKN-----PRKINHAVLIVGYD 302

Query: 346 KQ-DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +      YW+ +NSWG      G+F I RG+NACG+   A Y  +
Sbjct: 303 QTASGEKYWIGKNSWGTNWGMNGYFWIRRGHNACGLATCASYPVV 347


>gi|198457180|ref|XP_001360577.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
 gi|198135890|gb|EAL25152.2| GA18475 [Drosophila pseudoobscura pseudoobscura]
          Length = 372

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 154/337 (45%), Gaps = 55/337 (16%)

Query: 65  LETFKAFIVKRGRQY--ANDEEIKERFEYFKQD----GHKKHERYGTS------EFSDRS 112
           ++ F  F+ + G+ Y  A D+ + E     +++    G+    +  +S       FSD +
Sbjct: 61  VQNFGDFLAQSGKNYLSAADKALHEGVFAARKNLVDAGNDAFAKGASSYQLAVNAFSDLT 120

Query: 113 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
             E L + TG + S +   +  A+R+     L  V     +P+++DWR+K        Q 
Sbjct: 121 KSEFLSQLTGLRKSSQGASKATANRK-----LASVPAGASIPESFDWRQKGGVTSVKFQG 175

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAF+  G                        +EG    KTG L   S+  LV+C 
Sbjct: 176 TCGSCWAFATTG-----------------------AIEGHIFRKTGTLPNLSEQNLVDCG 212

Query: 232 K---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGK 285
                 SGCDG F E ++ + +  Q G+     YPY +    K  C Y K+      TG 
Sbjct: 213 TLEFGLSGCDGGFQEYAMAFINEEQKGVSKADGYPYID---NKDTCKYSKNLSGAQITGF 269

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
             +       MKK++   GPL+  LN    L+   +G     +DE C+  +  H++L+VG
Sbjct: 270 ATIPPKDEALMKKVIATLGPLACSLNGLETLLQYKSGI---YSDEKCNEGEPNHSILVVG 326

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG +    YW+V+NSW  +  +EG+F++ RGNN CGI
Sbjct: 327 YGSEKGQDYWIVKNSWDKVWGEEGYFRLPRGNNFCGI 363


>gi|155970232|gb|ABU41785.1| cysteine protease [Rosa x borboniana]
          Length = 357

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 149/344 (43%), Gaps = 61/344 (17%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 116
           + +F  F  +  ++Y + EE+  RFE F ++       ++K   Y  G + F+D      
Sbjct: 55  VRSFARFAYRYEKRYESVEEMGRRFEIFAENKKLIRSTNRKGLSYKLGVNRFAD------ 108

Query: 117 LCKTGFKWSERTYERIVADRE-KVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGS 175
                + W E    R+ A +             D   P   +WR + +  P  DQ  CGS
Sbjct: 109 -----WTWEEFQRHRLGAAQNCSATTKGNHKLTDAVPPLTKNWRDEGIVTPVKDQGHCGS 163

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CW FS  G                        LE  Y    GK +  S+ QLV+CA   +
Sbjct: 164 CWTFSTTG-----------------------ALEAAYVQAFGKQISPSEQQLVDCAGAFN 200

Query: 236 --GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFN 291
             GC G     + EY  +  GL++E+ YPY   +G    C +    V +       +  N
Sbjct: 201 NFGCSGGLPSQAFEYIKYNGGLDTEQAYPYTAVDG---ACKFSSENVGVRVLDSVNITLN 257

Query: 292 GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETC--SPYDLGHAVLLVGYG 345
             E +K  +    P+SV     ++ D+    + K+     ETC  +P D+ HAVL VGYG
Sbjct: 258 DEEELKHAVAFVRPVSVAF--QVVQDFR---LYKSGVYTSETCGNTPMDVNHAVLAVGYG 312

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            ++ +PYWL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 313 VENGVPYWLIKNSWGQSWGDNGYFKMEYGKNMCGVATCASYPVV 356


>gi|82659048|gb|ABB88697.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+    L   S+ QLV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHGLTALSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +++G   +C+     V       ++    S
Sbjct: 188 CGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 155/345 (44%), Gaps = 52/345 (15%)

Query: 64  ILET-FKAFIVKRGRQYANDEEIKERFEYFKQDG---HKKHERY---------GTSEFSD 110
           IL T ++AF     + Y ++ E   RF+ F ++     + +E+Y         G ++F D
Sbjct: 22  ILRTQWEAFKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGD 81

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
             P E           RT     A R         V     +P + DWR+K    P  +Q
Sbjct: 82  LLPHEFARMFNGYRGART-----AGRGSTFLPPANVNYS-SLPQSMDWREKGAVTPVKNQ 135

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        LEGQ+ +KTG LV  S+  LV+C
Sbjct: 136 GQCGSCWAFSTTGS-----------------------LEGQHFLKTGVLVSLSEQNLVDC 172

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           ++     GC+G   + + +Y     G+++EK YPY+  +GE   C + K  V   T   F
Sbjct: 173 SETFGNHGCEGGLMDNAFQYIKANGGIDTEKSYPYEAEDGE---CRFKKQNVGA-TDTGF 228

Query: 288 LHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           +    GSE  +KK +   GP+SV +++        +    ++  CS   L H VL+VGYG
Sbjct: 229 VDIEQGSEDDLKKAVATVGPVSVAIDASHSSFQLYSEGVYDETECSSEQLDHGVLVVGYG 288

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            +D   YWLV+NSW     D G+ K+ R  +N CGI   A Y  +
Sbjct: 289 VEDGKKYWLVKNSWAESWGDNGYIKMSRDKDNQCGIASAASYPLV 333


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 136/303 (44%), Gaps = 58/303 (19%)

Query: 102 RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           R G + F+D +P+E     G         R  A+  +V K+     +   VPD  DWR +
Sbjct: 71  RLGLNGFADMTPDEFEKYRG--------TRFEANEARVSKLQHRDNRSMHVPDTVDWRTE 122

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +Q  CGSCWAFS                         G LEGQ+  ++G LV 
Sbjct: 123 GYVTPVKNQGVCGSCWAFSTT-----------------------GALEGQHFRRSGDLVS 159

Query: 222 FSKSQLVECAK--QCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 278
            S+  LV+C+     +GC+G   + +  +   A GLE+EK YPY   +G    C +D   
Sbjct: 160 LSEQMLVDCSAVYGNAGCNGGLMDNAFRFIKDAGGLETEKSYPYTGKDG---TCHFDARG 216

Query: 279 VKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNS---------DLIHDYNGTPIRKNDE 328
           +    TG   +     E +K+     GP+SV +++         D ++D         + 
Sbjct: 217 IGAKLTGFVDVPSRDEEALKEAAGVVGPVSVAIDASGQNFQFYKDGVYD---------EI 267

Query: 329 TCSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 386
           TCS   L H VL+VGYG  +D   YWLV+NSWG      G+ ++ R   N CGI  +A Y
Sbjct: 268 TCSSTSLDHGVLVVGYGTTRDGKDYWLVKNSWGSSWGQSGYIQMSRNKENQCGIATMASY 327

Query: 387 ATI 389
            T+
Sbjct: 328 PTV 330


>gi|332326593|gb|AEE42620.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G+  +C      V       ++    S
Sbjct: 188 CGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIGVDASSFMSYESGVL----TSCAGBXLNHGVLLVGYNXTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVAMGVNAC 329


>gi|157864847|ref|XP_001681132.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124426|emb|CAJ02282.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY + NG+  +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|33333694|gb|AAQ11965.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 57/346 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEEYGNNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI+    Y  +
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIDYYNTYPIL 325


>gi|344295866|ref|XP_003419631.1| PREDICTED: cathepsin W-like [Loxodonta africana]
          Length = 376

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 156/357 (43%), Gaps = 64/357 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           E F  F ++  R Y+N  E   R + F ++  +  +         ++G + FSD + EE 
Sbjct: 40  EVFALFQLQYNRSYSNPAEHARRLDIFARNLAQAQQLQEEDLGTAKFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G        ++       V +     E   PVP   DWRK  NV  P  +Q  C  
Sbjct: 100 RQVYG-------QQKAPGRAPNVSRKAGPKEWGRPVPATCDWRKMANVIKPVRNQKNCKC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA ++AG                        +E  + IK  + VE S  +L++C +   
Sbjct: 153 CWAMAVAGN-----------------------IEALWGIKYSQSVEVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  I   + +GL SEKDYP++  N +  KC   K     +  +DF+     E
Sbjct: 190 GCGGGFVWDAFITVLNNSGLASEKDYPFQ-GNVKAHKCQAKKHTNVAWI-QDFIMLQDDE 247

Query: 295 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------- 346
             +   L   GP++V +N  L+  Y    IR     C P+ + H+VLLVG+GK       
Sbjct: 248 QIIAGYLATQGPITVTINMKLLQHYQKGVIRAKSNDCDPHRVNHSVLLVGFGKGKSVARM 307

Query: 347 -------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
                          +IPYW+++NSWG    +EG+F++ RG+N CGI +    A +D
Sbjct: 308 PAETPQGGAPAHPSRSIPYWILKNSWGSNWGEEGYFRLHRGSNTCGITKYPLTARVD 364


>gi|108755401|emb|CAI77919.1| cathepsin H [Guillardia theta]
 gi|122890320|emb|CAJ73711.1| Cathepsin H [Guillardia theta]
          Length = 353

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 160/361 (44%), Gaps = 82/361 (22%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYF---KQDGHKKHERYGTS------EFSDRSPEE 115
           L  F+ +  K  + Y +D     R   F    ++    + R GT+      ++SD     
Sbjct: 30  LREFERWTKKHSKVYEDDTTYLRRLASFCVSLKEVEAINSRPGTTWRAALNQYSD----- 84

Query: 116 ILCKTGFKWSERTYERIVADREKVEKMLMEVEK---DGPVPDAWDWRKK-----NVTGPA 167
                   W E  + +++A++     +   VEK    G V D +DWR +     +     
Sbjct: 85  ------LTWEEFKHAKLMAEQNCGATVTTPVEKLVKMGIVADEFDWRNQTCGETSCVSMV 138

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q  CGSCW FS A                         LE  +AIKTG++V  S+ QL
Sbjct: 139 KNQGTCGSCWTFSTAAA-----------------------LESLHAIKTGEMVLLSEQQL 175

Query: 228 VECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE----KFKCAYDK---- 276
           V+CA   + +GC+G     + EY  +  GL   ++YPY   +G        CA+D     
Sbjct: 176 VDCAADFKNNGCNGGLPSQAFEYIMYNGGLSKMEEYPYVCGDGHCNVTGGPCAFDPVGKP 235

Query: 277 -------SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKND 327
                  SKV  FT  D +      +MK ++  + P+SV     +DL H  +G     + 
Sbjct: 236 WSVGAKVSKVANFTPGDEI------SMKTVVGSHNPISVAFEVVADLRHYSSGV---YSS 286

Query: 328 ETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 385
            TC  +P  + HAVL VGYG +  IPYW ++NSWG    D G+FKI+RG+N CGI   A 
Sbjct: 287 PTCVGTPDKVNHAVLAVGYGTEGGIPYWTIKNSWGFAWGDNGYFKIQRGSNKCGISVCAS 346

Query: 386 Y 386
           +
Sbjct: 347 F 347


>gi|71084302|gb|AAZ23596.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS+ G                        +E Q+A+   +L   S+ QLV C    SG
Sbjct: 151 WAFSVVGN-----------------------IESQWAVAGHRLTALSEQQLVSCDDMDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +  G   +C      V       ++    +
Sbjct: 188 CGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSTFGYVPECTNSSQLVPGARIDGYVMIESN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y+G  +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIGVDASSFMSYHGGVL----TSCAGKQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGEKGYVRVTMGVNAC 329


>gi|33333704|gb|AAQ11970.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 57/346 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAIDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI     Y  +
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGIGTYNTYPVL 325


>gi|341886805|gb|EGT42740.1| hypothetical protein CAEBREN_23878 [Caenorhabditis brenneri]
          Length = 396

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 154/333 (46%), Gaps = 46/333 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 115
           + + FK F  K GR++ + EE K RFE F+++  +  E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNKKFGREHKSLEEYKMRFEVFQKNLREFEELNQKNPSVQYGINKFSDKTESE 143

Query: 116 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAF+                           +E QYAI+ G L   S+ +LV+
Sbjct: 199 QGQCGSCWAFATVA-----------------------AVESQYAIRKGTLWSLSEQELVD 235

Query: 230 CAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
           C     GC G F   ++ +    GLE+E DYPY     ++  C  +  K +++  + +  
Sbjct: 236 CDGASYGCGGGFLTSALGFILGNGLETEDDYPYSATKHDQ--CWINGDKTRVWIDEGYQL 293

Query: 290 FNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQ 347
               + + + +   GP+S  ++       Y+      ++  C    LG HA+ ++GYG++
Sbjct: 294 TMSEDDVAEWVANVGPVSFAMSVPKSFPAYHDGIYSPSEHECKDESLGYHAMAIIGYGQE 353

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
               YW+V+NSWG    D+G+ ++ RG NACG+
Sbjct: 354 GGQNYWIVKNSWGGSWGDQGYMRLARGVNACGM 386


>gi|403302734|ref|XP_003942008.1| PREDICTED: cathepsin K isoform 1 [Saimiri boliviensis boliviensis]
          Length = 329

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 136/288 (47%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSFSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|387765908|gb|AFJ95133.1| cathepsin-L [Toxocara canis]
          Length = 360

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 50/358 (13%)

Query: 44  VVARVDTLAIEGSLTFDNE-NILETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKK 99
           VVA+  ++  E       E  +L+ F+ FI K  + Y ++EE  ERF  +  +     K 
Sbjct: 25  VVAKNQSVKFEKEYDLTRELRLLDRFEDFIRKYDKVYDSNEEFAERFRIYVNNMLEAQKL 84

Query: 100 HER-------YGTSEFSDRSPEE----ILCKTGFKWSERTYERIVADREKVEKMLMEVEK 148
           ++R       YG +EF+D +  E    +L K  FK   +    I +  +  E ++   E+
Sbjct: 85  NQRNRDYGTIYGENEFADWNVNEFREILLPKDFFKNLRKKATFIDSFIDPPETVMARREE 144

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
              +PD +DWR  NV  P   Q  CGSC AF+  G                        +
Sbjct: 145 ---IPDHFDWRPYNVVTPVKSQFKCGSCRAFATGG-----------------------TV 178

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE 268
           E  YA+ TG+L   S+ QL++C  + + CDG   + ++ Y +  GL  E DYPY     +
Sbjct: 179 ESAYALGTGELRSLSEHQLLDCNLENNACDGGDVDKALRYVYDEGLMREYDYPYVAHRQD 238

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKND 327
             +   + +++K      FLH + +  +  +L+ YGP++V +N    +  Y G     + 
Sbjct: 239 TCQLRGETTRIKAAV---FLHQDEASIIDWLLH-YGPVNVGINVTADMKAYKGGVYTPDR 294

Query: 328 ETCSPYDLG-HAVLLVGYGKQD--NIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 381
             C    +G H++ +VGYG  +  N  YW+V+NSWG   G ++G+    RG N+CGIE
Sbjct: 295 WECENKIIGTHSINIVGYGTWNATNQKYWIVKNSWGQSYGIEDGYVYFARGINSCGIE 352


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 118/244 (48%), Gaps = 33/244 (13%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD  DWR +    P  DQ  CGSCWAFS  G                        LEGQ
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGS-----------------------LEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           +  KTGKLV  S+  LV+C  A   +GCDG   + +  Y  +  G++SE  YPY   +G 
Sbjct: 145 HFKKTGKLVSLSEQNLVDCSTAYGNNGCDGGLMDNAFTYIKENKGIDSEASYPYTAEDG- 203

Query: 269 KFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
             KC + KS V   T   F+    G+E  +K+ +   GP+SV +++        +    N
Sbjct: 204 --KCVFKKSSVAA-TDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYN 260

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 385
           + +CS  +L H VL+VGYG +    YWLV+NSW     D+G+ K+ R   N CGI   A 
Sbjct: 261 EPSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKAS 320

Query: 386 YATI 389
           Y  +
Sbjct: 321 YPLV 324


>gi|115457680|ref|NP_001052440.1| Os04g0311400 [Oryza sativa Japonica Group]
 gi|113564011|dbj|BAF14354.1| Os04g0311400, partial [Oryza sativa Japonica Group]
          Length = 384

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 59/262 (22%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD +DWR+    GP  DQ +CGSCW+FS +                       G LEG 
Sbjct: 148 LPDDFDWREHGAVGPVKDQGSCGSCWSFSTS-----------------------GALEGA 184

Query: 212 YAIKTGKLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYP 261
           + + TGKL   S+ Q+V+C  +C         SGC+G     +  Y  ++ GL+SEKDYP
Sbjct: 185 HFLATGKLEVLSEQQMVDCDHECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYP 244

Query: 262 YKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNG 320
           Y    G +  C +DKSK+ +   K+F   + +E  +   L K+GPL++ +N+  +  Y G
Sbjct: 245 YA---GRENTCKFDKSKI-VAQVKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIG 300

Query: 321 TPIRKNDETCSPY----DLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFF 369
                      P+     L H VLLVGYG            PYW+++NSWG    ++G++
Sbjct: 301 G-------VSCPFICGRHLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGENWGEKGYY 353

Query: 370 KIERG---NNACGIEQIAGYAT 388
           KI RG    N CG++ +    T
Sbjct: 354 KICRGPHDKNKCGVDSMVSSVT 375


>gi|2677828|gb|AAB97142.1| cysteine protease [Prunus armeniaca]
          Length = 358

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 172/401 (42%), Gaps = 60/401 (14%)

Query: 5   IQRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENI 64
           + R+ L   A +++ A+   CG A+     S   R+    +  ++   ++      N   
Sbjct: 1   MARVTLVLSAALVLVAI--SCGAAASSFDESNPIRLVSDGLRELEQQVVQ---VLGNSRR 55

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEI 116
              F  F  + G++Y + EE+K R+E F ++       +KK   Y    + F+D S    
Sbjct: 56  ALHFARFAHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTLAVNRFADWS---- 111

Query: 117 LCKTGFKWSERTYERIVADR--EKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
                  W E   +R+ A +      K   E+  D  +P++ +WR++ +  P  DQ  CG
Sbjct: 112 -------WEEFRRQRLGAAQNCSATTKGSHEL-TDAVLPESKNWREEGIVTPVKDQGHCG 163

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW FS  G                        LE  Y     K +  S+ QLV+CA   
Sbjct: 164 SCWTFSTTGA-----------------------LEAAYVQAFRKQISLSEQQLVDCAGAF 200

Query: 235 S--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHF 290
           +  GC G     + EY  +  GL++E  YPY   +G    C +    V +       +  
Sbjct: 201 NNFGCHGGLPSQAFEYIKYNGGLDTEAAYPYVGTDG---ACKFSAENVGVQVLDSVNITL 257

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQD 348
              + +K  +    P+SV            + +  +D TC  SP D+ HAVL VGYG++ 
Sbjct: 258 GDEQELKHAVAFVRPVSVAFQVVKSFRIYKSGVYTSD-TCGSSPMDVNHAVLAVGYGEEG 316

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            +P+WL++NSWG    D G+FK+E G N CG+   A Y  +
Sbjct: 317 GVPFWLIKNSWGESWGDNGYFKMEFGKNMCGVATCASYPIV 357


>gi|344275468|ref|XP_003409534.1| PREDICTED: cathepsin K-like [Loxodonta africana]
          Length = 329

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSDSRNNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPVGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|308476152|ref|XP_003100293.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
 gi|308265817|gb|EFP09770.1| hypothetical protein CRE_21852 [Caenorhabditis remanei]
          Length = 391

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 177/378 (46%), Gaps = 61/378 (16%)

Query: 26  GVASCLCLPSLTDRITDQVVARVDTL-AIEGSLTFDN----ENILETFKAFIVKRGRQYA 80
           G  +C C  ++   ++  V+A + TL  +     FD+    +   + F  FI+K  R+Y 
Sbjct: 42  GYKTCACDYAVIQMLSLVVLAVMLTLLGLFVYQLFDSKLEKQRYEQMFNDFILKYDRRYP 101

Query: 81  NDEEIKERFEYFKQDGHK----KHERYG----TSEFSDRSPEEILCKTGFKWSERTYERI 132
           + EE + R++ F Q+  +    + + +G     +EF+D + EE+             +RI
Sbjct: 102 SLEEFQYRYQVFLQNVKEFEAEEAKHFGLDLDVNEFTDWTNEEL-------------QRI 148

Query: 133 VADREKV-----EKMLME---VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGK 184
           V D + V     E++  E   +E     P + DWR +    P  +Q  CGSCWAF+    
Sbjct: 149 VYDNKNVKTDGSEEVRFEGSYLESGVKRPASIDWRDQGKLTPIKNQGQCGSCWAFATVAA 208

Query: 185 FSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEP 244
                                  +E Q+AI+  +LV  S+ ++V+C  + +GC G +   
Sbjct: 209 -----------------------VEAQHAIRKNQLVSLSEQEMVDCDDKNNGCSGGYRPY 245

Query: 245 SIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 304
           ++ +  + GLESEK+YPY     ++  C   ++  ++F     +     E +   +   G
Sbjct: 246 AMRFVKENGLESEKEYPYSALKHDQ--CMLKQNDTRVFIDDFRMLSQNEEEIANWVGTKG 303

Query: 305 PLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPYWLVRNSWGPI 362
           P++  ++ +  ++ Y       + + C+   +G HA+ +VGYG +    +W+V+NSWG  
Sbjct: 304 PVTFGMSVTKAMYSYRSGIFNPSADDCAEKSMGSHALTIVGYGGEGEAAFWIVKNSWGTS 363

Query: 363 GPDEGFFKIERGNNACGI 380
               G+F++ RG N+CG+
Sbjct: 364 WGASGYFRLARGVNSCGL 381


>gi|260830531|ref|XP_002610214.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
 gi|229295578|gb|EEN66224.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
          Length = 274

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 129/295 (43%), Gaps = 48/295 (16%)

Query: 94  QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVP 153
           QD  +   +YG ++F D + EE           R Y      +   + +          P
Sbjct: 16  QDSERGTAKYGVTKFMDLTEEEF----------RRYYLTPVWKAPAKPLPPATIPKKDAP 65

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
            A+DWR         DQ  CGSCWAFS  G                        +EGQ+A
Sbjct: 66  TAFDWRDHGAVTEVKDQGQCGSCWAFSTTGN-----------------------IEGQWA 102

Query: 214 IKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-----GLESEKDYPYKNANGE 268
           IK G L + S+       +  S  + C   P ++ T ++     GLESEK YPY+  + +
Sbjct: 103 IKKGNLPDLSE-------QHTSKIESCHINPIVKRTKRSIDGKSGLESEKAYPYEAKDEQ 155

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
              C  D SKV+++             M   L + GP+S+ +N+  +  Y G        
Sbjct: 156 ---CHMDYSKVQVYINSSVNISKDENDMASWLAENGPISIGINAFPMQFYMGGISHPWRI 212

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            C+P +L H VL+VGYG +D  PYW+++NSWG    +EG++ + RG   CG+  +
Sbjct: 213 FCNPEELDHGVLIVGYGTKDETPYWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTM 267


>gi|226476104|emb|CAX72142.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 158/342 (46%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKVIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + R+ ++         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPRVFSNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       N+  C   D+ H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|3023456|sp|Q26534.1|CATL_SCHMA RecName: Full=Cathepsin L; AltName: Full=SMCL1; Flags: Precursor
 gi|555663|gb|AAC46485.1| preprocathepsin L [Schistosoma mansoni]
 gi|1094710|prf||2106314A cathepsin L
          Length = 319

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 146/340 (42%), Gaps = 49/340 (14%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKH---------ERYGTSEFSDRSP 113
           N+ E +  F +K  +QY   E+ + RF  FK +  K             YG + +SD + 
Sbjct: 15  NVDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTT 73

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           +E      F  +  T   +V          +  E +  +P  +DWR+K       +Q  C
Sbjct: 74  DE------FARTHLTASWVVPSSRSNTPTSLGKEVNN-IPKNFDWREKGAVTEVKNQGMC 126

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +E Q+  KTGKL+  S+ QLV+C   
Sbjct: 127 GSCWAFSTTGN-----------------------VESQWFRKTGKLLSLSEQQLVDCDGL 163

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             GC+G    PS  Y       GL  E +YPY   N    KC      V ++        
Sbjct: 164 DDGCNGGL--PSNAYESIIKMGGLMLEDNYPYDAKNE---KCHLKTDGVAVYINSSVNLT 218

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-KQDN 349
                +   LY    +SV +N+ L+  Y           CS Y L HAVLLVGYG  + N
Sbjct: 219 QDETELAAWLYHNSTISVGMNALLLQFYQHGISHPWWIFCSKYLLDHAVLLVGYGVSEKN 278

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            P+W+V+NSWG    + G+F++ RG+ +CGI  +A  A I
Sbjct: 279 EPFWIVKNSWGVEWGENGYFRMYRGDGSCGINTVATSAMI 318


>gi|348586441|ref|XP_003478977.1| PREDICTED: cathepsin K-like [Cavia porcellus]
          Length = 329

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +          L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHSHSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQENRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  DL HA+L V
Sbjct: 222 RGYREIPVGNEKALKRAVARVGPVSVAIDASLSSFQFYSKGVYYDESCNGEDLNHALLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGMQRGNKHWILKNSWGENWGNKGYVLLARNKNNACGIANLASFPKM 329


>gi|228861649|ref|YP_002854669.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
 gi|226425097|gb|ACO53509.1| cathepsin [Euproctis pseudoconspersa nucleopolyhedrovirus]
          Length = 334

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 154/335 (45%), Gaps = 46/335 (13%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSE 107
           S T+D     + F+ F+    + Y +  E  +R+  FK +  + + +        Y  ++
Sbjct: 25  SDTYDPLKAADYFELFVANYNKNYTDPLEKTKRYHIFKDNLEEINNKNKSNDTAVYRINK 84

Query: 108 FSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           FSD S  E++ K TG          +  +     K+++  +  G  P  +DWR++N   P
Sbjct: 85  FSDLSTNELISKYTGLN--------VPGETANFCKIVVLDQPPGKGPLNFDWRQQNKVTP 136

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             +Q ACG+CWAF+                           +E QYAI+    ++ S+ Q
Sbjct: 137 IKNQGACGACWAFATLAS-----------------------IESQYAIRNNVHLDLSEQQ 173

Query: 227 LVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGK 285
           +++C     GC G     + E   Q  G+E E+ YPY+  N      + ++  VK+    
Sbjct: 174 MIDCDYVDMGCYGGLLHTAFEQMIQMGGVEEERQYPYEGVNNNCRLKSDERFVVKVKGCY 233

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
            +L     E +K +L   GPL + +++  I +Y     R     C    L HAVLLVGYG
Sbjct: 234 RYLVMR-EEKLKDLLRAVGPLPMAIDASSIFNY----YRGVINYCGNNGLNHAVLLVGYG 288

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            ++ +P+W  +N+WG    ++G+F++ +  +ACG+
Sbjct: 289 VENGVPFWTFKNTWGDDWGEDGYFRVRQNVDACGM 323


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 155/329 (47%), Gaps = 43/329 (13%)

Query: 75  RGRQYANDEEIKERFEYFKQDG------HKKHERY--GTSEFSDRSPEEILCKTGFKWSE 126
           R  +  + +E   RFE FK++       +KK   Y  G ++F+D S EE          E
Sbjct: 53  RSTRSLDSDEHARRFEIFKENVKHIDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKME 112

Query: 127 RTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
           + ++ +  DR  VE      +    +P + DWRKK    P  +Q  CGSCWAFS      
Sbjct: 113 K-HKSLRGDR-GVESGSFMYQNSKRLPASIDWRKKGAVTPVKNQGQCGSCWAFSTIAS-- 168

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 246
                                +EG   IKTGKLV  S+ QLV+C+K+ +GC+G   + + 
Sbjct: 169 ---------------------VEGINYIKTGKLVSLSEQQLVDCSKENAGCNGGLMDNAF 207

Query: 247 EY-THQAGLESEKDYPYKNANGEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYG 304
           +Y     G+ +E +YPY    GE      + KS   +  G + +  N    +KK +  + 
Sbjct: 208 QYIIDNGGIVTEDEYPYTAEAGECSTTKIESKSIATIIDGFEDVPANNEGALKKAV-AHQ 266

Query: 305 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIG 363
           P+S+ + +   HD+           C   +L H V++VGYGK  + I YW+VRNSWGP  
Sbjct: 267 PVSIAIEASG-HDFQFYSTGVFTGKCGT-ELDHGVVVVGYGKSPEGINYWIVRNSWGPEW 324

Query: 364 PDEGFFKIERGNNA----CGIEQIAGYAT 388
            ++G+ +++RG  A    CGI   A Y T
Sbjct: 325 GEQGYIRMQRGIEATEGKCGISMQASYPT 353


>gi|355681653|gb|AER96814.1| cathepsin K [Mustela putorius furo]
          Length = 329

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 154/348 (44%), Gaps = 51/348 (14%)

Query: 56  SLTFDNENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS------- 106
           S+    E IL+T ++ +    G+QY N  +EI  R  + K   H        S       
Sbjct: 14  SIALYPEEILDTQWELWKKTYGKQYNNKVDEISRRLIWEKNLKHISIHNLEASLGVHTYE 73

Query: 107 ----EFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
                  D + EE++ K TG K        +     +    L   + +   PD+ D+RKK
Sbjct: 74  LAMNHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDSLYIPDWESRAPDSIDYRKK 125

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+ 
Sbjct: 126 GYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLN 162

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KV 279
            S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K 
Sbjct: 163 LSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKA 219

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
               G   +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAV
Sbjct: 220 AKCKGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAV 279

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
           L VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +
Sbjct: 280 LAVGYGVQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASF 327


>gi|401430350|ref|XP_003886559.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491516|emb|CBZ40966.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 503

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E    
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEF--- 154

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
              ++         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 155 -AARYLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 213

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 214 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 250

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 251 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 309

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 310 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 365

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 366 IKNSWGGDWGEQGYVRVVMGVNAC 389


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 158/346 (45%), Gaps = 50/346 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 111
           + E + +F ++  + Y ++ E + R + F ++ HK  KH +           G ++++D 
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADM 82

Query: 112 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF    +T   I+   +  + +      +  +PD  DWR K       DQ
Sbjct: 83  LHHEFVSTLNGFN---KTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQ 139

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        LEGQ+  KTGKLV  S+  LV+C
Sbjct: 140 GHCGSCWSFSATGS-----------------------LEGQHFRKTGKLVSLSEQNLVDC 176

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           + +   +GC+G   + +  Y     G+++EK YPY     E  KC Y K++    T K F
Sbjct: 177 SGRYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYL---AEDEKCHY-KAQNSGATDKGF 232

Query: 288 LHFN--GSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           +       + +K  +   GP+S+ +++        +    +D  CS  +L H VL+VGYG
Sbjct: 233 VDIEEANEDDLKAAVATVGPVSIAIDASHETFQLYSDGVYSDPECSSQELDHGVLVVGYG 292

Query: 346 KQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             D+   YWLV+NSWGP     G+ K+ R  +N CG+   A Y  +
Sbjct: 293 TSDDGQDYWLVKNSWGPSWGLNGYIKMARNQDNMCGVASQASYPLV 338


>gi|401430387|ref|XP_003886572.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491640|emb|CBZ40951.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 332

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GC G
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCSG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|47523662|ref|NP_999467.1| cathepsin K precursor [Sus scrofa]
 gi|15213940|sp|Q9GLE3.1|CATK_PIG RecName: Full=Cathepsin K; Flags: Precursor
 gi|10048286|gb|AAG12340.1|AF292030_1 cathepsin K precursor [Sus scrofa]
          Length = 330

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYV 128

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 129 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 165

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 166 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDENCMYNPTGKAAKC 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL V
Sbjct: 223 RGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAV 282

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 GYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330


>gi|33333712|gb|AAQ11974.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|4139678|pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1
           Angstrom Resolution: Location Of The Mini-Chain
           C-Terminal Carboxyl Group Defines Cathepsin H
           Aminopeptidase Function
 gi|28948781|pdb|1NB3|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948784|pdb|1NB3|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948787|pdb|1NB3|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948790|pdb|1NB3|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H:
           N-Terminal Residues Of Inhibitors Can Adapt To The
           Active Sites Of Endo-And Exopeptidases
 gi|28948793|pdb|1NB5|A Chain A, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948796|pdb|1NB5|B Chain B, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948799|pdb|1NB5|C Chain C, Crystal Structure Of Stefin A In Complex With Cathepsin H
 gi|28948802|pdb|1NB5|D Chain D, Crystal Structure Of Stefin A In Complex With Cathepsin H
          Length = 220

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 119/246 (48%), Gaps = 44/246 (17%)

Query: 153 PDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           P + DWRKK N   P  +Q +CGSCW FS  G                        LE  
Sbjct: 2   PPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGA-----------------------LESA 38

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
            AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPYK   G+
Sbjct: 39  VAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYK---GQ 95

Query: 269 KFKCAYDKSKVKLFTGKDF--LHFNGSETMKKILYKYGPLSV---LLNSDLIHD---YNG 320
              C +   K   F  KD   +  N  E M + +  Y P+S    + N  L++    Y+ 
Sbjct: 96  DDHCKFQPDKAIAFV-KDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSS 154

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           T   K     +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG+
Sbjct: 155 TSCHK-----TPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 209

Query: 381 EQIAGY 386
              A Y
Sbjct: 210 AACASY 215


>gi|7271891|gb|AAF44676.1|AF239265_1 cathepsin L [Fasciola gigantica]
          Length = 326

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VP + DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPASIDWRESGYVTEVKDQGQCGSCWAFSTTGA-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+      GC+G   E + EY  + GLE+E  YPY+   G  
Sbjct: 145 YMKNQRTSISFSEQQLVDCSDDFGNFGCNGGLMENACEYLKRFGLETESSYPYRAVEG-- 202

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      ++ ++   GP +V L+  SD +   +G      
Sbjct: 203 -PCRYNKQLGVAKVTGYYMVHSGDEVELQNLVGIEGPAAVALDVDSDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L H VL VGYG Q    YW+V+NSWGP   + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPEFLNHGVLAVGYGTQSGTDYWIVKNSWGPWWGENGYIRMVRNRGNMCGIASLA 317


>gi|222641669|gb|EEE69801.1| hypothetical protein OsJ_29533 [Oryza sativa Japonica Group]
          Length = 314

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 112/244 (45%), Gaps = 33/244 (13%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P+  DWR+  +  P  DQ  CGSCW FS  G                        LE  
Sbjct: 97  LPETKDWREDGIVSPVKDQGHCGSCWTFSTTGS-----------------------LEAA 133

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
           Y   TGK V  S+ QLV+CA   +  GC G     + EY  +  GL++E+ YPY   NG 
Sbjct: 134 YTQATGKPVSLSEQQLVDCATAYNNFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNG- 192

Query: 269 KFKCAY--DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRK 325
              C Y  +   VK+    + +     + +K  +    P+SV     +    Y       
Sbjct: 193 --ICHYKPENVGVKVLDSVN-ITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTS 249

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAG 385
           +    SP D+ HAVL VGYG ++ +PYWL++NSWG    D G+FK+E G N CGI   A 
Sbjct: 250 DHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCAS 309

Query: 386 YATI 389
           Y  +
Sbjct: 310 YPIV 313


>gi|33333706|gb|AAQ11971.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 158/337 (46%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|348546019|ref|XP_003460476.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
 gi|348546143|ref|XP_003460538.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 117/243 (48%), Gaps = 31/243 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PDA DWR K       DQ  CGSCWAFS  G                        LEGQ
Sbjct: 118 LPDAVDWRDKGYVTDVKDQKQCGSCWAFSATGS-----------------------LEGQ 154

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGE 268
           +  KTG LV  S+ QLV+C+      GC G   + + +Y     G+++E+ YPY+  NG 
Sbjct: 155 HFRKTGTLVSLSEQQLVDCSGDYGNMGCMGGLMDYAFQYIQANGGIDTEESYPYEAENG- 213

Query: 269 KFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
             KC Y+   +    TG   +     + +K+ +   GP+SV +++  +          N+
Sbjct: 214 --KCRYNPDNIGATSTGYTEVSQGDEDALKEAVATIGPISVGIDASQMSFQFYESGVYNE 271

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
             CS  +L H VL VGYG +D   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y
Sbjct: 272 PDCSSLELDHGVLAVGYGTEDGNDYWLVKNSWGLEWGDKGYIKMSRNKSNQCGIATAASY 331

Query: 387 ATI 389
             +
Sbjct: 332 PLV 334


>gi|225458119|ref|XP_002279862.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
 gi|302142581|emb|CBI19784.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 70/350 (20%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHER------YGTSEFSDRSPE 114
           N    F+ F  +  + YA  EE   RF  FK +    K+H+       +G ++FSD +P 
Sbjct: 47  NAERHFEKFKARFQKTYATPEEHDYRFNVFKANLRRAKRHQLLDPSAVHGVTQFSDLTPA 106

Query: 115 EILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           E           R Y  +   R   +     +     +P  +DWR+     P  +Q  CG
Sbjct: 107 EF---------RRDYLGLNPLRFPADAQQAPILPTDNLPTDFDWRENGAVTPVKNQGNCG 157

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCW+FS  G                        LEG + + TG L   S+ QLV+C ++C
Sbjct: 158 SCWSFSTIGA-----------------------LEGAHFLATGNLESLSEQQLVDCDREC 194

Query: 235 S---------GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                     GC+G     + EY     G+E EKDYPY     ++  C +++SK+     
Sbjct: 195 DPEEYDACDDGCNGGLMNNAFEYILKTGGVEREKDYPYTGR--DRSPCKFNESKIVASVS 252

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY----DLGHAVL 340
              +     + +   L K GPL+V +N+  +  Y             P+    +L H VL
Sbjct: 253 NFSVVSIDEDQIAANLVKNGPLAVGINAVFMQTYTAG-------VSCPFLCSGELDHGVL 305

Query: 341 LVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           LVGYG            PYW+++NSW     + G+++I RG N CG++ +
Sbjct: 306 LVGYGSAGYSPIRFKEKPYWILKNSWSKYWGEHGYYRICRGQNMCGVDSM 355


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 165/348 (47%), Gaps = 55/348 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 111
           + E + AF +   +QY ++ E + R + F ++ H   KH +           G ++++D 
Sbjct: 23  VQEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADM 82

Query: 112 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF    RT   + +  E  + +      +  +P   DWR K    P  DQ
Sbjct: 83  LHHEFVQVLNGFN---RTKSGLRSG-ESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQ 138

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        LEGQ+  ++GKLV  S+  LV+C
Sbjct: 139 GQCGSCWSFSATGS-----------------------LEGQHFRQSGKLVSLSEQNLVDC 175

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +++   +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K K K  T + +
Sbjct: 176 SEKFGNNGCNGGLMDNAFRYIKANGGIDTEQAYPYK---AEDEKCHY-KPKNKGATDRGY 231

Query: 288 LHF-NGSE-TMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           +   +G+E  ++  +   GP+SV +++       Y+G    + D  CS   L H VL+VG
Sbjct: 232 VDIESGNEDKLQSAVATVGPVSVAIDASHQSFQLYSGGVYYEPD--CSASQLDHGVLVVG 289

Query: 344 YGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG +D+   YWLV+NSWG    D+G+ K+ R  NN CGI   A Y  +
Sbjct: 290 YGTEDDGTDYWLVKNSWGKSWGDQGYIKMARNRNNNCGIATEASYPLV 337


>gi|410910990|ref|XP_003968973.1| PREDICTED: cathepsin K-like [Takifugu rubripes]
          Length = 329

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 157/364 (43%), Gaps = 58/364 (15%)

Query: 45  VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKK 99
           V + +   ++G+ +     + E +K   VK  ++Y N  E+  R   ++ +      H  
Sbjct: 5   VEKNEGFQVQGNASSALNKVWEEWK---VKHSKRYDNQTEMVHRRAAWEHNVRLVLRHNL 61

Query: 100 HERYGTSEFS-------DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 152
               G   F+       D + EE+        +E+     V +   V     E + D   
Sbjct: 62  EASAGKHGFTLELNHLADMTAEEV--------NEKMNNLKVEEWVPVRNGTFEDKLDSET 113

Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
           P + DWRK  +  P  +Q  CGSCWAFS  G                        LEGQ 
Sbjct: 114 PQSVDWRKHGLVSPVQNQGYCGSCWAFSSLG-----------------------ALEGQM 150

Query: 213 AIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEK 269
             KTG LV  S   L++C+      GC G +   S  Y     G++SE  YPY++  G  
Sbjct: 151 KRKTGFLVPLSPQNLLDCSTSDGNLGCRGGYISKSYSYIIRNGGVDSESFYPYEHQKG-- 208

Query: 270 FKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKN 326
            KC Y  K K    +    L     ET+K  + + GP++V +N+ L   H Y G     N
Sbjct: 209 -KCRYSVKGKAGYCSRFHILPQGDEETLKATVARVGPVAVAVNAMLASFHLYRGGLY--N 265

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
              C+P  + HAVL+VGYG  +   +WLV+NSWG    +EG+ ++ R   N CGI   A 
Sbjct: 266 VPNCNPKFINHAVLVVGYGSSEGQDFWLVKNSWGSAWGEEGYIRLARNKKNLCGIASFAV 325

Query: 386 YATI 389
           Y ++
Sbjct: 326 YPSL 329


>gi|281350618|gb|EFB26202.1| hypothetical protein PANDA_004780 [Ailuropoda melanoleuca]
          Length = 373

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 62/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA ++AG                        +E  + I+  + V+ S  +L++C +   
Sbjct: 153 CWAMAVAGN-----------------------VEALWGIRYNRSVQVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  +   + +GL SE+DYP++  N +  KC     K K+   +DF+    +E
Sbjct: 190 GCRGGFVWDAFLTILNNSGLASEQDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNE 247

Query: 295 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------- 346
             +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK       
Sbjct: 248 QRIAWYLATQGPITVTINMKLLQQYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGR 307

Query: 347 -----------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                      ++ IPYW+++NSWG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 308 RAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363


>gi|255585361|ref|XP_002533377.1| cysteine protease, putative [Ricinus communis]
 gi|223526784|gb|EEF29008.1| cysteine protease, putative [Ricinus communis]
          Length = 381

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 154/364 (42%), Gaps = 72/364 (19%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSD 110
           F   N  E FK F++K  ++Y   EE   R   F ++  +  E         +G + F D
Sbjct: 58  FLGTNTEENFKMFMIKYDKEYDTREEYMHRLGVFAKNLIRAAEHQVLDPTAVHGITPFMD 117

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKNVTGPAG 168
            + EE          ER Y  +V       + +      +   +P ++DWRKK       
Sbjct: 118 LTEEEF---------ERMYTGVVGGGAVGAEGVTATSFLETAGLPSSFDWRKKGAVTDVK 168

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
            Q ACGSCWAFS  G                        +EG   I TGKL+  S+ QLV
Sbjct: 169 MQGACGSCWAFSTTGA-----------------------IEGANFIATGKLLNLSEQQLV 205

Query: 229 ECAKQC---------SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSK 278
           +C + C          GC G     +  Y  +A GLE E  YPY    G+  KC +D+ K
Sbjct: 206 DCDRVCDIKEKTACDDGCGGGLMTNAYRYLIEAGGLEDEISYPY---TGKPGKCKFDEKK 262

Query: 279 VKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYD 334
           + +    +F      E  +   L  +GPL++ LN+  +  Y G    P+      C    
Sbjct: 263 IAVRV-VNFTSIPIDENQIAAHLVHHGPLAIGLNAVFMQTYIGGVSCPL-----ICGKKW 316

Query: 335 LGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYA 387
           + H VLLVGYG +          PYW+++NSWG    +EG+++I +G   CG++++    
Sbjct: 317 INHGVLLVGYGAKGFSILRLGYKPYWIIKNSWGKRWGEEGYYRICKGYGMCGMDRMVSAV 376

Query: 388 TIDV 391
              V
Sbjct: 377 VTQV 380


>gi|339896953|ref|XP_003392238.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|14349351|gb|AAC38832.2| cysteine protease [Leishmania chagasi]
 gi|17384031|emb|CAD12393.1| cysteine proteinase [Leishmania infantum]
 gi|321398984|emb|CBZ08377.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 443

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 143/326 (43%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A     LV  S+ QLV C  + +G
Sbjct: 151 WAFSAVGN-----------------------IESQWARAGHGLVSLSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY--THQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E+   H  G+  +EK YPY + NG+  +C      V       ++    +
Sbjct: 188 CNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PY
Sbjct: 248 ETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVVMGLNAC 329


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 161/360 (44%), Gaps = 55/360 (15%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS- 106
           L +  +     E +   + AF    G+ YA+D E   R + + ++  K    +E+Y  S 
Sbjct: 10  LFVTAAAITHQELVGAEWSAFKALHGKDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQ 69

Query: 107 --------EFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDA 155
                   EF D    E +  + GFK   R Y     D  +     +E E  +D  +P  
Sbjct: 70  VSYKLAMNEFGDLLHHEFVSTRNGFK---RNYR----DSPREGSFFVEPEGFEDLQLPKT 122

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWRKK    P  +Q  CGSCWAFS  G                        LEG +  K
Sbjct: 123 VDWRKKGAVTPVKNQGQCGSCWAFSTTGS-----------------------LEGPHFRK 159

Query: 216 TGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKC 272
           T KLV  S+  LV+C++    +GC+G   + + +Y     G+++E  YPY   +G    C
Sbjct: 160 TRKLVSLSEQNLVDCSRSFGNNGCEGGLMDNAFKYIKSNKGIDTEWSYPYNATDG---VC 216

Query: 273 AYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            +++S V   T   F+    G E  +KK +   GP+SV +++        +    ++  C
Sbjct: 217 HFNRSDVGA-TDTGFVDIPEGDENKLKKAVAAVGPVSVAIDASHESFQFYSEGVYDEPEC 275

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           S   L H VL+VGYG +D   YWLV+NSWG    DEG+  + R  +N CGI   A Y  +
Sbjct: 276 SSEQLDHGVLVVGYGTKDGQDYWLVKNSWGTTWGDEGYIYMTRNKDNQCGIASSASYPLV 335


>gi|33333698|gb|AAQ11967.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSVVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEEYGNNGCRGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGDYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DEKCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|358345461|ref|XP_003636796.1| Cysteine proteinase [Medicago truncatula]
 gi|355502731|gb|AES83934.1| Cysteine proteinase [Medicago truncatula]
          Length = 475

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 148/345 (42%), Gaps = 67/345 (19%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSD 110
           E ++E F+ +  +  + Y + EE   R E FK++     ER            G + F+D
Sbjct: 45  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 104

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            S EE      FK                 K + +VE     P + DWRKK V     DQ
Sbjct: 105 MSNEE------FK----------------NKFISKVESCDDAPYSLDWRKKGVVTGVKDQ 142

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        +EG  AI TG L+  S+ +LV+C
Sbjct: 143 GNCGSCWSFSSTGA-----------------------IEGVNAIVTGDLISLSEQELVDC 179

Query: 231 AKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
                GC+G + + + E+  +  G+++E DYPY    G    C   K + K+ T   +  
Sbjct: 180 DTTNDGCEGGYMDYAFEWVINNGGIDTEADYPYIGVGG---TCNVTKEETKVVTIDGYTD 236

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
              S++         P+SV ++   +    Y G  I   D + +P D+ HAVL+VGYG  
Sbjct: 237 VTQSDSALFCATVKQPISVGIDGSTLDFQLYTG-GIYDGDCSSNPDDIDHAVLIVGYGSD 295

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNN----ACGIEQIAGYAT 388
            N  YW+V+NSWG     EGF  I R  N     C I  +A + T
Sbjct: 296 GNQDYWIVKNSWGTSWGIEGFIYIRRNTNLKYGVCAINYMASFPT 340


>gi|301762528|ref|XP_002916735.1| PREDICTED: cathepsin W-like [Ailuropoda melanoleuca]
          Length = 374

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 162/356 (45%), Gaps = 62/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEI 116
           + F  F ++  R Y+N EE   R + F ++  +  +          +G + FSD + EE 
Sbjct: 40  QVFTLFQIQYNRSYSNPEEYARRLDIFARNLAQAQQLEAEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       + R+V +   V + +   E    +P   DWRK K V  P   Q  C  
Sbjct: 100 GQLYG-------HRRMVGEAPSVGRKVGSEESGESMPPRCDWRKLKGVISPIKRQENCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA ++AG                        +E  + I+  + V+ S  +L++C +   
Sbjct: 153 CWAMAVAGN-----------------------VEALWGIRYNRSVQVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  +   + +GL SE+DYP++  N +  KC     K K+   +DF+    +E
Sbjct: 190 GCRGGFVWDAFLTILNNSGLASEQDYPFR-GNSKPHKCLAKNYK-KVAWIQDFIMLQDNE 247

Query: 295 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------- 346
             +   L   GP++V +N  L+  Y    I+    TC P  + H+VLLVG+GK       
Sbjct: 248 QRIAWYLATQGPITVTINMKLLQQYQKGVIKATPATCDPRLVDHSVLLVGFGKSKSVAGR 307

Query: 347 -----------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
                      ++ IPYW+++NSWG    ++G+F++ RG+N CGI +    A +D+
Sbjct: 308 RAEGGSSQPHRRNPIPYWILKNSWGADWGEKGYFRLHRGSNTCGITKYPLTARVDL 363


>gi|227018328|gb|ACP18830.1| cysteine proteinase 1 [Chrysomela tremula]
          Length = 323

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 141/338 (41%), Gaps = 56/338 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHERYGTS-------EFSDRSP 113
           E +  F    G+ Y +  E K RF  F+        H      G S       +FSD + 
Sbjct: 21  ELWADFKKAHGKTYKSLREEKLRFNIFQDTLREIAAHNAKYESGESTYYLAINQFSDITD 80

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE               + V  R  +E M +     G  P++ DWR +    P  +Q  C
Sbjct: 81  EEF---------RAMLMKNVESRPSLEDMEIANLTVGAAPESIDWRTEGAVLPIRNQEDC 131

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS                           +EGQ AIK+G     S  QLV+C+ +
Sbjct: 132 GSCWAFSAVA-----------------------AVEGQAAIKSGSKTPLSVQQLVDCSTE 168

Query: 234 C--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSK--VKLFTGKDFLH 289
              SGC+G     + +Y    GLES+  YPY    G    C  DKS   VKL   K    
Sbjct: 169 GGNSGCNGGLMNGAFDYIKANGLESDAKYPY---TGTDDSCKADKSSSLVKLTGYKKVAS 225

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
              S  +K+ +   GP+SV + +DL   Y G     N+  C  + L H V  VGYG  + 
Sbjct: 226 SEAS--LKEAVGTVGPISVAVYADLWRSYGGGIF--NNILCLGFGLDHGVTAVGYGTDNG 281

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 386
             YW V+NSWG    +EG+ ++ R   + CGI Q A Y
Sbjct: 282 KKYWPVKNSWGESWGEEGYIRMARDTLHNCGINQQASY 319


>gi|33333702|gb|AAQ11969.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHERYGTS------EFSD 110
           ++ E ++ F +  G+ Y +  E K RF  F+      Q+ +KK+ER   S      +F+D
Sbjct: 18  SVYEEWQQFKLDHGKTYRSLVEEKRRFSVFQKNLIDIQEHNKKYERGEVSFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E   ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDTDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL H VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNHGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|324513891|gb|ADY45690.1| Cysteine proteinase [Ascaris suum]
          Length = 398

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 158/336 (47%), Gaps = 50/336 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHER---YGTSEFSDRSP 113
           +L++F  F+ K  + Y +  +  +RF  +  +         + + R   YG ++F+D S 
Sbjct: 87  LLDSFMEFMHKYDKVYVDSAQFVKRFRIYVNNMANIDALNERNYGRSIIYGENQFADWSE 146

Query: 114 EE---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           +E   IL   GF   +  ++R +   +  E M+   E    +P+ +DWR  NV  P   Q
Sbjct: 147 DEFRQILLPRGF--YKNFHKRAIFIDQPDEIMMPRKE---IIPEHFDWRPYNVVTPVKAQ 201

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAF+  G                        +E  YAI TG+L   S+ QL++C
Sbjct: 202 LNCGSCWAFATTG-----------------------TVESAYAIGTGELKSLSEQQLLDC 238

Query: 231 AKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
             + + CDG   + ++ Y ++ GL +E DYPY      + +  Y + +        FLH 
Sbjct: 239 NVENNACDGGDIDKALRYVYEEGLMTEYDYPYV---AHRQETCYLRGETTRIKAAVFLHQ 295

Query: 291 NGSETMKKILYKYGPLSVLLNSDL-IHDYNGTPIRKNDETCSPYDLG-HAVLLVGYG--K 346
           + +  +  +++  GP++V +N    +  Y G     N   C    +G HA+ +VGYG   
Sbjct: 296 DEASIIDWLIHN-GPVNVGVNVTADMKAYKGGVYTPNKWECENKIIGTHAMNIVGYGTWN 354

Query: 347 QDNIPYWLVRNSWG-PIGPDEGFFKIERGNNACGIE 381
           + N  YW+V+NSWG   G + G+    RG N+CGIE
Sbjct: 355 KTNEKYWIVKNSWGQSYGVENGYVYFARGINSCGIE 390


>gi|375073982|gb|AFA34858.1| cathepsin L-like protein [Trypanosoma dionisii]
          Length = 467

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 144/340 (42%), Gaps = 47/340 (13%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSP 113
           E +   F  F  + GR Y +  E   R   F+++            H  +G + FSD + 
Sbjct: 32  ETLASQFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANPHATFGVTPFSDLTR 91

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+    +     A   K  ++ ++V   G  P A DWR +    P  DQ  C
Sbjct: 92  EE------FRSRHHSGAAHFAAGRKRARVPVDVGV-GDAPAAVDWRDRGAVTPVKDQGQC 144

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +    L   S+  LV C   
Sbjct: 145 GSCWAFSAIGN-----------------------VEGQWFLAGNALTSLSEQMLVSCDTM 181

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLH 289
            SGCDG     + E+    H   + +E+ Y Y + +G    C      V  + TG   L 
Sbjct: 182 DSGCDGGLMNSAFEWIVEHHNGTVYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLP 241

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            + ++ M   L   GPL+V +++     Y G  +     +C   +L H VLLVGY     
Sbjct: 242 PDEAK-MATWLAANGPLAVAVDASSWMFYTGGVL----TSCVSNELDHGVLLVGYNDSAA 296

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            PYW+V+NSWG +  ++G+ +I +G N C +++ A  A +
Sbjct: 297 PPYWIVKNSWGTLWGEDGYVRIAKGTNQCLVKEEASSAVV 336


>gi|332326591|gb|AEE42619.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+    LV  S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAXHGLVRLSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G+  +C      V       ++     
Sbjct: 188 CGGGLMTQAFEWLLRNMNGTMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESX 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C    L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIAVDASPFMSYESGVL----TSCVGKXLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|394331822|gb|AFN27130.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 138/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +++G   +C+     V       ++    S
Sbjct: 188 CGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYESGVL----TSCAGITLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|56756955|gb|AAW26649.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGKELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKYGDINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|401430108|ref|XP_003879535.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491914|emb|CBZ40911.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 359

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SSVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + SK+ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSKLVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    + HAVLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQVNHAVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|149751227|ref|XP_001490649.1| PREDICTED: cathepsin K-like [Equus caballus]
          Length = 329

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSHTRSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL V
Sbjct: 222 RGYREIPQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYYDENCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMASFPKM 329


>gi|394331820|gb|AFN27129.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 138/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G   +C+     V       ++    S
Sbjct: 188 CRGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLV Y +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYQSGVL----TSCAGMPLNHGVLLVWYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 166/395 (42%), Gaps = 63/395 (15%)

Query: 14  AIMLIQAVFLLCGVASCLCLPS------LTDRITDQVVARVDTLAIEGSLTFDNENILET 67
            +++   +FLLC VA+            ++DR+ D   + V  L               +
Sbjct: 6   GLVVSSILFLLCCVAAGSSFDESNPIKLVSDRLHDFESSFVKVLG--------QSRRALS 57

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERY--GTSEFSDRSPEEILCK 119
           F  F  + G++Y  + E+K RF  F +        +KK   Y  G ++F+D + +E    
Sbjct: 58  FARFAHRHGKRYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTLGLNQFADWTWQEFQ-- 115

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
              K+     +   A      K+      +  +P+  DWR++ +  P  +Q  CGSCW F
Sbjct: 116 ---KYRLGAAQNCSATTRGNHKL-----TNALLPETKDWREEGIVSPVKNQGHCGSCWTF 167

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  Y    GK +  S+ QLV+CA+  +  GC
Sbjct: 168 STTGA-----------------------LEAAYHQAFGKGISLSEQQLVDCARAFNNFGC 204

Query: 238 DGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSET 295
           +G     + EY     GL++E+ YPY    G+   C +    V +   +   +     + 
Sbjct: 205 NGGLPSQAFEYIKFNGGLDTEEAYPY---TGKDDACKFSSENVGVRVVESVNITLGAEDE 261

Query: 296 MKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
           +K  +    P+SV          Y       +    +P D+ HAVL VGYG ++ IPYWL
Sbjct: 262 LKHAVAFVRPVSVAFEVVGSFRLYKEGVYTTSTCGSTPMDVNHAVLAVGYGVENGIPYWL 321

Query: 355 VRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           ++NSWG    D G+FK+E G N CGI   A Y  +
Sbjct: 322 IKNSWGEDWGDNGYFKMEMGKNMCGIATCASYPVV 356


>gi|37911662|gb|AAR05023.1| cathepsin L-like protein [Tenebrio molitor]
          Length = 336

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 161/360 (44%), Gaps = 51/360 (14%)

Query: 50  TLAIEG-SLTFDNENILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE 101
            +AI G S    +  + E ++ F     R Y N +E        +++ E F++   K  +
Sbjct: 8   AIAIYGASAALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQ 67

Query: 102 -----RYGTSEFSDRSPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDA 155
                  G + F+D +PEE+   T G       ++  +  + + +  L    +    P +
Sbjct: 68  GLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPAS 124

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
           +DWR + +  P  +Q +CGSCWAFS  G                        +E Q  I 
Sbjct: 125 FDWRDQGMVSPVKNQGSCGSCWAFSSTGA-----------------------IESQMKIA 161

Query: 216 TGKLVEFSKS--QLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKC 272
            G   + S S  QLV+C     GC G +   +  Y  Q  G++SE  YPY+ A+G    C
Sbjct: 162 NGAGYDSSVSEQQLVDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADG---NC 218

Query: 273 AYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETC 330
            YD ++V    +G  +L       +  ++   GP++V  ++D     Y+G      + TC
Sbjct: 219 HYDPNQVAARLSGYVYLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTC 276

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
                 HAVL+VGYG ++   YWLV+NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 277 ETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 336


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 153/337 (45%), Gaps = 53/337 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHE-RYGTSEFSDRSPEEILC 118
           F  +     RQYA+ +E   R E +        + +   +H    G +EF D +  E   
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 119 K-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
           K  G +++     +  A    + +M+        +PD+ DWR   +  P  +Q  CGSCW
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMV-------SLPDSVDWRTAGIVTPVKNQGQCGSCW 133

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CS 235
           +FS  G                        +EGQ+A KTG LV  S+  LV+C+ Q    
Sbjct: 134 SFSTTGS-----------------------VEGQHARKTGTLVSLSEQNLVDCSSQEGNE 170

Query: 236 GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGS 293
           GC+G   + + EY     G+++E  YPY    G  KF  A   + V  +  +D +   GS
Sbjct: 171 GCNGGLMDDAFEYIIKNGGIDTEASYPYTATTGTCKFNAANIGATVASY--QDII--TGS 226

Query: 294 ET-MKKILYKYGPLSVLLNSDLIH-DYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ-DNI 350
           E+ ++  +   GP+SV +++  I+  +  T +  N++ CS   L H VL VGYG   +  
Sbjct: 227 ESDLQNAVATVGPVSVAIDASHINFQFYFTGVY-NEKKCSTTQLDHGVLAVGYGTSTEGK 285

Query: 351 PYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGY 386
            YWLV+NSWG      G+  + R  +N CGI   A Y
Sbjct: 286 DYWLVKNSWGATWGKAGYIWMSRNADNQCGIATSASY 322


>gi|41152538|gb|AAR99518.1| cathepsin L protein [Fasciola hepatica]
          Length = 326

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      +K ++   GP +V ++  SD +   +G      
Sbjct: 204 --CRYNEQLGVAKVTGYYTVHSGSEVELKNLVGSEGPAAVAVDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLSVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 317


>gi|226476132|emb|CAX72156.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG++ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKHADINHGVLVVGYGEEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 146/317 (46%), Gaps = 47/317 (14%)

Query: 85  IKERFEYFKQDGHK-----KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
            K+  +Y ++   K     K    G ++F+D   EE     G +  +  Y R V     +
Sbjct: 66  FKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEFRMYNGLR-RDYNYSREVQCSNHL 124

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
               +        PD  DWRKK       +Q  CGSCW+FS  G                
Sbjct: 125 TPEYL------VAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGS--------------- 163

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLES 256
                   LEGQ+  K+GKLV  S+ QLV+C+ +    GC+G   + + EY     G+E+
Sbjct: 164 --------LEGQHFHKSGKLVSLSEQQLVDCSGKFGNEGCNGGLMDQAFEYIITNGGIET 215

Query: 257 EKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSD-- 313
           E++YPY   +  + +C + KS+V           +G ET +K  + + GP+S+ +++   
Sbjct: 216 EEEYPY---DARQERCHFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQ 272

Query: 314 LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 373
               Y+G     ++  CS  +L H VL+VGYG  D   YWLV+NSWG     EG+ K+ R
Sbjct: 273 SFQLYSGGVY--DEPKCSSTELDHGVLVVGYGTDDGQDYWLVKNSWGTTWGLEGYVKMSR 330

Query: 374 G-NNACGIEQIAGYATI 389
             +N CG+   A Y  +
Sbjct: 331 NQDNQCGVATQASYPLV 347


>gi|47224192|emb|CAG13112.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 327

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 152/338 (44%), Gaps = 56/338 (16%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYF--------KQDGHKKHERYGTSEFSDRSPEEIL 117
           + FK+++    + Y+  +E  +R + F        K +G       G ++FSD +  E  
Sbjct: 27  QHFKSWMALHNKAYS-VQEFHQRLQIFTENKRRIEKHNGGNHSFTMGLNQFSDMTFAEF- 84

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSC 176
            +  F WSE   +   A +    K       + P P++ DWR K N   P  +Q ACGSC
Sbjct: 85  -RKRFLWSEP--QNCSATKGSYMKT------NSPQPESIDWRTKGNYVTPVKNQGACGSC 135

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           W FS  G                        LE   AI TGKLV  S+ QLV+CA   + 
Sbjct: 136 WTFSTTG-----------------------CLESVTAINTGKLVPLSEQQLVDCAWDFNN 172

Query: 236 -GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG- 292
            GC+G     + EY  +  GL +E  YPY    G   KC Y       F  K+ ++    
Sbjct: 173 HGCNGGLPSQAFEYIKYNKGLMTESGYPYTAFEG---KCKYKPELAAAFV-KNVVNITAY 228

Query: 293 -SETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
             + M+  +  + P+S    +  D +H Y G     +    +   + HAVL VGYG  ++
Sbjct: 229 DEKGMEDAVATHNPVSFAFEVTDDFMH-YKGGVYSSSRCHKTTDKVNHAVLAVGYGNNNS 287

Query: 350 -IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
            +PYW+V+NSWGP   + G+F IERG N CG+   + Y
Sbjct: 288 SVPYWIVKNSWGPYWGENGYFLIERGKNMCGLAACSSY 325


>gi|334265690|ref|YP_004376219.1| cathepsin [Clostera anachoreta granulovirus]
 gi|315451014|gb|ADU24593.1| cathepsin [Clostera anachoreta granulovirus]
 gi|327553705|gb|AEB00299.1| cathepsin [Clostera anachoreta granulovirus]
          Length = 332

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 77/354 (21%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSE 107
           SL ++ +N    F+ F+    + Y++ +E   R+E FK++           KH  +  + 
Sbjct: 17  SLKYNLDNSETLFEEFVTNFNKTYSSQDEKLIRYEIFKKNLALINNKNMESKHATFDINI 76

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKML------MEVEKDGP---VPDAWDW 158
           +SD    ++L +T       T  RI   +  + K +      ++V  D P   +P+ +DW
Sbjct: 77  YSDLHKNDLLHRT-------TGLRIGLKKNPLFKAITFRECGVQVIGDEPHALLPETFDW 129

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R +N      DQ  CG+CWAFS  G                        +E  + IK G 
Sbjct: 130 RLRNGVTSVKDQLQCGACWAFSALGN-----------------------IESLHKIKYGV 166

Query: 219 LVEFSKSQLVECAKQCSGCDGCFFEPSIE-YTHQAGLESEKDYPYKNANGEKFKCAYDKS 277
            ++ S+  LV C    +GCDG     ++E   ++ GL +E+D PY    G    C   K 
Sbjct: 167 ELDLSEQHLVNCDPLNNGCDGGLMHWALENILYEGGLVAERDEPYF---GYDAVCK-PKR 222

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-----------SDLIHDYNGTPIRKN 326
                +G           ++++L   GP+SV ++           +D+ H+ NG      
Sbjct: 223 LSSTISGCTRFVLQNENRLRELLVVNGPVSVAIDVIDVIDYKEGIADMCHNKNG------ 276

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
                   L HAVLLVGYG  +++PYW+++NSWG    + GFF+++R  N+CGI
Sbjct: 277 --------LNHAVLLVGYGVDNDVPYWILKNSWGENWGENGFFRVQRNVNSCGI 322


>gi|209731972|gb|ACI66855.1| Cathepsin H precursor [Salmo salar]
          Length = 328

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 145/311 (46%), Gaps = 48/311 (15%)

Query: 84  EIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML 143
           E K R +Y  +  HK     G ++FSD +  E   +  F  +E   +   A +       
Sbjct: 53  ENKRRIDYHNEGNHKF--TMGLNQFSDLTFAEF--RKSFLLTEP--QNCSATKGS----- 101

Query: 144 MEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLL 202
             V  +GP P++ DWRKK N      +Q +CGSCW FS  G                   
Sbjct: 102 -HVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTFSTTG------------------- 141

Query: 203 IFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKD 259
                LE   AI TGKL++ S+ QLV+CA+  +  GC+G     + EY     G+ +E D
Sbjct: 142 ----CLESVTAIATGKLLQLSEQQLVDCAQAFNNHGCNGGLPSQAFEYIKFNKGIMTEDD 197

Query: 260 YPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDLI 315
           YPY   +     C +       F  KD ++    + M  +  + ++ P+S+   + SD +
Sbjct: 198 YPYTAHDD---TCKFKTDLAAAFV-KDVVNITKYDEMGMVDAVARFNPVSLAYEVTSDFM 253

Query: 316 HDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN 375
           H Y+G      +   +   + HAVL VGYG++   PYW+V+NSWG     +G+F IERG 
Sbjct: 254 H-YDGGVYTSKECHNTTDTVNHAVLAVGYGEEKGTPYWIVKNSWGSSWGMKGYFFIERGK 312

Query: 376 NACGIEQIAGY 386
           N CG+   + Y
Sbjct: 313 NMCGLAACSSY 323


>gi|351694995|gb|EHA97913.1| Cathepsin L1 [Heterocephalus glaber]
          Length = 278

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 120/247 (48%), Gaps = 36/247 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P + DWRKK    P  +Q  CGSCWAFS  G                        LEGQ
Sbjct: 59  LPKSVDWRKKGYVTPVKNQGQCGSCWAFSATGS-----------------------LEGQ 95

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
              KTG+LV  S+  LV+C++     GC+G   + + EY  +  GLESEK YPY+  +G 
Sbjct: 96  MFRKTGQLVSLSEQNLVDCSQPQGNQGCNGGLMDFAFEYVKENKGLESEKSYPYEGKDG- 154

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
              C Y K ++       F+     E  + K + + GP+SV +++ L+           D
Sbjct: 155 --SCRY-KPELSAANDTGFVDIPQREKALMKAVAEKGPISVAVDAGLMSFQFYKDGIYFD 211

Query: 328 ETCSPYDLGHAVLLVGYGKQ----DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
             CS  DL H VL+VGYG +    +   YWLV+NSWGP    EG+ KI R  NN CGI  
Sbjct: 212 PECSSKDLNHGVLVVGYGYEEVDTEKNEYWLVKNSWGPEWGAEGYIKIARNRNNHCGIAT 271

Query: 383 IAGYATI 389
            A Y + 
Sbjct: 272 AASYPST 278


>gi|303275866|ref|XP_003057227.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461579|gb|EEH58872.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 329

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 153/346 (44%), Gaps = 60/346 (17%)

Query: 68  FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHE-------RYGTSEFSDRSPEEILCK 119
           F AF+++ G+ YA+D +E  +R E F ++  +  E        YG + F+D + +E    
Sbjct: 8   FDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARDGAEYGATPFADLTEDEFASS 67

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
              +            R +  ++L  +  +  +P  +DWR      P  +Q  CGSCW+F
Sbjct: 68  LLMREPIDAARVERLKRHESSRVLPHLPTEN-IPLNFDWRALGAVTPVKNQGMCGSCWSF 126

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                        +EG + +K+G LV  S+ QLV+C   C     
Sbjct: 127 SATG-----------------------AVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSG 163

Query: 235 ----SGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFL 288
               SGCDG     ++ Y   + GL++E  YPY  A G+ + K   D       T   F+
Sbjct: 164 TACDSGCDGGLPANAMAYVVKRGGLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFV 223

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYN---GTPIRKNDETCSPYDLGHAVLLVGYG 345
             + S+ +   L K+GPLSV +++  +  Y      P       C    L H VL+VG+G
Sbjct: 224 SADESQ-IAAALVKHGPLSVGIDARWMQLYRRGVACPW-----ACDKTRLDHGVLIVGFG 277

Query: 346 KQDNIP--------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            +   P        +WL++NSWG    +EG++KI +   +CG+  +
Sbjct: 278 AEGRAPARGFRREPFWLIKNSWGARWGEEGYYKICKDKGSCGVNTM 323


>gi|401416326|ref|XP_003872658.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|14348750|emb|CAC41275.1| CPB2 protein [Leishmania mexicana]
 gi|322488882|emb|CBZ24132.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 139/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ  CGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GCDG
Sbjct: 154 SSVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCDG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYLPECS-NSSELVVGAQIDSHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C   ++ HAVLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKEVNHAVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|5853329|gb|AAD54424.1|AF182079_1 thiol protease [Matricaria chamomilla]
          Length = 501

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 129/289 (44%), Gaps = 43/289 (14%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREK------VEKMLMEVEKDGPVPDAWD 157
           G ++F+D S EE      FK  E    ++   R        V++ +    +    P + D
Sbjct: 97  GLNKFADLSNEE------FK--EMYMSKVKGSRSNELKMGGVKRNMSVSSRTCDAPTSLD 148

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR K V  P  DQ  CGSCWAFS++G                        +E   AI TG
Sbjct: 149 WRDKGVVTPMKDQGQCGSCWAFSVSGS-----------------------IESANAIATG 185

Query: 218 KLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDK 276
            L+  S+ +LV+C     GCDG   + +  +     GL+SE DYPY ++NG   KC   K
Sbjct: 186 DLIRLSEQELVDCDTYDYGCDGGNMDTAYRWIIKNGGLDSEDDYPYTSSNGRDGKCDKTK 245

Query: 277 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDL 335
           S   + +   ++    +E          P+++ ++ S          +     +  PYD+
Sbjct: 246 SAKSVVSLDSYVEVESNEDAVLCAVATTPVTIGIVGSAYDFQLYTGGVYNGQCSSKPYDI 305

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG----NNACGI 380
            HAVL+VGYG QD   YW+V+NSWG     EG+  +ER     N  CG+
Sbjct: 306 DHAVLIVGYGSQDGKDYWIVKNSWGTYWGLEGYILMERNTDIKNGVCGM 354


>gi|449471885|ref|XP_004186123.1| PREDICTED: LOW QUALITY PROTEIN: pro-cathepsin H [Taeniopygia
           guttata]
          Length = 334

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 122/251 (48%), Gaps = 36/251 (14%)

Query: 152 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
           VPD+ DWRKK N   P   Q ACGSCW FS  G                        LE 
Sbjct: 109 VPDSIDWRKKGNFVTPVKIQGACGSCWTFSTTG-----------------------CLES 145

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANG 267
             AI TGKL+  ++ QLV+CA+  +  GC G     + EY  +  GL  E  YPY+  NG
Sbjct: 146 AIAIATGKLLSLAEQQLVDCAQAFNNHGCSGGLPSQAFEYILYNRGLMGEDSYPYRAKNG 205

Query: 268 E-KFKCAYD--KSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNG 320
             +F+   D    K   F  KD ++      + M + + ++ P+S    + SD +H   G
Sbjct: 206 TCRFQPDNDIRVGKAIAFV-KDVINITQYDEDGMVEAVGRHNPVSFAFEVTSDFMHYRKG 264

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
                  E  +P  + HAVL VGYG++D  PYW+V+NSWG +   +G+F IERG N CG+
Sbjct: 265 VYSNPRCEH-TPDKVNHAVLAVGYGQEDGTPYWIVKNSWGRLWGMQGYFLIERGKNMCGL 323

Query: 381 EQIAGYATIDV 391
              A Y    V
Sbjct: 324 AACASYPVPQV 334


>gi|417409774|gb|JAA51378.1| Putative cathepsin k, partial [Desmodus rotundus]
          Length = 331

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 134/292 (45%), Gaps = 46/292 (15%)

Query: 106 SEFSDRSPEEILCK-TGFK----WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK 160
           +   D + EE++ K TG K     S     R V D E            G VPD+ D+RK
Sbjct: 78  NHLGDMTSEEVVQKMTGLKVPPSHSRSNDTRYVPDWE------------GKVPDSIDYRK 125

Query: 161 KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
           K    P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+
Sbjct: 126 KGYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLL 162

Query: 221 EFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-K 278
             S   LV+C  +  GC G +   +  Y  +  G++SE  YPY    G+   C Y+ + K
Sbjct: 163 NLSPQNLVDCVSENDGCGGGYMTNAFHYVQKNQGIDSEDAYPYV---GQDESCMYNPTGK 219

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
                G   +     + +K+ + + GP+SV +++ L      +     D+ C+  +L HA
Sbjct: 220 AAKCRGYKEIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDKNCNSDNLNHA 279

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           VL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 280 VLAVGYGIQKRKKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPKM 331


>gi|74765984|sp|Q24940.1|CATLL_FASHE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|497700|gb|AAA29136.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 111/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      +K ++    P +V ++  SD +   +G      
Sbjct: 204 --CRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIASLA 317


>gi|226476110|emb|CAX72145.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       N+  C   D+ H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESNE--CKYGDINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 160/362 (44%), Gaps = 59/362 (16%)

Query: 48  VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 103
           V  LA+  +L      +   +  F +   +QY++  E   R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELRRKAIF-QDNLVKIEEHNAKF 64

Query: 104 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV-EKMLMEVEKDG-PV 152
                      ++F+D + +E +             R +A + K+ EK+ +   K G P 
Sbjct: 65  AKGEVTYTKAVNQFADMTADEFMAYV---------NRGLATKPKMNEKLRIPFVKSGKPA 115

Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
               DWR K VT    DQ  CGSCW+FS  G                        +EGQ 
Sbjct: 116 AAEVDWRSKAVT-EVKDQGQCGSCWSFSTTG-----------------------AVEGQL 151

Query: 213 AIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF 270
           AI    L   S+  LV+C+ Q   +GC+G + + + +Y H  G+ SE  YPY   +G   
Sbjct: 152 AISGKGLTSLSEQNLVDCSSQYGNAGCNGGWMDSAFDYIHDNGIMSESAYPYTAMDG--- 208

Query: 271 KCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDE 328
            C +D S+ V    G   +       ++  +   GP++V L+ ++ +  Y+G  +   D 
Sbjct: 209 NCRFDASQSVTSLQGYYDIPSGDESALQDAVANNGPVAVALDATEELQLYSGGVLY--DT 266

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 387
           TCS   L H VL+VGYG +    YW+V+NSWG    ++G+++  R  NN CGI   A Y 
Sbjct: 267 TCSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYP 326

Query: 388 TI 389
            +
Sbjct: 327 AL 328


>gi|332326585|gb|AEE42616.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 139/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  BQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHRLXXLSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY ++ G+  +C      V       ++    +
Sbjct: 188 CXGGLMTQAFEWLLRXMNGTMFTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKSGPISIGVDASSFMSYESGVL----TSCAGKHLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|380798253|gb|AFE71002.1| pro-cathepsin H preproprotein, partial [Macaca mulatta]
          Length = 242

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 119/247 (48%), Gaps = 40/247 (16%)

Query: 150 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           GP P + DWRKK N   P  +Q ACGSCW FS  G                        L
Sbjct: 21  GPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTTGA-----------------------L 57

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
           E   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPY+  
Sbjct: 58  ESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGK 117

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGT 321
           +G+   C +   K   F  KD  +      E M + +  Y P+S    +  D +    G 
Sbjct: 118 DGD---CKFRPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYKTGI 173

Query: 322 PIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
               +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG
Sbjct: 174 ---YSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCG 230

Query: 380 IEQIAGY 386
           +   A Y
Sbjct: 231 LAACASY 237


>gi|351721011|ref|NP_001238219.1| P34 probable thiol protease precursor [Glycine max]
 gi|1199563|gb|AAB09252.1| 34 kDa maturing seed vacuolar thiol protease precursor [Glycine
           max]
          Length = 379

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 157/344 (45%), Gaps = 54/344 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSDRSPEEI 116
           F+ +  + GR Y N EE  +R E FK + +               R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CG  
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGRG 159

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E  +AI TG LV  S+ +LV+C ++  G
Sbjct: 160 WAFSATG-----------------------AIEAAHAIATGDLVSLSEQELVDCVEESEG 196

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG-- 292
               +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L  +   
Sbjct: 197 SYNGWQYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDES 253

Query: 293 --SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVGYG  D
Sbjct: 254 TESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSAD 312

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 388
            + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 313 GVDYWIAKNSWGEDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356


>gi|401758202|gb|AFQ01136.1| cathepsin O2-like protease [Chilo suppressalis]
          Length = 368

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 169/380 (44%), Gaps = 72/380 (18%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYAND-EEIKERFEYF-------------KQD 95
            + I  S +   E +   F  +I K  + Y N+ EE + RF++F              + 
Sbjct: 22  VVPISYSASTSKEQLKPIFDQYIEKYNKSYKNNPEEYETRFQHFLVSMSEIDRLNSESRG 81

Query: 96  GHKKHERYGTSEFSDRSP---------EEILCKTGF-------KWSERTYERIVADREKV 139
             +   RYG ++ SD SP         +E L K+         K ++R Y  +    E+ 
Sbjct: 82  PEQYRARYGPTKLSDMSPTEYKDLHLSDEKLTKSPATYDRSWRKHNQRDYYHVQDVNERK 141

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
           E ++ +  K   +P   DWR K   G   +Q  CG+CWAFS  G                
Sbjct: 142 ENLIRK--KRASLPMLVDWRVKGAVGAVRNQGLCGACWAFSTVGT--------------- 184

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK----QCSGCDGCFFEPSIEYTHQAGLE 255
                   +E   AI TGKL   S  ++++CA+     CSG D C     +  T+   +E
Sbjct: 185 --------MESMAAINTGKLPALSVQEVIDCARLGNQGCSGGDICLLLDWLMITNTP-VE 235

Query: 256 SEKDYPYKNANGE-KFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSD 313
            EKDYP +  NG  K K      +V  FT  DF+   G+E  + + L  +GP++V +N+ 
Sbjct: 236 VEKDYPLQLTNGVCKAKKNTTGVRVTSFTCDDFV---GTEQKIIEALALHGPVAVAVNAL 292

Query: 314 LIHDYNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKI 371
              +Y G  I+ +   CS    DL HAV LVGY    ++PY++ +NSWG      G+  +
Sbjct: 293 TWQNYLGGVIQYH---CSGDAMDLNHAVQLVGYDLTADVPYYIAKNSWGSDFGLNGYIHL 349

Query: 372 ERGNNACGIEQIAGYATIDV 391
             G+N CG+      ATIDV
Sbjct: 350 AIGSNICGLAN--EVATIDV 367


>gi|308322047|gb|ADO28161.1| cathepsin H [Ictalurus furcatus]
          Length = 326

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 152/339 (44%), Gaps = 55/339 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQDGHK-------KHE-RYGTSEFSDRSPEEILC 118
            FK ++ +  +QY   EE  +R + F ++  K        H+ R G ++FSD +  E   
Sbjct: 27  VFKTWMSEHNKQYG-LEEYYQRLQIFTENKKKIDTHNAGNHKFRMGLNQFSDMTFAEF-- 83

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCW 177
                   + +  +   +E        V   G  PD+ DWRKK N      +Q ACGSCW
Sbjct: 84  --------KKFYLLKEPQECNATKGNHVRGVGLYPDSIDWRKKGNYVTEVKNQGACGSCW 135

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
            FS  G                        LE   AI TGKL   ++ QLV+CA   +  
Sbjct: 136 TFSTTG-----------------------CLESVTAIATGKLPLLAEQQLVDCAGAFNNH 172

Query: 236 GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC+G     + EY  +  GL +E DYPY   +G    C +D      F  KD ++    +
Sbjct: 173 GCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRDG---PCKFDPKLAAAFV-KDVVNITKYD 228

Query: 295 TMKKI--LYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
            M  +  + +  P+S+      + +H  +G     N+   +   + HAVL VGY +++  
Sbjct: 229 EMGIVDAVARLNPVSIAFEVLPEFMHYKDGV-YTSNECHNTTETVNHAVLAVGYAEENGT 287

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+V+NSWGP    +G+F IERG N CG+   A Y  +
Sbjct: 288 PYWIVKNSWGPQWGIDGYFYIERGQNMCGLAACASYPLV 326


>gi|334314327|ref|XP_001368532.2| PREDICTED: cathepsin H-like [Monodelphis domestica]
          Length = 344

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 120/252 (47%), Gaps = 40/252 (15%)

Query: 145 EVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLI 203
            V + GP PD  DWRKK N   P  +Q  CGSCW FS  G                    
Sbjct: 118 HVRRVGPYPDFMDWRKKGNYVSPVKNQGGCGSCWTFSTTGG------------------- 158

Query: 204 FPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDY 260
               LE   AI TGKL+  ++ QLV+CA+  +  GC+G     + EY  +  G+  E  Y
Sbjct: 159 ----LESAVAIATGKLLSLAEQQLVDCAQAFNNHGCNGGLPSQAFEYIMYNNGIMGEDTY 214

Query: 261 PYKNANGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIH 316
           PY+  +G    C +   K   F  KD ++      E M + +  + P+S    +  D + 
Sbjct: 215 PYEGKDG---TCRFKPDKAIAFV-KDVVNITIYDEEAMTEAVAHHNPVSFAFEVTEDFMS 270

Query: 317 DYNGTPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 374
             +G     ++  C  SP  + HAVL VGYGK + I YW+V+NSWG    + G+F IERG
Sbjct: 271 YRDGI---YSNPRCDKSPDKVNHAVLAVGYGKNNGILYWIVKNSWGTSWGNNGYFLIERG 327

Query: 375 NNACGIEQIAGY 386
            N CG+   A Y
Sbjct: 328 KNMCGLADCASY 339


>gi|41323856|gb|AAS00027.1| cathepsin L-like cysteine proteinase [Taenia solium]
          Length = 339

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 162/357 (45%), Gaps = 51/357 (14%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 100
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGVFARNLLYIKGQNRRFNAGL 76

Query: 101 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 158
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASAAG---LPDTVDW 130

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R KN+     +Q  CGSCWAFS  G                        LEG +A KTGK
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGA-----------------------LEGAFAKKTGK 167

Query: 219 LVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDK 276
           L+  S+ QLV+C+ +    GC+G +   + +Y  +  +E E  YPY+  +G    C Y++
Sbjct: 168 LISLSEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNE 224

Query: 277 SKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPY 333
           S + + T  D      G+ET + + +   GP+S+ ++ S L   +    I K+   CS  
Sbjct: 225 S-LGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRHGIYKS-HWCSSK 282

Query: 334 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +  +
Sbjct: 283 FLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADFPYV 339


>gi|401416322|ref|XP_003872656.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488880|emb|CBZ24130.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 366

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 137/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C     GC G
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMNDGCSG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 154/335 (45%), Gaps = 59/335 (17%)

Query: 57  LTFDNENILETFKAFIVKRGRQY-ANDEEIKERFEYF--KQDGHKKHERY---------G 104
           L+ DN+   E++KA   K G+ Y +N+ E   R  YF  K+   + + R+         G
Sbjct: 19  LSDDNQAEWESYKA---KYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKLG 75

Query: 105 TSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
            + F+D    E      F+     Y R    R  V   ++ VE +  +P + DWR K   
Sbjct: 76  LNSFADMHNGE------FRKMMNGYRRGTP-RNSV---VVHVESNITLPASVDWRTKGAV 125

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ+A+K GKLV  S+
Sbjct: 126 TPIKNQGQCGSCWAFSTTGS-----------------------LEGQHALKKGKLVSLSE 162

Query: 225 SQLVEC--AKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVKL 281
            +LV+C  A+   GCDG   + +  Y  +  G+++E+ YPY    GE   C++ KS V  
Sbjct: 163 QELVDCSAAEGNDGCDGGLMDDAFTYIKKNNGIDTEQSYPY---TGEDGTCSFKKSDVAA 219

Query: 282 FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDL--IHDYNGTPIRKNDETCSPYDLGHA 338
                    +GSE+ ++      GP+SV +++       Y       +D  CS  +L H 
Sbjct: 220 TVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQLYESGVYDVSD--CSTTELDHG 277

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER 373
           VL+VGYG  D   YWLV+NSWG      G+ ++ R
Sbjct: 278 VLVVGYGTDDGTAYWLVKNSWGTDWGHHGYIQMSR 312


>gi|13774082|gb|AAK38169.1| cathepsin L-like [Fasciola hepatica]
          Length = 310

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 128

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 129 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 187

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGP--LSVLLNSDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      +K ++    P  ++V + SD +   +G      
Sbjct: 188 --CRYNRQLGVAKVTGYYTVHSGSEVELKNLVGSRRPAAIAVDVESDFMMYRSGI---YQ 242

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TC P+ L HAVL VGYG QD   YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 243 SQTCLPFALNHAVLAVGYGTQDGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 301


>gi|378943048|gb|AFC76265.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 137/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E + R   F+++            H R+G ++F D S E +   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNPHARFGITKFFDLS-EAVFAA 96

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                +        A ++   +   +   D   VPDA DWR+K    P  +Q ACGSCWA
Sbjct: 97  RYLNGAAY----FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWA 152

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           FS  G                        +E Q+A+   KLV  S+ QLV C    +GC 
Sbjct: 153 FSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNGCG 189

Query: 239 GCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE- 294
           G     + E+        + +EK YPY + NG+  +C+             ++    SE 
Sbjct: 190 GGLMLQAFEWVLRNMNGTVFTEKSYPYVSGNGDVPECSNSSELAPGARIDGYVSMESSER 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PYW+
Sbjct: 250 VMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGEDWGEKGYVRVTMGVNAC 329


>gi|301607871|ref|XP_002933519.1| PREDICTED: cathepsin O-like [Xenopus (Silurana) tropicalis]
          Length = 370

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 152/335 (45%), Gaps = 57/335 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEI-KERFEYFKQDGHKKH--------------ERYGTSEFSD 110
             F  FI K GR Y +  ++ +ER++ F +   +++                YG ++FSD
Sbjct: 64  NAFLDFIQKYGRGYKDGSQVFQERYQIFLKSTERQNYLNAIALPTNLTSAAHYGINQFSD 123

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            S EE        +    Y      +   ++  +        P  +DWR K +  P  +Q
Sbjct: 124 LSAEEFFYTYLRSFPTGNYTSNKPFKNSAQQYFL--------PLRFDWRDKKLVTPVKNQ 175

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            +CG+CWAFS+ G                        +E  YAIK   L E S  Q+++C
Sbjct: 176 LSCGACWAFSVVGA-----------------------VESAYAIKWHTLEELSVQQVIDC 212

Query: 231 AKQCSGCDGCFFEPSIEYTHQAG--LESEKDYPYKNANGEKFKCAY-DKSKVKL-FTGKD 286
           +   SGC+G     ++++ +Q    L    +Y +K   G    C Y  K+   +   G +
Sbjct: 213 SYLDSGCNGGSTNGALKWLYQTKTKLVRASEYNFKAKTG---LCHYFPKTDFGVSINGYE 269

Query: 287 FLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
              F+G+E  M K+L   GP+ V++N+    DY G  I+ +  + +P    HAVL++GY 
Sbjct: 270 TQDFSGTEDAMMKMLVDLGPMVVIVNAVSWQDYLGGIIQHHCSSGAP---NHAVLVIGYD 326

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           K  + PYW+V+NSWG     +G+  I+ G N CGI
Sbjct: 327 KTGDTPYWIVKNSWGTAWGADGYVYIKMGENICGI 361


>gi|56756677|gb|AAW26511.1| unknown [Schistosoma japonicum]
          Length = 331

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 156/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+            + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------KRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 121/245 (49%), Gaps = 35/245 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           V D+ DWR K    P  +Q  CGSCWAFS  G                        LEGQ
Sbjct: 115 VVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTG-----------------------ALEGQ 151

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           +  KTGKLV  S+  LV+C+ +   +GC+G   + + +Y  +  G+++EK YPY   +G 
Sbjct: 152 HFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAFQYIKENGGIDTEKSYPYLAKDGV 211

Query: 269 KFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRK 325
              C Y+KS +    TG   +       +++ L   GP+S+ +++     H Y+      
Sbjct: 212 ---CHYNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTFHFYHQGVY-- 266

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIA 384
           +D  CS   L H VL VGYG  D   YWLV+NSWGP   +EG+ KI R + + CG+   A
Sbjct: 267 DDPDCSSTRLDHGVLAVGYGTDDGKDYWLVKNSWGPSWGEEGYIKIARNDHDKCGVASKA 326

Query: 385 GYATI 389
            Y  +
Sbjct: 327 SYPLV 331


>gi|431896621|gb|ELK06033.1| Cathepsin S [Pteropus alecto]
          Length = 331

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 133/293 (45%), Gaps = 44/293 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G +   D + EE++   G       ++R V  +    + L         PD+ DWR K  
Sbjct: 76  GMNHLGDMTSEEVISLMGSLTVPSQWQRNVTYKSNPNQKL---------PDSLDWRDKGC 126

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CGSCWAFS  G                        LE Q  +KTGKLV  S
Sbjct: 127 VTEVKYQGSCGSCWAFSAVGA-----------------------LEAQLKLKTGKLVSLS 163

Query: 224 KSQLVECAKQ---CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV 279
              LV+C+ +     GC+G F   + +Y     G++SE  YPYK  +G   KC YD SK 
Sbjct: 164 AQNLVDCSTEKYSNKGCNGGFMTSAFQYIIDNNGIDSEASYPYKAQDG---KCQYD-SKF 219

Query: 280 KLFTGKDF--LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
           +  T   +  L F   E +K+ +   GP+SV +++     +        D++C+   + H
Sbjct: 220 RAATCSKYTELPFGSEEALKEAVANKGPVSVAIDASHPSFFLYRSGVYYDQSCT-LKVNH 278

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
            VL+VGYG  D   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 279 GVLVVGYGNLDGKDYWLVKNSWGLNFGDKGYIRMARNSGNHCGIASYPSYPEI 331


>gi|9542|emb|CAA78443.1| cysteine proteinase [Leishmania mexicana]
          Length = 443

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  DQ ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C    +GC G
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMDNGCSG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|395856027|ref|XP_003800444.1| PREDICTED: cathepsin K [Otolemur garnettii]
          Length = 329

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R      L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPPSRSHSNDTLYIPDWEGRAPDSIDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C     GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 165 QNLVDCVSDNDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  ++ HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPISVGIDASLTSFQFYSKGVYYDESCNSDNVNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|74834619|sp|O97397.1|CATLL_PHACE RecName: Full=Cathepsin L-like proteinase; Flags: Precursor
 gi|4210800|emb|CAA76927.1| thiol protease [Phaedon cochleariae]
          Length = 324

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 131/262 (50%), Gaps = 36/262 (13%)

Query: 134 ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYL 193
           A R  +E + +     G  P++ DWR K V  P  +Q  CGSCWA S A           
Sbjct: 92  ASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTA----------- 140

Query: 194 NHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ 251
                         +E Q AIK+G  V  S  QLV+C+      GC+G F     EY   
Sbjct: 141 ------------AAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKD 188

Query: 252 AGLESEKDYPYKNANGEKFKC-AYDKSK-VKLFTGKDFLHFNGSET-MKKILYKYGPLSV 308
            GLES+ DYPY   +G++ KC A DKS+ V   TG  +     SET +K+ +   GP+S 
Sbjct: 189 NGLESDADYPY---SGKEDKCKANDKSRSVVELTG--YKKVTASETSLKEAVGTIGPISA 243

Query: 309 LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGF 368
           ++    +  Y G     +D +C   +L H V +VGYG ++   YW+++N+WG    + G+
Sbjct: 244 VVFGKPMKSYGGGIF--DDSSCLGDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGY 301

Query: 369 FKIERG-NNACGIEQIAGYATI 389
            ++ R  +++CG+E++A Y  +
Sbjct: 302 IRLIRDTDHSCGVEKMASYPIL 323


>gi|297688135|ref|XP_002821545.1| PREDICTED: cathepsin W [Pongo abelii]
          Length = 376

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 151/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFANNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEELEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRINFWDFVDVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N  L+  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKLLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGNVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAETVLSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|6630972|gb|AAF19630.1|AF194426_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 146/323 (45%), Gaps = 41/323 (12%)

Query: 73  VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 132
           V R R + ++ +I ++       G   + R G + ++D   EE +   G          I
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFMALKGSS-------GI 88

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
           +  +++      +      +P + DWR +    P  DQ  CGSCW+FS  G         
Sbjct: 89  LQAKDQSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWSFSATGS-------- 140

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH 250
                          LEGQ+  KTG LV  S+ QLV+C+      GC G   E + +Y  
Sbjct: 141 ---------------LEGQHFAKTGTLVSLSEQQLVDCSWSYGNYGCSGGLMESAYDYIR 185

Query: 251 QAG-LESEKDYPYKNANGEKFKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSV 308
            AG ++ E  YPY   NG   +C +D+SK V   TG   +     +++ + +   GP++V
Sbjct: 186 DAGGVQLESAYPYTAQNG---RCHFDQSKAVATCTGHVAIPSGDEQSLMQAVGTVGPVAV 242

Query: 309 LLNSDLIHDYNGTPIRKNDET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEG 367
            +++   +D+        D + CS   L H VL  GYG +    YWLV+NSWGP    +G
Sbjct: 243 AIDAS-GYDFQLYESGVYDRSRCSSSSLDHGVLAAGYGTEGGNDYWLVKNSWGPGWGAQG 301

Query: 368 FFKIERG-NNACGIEQIAGYATI 389
           + K+ R  +N CGI  +A Y  +
Sbjct: 302 YIKMSRNKSNQCGIATMACYPLV 324


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 164/347 (47%), Gaps = 63/347 (18%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK---------QDGHKKHERYGT--SEFSDRSP 113
           E +KA+ +   ++Y +++EE+  +  +F          Q  +++ E Y    ++FSD +P
Sbjct: 30  ELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAVRLNDFSDLTP 89

Query: 114 ----EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
               E  LC  G          ++    + E + + ++++  +PD+ +WR++       +
Sbjct: 90  GEFAERYLCLRGI---------VLTKLRRKEAVSVPLKEN--LPDSVNWRERGAVTSVKN 138

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCW+FS                         G +EG   IKTG L   S+ QL++
Sbjct: 139 QGQCGSCWSFSA-----------------------NGAIEGAIQIKTGALRSLSEQQLMD 175

Query: 230 CAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 286
           C+      GC+G     + +Y  + G+E+E DY Y   +G    C Y +  V    TG  
Sbjct: 176 CSWDYGNQGCNGGLMPQAFQYAQRYGVEAEVDYRYTERDG---VCRYRQDLVVANVTGYA 232

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
            L       +++ +   GP+SV +++     +   +G  + K   TCSPY + H VL+VG
Sbjct: 233 ELPEGDEGGLQRAVATIGPISVGIDAADPGFMSYSHGVFVSK---TCSPYAIDHGVLVVG 289

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG ++   YWLV+NSWG    + G+ K+ R  NN CGI  +A Y T+
Sbjct: 290 YGAENGEAYWLVKNSWGSSWGEGGYVKMARNRNNMCGIASMASYPTV 336


>gi|318844127|ref|NP_001187181.1| cathspsin H precursor [Ictalurus punctatus]
 gi|196475594|gb|ACG76366.1| cathspsin H [Ictalurus punctatus]
          Length = 326

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 58/367 (15%)

Query: 39  RITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK 98
           +I    VA +  +     LT ++E +   FK ++ +  +QY   EE   R + F ++  K
Sbjct: 2   KILIVTVALLHCVCATPLLTEEDEYV---FKTWMSEHNKQYG-LEEYYPRLQIFTENKKK 57

Query: 99  -------KHE-RYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
                   H+ R G ++FSD +  E           + +  +   +E        V   G
Sbjct: 58  IDTHNAGNHKFRMGLNQFSDMTFAEF----------KKFYLLKEPQECNATKGNHVRGVG 107

Query: 151 PVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             PD+ DWRKK N      +Q ACGSCW FS  G                        LE
Sbjct: 108 LYPDSIDWRKKGNYVTEVKNQGACGSCWTFSTTG-----------------------CLE 144

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNAN 266
              AI TGKL   ++ QLV+CA   +  GC+G     + EY  +  GL +E DYPY   +
Sbjct: 145 SVTAIATGKLPLLAEQQLVDCAGAFNNHGCNGGLPSQAFEYIMYNKGLMTEDDYPYVGRD 204

Query: 267 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI--LYKYGPLSVLLN--SDLIHDYNGTP 322
           G    C +D      F  KD ++    + M  +  + +  P+S+      + +H  +G  
Sbjct: 205 G---PCKFDPKLAAAFV-KDVVNITKYDEMGIVDAVARLNPVSIAFEVLPEFMHYKDGV- 259

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
              N+   +   + HAVL VGY +++  PYW+V+NSWGP    +G+F IERG N CG+  
Sbjct: 260 YTSNECHNTTETVNHAVLAVGYAEENGTPYWIVKNSWGPQWGIDGYFYIERGQNMCGLAA 319

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 320 CASYPLV 326


>gi|74178074|dbj|BAE29827.1| unnamed protein product [Mus musculus]
 gi|74178231|dbj|BAE29900.1| unnamed protein product [Mus musculus]
 gi|74220784|dbj|BAE31361.1| unnamed protein product [Mus musculus]
          Length = 326

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 70  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 120

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 121 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 157

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 158 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SK 213

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 214 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 272

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 273 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 326


>gi|268578473|ref|XP_002644219.1| Hypothetical protein CBG17217 [Caenorhabditis briggsae]
          Length = 413

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 171/396 (43%), Gaps = 54/396 (13%)

Query: 6   QRLVLEKKAIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIE---------GS 56
           +R  L     ++I ++ LL  + +      L +R        + T+A E          +
Sbjct: 44  RRRALRAVVYLMITSILLLAVLQTYYTYNRLKERQVPHNERGIQTIAHEYIAYTEKSYST 103

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEI 116
           +T        T K  + +    Y  DE +     + KQ  H     YG ++ SD + EE 
Sbjct: 104 VTHRYNKSYSTSKESLKRLNAYYTTDENVAN---WNKQKEHGS-AVYGHNDLSDWTDEE- 158

Query: 117 LCKTGFKWSERTYERIVADREKVEKM-----LMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
             KT    S   Y+R+  D E ++ +      M+ E++GP+PD +DWR +NV  P   Q 
Sbjct: 159 FTKTLLPKS--FYQRLHKDAEFIKPIPESLAAMKGERNGPLPDFFDWRDRNVVTPVKAQG 216

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAF+                           +E  YAI  G+    S+  L++C 
Sbjct: 217 QCGSCWAFAST-----------------------ATVEAAYAIAHGEKRNLSEQTLLDCD 253

Query: 232 KQCSGCDGCFFEPSIEYTHQAGLESEKDYPY--KNANGEKFKCAYDKSKVKLFTGKDFLH 289
              + CDG   + +  Y H+ GL    D PY     N       Y+ +K+K      FLH
Sbjct: 254 LDDNACDGGDEDKAFRYIHRQGLAYAVDLPYVAHRQNTCSVDGHYNTTKIK---AAYFLH 310

Query: 290 FNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQ 347
            +  ++M   L  +GP+++ ++    +  Y G     ++  C    +G HA+L+ GYG  
Sbjct: 311 HD-EDSMINWLVNFGPVNIGMSVIQPMRAYKGGVFTPSEYACKNEVIGLHALLITGYGTS 369

Query: 348 DN-IPYWLVRNSWGPI-GPDEGFFKIERGNNACGIE 381
           +    YW+V+NSWG   G + G+    RG NACGIE
Sbjct: 370 EKGEKYWIVKNSWGNTWGVENGYIYFARGINACGIE 405


>gi|226476112|emb|CAX72146.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG + 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKHADINHGVLVVGYGNEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|28971813|dbj|BAC65418.1| cathepsin L [Pandalus borealis]
          Length = 318

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 141/315 (44%), Gaps = 54/315 (17%)

Query: 83  EEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK 141
           EE  ERF         K  R+G     D + EE + + TG    ERT  ++ A   +VE+
Sbjct: 50  EEHNERFRQGLVTFDLKMNRFG-----DMTTEEFVSQMTGLNKVERTVGKVFAHYPEVER 104

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
                       D  DWR K    P  DQ  CGSCWAFS  G                  
Sbjct: 105 -----------ADTVDWRDKGAVTPVKDQGQCGSCWAFSTTGA----------------- 136

Query: 202 LIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDY 260
                 LEG + +K G LV  S+  LV+C+ + SGC+G   + + +Y     G+++E  Y
Sbjct: 137 ------LEGAHFLKHGDLVSLSEQNLVDCSTENSGCNGGVVQWAYDYIKSNNGIDTESSY 190

Query: 261 PYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYN 319
           PY+    +   C +D + V    TG   + +    T    ++  GP+SV +++     +N
Sbjct: 191 PYE---AQDLTCRFDAAHVGATVTGYADIPYADEVTQASAVHDDGPVSVCIDAG----HN 243

Query: 320 GTPIRKN----DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG- 374
              +  +    +  C+P  + HAVL VGYG ++   YWL++NSWG      G+ K+ R  
Sbjct: 244 SFQLYSSGVYYEPNCNPSSINHAVLPVGYGTEEGSDYWLIKNSWGTGWGLSGYMKLTRNK 303

Query: 375 NNACGIEQIAGYATI 389
           +N CG+   + Y  +
Sbjct: 304 SNHCGVATQSCYPNV 318


>gi|330434686|gb|AEC22811.1| cathepsin L [Macrobrachium nipponense]
          Length = 342

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 58/351 (16%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK------------KHERYGTSEFSDR 111
           ++E +++F  +  ++Y +D E   R + F ++  K            K  + G +++ D 
Sbjct: 25  VMEEWESFKFEHSKKYESDTEETFRMKIFAENKQKIAAHNKLYHTGSKTYKLGMNKYGDM 84

Query: 112 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF+ +  +     A+R       +E  +D  +P + DWR+K       DQ
Sbjct: 85  LHHEFVNMMNGFR-ANTSGAGYKANRGFQGAHFVEPPEDVVMPKSVDWREKGAVTEVKDQ 143

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            +CGSCWAFS                         G LEGQ+  +TG LV  S+  LV+C
Sbjct: 144 GSCGSCWAFSAT-----------------------GALEGQHYRQTGDLVSLSEQNLVDC 180

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           + +   +GC+G   + + +Y     G+++EK YPY+    E   C Y+ +      G D 
Sbjct: 181 SSKFGNNGCNGGLMDNAFQYIKVNGGIDTEKSYPYE---AEDEPCRYNPANA----GADD 233

Query: 288 LHF----NGSET-MKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVL 340
             F     G+E  +KK +   GP+SV +++  D    Y       +D  CS  +L H VL
Sbjct: 234 RGFVDVREGNENALKKAIATIGPVSVAIDASQDSFQFYQHGVY--SDPDCSAENLDHGVL 291

Query: 341 LVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            VGYG  +D   YWLV+NSW     D+G+ KI R  NN CGI   A Y  +
Sbjct: 292 AVGYGTTEDGQDYWLVKNSWSKSWGDQGYIKIARNQNNMCGIASAASYPLV 342


>gi|334324659|ref|XP_001371004.2| PREDICTED: cathepsin K-like [Monodelphis domestica]
          Length = 332

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R +    L   + +   PD+ D+RKK   
Sbjct: 79  NHLGDMTSEEVVQKMTGLK--------VPLSRSQNNDTLYFPDWETKTPDSIDYRKKGYV 130

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 131 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 167

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    GE   C Y+ + K    
Sbjct: 168 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYI---GEDESCMYNPTGKAAKC 224

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP++V +++ L      +     DE C+  +L HAVL V
Sbjct: 225 RGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNSDNLNHAVLAV 284

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 285 GYGIQRGTKHWIIKNSWGEQWGNKGYILMARNKNNACGIANLASFPKM 332


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 157/359 (43%), Gaps = 58/359 (16%)

Query: 53  IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GHKK 99
           +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH  
Sbjct: 13  VVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFT 72

Query: 100 HERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPDAW 156
           +   G ++F+D   EE +   TGF+         V    K  K    +     G +P   
Sbjct: 73  Y-ALGMNQFADLKNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNIGELPKTV 122

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K    P  DQ  CGSCWAFS  G                        LEGQ+   T
Sbjct: 123 DWRTKGYVTPVKDQGQCGSCWAFSTTGS-----------------------LEGQHFKAT 159

Query: 217 GKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCA 273
           GKLV  S+  LV+C+ +    GCDG   + + +Y  +A G+++E+ YPYK  +GE   C 
Sbjct: 160 GKLVSLSEQNLVDCSGKEGNEGCDGGLMDQAFQYIIKAGGIDTEESYPYKAVDGE---CH 216

Query: 274 YDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
           + K+ +    TG   +  +    ++K +   GP+SV +++  +          N+  CS 
Sbjct: 217 FKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAIDASHMSFQLYKSGVYNEPDCSS 276

Query: 333 YDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 277 TLLDHGVLAVGYGTTSDGTDYWIVKNSWAETWGMNGYLWMSRNKDNQCGIATQASYPLV 335


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 156/346 (45%), Gaps = 51/346 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY----------GTSEFSDR 111
           + E + AF V   +QY ++ E + R + F ++ HK  KH +           G +++SD 
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 112 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    G+  S+        D    E +      +  +P   DWRK     P  DQ
Sbjct: 83  LNHEFVHTLNGYNRSKTPLRSGELD----ESITFIPPANVELPKQIDWRKLGAVTPVKDQ 138

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS  G                        LEGQ+  K+ KLV  S+  L++C
Sbjct: 139 GQCGSCWSFSTTGS-----------------------LEGQHFRKSKKLVSLSEQNLIDC 175

Query: 231 AKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +++   +GC+G   + +  Y     G+++E+ YPYK    E  KC Y K + K  T + F
Sbjct: 176 SEKYGNNGCNGGLMDNAFRYIKDNGGIDTEQSYPYK---AEDEKCHY-KPRNKGATDRGF 231

Query: 288 LHFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           +       E +K  +   GP+SV +++        +     +  CS   L H VL+VGYG
Sbjct: 232 VDIESGDEEKLKAAVATVGPISVAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYG 291

Query: 346 K-QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             +D   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 292 TDEDGNDYWLVKNSWGDSWGDQGYIKMARNRDNNCGIATQASYPLV 337


>gi|41152540|gb|AAR99519.1| cathepsin L protein [Fasciola hepatica]
          Length = 239

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 21  VPDKIDWRESGYVTGVKDQGNCGSCWAFSTTGT-----------------------MEGQ 57

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 58  YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 116

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      +K ++   GP ++ ++  SD +   +G      
Sbjct: 117 --CRYNRQLGVAKVTGYYTVHSGSEVELKNLVGSEGPAAIAVDVESDFMMYRSGI---YQ 171

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TC P+ L HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 172 SQTCLPFALNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 230


>gi|403376395|gb|EJY88173.1| Cysteine protease-5 [Oxytricha trifallax]
          Length = 401

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 165/381 (43%), Gaps = 54/381 (14%)

Query: 14  AIMLIQAVFLLCGVASCLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIV 73
           A +L+ ++ ++  VA+ L + +  ++      AR     I       N    + F  F+ 
Sbjct: 24  AKLLVGSLVVVGTVAATLLILNQNEQ------ARNPAFNINFLQESGNHETQQAFIQFVA 77

Query: 74  KRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEIL---CKTG 121
           + G+ YA    +  RF+ F ++           +KH   G ++FSD + EE L    K G
Sbjct: 78  EYGKTYATKNHLNSRFDIFAKNFEMIKSHNENEEKHYEMGINKFSDMTHEEFLEHYHKQG 137

Query: 122 --FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                 E+  E   A+R    +  M  + +   P+  DWR+       GDQ++CGSCWAF
Sbjct: 138 VLIPSEEKRLEAHHANRHPSLQA-MASDDNQAAPEKVDWREAGKVSVPGDQSSCGSCWAF 196

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE-FSKSQLVECAKQCSGCD 238
           + A                         LE  +AIK     E FS   L++C +   GC 
Sbjct: 197 TTA-----------------------TTLESLHAIKNDTKPERFSVQYLIDCDEGNFGCG 233

Query: 239 GCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKK 298
           G +   + E+T   GL  E+DYP K     K  C   K K + +        N      +
Sbjct: 234 GGWMLDAYEFTKTKGLLKEEDYPRK-YTMSKNSCVDVKDKQRFYNHDQKEEDNIDNDRLR 292

Query: 299 ILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCS--PYDLGHAVLLVGYGKQDN----I 350
            L    P+ V ++S+   +  Y    +R+ D  CS     + HAV +VGYGK DN    +
Sbjct: 293 KLVSIRPVGVAMHSNPRCLMSYKNGILREEDCKCSDEKNQVNHAVTIVGYGKVDNSKDCV 352

Query: 351 PYWLVRNSWGPIGPDEGFFKI 371
            YWLV+NSWGP   D+GFFK+
Sbjct: 353 GYWLVKNSWGPRWGDQGFFKL 373


>gi|340380717|ref|XP_003388868.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 337

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 154/352 (43%), Gaps = 63/352 (17%)

Query: 60  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSD 110
           D+E + E+F  ++ K  + Y+  EE  ER   +  +          H  H  Y  ++FSD
Sbjct: 27  DDEVMAESFNMWMKKYEKTYSTMEEYNERLRVYTSNYYYIEQLNKEHGPHTEYELNQFSD 86

Query: 111 RSPEEILCKTGFKWSERTY----ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
            +  E          ++ Y    +   A     +K +     +   P A DWR+KNV  P
Sbjct: 87  LTFAEF---------KKIYLTEPQHCSATNGNFQKPV-----NARDPVAVDWREKNVITP 132

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCW FS                         G LE  +AIKTG+L+  S+ Q
Sbjct: 133 VKDQGKCGSCWTFSTT-----------------------GCLEAHHAIKTGQLISLSEQQ 169

Query: 227 LVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV+CA   +  GC+G     + EY  +  G+ESE +Y Y   +G    C ++ S V   T
Sbjct: 170 LVDCAGAFNNHGCNGGLPSQAFEYIKYNGGIESESNYNYTAKDG---VCRFNSSLVAA-T 225

Query: 284 GKDFLHF--NGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETC--SPYDLGHA 338
             D ++   +    +   +   GP+S+    +     Y     +   E C  SP  + HA
Sbjct: 226 VSDVVNITKDAEGDIGTAVANVGPVSIAFEVTKSFQHYKKGVYQGEIEVCSQSPDKVNHA 285

Query: 339 VLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           VL+VGY +      YW+V+NSW      +G+F I RG+NACG+   A Y  +
Sbjct: 286 VLVVGYNQTKLGEEYWIVKNSWSASWGMDGYFWIRRGHNACGLATCASYPIV 337


>gi|226476102|emb|CAX72141.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 156/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC G F + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCGGGFMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG + 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLTMYKSGVFESND--CKYGDINHGVLVVGYGNEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 119/247 (48%), Gaps = 33/247 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           D  +P   DWRKK    P  DQ  CGSCWAFS  G                        L
Sbjct: 113 DSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFSATGS-----------------------L 149

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNA 265
           EGQ+ +K G+LV  S+  LV+C++    +GC+G   + + +Y     G+++E+ YPY+  
Sbjct: 150 EGQHFLKDGELVSLSEQNLVDCSQSFGNNGCEGGLMDNAFKYIKANDGIDAEESYPYEAM 209

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPI 323
           +    KC + K  V   T   F+   G   + +KK +   GP+SV +++        +  
Sbjct: 210 DD---KCRFKKEDVGA-TDTGFVDIEGGSEDDLKKAVATVGPISVAIDAGHSSFQLYSEG 265

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
             ++  CS  +L H VL VGYG +D   YWLV+NSWG    D G+  + R  NN CGI  
Sbjct: 266 VYDEPECSSEELDHGVLAVGYGVKDGKKYWLVKNSWGGSWGDNGYILMSRDKNNQCGIAS 325

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 326 AASYPLV 332


>gi|21483184|gb|AAF86584.1| cathepsin L cysteine protease [Haemonchus contortus]
          Length = 355

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 42/249 (16%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P++ DWR++ +  P  +Q  CGSCWAFS                         G LEGQ
Sbjct: 138 IPESVDWREEGLVTPVKNQGMCGSCWAFSST-----------------------GALEGQ 174

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           +A  TGKLV  S+  LV+C+ +    GC+G   + + EY  +  G+++E  YPY    G 
Sbjct: 175 HARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GR 231

Query: 269 KFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           + KC + ++ V     K F+       E +KK +   GP+S+ +++     +    + K 
Sbjct: 232 ETKCHFKRNTVGA-DDKGFVDLPEGDEEALKKAVATQGPISIAIDA----GHRSFQLYKK 286

Query: 327 ----DETCSPYDLGHAVLLVGYGKQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
               DE CS  +L H VLLVGYG       YWLV+NSWGP   ++G+ +I R  NN CG+
Sbjct: 287 GVYFDEECSSEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGV 346

Query: 381 EQIAGYATI 389
              A Y  +
Sbjct: 347 ATKASYPLV 355


>gi|394331814|gb|AFN27126.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 138/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VP A DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S+ QLV C  + SG
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSEQQLVSCDDKDSG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +E  YPY +++G   +C+     V       ++    S
Sbjct: 188 CGGGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYMTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY     +PY
Sbjct: 248 ETVMAAWLAKNGPISIAVDASSFMSYESGVL----TSCAGDTLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGENGYVRVTMGVNAC 329


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 155/335 (46%), Gaps = 48/335 (14%)

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTG------FK 123
           AF    G+ Y N  E   R + F  +  K  E     E  + S +  +   G      FK
Sbjct: 15  AFKAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFK 74

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
                +++   + E+  K+ +   ++  +P + DWR++    P  DQ  CGSCW+FS  G
Sbjct: 75  ALMNGFKK-TPNAERNGKIYVPSNEN--LPKSVDWRQRGAVTPVKDQGHCGSCWSFSATG 131

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCF 241
                                   LEGQ  +KTG+LV  S+  LV+C+K    SGC+G  
Sbjct: 132 S-----------------------LEGQLFLKTGRLVSLSEQNLVDCSKTYGNSGCEGGL 168

Query: 242 FEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH-FNGSET-MKK 298
              + +Y     G+++E  YPY+     +  C + + KV   T K ++     SE  ++ 
Sbjct: 169 MNQAFQYVRDNKGIDTEASYPYE---ARENNCRFKEDKVG-GTDKGYVDILEASEKDLQS 224

Query: 299 ILYKYGPLSVLLNSDLIHD---YNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
            +   GP+SV +  D  H+   +    + K ++ CSP  L H VL VGYG ++   YWLV
Sbjct: 225 AVATVGPISVRI--DASHESFQFYSEGVYK-EQYCSPSQLDHGVLTVGYGTENGQDYWLV 281

Query: 356 RNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           +NSWGP   + G+ KI R + N CGI  +A Y  +
Sbjct: 282 KNSWGPSWGESGYIKIARNHKNHCGIASMASYPVV 316


>gi|343472974|emb|CCD15016.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 148/343 (43%), Gaps = 53/343 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ +   +L   S+  LV C   
Sbjct: 148 DSSWAFSATGN-----------------------IEGQWKVAGHELTSLSEQMLVSCDTD 184

Query: 234 CSGCDGCFFEPSIEY-----THQAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGKDF 287
             GC   F  P I +     +++  + +E+ YPY +  G    C  DKS KV     +D 
Sbjct: 185 DLGCRDGF--PDIAFNWIVSSNKGNVFTEQSYPYASGGGNVPTC--DKSGKVVGAKIRDH 240

Query: 288 LHFNGSETM-KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 346
           +     E M  + L + GP ++ +++     Y G  +     +C   ++  A LLVGY  
Sbjct: 241 VDLARDEDMIAEWLARKGPAAITVDATSFQRYTGGVL----TSCISKEMNSAALLVGYDD 296

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
               PYW+++NSWG    +EG+ +IE+G N C +++ A  A +
Sbjct: 297 TSKPPYWIIKNSWGKGWGEEGYIRIEKGTNQCLVQEYARSAVV 339


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 59/335 (17%)

Query: 73  VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 132
           +   + Y+++ E   R+  +K + ++       +E++ +S   IL    F   + T    
Sbjct: 32  MAHNKAYSHESEENVRYAIWKDNMNR------ITEYNSKSKNVILRMNHF--GDMTNTEF 83

Query: 133 VADREKVEKMLMEVEKDGPV---------PDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
              R K+  +L+   ++G           PDA DWR +    P  +Q  CGSCWAFS  G
Sbjct: 84  ---RAKMNGLLLHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTG 140

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCF 241
                                   LEGQ+  KTG+LV  S+  LV+C+     +GC+G  
Sbjct: 141 A-----------------------LEGQHFKKTGRLVSLSEQNLVDCSTDYGNNGCNGGL 177

Query: 242 FEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-----NGSET 295
            + +  Y     G+++E  YPY+  +G    C Y KS +    G D   F        + 
Sbjct: 178 MDNAFSYIKANGGIDTETGYPYEGQDG---TCRYSKSSI----GADDTGFVDIPEGDEDA 230

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLV 355
           +K+ +   GP+SV +++  +          ++  CSP  L H VL+VGYG  +   YWLV
Sbjct: 231 LKQAVATVGPVSVAIDASHMSFQFYHSGVYDEPQCSPSALDHGVLVVGYGTDNGKDYWLV 290

Query: 356 RNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           +NSWG     EG+  + R N N CGI   A Y  +
Sbjct: 291 KNSWGTGWGTEGYIYMSRNNQNQCGIASKASYPLV 325


>gi|255088003|ref|XP_002505924.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226521195|gb|ACO67182.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 291

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 141/311 (45%), Gaps = 52/311 (16%)

Query: 93  KQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV 152
           +Q   +    +G ++FSD +P E    + F  ++   E + A R  +  +      D  +
Sbjct: 7   RQAQDRGSAVHGVTQFSDLTPTEF--ASTFLGTKLANEDVAAIRSGMTTLPDYPAHD--L 62

Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
           P  +DWR++    P  +Q ACGSCW FS  G                        +EG  
Sbjct: 63  PLEFDWRERGAVTPVKNQGACGSCWTFSATGA-----------------------VEGAN 99

Query: 213 AIKTGKLVEFSKSQLVECAKQCS---------GCDGCFFEPSIEYTHQAGLESEKDYPYK 263
            +KTG+LV  S+ QLV+C   C          GC+G     ++ Y  + GL++E +YPYK
Sbjct: 100 FLKTGELVSLSEQQLVDCDHTCDPSAPRNCDYGCNGGLPLNAMRYVQKHGLDTESNYPYK 159

Query: 264 NANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTP 322
             +G   KCA  +      +   F   + +ET +   L K+GPLS+ +++  +  Y G  
Sbjct: 160 GVDG---KCASARHGPAAASVSSFNLVSTNETQIAAALLKHGPLSIGIDAAWMQTYVGG- 215

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIP---------YWLVRNSWGP-IGPDEGFFKIE 372
                  C+   L H VL+VGYG     P         YW+V+NSWGP  G + G++ I 
Sbjct: 216 -VACPWICNKAGLDHGVLIVGYGVNGTAPARPWHRRQDYWIVKNSWGPNWGVEGGYYHIC 274

Query: 373 RGNNACGIEQI 383
           +   ACG+  +
Sbjct: 275 KDRAACGLNTM 285


>gi|390608645|ref|NP_001254624.1| cathepsin S isoform 1 preproprotein [Mus musculus]
 gi|74214026|dbj|BAE29430.1| unnamed protein product [Mus musculus]
          Length = 343

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 87  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 137

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 138 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 174

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 175 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SK 230

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 231 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 289

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 290 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 343


>gi|308462787|ref|XP_003093674.1| hypothetical protein CRE_29187 [Caenorhabditis remanei]
 gi|308249538|gb|EFO93490.1| hypothetical protein CRE_29187 [Caenorhabditis remanei]
          Length = 392

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 45/328 (13%)

Query: 65  LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEE 115
           L+ F+ F  K  + + N  E KERF  F+ +  KK E          +  ++FSD S  E
Sbjct: 88  LQEFRDFNQKFQKIHKNSVEFKERFLIFRGN-LKKLEILRSSNPDIDFSINQFSDMSENE 146

Query: 116 ILCKTGFKWS-ERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
           +      K   ER ++       K   + M + +    P+  DWR         +Q ACG
Sbjct: 147 LKLILLDKKLLERNFQNSTL---KSFDLPMNLTR----PERIDWRDSGKVMSVKNQGACG 199

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAF+                           +E QYAI+ G L   S+ +LV+C  + 
Sbjct: 200 SCWAFATVAA-----------------------VESQYAIRKGTLWSLSEQELVDCDGES 236

Query: 235 SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            GC G F + ++ +    GLE+E DYPY+    ++  C  +  K ++   + +      +
Sbjct: 237 YGCGGGFLDKALGWVLGNGLETEDDYPYECTQHDQ--CYINGGKTRVTVDEGWSLGRDED 294

Query: 295 TMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG-HAVLLVGYGKQDNIPY 352
           ++   +   GP++  ++  +    Y+      ++  C    LG HA+ L+GYG + N PY
Sbjct: 295 SIADWVASVGPVAFAMSVPNSFTAYSNGVYNPSEHECRDESLGYHAMTLIGYGTEGNQPY 354

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGI 380
           W+V+NSWG    D+G+ ++ RGNNACG+
Sbjct: 355 WIVKNSWGSSWGDQGYMRLARGNNACGM 382


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 57/352 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 109
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 110 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 167
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCW+FS                         G LEGQ+  KTGKLV  S+  L
Sbjct: 138 KDQGHCGSCWSFSAT-----------------------GALEGQHFRKTGKLVSLSEQNL 174

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKV 279
           V+C+ +   +GC+G   + + +Y     G+++EK YPY+  +       K   A DK  V
Sbjct: 175 VDCSGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYV 234

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
            +  G +       E +KK L   GP+S+ +++        +     +  C   +L H V
Sbjct: 235 DIPQGDE-------EALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGV 287

Query: 340 LLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           L VGYG  ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y  +
Sbjct: 288 LAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGVATCASYPLV 339


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 119/248 (47%), Gaps = 41/248 (16%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD+ DWRKK +  P  DQ  CGSCWAFS  G                        LEGQ
Sbjct: 122 VPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGA-----------------------LEGQ 158

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
              KTGKL+  S+ QLV+C+      GC+G     +  Y  + G ESE DYPY   +G  
Sbjct: 159 LKRKTGKLISLSEQQLVDCSTYTGNEGCNGGDMNDAFRYWMRNGAESESDYPYTAMDG-- 216

Query: 270 FKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK-- 325
            KC ++ SKV     K F+       + +K  + + GP+SV +++      +G  + K  
Sbjct: 217 -KCKFNSSKVVTKVSK-FVKVPKKREDQLKLSVAQVGPVSVAIDA----TSSGFMLYKKG 270

Query: 326 --NDETCSPYDLGHAVLLVGY-GKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIE 381
              D TCS   L HAVL+VGY   +    YW+V+NSWG      G+  + R   N CGI 
Sbjct: 271 IYQDNTCSQQYLDHAVLVVGYDADKTRQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIA 330

Query: 382 QIAGYATI 389
            +A Y  I
Sbjct: 331 TMASYPLI 338


>gi|21489677|gb|AAM55195.1|AF412313_1 cathepsin L cysteine protease [Haemonchus contortus]
 gi|21483192|gb|AAL14224.1| cathepsin L [Haemonchus contortus]
          Length = 354

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 124/249 (49%), Gaps = 42/249 (16%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P++ DWR++ +  P  +Q  CGSCWAFS                         G LEGQ
Sbjct: 137 IPESVDWREEGLVTPVKNQGMCGSCWAFSST-----------------------GALEGQ 173

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           +A  TGKLV  S+  LV+C+ +    GC+G   + + EY  +  G+++E  YPY    G 
Sbjct: 174 HARATGKLVSLSEQNLVDCSTKYGNHGCNGGLMDLAFEYIKENHGVDTEDSYPYV---GR 230

Query: 269 KFKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           + KC + ++ V     K F+       E +KK +   GP+S+ +++     +    + K 
Sbjct: 231 ETKCHFKRNAVGA-DDKGFVDLPEGDEEALKKAVATQGPISIAIDA----GHRSFQLYKK 285

Query: 327 ----DETCSPYDLGHAVLLVGYGKQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
               DE CS  +L H VLLVGYG       YWLV+NSWGP   ++G+ +I R  NN CG+
Sbjct: 286 GVYFDEECSSEELDHGVLLVGYGTDPEAGDYWLVKNSWGPTWGEKGYIRIARNRNNHCGV 345

Query: 381 EQIAGYATI 389
              A Y  +
Sbjct: 346 ATKASYPLV 354


>gi|403355691|gb|EJY77431.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 111/245 (45%), Gaps = 34/245 (13%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           +G +P  WDWR   V  P  +Q  CGSCW FS  G                        L
Sbjct: 132 NGSIPTNWDWRTYGVVSPVKNQGKCGSCWTFSTVG-----------------------AL 168

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNA 265
           E  + +K G+    S+ QLV+CA      GC+G     + EY     G+  E  YPY   
Sbjct: 169 ESHFLLKYGQFRNLSEQQLVDCAGNYDNHGCNGGLPSHAFEYLKDNGGIAEETSYPYVAV 228

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTP 322
                 CA  K    +      ++ + SE  +K+ +Y +GP+S+     SD   DY    
Sbjct: 229 TN---TCALKKGSQSVGVKGGAVNVSLSEDDLKQAIYSHGPVSIAFQVASDF-RDYRAGV 284

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIE 381
                    P D+ HAVL VG+G  +N + YW+++NSWG +  D+G+FK+ERG N CG+ 
Sbjct: 285 YTSKVCKNGPQDVNHAVLAVGFGTDENKVDYWIIKNSWGAVWGDQGYFKMERGVNMCGVS 344

Query: 382 QIAGY 386
               Y
Sbjct: 345 NCNSY 349


>gi|341888721|gb|EGT44656.1| hypothetical protein CAEBREN_22029 [Caenorhabditis brenneri]
          Length = 396

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 150/333 (45%), Gaps = 46/333 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEE 115
           + + FK F  K  R++   EE K RFE F+++     E        +YG ++FSD++  E
Sbjct: 84  LQQQFKDFNAKFQREHKTLEEYKMRFEIFQKNLRDIEELNLKNPSVQYGINKFSDKTESE 143

Query: 116 I---LCKTGF---KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
           +   L    F     S  T + + + R     ++  V++    PD  DWR         D
Sbjct: 144 LKNLLMDKKFLDSSLSNSTLKTLSSYRNP-RNIIKNVQR----PDYIDWRNDGKVMSVKD 198

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAF+                           +E QYAI+ G L   S+ +LV+
Sbjct: 199 QGQCGSCWAFATVA-----------------------AVESQYAIRKGTLWSLSEQELVD 235

Query: 230 CAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
           C     GC G F   ++ +    GLE+E DYPY     ++  C  +  K +++  + +  
Sbjct: 236 CDGASYGCGGGFLTSALGFILGNGLETEDDYPYSATRHDQ--CWINGDKTRVWIDEGYQL 293

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE-TCSPYDLG-HAVLLVGYGKQ 347
               + + + +   GP+S  ++      Y    I    E  C    LG HA+ ++GYG++
Sbjct: 294 TMSEDDVAEWVANVGPVSFAMSVPKSFPYYHDGIYSPSEHECKDESLGYHAMAIIGYGQE 353

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
               YW+V+NSWG    D+G+ ++ RG NACG+
Sbjct: 354 GGQNYWIVKNSWGGSWGDQGYMRLARGVNACGM 386


>gi|392306967|ref|NP_067256.3| cathepsin S isoform 2 preproprotein [Mus musculus]
 gi|26390492|dbj|BAC25906.1| unnamed protein product [Mus musculus]
 gi|148706872|gb|EDL38819.1| cathepsin S [Mus musculus]
          Length = 342

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 86  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 136

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 137 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 173

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 174 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SK 229

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 230 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 288

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 289 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 342


>gi|118125|sp|P25784.1|CYSP3_HOMAM RecName: Full=Digestive cysteine proteinase 3; Flags: Precursor
          Length = 321

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 147/340 (43%), Gaps = 54/340 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPE 114
           ++  F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + E
Sbjct: 19  SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNE 78

Query: 115 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E      G+K   R   + V   E            GP+    DWR K +  P  DQ  C
Sbjct: 79  EFNAVMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQC 127

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        LEGQ+ +K  +LV  S+ QLV+C+  
Sbjct: 128 GSCWAFSATG-----------------------ALEGQHFLKNDELVSLSEQQLVDCSTD 164

Query: 234 CS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
               GC G +   + +Y     G+++E  YPY+    E   C +D + +           
Sbjct: 165 YGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEVQ 221

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +   
Sbjct: 222 HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTK 281

Query: 351 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 282 DYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321


>gi|218478060|dbj|BAH03396.1| cathepsin L-like cysteine peptidase [Taenia saginata]
          Length = 338

 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 168/376 (44%), Gaps = 56/376 (14%)

Query: 31  LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 88
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 89  ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPGSRAAGKRGRI 113

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G                
Sbjct: 114 WKALASAAD---LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGA--------------- 155

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESE 257
                   LEG +A KTGKL+  S+ QLV+C+ +    GC+G +   + +Y  +  +E E
Sbjct: 156 --------LEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHSIEPE 207

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDL 314
             YPY+  +G    C Y++S + + T  D      G+ET + + +   GP+S+ ++ S L
Sbjct: 208 SAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSL 263

Query: 315 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 374
              +    I K+   CS   L H VL +GYGKQD  PYWLV+NSWG     +G+  + + 
Sbjct: 264 GFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKD 322

Query: 375 -NNACGIEQIAGYATI 389
            +N CG+  +A +  +
Sbjct: 323 YHNMCGVASLADFPYV 338


>gi|341940310|sp|O70370.2|CATS_MOUSE RecName: Full=Cathepsin S; Flags: Precursor
          Length = 340

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 135 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 171

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 172 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SK 227

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 228 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 286

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 287 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340


>gi|77404197|ref|NP_001029168.1| cathepsin K precursor [Canis lupus familiaris]
 gi|122056102|sp|Q3ZKN1.1|CATK_CANFA RecName: Full=Cathepsin K; Flags: Precursor
 gi|58047562|gb|AAW65150.1| cathepsin K [Canis lupus familiaris]
          Length = 330

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +   PD+ D+RKK   
Sbjct: 77  NHLGDMTSEEVVQKMTGLK--------VPPSHSRSNDTLYIPDWESRAPDSVDYRKKGYV 128

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 129 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 165

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 166 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKC 222

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL V
Sbjct: 223 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAV 282

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 283 GYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330


>gi|390476660|ref|XP_003735160.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin K [Callithrix jacchus]
          Length = 329

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 135/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +     +    L   + +G  PD+ D+RKK   
Sbjct: 76  NHLGDMTSEEVVQKMTGLK--------VPTSYSRSNDTLYIPDWEGRAPDSVDYRKKGYV 127

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 128 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 164

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  C Y+ + K    
Sbjct: 165 QNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEESCMYNPTGKAAKC 221

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP+SV +++ L      +     DE+C+  +L HAVL V
Sbjct: 222 RGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAV 281

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG      +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 282 GYGILKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 329


>gi|29708|emb|CAA30428.1| cathepsin H [Homo sapiens]
          Length = 248

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 118/247 (47%), Gaps = 40/247 (16%)

Query: 150 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           GP P + DWRKK N   P  +Q ACGSCW FS  G                        L
Sbjct: 27  GPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGA-----------------------L 63

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
           E   AI TGK++  ++ QLV+CA+  +  GC G     + EY  +  G+  E  YPY+  
Sbjct: 64  ESAIAIATGKMLSLAEQQLVDCAQDFNNYGCQGGLPSQAFEYILYNKGIMGEDTYPYQGK 123

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFN--GSETMKKILYKYGPLSVL--LNSDLIHDYNGT 321
           +G    C +   K   F  KD  +      E M + +  Y P+S    +  D +    G 
Sbjct: 124 DG---YCKFQPGKAIGFV-KDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGI 179

Query: 322 PIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACG 379
               +  +C  +P  + HAVL VGYG+++ IPYW+V+NSWGP     G+F IERG N CG
Sbjct: 180 ---YSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCG 236

Query: 380 IEQIAGY 386
           +   A Y
Sbjct: 237 LAACASY 243


>gi|345307542|ref|XP_001510786.2| PREDICTED: cathepsin O-like [Ornithorhynchus anatinus]
          Length = 358

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 135/289 (46%), Gaps = 54/289 (18%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE------KDGPVPDAW 156
           YGT++FS   PEE               + +  R K  K+    E      K  P+P  +
Sbjct: 104 YGTNQFSYLFPEEF--------------KAIYLRSKTSKLPRYSESEEMSIKPMPLPVRF 149

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K+V     +Q ACG CWAFSI G+                       +E  YAI+ 
Sbjct: 150 DWRDKHVVTQVRNQEACGGCWAFSIVGE-----------------------IESAYAIRG 186

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKC 272
             L E S  Q+++C+    GC G     ++ + +  Q  L  + +Y +K   G    F  
Sbjct: 187 KPLEELSVQQVIDCSYNNFGCSGGSTINALNWLNKTQVKLVRDAEYSFKAQTGICHYFSG 246

Query: 273 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
           ++    ++ ++  DF   +G E  M K+L  +GPL+V++++    DY G  I+ +   CS
Sbjct: 247 SHYGISIRGYSAYDF---SGQEDEMVKVLLSFGPLAVIVDAVSWQDYLGGIIQHH---CS 300

Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
             +  HAVL+ GY K  ++PYW+VRNSWG      G+  ++ G N CGI
Sbjct: 301 SGEANHAVLITGYDKSGSVPYWIVRNSWGSSWGVNGYAHVKMGANICGI 349


>gi|163658591|gb|ABY28387.1| cathepsin L [Gnathostoma spinigerum]
          Length = 398

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 37/247 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD  DWR  +      DQ  CGSCWAFS                         G LEGQ
Sbjct: 180 IPDTVDWRNSSYVTVVKDQGQCGSCWAFSAT-----------------------GALEGQ 216

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGE 268
           +  KT +LV  S+  LV+C+++   +GC+G   + + EY     G+++E+ YPYK   G+
Sbjct: 217 HMRKTHQLVSLSEQNLVDCSRKYGNNGCNGGLMDNAFEYIKDNHGIDTEESYPYKGVEGK 276

Query: 269 KFKCAYDKSKVKLFTGKDF----LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
             KC +   + K    +D+    L     E +K  +   GP+SV +++  I   N     
Sbjct: 277 --KCHF---RRKFVGAEDYGYTDLPEGDEEALKVAVATIGPISVAIDAGHISFQNYRKGI 331

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNI-PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
             +  CSP DL H VL+VGYG  +N   YW+V+NSWG    + G+ ++ R   N CGI  
Sbjct: 332 YTENECSPEDLDHGVLVVGYGTDENAGDYWIVKNSWGTRWGEHGYIRMARNKRNQCGIAS 391

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 392 KASYPIV 398


>gi|3850787|emb|CAA05360.1| cathepsin S [Mus musculus]
          Length = 330

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 74  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 124

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 125 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 161

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 162 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SK 217

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 218 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 276

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 277 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 330


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 158/360 (43%), Gaps = 58/360 (16%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 97
           + +  SL+    +  E +  +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGH 70

Query: 98  KKHERYGTSEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 154
             +   G ++F+D   EE +   TGF+         V    K  K    +       +P 
Sbjct: 71  FTYA-LGMNQFADLQNEEFVAMMTGFR---------VNGTSKAAKGSTFLPSNNVDKLPK 120

Query: 155 AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI 214
             DWR K    P  DQ  CGSCWAFS  G                        LEGQ   
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGS-----------------------LEGQQFK 157

Query: 215 KTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCA 273
           KTGKLV  S+  LV+C+ +  GC G F + + +Y   A G+++E  Y Y+  +G    C 
Sbjct: 158 KTGKLVSLSEQNLVDCSYRNYGCHGGFMDRAFQYIIDAGGIDTEATYSYRAVDGN---CH 214

Query: 274 YDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCS 331
           + K+ V    TG   +     + ++K +   GP+SV ++ S     +  + +  N+  CS
Sbjct: 215 FKKANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHKFFKFYKSGVY-NEPGCS 273

Query: 332 PYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              LGHAVL+VGYG   D   YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 274 TTRLGHAVLVVGYGTTSDGTDYWIVKNSWAKTWGMNGYLWMSRNKDNQCGIASEASYPMV 333


>gi|129353|sp|P22895.1|P34_SOYBN RecName: Full=P34 probable thiol protease; Flags: Precursor
          Length = 379

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 157/344 (45%), Gaps = 54/344 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGH-----------KKHERYGTSEFSDRSPEEI 116
           F+ +  + GR Y N EE  +R E FK + +               R G ++F+D +P+E 
Sbjct: 44  FQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQE- 102

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
             K   +  +   ++I    +K++K   +   D P P +WDWRKK V      Q  CG  
Sbjct: 103 FSKKYLQAPKDVSQQIKMANKKMKKE--QYSCDHP-PASWDWRKKGVITQVKYQGGCGRG 159

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E  +AI TG LV  S+ +LV+C ++  G
Sbjct: 160 WAFSATG-----------------------AIEAAHAIATGDLVSLSEQELVDCVEESEG 196

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLHFNG-- 292
               +   S E+     G+ ++ DYPY+   G   +C  +K + K+   G + L  +   
Sbjct: 197 SYNGWQYQSFEWVLEHGGIATDDDYPYRAKEG---RCKANKIQDKVTIDGYETLIMSDES 253

Query: 293 --SETMKKILYKY--GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             SET +  L      P+SV +++   H Y G  I   +   SPY + H VLLVGYG  D
Sbjct: 254 TESETEQAFLSAILEQPISVSIDAKDFHLYTGG-IYDGENCTSPYGINHFVLLVGYGSAD 312

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIER--GN--NACGIEQIAGYAT 388
            + YW+ +NSWG    ++G+  I+R  GN    CG+   A Y T
Sbjct: 313 GVDYWIAKNSWGFDWGEDGYIWIQRNTGNLLGVCGMNYFASYPT 356


>gi|11055|emb|CAA45129.1| cysteine proteinase preproenzyme [Homarus americanus]
          Length = 320

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 147/340 (43%), Gaps = 54/340 (15%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPE 114
           ++  F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + E
Sbjct: 18  SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNE 77

Query: 115 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E      G+K   R   + V   E            GP+    DWR K +  P  DQ  C
Sbjct: 78  EFNAVMKGYKKGSRGEPKAVFTAEA-----------GPMAADVDWRTKALVTPVKDQEQC 126

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        LEGQ+ +K  +LV  S+ QLV+C+  
Sbjct: 127 GSCWAFSATG-----------------------ALEGQHFLKNDELVSLSEQQLVDCSTD 163

Query: 234 CS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
               GC G +   + +Y     G+++E  YPY+    E   C +D + +           
Sbjct: 164 YGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEVQ 220

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
           +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +   
Sbjct: 221 HTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTESTK 280

Query: 351 PYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 281 DYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 320


>gi|392873946|gb|AFM85805.1| cathepsin H [Callorhinchus milii]
          Length = 259

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 115/244 (47%), Gaps = 34/244 (13%)

Query: 150 GPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           GP PD  DWR K N   P  +Q  CGSCW FS  G                        L
Sbjct: 38  GPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTG-----------------------CL 74

Query: 209 EGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
           E   AIKTGKL+  ++ QLV+CA   +  GC+G     + EY  +  GLE+EKDYPY   
Sbjct: 75  ESAIAIKTGKLLSLAEQQLVDCAGAYKNHGCNGGLPSQAFEYIKYNGGLEAEKDYPYT-- 132

Query: 266 NGEKFKCAYDKSKVKLFTGK--DFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTP 322
             +   C Y  +K   F  +  +   ++ +  +  +  +  P+S+    +D    Y G  
Sbjct: 133 -AQDQHCQYQPNKAVAFVKEVVNITQYDENGIVDAVA-RLNPVSIAFEVTDDFFQYEGGV 190

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
              ++   +P  + HAVL VGYG Q+   YW+V+NSWGP     G+F I RG N CG+  
Sbjct: 191 YSNSNCDSTPDKVNHAVLAVGYGVQNGTKYWIVKNSWGPEWGLNGYFYIIRGKNMCGLAA 250

Query: 383 IAGY 386
              Y
Sbjct: 251 CPSY 254


>gi|380026170|ref|XP_003696831.1| PREDICTED: cathepsin O-like [Apis florea]
          Length = 368

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 170/392 (43%), Gaps = 68/392 (17%)

Query: 21  VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 79
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++V+  + Y
Sbjct: 3   LLLYCASELCLILDMEWKTIAFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVVRYNKSY 62

Query: 80  AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 120
            ND  E +ERF+ F++              ++   YG +EFSD S +E L  T       
Sbjct: 63  KNDPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSEDEFLLHTLLPDLPI 122

Query: 121 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
            G K     Y R   +  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHKNAPYHRKHQVSTDRMK---------RSISIPSRFDWRDKGVITPVRSQGSCGAC 173

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 233
           WAFS                          ++E  +AIK G L   S  ++++CAK    
Sbjct: 174 WAFSTIE-----------------------VIESMFAIKNGTLHSLSVQEMIDCAKNSNF 210

Query: 234 -CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KVKLFTGKDFL 288
            C G D C    S     +  +  E  YP     G  K     DK+   K++ FT   F+
Sbjct: 211 GCEGGDICSL-LSWLLVSKVQILQESIYPLVGMTGTCKLGKMTDKAFGIKIQDFTCDSFV 269

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +  + +   L  +GP++  +N+    +Y G  I+ + +  S  +L HAV ++GY K  
Sbjct: 270 --DAEDELLIALATHGPVAAAVNALSWQNYLGGVIQYHCDG-SFDNLNHAVQIIGYDKSV 326

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 327 AVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358


>gi|357627452|gb|EHJ77132.1| cathepsin L-like protease [Danaus plexippus]
          Length = 341

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 155/346 (44%), Gaps = 47/346 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 111
           + E +  F ++  +QY ++ E K R + + ++ HK  KH           R  T+++SD 
Sbjct: 23  VREEWNTFKLEHKKQYDSETEEKFRMKIYAENKHKVAKHNQRYQKGLVSYRLKTNKYSDM 82

Query: 112 SPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
              E +    GF  + +  + + A    +         +   P   DWR+     P  DQ
Sbjct: 83  LHHEFVNTMNGFNKTVKHNKGLYAKGNDIRGATFVSPANVAAPPTVDWRQHGAVTPVKDQ 142

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCW+FS                         G LEGQ+  K+G LV  S+  L++C
Sbjct: 143 GKCGSCWSFSTT-----------------------GALEGQHFRKSGFLVSLSEQNLIDC 179

Query: 231 --AKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
             A   +GC+G   + + +Y     G+++EK YPY+  +    KC Y+  K        F
Sbjct: 180 SSAYGNNGCNGGLMDNAFKYIKDNDGIDTEKTYPYEAVDD---KCRYN-PKNSGAEDVGF 235

Query: 288 LHFNGSETMKKI--LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           +     +  K +  L   GP+SV +++        +     DE CS  +L H VL+VGYG
Sbjct: 236 VDIPAGDEHKLMLALATVGPVSVAIDASQESFQLYSDGVYYDENCSSENLDHGVLVVGYG 295

Query: 346 K-QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             +D   YWLV+NSWGP   DEG+ K+ R  +N CGI   A Y  +
Sbjct: 296 TDEDGGDYWLVKNSWGPSWGDEGYIKMARNRDNHCGIASSASYPLV 341


>gi|226476540|emb|CAX72162.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 157/344 (45%), Gaps = 58/344 (16%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGEIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR          Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKHQGL 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV---LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 346
               +T++K +Y+YGP+SV    LNS ++  Y       ND  C   D+ HAVL+VGYG 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALNSLIM--YKSGVFESND--CKYGDINHAVLVVGYGN 286

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +    YWL++NSWG     +G+FK+ R  +N CG+   A +  +
Sbjct: 287 EHGKDYWLIKNSWGDFWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|157862757|gb|ABV90501.1| cathepsin L, partial [Fasciola gigantica]
          Length = 244

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 112/244 (45%), Gaps = 35/244 (14%)

Query: 147 EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPG 206
           + D  VPD  DWR         DQ  CGSCWAFS  G                       
Sbjct: 21  KNDRDVPDRIDWRDSGYVTKVKDQEDCGSCWAFSTTGT---------------------- 58

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKN 264
            +EGQ+    G  V FS+ QLV+C+     +GC G   E + EY  + GLE E  YPY+ 
Sbjct: 59  -MEGQFMKNIGFNVSFSEQQLVDCSSDFGNNGCRGGLMEIAYEYLRRFGLEIESTYPYRA 117

Query: 265 ANGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGT 321
             G    C YD+   V   TG   +H      ++ ++   GP +V L+  SD +   +G 
Sbjct: 118 VEG---PCRYDRRLGVAKVTGYYIVHSGDEVELQNLVGIEGPAAVALDVESDFVMYRSGI 174

Query: 322 PIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
                 +TCSP  L H VL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI
Sbjct: 175 ---YQSQTCSPDRLNHGVLAVGYGTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGI 231

Query: 381 EQIA 384
             +A
Sbjct: 232 ASMA 235


>gi|226476122|emb|CAX72151.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWKLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSKWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C   D+ H VL+VGYG + 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVAVDSLIMYKSGVFESND--CKYGDINHGVLVVGYGNEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|226476108|emb|CAX72144.1| cathepsin L, a [Schistosoma japonicum]
          Length = 331

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 157/342 (45%), Gaps = 54/342 (15%)

Query: 66  ETFKAFIVKRGRQY-ANDEEIKERFEYFK-----QDGHKKHE------RYGTSEFSDRSP 113
           E ++ + +K  + Y +ND+E++ +  + +     Q+ + +H+        G ++F D   
Sbjct: 25  EIWRQWRLKYNKTYTSNDDEMRRKMIFMRRIGKIQEHNLRHDLGLEGYTMGLNQFCDMEW 84

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAA 172
           EE+        +   + ++  +         E+E  + PVP  WDWR         +Q  
Sbjct: 85  EEV--------NRIMFPKVFGNSPLWNDDGNELELTNKPVPSTWDWRDHGAVTAVKNQGM 136

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EGQ   K  KL+  S+ QLV+C+ 
Sbjct: 137 CGSCWAFSATGA-----------------------IEGQLRRKHKKLISLSEQQLVDCST 173

Query: 233 QCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LH 289
                GC+G + + +  Y     +ESE DY Y    G    C Y KSK  +   K   L 
Sbjct: 174 PYGNYGCEGGYMDHAFNYLESHYIESENDYKYL---GYDANCHYRKSKGVVKVKKFVDLP 230

Query: 290 FNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
               +T++K +Y+YGP+SV ++  D +  Y       ND  C    + H VL+VGYGK+ 
Sbjct: 231 SKDEKTLQKAVYQYGPISVGIVALDSLIMYKSGVFESND--CKYAGINHGVLVVGYGKEH 288

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              YWL++NSWG +   +G+FK+ R  +N CG+   A +  +
Sbjct: 289 GKDYWLIKNSWGDLWGSKGYFKLRRNKHNMCGVASNASFPLL 330


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/255 (32%), Positives = 117/255 (45%), Gaps = 36/255 (14%)

Query: 145 EVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIF 204
            V     +PD  DWR K    P  +Q  CGSCWAFS  G                     
Sbjct: 101 HVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGS-------------------- 140

Query: 205 PGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYP 261
              LEGQ  +K G L   S+ QLV+C+ +    GC G   + + +Y     G++SE  YP
Sbjct: 141 ---LEGQTFLKKGTLPSLSEQQLVDCSDKYGNHGCQGGLMDNAFKYIEANGGIDSEASYP 197

Query: 262 YKNANGEKFKCAYDKSKVKLF-TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNG 320
           Y+  NG   KC + +S V    TG   +  +  + ++  +   GP+SV +++        
Sbjct: 198 YEAKNG---KCRFQQSAVAATCTGYKDIPHDDIDGLQDAVANVGPISVAMDASHSSFQLY 254

Query: 321 TPIRKNDETCSPYDLGHAVLLVGYGKQ------DNIPYWLVRNSWGPIGPDEGFFKIERG 374
                +   CS   L H VL VGYG +      +  PYWLV+NSWGP    +G+FKI R 
Sbjct: 255 AAGVYDPLLCSSTRLDHGVLAVGYGTEPSGLFHEEKPYWLVKNSWGPDWGQQGYFKIVRK 314

Query: 375 NNACGIEQIAGYATI 389
           +N CGI   A Y T+
Sbjct: 315 DNKCGIATDASYPTV 329


>gi|332249835|ref|XP_003274061.1| PREDICTED: cathepsin W [Nomascus leucogenys]
          Length = 403

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 152/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 67  EAFKLFQIQFNRSYLSPEEHARRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 126

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 127 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 179

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C++   
Sbjct: 180 CWAMAAAGN-----------------------IEALWRINFWDFVDVSVQELLDCSRCGD 216

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+    SE
Sbjct: 217 GCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNSE 274

Query: 295 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 275 HRIAQYLATYGPITVTINMKPLQLYRKGVIKATSTTCDPQLVDHSVLLVGFGSVKSEEGI 334

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 335 WAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 390


>gi|8393221|ref|NP_059016.1| cathepsin S preproprotein [Rattus norvegicus]
 gi|399190|sp|Q02765.1|CATS_RAT RecName: Full=Cathepsin S; Flags: Precursor
 gi|203650|gb|AAA40994.1| cathepsin S precursor [Rattus norvegicus]
          Length = 330

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 133/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G +   D +PEE++   G     R + R    +    + L         PD+ DWR+K  
Sbjct: 74  GMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQTL---------PDSVDWREKGC 124

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CGSCWAFS  G                        LEGQ  +KTGKLV  S
Sbjct: 125 VTNVKYQGSCGSCWAFSAEGA-----------------------LEGQLKLKTGKLVSLS 161

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD-KSK 278
              LV+C+ +      GC G F   + +Y     ++SE  YPYK  +    KC YD K++
Sbjct: 162 AQNLVDCSTEEKYGNKGCGGGFMTEAFQYIIDTSIDSEASYPYKAMDE---KCLYDPKNR 218

Query: 279 VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD--YNGTPIRKNDETCSPYDLG 336
               +    L F   E +K+ +   GP+SV ++ D  H   +       +D +C+  ++ 
Sbjct: 219 AATCSRYIELPFGDEEALKEAVATKGPVSVGID-DASHSSFFLYQSGVYDDPSCTE-NMN 276

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 277 HGVLVVGYGTLDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCSYPEI 330


>gi|351694420|gb|EHA97338.1| Cathepsin K [Heterocephalus glaber]
          Length = 329

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 29/244 (11%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G                        L
Sbjct: 112 EGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------AL 148

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANG 267
           EGQ   KTGKL+  S   LV+C  +  GC G +   + +Y  Q  G++SE  YPY    G
Sbjct: 149 EGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQQNRGIDSEDAYPYV---G 205

Query: 268 EKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           +   C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     
Sbjct: 206 QDESCMYNPTGKAAKCRGYREVPVGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYY 265

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
           DE+C   +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NN CGI  +A 
Sbjct: 266 DESCDGDNLNHAVLAVGYGIQRGHKHWILKNSWGENWGNKGYVLLARNKNNTCGIANLAS 325

Query: 386 YATI 389
           +  +
Sbjct: 326 FPKM 329


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 147/336 (43%), Gaps = 47/336 (13%)

Query: 68  FKAFIVKRGRQYAN-DEEIKERFEYFKQ-DGHKKHERYGTS------EFSDRSPEEILCK 119
           F ++    G  YA   EE   R  Y    D  +KH   G S      +F+D +  E   K
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGHSYKLAVNKFADLTYPEFAAK 81

Query: 120 -TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
             G ++      +  A    + +M+        +PD+ DWR   +  P  DQ  CGSCW+
Sbjct: 82  YLGLRFDATNATKSFAASTYLPRMV-------SLPDSVDWRTAGIVTPIKDQGQCGSCWS 134

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCSG 236
           FS  G                        +EGQ+A KTG+LV  S+  LV+C  A+  +G
Sbjct: 135 FSTTGS-----------------------VEGQHARKTGQLVSLSEQNLVDCSSAQGNAG 171

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           C+G   + + +Y     G+++E  YPY   +G    C ++ + V           +GSE+
Sbjct: 172 CNGGLMDQAFQYIISNNGIDTESSYPYTAQDG---TCQFNSANVGATVASYQDIASGSES 228

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            ++  +   GP+SV +++        +    N+  CS   L H VL VGYG   +  YWL
Sbjct: 229 DLQNAVATVGPISVAIDASQPSFQFYSSGVYNEPACSSSQLDHGVLAVGYGTSGSSDYWL 288

Query: 355 VRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           V+NSWG      G+  + R  NN CGI   A Y  +
Sbjct: 289 VKNSWGTSWGQSGYIWMTRNSNNQCGIATAASYPLV 324


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 156/343 (45%), Gaps = 67/343 (19%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQDGHKKHERY-------------GTSEFSDRSPEEIL 117
           F  K  + Y+ DE+I  R  Y  Q   +K E +             G ++++D + EE  
Sbjct: 25  FKAKHNKTYSGDEDIIRR--YIWQTNLQKIEAHNELYAKGLSTYFLGENKYADMTNEEF- 81

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                    RT   +  D+E      +       +P A DWRK+       DQ  CGSCW
Sbjct: 82  --------RRTLSGLRVDKELTPGDFVSGMFKDSLPTAVDWRKEGYVTEVKDQGQCGSCW 133

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-- 235
           AFS  G                        LEGQ+   T +LV  S+S LV+C+K+    
Sbjct: 134 AFSTTGS-----------------------LEGQHFKATKQLVSLSESNLVDCSKKWGNQ 170

Query: 236 GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKV----KLFTGKDFLHF 290
           GC+G   + + +Y     G+++EK YPYK    E  KC + K+ V    KL+  KD    
Sbjct: 171 GCNGGLMDNAFKYIADNKGIDTEKSYPYKP---EDRKCNFKKANVGATDKLY--KDIT-- 223

Query: 291 NGSE-TMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +GSE  +++ +   GP+SV +++  D    Y+G     N++ CS   L H VL VGY  +
Sbjct: 224 SGSEDALQEAVATIGPISVAIDASHDSFQLYSGGVY--NEKACSTKTLDHGVLAVGYDSK 281

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +   YW+V+NSWG     +G+  + R   N CGI  +A Y  +
Sbjct: 282 NGDDYWIVKNSWGKSWGIDGYIWMSRNKKNQCGIATMASYPVV 324


>gi|449461649|ref|XP_004148554.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD19a-like
           [Cucumis sativus]
          Length = 381

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 151/345 (43%), Gaps = 73/345 (21%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY------GTSEFSDRSPEEILCK 119
           F  F  + G+ YA +EE   RF+ FK +  +  +H+ +      G ++FSD +P E   +
Sbjct: 59  FSLFKRRFGKSYATEEEHDRRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEF--R 116

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
             F        R+  D      +  E      +P  +DWR+        +Q +CGSCW+F
Sbjct: 117 KAFLGLRGHRLRLPVDTNAAPILPTE-----NLPIDFDWRQHGGVTRVKNQGSCGSCWSF 171

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC----- 234
           S  G                             A++    +  S+ QLV+C  +C     
Sbjct: 172 STTG-----------------------------ALEGANFLXLSEQQLVDCDHECDPEEE 202

Query: 235 ----SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTGK-DFL 288
               SGC+G     + EYT +AG L  E+DYPY  A  ++  C +DKSK+         +
Sbjct: 203 DACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPY--AGIDRNTCNFDKSKIAASIASFSVV 260

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYG 345
           +    + +   L K GPL++ +N+  +  Y G    P       CS   L H VLLVGYG
Sbjct: 261 NSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPF-----ICSKR-LDHGVLLVGYG 314

Query: 346 KQDNIP-------YWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
                P       YW+++NSWG    + G++KI RG N CG++ +
Sbjct: 315 SAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSL 359


>gi|121531600|gb|ABM55485.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 152/341 (44%), Gaps = 60/341 (17%)

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 117
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCS 235
           AFS                         G LEGQ AI     +  S+ QL++C  A    
Sbjct: 136 AFSAT-----------------------GALEGQNAILNNVKISLSEQQLLDCSAAYGNG 172

Query: 236 GC-DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            C +G     + EY    G++SEK YPY     E   C YD SK  +   K + +   SE
Sbjct: 173 NCKEGGDMSAAFEYVRDYGIQSEKSYPYIRKQTE---CQYDASKT-ILKIKGYKNVTTSE 228

Query: 295 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             ++K +   GP+S+ +NSD +  Y    I  + + CS +DL H VL+VGYGK       
Sbjct: 229 EGLRKAVGAIGPISIAMNSDPLQLYYSGII--SGKGCS-HDLDHGVLVVGYGKASQWSGE 285

Query: 350 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
             +W V+NSWG I  + G+F+I+R  NN CGI     Y  +
Sbjct: 286 TKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDPTYPVL 326


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 57/360 (15%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTS-- 106
           A+  +     E +   + AF    G++Y ++ E   R + + ++     + +E+Y  +  
Sbjct: 13  AMTAAAITHQELVGAEWSAFKALHGKEYQSETEEYYRLKIYMENRMMIARHNEKYANNKV 72

Query: 107 -------EFSDRSPEEIL-CKTGFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDA 155
                  E+ D    E +  + GF+   R+  R      + E +E        D  +P  
Sbjct: 73  SYKLAMNEYGDMLHHEFVSTRNGFRRDYRSKPRQGSFYIEPEGIE--------DKHLPKT 124

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWRKK    P  +Q  CGSCWAFS  G                        LEGQ+  K
Sbjct: 125 VDWRKKGAVTPVKNQGQCGSCWAFSTTGS-----------------------LEGQHFRK 161

Query: 216 TGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKC 272
           +G +V  S+  LV+C+     +GC+G   + + +Y     G+++EK YPY   NG    C
Sbjct: 162 SGDMVSLSEQNLVDCSTAFGNNGCEGGLMDNAFKYIKANGGIDTEKSYPY---NGTDGTC 218

Query: 273 AYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            + KS V   T   F+    G+E  +KK +   GP+SV +++        +    ++  C
Sbjct: 219 HFKKSDVGA-TDTGFVDIPEGNEHLLKKAVATVGPISVAIDASHQSFQFYSQGVYDEPEC 277

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           S  +L H VL+VGYG +D+  YWLV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 278 SSENLDHGVLVVGYGTKDDQDYWLVKNSWGTTWGDGGYIYMTRNKDNQCGIASSASYPLV 337


>gi|301767944|ref|XP_002919404.1| PREDICTED: cathepsin K-like [Ailuropoda melanoleuca]
 gi|281352889|gb|EFB28473.1| hypothetical protein PANDA_008011 [Ailuropoda melanoleuca]
          Length = 330

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 153/345 (44%), Gaps = 51/345 (14%)

Query: 62  ENILET-FKAFIVKRGRQYAND-EEIKERFEYFKQDGHKKHERYGTS-----------EF 108
           E IL+T ++ +    G+QY +  +EI  R  + K   H        S             
Sbjct: 20  EEILDTQWELWKKTYGKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHL 79

Query: 109 SDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
            D + EE++ K TG K        +     +    L   + +   PD+ D+RKK    P 
Sbjct: 80  GDMTSEEVVQKMTGLK--------VPPSHSRNNDTLYIPDWESRAPDSIDYRKKGYVTPV 131

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S   L
Sbjct: 132 KNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSPQNL 168

Query: 228 VECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTGK 285
           V+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K     G 
Sbjct: 169 VDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQDESCMYNPTGKAAKCRGY 225

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +     + +K+ + + GP+SV +++ L      +     DE C+  +L HAVL VGYG
Sbjct: 226 REIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYG 285

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 286 IQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 330


>gi|71084306|gb|AAZ23598.1| cysteine protease [Leishmania major]
          Length = 327

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 149/350 (42%), Gaps = 54/350 (15%)

Query: 57  LTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-E 107
           L  DN      +  F  + G+ +  D +   RF  FKQ+         H  H  Y  S +
Sbjct: 4   LGVDNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGK 63

Query: 108 FSDRSPEEI----LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           F+D +P+E     L    +    + Y+  V   + V    M V          DWR+K  
Sbjct: 64  FADLTPQEFAKLYLNPDYYARRGKDYKEHVHVDDSVLSGAMSV----------DWREKVA 113

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P  +Q  CGSCWAFS  G                        +E Q+A+K   LV  S
Sbjct: 114 VTPVKNQGMCGSCWAFSAIGN-----------------------IESQWALKNHSLVSLS 150

Query: 224 KSQLVECAKQCSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
           +  LV C     GC+G   + ++E+    H   + +E+ YPY +A G    C +DK +  
Sbjct: 151 EQMLVSCDDIDDGCNGGLMDQAMEWIIQHHNGTVPTEESYPYASAGGTSPPC-HDKGEFG 209

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
                     +  + +   + K GP++V +++     Y G  +      C  + L H VL
Sbjct: 210 ARISGYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQLYFGGVVT----LCFGWSLNHGVL 265

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           +VG+ K+   PYW+V+NSWG    ++G+ ++  G+N C ++     AT+D
Sbjct: 266 VVGFNKRAKPPYWIVKNSWGTSWGEKGYIRLAMGSNQCLLKNYPVTATVD 315


>gi|301612003|ref|XP_002935514.1| PREDICTED: cathepsin K-like [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 139/292 (47%), Gaps = 42/292 (14%)

Query: 104 GTSEFSDRSPEEIL-CKTGFK-WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
           G ++F D + EE++   TG K  +      + +D         E E    +P++ D+RKK
Sbjct: 76  GMNKFGDMTSEEVVRMMTGLKVHTGMGPTNLTSD---------EDEASQRIPNSIDYRKK 126

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  DQ  CGSCWAFS  G                        LEGQ   KTGKLV 
Sbjct: 127 GYVTPIRDQGECGSCWAFSTVG-----------------------ALEGQLMKKTGKLVG 163

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S   LV+C K   GC G +   + +Y  +  G++SE+ YPY    G   KC Y+ S  +
Sbjct: 164 ISPQNLVDCVKDNFGCGGGYMTTAFKYVKKNKGIDSEEAYPYV---GMDQKCKYNVSG-R 219

Query: 281 LFTGKDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
               K F     GSET +KK +   GP+SV +++ L   +        D++C    + HA
Sbjct: 220 AAEIKGFKEVKKGSETALKKAVGLVGPISVGIDAGLDTFFLYKKGIYYDKSCDGDSINHA 279

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           VL VGYGKQ    YW+++NSWG    ++G+  + R   NACGI  +A Y  +
Sbjct: 280 VLAVGYGKQKKGKYWIIKNSWGEDWGNKGYILMAREKGNACGIANLASYPVM 331


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 57/352 (16%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 109
           E + E + AF ++  + Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 21  ELVKEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYA 80

Query: 110 DRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPA 167
           D   EE +    GF    RT  +      ++E+ +  +E  +  VP   DWRKK    P 
Sbjct: 81  DLLHEEFVQTVNGFN---RTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPV 137

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCW+FS                         G LEGQ+  KTGKLV  S+  L
Sbjct: 138 KDQGHCGSCWSFSAT-----------------------GALEGQHFRKTGKLVSLSEQNL 174

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN-----GEKFKCAYDKSKV 279
           V+C+ +   +GC+G   + + +Y     G+++EK YPY+  +       K   A DK  V
Sbjct: 175 VDCSGKYGNNGCNGGMMDYAFQYIKDNGGIDTEKSYPYEAIDDTCHFNPKAVGATDKGYV 234

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
            +  G +       E +KK L   GP+S+ +++        +     +  C   +L H V
Sbjct: 235 DIPQGDE-------EALKKALATVGPVSIAIDASHESFQFYSEGVYYEPQCDSENLDHGV 287

Query: 340 LLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           L VGYG  ++   YWLV+NSWG    D+G+ K+ R  +N CG+   A Y  +
Sbjct: 288 LAVGYGTSEEGEDYWLVKNSWGTTWGDQGYVKMARNHDNHCGVATCASYPLV 339


>gi|443708542|gb|ELU03619.1| hypothetical protein CAPTEDRAFT_17807 [Capitella teleta]
          Length = 350

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 159/367 (43%), Gaps = 63/367 (17%)

Query: 48  VDTLAIEGSLTFDN----ENILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGH 97
            + L  + +L F N    E + + FK       R Y   EE  +R E F+      Q  +
Sbjct: 22  TNILRPDTTLRFPNLVPFEKLWQDFKTV---HERTYGETEE-SQRKEVFRNNLKKIQAHN 77

Query: 98  KKHE------RYGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
             HE      R G ++F+D    E      GF+ + RT       R+ +    +      
Sbjct: 78  HLHEQGKSPYRMGINQFADMEANEFASIMNGFRMNNRT-----EVRDHLHANYISPAIPV 132

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
            VP   DWRK+    P  +Q  CGSCWAFS  G                        LEG
Sbjct: 133 SVPAEVDWRKEGYVTPVKNQGQCGSCWAFSTTGS-----------------------LEG 169

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG 267
           Q+  KTGKLV  S+  LV+C+      GC+G   + + +Y     G ++E  YPY+  +G
Sbjct: 170 QHFRKTGKLVSLSEQNLVDCSTSYGNEGCNGGIVDYAFQYIKDNDGDDTEACYPYEAVDG 229

Query: 268 EKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLN---SDLIHDYNGTPI 323
               C +    V    TG   L       MK+ +   GP+SV ++   S      +G  +
Sbjct: 230 ---TCRFKSVCVGATCTGYTDLPKGDEAKMKEAVALVGPVSVAIDASHSSFQMYQSGIYV 286

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
              ++ CSP  L HAVL+VGYG +    YWLV+NSWG    DEG+ K+ R  +N CGI  
Sbjct: 287 ---EQECSPKQLDHAVLVVGYGTEQGQDYWLVKNSWGTTWGDEGYIKMARNMDNQCGIAS 343

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 344 QASYPLV 350


>gi|414589597|tpg|DAA40168.1| TPA: hypothetical protein ZEAMMB73_868349 [Zea mays]
          Length = 252

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 115/243 (47%), Gaps = 31/243 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P+  DWR+  +  P  +Q  CGSCW FS  G                        LE  
Sbjct: 35  MPETKDWREDGIVSPVKNQGHCGSCWTFSTTGA-----------------------LEAA 71

Query: 212 YAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
           Y   TGK +  S+ QLV+C  A    GC G     + EY  +  GL++E+ YPY+  NG 
Sbjct: 72  YTQATGKAISLSEQQLVDCGFAFNNFGCKGGLPSQAFEYIKYNGGLDTEESYPYQGVNGI 131

Query: 269 -KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
            +FK   +   VK+    + +     + +K  +    P+SV            T +  +D
Sbjct: 132 CQFKA--ENVGVKVLDSVN-ITLGAEDELKDAVGLVRPVSVAFEVISGFRLYKTGVYTSD 188

Query: 328 ET-CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
               +P D+ HAVL VGYG ++ +PYWL++NSWG    DEG+FK+E G N CG+   A Y
Sbjct: 189 HCGTTPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASY 248

Query: 387 ATI 389
             +
Sbjct: 249 PVV 251


>gi|300121328|emb|CBK21708.2| unnamed protein product [Blastocystis hominis]
          Length = 318

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 142/320 (44%), Gaps = 56/320 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F +++ K G+ YA  EE + R   F  +  K  E          G ++F+D S EE    
Sbjct: 22  FTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADVSAEEF--- 78

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
                    Y+     ++   +   +    G VP   DWR++    P  +Q  CGSCWAF
Sbjct: 79  --------AYKFCGCAKDPKTRGTRQTTLVGDVPARVDWREQGAVTPVKNQGMCGSCWAF 130

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS---- 235
           S                         G  EG Y +KTG LV  S+ QLV+CA+       
Sbjct: 131 STT-----------------------GTTEGAYFLKTGNLVSLSEQQLVDCARDPEYENF 167

Query: 236 GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           GC G +   +++Y  + GL +E+DYPYK  + E   C     KV + +        G E 
Sbjct: 168 GCSGGWPWSAVDYVTKHGLCTEEDYPYKGVDAE---CKESSCKVAVQSVDKVQLPVGDED 224

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK--QDNIPYW 353
              +     P+S++L++  +  Y+   I +  E+     + HAVL VGY K  +  + YW
Sbjct: 225 SLAVAVSKTPVSIVLDATAMQLYDKGIITRCSES-----INHAVLAVGYDKDAETGLKYW 279

Query: 354 LVRNSWGPIGPDEGFFKIER 373
           +++NSWG    +EG+ +IE+
Sbjct: 280 IIKNSWGADWGEEGYCRIEK 299


>gi|157862755|gb|ABV90500.1| cathepsin L, partial [Fasciola gigantica]
          Length = 251

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 112/241 (46%), Gaps = 31/241 (12%)

Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
           K+  VP + DWR+        DQ  CGSCWAFS  G                        
Sbjct: 29  KNRAVPTSIDWRESGYVTEVKDQGGCGSCWAFSTTGA----------------------- 65

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNA 265
           +EGQY       + FS+ QLV+C+      GC G   E + EY    GLE+E  YPY+  
Sbjct: 66  MEGQYMKSQRINISFSEQQLVDCSGDFGNHGCSGGLMEKAYEYLRHFGLETESSYPYRAD 125

Query: 266 NGEKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
            G    C YDK   V   +    +H      +K ++   GP +V L+ ++      + I 
Sbjct: 126 EG---PCQYDKQLGVAQLSDYYIVHSQDEVALKNLIGVEGPAAVALDVNIDFMMYKSGIY 182

Query: 325 KNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQI 383
           + DE CS   L HA+L VGYG +D   YW+V+NSWG    + G+ ++ R  +N CGI  +
Sbjct: 183 Q-DEICSSRYLNHALLAVGYGTEDGTEYWIVKNSWGSRWGEHGYIRLARNRDNMCGIATL 241

Query: 384 A 384
           A
Sbjct: 242 A 242


>gi|1272388|gb|AAB17051.1| cysteine protease, partial [Spirometra mansonoides]
          Length = 216

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 36/245 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD+ +W +K       +Q  CGSCW+FS  G                        +EG 
Sbjct: 1   LPDSVNWHEKGAVTSVKNQGQCGSCWSFSANGA-----------------------IEGA 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
             IK G L   S+ QLV+C+ +    GC+G F   + +Y  + G+E+E DY Y   +G  
Sbjct: 38  IQIKMGILPTLSEQQLVDCSWEYGNQGCNGGFMSLAFQYAQRYGVEAEVDYRYTAKDG-- 95

Query: 270 FKCAYDKSKVKL-FTGKDFLHFNGSETMKKILYKYGPLSVLLNSD---LIHDYNGTPIRK 325
             C Y +  V    TG   L      ++++ +   GP+SV ++++    +   +G  + K
Sbjct: 96  -FCRYQQDMVVANVTGYAELPQGDEASLQRAVAVIGPISVGIDANDPGFMSYSHGVFVSK 154

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
              TCSP D+ H VL++GYG +++ PYWLV+NSWG    ++G+ K+ R  NN CGI  +A
Sbjct: 155 ---TCSPDDINHGVLVIGYGTENDEPYWLVKNSWGRSWGEQGYVKMARNKNNMCGIASVA 211

Query: 385 GYATI 389
            Y T+
Sbjct: 212 SYPTV 216


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 168/357 (47%), Gaps = 58/357 (16%)

Query: 45  VARVDTLA-IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHK 98
           V R D +   E      ++ +L+ F  ++ +  R Y +  E + RF+ FK +      H 
Sbjct: 28  VGRADAIMDYEAHELHSDDGMLDVFHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHN 87

Query: 99  KHER---YGTSEFSDRSPEEILC-KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 154
           K E+    G ++FSD + +E      G + + R +     DR   E ++ E        +
Sbjct: 88  KQEKSYWLGLNKFSDLTHDEFRALYLGIRPAGRAHGLRNGDRFIYEDVVAE--------E 139

Query: 155 AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI 214
             DWRKK       DQ +CGSCWAFS  G                        +EG  AI
Sbjct: 140 MVDWRKKGAVSDVKDQGSCGSCWAFSAIGS-----------------------VEGVNAI 176

Query: 215 KTGKLVEFSKSQLVECAK-QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKC 272
            TG+L+  S+ +LV+C + Q  GC+G   + + ++     G+++E+DYPYK  +G+  + 
Sbjct: 177 VTGELISLSEQELVDCDRGQNQGCNGGLMDYAFDFIIKNGGIDTEEDYPYKATDGQCDEA 236

Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDET 329
             + SKV +      +      ++ K + K  P+SV + +   D  H Y G        T
Sbjct: 237 RKETSKVVVIDDYQDVPTKSESSLLKAVSK-NPVSVAIEAGGRDFQH-YQGGVFTGPCGT 294

Query: 330 CSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIER-GNNA----CGI 380
               DL H VL VGYG  D+ + YW+V+NSWGP   ++G+ ++ER G+N+    CGI
Sbjct: 295 ----DLDHGVLAVGYGTDDDGVNYWIVKNSWGPSWGEKGYIRMERMGSNSTSGKCGI 347


>gi|168057475|ref|XP_001780740.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667829|gb|EDQ54449.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 164/354 (46%), Gaps = 63/354 (17%)

Query: 54  EGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHER---YGT 105
           EG+    ++ IL+ F  ++    R Y +  E   RF+ FK++      H K ++    G 
Sbjct: 35  EGNQLHSDDAILDVFHQWLETHSRVYRSLSEKHHRFQIFKENFLYIHAHNKQQKSYWLGL 94

Query: 106 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           ++FSD + +E      F+      + +   R++   M  +VE +  V    DWR K    
Sbjct: 95  NKFSDLTHQE------FRAQYLGTKPVNRQRKEANFMYEDVEAEPKV----DWRLKGAVT 144

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
              DQ ACGSCWAFS  G                        +EG  AIKTG+LV  S+ 
Sbjct: 145 DVKDQGACGSCWAFSAVGS-----------------------VEGVNAIKTGELVSLSEQ 181

Query: 226 QLVEC-AKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           +LV+C  KQ  GC+G   + + E+     G+++EKDYPYK  +G   +C   +   K+  
Sbjct: 182 ELVDCDRKQNQGCNGGLMDYAFEFIIKNGGIDTEKDYPYKARDG---RCDEGRRNSKVVV 238

Query: 284 GKDF--LHFNGSETMKKILYKYGPLSVLLNS---DLIHDYNGTPIRKNDETCSPYDLGHA 338
             D+  +       + K L K  P+SV + +   D  H Y G         C   +L H 
Sbjct: 239 IDDYQDVPTQSESALMKALTK-NPVSVAIEAGGRDFQH-YQGGVFTG---PCGS-ELDHG 292

Query: 339 VLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGY 386
           VL VGYG  D+ + YW+V+NSWGP   ++G+ ++ER      +  CGI   A +
Sbjct: 293 VLAVGYGTDDDGVNYWIVKNSWGPGWGEKGYIRMERFGSDSTDGKCGINIEASF 346


>gi|403223173|dbj|BAM41304.1| cysteine protease precursor TacP [Theileria orientalis strain
           Shintoku]
          Length = 463

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 66/382 (17%)

Query: 32  CLPSLTDRITDQVVARVDTLAIEGSLTFDNEN---ILETFKAFIVKRGRQYANDEEIKER 88
             PS+ +++T+  V  + +L     +++D+      L +F+ F     + +A D+E +ER
Sbjct: 106 SFPSIDEKLTEAYVKELSSLYERREISYDHVKEFEALRSFEKFKADYNKVHATDDERRER 165

Query: 89  FEYFKQD-----GHKKHERYGTSE--FSDRSPEE-------ILCKTGFKWSERTYERIVA 134
           F  F+ +      HK HE +  S   FSD + EE       I        SE   ER+++
Sbjct: 166 FLVFRNNYLETLTHKGHETFTKSVNFFSDLTEEELNRLFPKIEVPKESSPSEH-LERLMS 224

Query: 135 DREKVEKMLMEV-----------EKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
            R      L ++             DG   ++ DWRK N      DQ  CGSCWAF+  G
Sbjct: 225 SRSTDPNFLAKLALAKGFQSPVKSLDGISGESIDWRKANGVTKVKDQGMCGSCWAFASVG 284

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFE 243
                                   +E  Y I T K+++ S+ +LV C  +  GC+G F +
Sbjct: 285 S-----------------------VESLYKIHTDKVLDLSEQELVNCETKSHGCEGGFGD 321

Query: 244 PSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 303
            ++EY    G+ S  D PY   +    +    K+  K+F    F+   G + M K L   
Sbjct: 322 TALEYVKNKGISSSADVPYHAMD----QTCDIKTHDKVFINS-FMVTKGKDVMNKSLVLS 376

Query: 304 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--PYWLVRNSWGP 361
             +  +  S  +  Y        +  C+  +L HAVLLVG G  D +   YW+++NSWGP
Sbjct: 377 PTVVYIAASSELMMYKAGVF---NGACAK-ELNHAVLLVGEGYDDIVGKRYWVIKNSWGP 432

Query: 362 IGPDEGFFKIER---GNNACGI 380
              ++G+ ++ER   G + CG+
Sbjct: 433 HWGEDGYVRLERTDKGTDKCGV 454


>gi|343475823|emb|CCD12886.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 47/334 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSP 113
           +++ + F AF  K  R Y +  E   RF  FKQ+  +  E         +G + FSD SP
Sbjct: 35  QSLQQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSP 94

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE      F+ +        A   K  + ++ V    P P   DWRKK    P  DQ  C
Sbjct: 95  EE------FRATYHNGAEYYAAALKRPRKVVNVSTGRP-PMTVDWRKKGAVTPVKDQGKC 147

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            S WAFS  G                        +EGQ+ I   +L   S+  LV C   
Sbjct: 148 DSSWAFSAIGN-----------------------IEGQWKIAGHELTSLSEQMLVSCDTN 184

Query: 234 CSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKDFLH 289
             GC+    +P+ ++   +++  + +E+ YPY +  G    C      V    +   +L 
Sbjct: 185 DLGCELGLKDPAFQWILWSNKGNVFTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYLP 244

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            +  +T+ + L + GP+++ +++     Y G  +     +C    L +  LLVGY     
Sbjct: 245 LD-EDTIAEWLARKGPVAIAVDATSFQRYTGGVL----TSCISRRLNYGALLVGYDDTSK 299

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
            PYW+++NSWG    +EG+ +IE+G N C ++ +
Sbjct: 300 PPYWIIKNSWGKGWGEEGYIRIEKGTNQCLVKNL 333


>gi|327273973|ref|XP_003221753.1| PREDICTED: cathepsin O-like [Anolis carolinensis]
          Length = 376

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 44/292 (15%)

Query: 95  DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEV---EKDGP 151
           +G      YG ++FS   PEE             Y  + +   KV K   EV   E D P
Sbjct: 114 NGDNTTAFYGMNQFSHLFPEEF---------RAIY--LQSKSSKVPKFTPEVRVEEIDKP 162

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P  +DWR K +     +Q  CG CWAFS+ G                       ++E  
Sbjct: 163 LPAKFDWRDKGIVTKVRNQGVCGGCWAFSVVG-----------------------IIESV 199

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK 271
           +AIK   L E S  Q+++C+   SGC G     ++ + +Q  ++  +D  Y +   E   
Sbjct: 200 HAIKRNVLEELSVQQVIDCSYINSGCRGGSPVGALGWINQTRVKLVRDSEY-HFQAETGL 258

Query: 272 CAYDKSKVKLFTGKDFLHFNGSET---MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
           C Y        + K +  ++ S+    MKK+L ++GPL+V++++    DY G  I+ +  
Sbjct: 259 CRYFSRADFGVSIKGYAAYDLSDQEDKMKKLLLEWGPLAVVVDAASWQDYLGGIIQYH-- 316

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            CS  +  HAVL+ GY    +IP+W+V+NSWGP    +G+ +I+ G+N CGI
Sbjct: 317 -CSSGEPNHAVLITGYDTTGSIPFWIVKNSWGPAWGIDGYVRIKIGSNVCGI 367


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 156/344 (45%), Gaps = 46/344 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 111
           I E +  + ++  + YAN+ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 24  IKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADM 83

Query: 112 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
              E   K        T  +++ +R  +            VP + DWR+        DQ 
Sbjct: 84  LHHEF--KETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQG 141

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAFS                         G LEGQ+  K G LV  S+  LV+C+
Sbjct: 142 HCGSCWAFSST-----------------------GALEGQHFRKAGVLVSLSEQNLVDCS 178

Query: 232 KQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKDF 287
            +   +GC+G   + +  Y     G+++EK YPY+   G    C ++K+ +    TG   
Sbjct: 179 TKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---GIDDSCHFNKATIGATDTGFVD 235

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           +     E MKK +   GP+SV +++        +    N+  C   +L H VL+VGYG  
Sbjct: 236 IPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTD 295

Query: 348 DN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           ++ + YWLV+NSWG    ++G+ K+ R  NN CGI   + Y T+
Sbjct: 296 ESGMDYWLVKNSWGTTWGEQGYIKMARNQNNQCGIATASSYPTV 339


>gi|75765285|pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abe854
 gi|75765286|pdb|1U9W|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abi491
 gi|75765287|pdb|1U9X|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor Nvp-Abj688
 gi|160286063|pdb|2R6N|A Chain A, Crystal Structure Of A Pyrrolopyrimidine Inhibitor In
           Complex With Human Cathepsin K
          Length = 217

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 120/243 (49%), Gaps = 29/243 (11%)

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
           G  PD+ D+RKK    P  +Q  CGSCWAFS  G                        LE
Sbjct: 1   GRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------ALE 37

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE 268
           GQ   KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+
Sbjct: 38  GQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQ 94

Query: 269 KFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
           +  C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     D
Sbjct: 95  EESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYD 154

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
           E+C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +
Sbjct: 155 ESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASF 214

Query: 387 ATI 389
             +
Sbjct: 215 PKM 217


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 155/339 (45%), Gaps = 55/339 (16%)

Query: 71  FIVKRGRQYANDEEIKERFEYFKQDGHKKHE----------RYGTSEFSDRSPEEILCK- 119
           ++ + GR YA+  E   R+  FK++  +             +   ++F+D + EE     
Sbjct: 41  WMTEHGRVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMY 100

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
           TGFK +      +++ R K      +      +P + DWRKK    P  DQ  CGSCWAF
Sbjct: 101 TGFKGNS-----VLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAF 155

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S                           +EG   IK GKL+  S+ +LV+C     GC G
Sbjct: 156 SAV-----------------------AAIEGVAQIKKGKLISLSEQELVDCDTNDGGCMG 192

Query: 240 CFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETM 296
              + +  YT    GL SE +YPYK+ NG    C ++K+K    + K F  +  N  + +
Sbjct: 193 GLMDTAFNYTITIGGLTSESNYPYKSTNGT---CNFNKTKQIATSIKGFEDVPANDEKAL 249

Query: 297 KKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWL 354
            K +  + P+S+ +   D+   +  + +   +  C+ + L H V  VGYG+  N + YW+
Sbjct: 250 MKAVAHH-PVSIGIAGGDIGFQFYSSGVFSGE--CTTH-LDHGVTAVGYGRSKNGLKYWI 305

Query: 355 VRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYATI 389
           ++NSWGP   + G+ +I++     +  CG+   A Y T+
Sbjct: 306 LKNSWGPKWGERGYMRIKKDIKPKHGQCGLAMNASYPTM 344


>gi|154332647|ref|XP_001562140.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059588|emb|CAM37170.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 63/337 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E Q+ + T  L+  S+ +LV C
Sbjct: 145 GMCGSCWAFSAIGN-----------------------IESQWYLATHSLISLSEQELVSC 181

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
                GC+G     + ++        + +   YPY + NG   +C+     V      G 
Sbjct: 182 DDVDEGCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGH 241

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +  N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY 
Sbjct: 242 VTIESN-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYN 296

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
               +PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 297 MTGEVPYWLIKNSWGKNWGEKGYVRVRKGTNECLIQE 333


>gi|313221004|emb|CBY31836.1| unnamed protein product [Oikopleura dioica]
          Length = 323

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 113/246 (45%), Gaps = 34/246 (13%)

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
           P+P +WDWRK N   P  DQ  CGSCW FS  G                        +E 
Sbjct: 101 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGN-----------------------VEA 137

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANG 267
             AI   +    S+ QLV+CA   +  GC+G     + EY   A G+ +E DYPY   +G
Sbjct: 138 GEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG 197

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIR 324
               C +D+ K  +          G E  M + +  Y P+S+      D +H  +GT   
Sbjct: 198 ---NCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSS 254

Query: 325 KNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           K D   SP D+ HAVL VG+G       +W V+NSW     ++G+F I+RG N CG+ Q 
Sbjct: 255 K-DCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQC 313

Query: 384 AGYATI 389
             +A I
Sbjct: 314 TSFALI 319


>gi|157864843|ref|XP_001681130.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124424|emb|CAJ02280.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 137/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   KLV  S+ QLV C    +G
Sbjct: 151 WAFSAVGN-----------------------IESQWAVAGHKLVRLSEQQLVSCDHVDNG 187

Query: 237 CDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     + E+        + +EK YPY +  G   +C+             ++    S
Sbjct: 188 CGGGLMLQAFEWVLRNMNGTVFTEKSYPYTSTFGYVPECSNSSELAPGARIDGYVSMESS 247

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           E  M   L K GP+S+ +++     Y+   +     +C    L H VLLVGY     +PY
Sbjct: 248 ERVMAAWLAKNGPISIAVDASSFMSYHSGVL----TSCIGEQLNHGVLLVGYNMTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGKDWGEKGYVRVTMGVNAC 329


>gi|1483570|emb|CAA68066.1| cathepsin l [Litopenaeus vannamei]
          Length = 328

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 154/350 (44%), Gaps = 63/350 (18%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYG-------TSEFSD 110
           ++ + ++ F  + GR+YA+ +E + R   F+Q     D H      G        ++F D
Sbjct: 19  SLRQQWRDFKAEHGRRYASVQEERYRLSVFEQNQQFIDDHNARFENGEVTFTLQMNQFGD 78

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE      F  +   +  + + R      ++  + D  +P   DWR K    P  DQ
Sbjct: 79  MTSEE------FTATMNGFLNVPSRRPTA---ILRADPDETLPKEVDWRTKGAVTPVKDQ 129

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        LEGQ+ +K GKLV  S+  LV+C
Sbjct: 130 KQCGSCWAFSTTGS-----------------------LEGQHFLKDGKLVSLSEQNLVDC 166

Query: 231 AKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-TGKD 286
           + +    GC G   + +  Y     G+++E  YPY+  +G   KC +D S V    TG  
Sbjct: 167 SDKFGNMGCMGGLMDQAFRYIKANKGIDTEDSYPYEAQDG---KCRFDASNVGATDTGYV 223

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSD-----LIHDYNGTPIRKNDETCSPYDLGHAVLL 341
            +       +KK +   GP+SV +++        HD  G      +E CS   L H VL 
Sbjct: 224 DVEHGSESALKKAVATIGPISVAIDASQPSFQFYHD--GVYY---EEGCSSTMLDHGVLA 278

Query: 342 VGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           VGYG+ +    YWLV+NSW     ++G+ ++ R   N CGI   A Y  +
Sbjct: 279 VGYGETEKGEAYWLVKNSWNTSWGNKGYIQMSRDKKNNCGIASQASYPLV 328


>gi|302794759|ref|XP_002979143.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
 gi|300152911|gb|EFJ19551.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
          Length = 227

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 115/235 (48%), Gaps = 31/235 (13%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P ++DWR+     P  +Q +CGSCW FS  G                        +EG 
Sbjct: 9   LPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGA-----------------------VEGA 45

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKF- 270
           + +K+ +L+   + QLV+C +   GC G     + EY    GLE+E+DYPY+  N +++ 
Sbjct: 46  HFLKSRELISLREEQLVDCDRMDGGCKGGDMLNAYEYIKAKGLEAEEDYPYQEENYKEYM 105

Query: 271 ----KCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
               +C +  SKV              + +   L K GPLS+ LN++ I DY G      
Sbjct: 106 FPHHRCHFRPSKVAATIANYSTVSEDEDQIAANLVKNGPLSIALNANYIMDYMGGVACP- 164

Query: 327 DETCSPYD-LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
              C   D + HAVLLVGYG   + PYW+++NSW     ++G+F++ RG   CG+
Sbjct: 165 -RICPGGDNMNHAVLLVGYGMDGDKPYWILKNSWSENYGEDGYFRLCRGFGVCGM 218


>gi|218478069|dbj|BAH03395.1| cathepsin L-like cysteine peptidase [Taenia solium]
          Length = 346

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 56/363 (15%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER------FEYFKQDGHKKH--- 100
            + +E S       +   +  + ++ GR Y+  EE   R        Y K    + +   
Sbjct: 17  AVVVETSALLTERELSRQWAGWKLQHGRVYSGKEEAYRRGIFARNLLYIKGQNRRFNAGL 76

Query: 101 ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDW 158
           E Y  G ++F+D    E   +       R   R+   R ++ K L        +PD  DW
Sbjct: 77  ESYSTGLNQFADLESSEFSERF---LGTRPESRVAGRRGRIWKALASAAG---LPDTVDW 130

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R KN+     +Q  CGSCWAFS  G                        LEG +A KTGK
Sbjct: 131 RDKNLVTEVKNQGNCGSCWAFSSTGA-----------------------LEGAFAKKTGK 167

Query: 219 LVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDK 276
           L+  S+ QLV+C+ +    GC+G +   + +Y  +  +E E  YPY+  +G    C Y++
Sbjct: 168 LISLSEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHFIEPESAYPYRATDG---PCRYNE 224

Query: 277 SKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN-------D 327
           S + + T  D      G+ET + + +   GP+S+ +++  +       +  N        
Sbjct: 225 S-LGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSLGFMFYRQVATNPHHGIYKS 283

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGY 386
             CS   L H VL +GYGKQD  PYWLV+NSWG     +G+  + +  +N CG+  +A +
Sbjct: 284 HWCSSKFLNHGVLAIGYGKQDGKPYWLVKNSWGTRWGMKGYIMMAKDYHNMCGVASLADF 343

Query: 387 ATI 389
             +
Sbjct: 344 PYV 346


>gi|401419663|ref|XP_003874321.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|1706259|sp|P35591.2|CYSP1_LEIPI RecName: Full=Cysteine proteinase 1; AltName: Full=Amastigote
           cysteine proteinase A-1; Flags: Precursor
 gi|1220383|gb|AAA91859.1| cysteine proteinase [Leishmania pifanoi]
 gi|322490556|emb|CBZ25817.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 354

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 156/364 (42%), Gaps = 56/364 (15%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +     DN      + +F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLN 77

Query: 96  GHKKHERYGTS-EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 154
               H  Y  S +F+D +P+E         +   Y R + D ++      +V  D   P 
Sbjct: 78  TQNPHAHYDVSGKFADLTPQEF---AKLYLNPDYYARHLKDHKE------DVHVDDSAPS 128

Query: 155 ---AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
              + DWR K    P  +Q  CGSCWAFS  G                        +EGQ
Sbjct: 129 GVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGN-----------------------IEGQ 165

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGE 268
           +A     LV  S+  LV C     GC+G   + ++ +   +H   + +E  YPY +  G 
Sbjct: 166 WAASGHSLVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGT 225

Query: 269 KFKCAYDKSKVKL-FTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           +  C +D+ +V    TG  FL   +  E + + + K GP++V +++     Y G  +   
Sbjct: 226 RPPC-HDEGEVGAKITG--FLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVV--- 279

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
              C  + L H VL+VG+ K    PYW+V+NSWG    ++G+ ++  G+N C ++     
Sbjct: 280 -SLCLAWSLNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVS 338

Query: 387 ATID 390
           AT++
Sbjct: 339 ATVE 342


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 154/348 (44%), Gaps = 52/348 (14%)

Query: 61  NENILET-FKAFIVKRGRQYANDEEIKERFEYFKQDGH--KKHE----------RYGTSE 107
           ++ IL T ++AF     + Y ++ E   RF+ F ++     KH           + G ++
Sbjct: 19  SQEILRTEWEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQ 78

Query: 108 FSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           F+D  P E +        +R     +A R         +  D  +P   DWRKK    P 
Sbjct: 79  FADLLPHEFVKMMNGYQGKR-----LAGRGSTYLPPANLN-DSSLPKTVDWRKKGAVTPV 132

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCWAFS  G                        LEGQ+ +KTGKLV  S+  L
Sbjct: 133 KDQGQCGSCWAFSSTGS-----------------------LEGQHFLKTGKLVSLSEQNL 169

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
           V+C+      GC+G   + S  Y     G+++E  YPY+  +G+   C Y K  V   T 
Sbjct: 170 VDCSSAYGNQGCNGGLMDNSFNYIKANGGIDTEDSYPYEAEDGD---CRYKKEDVGA-TD 225

Query: 285 KDFLHFN-GSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
             F+    GSE  ++K +   GP+SV +++        +    ++  CS   L H VL V
Sbjct: 226 TGFVDIKEGSEKDLQKAVATVGPVSVAIDASQQSFQLYSEGVYDEPNCSSESLDHGVLAV 285

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG ++   YWLV+NSW      +G+  + R  NN CGI   A Y  +
Sbjct: 286 GYGVKNGKKYWLVKNSWAETWGQDGYILMSRDKNNQCGIASSASYPLV 333


>gi|332024588|gb|EGI64786.1| Cathepsin O [Acromyrmex echinatior]
          Length = 356

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 158/343 (46%), Gaps = 58/343 (16%)

Query: 66  ETFKAFIVKRGRQYAND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSP 113
           E F  +I +  + Y ND  + +ERFE+F++              ++   YG +EFSD S 
Sbjct: 34  ELFANYIARYNKSYRNDPAKYEERFEHFQKSLRHIEKLNSLRSSQESAYYGLTEFSDLSD 93

Query: 114 EEILCKT--------GFKWSERTY--ERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           +E + +         G K +  +Y  +  +    ++++M+  +     +P  +DWR K V
Sbjct: 94  DEFIQQALIPDLPLRGQKHTTASYYHQHFMGSVNRMKRMIPII----GIPSKFDWRDKGV 149

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
            GP   Q  CG+CWAFS  G                       + E  YAI+ G L  FS
Sbjct: 150 VGPVMSQENCGACWAFSTVG-----------------------VAESMYAIENGTLHSFS 186

Query: 224 KSQLVECAKQCSGCDGCFFEPSIEY--THQAGLESEKDYPY--KNANGEKFKCAYDKSKV 279
             ++++C     GC G      + +    +  + SE DYP   +       K +   S V
Sbjct: 187 VQEMIDCMPGNFGCQGGDICSLLSWLLASKTRIISEIDYPLTLQTDTCRLHKISAKTSGV 246

Query: 280 KL--FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGH 337
           ++  FT   F+  +    +  +L  +GP++V +N+    +Y G  I+ N ++ S   L H
Sbjct: 247 RITDFTCDSFV--DAETELLTLLVTHGPVAVAVNAISWQNYLGGIIQYNCDS-SFNSLNH 303

Query: 338 AVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           AV +VGY  +  IP+++++NSWGP   ++G+  I  G N CGI
Sbjct: 304 AVQIVGYDTEARIPHYIIKNSWGPSFGNKGYIYIAVGKNLCGI 346


>gi|47213724|emb|CAF95155.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 336

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 30/242 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P   D+RKK       DQ ACGSCWAFS AG                        LEG 
Sbjct: 121 LPRNLDYRKKGAVTAVKDQGACGSCWAFSSAGA-----------------------LEGM 157

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKF 270
            A KTGKLV+ S   LV+C K+ SGC G +   + +Y     GL+SE  YPY    G++ 
Sbjct: 158 LAKKTGKLVDLSPQNLVDCVKENSGCGGGYMTNAFKYVATNKGLDSEAAYPYV---GQEQ 214

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
            C Y ++   +   +      G+E  +   L+K+GP+++ +++ L   +  +     D  
Sbjct: 215 PCQYKEAGKAVECRRYEEVPQGNEKLLAYALFKHGPVAIGIDATLTTFHLYSKGVYYDPD 274

Query: 330 CSPYDLGHAVLLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 387
           C+P D+ HAVLLVGYG  +    YW+V+NSWG     EG+  + R   N CGI  +A Y 
Sbjct: 275 CNPEDINHAVLLVGYGVTRRGQQYWIVKNSWGTGWGTEGYILMARNRGNLCGIANLASYP 334

Query: 388 TI 389
            +
Sbjct: 335 IM 336


>gi|412992445|emb|CCO18425.1| unknown [Bathycoccus prasinos]
          Length = 500

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 156/360 (43%), Gaps = 71/360 (19%)

Query: 64  ILETFKAFIV------KRGRQYANDEEIKERFEYFKQDGHKKHER------------YGT 105
           + E F+ F+       K+  +   +EE ++R E F+++  +  ER            +G 
Sbjct: 165 LREKFRHFVSVQFPEKKKEYERKTEEEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGV 224

Query: 106 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVT 164
           ++F D S EE   +     S  T      D  +  +M    E+D   +P  +DWR +   
Sbjct: 225 TKFFDLSEEEFREQYLGLLSTSTSSSASKDAFRKHQMEAPSEEDLEKLPQYYDWRARGAV 284

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  DQ  CGSCW FS                         G +EG   IKTGKLV  S+
Sbjct: 285 TPVKDQGQCGSCWTFSTT-----------------------GAIEGANFIKTGKLVSLSE 321

Query: 225 SQLVECAKQC---------SGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAY 274
            QL++C   C         SGC+G     ++EY     GL++EK YPYK    +  +   
Sbjct: 322 QQLLDCDVGCAPDIPNACDSGCNGGLPSNAMEYIVEHGGLDTEKSYPYKAYKEDTCRAKE 381

Query: 275 DKSKVKL----FTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
            K    +    F GK+  H      M   L KYGPLS+ +N+  +  Y G         C
Sbjct: 382 GKLGATISNYTFVGKNETH------MAHALVKYGPLSIGINAAWMQSYVGGVA--CPWLC 433

Query: 331 SPYDLGHAVLLVGYGKQ-------DNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           +   L H VL+VGYG++          PYW+++NSWG    +EG+++I +    CG+  +
Sbjct: 434 NKDALDHGVLIVGYGEEGFAPARLHKEPYWVIKNSWGMGWGEEGYYRICKDKGNCGVNNM 493


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 56/369 (15%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE 101
           + A +  +A+  +++F +  I E ++ F ++  +QY ++ E + R + F ++ HK  KH 
Sbjct: 5   IFALLALVAVAQAVSFADV-IKEEWQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHN 63

Query: 102 ----------RYGTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
                     + G ++++D    E      GF ++   ++++ A       +     +  
Sbjct: 64  QLYAAGEVSFKMGLNKYADMLHHEFHETMNGFNYT--LHKQLRASDATFTGVTFISPEHV 121

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
            +P + DWR K       DQ  CGSCWAFS                         G LEG
Sbjct: 122 KLPQSVDWRNKGAVTGVKDQGHCGSCWAFSST-----------------------GALEG 158

Query: 211 QYAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG 267
           Q+  KTG L+  S+  LV+C+ +   +GC+G   + +  Y     G+++EK YPY+   G
Sbjct: 159 QHFRKTGTLISLSEQNLVDCSTKYGNNGCNGGLMDNAFRYIKDNGGIDTEKSYPYE---G 215

Query: 268 EKFKCAYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHD---YNGTP 322
               C ++K  +   T + F     G E  + + +   GP+SV +  D  H+   +  T 
Sbjct: 216 IDDSCHFNKGTIGA-TDRGFTDIPQGDEKKLAQAVATIGPVSVAI--DASHESFQFYSTG 272

Query: 323 IRKNDETCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
           +  ++  C P +L H VL+VGYG  +N   YWLV+NSWG    D+GF K+ R  +N CGI
Sbjct: 273 VY-DEPQCDPQNLDHGVLVVGYGTDENGKDYWLVKNSWGTTWGDKGFIKMARNDDNQCGI 331

Query: 381 EQIAGYATI 389
              + Y  +
Sbjct: 332 ATASSYPLV 340


>gi|154332649|ref|XP_001562141.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059589|emb|CAM37171.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 63/337 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E Q+ + T  L+  S+ +LV C
Sbjct: 145 GMCGSCWAFSAIGN-----------------------IESQWYLATHSLISLSEQELVSC 181

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
                GC+G     + ++        + +   YPY + NG   +C+     V      G 
Sbjct: 182 DDVDEGCNGGLMLQAFDWLLNNRNGAVYTGVSYPYVSGNGSVPECSESSDLVIGAYIDGH 241

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +  N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY 
Sbjct: 242 VTIESN-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYN 296

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
               +PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 297 MTGEVPYWLIKNSWGENWGEKGYVRVRKGTNECLIQE 333


>gi|348531523|ref|XP_003453258.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 341

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 140/309 (45%), Gaps = 61/309 (19%)

Query: 99  KHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVA---------DREKVEKMLMEVEKD 149
           K  R G ++F+D   EE             Y+R+V+            +       + K 
Sbjct: 76  KSYRLGMTQFADMENEE-------------YKRLVSQGCLHSFNSSLPRRGSTFFRLPKG 122

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
             +PD  DWR K       +Q  CGSCWAFS  G                        LE
Sbjct: 123 TVLPDTVDWRDKGYVTNVQNQMDCGSCWAFSATGS-----------------------LE 159

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN 266
           GQ+  KTGKLV  SK QLV+C+ +    GC+G   + + +Y     G+++E+ YPY+  +
Sbjct: 160 GQHFRKTGKLVSLSKQQLVDCSGEFGNEGCNGGLMDSAFQYIQANGGIDTEESYPYEAED 219

Query: 267 GEKFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHD----YNGT 321
           G   KC Y+ KS     TG   +     ET+K+ +   GP+SV +  D  H     Y   
Sbjct: 220 G---KCRYNPKSTGATCTGYVDVQPANEETLKEAVATIGPISVAI--DAFHPSFQFYESG 274

Query: 322 PIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
              + D  CS   L HAVL VGYG ++ + YWLV+NS G    ++G+ K+ R  +N CGI
Sbjct: 275 VYDEPD--CSSTMLDHAVLAVGYGTENGLDYWLVKNSAGVGWGEKGYIKMSRNKSNQCGI 332

Query: 381 EQIAGYATI 389
              A Y  +
Sbjct: 333 ATAASYPLV 341


>gi|313229615|emb|CBY18430.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 113/246 (45%), Gaps = 34/246 (13%)

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
           P+P +WDWRK N   P  DQ  CGSCW FS  G                        +E 
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGN-----------------------VEA 140

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANG 267
             AI   +    S+ QLV+CA   +  GC+G     + EY   A G+ +E DYPY   +G
Sbjct: 141 GEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG 200

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIR 324
               C +D+ K  +          G E  M + +  Y P+S+      D +H  +GT   
Sbjct: 201 ---NCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSS 257

Query: 325 KNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           K D   SP D+ HAVL VG+G       +W V+NSW     ++G+F I+RG N CG+ Q 
Sbjct: 258 K-DCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQC 316

Query: 384 AGYATI 389
             +A I
Sbjct: 317 TSFALI 322


>gi|300120790|emb|CBK21032.2| unnamed protein product [Blastocystis hominis]
          Length = 516

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 154/360 (42%), Gaps = 62/360 (17%)

Query: 55  GSLTFDNENILET---------FKAFIVKRGRQYANDEEIKERFEYF--------KQDGH 97
           GS+  D+   L T         FK F VK  ++  ND E KER   F        K +  
Sbjct: 195 GSVVGDSHKFLSTRFPRTAAAEFKQF-VKDNKKCYNDVEYKERQLNFLRNKARVEKVNSE 253

Query: 98  KKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 157
            +  +   +  +DRS  E+    G K S++  +   A R            +G  PD  D
Sbjct: 254 NRSYKLKLNHLADRSESELRAMMGLKRSQK--KDFAAHRY--------TPSNGVKPDFVD 303

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR+K    P  DQ  CGSCW +   G                       +LEGQY +K G
Sbjct: 304 WREKGAVTPVKDQCMCGSCWTYGTVG-----------------------VLEGQYFLKYG 340

Query: 218 KLVEFSKSQLVECAKQCSGCDGCF----FEPSIEYTHQAGLESEKDY-PYKNANGEKFKC 272
           KLV+FS+  L++C+    G DGC     F       H  GL +++DY  Y   +G    C
Sbjct: 341 KLVKFSEQNLLDCSWNF-GNDGCNGGEDFRAYGWMLHNGGLMTDEDYGHYLGIDGW---C 396

Query: 273 AYDKSKVKLFTGKDFLHFNGS-ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
            ++KS   +      L   GS E ++  +   GP+SV +       +    +  N E  S
Sbjct: 397 HFNKSAAAVKITDYVLITPGSVEELEDAVANVGPISVGIAVTTDFLFYAEGVFDNPECSS 456

Query: 332 PY-DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
              D  HAVL VGYG ++   YWL++NSW     D G+ KI R NN CG+   A Y  ++
Sbjct: 457 AVEDQAHAVLAVGYGTENGKDYWLIKNSWSTYWGDNGYVKIARKNNICGVATAASYPILE 516


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 160/360 (44%), Gaps = 58/360 (16%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------------GH 97
           + +  SL+    +  E +K +  + G++Y +DEE   R   ++++             GH
Sbjct: 11  VCVVSSLSMSFTDFDEDWKEWKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHNLKYDLGH 70

Query: 98  KKHERYGTSEFSD-RSPEEILCKTGFKWSERTYERIVADREKVEK--MLMEVEKDGPVPD 154
             ++  G ++F+D ++ E +   TGF+         V    K  K    +     G +P 
Sbjct: 71  FTYD-LGMNQFADLQNKEFVAMMTGFR---------VNGTSKAAKGSTFLPPNNVGKLPK 120

Query: 155 AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI 214
             DWR K    P  DQ  CGSCWAFS  G                        LEGQ+  
Sbjct: 121 TVDWRTKGYVTPVKDQGQCGSCWAFSATGS-----------------------LEGQHFK 157

Query: 215 KTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE-KFKC 272
           KTGKLV  S+  LV+C+ +  GC+G   + + +Y   A G+++E+ YPY   +G   FK 
Sbjct: 158 KTGKLVSLSEQNLVDCSDKNYGCNGGLMDRAFQYIIDAGGIDTEESYPYIAMDGNCHFKT 217

Query: 273 AYDKSKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
           A   + V  +T       +GSE  ++K +   GP+SV +++             N+  CS
Sbjct: 218 ANVGATVTGYTDVT----SGSEKALQKAVAHIGPISVAIDASHFSFQLYQSGVYNEPGCS 273

Query: 332 PYDLGHAVLLVGYGKQ-DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
              L H VL VGYG   D   YW+V+NSW       G+  + R  +N CGI   A Y  +
Sbjct: 274 STLLDHGVLAVGYGTTIDGTDYWIVKNSWAETWGMNGYIWMSRNKDNQCGIATQASYPLV 333


>gi|158300877|ref|XP_001689282.1| AGAP011828-PA [Anopheles gambiae str. PEST]
 gi|157013372|gb|EDO63348.1| AGAP011828-PA [Anopheles gambiae str. PEST]
          Length = 344

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 166/350 (47%), Gaps = 49/350 (14%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFS 109
           E + E + AF ++  ++Y ++ E + R + + Q+ HK  KH           R   ++++
Sbjct: 22  ELVKEEWTAFKLQHRKKYDSETEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYA 81

Query: 110 DRSPEEIL-CKTGFKWSERTYERIV-ADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGP 166
           D   EE +    GF  S     +++  + + +E+ +  +E  +  VP A DWR K     
Sbjct: 82  DLLHEEFVHTLNGFNRSVSGKGQLLRGELKPIEEPVTWIEPANVDVPTAMDWRTKGAVTQ 141

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCW+FS                         G LEGQ+  KTGKLV  S+  
Sbjct: 142 VKDQGHCGSCWSFSAT-----------------------GALEGQHFRKTGKLVSLSEQN 178

Query: 227 LVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           LV+C+++   +GC+G   + + +Y     G+++EK YPY+  + E   C Y+   V   T
Sbjct: 179 LVDCSQKYGNNGCNGGMMDFAFQYIKDNKGIDTEKSYPYEAIDDE---CHYNPKAVGA-T 234

Query: 284 GKDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLL 341
            K F+    G+E  + K L   GP+SV +++        +     +  C    L H VL 
Sbjct: 235 DKGFVDIPQGNEKALMKALATVGPVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLA 294

Query: 342 VGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           VGYG  +D   YWLV+NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 295 VGYGTTEDGEDYWLVKNSWGTTWGDQGYVKMARNRDNHCGIATTASYPLV 344


>gi|195382749|ref|XP_002050091.1| GJ20385 [Drosophila virilis]
 gi|194144888|gb|EDW61284.1| GJ20385 [Drosophila virilis]
          Length = 370

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 56/346 (16%)

Query: 65  LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQDGHKKHERY---------GTSEFSDRS 112
           ++ F  F+ + G+ Y  A D +++E  F   K     K+  +           + F+D +
Sbjct: 60  VQDFGDFLAQSGKSYLSAADRQLREGIFSARKTLVEAKNAAFKSGASTYELAVNAFADLT 119

Query: 113 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
             E L + TG + S    +R      K  ++  ++  + P+PD++DWR+K    P   Q 
Sbjct: 120 NAEFLKQLTGLRKSLSGEQR-----AKAHRIAPKLATNVPLPDSFDWREKGGVTPVKFQG 174

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCW+F+  G                        +EG    KTGKL   S+  LV+C 
Sbjct: 175 ECGSCWSFAATG-----------------------AIEGHVFRKTGKLPNLSEQNLVDCG 211

Query: 232 K---QCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAY--DKSKVKLFTGK 285
                 +GCDG F E +  + T Q G+ + + YPY +   +K  C Y  D S  ++ TG 
Sbjct: 212 TVDLGLAGCDGGFQEYAFNFITEQNGIAAGEKYPYVD---KKDTCKYKNDISGAQI-TGF 267

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
             +     + MK ++   GPL+  +N    L+    G      DE C+  ++ H++L+VG
Sbjct: 268 AAIPPKDEQAMKTVVATQGPLACSVNGLESLLLYKRGI---YADEECNKGEVNHSILVVG 324

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YG +D   YW+V+NSW     ++G+F++ RG N CGI     Y  +
Sbjct: 325 YGTEDGQDYWIVKNSWDKAWGEDGYFRLPRGKNFCGIASECSYPVV 370


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 120/247 (48%), Gaps = 39/247 (15%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD+ DWR +    P  DQ  CGSCWAFS  G                        LEGQ
Sbjct: 108 APDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGS-----------------------LEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE 268
              KTGKLV  S+  LV+C  A   +GC+G   + +  Y  +  G++SE  YPY   +G 
Sbjct: 145 NFKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENNGIDSEASYPYTAKDG- 203

Query: 269 KFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRK- 325
             KCA+ K  V   T   F+   +G E  +K+ +   GP+SV +  D  H ++    RK 
Sbjct: 204 --KCAFTKPNVAA-TDTGFVDIPSGDENKLKEAVASVGPISVAI--DASH-FSFQFYRKG 257

Query: 326 --NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQ 382
             N+  CS  +L H VL+VGYG +    YWLV+NSW     D+G+ K+ R   N CGI  
Sbjct: 258 VYNERKCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMSRNAKNQCGIAT 317

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 318 NASYPLV 324


>gi|12805315|gb|AAH02125.1| Ctss protein [Mus musculus]
          Length = 340

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEILC+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEILCRMGALRIPRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 135 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 171

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 172 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SK 227

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 228 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 286

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 287 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASDCSYPEI 340


>gi|313220237|emb|CBY31096.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 161/347 (46%), Gaps = 59/347 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE----RYGTSEFSDRSPEEILC 118
           F+ F+++  + Y+ ++E   RF+ F ++      H   E    +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFTDLSDFEFRR 108

Query: 119 K-TGFK-----WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
              G K      + + YER    R   +K+      D    + +DW +K       +Q  
Sbjct: 109 HYLGLKPELKNLNRKKYER--KSRNSSKKLKFAKTAD----ETFDWVEKGAVTEVKNQGM 162

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS  G                        +EG +   TG L+  S+ +LV+C +
Sbjct: 163 CGSCWAFSTTGN-----------------------IEGAWFKATGDLISLSEQELVDCDQ 199

Query: 233 QCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFN 291
           + SGC+G   + + E   +  GLE+E+ YPY   +G +  C ++KS  K+    DF+   
Sbjct: 200 KDSGCNGGLMDQAFEEVIRIGGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFMDIG 255

Query: 292 GSETMKKILYK-YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
             E       + +GPLS+ +N+  +  Y G         CSP  L H VL+VGYG + + 
Sbjct: 256 EDEEEIAEALEEHGPLSIAINAFGMQFYRGGVSHPLSFLCSPDGLDHGVLMVGYGVEHHT 315

Query: 351 --------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                   PYW ++NSWGP   ++G++++ RG   CG+ ++   + +
Sbjct: 316 TWRHRHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVNKMVSTSIV 362


>gi|93279455|pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor
          Length = 215

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 117/241 (48%), Gaps = 29/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD+ D+RKK    P  +Q  CGSCWAFS  G                        LEGQ
Sbjct: 1   TPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQ 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 270
              KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+  
Sbjct: 38  LKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQRNRGIDSEDAYPYV---GQDE 94

Query: 271 KCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
            C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     DE 
Sbjct: 95  SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDEN 154

Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 388
           CS  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  
Sbjct: 155 CSSDNLNHAVLAVGYGIQKGNKHWIIKNSWGESWGNKGYILMARNKNNACGIANLASFPK 214

Query: 389 I 389
           +
Sbjct: 215 M 215


>gi|213623956|gb|AAI70449.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 137/290 (47%), Gaps = 42/290 (14%)

Query: 106 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 162
           ++  D + EE++   TG K         +  R K   +  E EK  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHEK-APEKVPDSIDYRKKG 127

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
              P  +Q +CGSCWAFS  G                        LEGQ   K GKLV  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVG-----------------------ALEGQLKKKKGKLVVL 164

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVK 280
           S   LV+C K+  GC G +   + EY     G++SEK YPY    GE  +C Y+ S +  
Sbjct: 165 SPQNLVDCVKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAA 221

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
              G   +     + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL
Sbjct: 222 ACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVL 281

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 282 AVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 157/348 (45%), Gaps = 54/348 (15%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHE----------RYGTSEFSDR 111
           I E ++ F ++  + Y ++ E + R + F ++ HK  KH           + G ++++D 
Sbjct: 23  IKEEWQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADM 82

Query: 112 SPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP----VPDAWDWRKKNVTGPA 167
              E      FK +   Y   +    + ++    +    P    VP A DWR+       
Sbjct: 83  LHHE------FKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSV 136

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCW+FS  G                        LEGQ+  K G LV  S+  L
Sbjct: 137 KDQGHCGSCWSFSSTGS-----------------------LEGQHFRKAGVLVSLSEQNL 173

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF-T 283
           V+C+ +   +GC+G   + +  Y     G+++EK YPY+   G    C ++K+ V    T
Sbjct: 174 VDCSTKYGNNGCNGGLMDNAFRYIKDNGGVDTEKSYPYE---GIDDSCHFNKATVGATDT 230

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
           G   +     E M K +   GP++V +++        +    ND  CS  +L H VL+VG
Sbjct: 231 GFVDIPQGDEEAMMKAVATMGPVAVAIDASNESFQLYSEGVYNDPNCSSDNLDHGVLVVG 290

Query: 344 YGK-QDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           YG  +D   YWLV+NSWG    D+G+ K+ R  +N CGI   + + T+
Sbjct: 291 YGTDKDGQDYWLVKNSWGTTWGDQGYIKMARNQDNQCGIATASSFPTV 338


>gi|313213098|emb|CBY36961.1| unnamed protein product [Oikopleura dioica]
          Length = 326

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/246 (33%), Positives = 113/246 (45%), Gaps = 34/246 (13%)

Query: 151 PVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
           P+P +WDWRK N   P  DQ  CGSCW FS  G                        +E 
Sbjct: 104 PMPTSWDWRKDNKVSPVKDQGQCGSCWTFSTTGN-----------------------VEA 140

Query: 211 QYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQA-GLESEKDYPYKNANG 267
             AI   +    S+ QLV+CA   +  GC+G     + EY   A G+ +E DYPY   +G
Sbjct: 141 GEAIHLNEYHTLSEQQLVDCAGAFNNHGCNGGLPSQAFEYIAAAPGIMTEADYPYTAKDG 200

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIR 324
               C +D+ K  +          G E  M + +  Y P+S+      D +H  +GT   
Sbjct: 201 ---NCVFDQKKAAVHVYGSVNITRGDEVEMAEAMVMYQPISIAFEVVDDFMHYKSGTYSS 257

Query: 325 KNDETCSPYDLGHAVLLVGYGKQD-NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
           K D   SP D+ HAVL VG+G       +W V+NSW     ++G+F I+RG N CG+ Q 
Sbjct: 258 K-DCKGSPTDVNHAVLAVGFGTDGAGTDFWTVKNSWSKDWGNQGYFNIQRGVNMCGLSQC 316

Query: 384 AGYATI 389
             +A I
Sbjct: 317 TSFALI 322


>gi|154332645|ref|XP_001562139.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059587|emb|CAM37169.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 63/337 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 144

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E ++ + T  L+  S+ +LV C
Sbjct: 145 GMCGSCWAFSAIGN-----------------------IESKWYLATHSLISLSEQELVSC 181

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
                GC+G     + ++        + +   YPY + NG   +C+     V      G 
Sbjct: 182 DDVDEGCNGGLMLQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGH 241

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +  N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY 
Sbjct: 242 VTIESN-EDTMAAWLAANGPIAIAVDASAFMSYTGGVL----TSCDGKQLNHGVLLVGYN 296

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
               +PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 297 MTGEVPYWLIKNSWGENWGEKGYVRVRKGTNECLIQE 333


>gi|535600|gb|AAA29137.1| cathepsin [Fasciola hepatica]
          Length = 326

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 113/239 (47%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDRIDWRESGYVTEVKDQGGCGSCWAFSTTGA-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+      GC+G   E + EY  + GLE+E  YPY+   G+ 
Sbjct: 145 YMKNEKTSISFSEQQLVDCSGPFGNYGCNGGLMENAYEYLKRFGLETESSYPYRAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   TG   +H      ++ ++    P +V L+  SD +   +G      
Sbjct: 204 --CRYNEQLGVAKVTGYYTVHSGDEVELQNLVGCRRPAAVALDVESDFMMYRSGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPDRLNHGVLAVGYGIQDGTDYWIVKNSWGTWWGEDGYIRMVRKRGNMCGIASLA 317


>gi|283046734|ref|NP_001164314.1| cathepsin L precursor [Tribolium castaneum]
 gi|270001247|gb|EEZ97694.1| cathepsin L precursor [Tribolium castaneum]
          Length = 328

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 157/361 (43%), Gaps = 57/361 (15%)

Query: 48  VDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERY---- 103
           V  LA+  +L      +   +  F +   +QY++  E  +R   F QD   K E +    
Sbjct: 6   VLALAVVATLAVPQSPVHAKWAEFKLTHKKQYSSPIEELKRMAIF-QDNLVKIEEHNAKF 64

Query: 104 ---------GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLME-VEKDGPVP 153
                      ++F+D + +E +              +    +K EK+ +  V+ D P  
Sbjct: 65  AKGEVTYSKAVNQFADMTADEFMAYVN--------RGLATKPKKNEKLRLPFVQSDKPAA 116

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
              DWR   V+    +Q  CGSCW+FS  G                        +EGQ A
Sbjct: 117 AEVDWRNSAVS-EVKNQGQCGSCWSFSTTG-----------------------AVEGQLA 152

Query: 214 IKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK 271
           I    L   S+  LV+C+     +GC+G + + + +Y H  G+ SE  YPY  + G    
Sbjct: 153 ISGRGLTSLSEQNLVDCSSAYGNAGCNGGWMDSAFDYIHDNGIMSESAYPYTASEG---S 209

Query: 272 CAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDET 329
           C ++ S+ V    G   L       +K  +   GP++V L+ +D +  Y+G  +   D T
Sbjct: 210 CRFNPSESVTSLQGYYDLPSGDENALKSAVANNGPIAVALDATDELQFYSGGVLY--DTT 267

Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 388
           CS   L H VL+VGYG +    YW+V+NSWG    ++G+++  R  NN CGI   A Y  
Sbjct: 268 CSAQALNHGVLVVGYGSEGGQDYWIVKNSWGSGWGEQGYWRQARNRNNNCGIATAASYPA 327

Query: 389 I 389
           +
Sbjct: 328 L 328


>gi|397516975|ref|XP_003828695.1| PREDICTED: cathepsin W [Pan paniscus]
          Length = 376

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C++   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVQELLDCSRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCQGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 117/244 (47%), Gaps = 33/244 (13%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD  DWR +    P  DQ  CGSCWAFS  G                        LEGQ
Sbjct: 108 APDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGS-----------------------LEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVEC--AKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
           +  KTGKLV  S+  LV+C  A   +GC+G   + +  Y  +  G++SE  YPY   +G 
Sbjct: 145 HFKKTGKLVSLSEQNLVDCSTAYGNNGCNGGLMDNAFTYIKENKGIDSEASYPYTAEDG- 203

Query: 269 KFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
             KC + K  V   T   F+    G+E  +K+ +   GP+SV +++        +    N
Sbjct: 204 --KCVFKKPSVAA-TDTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQFYSSGVYN 260

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAG 385
           + +CS  +L H VL+VGYG +    YWLV+NSW     D+G+ K+ R   N CGI   A 
Sbjct: 261 EPSCSSTELDHGVLVVGYGTESGKDYWLVKNSWNTSWGDKGYIKMRRNAKNQCGIATKAS 320

Query: 386 YATI 389
           Y  +
Sbjct: 321 YPLV 324


>gi|349604730|gb|AEQ00199.1| Cathepsin K-like protein, partial [Equus caballus]
          Length = 219

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 29/244 (11%)

Query: 149 DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
           +G  PD+ D+RKK    P  +Q  CGSCWAFS  G                        L
Sbjct: 2   EGRAPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------AL 38

Query: 209 EGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANG 267
           EGQ   KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G
Sbjct: 39  EGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---G 95

Query: 268 EKFKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           +   C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     
Sbjct: 96  QDESCMYNPTGKAAKCRGYREIPQGNEKALKRAVARVGPVSVAIDASLTSFQFYSRGVYY 155

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
           DE C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A 
Sbjct: 156 DENCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANMAS 215

Query: 386 YATI 389
           +  +
Sbjct: 216 FPKM 219


>gi|403293523|ref|XP_003937763.1| PREDICTED: cathepsin W [Saimiri boliviensis boliviensis]
          Length = 373

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 66/363 (18%)

Query: 52  AIEGSLTFDNEN-----ILETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHER 102
            I GSLT  +       + E FK F  +  R Y   EE   R + F     Q    + E 
Sbjct: 21  GIRGSLTAQDLGPQPLELKEAFKFFQRQFNRSYLTPEEHARRLDIFAHNLAQAQQLQEED 80

Query: 103 YGTSEF-----SDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 157
           +GT+EF     SD + EE     G       + R       + +++   E +  VP   D
Sbjct: 81  FGTAEFGVTPFSDLTEEEFGQLYG-------HRRAAGGVPGMGRVVGPEEPEESVPHTCD 133

Query: 158 WRK-KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           WRK         +Q  C  CWA + AG                        +E  + I  
Sbjct: 134 WRKVAGAISSIRNQGNCNCCWAMAAAGN-----------------------IEALWGINF 170

Query: 217 GKLVEFSKSQLVECAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYD 275
            K V  S  +L++C +  +GC G + +E  +   + +G+ SE+DYP++ AN    +C + 
Sbjct: 171 LKFVNVSVQELLDCGRCGNGCYGGYVWEAFLTVLNNSGVASERDYPFR-ANFRPHRC-HA 228

Query: 276 KSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 334
           K+  K+   +DF+    +E  + + L  YGP++V +N   +  Y    I+ +  TC P  
Sbjct: 229 KTSNKVAWIQDFIFLPDNEQRIAQYLATYGPITVTINMKYLKLYQKGVIKASPTTCDPQF 288

Query: 335 LGHAVLLVGYGKQDN-----------------IPYWLVRNSWGPIGPDEGFFKIERGNNA 377
           + H+VLLVG+G   +                  PYW+++NSWG    +EG+F++ RG+N 
Sbjct: 289 VDHSVLLVGFGSDKSEGMGAETVSSPSRHPRSTPYWILKNSWGAQWGEEGYFRLHRGSNT 348

Query: 378 CGI 380
           CGI
Sbjct: 349 CGI 351


>gi|377823949|gb|AFB77219.1| cathepsin L1 [Fasciola gigantica]
          Length = 326

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 109/239 (45%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+      GC G   E + EY  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNYGCMGGLMENAYEYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y++   V   T    +H      +K ++   GP +V ++  SD +    G      
Sbjct: 204 --CRYNRQLGVAKVTDYYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRGGI---YQ 258

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 259 SQTCSPLGVNHAVLAVGYGTQGGTDYWIVKNSWGSSWGERGYIRMVRNRGNMCGIASLA 317


>gi|259016196|sp|P56202.2|CATW_HUMAN RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
          Length = 376

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP + DWRK  +   P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|195455845|ref|XP_002074891.1| GK22909 [Drosophila willistoni]
 gi|194170976|gb|EDW85877.1| GK22909 [Drosophila willistoni]
          Length = 370

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 170/407 (41%), Gaps = 72/407 (17%)

Query: 16  MLIQAVFLLCGVASC------------LCLPSLTDRITDQVVARVDTLAIEGSLTFDNEN 63
            L+    +L G+AS               + ++ +R+ D++      L    +L      
Sbjct: 3   FLVAFPLILAGLASAQFGGLRPGQRLGAAIGNVANRVQDRLAGIASRLPAPPAL-----R 57

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSDR 111
            +E F  F+ + G+ Y N+ +       F       D   +    GTS        F+D 
Sbjct: 58  DVENFGDFLTQSGKTYLNEADRVLHENVFSARKNLVDAGNEAFSKGTSTYKLAVNAFADL 117

Query: 112 SPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           +  E L + TG + S +   ++ A R+        V+  G VPDA+DWR++        Q
Sbjct: 118 TNAEFLSQLTGRRKSNQGESKVAASRQSAH-----VQPGGNVPDAFDWRQQGGVTSVKYQ 172

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAF+  G                        +EG    KTGKL   S+  LV+C
Sbjct: 173 GTCGSCWAFATTG-----------------------AIEGHVFRKTGKLPNLSEQNLVDC 209

Query: 231 AK---QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFTG 284
                  +GCDG + E ++ + +  Q G+     YPY +    K  C Y  S      TG
Sbjct: 210 GSLDFGLNGCDGGYQEYAMAFINEKQRGISKSDQYPYID---NKETCKYTNSLSGAQITG 266

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
              +       MKK++   GPL+  LN    L+   +G      DE C+  +  H+VL+V
Sbjct: 267 FASIPPKDEALMKKVIATLGPLACSLNGLESLLLYKSGI---YADEKCNDDEPNHSVLVV 323

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           GYG +    YW+++NSW     ++G+F++ RG N CGI     Y  +
Sbjct: 324 GYGSEKGQDYWIIKNSWDKNWGEDGYFRLPRGKNFCGIALECSYPIV 370


>gi|319976406|gb|ADV90878.1| cysteine proteinase B [Leishmania donovani]
          Length = 332

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 128/284 (45%), Gaps = 37/284 (13%)

Query: 100 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDW 158
           H R+G ++F D S  E   +              A ++   +   +   D   VPDA DW
Sbjct: 2   HARFGITKFFDLSEAEFAARY-----LNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDW 56

Query: 159 RKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK 218
           R+K    P  +Q ACGSCWAFS  G                        +E Q+A     
Sbjct: 57  REKGAVTPVKNQGACGSCWAFSAVGN-----------------------IESQWARAGHG 93

Query: 219 LVEFSKSQLVECAKQCSGCDGCFFEPSIEYT--HQAGLE-SEKDYPYKNANGEKFKCAYD 275
           LV  S+ QLV C  + +GC+G     + E+   H  G+  +EK YPY + NG+  +C   
Sbjct: 94  LVSLSEQQLVSCDDKDNGCNGGLMLQAFEWLLRHMYGIVFTEKSYPYTSGNGDVAECLNS 153

Query: 276 KSKVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 334
              V       ++    +ET M   L + GP+++ +++     Y    +     +C+   
Sbjct: 154 SKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDA 209

Query: 335 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
           L H VLLVGY K   +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 210 LNHGVLLVGYNKTGGVPYWVIKNSWGEDWGEKGYVRVAMGLNAC 253


>gi|114638622|ref|XP_001170363.1| PREDICTED: cathepsin W [Pan troglodytes]
          Length = 376

 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C++   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVQELLDCSRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCQGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAERVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|7271897|gb|AAF44679.1|AF239268_1 cathepsin L, partial [Fasciola gigantica]
          Length = 219

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 110/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR         DQ  CGSCWAFS  G                        +EGQ
Sbjct: 1   VPDKIDWRDSGYVTKVKDQEDCGSCWAFSTTGT-----------------------MEGQ 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           +    G  V FS+ QLV+C+     +GC G   E + EY  + GLE E  YPY+   G  
Sbjct: 38  FMKNIGFNVSFSEQQLVDCSSDFGNNGCRGGLMEIAYEYLRRFGLEIESTYPYRAVEG-- 95

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C YD+   V   TG   +H      ++ ++   GP +V L+  SD +   +G      
Sbjct: 96  -PCRYDRRLGVAKVTGYYIVHSGDEVELQNLVGIEGPAAVALDVESDFVMYRSGI---YQ 151

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  L H VL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 152 SQTCSPDRLNHGVLAVGYGTQSGTDYWIVKNSWGTWWGEGGYIRMVRNRGNMCGIASMA 210


>gi|198432215|ref|XP_002130162.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 331

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 153/358 (42%), Gaps = 65/358 (18%)

Query: 55  GSLTFDNENILETFKAFIVKRGRQYANDEEIK------ERFEYFKQ-----DGHKKHERY 103
            S+ F NE   E +K      G+ Y  +EE+K      E  +Y  Q     D  K   + 
Sbjct: 16  ASVVFQNE--WEEWKTLY---GKVYRAEEELKRQYIWLENLKYVTQHNLEADEGKHTYKV 70

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVE---KMLMEVEKDGPVPDAWDWRK 160
            T++F+D S +E        W E    ++     ++       M V      P   DWRK
Sbjct: 71  DTNQFADLSNDE--------WRELMTSQVTRPTNQMSFCNMTFMTVGDHVIAPKNVDWRK 122

Query: 161 KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
           +    P  DQ  CGSCWAFS  G                        LEGQ+  KTGKLV
Sbjct: 123 EGYVTPVKDQKQCGSCWAFSTTGS-----------------------LEGQHFKKTGKLV 159

Query: 221 EFSKSQLVECAKQ--CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS 277
             S+  LV+C+ +    GC G   +   EY     G+++E  YPY   N  + +C Y +S
Sbjct: 160 SLSEQNLVDCSMKEGNHGCQGGLMDLGFEYIFDNGGIDTESSYPYMAKN--EPQCMYKRS 217

Query: 278 KV-KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN----DETCSP 332
                 TG   +       + K +   GP+SV +++     +    + K+    + +CS 
Sbjct: 218 NSGATLTGCVDIKRGSESALMKAVADVGPISVAIDAG----HKSFQMYKSGVYYEPSCSS 273

Query: 333 YDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             L H VL VG+G  +   +WLV+NSWGPI   EG+  + R  +N CGI   A Y  +
Sbjct: 274 VKLDHGVLAVGFGADNGEDFWLVKNSWGPIWGMEGYIMMSRNRDNNCGIATQASYPLV 331


>gi|169659203|dbj|BAG12786.1| putative cysteine protease [Sorogena stoianovitchae]
          Length = 293

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 133/287 (46%), Gaps = 52/287 (18%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++F+D + EE             Y  +V +  KV+     V +DG   +  DWR+K  
Sbjct: 49  GLNQFADLTTEEF---------SSLYLGLVLE-NKVQASESVVLQDGDSEENVDWRQKGA 98

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
             P  DQ +CGSCWAFS                         G +EG     TGKL+  S
Sbjct: 99  VTPVKDQKSCGSCWAFSA-----------------------TGAMEGALVKSTGKLINLS 135

Query: 224 KSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFT 283
           + QLV+C  +C+GC+G     + +Y    G  +EKDYPYK  +G   + A D +K+K   
Sbjct: 136 EQQLVDCVTKCNGCNGGLMTAAFDYVLGRGRATEKDYPYKGVDGRCKQTATD-NKIK--- 191

Query: 284 GKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           G + +  N  + +K  +    PLSV +N +  I  Y    I   D  C    L H VL V
Sbjct: 192 GYNNVPQNNYKALKAAVAS--PLSVAVNAAGTIQRYKSGVI---DANCGT-RLDHGVLAV 245

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-----NACGIEQIA 384
           GY  +D   YW+V+NSWG    + G+F+++ G        CGI  +A
Sbjct: 246 GYQGED---YWIVKNSWGNGYGENGYFRVKMGTQNGGAGVCGINMMA 289


>gi|31558997|gb|AAP49831.1| cathepsin L [Fasciola hepatica]
          Length = 326

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 115/240 (47%), Gaps = 37/240 (15%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGSCWAFS  G                        +EGQ
Sbjct: 108 VPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MEGQ 144

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C+     +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 145 YMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 203

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSET-MKKILYKYGPLSVLLN--SDLIHDYNGTPIRK 325
             C Y+K   V   TG  +   +GSE  +K ++   GP +V ++  SD +   +G     
Sbjct: 204 --CRYNKQLGVAKVTGY-YTVPSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---Y 257

Query: 326 NDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
             +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 258 QSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMARNRGNMCGIASLA 317


>gi|405963298|gb|EKC28885.1| Cathepsin L [Crassostrea gigas]
          Length = 265

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 35/244 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD  DW K+    P  +Q  CGSCWAFS  G                        LEGQ
Sbjct: 51  LPDTVDWSKEGYVTPVKNQGQCGSCWAFSTTGG-----------------------LEGQ 87

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKF 270
           +  KTGKLV  S+  L++C+K+  GC+G   + + +Y  +  G+++E+ YPY    G+K 
Sbjct: 88  HYRKTGKLVSLSEQNLLDCSKENMGCNGGLPQKAYKYIKENGGIDTEESYPYL---GKKE 144

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSE--TMKKILYKYGPLSVLLNSDL--IHDYNGTPIRKN 326
            C++  S+V   T   F+     +   +KK +   GP++V +++       Y G     +
Sbjct: 145 TCSFRPSEVGA-TCTGFVQVTAGDELALKKAVASVGPITVCIDASQPSFQLYKGGVY--D 201

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAG 385
           +++C+P    HAVL+VGYG      YWLV+NSWG     +G+  + R  NN CGI   A 
Sbjct: 202 EQSCNPIVFDHAVLIVGYGVYQGKDYWLVKNSWGTSWGMDGYIMMSRNQNNQCGIANHAV 261

Query: 386 YATI 389
           Y T+
Sbjct: 262 YPTV 265


>gi|218478062|dbj|BAH03397.1| cathepsin L-like cysteine peptidase [Taenia asiatica]
          Length = 338

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 168/376 (44%), Gaps = 56/376 (14%)

Query: 31  LCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKER-- 88
           +  P L   I   + A V+T A+          +   +  + ++ GR Y+  EE   R  
Sbjct: 2   IVTPFLLLLIIHPLAAVVETSAL-----LTERELSRQWIGWKLQHGRVYSEKEEAYRRGI 56

Query: 89  ----FEYFKQDGHKKH---ERY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKV 139
                 Y K    + +   E Y  G ++F+D    E   +       R   R    R ++
Sbjct: 57  FARNLLYIKGQNRRFNAGLESYSTGLNQFADLESSEFSERF---LGTRPESRAAGKRGRI 113

Query: 140 EKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQF 199
            K L        +PD  DWR KN+     +Q  CGSCWAFS  G                
Sbjct: 114 WKALASAAD---LPDTVDWRDKNLVTEVKNQGNCGSCWAFSSTGA--------------- 155

Query: 200 CLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESE 257
                   LEG +A KTGKL+  S+ QLV+C+ +    GC+G +   + +Y  +  +E E
Sbjct: 156 --------LEGAFAKKTGKLISLSEQQLVDCSLKNGNDGCNGGYMSYAFKYLEEHSIEPE 207

Query: 258 KDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLN-SDL 314
             YPY+  +G    C Y++S + + T  D      G+ET + + +   GP+S+ ++ S L
Sbjct: 208 SAYPYRATDG---PCRYNES-LGVGTVTDIGDIPEGNETALMEAVATVGPISIAIDASSL 263

Query: 315 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 374
              +    I K+   CS   L H VL +GYGKQ+  PYWLV+NSWG     +G+  + + 
Sbjct: 264 GFMFYRHGIYKS-HWCSSKFLNHGVLAIGYGKQEGKPYWLVKNSWGTRWGMKGYIMMAKD 322

Query: 375 -NNACGIEQIAGYATI 389
            +N CG+  +A +  +
Sbjct: 323 YHNMCGVASLADFPYV 338


>gi|410907221|ref|XP_003967090.1| PREDICTED: pro-cathepsin H-like [Takifugu rubripes]
          Length = 324

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 152/338 (44%), Gaps = 56/338 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERYGTS------EFSDRSPEEILCK 119
           F++++    + Y  D    +R + F ++  +  KH     S      ++SD +  E   +
Sbjct: 27  FRSWMALHNKAYVKD--FDQRLQVFTENKRRIDKHNEGNHSFAMRLNQYSDMTFAEF--R 82

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGSCWA 178
             F W+E   +   A +         ++ + P P++ DWRKK N   P  +Q +CGSCW 
Sbjct: 83  KHFLWAEP--QNCSATKGSY------IQTNSPHPESIDWRKKGNYVTPVKNQGSCGSCWT 134

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--G 236
           FS  G                        LE   AI +GKLV  S+ QLV+CA+  +  G
Sbjct: 135 FSTTG-----------------------CLESVTAINSGKLVPLSEQQLVDCAQDFNNHG 171

Query: 237 CDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG--S 293
           C+G     + EY  +  GL +E DYPY      + KC Y       F  K+ ++      
Sbjct: 172 CNGGLPSQAFEYIKYNKGLMTESDYPY---TAFEDKCTYKPELAAAFV-KNVVNITAYDE 227

Query: 294 ETMKKILYKYGPLSVL--LNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIP 351
           + M+  +    P+S    +  D +H  +G        T +   + HAVL VGYG ++  P
Sbjct: 228 KEMEDAVATRNPVSFAFEVTPDFMHYSSGVYSSSTCHTTTD-KVNHAVLAVGYGSENGTP 286

Query: 352 YWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YW+V+NSWGP    +G+F I RG N CG+   + +  +
Sbjct: 287 YWIVKNSWGPGWGQDGYFLIMRGKNMCGLAACSSFPEV 324


>gi|339246873|ref|XP_003375070.1| viral cathepsin [Trichinella spiralis]
 gi|316971622|gb|EFV55373.1| viral cathepsin [Trichinella spiralis]
          Length = 496

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 150/340 (44%), Gaps = 56/340 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFK---------QDGHKKHERYGTSEFSDRSPEEILC 118
           FK F+    + Y +++E+ +R++ FK         Q   +    YG + F+D +PEE   
Sbjct: 196 FKEFLKTFKKWYLSEKELLKRYDIFKVNMKTVEMLQKNEQGTAVYGVTFFADLTPEEF-- 253

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                   + Y      R+++ +    + K G + D WDWR+ N      +Q  CGSCWA
Sbjct: 254 -------RKFYLSPQWKRDQLPQRKASIPK-GKIEDRWDWREHNAVTEVKNQGMCGSCWA 305

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD 238
           F+                           +EG +A+K G+LV  S+ +LV+C     GC 
Sbjct: 306 FATIAN-----------------------VEGVWAVKKGELVSLSEQELVDCDTLDQGCS 342

Query: 239 GCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET 295
           G +  PS  Y       GL +E +Y Y   +G +  C +     K++   D +     ET
Sbjct: 343 GGY--PSNAYKEIIRLGGLTTETNYSY---DGNQGTCRFKTQNAKVYIN-DSVSLPEDET 396

Query: 296 -MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI---- 350
            +   + + GP++V +N+  +  Y           CSP  L H V +VGY  +       
Sbjct: 397 EIAAYIRENGPVAVGINAFAMMFYRHGIAHPWRFLCSPDALDHGVAIVGYDVEKQSKKPK 456

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
           PYW+++NSWG    + G++ + RG   CG+ ++   A ID
Sbjct: 457 PYWIIKNSWGTHWGEGGYYMLYRGAGVCGVNKMVTSAIID 496


>gi|255564910|ref|XP_002523448.1| cysteine protease, putative [Ricinus communis]
 gi|223537276|gb|EEF38907.1| cysteine protease, putative [Ricinus communis]
          Length = 341

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 161/354 (45%), Gaps = 60/354 (16%)

Query: 56  SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD----------GHKKHERYGT 105
           S +  +  + E  + ++VK GR Y ++ E + RFE F+ +          G++ + +   
Sbjct: 26  SRSLHDAAMNERHEMWMVKYGRVYKDNSEKERRFEIFRNNVEFIESFNKPGNRPY-KLDI 84

Query: 106 SEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           +EF+D + EE      FK S   Y+R  ++    EK          VP + DWR+K    
Sbjct: 85  NEFADLTNEE------FKASRNGYKR-SSNVGLSEKSSFRYGNVTAVPTSMDWRQKGAVT 137

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  DQ  CG CWAFS                           +EG   + TGKL+  S+ 
Sbjct: 138 PIKDQGQCGCCWAFSAVA-----------------------AMEGITKLSTGKLISLSEQ 174

Query: 226 QLVEC--AKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANG--EKFKCAYDKSKVK 280
           +LV+C  + +  GC+G   + + E+  Q  GL +E +YPY+  +G     K   D +K+ 
Sbjct: 175 ELVDCDTSGEDQGCEGGLMDDAFEFIKQNGGLTTEANYPYQGTDGTCNTNKAGNDAAKI- 233

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHA 338
             TG + +  N  + + K +    P+SV +++       Y+G     +  T    +L H 
Sbjct: 234 --TGYEDVPANSEDALLKAVASQ-PVSVAIDASGSAFQFYSGGVFTGDCGT----ELDHG 286

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 388
           V  VGYG  D   YWLV+NSWG    ++G+ ++ER   A    CGI   + Y T
Sbjct: 287 VTAVGYGTSDGTKYWLVKNSWGTSWGEDGYIRMERDIEAKEGLCGIAMQSSYPT 340


>gi|403364285|gb|EJY81901.1| Cathepsin H [Oxytricha trifallax]
          Length = 363

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 53/298 (17%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKM----------LMEVEKDGPVP 153
           G ++FSD + EE            ++ R+   RE  E+           L  + KD  +P
Sbjct: 89  GFNQFSDMTSEEFF----------SFYRLDEQRENAEQQCSATRAEAVDLSHIVKD--LP 136

Query: 154 DAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYA 213
             WDWR+ N   P  DQ +CGSCW FS  G                        LE  + 
Sbjct: 137 ANWDWREHNGVTPVKDQGSCGSCWTFSTVG-----------------------TLEAHFL 173

Query: 214 IKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKF 270
           IK  +    S+ QLV+CA      GC+G     + +Y +   G+ +E  YPY     +  
Sbjct: 174 IKYQQSRNLSEQQLVDCAGAYDNYGCNGGLPSHAFQYISDNGGIATEAAYPYF---AKDR 230

Query: 271 KCAYDKSKVKLFTGKDFLHFNGSETMKKI-LYKYGPLSVLLNS-DLIHDYNGTPIRKNDE 328
            C   +S+  +      ++   SE    I ++++GP+S+     D   DY+       D 
Sbjct: 231 PCTIQQSQKSVGVVGGSVNLTKSEDELAIAIFQHGPVSIAYEVIDDFMDYHSGVYTTKDC 290

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
              P D+ HAV+ VG+G ++ + YWLV+NSW     D G+FKI+RG N CGI     Y
Sbjct: 291 KNGPDDVNHAVVAVGFGTENGVDYWLVKNSWSTKWGDNGYFKIQRGVNMCGINNCNSY 348


>gi|225706086|gb|ACO08889.1| Cathepsin S precursor [Osmerus mordax]
          Length = 333

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 128/282 (45%), Gaps = 40/282 (14%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G +   D + EEIL             ++ AD ++ E          PVPD  DWR+K  
Sbjct: 78  GMNHMGDMTEEEIL-------QSFASLKVPADLKR-EPSAFVASSGTPVPDTVDWRQKGY 129

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                +Q +CGSCWAFS  G                        LEGQ    TGKL++ S
Sbjct: 130 VTQVKNQGSCGSCWAFSSVGA-----------------------LEGQLMRTTGKLLDLS 166

Query: 224 KSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS-KV 279
              LV+C+ +    GC+G F   + +Y     G++S+  YPY+   G    C Y+ S + 
Sbjct: 167 PQNLVDCSSKYGNKGCNGGFMSEAFQYVIDNKGIDSDTSYPYQGVQG---TCHYNPSYRS 223

Query: 280 KLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
              T   FL      T+K+ +   GP+SV +++             ND TC+   + HAV
Sbjct: 224 ANCTRYSFLPEGDETTLKQAVAMIGPISVAIDATRPSFILWRSGVYNDLTCTQ-KINHAV 282

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
           L+VGYG  D   YWLV+NSWG    + G+ ++ R  NN CGI
Sbjct: 283 LVVGYGTLDGQDYWLVKNSWGTRFGENGYIRMSRNRNNQCGI 324


>gi|391341652|ref|XP_003745141.1| PREDICTED: counting factor associated protein D-like [Metaseiulus
           occidentalis]
          Length = 751

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 167/375 (44%), Gaps = 51/375 (13%)

Query: 30  CLCLPSLTDRITDQVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF 89
           C  LP+ +     Q  AR     I   ++ ++ ++ E F  F    G+ Y +  E ++R 
Sbjct: 413 CTKLPTAS-----QSSARHLFDPIREFVSNNDSHVDEHFAEFKNTHGKAYESASEDRKRR 467

Query: 90  EYFKQ------DGHKKHERYGTS--EFSDRSPEEILCKTGFKWSERTYERIVADREKVEK 141
             F          ++++  Y  +  E SD+S +E+  + G         ++      ++ 
Sbjct: 468 HNFHHKMRFVNSMNRRNLSYALALNERSDQSRDEVSSQGGCL----RIPKVPNAPSDLQT 523

Query: 142 MLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL 201
              E      +PD  DWR + V  P  +Q  CGSC++F+                     
Sbjct: 524 FSAETCDTAGIPDTVDWRLEGVVTPVKNQGTCGSCYSFASVA------------------ 565

Query: 202 LIFPGMLEGQYAIKTGK--LVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESE 257
                 LE QY I+ GK     FS+ Q+V+C+      GC G F   + EY  + GL +E
Sbjct: 566 -----YLESQYIIRNGKGNTTRFSEQQIVDCSWDSLNIGCKGGFPHGAFEYVQKYGLFTE 620

Query: 258 KDY-PYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDL 314
             Y PY +  G K + A  K +  + T K F    G+E + + +  +GP++V ++  SD 
Sbjct: 621 DQYGPYLDDEG-KCRDAEMKGEPIIPTLKSFTMMEGAECLLRHVGLHGPIAVGIHGSSDS 679

Query: 315 IHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG 374
              Y+      ND TC  + L HAVL+VGYG     PYWLV+NSWGP    EG+  + R 
Sbjct: 680 FRAYSRGIY--NDPTCD-HSLTHAVLVVGYGSLRGEPYWLVKNSWGPKWGAEGYILVSRK 736

Query: 375 NNACGIEQIAGYATI 389
            N CGIE    +A +
Sbjct: 737 ENYCGIENYLAFAEL 751


>gi|2914594|pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent
           Vinyl Sulfone Inhibitor
 gi|28374044|pdb|1NL6|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374045|pdb|1NL6|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374047|pdb|1NLJ|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|28374048|pdb|1NLJ|B Chain B, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Azepanone Inhibitor
 gi|47168617|pdb|1Q6K|A Chain A, Cathepsin K Complexed With T-butyl(1s)-1-cyclohexyl-2-
           Oxoethylcarbamate
 gi|55670045|pdb|1TU6|A Chain A, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|55670046|pdb|1TU6|B Chain B, Cathepsin K Complexed With A Ketoamide Inhibitor
 gi|62738654|pdb|1YK7|A Chain A, Cathepsin K Complexed With A Cyanopyrrolidine Inhibitor
 gi|73535690|pdb|1YK8|A Chain A, Cathepsin K Complexed With A Cyanamide-Based Inhibitor
 gi|73535721|pdb|1YT7|A Chain A, Cathepsin K Complexed With A Constrained Ketoamide
           Inhibitor
 gi|93278849|pdb|2BDL|A Chain A, Cathepsin K Complexed With A Pyrrolidine Ketoamide-Based
           Inhibitor
 gi|114793438|pdb|2ATO|A Chain A, Crystal Structure Of Human Cathepsin K In Complex With
           Myocrisin
 gi|114793448|pdb|2AUX|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|114793451|pdb|2AUZ|A Chain A, Cathepsin K Complexed With A Semicarbazone Inhibitor
 gi|126030469|pdb|2FTD|A Chain A, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|126030470|pdb|2FTD|B Chain B, Crystal Structure Of Cathepsin K Complexed With 7-Methyl-
           Substituted Azepan-3-One Compound
 gi|157830076|pdb|1ATK|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With The Covalent Inhibitor E-64
 gi|157830085|pdb|1AU0|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Symmetric Diacylaminomethyl
           Ketone Inhibitor
 gi|157830086|pdb|1AU2|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Propanone Inhibitor
 gi|157830087|pdb|1AU3|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830088|pdb|1AU4|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin
           K In Complex With A Covalent Pyrrolidinone Inhibitor
 gi|157830146|pdb|1AYU|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Symmetric Biscarbohydrazide
           Inhibitor
 gi|157830147|pdb|1AYV|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Thiazolhydrazide Inhibitor
 gi|157830148|pdb|1AYW|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent
           Benzyloxybenzoylcarbohydrazide Inhibitor
 gi|157830300|pdb|1BGO|A Chain A, Crystal Structure Of Cysteine Protease Human Cathepsin K
           In Complex With A Covalent Peptidomimetic Inhibitor
 gi|197305045|pdb|3C9E|A Chain A, Crystal Structure Of The Cathepsin K : Chondroitin Sulfate
           Complex.
 gi|290560385|pdb|3KW9|A Chain A, X-Ray Structure Of Cathepsin K Covalently Bound To A
           Triazine Ligand
 gi|290560386|pdb|3KWZ|A Chain A, Cathepsin K In Complex With A Non-Selective 2-Cyano-
           Pyrimidine Inhibitor
 gi|290560387|pdb|3KX1|A Chain A, Cathepsin K In Complex With A Selective 2-Cyano-Pyrimidine
           Inhibitor
 gi|293651910|pdb|3KWB|X Chain X, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|293651911|pdb|3KWB|Y Chain Y, Structure Of Catk Covalently Bound To A Dioxo-Triazine
           Inhibitor
 gi|308198615|pdb|3O1G|A Chain A, Cathepsin K Covalently Bound To A 2-Cyano Pyrimidine
           Inhibitor With A Benzyl P3 Group.
 gi|327200584|pdb|3O0U|A Chain A, Cathepsin K Covalently Bound To A Cyano-Pyrimidine
           Inhibitor With Improved Selectivity Over Herg
 gi|394986262|pdb|4DMX|A Chain A, Cathepsin K Inhibitor
 gi|394986263|pdb|4DMY|A Chain A, Cathepsin K Inhibitor
 gi|394986264|pdb|4DMY|B Chain B, Cathepsin K Inhibitor
          Length = 215

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 119/241 (49%), Gaps = 29/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD+ D+RKK    P  +Q  CGSCWAFS  G                        LEGQ
Sbjct: 1   APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQ 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKF 270
              KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++ 
Sbjct: 38  LKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEE 94

Query: 271 KCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
            C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     DE+
Sbjct: 95  SCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDES 154

Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYAT 388
           C+  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  
Sbjct: 155 CNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPK 214

Query: 389 I 389
           +
Sbjct: 215 M 215


>gi|351724281|ref|NP_001237820.1| cysteine protease-like precursor [Glycine max]
 gi|149393486|gb|ABR26679.1| putative cysteine protease [Glycine max]
          Length = 355

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 145/331 (43%), Gaps = 40/331 (12%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 127
           F  F+ + G+ Y ++EE++ER+E F Q+      R+  S   +R P  +       W+  
Sbjct: 55  FARFMSRFGKSYRSEEEMRERYEIFSQN-----LRFIRSHNKNRLPYTLSVNHFADWTWE 109

Query: 128 TYER-IVADREKVEKMLMEVEK--DGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGK 184
            ++R  +   +     L    K  D  +P   DWRK+ +     DQ +CGSCW FS  G 
Sbjct: 110 EFKRHRLGAAQNCSATLNGNHKLTDAVLPPTKDWRKEGIVSDVKDQGSCGSCWTFSTTGA 169

Query: 185 FSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFF 242
                                  LE   A   GK +  S+ QLV+CA + +  GC+G   
Sbjct: 170 -----------------------LEAACAQAFGKSISLSEQQLVDCAGRFNNFGCNGGLP 206

Query: 243 EPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSET-MKKIL 300
             + EY  +  GLE+E+ YPY   +G    C +    V +          G+E  +K  +
Sbjct: 207 SQAFEYIKYNGGLETEEAYPYTGKDG---VCKFSAENVAVQVIDSVNITLGAENELKHAV 263

Query: 301 YKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSW 359
               P+SV     +  H Y       +    +  D+ HAVL VGYG ++ +PYWL++   
Sbjct: 264 AFVRPVSVAFQVVNGFHFYENGVYTSDICGSTSQDVNHAVLAVGYGVENGVPYWLIKKFM 323

Query: 360 G-PIGPDEGFFKIERGNNACGIEQIAGYATI 389
           G  +G + G  K+E G N CG+   A Y  +
Sbjct: 324 GEKVGVENGLLKLELGKNMCGVATCASYPVV 354


>gi|313235882|emb|CBY11269.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 161/352 (45%), Gaps = 65/352 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD-----GHKKHE----RYGTSEFSDRSPEEILC 118
           F+ F+++  + Y+ ++E   RF+ F ++      H   E    +YG +EF+D S  E   
Sbjct: 50  FENFLLEHPKMYS-EQESHSRFQTFWENLKRIKFHNHIEQGSAKYGVTEFADLSDFEF-- 106

Query: 119 KTGFKWSERTY-----ERIVADREKVEKMLMEVEKD----GPVPDAWDWRKKNVTGPAGD 169
                   R Y     E  + +R+K E+      K       V + +DW +K       +
Sbjct: 107 -------RRHYLGLKPELKIPNRKKYERKSRNSSKKLKFAKTVDETFDWVEKGAVTEVKN 159

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAFS  G                        +EG +   TG LV  S+ +LV+
Sbjct: 160 QGMCGSCWAFSTTGN-----------------------IEGAWFKATGDLVSLSEQELVD 196

Query: 230 CAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
           C ++ SGC+G   + + E   +  GLE+E+ YPY   +G +  C ++KS  K+    DF+
Sbjct: 197 CDQKDSGCNGGLMDQAFEEVIRIGGLETEQQYPY---DGVQETCNFEKSLSKVQI-DDFM 252

Query: 289 HFNGSETMKKILYK-YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
                E       + +GPLS+ +N+  +  Y G         CS   L H VL+VGYG +
Sbjct: 253 DIGEDEEEIAEALEEHGPLSIAINAFGMQFYRGGISHPLSFLCSQDGLDHGVLMVGYGVE 312

Query: 348 DNI--------PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATIDV 391
            +         PYW ++NSWGP   ++G++++ RG   CG+ ++   + ++ 
Sbjct: 313 HHTTWRHRHPRPYWKIKNSWGPRWGEDGYYRVARGKGVCGVNKMVSTSIVNA 364


>gi|2780176|emb|CAA71085.1| cystein proteinase [Leishmania mexicana]
          Length = 443

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 45/324 (13%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F    GR Y    E ++R   F+++            H ++G ++F D S  E   +
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               +         A R   +           VPDA DWR+K    P  +Q ACGSCWAF
Sbjct: 98  ----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAF 153

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDG 239
           S  G                        +EGQ+ +   +LV  S+ QLV C    +GC G
Sbjct: 154 SAVGN-----------------------IEGQWYLAGHELVSLSEQQLVSCDDMDNGCSG 190

Query: 240 CFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS--E 294
                + ++  Q     L +E  YPY + NG   +C+ + S++ +    D     GS  +
Sbjct: 191 GLMLQAFDWLLQNTNGHLYTEDSYPYVSGNGYVPECS-NSSELVVGAQIDGHVLIGSSEK 249

Query: 295 TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWL 354
            M   L K GP+++ L++     Y    +      C    L H VLLVGY     +PYW+
Sbjct: 250 AMAAWLAKNGPIAIALDASSFMSYKSGVL----TACIGKQLNHGVLLVGYDMTGEVPYWV 305

Query: 355 VRNSWGPIGPDEGFFKIERGNNAC 378
           ++NSWG    ++G+ ++  G NAC
Sbjct: 306 IKNSWGGDWGEQGYVRVVMGVNAC 329


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 153/345 (44%), Gaps = 74/345 (21%)

Query: 72  IVKRGRQYANDEEIKERFEYFKQD---------GHKKHERYGTSEFSDRSPEEILCKTGF 122
           +VK  + Y      ++RFE FK +         G  +  + G ++F+D S EE   K+ F
Sbjct: 11  LVKHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEY--KSMF 68

Query: 123 KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIA 182
                   R+V DR+  E    +      +P + DWR+K    P  DQ  CGSCWAFS  
Sbjct: 69  LGG-----RMVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTV 123

Query: 183 GKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS-GCDGCF 241
                                    +EG   I TG L+  S+ +LV+C K  + GC+G F
Sbjct: 124 A-----------------------AVEGINQIATGDLISLSEQELVDCDKGFNQGCNGGF 160

Query: 242 FEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--LHFNGSETMKK 298
            + + E+     G+++E DYPYK  +G+   C  ++   K+ T   F  +  N  +++KK
Sbjct: 161 MDYAFEFIVKNGGIDTEDDYPYKGVDGQ---CDQNRKNAKVVTINGFEDVPQNDEKSLKK 217

Query: 299 ILYKYGPLSV----------LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
            +  + P+SV          L  S + +   GT            DL H V+ VGYG +D
Sbjct: 218 AV-AHQPVSVAIEAGGRAFQLYESGIFNGLCGT------------DLDHGVVAVGYGTED 264

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIER-----GNNACGIEQIAGYAT 388
              YW+VRNSWGP   + G+ ++ER         CGI     Y T
Sbjct: 265 GKDYWIVRNSWGPNWGENGYIRLERNVASTNTGKCGIAMQPSYPT 309


>gi|6630974|gb|AAF19631.1|AF194427_1 cysteine proteinase precursor [Myxine glutinosa]
          Length = 324

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 146/326 (44%), Gaps = 47/326 (14%)

Query: 73  VKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERI 132
           V R R + ++ +I ++       G   + R G + ++D   EE +   G          +
Sbjct: 37  VLRKRVWESNLQIVQQHNVLADQGQANY-RLGMNTYADLYNEEFMALKGSG-------GL 88

Query: 133 VADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQY 192
           +  ++K      +      +P + DWR +    P  DQ  CGSCW FS  G         
Sbjct: 89  LQAKDKSSTQTFKPLVGVTLPSSVDWRNQGYVTPVKDQGQCGSCWTFSATGS-------- 140

Query: 193 LNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH 250
                          LEGQ+  KTG L+  S+ QLV+CA +    GC+G   E + +Y  
Sbjct: 141 ---------------LEGQHFAKTGNLLSLSEQQLVDCAGRYGNYGCNGGLMESAYDYIK 185

Query: 251 Q-AGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLHFNGSETMKKILYKYGPLSV 308
              G+E E  YPY   +G   +C +D+SKV     G   +     + + + +   GP++V
Sbjct: 186 GVGGVELESAYPYTARDG---RCKFDRSKVVATCKGYVVIPVGDEQALMQAVGTIGPVAV 242

Query: 309 LLNSD----LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 364
            +++      +++      R+    CS  +L H VL VGYG +    YWLV+NSWGP   
Sbjct: 243 SIDASGYSFQLYESGVYDFRR----CSSTNLDHGVLAVGYGTEGGQNYWLVKNSWGPGWG 298

Query: 365 DEGFFKIERG-NNACGIEQIAGYATI 389
           D+G+ K+ +  NN CGI   + Y  +
Sbjct: 299 DQGYIKMSKDKNNQCGIATDSCYPLV 324


>gi|163310848|pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola
           Hepatica
          Length = 310

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 112/239 (46%), Gaps = 35/239 (14%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+        DQ  CGS WAFS  G                        +EGQ
Sbjct: 92  VPDKIDWRESGYVTEVKDQGNCGSGWAFSTTG-----------------------TMEGQ 128

Query: 212 YAIKTGKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
           Y       + FS+ QLV+C++    +GC G   E + +Y  Q GLE+E  YPY    G+ 
Sbjct: 129 YMKNERTSISFSEQQLVDCSRPWGNNGCGGGLMENAYQYLKQFGLETESSYPYTAVEGQ- 187

Query: 270 FKCAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKN 326
             C Y+K   V   TG   +H      +K ++   GP +V ++  SD +   +G      
Sbjct: 188 --CRYNKQLGVAKVTGFYTVHSGSEVELKNLVGAEGPAAVAVDVESDFMMYRSGI---YQ 242

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            +TCSP  + HAVL VGYG Q    YW+V+NSWG    + G+ ++ R   N CGI  +A
Sbjct: 243 SQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRGNMCGIASLA 301


>gi|2961621|gb|AAC05781.1| cathepsin S [Mus musculus]
          Length = 340

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 135 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 171

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 172 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKATDE---KCHYN-SK 227

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 228 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 286

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 287 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340


>gi|62510452|sp|Q8HY81.1|CATS_CANFA RecName: Full=Cathepsin S; Flags: Precursor
 gi|27497538|gb|AAO13009.1| cathepsin S preproprotein [Canis lupus familiaris]
          Length = 331

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 131/292 (44%), Gaps = 42/292 (14%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 76  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 126

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LE Q  +KTGKLV  S
Sbjct: 127 VTEVKYQGSCGACWAFSAVGA-----------------------LEAQLKLKTGKLVSLS 163

Query: 224 KSQLVECAKQ---CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV 279
              LV+C+ +     GC+G F   + +Y     G++SE  YPYK  NG   KC YD  K 
Sbjct: 164 AQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKR 220

Query: 280 KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
                K   L F   + +K+ +   GP+SV +++     +        + +C+  ++ H 
Sbjct: 221 AATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHG 279

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           VL+VGYG  +   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 280 VLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331


>gi|23110964|ref|NP_001326.2| cathepsin W preproprotein [Homo sapiens]
 gi|29476894|gb|AAH48255.1| Cathepsin W [Homo sapiens]
 gi|119594870|gb|EAW74464.1| cathepsin W (lymphopain), isoform CRA_b [Homo sapiens]
          Length = 376

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 151/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|348531519|ref|XP_003453256.1| PREDICTED: cathepsin L-like [Oreochromis niloticus]
          Length = 334

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 37/297 (12%)

Query: 99  KHERYGTSEFSDRSPEEI--LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAW 156
           K  R G + F+D   EE   L   G      T+   + +R       + + +   +PD  
Sbjct: 69  KSYRLGMTHFADMDNEEYKQLVSQG---CLHTFNASLPERGSA---FLGLPEGTALPDTV 122

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR K       DQ  CGSCWAFS  G                       +LEGQ+  KT
Sbjct: 123 DWRDKGYVTEVKDQKQCGSCWAFSTTG-----------------------VLEGQHFRKT 159

Query: 217 GKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCA 273
           GKLV  S+ QL++C+     +GC+G   + +++Y     G+++E  YPYK A G++ +  
Sbjct: 160 GKLVSLSEQQLMDCSHSFGNNGCNGGSVKRALQYIQANGGIDTETSYPYK-AKGQRCRYK 218

Query: 274 YDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
            D    K  TG   +  +  ET+KK +   GP+SV +++             +D  CS  
Sbjct: 219 PDGIGAKC-TGYVHVKPSNEETLKKAVATLGPISVGIDASRHSFQFYQSGVYDDPDCSKT 277

Query: 334 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            L H  L VGYG ++   YWL++NSWG    D+G+ K+ R  +N CGI   A Y  +
Sbjct: 278 VLDHGALAVGYGTENGHDYWLIKNSWGLRWGDKGYIKMSRNKSNQCGIASEASYPLV 334


>gi|44844204|emb|CAF32698.1| cysteine proteinase [Leishmania infantum]
          Length = 443

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 140/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWR+K    P     ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKXXGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A     LV  S+ QLV C  + +G
Sbjct: 151 WAFSAVGN-----------------------IESQWARAGHGLVSLSEQQLVSCDDKDNG 187

Query: 237 CDGCFFEPSIE--YTHQAGLE-SEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C+G     + E    H  G+  +EK YPY + NG+  +C      V       ++    +
Sbjct: 188 CNGGLMLQAFEXLLRHMYGIVFTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSN 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L + GP+++ +++     Y    +     +C+   L H VLLVGY K   +PY
Sbjct: 248 ETVMAAWLAENGPIAIAVDASSFMSYQSGVL----TSCAGDALNHGVLLVGYNKTGGVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    ++G+ ++  G NAC
Sbjct: 304 WVIKNSWGEDWGEKGYVRVVMGXNAC 329


>gi|42564159|gb|AAS20591.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 147/334 (44%), Gaps = 46/334 (13%)

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 123
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS   
Sbjct: 85  DELR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSAT- 140

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD---GC 240
                                 G LEGQ AI     +  S+ QL++C+K     D   G 
Sbjct: 141 ----------------------GALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGG 178

Query: 241 FFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKIL 300
               + +Y    G+E++  YPYK   G    C YD  K  L         N  E +KK +
Sbjct: 179 LMSFAFDYVLDKGIEADSSYPYK---GIDTPCQYDAKKTVLKIKGYKNVSNSEEELKKAV 235

Query: 301 YKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLVR 356
              GP+SV +++D I  Y G  +   D     ++L H VL VGYG++D++     +W V+
Sbjct: 236 GTVGPVSVAIDADPIQLYFGGIL---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKVK 292

Query: 357 NSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           NSWG    ++G+F+I+R  NN CGI   A Y  +
Sbjct: 293 NSWGKDWGEQGYFRIKRDANNLCGIADKASYPIL 326


>gi|224049669|ref|XP_002196637.1| PREDICTED: cathepsin O [Taeniopygia guttata]
          Length = 299

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 137/284 (48%), Gaps = 46/284 (16%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKML-MEVEKDGPVPDAWDWRKK 161
           YG ++FS   PEE          +  Y R +    K+ + + +   K+ P+P  +DWR K
Sbjct: 47  YGINQFSHLFPEEF---------KAIYLRSIP--HKLPRYIKVPKGKEKPLPKKFDWRDK 95

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
            V     +Q  CG CWAFS+ G                        +E  YAIK   L E
Sbjct: 96  KVIAEVRNQQTCGGCWAFSVVGG-----------------------IESAYAIKRNTLEE 132

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKD--YPYKNANGEKFKCAY-DKSK 278
            S  Q+++C+    GC+G     ++ + +Q  ++  +D  Y +K   G    C Y ++S 
Sbjct: 133 LSVQQVIDCSYNNYGCNGGSTVSALSWLNQTKVKLVRDSEYTFKAQTG---LCHYFERSD 189

Query: 279 VKL-FTGKDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
             +  TG     F+G E  M ++L  +GPL+V +++    DY G  I+ +   CS     
Sbjct: 190 FGVSITGFAAYDFSGQEEEMMRMLVSWGPLAVTVDAVSWQDYLGGIIQYH---CSSGRAN 246

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           HAVL+ G+ +  +IPYW+V+NSWGP    +G+ +++ G N CGI
Sbjct: 247 HAVLITGFDRTGSIPYWIVQNSWGPTWGIDGYVRVKMGGNVCGI 290


>gi|170784978|pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine
           Protease Of T. Brucei Rhodesiense, Bound To Inhibitor
           K777
 gi|171848756|pdb|2P86|A Chain A, The High Resolution Crystal Structure Of Rohedsain, The
           Major Cathepsin L Protease From T. Brucei Rhodesiense,
           Bound To Inhibitor K11002
          Length = 215

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 110/241 (45%), Gaps = 30/241 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            P A DWR+K    P  DQ  CGSCWAFS  G                        +EGQ
Sbjct: 1   APAAVDWREKGAVTPVKDQGQCGSCWAFSTIGN-----------------------IEGQ 37

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGE 268
           + +    LV  S+  LV C     GC G   + +  +   ++   + +E  YPY + NGE
Sbjct: 38  WQVAGNPLVSLSEQMLVSCDTIDFGCGGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGE 97

Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
           + +C  +  ++              + +   L + GPL++ +++    DYNG  +     
Sbjct: 98  QPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYNGGILT---- 153

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
           +C+   L H VLLVGY    N PYW+++NSW  +  ++G+ +IE+G N C + Q    A 
Sbjct: 154 SCTSEQLDHGVLLVGYNDASNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSSAV 213

Query: 389 I 389
           +
Sbjct: 214 V 214


>gi|50513589|pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized
           Norleucine Aldehyde
          Length = 214

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 29/240 (12%)

Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
           PD+ D+RKK    P  +Q  CGSCWAFS  G                        LEGQ 
Sbjct: 1   PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQL 37

Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFK 271
             KTGKL+  S   LV+C  +  GC G +   + +Y  +  G++SE  YPY    G++  
Sbjct: 38  KKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYV---GQEES 94

Query: 272 CAYDKS-KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC 330
           C Y+ + K     G   +     + +K+ + + GP+SV +++ L      +     DE+C
Sbjct: 95  CMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESC 154

Query: 331 SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           +  +L HAVL VGYG Q    +W+++NSWG    ++G+  + R  NNACGI  +A +  +
Sbjct: 155 NSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 214


>gi|328789602|ref|XP_623690.2| PREDICTED: cathepsin O-like [Apis mellifera]
          Length = 368

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 171/392 (43%), Gaps = 68/392 (17%)

Query: 21  VFLLCGVASCLCLPSLTDRITDQV-VARVDTLAIEGSLTFDNENILETFKAFIVKRGRQY 79
           + L C    CL L      I   + V  +  LAI   +  DN   ++ F+ ++++  + Y
Sbjct: 3   LLLYCASELCLTLDMEWKTIVFTILVVSLCFLAIPIKVDPDNNEDIKLFQNYVIRYNKSY 62

Query: 80  AND-EEIKERFEYFKQD-----------GHKKHERYGTSEFSDRSPEEILCKT------- 120
            N+  E +ERF+ F++              ++   YG +EFSD S  E L  T       
Sbjct: 63  RNNPSEYEERFKRFQRSLQHIERMNGLRSSQESAYYGLTEFSDMSENEFLLHTLLPDLPI 122

Query: 121 -GFKWSERTYER---IVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
            G K    +Y R   I  DR K         +   +P  +DWR K V  P   Q +CG+C
Sbjct: 123 RGEKHMNASYHRKHQISIDRMK---------RSISIPLRFDWRDKGVITPVRSQGSCGAC 173

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ--- 233
           WAFS                          ++E  +AIK G L   S  ++++CAK    
Sbjct: 174 WAFSTIE-----------------------VIESMFAIKNGTLHSLSVQEMIDCAKNSNF 210

Query: 234 -CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS---KVKLFTGKDFL 288
            C G D C     +  +    L+ E  YP     G  K     DK+   K++ FT   F+
Sbjct: 211 GCEGGDICSLLSWLLISKVQILQ-ESIYPLVGMTGTCKLGKMTDKTFNIKIQDFTCDSFV 269

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +  + +   L  +GP++  +N+    +Y G  I+ + +  S  +L HAV ++GY K  
Sbjct: 270 --DAEDELLIALATHGPVAAAVNALSWQNYLGGVIQYHCDG-SFNNLNHAVQIIGYDKSV 326

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            +P+++++NSWG    D+G+  I  GNN CGI
Sbjct: 327 AVPHYIIKNSWGSNFGDKGYMYIGIGNNLCGI 358


>gi|2582045|gb|AAB82449.1| lymphopain [Homo sapiens]
 gi|2582181|gb|AAB82457.1| lymphopain [Homo sapiens]
 gi|3033547|gb|AAC32181.1| cathepsin W [Homo sapiens]
          Length = 376

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 151/356 (42%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP + DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVHELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++       +C + K   K+   +DF+   N  
Sbjct: 190 GCHGGFVWDAFITVLNNSGLASEKDYPFQ-GKVRAHRC-HPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G   +    
Sbjct: 248 HRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGI 307

Query: 350 ----------------IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 WAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|354622947|ref|NP_001002938.2| cathepsin S precursor [Canis lupus familiaris]
          Length = 339

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 131/292 (44%), Gaps = 42/292 (14%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G +   D + EE++   G       ++R V  R    + L         PD+ DWR+K  
Sbjct: 84  GMNHLGDMTGEEVISLMGSLRVPSQWQRNVTYRSNSNQKL---------PDSVDWREKGC 134

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LE Q  +KTGKLV  S
Sbjct: 135 VTEVKYQGSCGACWAFSAVGA-----------------------LEAQLKLKTGKLVSLS 171

Query: 224 KSQLVECAKQ---CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKV 279
              LV+C+ +     GC+G F   + +Y     G++SE  YPYK  NG   KC YD  K 
Sbjct: 172 AQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNG---KCRYDSKKR 228

Query: 280 KLFTGK-DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHA 338
                K   L F   + +K+ +   GP+SV +++     +        + +C+  ++ H 
Sbjct: 229 AATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQ-NVNHG 287

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           VL+VGYG  +   YWLV+NSWG    D+G+ ++ R + N CGI     Y  I
Sbjct: 288 VLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 339


>gi|42564161|gb|AAS20592.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 152/335 (45%), Gaps = 48/335 (14%)

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHK------KHERYGTSEFSDRSPEEILCKTGFK 123
           AF    G+ Y +  E + RF  F+ +  K      K+++   S F   +P   L    FK
Sbjct: 25  AFKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFK 84

Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
              R   R +  +  VE  L    +   VPD+ DW +K        Q  CGSCWAFS   
Sbjct: 85  DKLR---RQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSAT- 140

Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCD---GC 240
                                 G LEGQ AI     +  S+ QL++C+K     D   G 
Sbjct: 141 ----------------------GALEGQNAIVNNVKIPLSEQQLLDCSKPYGNDDCEHGG 178

Query: 241 FFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS-ETMKKI 299
               + +Y    G+E++  YPYK   G    C YD  K  L   K + + + S E +KK 
Sbjct: 179 LMSFAFDYVLDKGIEADSSYPYK---GIDTPCQYDAKKTVLKI-KGYRNVSISEEELKKA 234

Query: 300 LYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI----PYWLV 355
           +   GP+SV +++D I  Y+G  +   D     ++L H VL VGYG++D++     +W V
Sbjct: 235 VGTVGPVSVAIDADPIQLYSGGIL---DGLFCTHNLNHGVLAVGYGEEDHLFGKKKFWKV 291

Query: 356 RNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
           +NSWG    ++G+F+I+R  NN CGI   A Y  +
Sbjct: 292 KNSWGKDWGEQGYFRIKRDANNLCGIADKASYPIL 326


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 58/349 (16%)

Query: 59  FDNENIL-ETFKAFIVKRGRQYANDEEIKERFEYFKQD----GHKKHER---YGTSEFSD 110
            ++EN+L E F A+  K G+ Y + E+   RF  +K +     H +  R    G ++F+D
Sbjct: 44  LEHENLLLEQFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYIRHSETNRTYSLGLTKFAD 103

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGD 169
            + EE           R Y     DR +  K        D   P++ DWRK        D
Sbjct: 104 LTNEEF---------RRMYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKD 154

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q +CGSCWAFS  G                        +EG  AI+ G+ V  S+ +LV+
Sbjct: 155 QGSCGSCWAFSAVGS-----------------------VEGINAIRNGEAVSLSEQELVD 191

Query: 230 CAKQCS-GCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKLFT--GK 285
           C  + + GC+G   + + ++  Q  G+++EKDYPYK  +G   +C   K    + T  G 
Sbjct: 192 CDLEYNQGCNGGLMDYAFDFIIQNGGIDTEKDYPYKGFDG---RCDNSKKNAHVVTIDGY 248

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           + +  N  E +KK +    P+SV + +    D+           C   DL H VL VGYG
Sbjct: 249 EDVPENDEEALKKAVAGQ-PVSVAIEAGG-RDFQLYAQGVFSGECGT-DLDHGVLAVGYG 305

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIER-------GNNACGIEQIAGYA 387
            +D + YW+V+NSWG    + G+ +++R       G   CGI     YA
Sbjct: 306 TEDGVDYWIVKNSWGEYWGESGYLRMKRNMKDSNDGPGLCGINIEPSYA 354


>gi|228245|prf||1801240C Cys protease 3
          Length = 321

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 150/341 (43%), Gaps = 55/341 (16%)

Query: 67  TFKAFIVKRGRQYANDEEIKERFEYFKQ------DGHKKHE------RYGTSEFSDRSPE 114
           ++  F  + GR+Y + +E   R   F+Q      D +KK E      +   ++F D + E
Sbjct: 18  SWDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNE 77

Query: 115 EI-LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           E      G+K   R   + V   E             P+    DWR K +  P  DQ  C
Sbjct: 78  EFNAVMKGYKKGSRGEPKAVFTAEGR-----------PMARDVDWRTKALVTPVKDQEQC 126

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        LEGQ+ +K  +LV  S+ QLV+C+  
Sbjct: 127 GSCWAFSATG-----------------------ALEGQHFLKNDELVSLSEQQLVDCSTD 163

Query: 234 CS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLFTGKDFLH 289
               GC G +   + +Y     G+++E  YPY+    E   C +D + +  + TG   + 
Sbjct: 164 YGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE---AEDRSCRFDANSIGAICTGSVEIV 220

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            +  E +++ +   GP+SV +++        +     ++ CSP  L H VL VGYG +  
Sbjct: 221 QHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTEST 280

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
             YWLV+NSWG    D G+ K+ R  +N CGI     Y T+
Sbjct: 281 KDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEPSYPTV 321


>gi|2746723|gb|AAB94925.1| cathepsin S precursor [Mus musculus]
          Length = 340

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 134/294 (45%), Gaps = 45/294 (15%)

Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
           G ++  D + EEI C+ G     R   + V  R    + L         PD  DWR+K  
Sbjct: 84  GMNDMGDMTNEEISCRMGALRISRQSPKTVTFRSYSNRTL---------PDTVDWREKGC 134

Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
                 Q +CG+CWAFS  G                        LEGQ  +KTGKL+  S
Sbjct: 135 VTEVKYQGSCGACWAFSAVGA-----------------------LEGQLKLKTGKLISLS 171

Query: 224 KSQLVECAKQ----CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSK 278
              LV+C+ +      GC G +   + +Y     G+E++  YPYK  +    KC Y+ SK
Sbjct: 172 AQNLVDCSNEEKYGNKGCGGGYMTEAFQYIIDNGGIEADASYPYKAMDE---KCHYN-SK 227

Query: 279 VKLFTGKDFLH--FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            +  T   ++   F   + +K+ +   GP+SV +++     +       +D +C+  ++ 
Sbjct: 228 NRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTG-NVN 286

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           H VL+VGYG  D   YWLV+NSWG    D+G+ ++ R N N CGI     Y  I
Sbjct: 287 HGVLVVGYGTLDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCSYPEI 340


>gi|37788267|gb|AAO64473.1| cathepsin H precursor [Fundulus heteroclitus]
          Length = 345

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 116/242 (47%), Gaps = 40/242 (16%)

Query: 149 DGPVPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
           +GP PD+ DWRKK N   P   Q +CGSCW FS  G                        
Sbjct: 125 EGPQPDSIDWRKKGNYITPVKTQGSCGSCWTFSTTG-----------------------C 161

Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEY-THQAGLESEKDYPYKN 264
           LE   AI T KLV  S+ QLV+CA+  +  GC+G     + EY  +  GL +E+DYPYK 
Sbjct: 162 LESVTAIATVKLVPLSEQQLVDCAQDFNNHGCNGGLPSQAFEYIMYNKGLMTEQDYPYKF 221

Query: 265 ANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKI--LYKYGPLSVL--LNSDLIHDYNG 320
             G    C+Y  S    F  K+  +    + M  +  +    P+S    +  D +H   G
Sbjct: 222 VEG---ICSYKPSLAAAFV-KEVRNITAYDEMGMVDAVGTLNPVSFAFEVTDDFMHYREG 277

Query: 321 TPIRKNDETC--SPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
                   TC  +   + HAVL VGYG++   PYW+V+NSWG     +G+F IERG N C
Sbjct: 278 V---YTSTTCHNTTDKVNHAVLAVGYGQEKGTPYWIVKNSWGSSWGIDGYFLIERGKNMC 334

Query: 379 GI 380
           G+
Sbjct: 335 GL 336


>gi|351629613|gb|AEQ54770.1| cysteine proteinase CP1 [Coffea canephora]
          Length = 397

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 153/351 (43%), Gaps = 69/351 (19%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEI--- 116
           FK+F+ +  + Y+  EE   R   F ++  K  E         +G ++FSD + EE    
Sbjct: 74  FKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDPSAIHGVTQFSDLTEEEFEAT 133

Query: 117 -LCKTGFKWSERTYERIVAD-REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACG 174
            +   G      T +    D  E   +++M+V     +P+++DWR+K        Q  CG
Sbjct: 134 YMGLKGGAGVGGTTQLGKDDGDESAAEVMMDVSD---LPESFDWREKGAVTEVKTQGRCG 190

Query: 175 SCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC 234
           SCWAFS  G                        +EG   I TGKL+  S+ QLV+C   C
Sbjct: 191 SCWAFSTTGA-----------------------IEGANFIATGKLLSLSEQQLVDCDHMC 227

Query: 235 S---------GCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
                     GC G     +  Y  +AG +E E  YPY    GE   C ++  KV +   
Sbjct: 228 DLKEKDDCDDGCSGGLMTTAFNYLIEAGGIEEEVTYPYTGKRGE---CKFNPEKVAVKV- 283

Query: 285 KDFLHFNGSET-MKKILYKYGPLSVLLNSDLIHDYNG---TPIRKNDETCSPYDLGHAVL 340
           ++F      E+ +   +   GPL++ LN+  +  Y G    P+      C    + H VL
Sbjct: 284 RNFAKIPEDESQIAANVVHNGPLAIGLNAVFMQTYIGGVSCPL-----ICDKKRINHGVL 338

Query: 341 LVGYGKQD-------NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIA 384
           LVGYG +          PYW+++NSWG    + G++++ RG+N CG+  + 
Sbjct: 339 LVGYGSRGFSILRLGYKPYWIIKNSWGKRWGEHGYYRLCRGHNMCGMSTMV 389


>gi|432936690|ref|XP_004082231.1| PREDICTED: cathepsin L-like [Oryzias latipes]
          Length = 334

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 149/348 (42%), Gaps = 65/348 (18%)

Query: 68  FKAFIVKRGRQYAN-DEEIKERFEYFKQ-----------DGHKKHERYGTSEFSDRSPEE 115
           F A+ +K GR Y++  EE + R  +              D   K  R G + F+D   EE
Sbjct: 26  FHAWRLKFGRTYSSPTEEAQRRQTWLNNRKLVLVHNILADQGIKSYRLGMTYFADMENEE 85

Query: 116 ILCKTGFKWSERTYERIV---------ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
                        Y+R++         A   +       + ++  +P A DWR K     
Sbjct: 86  -------------YKRLISQGCLGSFNASLPRRGSTFFRLPENKDLPAAVDWRDKGYVTD 132

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        LEGQ   KTGKLV  S+ Q
Sbjct: 133 VKDQKQCGSCWAFSATGS-----------------------LEGQTFRKTGKLVSLSEQQ 169

Query: 227 LVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKV-KLF 282
           LV+C+      GC G   + +  Y     G+++E+ YPY+  +GE   C Y    V    
Sbjct: 170 LVDCSGDYGNMGCGGGLMDDAFRYIQATGGIDTEESYPYEAEDGE---CRYKPDAVGATC 226

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           TG   +     + +++ +   GP+SV +++  I          ++  CS  +L H VL V
Sbjct: 227 TGYVDVSSGDEDALQEAVATIGPISVGIDASHISFQLYESGLYDEPQCSSSELDHGVLAV 286

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG ++   YWLV+NSWG    D+G+ K+ +  +N CGI   A Y  +
Sbjct: 287 GYGSENGQDYWLVKNSWGLTWGDQGYIKMSKNKSNQCGIATAASYPLV 334


>gi|163914459|ref|NP_001106314.1| cathepsin K precursor [Xenopus laevis]
 gi|159155477|gb|AAI54985.1| LOC100127265 protein [Xenopus laevis]
          Length = 331

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 137/290 (47%), Gaps = 42/290 (14%)

Query: 106 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 162
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
              P  +Q +CGSCWAFS  G                        LEGQ   K GKLV  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVG-----------------------ALEGQLKKKKGKLVVL 164

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVK 280
           S   LV+C K+  GC G +   + EY     G++SEK YPY    GE  +C Y+ S +  
Sbjct: 165 SPQNLVDCVKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAA 221

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
              G   +     + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL
Sbjct: 222 ACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVL 281

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 282 AVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|121531598|gb|ABM55484.1| digestive cysteine protease intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 152/341 (44%), Gaps = 60/341 (17%)

Query: 70  AFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---RY---------GTSEFSDRSPEEIL 117
           AF    G+ Y N  E K RF  F+++  K  E   RY         G + F+D + EE  
Sbjct: 25  AFKQTHGKTYKNLLEEKTRFGIFQRNLIKIKEHNARYDKGEETYLLGVTRFADLTHEEF- 83

Query: 118 CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCW 177
                   +   +  + ++ ++        +D  VPD+ DW +K       DQ  CGSCW
Sbjct: 84  --------KDILKGQIKNKPRLNATPTVFPEDLEVPDSIDWTEKGAVLEVKDQNPCGSCW 135

Query: 178 AFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC--AKQCS 235
           AFS                         G L+GQ AI     +  S+ QL++C  A    
Sbjct: 136 AFSAT-----------------------GALKGQNAILNNVKISLSEQQLLDCSAAYGNG 172

Query: 236 GC-DGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
            C +G     + +Y    G++SEK YPY     E   C YD SK  +   K + +   SE
Sbjct: 173 NCKEGGDMSAAFDYVRDYGIQSEKSYPYIRKQTE---CQYDASKT-ILKIKGYKNVTTSE 228

Query: 295 T-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN---- 349
             ++K +   GP+S+ +NSD +  Y    I  + + CS +DL H VL+VGYGK       
Sbjct: 229 EGLRKAVGTIGPISIAMNSDPLQLYYSGTI--SGKGCS-HDLDHGVLVVGYGKASQWSGE 285

Query: 350 IPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
             +W V+NSWG I  + G+F+I+R  NN CGI     Y  +
Sbjct: 286 TKFWRVKNSWGKIWGENGYFRIKRDANNLCGIADDPTYPVL 326


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 152/354 (42%), Gaps = 72/354 (20%)

Query: 60  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHE-RYGTSEFSDR 111
           +N+++LE  + ++ + GR Y N  E   RFE F+ +         + H+ + G ++F+D 
Sbjct: 33  ENKSMLERHEQWMAQHGRVYKNAAEKAHRFEIFRANVERIESFNAENHKFKLGVNQFADL 92

Query: 112 SPEEILCKTGFKWSERT------YERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTG 165
           + EE   +   K S+        YE + A                 VP   DWR K    
Sbjct: 93  TNEEFKTRNTLKPSKMASTKSFKYENVTA-----------------VPATMDWRTKGAVT 135

Query: 166 PAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS 225
           P  DQ  CGSCWAFS                            EG   + TGKL+  S+ 
Sbjct: 136 PIKDQGQCGSCWAFSAV-----------------------AATEGITKLSTGKLISLSEQ 172

Query: 226 QLVEC--AKQCSGCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDK--SKVK 280
           ++V+C       GC+G   + + EY     G+ +E +YPYK A+G    C   K  S   
Sbjct: 173 EVVDCDVTSDDQGCNGGEMDDAFEYIIKNKGITTEANYPYKAADG---TCNTKKAASHAA 229

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAV 339
             TG + +  N    + K      P++V +++ D       + +   D  C   DL H V
Sbjct: 230 SITGYEDVTVNSEAALLKAAANQ-PIAVAIDAGDFAFQMYSSGVFTGD--CGT-DLDHGV 285

Query: 340 LLVGYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 388
            LVGYG   D   YWLV+NSWG    ++G+ ++ER  +A    CGI   A Y T
Sbjct: 286 TLVGYGATSDGTKYWLVKNSWGTSWGEDGYIRMERDVDAKEGLCGIAMDASYPT 339


>gi|108735858|gb|ABG00260.1| cathepsin L1 [Fasciola hepatica]
          Length = 219

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/232 (34%), Positives = 111/232 (47%), Gaps = 31/232 (13%)

Query: 157 DWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKT 216
           DWR+        DQ  CGSCWAFS  G                        ++GQY    
Sbjct: 6   DWRESGYVTEVKDQGNCGSCWAFSTTGT-----------------------MKGQYMKNE 42

Query: 217 GKLVEFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY 274
              + FS+ QLV+C++    +GC G   E + EY  Q GLE+E  YPY    G    C Y
Sbjct: 43  RTSISFSEQQLVDCSRPWGNNGCGGGLMENAYEYLKQFGLETESSYPYSAVEG---PCRY 99

Query: 275 D-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPY 333
           D K  V   TG   +H      ++ ++   GP +V L+++L      + I  + +TCSP 
Sbjct: 100 DRKLGVAKVTGYYTVHSGDEVELQNLVGGEGPPAVALDAELDFMMYRSGIYXS-QTCSPD 158

Query: 334 DLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
            L H VL VGYG QD   YW+V+NSWG    ++G+ ++ R   N CGI  +A
Sbjct: 159 RLSHGVLAVGYGTQDGTDYWIVKNSWGTWWGEDGYIRMVRNRGNMCGIASLA 210


>gi|126021|sp|P25775.1|LMCPA_LEIME RecName: Full=Cysteine proteinase A; Flags: Precursor
 gi|9573|emb|CAA44094.1| cysteine proteinase [Leishmania mexicana]
          Length = 354

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 56/364 (15%)

Query: 44  VVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------- 95
           VV     L  +     DN      + +F  + G+ +  D E   RF  FKQ+        
Sbjct: 18  VVCYGSALIAQTPPPVDNFVASAHYGSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLN 77

Query: 96  GHKKHERYGTS-EFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPD 154
               H  Y  S +F+D +P+E         +   Y R + + ++      +V  D   P 
Sbjct: 78  TQNPHAHYDVSGKFADLTPQEF---AKLYLNPDYYARHLKNHKE------DVHVDDSAPS 128

Query: 155 ---AWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
              + DWR K    P  +Q  CGSCWAFS  G                        +EGQ
Sbjct: 129 GVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGN-----------------------IEGQ 165

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGE 268
           +A     LV  S+  LV C     GC+G   + ++ +   +H   + +E  YPY +  G 
Sbjct: 166 WAASGHSLVSLSEQMLVSCDNIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGT 225

Query: 269 KFKCAYDKSKVKL-FTGKDFLHF-NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
           +  C +D+ +V    TG  FL   +  E + + + K GP++V +++     Y G  +   
Sbjct: 226 RPPC-HDEGEVGAKITG--FLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVV--- 279

Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
              C  + L H VL+VG+ K    PYW+V+NSWG    ++G+ ++  G+N C ++     
Sbjct: 280 -SLCLAWSLNHGVLIVGFNKNAKPPYWIVKNSWGSSWGEKGYIRLAMGSNQCMLKNYPVS 338

Query: 387 ATID 390
           AT++
Sbjct: 339 ATVE 342


>gi|341888719|gb|EGT44654.1| hypothetical protein CAEBREN_19265 [Caenorhabditis brenneri]
          Length = 396

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 46/329 (13%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE--------RYGTSEFSDRSPEEI- 116
           + FK F  K GR++ + EE K RFE F+++     E        +YG + FSD++  E+ 
Sbjct: 86  QQFKDFNKKFGREHKSLEEYKMRFEVFQKNLRDIEELNLKNPSVQYGINRFSDKTESELK 145

Query: 117 --LCKTGFKWSERTYE--RIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
             L    F  S  +    + ++       ++  V++    PD  DWR         DQ  
Sbjct: 146 NLLMDKKFMDSSLSNSSLKTLSSYRNPRNIIKNVQR----PDYIDWRNVGKVMSVKDQGQ 201

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAF+                           +E QYAI+ G L   S+ +LV+C  
Sbjct: 202 CGSCWAFATVAA-----------------------VESQYAIRKGTLWSLSEQELVDCDG 238

Query: 233 QCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNG 292
              GC G F   ++E+    GLE+E DYPY     +  +C  +  K +++  + +     
Sbjct: 239 ASYGCSGGFLTSALEFILGNGLETEDDYPYTATKHD--QCWINGDKTRVWIDEGYQLTMN 296

Query: 293 SETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRKNDETCSPYDLGHAVL-LVGYGKQDN 349
            + + + +   GP+S  + +    I  +NG     ++  C    +G+ ++ ++GYG++  
Sbjct: 297 EDDIAEWVANVGPVSFAMRAPYSFIAYHNGI-YSPSEYQCKHEAMGYVMMAIIGYGQEGG 355

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
             YW+V+NSWG    ++G+ ++ RG N C
Sbjct: 356 QNYWIVKNSWGDSWGNQGYMRLARGVNTC 384


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 175/367 (47%), Gaps = 64/367 (17%)

Query: 50  TLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHK--KHERY---- 103
           T+A+       +E + E + +F V+  +QY ++ E + R + F  + HK  KH +     
Sbjct: 9   TIAVACQAVSFSELVQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQG 68

Query: 104 ------GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDG-PVPDA 155
                   +++ D    E +    GF  + +TY +    R +++  +  +E     +PD 
Sbjct: 69  LYPYKLAMNKYGDLLHHEFVGLLNGFNRT-KTYLK----RGELQDSITFIEPAHVDIPDT 123

Query: 156 WDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIK 215
            DWR++    P  DQ  CGSCW+FS                         G LEGQ+  +
Sbjct: 124 VDWRQEGAVTPVKDQGHCGSCWSFSAT-----------------------GALEGQHFRQ 160

Query: 216 TGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKC 272
           T KLV  S+  LV+C+ +   +GC+G   + +  Y  +  G+++E  YPY   + EKF+ 
Sbjct: 161 TKKLVSLSEQNLVDCSSRFGNNGCNGGLMDNAFRYIKNNGGIDTEAAYPYMGED-EKFRY 219

Query: 273 AYDKSKVKLFTGKDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHD-----YNGTPIRK 325
           +   +K +  T K F+   +G E  +K  +   GP+S+ +  D  H+      NG     
Sbjct: 220 S---AKNRGATDKGFVDIPSGDEDKLKAAVATVGPISIAI--DASHESFQLYSNGV---Y 271

Query: 326 NDETCSPYDLGHAVLLVGYG--KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
           +D TCS  +L H VL+VGYG  ++  + YWLV+NSWG     +G+ K+ R  +N CG+  
Sbjct: 272 SDPTCSSTELDHGVLVVGYGTDEKTGMDYWLVKNSWGDTWGLDGYIKMARNQDNQCGVAT 331

Query: 383 IAGYATI 389
            A Y  +
Sbjct: 332 QASYPLV 338


>gi|194882211|ref|XP_001975206.1| GG20691 [Drosophila erecta]
 gi|190658393|gb|EDV55606.1| GG20691 [Drosophila erecta]
          Length = 378

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 151/346 (43%), Gaps = 55/346 (15%)

Query: 65  LETFKAFIVKRGRQY--ANDEEIKER-FEYFKQ--DGHKKHERYGTS-------EFSDRS 112
           ++ F  F+ + G+ Y  A D  + ER F   K   D        G S        F+D +
Sbjct: 67  VQNFGDFLSQSGKTYLSAADRALHERAFASTKNVVDAGNAAFAKGVSTFKQSVNAFADLT 126

Query: 113 PEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQA 171
             E L + TG K S     R  A  ++V      +    P+PDA+DWR+     P   Q 
Sbjct: 127 HPEFLSQLTGLKRSPEAKARAAASLKEV------ILPKKPIPDAFDWREHGGVTPVKFQG 180

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CGSCWAF+  G                        +EG    KTG L   S+  LV+C 
Sbjct: 181 TCGSCWAFATTG-----------------------AIEGHTFRKTGSLPNLSEQNLVDCG 217

Query: 232 K----QCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTG 284
                  +GCDG F E +  +    Q G+     YPYK+    K  C YD  K      G
Sbjct: 218 PLEDFSLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYKD---NKETCKYDGKKSGASLKG 274

Query: 285 KDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHAVLLVG 343
              +     E +KK++   GP++  +N  + + +Y G     ND+ C+  +  H++L+VG
Sbjct: 275 FAAIPPKDEEQLKKVVATLGPVACSVNGLETLKNYAGGIY--NDDECNKGEPNHSILVVG 332

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           YG ++   YW+++NSW     ++G+F++ RG N C I +   Y  +
Sbjct: 333 YGSENGQDYWIIKNSWDDTWGEQGYFRLPRGQNYCFIAEECSYPVV 378


>gi|145351119|ref|XP_001419933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580166|gb|ABO98226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 272

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 126/277 (45%), Gaps = 52/277 (18%)

Query: 125 SERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGK 184
           SE   +R     E +E + +E      +P+ +DWR K       DQ  CGSCW FS    
Sbjct: 22  SEEREKRKARGGETLETLPVE-----HLPEEFDWRFKGAVTRVKDQGQCGSCWTFSTT-- 74

Query: 185 FSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQC---------S 235
                                G +EG + I TGKLVE S+ QLV+C   C         S
Sbjct: 75  ---------------------GAIEGAHFISTGKLVELSEQQLVDCDVGCDPDVPNACDS 113

Query: 236 GCDGCFFEPSIEY-THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSE 294
           GC+G     ++EY     G+++EK YPY    GEK +C   K K+   T K+F   +  E
Sbjct: 114 GCNGGLPSNAMEYIVEHGGIDTEKSYPYV---GEKGECKAKKGKLGA-TLKNFSFVSDDE 169

Query: 295 -TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI--- 350
             M   L KYGPLS+ +N+  +  Y G         C    L H VL+VGYG        
Sbjct: 170 KQMAAALVKYGPLSIGINAAWMQSYIGG--VACPWLCDAESLDHGVLIVGYGSSGFAPVR 227

Query: 351 ----PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQI 383
               PYW+V+NSW P   + G+++I +   +CGI  +
Sbjct: 228 WAPEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNM 264


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 122/247 (49%), Gaps = 35/247 (14%)

Query: 150 GPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
           G +P   DWR+K    P  D   CGSCWAFS  G                        L 
Sbjct: 110 GKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTGS-----------------------LG 146

Query: 210 GQYAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN 266
           GQ  +K  KLV  S+ QLV+C+      GCDG     + +Y     G+++E  YPY+   
Sbjct: 147 GQLFLKNKKLVSLSEQQLVDCSGNYGNDGCDGGIMVQAFQYIKGNGGIDTEGSYPYE--- 203

Query: 267 GEKFKCAYDKSKVKLFTGKDFLHF-NGSET-MKKILYKYGPLSVLLNS-DLIHDYNGTPI 323
            E  KC Y K+K    T K ++    G E  +K+ + + GP+SV +++ +L   +    I
Sbjct: 204 AEDDKCRY-KTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSFQFYSEGI 262

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQ 382
             ++  CS  +L H VL+VGYG ++   YWLV+NSWGP   + G+ KI R  NN CGI  
Sbjct: 263 Y-DEPFCSNTELDHGVLVVGYGTENGQDYWLVKNSWGPSWGENGYIKIARNHNNHCGIAS 321

Query: 383 IAGYATI 389
           +A Y  +
Sbjct: 322 MASYPIV 328


>gi|56553473|gb|AAV97878.1| recombinant cysteine protease [Cloning vector pQ-CPB]
          Length = 335

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 143/337 (42%), Gaps = 63/337 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R YA  +E ++R   F+++         +  H R+G ++F D S EE   +
Sbjct: 30  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 89

Query: 120 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
                T F    K++ + Y ++ AD                 P A DWR+K    P  DQ
Sbjct: 90  YLSGATHFAKAKKFASQYYRKVGADLSTA-------------PAAVDWREKGAVTPVKDQ 136

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CGSCWAFS  G                        +E ++ + T  L+  S+ +LV C
Sbjct: 137 GMCGSCWAFSAIGN-----------------------IESKWYLATHSLISLSEQELVSC 173

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
                GC+G     + ++        + +   YPY + NG   +C+     V      G 
Sbjct: 174 DDVDEGCNGGLMGQAFDWLLNNRNGAVYTGASYPYVSGNGSVPECSESSDLVIGAYIDGH 233

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +  N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY 
Sbjct: 234 VTIESN-EDTMAAWLAANGPIAIAVDASAFMSYTGGVLT----SCDGKQLNHGVLLVGYN 288

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
               +PYW+++NSWG    ++G+ ++ +G N C I++
Sbjct: 289 MTGEVPYWVIKNSWGENWGEKGYVRVRKGTNECLIQE 325


>gi|50539796|ref|NP_001002368.1| cathepsin L.1 precursor [Danio rerio]
 gi|49900360|gb|AAH75887.1| Cathepsin L.1 [Danio rerio]
          Length = 334

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 144/348 (41%), Gaps = 65/348 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKER------------FEYFKQDGHKKHERYGTSEFSDRSPEE 115
           F A+ +K G+ Y + EE   R                  D   K  R G + F+D S EE
Sbjct: 26  FHAWKLKFGKSYRSAEEESHRQLTWLTNRKLVLVHNMMADQGLKSYRLGMTYFADMSNEE 85

Query: 116 ILCKTGFKWSERTYERIV---------ADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
                        Y ++V           + +       + K   VPD  DWR K     
Sbjct: 86  -------------YRQLVFRGCLGSMNNTKARGGSTFFRLRKAAVVPDTVDWRDKGYVTD 132

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
             DQ  CGSCWAFS  G                        LEGQ   KTGKLV  S+ Q
Sbjct: 133 IKDQKQCGSCWAFSATGS-----------------------LEGQTFRKTGKLVSLSEQQ 169

Query: 227 LVECAKQCS--GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLF- 282
           LV+C+      GCDG   + + +Y     GL++E  YPY+  +GE   C ++ S V    
Sbjct: 170 LVDCSGSYGNYGCDGGLMDQAFQYIEANKGLDTEDSYPYEAQDGE---CRFNPSTVGASC 226

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           TG   +       +++ +   GP+SV +++        +    N+  CS  +L H VL V
Sbjct: 227 TGYVDIASGDESALQEAVATIGPISVAIDAGHSSFQLYSSGVYNEPDCSSSELDHGVLAV 286

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG  +   YW+V+NSWG     +G+  + R  +N CGI   A Y  +
Sbjct: 287 GYGSSNGDDYWIVKNSWGLDWGVQGYILMSRNKSNQCGIATAASYPLV 334


>gi|426345827|ref|XP_004040600.1| PREDICTED: cathepsin O [Gorilla gorilla gorilla]
          Length = 321

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 132/285 (46%), Gaps = 46/285 (16%)

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGP---VPDAWDWR 159
           YG ++FS   PEE          +  Y R  +   K  +   EV    P   +P  +DWR
Sbjct: 67  YGINQFSHLFPEEF---------KAIYLR--SKPSKFPRYSAEVHMSIPNVSLPLRFDWR 115

Query: 160 KKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKL 219
            K V     +Q  CG CWAFS+ G                        +E  YAIK   L
Sbjct: 116 DKQVVTQVRNQQMCGGCWAFSVVGA-----------------------VESAYAIKGKPL 152

Query: 220 VEFSKSQLVECAKQCSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANG--EKFKCAYD 275
            + S  Q+++C+    GC+G     ++ + +  Q  L  + +YP+K  NG    F  ++ 
Sbjct: 153 EDLSVQQVIDCSYNNYGCNGGSTLNALNWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHS 212

Query: 276 KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 335
              +K ++  DF   N  + M K L  +GPL V++++    DY G  I+ +   CS  + 
Sbjct: 213 GFSIKGYSAHDFS--NQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHH---CSSGEA 267

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
            HAVL+ G+ K  + PYW+VRNSWG     +G+  ++ G+N CGI
Sbjct: 268 NHAVLITGFDKTGSTPYWIVRNSWGSSWGVDGYAHVKMGSNVCGI 312


>gi|374414520|pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
 gi|374414521|pdb|3QJ3|B Chain B, Structure Of Digestive Procathepsin L2 Proteinase From
           Tenebrio Molitor Larval Midgut
          Length = 331

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 154/345 (44%), Gaps = 50/345 (14%)

Query: 64  ILETFKAFIVKRGRQYANDEE-------IKERFEYFKQDGHKKHE-----RYGTSEFSDR 111
           + E ++ F     R Y N +E        +++ E F++   K  +       G + F+D 
Sbjct: 18  VAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDM 77

Query: 112 SPEEILCKT-GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
           +PEE+   T G       ++  +  + + +  L    +    P ++DWR + +  P  +Q
Sbjct: 78  TPEEMKAYTHGLIMPADLHKNGIPIKTREDLGLNASVR---YPASFDWRDQGMVSPVKNQ 134

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKS--QLV 228
            +CGS WAFS  G                        +E Q  I  G   + S S  QLV
Sbjct: 135 GSCGSSWAFSSTGA-----------------------IESQMKIANGAGYDSSVSEQQLV 171

Query: 229 ECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKSKVKL-FTGKD 286
           +C     GC G +   +  Y  Q  G++SE  YPY+ A+G    C YD ++V    +G  
Sbjct: 172 DCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADG---NCHYDPNQVAARLSGYV 228

Query: 287 FLHFNGSETMKKILYKYGPLSVLLNSD-LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           +L       +  ++   GP++V  ++D     Y+G      + TC      HAVL+VGYG
Sbjct: 229 YLSGPDENMLADMVATKGPVAVAFDADDPFGSYSGGVYY--NPTCETNKFTHAVLIVGYG 286

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYATI 389
            ++   YWLV+NSWG     +G+FKI R  NN CGI  +A   T+
Sbjct: 287 NENGQDYWLVKNSWGDGWGLDGYFKIARNANNHCGIAGVASVPTL 331


>gi|213623960|gb|AAI70453.1| Hypothetical protein LOC100127265 [Xenopus laevis]
          Length = 331

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 137/290 (47%), Gaps = 42/290 (14%)

Query: 106 SEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGP--VPDAWDWRKKN 162
           ++  D + EE++   TG K         +  R K   +  E +K  P  VPD+ D+RKK 
Sbjct: 78  NQLGDMTSEEVVRTMTGLK---------IHKRNKPTNLTFEHDK-APEKVPDSIDYRKKG 127

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEF 222
              P  +Q +CGSCWAFS  G                        LEGQ   K GKLV  
Sbjct: 128 YVTPIRNQGSCGSCWAFSSVG-----------------------ALEGQLKKKKGKLVVL 164

Query: 223 SKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKS-KVK 280
           S   LV+C K+  GC G +   + EY     G++SEK YPY    GE  +C Y+ S +  
Sbjct: 165 SPQNLVDCVKKNDGCGGGYMTNAFEYVRDNKGIDSEKAYPYV---GEDQECMYNVSGRAA 221

Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
              G   +     + +KK +   GP+SV +++ L      +     D+ CS  D+ HAVL
Sbjct: 222 ACKGYKEVQEGNEKALKKAVALVGPVSVGIDAGLSSFQFYSKGVYYDKDCSAEDINHAVL 281

Query: 341 LVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            VGYG Q    YW+V+NSWG    D+G+  + +   NACGI  +A Y  +
Sbjct: 282 AVGYGTQKKAKYWIVKNSWGEEWGDKGYILMAKDKGNACGIANLASYPVM 331


>gi|394331828|gb|AFN27133.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 136/326 (41%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  DQ ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        +E Q+A+   +L   S   LV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IESQWALAGHRLTALSDHHLVSCHDKDNG 187

Query: 237 CDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
                   + E+        + +E  YPY +++G   +C+     V       ++    S
Sbjct: 188 RPAGLMLQAFEWLLRNMNGTMFTEDSYPYVSSSGYVPECSNSSQLVPGARIDGYVTIESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
           ET M   L K GP+S+ L++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 ETVMAAWLAKNGPISIALDASSFMSYQSGVV----TSCAGMPLNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|194755357|ref|XP_001959958.1| GF13132 [Drosophila ananassae]
 gi|190621256|gb|EDV36780.1| GF13132 [Drosophila ananassae]
          Length = 392

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 153/347 (44%), Gaps = 54/347 (15%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHERYGTS-------EFSD 110
           N +++F  F+ + G+ YA+  E + R   F       D        G S        FSD
Sbjct: 80  NNVQSFGDFVAQTGKTYASAAEQQLRETAFSASKSLVDAGNAAFASGASTFKLAVNAFSD 139

Query: 111 RSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
            +  E L + TG K S +   +  A ++            G VP+++DWR+     P  +
Sbjct: 140 LTHSEFLSQLTGRKRSSQGDAQAAASKQPPSV------PAGAVPESFDWRQHGAVTPVKN 193

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAF+  G                        +EG  A  TG L   S+  LV+
Sbjct: 194 QGTCGSCWAFATTG-----------------------TIEGHIARATGNLPVLSEQNLVD 230

Query: 230 CAKQ---CSGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKS-KVKLFT 283
           C  Q     GCDG +   ++ + H  Q G+ + + Y Y +   ++  C Y+ S       
Sbjct: 231 CGPQEFALVGCDGGYQGYAMAFIHENQKGVSNSESYAYLD---KQDTCKYNPSTSAAQIK 287

Query: 284 GKDFLHFNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           G   +     E +KK++   GP++  L  ++ + +Y+      +DE C+  D  H+VL+V
Sbjct: 288 GWAEIPVGDEELLKKVVGTLGPVACSLYGTETLLNYDSGIY--SDEQCNGEDPNHSVLVV 345

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           GYG ++   YW+V+NSW     ++G+F++ RG N C I     Y  +
Sbjct: 346 GYGSENGQDYWIVKNSWSAAWGEDGYFRLVRGKNFCNIAAECAYPVV 392


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 154/343 (44%), Gaps = 55/343 (16%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHK---KHERYGTS---------EFSDRSPEE 115
           + AF    G++Y +D E   R + + ++  K    +E+Y  S         EF D    E
Sbjct: 23  WSAFKALHGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLAMNEFGDMLHHE 82

Query: 116 IL-CKTGFKWSERTYERIVADREKVEKMLMEVE--KDGPVPDAWDWRKKNVTGPAGDQAA 172
            +  + GFK       R   D  +     +E E  +D  +P   DWRKK    P  +Q  
Sbjct: 83  FVSTRNGFK-------RNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPVKNQGQ 135

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCW+FS  G                        LEGQ+  K  KLV  S+  L++C++
Sbjct: 136 CGSCWSFSTTGS-----------------------LEGQHFRKLHKLVSLSEQNLIDCSR 172

Query: 233 Q--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
               +GC+G   + + +Y     G+++E+ YPY   +G    C ++KS V   T   F+ 
Sbjct: 173 SFGNNGCEGGLMDYAFKYIKANKGIDTEQSYPYNATDG---VCHFNKSAVGA-TDTGFVD 228

Query: 290 F-NGSET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQ 347
              G E  +KK +   GP+SV +++        +    ++  C    L H VL+VGYG +
Sbjct: 229 IPEGDENKLKKAVATVGPVSVAIDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTK 288

Query: 348 DNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           D   YWLV+NSWG    D G+  + R  +N CGI   A Y  +
Sbjct: 289 DGQDYWLVKNSWGTTWGDGGYIYMSRNKDNQCGIASAASYPLV 331


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 157/345 (45%), Gaps = 59/345 (17%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---YGTSEFSDRSPEE 115
           + E +  ++ K G+ Y   +E ++RF+ FK+     D H    R    G + F+D + EE
Sbjct: 31  VREIYDLWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEE 90

Query: 116 ---ILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAA 172
              +   T    + R  +   A R      L  +      P++ DWR +    P  +Q +
Sbjct: 91  YRALYLGTRSPPARRVMKAKTASRRYAVNNLDRL------PESMDWRTRGAVAPVKNQGS 144

Query: 173 CGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAK 232
           CGSCWAFS                           +EG   I TG+L+  S+ +LV C K
Sbjct: 145 CGSCWAFSTIA-----------------------AVEGINQIVTGELISLSEQELVSCDK 181

Query: 233 Q-CSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF--L 288
           +  SGC+G   + + ++     GL++E+DYPY+  +G+   C   +   K+ +   +  +
Sbjct: 182 KYNSGCNGGLMDYAFQFIIDNGGLDTEEDYPYEAFDGQ---CDPTRKNAKVVSIDAYEDV 238

Query: 289 HFNGSETMKKILYKYGPLSVLLNSD--LIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK 346
             N  E++KK +  + P+SV + +    +  Y           C    L H V+ VGYGK
Sbjct: 239 PANDEESLKKAV-AHQPVSVAIEASGLALQLYQSGVFTGK---CGSA-LDHGVVAVGYGK 293

Query: 347 QDNIPYWLVRNSWGPIGPDEGFFKIERG-----NNACGIEQIAGY 386
           ++ + YWLVRNSWG    ++G+FK+ER         CGI   A Y
Sbjct: 294 ENGVDYWLVRNSWGTSWGEDGYFKLERNVKHITEGKCGIAMQASY 338


>gi|154336052|ref|XP_001564262.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061296|emb|CAM38321.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 479

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 148/350 (42%), Gaps = 60/350 (17%)

Query: 59  FDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTS-EFS 109
            D+E     F  F  + G+ +  +     RF  FK++            H  Y  S +F+
Sbjct: 33  IDDEVASAHFMHFKKQHGKSFGEEAVEGHRFNAFKENMQTAVYLNAQNPHAHYDVSGKFA 92

Query: 110 DRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGD 169
             +P+E   +  +   +    ++ A +E+    + E  + G    A DWR+K       D
Sbjct: 93  ALTPQEFAKQ--YLNPDYYTRQLKAHKERAH--VYEGVRGGL--SAVDWREKGAVTEVKD 146

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
           Q  CGSCWAFS  G                        +EGQ+A+    LV  S+  LV 
Sbjct: 147 QGLCGSCWAFSAIGN-----------------------IEGQWALSGNTLVSLSEQMLVS 183

Query: 230 CAKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKD 286
           C     GC+G   + +  +    H   + +E  YPY + +G    C        L TGK 
Sbjct: 184 CDTVDMGCNGGLMDQAWAWIIKNHSGAVYTEVSYPYTSGDGSTASC--------LSTGKV 235

Query: 287 FLHFNGS-------ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAV 339
               +G        + ++  L K GP+S+ +++     Y G  +      C  Y+L H V
Sbjct: 236 GARISGQVSLPQDEDAIEAWLEKNGPISIAVDATTWQLYFGGVV----SNCFAYNLNHGV 291

Query: 340 LLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           LLVGY    N PYW+V+NSWG    + G+ ++ +G+N C ++  A  AT+
Sbjct: 292 LLVGYNNSANPPYWIVKNSWGTSWGEHGYIRLAKGSNQCMMKDYAMSATV 341


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 154/342 (45%), Gaps = 46/342 (13%)

Query: 64  ILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTG-- 121
           + + +  F     ++Y +  E K R + + ++ HK  +     E  ++S +  + K G  
Sbjct: 27  LADEWHLFKATHKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGEKSYQVAMNKFGDL 86

Query: 122 ----FKWSERTYERIVADREKVEKMLMEVE-KDGPVPDAWDWRKKNVTGPAGDQAACGSC 176
               F+     Y+    +  + E     +E  +  VP++ DWR+K    P  DQ  CGSC
Sbjct: 87  LHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQCGSC 146

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS- 235
           WAFS  G                        LEGQ   KTGKLV  S+  L++C+ +   
Sbjct: 147 WAFSSTG-----------------------ALEGQTFRKTGKLVSLSEQNLIDCSGKYGN 183

Query: 236 -GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANG-----EKFKCAYDKSKVKLFTGKDFL 288
            GC+G   + + +Y     G+++E  YPY+  +G      + + A D+  V + +G++  
Sbjct: 184 EGCNGGLMDQAFQYIKDNKGIDTENTYPYEAEDGVCRYNPRNRGAVDRGFVDIPSGEE-- 241

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
                + +K  +   GP+SV +++        +     + +C   DL H VL+VGYG  +
Sbjct: 242 -----DKLKAAVATVGPVSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSDN 296

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
              YWLV+NSW     DEG+ KI R   N CG+   A Y  +
Sbjct: 297 GEDYWLVKNSWSEHWGDEGYIKIARNRKNHCGVATAASYPLV 338


>gi|375340657|emb|CBJ56264.1| cathepsin S protein [Dicentrarchus labrax]
          Length = 337

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/234 (35%), Positives = 111/234 (47%), Gaps = 32/234 (13%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD  DWR+K        Q +CGSCWAFS AG                        LEGQ
Sbjct: 122 VPDTMDWREKGCVTSVKMQGSCGSCWAFSAAGA-----------------------LEGQ 158

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGE 268
            A  TGKLV+ S   LV+C+ +    GC+G F   + +Y     G++S+  YPY   NGE
Sbjct: 159 LAKTTGKLVDLSPQNLVDCSTKYGNHGCNGGFMHQAFQYVIDNQGIDSDASYPYTGRNGE 218

Query: 269 KFKCAYD-KSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
              C Y+ K +    +   FL       +K+ L   GP+SV +++             ND
Sbjct: 219 ---CRYNSKFRAANCSQYSFLPEGNEGALKEALANIGPISVAIDATRPTFTFYRSGVYND 275

Query: 328 ETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
             CS   + H VL VGYG  D   YWLV+NSWG    D+G+ ++ R  N+ CGI
Sbjct: 276 PNCSQ-KVNHGVLAVGYGTLDGQDYWLVKNSWGKTFGDQGYIRMSRNKNDQCGI 328


>gi|148908373|gb|ABR17300.1| unknown [Picea sitchensis]
          Length = 357

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 142/342 (41%), Gaps = 61/342 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F ++ G++Y +  ++  RF  F ++      R           +EF+D         
Sbjct: 58  FAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFAD--------- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               W E   + + A +            D   P   DWR++ +  P  +QA CGSCW F
Sbjct: 109 --ITWEEFHGQYLGASQNCSATKSNHKFTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTF 166

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  Y   TGK V  S+ QLV+CA   +  GC
Sbjct: 167 STTGA-----------------------LEAAYTQATGKTVILSEQQLVDCAGAFNNFGC 203

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSET 295
            G     + EY  +  GL++E+ YPY   +G    C YD + V +       +     + 
Sbjct: 204 SGGLPSQAFEYIKYNGGLDTEEAYPYTAKDG---VCNYDVNNVGVKVADSVNISLGAEDK 260

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCS--PYDLGHAVLLVGYG-KQD 348
           +K  +    P+SV     +I D+      K       TC   P D+ HAVL VGYG  ++
Sbjct: 261 LKSAVGLVRPVSVAF--QVIQDFR---FYKEGVFTSTTCGQGPMDVNHAVLAVGYGVSEE 315

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             P+W+++NSWG     EG+FK+E G N CG+   A Y  + 
Sbjct: 316 GTPHWIIKNSWGKSWGVEGYFKMEMGKNMCGVATCASYPVVS 357


>gi|394331830|gb|AFN27134.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 137/326 (42%), Gaps = 49/326 (15%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R Y    E ++R   F+++            H R+G ++F D S  E   +
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 --TGFKWSERTYERIVADREKVEKMLMEVEKD-GPVPDAWDWRKKNVTGPAGDQAACGSC 176
              G  +         A ++   +   +   D   VPDA DWRKK    P  +Q ACGSC
Sbjct: 98  YLNGAAY-------FAAAKQHAGQHYRKARADLSAVPDAVDWRKKGALTPVKNQGACGSC 150

Query: 177 WAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSG 236
           WAFS  G                        ++ Q+A+   +L   S+ QLV C  + +G
Sbjct: 151 WAFSAVGS-----------------------IQSQWALAGHRLTALSEQQLVSCHDKDNG 187

Query: 237 CDGCFFEPS---IEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           C G     +   +       + +E  YPY ++ G   +C+     V       ++    S
Sbjct: 188 CPGRLMLQAFVGVLQNMNGTMFTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTMESS 247

Query: 294 ET-MKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
            T M   L K GP+S+ +++     Y    +     +C+   L H VLLVGY +   +PY
Sbjct: 248 GTVMAACLAKNGPISIAVDASSFMSYQSGVL----TSCAGMPLNHGVLLVGYNRTGEVPY 303

Query: 353 WLVRNSWGPIGPDEGFFKIERGNNAC 378
           W+++NSWG    + G+ ++  G NAC
Sbjct: 304 WVIKNSWGENWGENGYVRVTMGVNAC 329


>gi|33333710|gb|AAQ11973.1| putative gut cathepsin L-like cysteine protease [Callosobruchus
           maculatus]
          Length = 326

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 57/337 (16%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFK------QDGHKKHER------YGTSEFSD 110
           ++ E  + F +  G+ Y +  E K RF  F+      Q+ +KK+ER         ++F+D
Sbjct: 18  SVYEEGQQFKLDHGKTYRSLVEEKRRFSVFQKNLVDIQEHNKKYERGEESFAKKVTQFAD 77

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            + EE L     +         V   +  E + ME +      DA DWR++    P  DQ
Sbjct: 78  MTHEEFLDLLKLQGVPALPSNAV-HFDNFEDIDMEEK------DAVDWREEGAVTPVKDQ 130

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
           A CGSCWAFS  G                        +EGQ+  K G LV  S  +LV+C
Sbjct: 131 ANCGSCWAFSAVG-----------------------AIEGQFFKKNGTLVSLSAQELVDC 167

Query: 231 AKQ---CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           A +    +GC G     + ++    G+++E+ YPY+   G +  C   KS   +   K +
Sbjct: 168 ATEDYGNNGCKGGLMGQAFDFVQDEGIQTEESYPYE---GRRSSCK--KSGEYVTKVKTY 222

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETC----SPYDLGHAVLLVG 343
           +     + M + +   GP++V + +  +  Y+   +   DE C       DL   VL+VG
Sbjct: 223 VFPLDEQEMARTVAAKGPVAVAIEASQLSFYDKGIV---DERCRCSNKREDLNPGVLVVG 279

Query: 344 YGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           YG ++ + YW+V+NSWG    ++G+F++++   ACGI
Sbjct: 280 YGSENGVDYWIVKNSWGADWGEKGYFRLKKDVKACGI 316


>gi|118404242|ref|NP_001072435.1| cathepsin K precursor [Xenopus (Silurana) tropicalis]
 gi|113197688|gb|AAI21683.1| hypothetical protein MGC147539 [Xenopus (Silurana) tropicalis]
          Length = 331

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 122/242 (50%), Gaps = 31/242 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +PD+ D+RKK    P  +Q +CGSCWAFS  G                        LEGQ
Sbjct: 117 IPDSIDYRKKGYVTPIRNQGSCGSCWAFSSVGA-----------------------LEGQ 153

Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKF 270
              K GKLV+ S   LV+C K+  GC G +   + EY     G++SE  YPY    GE  
Sbjct: 154 LKKKKGKLVDLSPQNLVDCVKKNDGCGGGYMTNAFEYVRDNKGIDSENAYPYV---GEDQ 210

Query: 271 KCAYDKSKVKLFTGKDFLHFN-GSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
           +C Y+ +  K  + K F     GSE  +KK +   GP+SV +++ L      +     D+
Sbjct: 211 ECMYNATG-KAASCKGFKEVQEGSEKALKKAVGLVGPVSVGIDAGLSSFQFYSKGVYYDK 269

Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER-GNNACGIEQIAGYA 387
            C+  ++ HAVL VGYG Q    YW+V+NSWG    ++G+  + R  +NACGI  +A Y 
Sbjct: 270 DCNAENINHAVLAVGYGTQKKTKYWIVKNSWGEDWGNKGYILMAREKDNACGISSLASYP 329

Query: 388 TI 389
            +
Sbjct: 330 VM 331


>gi|218137972|gb|ACK57563.1| cysteine protease-like protein [Arachis hypogaea]
          Length = 364

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 73/367 (19%)

Query: 49  DTLAIEGSLTFDNENILET---FKAFIVKRGRQYANDEEIKERFEYFKQD--GHKKHER- 102
           D + I   +   +E++L     F AF  K  + YA  EE   RF  FK +    K H+  
Sbjct: 27  DNILIRQVVEDGDEHLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFKSNLLRAKSHQEL 86

Query: 103 -----YGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWD 157
                +G ++FSD +P E      F+      + +    +     ++  +    +P  +D
Sbjct: 87  DPSAIHGVTKFSDLTPSE------FRSQFLGLKPLSLPSDAHNAPILPTDN---LPKDFD 137

Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTG 217
           WR         +Q   GSCW+FS  G                        LEG + + TG
Sbjct: 138 WRDHGAVTNVKNQGTGGSCWSFSTTG-----------------------ALEGAHFLATG 174

Query: 218 KLVEFSKSQLVECAKQC---------SGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANG 267
           +LV  S+ QLV+C  +C         SGC+G     +  YT +AG L  E+DY Y     
Sbjct: 175 ELVSLSEQQLVDCDHECDPDLNDACDSGCNGGLMTTAFGYTKKAGGLVREEDYLYTGR-- 232

Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKND 327
           ++  C +DKSK+        +     + +   L K GPLSV +N+  +  Y G       
Sbjct: 233 DRGPCKFDKSKIAASVSNFSVVSLDEDQIAANLVKNGPLSVGINAVYMQTYIGG------ 286

Query: 328 ETCSPY----DLGHAVLLVGYG-------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNN 376
               P+     L H VLLVGYG       +    PYW+++NSWG    + G++KI RG N
Sbjct: 287 -VSCPFICGKHLDHGVLLVGYGAGGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGPN 345

Query: 377 ACGIEQI 383
            CG++ +
Sbjct: 346 MCGVDSM 352


>gi|195488703|ref|XP_002092426.1| GE11675 [Drosophila yakuba]
 gi|194178527|gb|EDW92138.1| GE11675 [Drosophila yakuba]
          Length = 384

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 43/291 (14%)

Query: 108 FSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGP 166
           F+D +  E L + TG K S     R  A  ++V+        + P+PDA+DWR+     P
Sbjct: 128 FADLTHSEFLSQLTGLKRSPEAKARAAASLKEVQL------PEKPIPDAFDWREHGGVTP 181

Query: 167 AGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQ 226
              Q  CGSCWAF+  G                        +EG    KTG L   S+  
Sbjct: 182 VKFQGTCGSCWAFATTG-----------------------AIEGHTFRKTGSLPILSEQN 218

Query: 227 LVECAKQC----SGCDGCFFEPSIEYTH--QAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
           LV+C        +GCDG F E +  +    Q G+     YPY ++   K  C YD SK  
Sbjct: 219 LVDCGPVADFGLNGCDGGFQEAAFCFIDEVQKGVSQAGAYPYIDS---KDTCKYDGSKSG 275

Query: 281 L-FTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKNDETCSPYDLGHA 338
               G   +     E MKK++   GP++  +N  + + +Y G     ND+ C+  +  H+
Sbjct: 276 ASLQGFAAIPPKDEEQMKKVVATLGPIACSVNGLETLKNYAGGIY--NDDECNQGEPNHS 333

Query: 339 VLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           +L+VGYG ++   YW+V+NSW     ++G+F++ RG N C I     Y  +
Sbjct: 334 ILVVGYGSENGQDYWIVKNSWDDTWGEQGYFRLPRGQNYCFIADECSYPVV 384


>gi|116779845|gb|ABK21448.1| unknown [Picea sitchensis]
 gi|116791731|gb|ABK26088.1| unknown [Picea sitchensis]
 gi|224286276|gb|ACN40847.1| unknown [Picea sitchensis]
          Length = 357

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 142/342 (41%), Gaps = 61/342 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER--------YGTSEFSDRSPEEILCK 119
           F  F ++ G++Y +  ++  RF  F ++      R           +EF+D         
Sbjct: 58  FAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFAD--------- 108

Query: 120 TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAF 179
               W E   + + A +            D   P   DWR++ +  P  +QA CGSCW F
Sbjct: 109 --ITWEEFHGQYLGASQNCSATKSNHKFTDAQPPTKKDWREEGIVSPVKNQAHCGSCWTF 166

Query: 180 SIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GC 237
           S  G                        LE  Y   TGK V  S+ QLV+CA   +  GC
Sbjct: 167 STTGA-----------------------LEAAYTQATGKTVILSEQQLVDCAGAFNNFGC 203

Query: 238 DGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF-LHFNGSET 295
            G     + EY  +  GL++E+ YPY   +G    C YD + V +       +     + 
Sbjct: 204 SGGLPSQAFEYIKYNGGLDTEEAYPYTAKDG---VCNYDVNNVGVKVADSVNISLGAEDE 260

Query: 296 MKKILYKYGPLSVLLNSDLIHDYNGTPIRK----NDETCS--PYDLGHAVLLVGYG-KQD 348
           +K  +    P+SV     +I D+      K       TC   P D+ HAVL VGYG  ++
Sbjct: 261 LKSAVGLVRPVSVAF--QVIQDFR---FYKEGVFTSTTCGQGPMDVNHAVLAVGYGVSEE 315

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
             P+W+++NSWG     EG+FK+E G N CG+   A Y  + 
Sbjct: 316 GTPHWIIKNSWGKSWGVEGYFKMEMGKNMCGVATCASYPVVS 357


>gi|195429415|ref|XP_002062758.1| GK19626 [Drosophila willistoni]
 gi|194158843|gb|EDW73744.1| GK19626 [Drosophila willistoni]
          Length = 341

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 160/349 (45%), Gaps = 49/349 (14%)

Query: 61  NENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGH---KKHERYGTSE---------F 108
           +E + E +  F ++  + YA+  E   R + F ++ H   K ++RY T E         +
Sbjct: 22  SELVREEWNTFKLEHRKNYADSTEETFRMKIFNENKHHIAKHNQRYATGEVSYKLALNKY 81

Query: 109 SDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPA 167
           +D    E      GF ++   ++++ +  E    +     +   +P A DWR K      
Sbjct: 82  ADMLHHEFRETMNGFNYT--LHKQLRSTDESFTGVTFISPEHVKLPTAVDWRTKGAVTEV 139

Query: 168 GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQL 227
            DQ  CGSCWAFS                         G +EGQ+  K+G LV  S+  L
Sbjct: 140 KDQGHCGSCWAFSST-----------------------GAIEGQHFRKSGTLVSLSEQNL 176

Query: 228 VECAKQ--CSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTG 284
           V+C+ +   +GC+G   + +  Y     G+++EK Y Y+   G    C +DK+ +   T 
Sbjct: 177 VDCSTKYGNNGCNGGLMDNAFRYVKDNGGIDTEKSYAYE---GIDDSCHFDKNSIGA-TD 232

Query: 285 KDFLHF-NGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
           + F     G+E  + + +   GP+SV +++        +    ++  CS  +L H VL+V
Sbjct: 233 RGFADIPQGNEKKLAQAVATIGPVSVAIDASQQSFQFYSEGVYDEPNCSAENLDHGVLVV 292

Query: 343 GYG-KQDNIPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGYATI 389
           GYG ++D   YWLV+NSWG    D+GF K+ R   N CGI   + Y  +
Sbjct: 293 GYGTEKDGSDYWLVKNSWGTTWGDKGFIKMSRNKENQCGIASASSYPLV 341


>gi|291224872|ref|XP_002732426.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 691

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 111/240 (46%), Gaps = 31/240 (12%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
            PD+ DWR K       DQ ACGSCWAFS  G                        +EGQ
Sbjct: 475 APDSVDWRTKGYVTEVKDQGACGSCWAFSTTGS-----------------------MEGQ 511

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
               TGKLV FS+ QLV+C+      GC G   + +  Y    G+E E DYPY   +   
Sbjct: 512 SFKNTGKLVSFSEQQLVDCSGSYGNMGCGGGLMDQAFAYIEDYGIEPEADYPYTAKDDP- 570

Query: 270 FKCAYDKSK-VKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
             C+YD SK V   TG   +     + +++ +   GP+SV +++             ++ 
Sbjct: 571 --CSYDTSKAVATNTGYTDIATMDEKALQQAVATVGPISVAIDASHSSFRLYKSGVYDEP 628

Query: 329 TCSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERGN-NACGIEQIAGY 386
            CS   L H VL VGYG  D+   YW+V+NSWG    ++G+  + R N N CGI   A Y
Sbjct: 629 ACSQTMLDHGVLAVGYGTTDDGNDYWIVKNSWGSTWGNQGYIHMSRNNDNQCGIATNASY 688


>gi|305434756|gb|ADM53740.1| cathepsin L1 precursor [Lepeophtheirus salmonis]
          Length = 325

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 124/256 (48%), Gaps = 43/256 (16%)

Query: 146 VEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFP 205
           ++   PVP   +W K        DQ  CGSCWAFS  G                      
Sbjct: 101 LDNSAPVPSYVNWTKNGAVTAVKDQKDCGSCWAFSTTGS--------------------- 139

Query: 206 GMLEGQYAIKTGKLVEFSKSQLVECAK--QCSGCDGCFFEPSIEY-THQAGLESEKDYPY 262
             +EGQY IK  KL+ FS+ QLV+C+   +  GC+G + + + +Y     G+ +E  YPY
Sbjct: 140 --VEGQYFIKNKKLLSFSEQQLVDCSSDFRNEGCNGGWMDNAFKYLIANKGIATEDTYPY 197

Query: 263 KNANGEKFKCAYDKSKV--KLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNS---DLIH 316
              +G    C Y+K+    ++ + KD  H  GSE  +K  + + GP+SV +++   D   
Sbjct: 198 TATDG---VCVYNKTMAAGRISSFKDVKH--GSEDQLKLAVAQIGPISVAIDASSGDFQF 252

Query: 317 DYNGTPIRKNDETCSPYDLGHAVLLVGYG--KQDNIPYWLVRNSWGPIGPDEGFFKIERG 374
              G  +   DE CS   L H VL VGYG  K   + YWLV+NSW     D+G+ K+ R 
Sbjct: 253 YKKGVYV---DEECSSKYLDHGVLAVGYGTDKGTGLDYWLVKNSWSASWGDQGYIKMARN 309

Query: 375 N-NACGIEQIAGYATI 389
           + N CGI  +A Y  I
Sbjct: 310 HKNMCGIASLASYPVI 325


>gi|198435380|ref|XP_002128293.1| PREDICTED: similar to cathepsin H [Ciona intestinalis]
          Length = 438

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 151/343 (44%), Gaps = 61/343 (17%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE---------RYGTSEFSDRSPEEILC 118
           FK + ++ G+QY N EE ++RF+ F +      E           G +EFSDR+ EE   
Sbjct: 135 FKGWQIEHGKQYINQEEAEKRFQIFSKSLKTIKEFNNRVDRTWEMGLNEFSDRTFEEFA- 193

Query: 119 KTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWA 178
                 S R          K   + +  E   P        K N      +Q +CGSCW 
Sbjct: 194 ------SIRLMMPQNCSATKGNHVSLGFE---PPAQINCLEKGNFVTAVKNQGSCGSCWT 244

Query: 179 FSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAI-KTGK-LVEFSKSQLVECAKQCS- 235
           FS  G                        LE   AI K G  LV  S+ QLV+CA+  + 
Sbjct: 245 FSTTG-----------------------CLESATAIHKEGNPLVSLSEQQLVDCAQAFND 281

Query: 236 -GCDGCFFEPSIEYTH-QAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
            GC+G     + EY H   GL +E DYPY+  +G   KC +  SK   F  +      G+
Sbjct: 282 HGCNGGLPSQAFEYIHYNKGLMTEADYPYQGVDG---KCHFVASKASAFVKQIVNITKGN 338

Query: 294 ET-MKKILYKYGPLSVLLN--SDLIHDYNG---TPIRKNDETCSPYDLGHAVLLVGYGKQ 347
           E  +K+ +    P+S+  +   D  H  +G   + +  N  +    ++ HAVL VGYG  
Sbjct: 339 EDGIKEAVGLLNPVSIAFDVAKDFRHYKSGVYSSTLCGNKAS----EVNHAVLAVGYGYT 394

Query: 348 DN-IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            N   YWLV+NSWGP     G+FKIERG+N CG+   A Y  I
Sbjct: 395 SNGQDYWLVKNSWGPQWGINGYFKIERGSNMCGLADCASYPVI 437


>gi|312095086|ref|XP_003148243.1| hypothetical protein LOAG_12683 [Loa loa]
          Length = 195

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 27/220 (12%)

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            ACGSCWAFS+ G                        +EG +AIK GKL+  S+ +L++C
Sbjct: 1   VACGSCWAFSVTGN-----------------------IEGAWAIKKGKLISLSEQELIDC 37

Query: 231 AKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLH 289
                GC G        E     GLESEKDYPY   +G   KC   + ++ ++       
Sbjct: 38  DVIDQGCKGGLPLNAYKEIIRMGGLESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQL 94

Query: 290 FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
            +    +   + K GP+S+ +N+  +  Y           C P  + H VL+VGYG++ N
Sbjct: 95  PDDEIKIAAWVAKKGPVSIGVNAGPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEAN 154

Query: 350 IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
            PYW+++NSWG    + G++++ RG N CG++++A  A +
Sbjct: 155 KPYWIIKNSWGTKWGENGYYRLYRGKNVCGVKEMATTAIV 194


>gi|224116884|ref|XP_002317418.1| predicted protein [Populus trichocarpa]
 gi|222860483|gb|EEE98030.1| predicted protein [Populus trichocarpa]
          Length = 503

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 156/347 (44%), Gaps = 53/347 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKH---ERYGTSEFSD 110
           E+I+E F+ +  +  + Y +  E ++R+  FK++        G K        G ++F+D
Sbjct: 44  ESIIEIFQQWRDRHQKVYEHAAESEKRYRNFKRNLKYIIEKAGKKTAALGHSVGLNKFAD 103

Query: 111 RSPEEILCKTGFK--WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAG 168
            S EE      FK  +  +  + I   R           +    P + DWRKK V     
Sbjct: 104 LSNEE------FKELYLSKVKKPINIKRSTARDWRQRNLQTCDAPSSLDWRKKGVVTAVK 157

Query: 169 DQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLV 228
           DQ  CGSCW+FS  G                        +EG  AI TG L+  S+ +LV
Sbjct: 158 DQGDCGSCWSFSTTG-----------------------AIEGINAIVTGDLISLSEQELV 194

Query: 229 ECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDF 287
           +C     GC+G + + + E+  +  G+++E +YPY   +G    C   K ++K+ +   +
Sbjct: 195 DCDTTNYGCEGGYMDYAFEWVINNGGIDTEANYPYTGVDG---TCNTTKEEIKVVSIDGY 251

Query: 288 LHFNGSETMKKILYKYGPLSVLLNSDLI--HDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
              + +++         P+SV ++   +    Y G  I   D +  P D+ HAVL+VGYG
Sbjct: 252 TDVDETDSALLCATVQQPISVGMDGSALDFQLYTGG-IYDGDCSDDPNDIDHAVLIVGYG 310

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNN----ACGIEQIAGYAT 388
            ++   YW+V+NSWG     EG+F I+R  +     C I   A Y T
Sbjct: 311 SENGEDYWIVKNSWGTEWGMEGYFYIKRNTDLPYGVCAINAEASYPT 357


>gi|1581746|prf||2117247B Cys protease:ISOTYPE=2
          Length = 467

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 134/339 (39%), Gaps = 43/339 (12%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSP 113
           E +   F AF  + G+ Y +  E   R   FK++            H  +G + FSD + 
Sbjct: 32  ETLASQFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANPHASFGVTPFSDLTR 91

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
           EE   +              A +++V   +    + G  P A DWR +       DQ  C
Sbjct: 92  EEFRSRY-----HNAAAHFAAAQKRVRVPVEVEVEVGGAPAAVDWRARGAVTAIKDQGGC 146

Query: 174 GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
           GSCWAFS  G                        +EGQ+ +    L   S+  LV C   
Sbjct: 147 GSCWAFSTIGN-----------------------IEGQWHLAGNPLTGLSEQMLVSCDNA 183

Query: 234 CSGCDGCFFEPSIEYT---HQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF 290
            +GCDG   + + ++    +   + +E  Y Y +  G+   C      V           
Sbjct: 184 DNGCDGGLMDSAFDWIVGQNNGSVYTEASYSYVSGGGDSQTCNMSSHVVGAVISGHVDLP 243

Query: 291 NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNI 350
              + M   L   GPL++ +++     Y G  +      C    L H V+LVGY    N 
Sbjct: 244 QDEDKMAAWLAVNGPLAIAVDATSFMSYTGGVLTN----CVSDQLDHGVVLVGYNDSSNP 299

Query: 351 PYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           PYW+++NSWG    +EG+ +I++G N C ++  A  A +
Sbjct: 300 PYWIIKNSWGADWGEEGYIRIQKGTNQCLVKNYACSAVV 338


>gi|393904668|gb|EFO15826.2| hypothetical protein LOAG_12683 [Loa loa]
          Length = 202

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 27/221 (12%)

Query: 170 QAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVE 229
             ACGSCWAFS+ G                        +EG +AIK GKL+  S+ +L++
Sbjct: 7   SVACGSCWAFSVTGN-----------------------IEGAWAIKKGKLISLSEQELID 43

Query: 230 CAKQCSGCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
           C     GC G        E     GLESEKDYPY   +G   KC   + ++ ++      
Sbjct: 44  CDVIDQGCKGGLPLNAYKEIIRMGGLESEKDYPY---DGHGEKCHLVRKEIAVYINDSIQ 100

Query: 289 HFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQD 348
             +    +   + K GP+S+ +N+  +  Y           C P  + H VL+VGYG++ 
Sbjct: 101 LPDDEIKIAAWVAKKGPVSIGVNAGPLQFYRHGISHPWKAFCLPSHINHGVLIVGYGQEA 160

Query: 349 NIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           N PYW+++NSWG    + G++++ RG N CG++++A  A +
Sbjct: 161 NKPYWIIKNSWGTKWGENGYYRLYRGKNVCGVKEMATTAIV 201


>gi|351701945|gb|EHB04864.1| Cathepsin W [Heterocephalus glaber]
          Length = 373

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 158/355 (44%), Gaps = 65/355 (18%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFKQD---GHKKHER------YGTSEFSDRSPEEI 116
           E FK F ++  + Y+N  E   R + F  +     +  E       +G + FSD + EE 
Sbjct: 40  EVFKLFQIQFNKSYSNPAEHARRLDIFVHNLAMAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKK-NVTGPAGDQAACGS 175
               G  W     +  V  + + EK  +       +P + DWRK  N+  P   Q  C  
Sbjct: 100 GQLYG-NWRAAKKDLRVGRKVRFEKQEL-------IPPSCDWRKAPNIISPVKYQGKCNC 151

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I+  + VE S  +L++C +   
Sbjct: 152 CWAIAAAGN-----------------------IEALWNIRFKQSVEVSVQELLDCGRCGD 188

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYK-NANGEKFKCAYDKSKVKLFTGKDFLHFNGS 293
           GC G + ++  I   + +GL SEKDY ++  AN  +    + K   K+   +D++    +
Sbjct: 189 GCLGGYVWDAFITVLNYSGLASEKDYRFRGRANIHRCLAPFYK---KVAWIQDYVMLPRN 245

Query: 294 E-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG------- 345
           E TM + +   GP++VL+N  L+  Y    IR    TC P+ + H VLLVG+G       
Sbjct: 246 EHTMARYVATQGPITVLINQMLLQHYRQGIIRATPSTCDPWLVNHYVLLVGFGKEEEKKG 305

Query: 346 -----------KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                       + + PYW+++NSWG    ++G+F++ +G+N CGI +    A I
Sbjct: 306 SEKDLSQSNHLPRHSTPYWILKNSWGAHWGEQGYFRLHQGSNTCGITRSPLTACI 360


>gi|350535639|ref|NP_001233949.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
 gi|108937128|gb|ABG23376.1| phytophthora-inhibited protease 1 [Solanum lycopersicum]
          Length = 345

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 161/347 (46%), Gaps = 59/347 (17%)

Query: 63  NILETFKAFIVKRGRQYANDEEIKERFEYFKQD-------GHKKHERY--GTSEFSDRSP 113
           ++LE  + ++V  GR Y +D E + RF+ FK++            +RY    ++++D + 
Sbjct: 36  SMLERHENWMVHHGRVYKDDIEKEHRFKTFKENVEFIESFNKNGTQRYKLAVNKYADLTT 95

Query: 114 EEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG--PVPDAWDWRKKNVTGPAGDQA 171
           EE      F  S    +  +  +++        + D    VP++ DWRK+       DQ 
Sbjct: 96  EE------FTTSFMGLDTSLLSQQESTATTTSFKYDSVTEVPNSMDWRKRGSVTGVKDQG 149

Query: 172 ACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECA 231
            CG CWAFS A                         +EG Y I   +L+  S+ QL++C+
Sbjct: 150 VCGCCWAFSAAAA-----------------------IEGAYQIANNELISLSEQQLLDCS 186

Query: 232 KQCSGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFL 288
            Q  GC+G     + ++  Q    G+ +E +YPY+ A      C  ++       G + +
Sbjct: 187 TQNKGCEGGLMTVAYDFLLQNNGGGITTETNYPYEEAQN---VCKTEQPAAVTINGYEVV 243

Query: 289 HFNGSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG-- 345
             + S  +K ++ +  P+SV +  +D  H Y G+ I   D +C+   L HAV ++GYG  
Sbjct: 244 PSDESSLLKAVVNQ--PISVGIAANDEFHMY-GSGIY--DGSCNS-RLNHAVTVIGYGTS 297

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIER----GNNACGIEQIAGYAT 388
           ++D   YW+V+NSWG    +EG+ +I R        CGI ++A + T
Sbjct: 298 EEDGTKYWIVKNSWGSDWGEEGYMRIARDVGVDGGHCGIAKVASFPT 344


>gi|384941728|gb|AFI34469.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 119/249 (47%), Gaps = 39/249 (15%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           +P + DWRKK    P  +Q  CGSCWAFS                         G LEGQ
Sbjct: 114 LPKSVDWRKKGYVTPVKNQKQCGSCWAFSAT-----------------------GALEGQ 150

Query: 212 YAIKTGKLVEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGE 268
              KTGKLV  S+  LV+C++     GC+G F   +  Y  +  GL+SE+ YPY   +G 
Sbjct: 151 MFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMNSAFRYVKENGGLDSEESYPYVAMDG- 209

Query: 269 KFKCAY-DKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS--DLIHDYNGTPIRK 325
              C Y  ++ V   TG + +     + + K +   GP+SV +++       Y      +
Sbjct: 210 --ICKYRSENSVANDTGFEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFE 267

Query: 326 NDETCSPYDLGHAVLLVGYG----KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGI 380
            D  CS  +L H VL+VGYG      DN  YWLV+NSWGP     G+ KI +  +N CGI
Sbjct: 268 PD--CSSKNLDHGVLVVGYGFEGANSDNNKYWLVKNSWGPEWGSNGYVKIAKDKDNHCGI 325

Query: 381 EQIAGYATI 389
              A Y T+
Sbjct: 326 ATAASYPTV 334


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 162/355 (45%), Gaps = 61/355 (17%)

Query: 52  AIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----DGHKKHER---- 102
           A+E     + +N+ E + A   K G+ Y++D E   R   F       + H         
Sbjct: 24  ALEDGRALEIKNMFEDWAA---KHGKSYSSDWEKARRLMIFSDTLAYIEKHNAQPNTTFT 80

Query: 103 YGTSEFSDRSPEEILCKTGFKWSERTYE-RIVADREKVEKMLMEVEKDGPVPDAWDWRKK 161
            G ++FSD +  E       K+    Y+ R+ A+ E V+           +P + DWR+K
Sbjct: 81  LGLNKFSDLTNAEFRAMHVGKFKRPRYQDRLPAEDEDVDV--------SSLPTSLDWRQK 132

Query: 162 NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVE 221
               P  DQ  CGSCWAFS                           +E  + + T +LV 
Sbjct: 133 GAVTPIKDQGDCGSCWAFSAIAS-----------------------IESAHFLATKELVS 169

Query: 222 FSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKSKVK 280
            S+ QL++C    +GCDG   E + ++     G+ +E  YPY  + G    C  +K+K K
Sbjct: 170 LSEQQLMDCDTVDAGCDGGLMETAFKFVVKNGGVTTEAAYPYTGSVGS---CNANKAKNK 226

Query: 281 L--FTGKDFLHFNGSETMKKILYKYGPLSVLL--NSDLIHDY-NGTPIRKNDETCSPYDL 335
           +   TG   +  + ++ + K + K  P++V +  + +   +Y +G    K D++     L
Sbjct: 227 VAEITGFKVVTEDSADALMKAVSKT-PVTVSICGSDENFQNYKSGILSGKCDDS-----L 280

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYAT 388
            H VLL+GYG +  +PYW+++NSWG    ++GF KIER  G+  CG+   + Y T
Sbjct: 281 DHGVLLIGYGTEGGMPYWIIKNSWGTSWGEDGFMKIERKDGDGMCGMNGDSSYPT 335


>gi|161598418|gb|ABX74953.1| cysteine protease [Leishmania panamensis]
          Length = 441

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 141/337 (41%), Gaps = 63/337 (18%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQD--------GHKKHERYGTSEFSDRSPEEILCK 119
           F+ F     R YA   E ++R   F+++         +  H R+G ++F D S  E   +
Sbjct: 38  FEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNPHARFGITKFFDLSEAEFATR 97

Query: 120 -----TGF----KWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
                T F    K++ + Y ++ AD                 P A DWR+     P  DQ
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTA-------------PAAVDWRQMGAVTPVNDQ 144

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
            ACGSCWAFS  G                        +E Q+ + T  L+  S+ +LV C
Sbjct: 145 GACGSCWAFSAIGN-----------------------IESQWYVTTHSLITLSEQELVSC 181

Query: 231 AKQCSGCDGCFFEPSIEY---THQAGLESEKDYPYKNANGEKFKCAYDKSKV--KLFTGK 285
                GC+G     + ++        + +   YPY + NG   +C+     V      G 
Sbjct: 182 DDVDEGCNGGLMLQAFDWLLNNKNGAVYTGASYPYVSGNGSVPECSESSELVVGAYIDGH 241

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
             +  N  +TM   L   GP+++ +++     Y G  +     +C    L H VLLVGY 
Sbjct: 242 VTIESN-EDTMAAWLAVNGPIAIAVDASAFMSYTGGILT----SCDGRQLNHGVLLVGYN 296

Query: 346 KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQ 382
               +PYWL++NSWG    ++G+ ++ +G N C I++
Sbjct: 297 MTGEVPYWLIKNSWGENWGEKGYVRVRKGTNECLIQE 333


>gi|350415610|ref|XP_003490694.1| PREDICTED: cathepsin O-like [Bombus impatiens]
          Length = 355

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 158/344 (45%), Gaps = 59/344 (17%)

Query: 65  LETFKAFIVKRGRQYAND-EEIKERFEYF--------KQDGHKKHER---YGTSEFSDRS 112
           L+ F+ ++++  + Y ND  E +ERF+ F        K +G +  +    YG +EFSD S
Sbjct: 33  LKLFQNYVMRYNKSYRNDPTEYEERFKRFLKSLRHIEKMNGLRPSQESAYYGLTEFSDMS 92

Query: 113 PEEILCKT--------GFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
            +E L  T        G K    +Y R    R  + +    V+K   +P  +DWR K V 
Sbjct: 93  EDEFLSLTLLPDLPARGEKHVNESYHR----RHHLLQSTNRVKKSVSIPLRFDWRDKGVI 148

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q +CG+CWAFS                          ++E  YAIK G L   S 
Sbjct: 149 TPVRNQGSCGACWAFSTVE-----------------------VVESMYAIKNGTLHMLSV 185

Query: 225 SQLVECAKQ----CSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGE-KFKCAYDKS-- 277
            ++++CAK     C G D C    S     +  +  E  YP        K     DK+  
Sbjct: 186 QEMIDCAKNSNFGCEGGDICSL-LSWLLASKVQIFQESTYPLVGKTSMCKLGKMIDKASG 244

Query: 278 -KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLG 336
            K++ F   +F+  +  + +   +  +GP++  +N+    +Y G  I+ + ++ S  +L 
Sbjct: 245 VKIRDFNCDNFV--DAEDELLITVATHGPVAAAVNALSWQNYLGGVIQYHCDS-SFDNLN 301

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGI 380
           HAV +VGY K   IP+++++NSWG    D+G+  I  GNN CGI
Sbjct: 302 HAVQIVGYDKSAAIPHYIIKNSWGTNFGDKGYMYIGIGNNLCGI 345


>gi|261289785|ref|XP_002611754.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
 gi|229297126|gb|EEN67764.1| hypothetical protein BRAFLDRAFT_284341 [Branchiostoma floridae]
          Length = 327

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 144/334 (43%), Gaps = 38/334 (11%)

Query: 68  FKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCKTGFKWSER 127
           ++AF +  G+QY + +E   R   F+ +     E    +    RS    + + G      
Sbjct: 20  WEAFKLTHGKQYKSPDEENVRRAIFRDNNQMIKEHNQEAAMGRRSYFMGMNQFGDLAHSE 79

Query: 128 TYERIVA------DREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSI 181
             E +V       +     + + E      V D  DWR+K    P  DQ  CGSCWAFS 
Sbjct: 80  YLELVVGPGLLPLNLSTPSENVFESTPGLQVDDTVDWRQKGAVTPIKDQGHCGSCWAFST 139

Query: 182 AGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS--GCDG 239
            G                        LEGQ+ +KTGKLV  S+  L++C+++    GC+G
Sbjct: 140 TGS-----------------------LEGQHFMKTGKLVSLSEQNLLDCSRRFGNKGCEG 176

Query: 240 CFFEPSIEYT-HQAGLESEKDYPYKNANGEKFKCAYDKS--KVKLFTGKDFLHFNGSETM 296
              + +  Y     G+++E+ YPY  A  EK  C Y  S     L +  D    +    M
Sbjct: 177 GLMDQAFRYIKSNGGIDTEECYPYM-AKDEKV-CDYKTSCSGATLSSYTDIKAMDEMALM 234

Query: 297 KKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVR 356
           + +    GP+SV +++             ++  CS   L H VL VGYG  D + YWLV+
Sbjct: 235 QAV-GTVGPVSVAIDASHKSLRFYKSGIYDEPECSRTKLDHGVLAVGYGSMDGMDYWLVK 293

Query: 357 NSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           NSWG    D G+ K+ R  NN CGI   A Y  +
Sbjct: 294 NSWGSAWGDMGYVKMTRNKNNQCGIATKASYPVV 327


>gi|401430127|ref|XP_003886478.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491231|emb|CBZ41048.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 375

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 124/284 (43%), Gaps = 37/284 (13%)

Query: 100 HERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR 159
           H ++G ++F D S  E   +    +         A R   +           VPDA DWR
Sbjct: 10  HAQFGITKFFDLSEAEFAAR----YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWR 65

Query: 160 KKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKL 219
           +K    P  DQ ACGSCWAFS  G                        +EGQ+ +   +L
Sbjct: 66  EKGAVTPVKDQGACGSCWAFSAVGN-----------------------IEGQWYLAGHEL 102

Query: 220 VEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQ---AGLESEKDYPYKNANGEKFKCAYDK 276
           V  S+ QLV C     GCDG     + ++  Q     L +E  YPY + NG   +C+ + 
Sbjct: 103 VSLSEQQLVSCDDMNDGCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECS-NS 161

Query: 277 SKVKLFTGKDFLHFNGS--ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYD 334
           S++ +    D     GS  + M   L K GP+++ L++     Y    +      C    
Sbjct: 162 SELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLT----ACIGKQ 217

Query: 335 LGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
           L H VLLVGY     +PYW+++NSWG    ++G+ ++  G NAC
Sbjct: 218 LNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 261


>gi|357439999|ref|XP_003590277.1| Cysteine protease [Medicago truncatula]
 gi|355479325|gb|AES60528.1| Cysteine protease [Medicago truncatula]
          Length = 514

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 159/369 (43%), Gaps = 56/369 (15%)

Query: 62  ENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHER-----------YGTSEFSD 110
           E ++E F+ +  +  + Y + EE   R E FK++     ER            G + F+D
Sbjct: 46  EQVVELFQQWKKEHQKFYIHPEEAALRLENFKRNLKYIVERNAMRNSPVGHHLGLNRFAD 105

Query: 111 RSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQ 170
            S EE   K   K  +   +R          + ++VE     P + DWRKK V     DQ
Sbjct: 106 MSNEEFKNKFISKVKKPISKR-------ASNLHVKVESCDDAPYSLDWRKKGVVTGVKDQ 158

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHI----------DQFCLL--------------IFPG 206
             CG    F     F ++L+ Y+  +           QFC+L                 G
Sbjct: 159 GNCGKLLYFM---HFKSFLVIYILELTTNFPLYSFESQFCILEKKKLDFVGSCWSFSSTG 215

Query: 207 MLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYT-HQAGLESEKDYPYKNA 265
            +EG  AI TG L+  S+ +LV+C     GC+G + + + E+  +  G+++E DYPY   
Sbjct: 216 AIEGVNAIVTGDLISLSEQELVDCDTTNDGCEGGYMDYAFEWVINNGGIDTEADYPYIGV 275

Query: 266 NGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLI--HDYNGTPI 323
            G    C   K + K+ T   +     S++         P+SV ++   +    Y G  I
Sbjct: 276 GG---TCNVTKEETKVVTIDGYTDVTQSDSALFCATVKQPISVGIDGSTLDFQLYTG-GI 331

Query: 324 RKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNN----ACG 379
              D + +P D+ HAVL+VGYG   N  YW+V+NSWG     EGF  I R  N     C 
Sbjct: 332 YDGDCSSNPDDIDHAVLIVGYGSDGNQDYWIVKNSWGTSWGIEGFIYIRRNTNLKYGVCA 391

Query: 380 IEQIAGYAT 388
           I  +A + T
Sbjct: 392 INYMASFPT 400


>gi|391341656|ref|XP_003745143.1| PREDICTED: uncharacterized protein LOC100900885 [Metaseiulus
            occidentalis]
          Length = 1356

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 147/340 (43%), Gaps = 41/340 (12%)

Query: 60   DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK 119
            D+ ++ E F  F  + G+ Y +  E +ER   F  +      R+  S         +   
Sbjct: 1048 DDSHVDEHFSNFKNEHGKSYEHPTEERERRHNFHHN-----MRFVNSMNRRNLSFALKLN 1102

Query: 120  TGFKWSERTYERIVAD------REKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAAC 173
                W++  ++ +         +   E    E  +   VPD  DWR +    P  DQA C
Sbjct: 1103 NRADWNQGEFKLLRGRLQSTNVKSSAEDFPKEKFEHRTVPDYVDWRLEGAVTPVKDQAIC 1162

Query: 174  GSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQ 233
            GSCW+F   G                        +EGQY +K G+LV F++ QLV+C+  
Sbjct: 1163 GSCWSFGTVGH-----------------------IEGQYFLKHGELVRFAEQQLVDCSWT 1199

Query: 234  CS--GCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKSKVKLFTG-KDFLH 289
                 CDG     + +Y  + GL S+  Y PY+  +G   KC   + + K  T  + + +
Sbjct: 1200 SGNDACDGGLDYVAYDYIKKYGLSSDAQYGPYRGIDG---KCKDVEIENKPITTIQRYYN 1256

Query: 290  FNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDN 349
             +G E ++K +   GP+SV +++              D  CS  +L HAVL VGYG    
Sbjct: 1257 ISGVENLRKAIAFVGPISVAIDASRPSLSFYAHGVYEDPDCSSTELDHAVLAVGYGVLHG 1316

Query: 350  IPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
             PYWL++NSW     ++G+  I + +N CG+     Y  +
Sbjct: 1317 KPYWLIKNSWSTYWGNDGYILISQKDNMCGVASTPTYVEL 1356



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 158/353 (44%), Gaps = 50/353 (14%)

Query: 53  IEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQD------GHKKHERYGT- 105
           I+  +  +  ++ E F  F    G+ Y    E ++R   F+ +       ++++  Y   
Sbjct: 259 IQEFVRHNASHVDEYFAKFKKHHGKDYRFAAEERQRRHNFRHNVRYVNSMNRRNLSYALK 318

Query: 106 -SEFSDRSPEEILCKTG--FKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKN 162
            +E +D + EE+    G   + S R + R  +  E           D  +PD  DWR + 
Sbjct: 319 LNERADSAREELGTHGGCLRRASRRFFGRDFSPEE--------CRNDQILPDHVDWRLEG 370

Query: 163 VTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGK--LV 220
              P  +Q  CGSCW+F++                          LE QY +  GK  L 
Sbjct: 371 AVTPVKNQGTCGSCWSFAVIAH-----------------------LESQYFLNNGKENLT 407

Query: 221 EFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDY-PYKNANGEKFKCAYDKS 277
            FS+ QLV+C+   S  GC G   E +  Y  + GL +++ Y PY+   G K +     +
Sbjct: 408 RFSEQQLVDCSWDFSNTGCSGGSIESAFSYVKEYGLFTDEQYGPYREEEG-KCRDTVTGT 466

Query: 278 KVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCSPYDLG 336
           +  + T + F    G E ++  +   GP++V ++ S     Y    + KN   C   DL 
Sbjct: 467 EPTISTLEGFNAIGGKECLRNYIALKGPIAVAIDASSPSFVYYSHGVYKN-PACG-RDLN 524

Query: 337 HAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
           HAVL +GYG+ +  PYWL++NSWG I   EGF  I + NN CGIE    YA +
Sbjct: 525 HAVLAIGYGELNGEPYWLIKNSWGDIWGSEGFMLISQENNTCGIEDELSYADL 577


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 154/355 (43%), Gaps = 52/355 (14%)

Query: 51  LAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERF---------EYFKQDGHKKHE 101
           +A   SL+F+++     ++AF +K  + Y+  EE   R          E   Q+      
Sbjct: 12  MATAASLSFESQ-----WEAFKIKHDKVYSEKEEYARRLIFQDNLKTIESHNQEADTGKH 66

Query: 102 RY--GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWR 159
            Y  G ++F+D +  E L +        +       R     M      +  V D  DWR
Sbjct: 67  SYWLGVNQFADMTHAEYLNQVIGGCLITSNLTKTGSRATYRYM-----PNMQVNDTVDWR 121

Query: 160 KKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKL 219
            K +     DQ  CGSCWAFS  G                        LEGQ+A  TG L
Sbjct: 122 DKGLVTDIKDQGQCGSCWAFSTTGS-----------------------LEGQHAKATGTL 158

Query: 220 VEFSKSQLVECAKQ--CSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDK 276
           V  S+  LV+C++Q    GC+G   +   +Y  Q  G+++E+ YPYK  N    +C +D 
Sbjct: 159 VSLSEQNLVDCSRQEGNKGCEGGDMDQGFQYIIQNKGIDTEQCYPYKAKN---HRCKFDN 215

Query: 277 SKVKLFTGKDFLHFNGSE-TMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDL 335
           S +           +G E  +K+     GP+SV +++        +    N+  CS   L
Sbjct: 216 SCIGATMSSFTDVTSGDEDALKQACANIGPISVGIDASHQSFQFYSSGVYNEFECSSTKL 275

Query: 336 GHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
            H VL+VGYG   +  YWLV+NSWG +  +EG+  + R  +N CG+   A +  +
Sbjct: 276 DHGVLVVGYGTYGSKDYWLVKNSWGTVWGNEGYIMMSRNKDNQCGVATDASFPVV 330


>gi|355687683|gb|EHH26267.1| hypothetical protein EGK_16186 [Macaca mulatta]
 gi|384945482|gb|AFI36346.1| cathepsin O preproprotein [Macaca mulatta]
          Length = 321

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 143/318 (44%), Gaps = 50/318 (15%)

Query: 74  KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 129
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 130 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G   
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGA-- 140

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 246
                                +E  YAIK   L + S  Q+++C+    GC+G     ++
Sbjct: 141 ---------------------VESAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTLNAL 179

Query: 247 EYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 302
            + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N  + M K L  
Sbjct: 180 NWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLT 237

Query: 303 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 362
           +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + PYW+VRNSWG  
Sbjct: 238 FGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSS 294

Query: 363 GPDEGFFKIERGNNACGI 380
              +G+  ++ G+N CGI
Sbjct: 295 WGVDGYAHVKMGSNVCGI 312


>gi|395735444|ref|XP_002815290.2| PREDICTED: cathepsin O [Pongo abelii]
          Length = 318

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 140/316 (44%), Gaps = 48/316 (15%)

Query: 74  KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 131
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 132 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNY 188
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G     
Sbjct: 84  --SKPSKFPRYSAEVRMSIPNVSLPLRFDWRDKHVVTQVRNQQMCGGCWAFSVVGA---- 137

Query: 189 LLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 248
                              +E  YAIK   L + S  Q+++C+    GC+G     ++ +
Sbjct: 138 -------------------VESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNW 178

Query: 249 TH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 304
            +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N  + M K L  +G
Sbjct: 179 LNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFG 236

Query: 305 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 364
           PL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + PYW+VRNSWG    
Sbjct: 237 PLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWG 293

Query: 365 DEGFFKIERGNNACGI 380
            +G+  ++ G+N CGI
Sbjct: 294 VDGYAHVKMGSNVCGI 309


>gi|426369199|ref|XP_004051582.1| PREDICTED: cathepsin W [Gorilla gorilla gorilla]
          Length = 376

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 148/356 (41%), Gaps = 64/356 (17%)

Query: 66  ETFKAFIVKRGRQYANDEEIKERFEYFK----QDGHKKHERYGTSEF-----SDRSPEEI 116
           E FK F ++  R Y + EE   R + F     Q    + E  GT+EF     SD + EE 
Sbjct: 40  EAFKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEF 99

Query: 117 LCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRK-KNVTGPAGDQAACGS 175
               G       Y R       + + +   E +  VP   DWRK      P  DQ  C  
Sbjct: 100 GQLYG-------YRRAAGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNC 152

Query: 176 CWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCS 235
           CWA + AG                        +E  + I     V+ S  +L++C +   
Sbjct: 153 CWAMAAAGN-----------------------IETLWRISFWDFVDVSVQELLDCGRCGD 189

Query: 236 GCDGCF-FEPSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHF-NGS 293
           GC G F ++  I   + +GL SEKDYP++     +    + K   K+   +DF+   N  
Sbjct: 190 GCHGGFVWDAFITVLNNSGLASEKDYPFQGK--VRAHSCHPKKYQKVAWIQDFIMLQNNE 247

Query: 294 ETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGK------- 346
             + + L  YGP++V +N   +  Y    I+    TC P  + H+VLLVG+G        
Sbjct: 248 HRIAQYLATYGPITVTINMKPLRLYRKGVIKATPITCDPQLVDHSVLLVGFGSIKSEEGI 307

Query: 347 -------------QDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
                            PYW+++NSWG    ++G+F++ RG+N CGI +    A +
Sbjct: 308 LAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLTARV 363


>gi|307141900|gb|ADN34745.1| putative cysteine peptidase [Echinococcus granulosus]
          Length = 218

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 116/243 (47%), Gaps = 41/243 (16%)

Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
           VPD+ DWRKK +  P  DQ  CGSCWAFS                         G LEGQ
Sbjct: 7   VPDSIDWRKKGLVTPIKDQGDCGSCWAFSAT-----------------------GALEGQ 43

Query: 212 YAIKTGKLVEFSKSQLVECAKQCS--GCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEK 269
              K GKL+  S+ QLV+C+      GC+G +   +  Y  Q G ESE DYPY   +G  
Sbjct: 44  LKRKKGKLISLSEQQLVDCSTDMGNEGCNGGYMNDAFRYWMQNGAESESDYPYTAMDG-- 101

Query: 270 FKCAYDKSKVKLFTGKDFLHF--NGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRK-- 325
            KC ++ SKV     K F+       + +K  + + GP+SV +++      +G  + K  
Sbjct: 102 -KCKFNSSKVVTKVSK-FVKVPKKREDQLKLSVAQVGPVSVAIDA----ASSGFMLYKKG 155

Query: 326 --NDETCSPYDLGHAVLLVGY-GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIE 381
              D TCS   L HAVL+VGY        YW+V+NSWG      G+  + R   N CGI 
Sbjct: 156 IYQDNTCSQQYLDHAVLVVGYDADMAGQKYWIVKNSWGEDWGQRGYIWMARDKGNMCGIA 215

Query: 382 QIA 384
            +A
Sbjct: 216 TMA 218


>gi|332217574|ref|XP_003257933.1| PREDICTED: cathepsin O [Nomascus leucogenys]
          Length = 318

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 140/316 (44%), Gaps = 48/316 (15%)

Query: 74  KRGRQYANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYER 131
            R R+ A   E   R  Y             YG ++FS   PEE          +  Y R
Sbjct: 33  SREREAAAFRESLNRHRYLNSLFPSENSTAFYGINQFSYLFPEEF---------KAIYLR 83

Query: 132 IVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNY 188
             +   K  +   EV    P   +P  +DWR K+V     +Q  CG CWAFS+ G     
Sbjct: 84  --SKPSKFPRYSAEVHMSIPNVSLPLKFDWRDKHVVTQVRNQQMCGGCWAFSVVGA---- 137

Query: 189 LLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEY 248
                              +E  YAIK   L + S  Q+++C+    GC+G     ++ +
Sbjct: 138 -------------------VESAYAIKGKPLEDLSVQQVIDCSYNNYGCNGGSTLNALNW 178

Query: 249 TH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYG 304
            +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N  + M K L  +G
Sbjct: 179 LNKMQVKLVKDSEYPFKAQNGLCHYFLGSHSGFSIKGYSAYDFS--NQEDEMAKALLTFG 236

Query: 305 PLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGP 364
           PL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + PYW+VRNSWG    
Sbjct: 237 PLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSSWG 293

Query: 365 DEGFFKIERGNNACGI 380
            +G+  ++ G+N CGI
Sbjct: 294 VDGYAHVKMGSNVCGI 309


>gi|357474527|ref|XP_003607548.1| Cysteine protease [Medicago truncatula]
 gi|358347211|ref|XP_003637653.1| Cysteine protease [Medicago truncatula]
 gi|355503588|gb|AES84791.1| Cysteine protease [Medicago truncatula]
 gi|355508603|gb|AES89745.1| Cysteine protease [Medicago truncatula]
          Length = 345

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 158/348 (45%), Gaps = 55/348 (15%)

Query: 60  DNENILETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHERYGTSEFSDRSPEEILCK 119
           D+ NI E  + ++V  G+ Y + +E + R + FK       E     E S+ +    L K
Sbjct: 33  DDSNIYEKHEQWMVHYGKVYKDLQERENRLKIFK-------ENVNYIEASNNAGNNKLYK 85

Query: 120 TGF-KWSERTYERIVADREKVE-KMLMEVEK-------DGPVPDAWDWRKKNVTGPAGDQ 170
            G  ++++ T E  +A R K +  M   + K       +  VP   DWRKK    P  +Q
Sbjct: 86  LGINQFADLTNEEFIASRNKFKGHMCSSITKTSTFKYENASVPSTVDWRKKGAVTPVKNQ 145

Query: 171 AACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVEC 230
             CG CWAFS                            EG + + TGKLV  S+ +LV+C
Sbjct: 146 GQCGCCWAFSAV-----------------------AATEGIHKLSTGKLVSLSEQELVDC 182

Query: 231 AKQC--SGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGEKFKCAYDKSKVK--LFTGK 285
             +    GC+G   + + ++  Q  GL +E  YPY+  +G    C+ +K+ +     TG 
Sbjct: 183 DTKGVDQGCEGGLMDDAFKFIIQNHGLNTEAQYPYQGVDG---TCSANKASIHAVTITGY 239

Query: 286 DFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYG 345
           + +  N  + ++K +    P+SV +++    D+          +C   +L H V  VGYG
Sbjct: 240 EDVPANNEQALQKAVANQ-PISVAIDASG-SDFQFYKSGVFTGSCGT-ELDHGVTAVGYG 296

Query: 346 -KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYAT 388
              D   YWLV+NSWG    +EG+ K++RG +A    CGI   A Y T
Sbjct: 297 VGNDGTKYWLVKNSWGTDWGEEGYIKMQRGVDAAEGLCGIAMEASYPT 344


>gi|402870704|ref|XP_003899346.1| PREDICTED: cathepsin O [Papio anubis]
          Length = 321

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 143/318 (44%), Gaps = 50/318 (15%)

Query: 74  KRGRQY--ANDEEIKERFEYFKQ--DGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTY 129
           +R R++  A   E   R  Y      G      YG ++FS   PEE          +  Y
Sbjct: 34  QRSREHEAAAFRESLNRHRYLNSLSPGENSTAFYGINQFSYLFPEEF---------KAIY 84

Query: 130 ERIVADREKVEKMLMEVEKDGP---VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFS 186
            R  +   K  +   EV +  P    P  +DWR K+V     +Q  CG CWAFS+ G   
Sbjct: 85  LR--SKPSKFPRYSAEVHRSIPNVSWPLRFDWRDKHVVTQVRNQQTCGGCWAFSVVGA-- 140

Query: 187 NYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSI 246
                                +E  YAIK   L + S  Q+++C+    GC+G     ++
Sbjct: 141 ---------------------VESAYAIKGKPLEDLSVQQVIDCSYTNYGCNGGSTLNAL 179

Query: 247 EYTH--QAGLESEKDYPYKNANG--EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYK 302
            + +  Q  L  + +YP+K  NG    F  ++    +K ++  DF   N  + M K L  
Sbjct: 180 NWLNKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGFSIKGYSAYDFS--NQEDEMAKALLT 237

Query: 303 YGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPI 362
           +GPL V++++    DY G  I+ +   CS  +  HAVL+ G+ K  + PYW+VRNSWG  
Sbjct: 238 FGPLVVIVDAVSWQDYLGGIIQHH---CSSGEANHAVLITGFDKTGSTPYWIVRNSWGSS 294

Query: 363 GPDEGFFKIERGNNACGI 380
              +G+  ++ G+N CGI
Sbjct: 295 WGVDGYAHVKMGSNVCGI 312


>gi|395535911|ref|XP_003769964.1| PREDICTED: cathepsin K [Sarcophilus harrisii]
          Length = 332

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 38/288 (13%)

Query: 106 SEFSDRSPEEILCK-TGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVT 164
           +   D + EE++ K TG K        +   R +    L   + +G  P++ D+RKK   
Sbjct: 79  NHLGDMTSEEVVQKMTGLK--------MPLSRSQNNDTLYIPDWEGRTPESVDYRKKGYV 130

Query: 165 GPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSK 224
            P  +Q  CGSCWAFS  G                        LEGQ   KTGKL+  S 
Sbjct: 131 TPVKNQGQCGSCWAFSSVG-----------------------ALEGQLKKKTGKLLNLSP 167

Query: 225 SQLVECAKQCSGCDGCFFEPSIEYTHQ-AGLESEKDYPYKNANGEKFKCAYDKS-KVKLF 282
             LV+C  +  GC G +   + +Y  +  G++SE  YPY    G+   C Y+ + K    
Sbjct: 168 QNLVDCVSKNDGCGGGYMTNAFQYVQENRGIDSEDAYPYI---GQDESCMYNPTGKAAKC 224

Query: 283 TGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLV 342
            G   +     + +K+ + + GP++V +++ L      +     DE C+  +L HAVL V
Sbjct: 225 RGYREIPEGSEKALKRAVARVGPVAVAIDASLSSFQFYSKGVYYDENCNGDNLNHAVLAV 284

Query: 343 GYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
           GYG Q    +W+++NSWG    ++G+  + R   NACGI  +A +  +
Sbjct: 285 GYGIQRGTKHWIIKNSWGEEWGNKGYILMARNKKNACGIANLASFPKM 332


>gi|256535829|gb|ACU82389.1| cathepsin L 1 [Pheronema raphanus]
          Length = 328

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 141/298 (47%), Gaps = 54/298 (18%)

Query: 104 GTSEFSDRSPEEIL-CKTGFKWSERTYERIVADREKVEKMLMEVEKDGPV--PDAWDWRK 160
           GT+EF+D + +E +    G+K   R         +K+E  + EV+    +   D+ DWR 
Sbjct: 73  GTNEFADMTSKEFVEIMNGYKPELRI--------DKLED-VNEVKNYSSIKLSDSVDWRS 123

Query: 161 KNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLV 220
           K    P  +Q  CGSCWAFS  G                        LEGQY I   KL+
Sbjct: 124 KGAVTPVKNQGQCGSCWAFSSTGS-----------------------LEGQYFINNDKLL 160

Query: 221 EFSKSQLVECAKQC--SGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKCAY--DK 276
            FS+S+LV+C+++   +GC G   + +  Y      E E DYPY   +G    C Y  DK
Sbjct: 161 SFSESELVDCSRRYGNNGCKGGLMDNAFRYWEVYKEELESDYPYVAKDG---PCRYSQDK 217

Query: 277 SKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSD-----LIHDYNGTPIRKNDETCS 331
               + + K+  HF+   +++  +   GP+SV +++      L H    + +    E CS
Sbjct: 218 GVTTISSYKNVPHFS-QISLQDAVRTIGPISVAMDASHKSFQLYH----SGVYSESE-CS 271

Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
              L H VL+VGYG     P+WLV+NSWG     +G+F+I   NN CG+E    Y  +
Sbjct: 272 QTKLDHGVLVVGYGTSSE-PFWLVKNSWGAGWGMDGYFEIAMRNNMCGLETEPSYPIL 328


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.138    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,556,971,813
Number of Sequences: 23463169
Number of extensions: 289673647
Number of successful extensions: 730093
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5424
Number of HSP's successfully gapped in prelim test: 1410
Number of HSP's that attempted gapping in prelim test: 707808
Number of HSP's gapped (non-prelim): 8379
length of query: 392
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 248
effective length of database: 8,980,499,031
effective search space: 2227163759688
effective search space used: 2227163759688
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)