RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy667
(392 letters)
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId:
9606]}
Length = 214
Score = 160 bits (405), Expect = 5e-48
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 27/239 (11%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P WDWR K DQ CGSCWAFS+ G +EGQ+
Sbjct: 2 PPEWDWRSKGAVTKVKDQGMCGSCWAFSVTG-----------------------NVEGQW 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFK 271
+ G L+ S+ +L++C K C G + G LE+E DY Y+
Sbjct: 39 FLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQ---S 95
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
C + K K++ + + L K GP+SV +N+ + Y R CS
Sbjct: 96 CQFSAEKAKVYIQDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCS 155
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATID 390
P+ + HAVLLVGYG++ ++P+W ++NSWG ++G++ + RG+ ACG+ +A A +D
Sbjct: 156 PWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMASSAVVD 214
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens)
[TaxId: 9606]}
Length = 215
Score = 156 bits (394), Expect = 2e-46
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 27/239 (11%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
PD+ D+RKK P +Q CGSCWAFS G LEGQ
Sbjct: 2 PDSVDYRKKGYVTPVKNQGQCGSCWAFSSVG-----------------------ALEGQL 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFK 271
KTGKL+ S LV+C + GC G + + +Y + ++SE YPY +
Sbjct: 39 KKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESC 96
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
K G + + +K+ + + GP+SV +++ L + DE+C+
Sbjct: 97 MYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCN 156
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
+L HAVL VGYG Q +W+++NSWG ++G+ + R NNACGI +A + +
Sbjct: 157 SDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFPKM 215
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]}
Length = 215
Score = 145 bits (367), Expect = 2e-42
Identities = 66/240 (27%), Positives = 96/240 (40%), Gaps = 30/240 (12%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P A DWR + DQ CGSCWAFS G +E Q+
Sbjct: 2 PAAVDWRARGAVTAVKDQGQCGSCWAFSAIG-----------------------NVECQW 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQA---GLESEKDYPYKNANGEK 269
+ L S+ LV C K SGC G + E+ Q + +E YPY + G
Sbjct: 39 FLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGIS 98
Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
C V + L GP++V +++ Y G +
Sbjct: 99 PPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTS---- 154
Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYATI 389
C L H VLLVGY +PYW+++NSW +EG+ +I +G+N C +++ A A +
Sbjct: 155 CVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASSAVV 214
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1
{House-dust mite (Dermatophagoides pteronyssinus)
[TaxId: 6956]}
Length = 302
Score = 147 bits (370), Expect = 6e-42
Identities = 55/326 (16%), Positives = 98/326 (30%), Gaps = 29/326 (8%)
Query: 65 LETFKAFIVKRGRQYANDEEIKERFEYFKQDGHKKHE-RYGTSEFSDRSPEEILCKTGFK 123
++TF+ + + YA E+ + + F + + SD S +E +
Sbjct: 2 IKTFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQSNGGAINHLSDLSLDEFKNRFLMS 61
Query: 124 WSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAG 183
+ + + + +G P D R+ P Q CGS WAFS
Sbjct: 62 AEAFEHLK---TQFDLNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVA 118
Query: 184 KFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFE 243
E Y + ++ ++ +LV+CA Q
Sbjct: 119 -----------------------ATESAYLAYRDQSLDLAEQELVDCASQHGCHGDTIPR 155
Query: 244 PSIEYTHQAGLESEKDYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKY 303
IEY G+ E Y Y + + + + + N +
Sbjct: 156 G-IEYIQHNGVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSA 214
Query: 304 GPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIG 363
+ + + + HAV +VGY + YW+VRNSW
Sbjct: 215 IAVIIGIKDLDAFRHYD-GRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNW 273
Query: 364 PDEGFFKIERGNNACGIEQIAGYATI 389
D G+ + IE+ +
Sbjct: 274 GDNGYGYFAANIDLMMIEEYPYVVIL 299
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId:
9606]}
Length = 316
Score = 146 bits (368), Expect = 2e-41
Identities = 92/354 (25%), Positives = 138/354 (38%), Gaps = 58/354 (16%)
Query: 56 SLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFKQ-----------DGHKKHE-RY 103
SLTFD ++ + + R Y +EE R +++ KH
Sbjct: 1 SLTFD-HSLEAQWTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTM 58
Query: 104 GTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDGPVPDAWDWRKKNV 163
+ F D + EE + + + V + P + DWR+K
Sbjct: 59 AMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYE----------APRSVDWREKGY 108
Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQYAIKTGKLVEFS 223
P +Q CGSCWAFS G LEGQ KTG+L+ S
Sbjct: 109 VTPVKNQGQCGSCWAFSATG-----------------------ALEGQMFRKTGRLISLS 145
Query: 224 KSQLVECAKQCS--GCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFKCAYDKSKVK 280
+ LV+C+ GC+G + + +Y G L+SE+ YPY + C Y+
Sbjct: 146 EQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPY---EATEESCKYNPKYSV 202
Query: 281 LFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSPYDLGHAVL 340
+ + K + GP+SV +++ + CS D+ H VL
Sbjct: 203 ANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVL 262
Query: 341 LVGYG----KQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYATI 389
+VGYG + DN YWLV+NSWG G+ K+ + N CGI A Y T+
Sbjct: 263 VVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYPTV 316
>g8pch.1 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [TaxId:
9823]}
Length = 228
Score = 142 bits (359), Expect = 4e-41
Identities = 73/240 (30%), Positives = 102/240 (42%), Gaps = 30/240 (12%)
Query: 152 VPDAWDWRKK-NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEG 210
P + DWRKK N P +Q +CGSCW FS G LE
Sbjct: 9 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTG-----------------------ALES 45
Query: 211 QYAIKTGKLVEFSKSQLVECAKQCSGCD---GCFFEPSIEYTHQAGLESEKDYPYKNANG 267
AI TGK++ ++ QLV+CA+ + G + + G+ E YPYK +
Sbjct: 46 AVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDD 105
Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNS-DLIHDYNGTPIRKN 326
+ + N E M + + Y P+S + Y
Sbjct: 106 HCKFQPDKA--IAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSST 163
Query: 327 DETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGY 386
+P + HAVL VGYG+++ IPYW+V+NSWGP G+F IERG N CG+ A Y
Sbjct: 164 SCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASY 223
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens)
[TaxId: 9606]}
Length = 217
Score = 141 bits (355), Expect = 1e-40
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 31/242 (12%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
PD+ DWR+K Q +CG+CWAFS G LE Q
Sbjct: 2 PDSVDWREKGCVTEVKYQGSCGACWAFSAVG-----------------------ALEAQL 38
Query: 213 AIKTGKLVEFSKSQLVECA---KQCSGCDGCFFEPSIEYTHQA-GLESEKDYPYKNANGE 268
+KTGKLV S LV+C+ GC+G F + +Y G++S+ YPYK +
Sbjct: 39 KLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-- 96
Query: 269 KFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDE 328
+ K + + L + + +K+ + GP+SV +++ + +
Sbjct: 97 QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEP 156
Query: 329 TCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIAGYA 387
+C+ ++ H VL+VGYG + YWLV+NSWG +EG+ ++ R N CGI Y
Sbjct: 157 SCTQ-NVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYP 215
Query: 388 TI 389
I
Sbjct: 216 EI 217
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger
rhizome (Zingiber officinale) [TaxId: 94328]}
Length = 216
Score = 140 bits (354), Expect = 2e-40
Identities = 57/240 (23%), Positives = 94/240 (39%), Gaps = 31/240 (12%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
PD+ DWR+ P +Q CGSCWAFS +EG
Sbjct: 2 PDSIDWRENGAVVPVKNQGGCGSCWAFSTV-----------------------AAVEGIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKC 272
I TG L+ S+ QLV+C GC G + P+ ++ G + ++
Sbjct: 39 QIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNGGINSEETYPYRGQDGICNS 98
Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
+ V + + ++ N E + P+SV +++
Sbjct: 99 TVNAPVVSIDSYENVPSHN--EQSLQKAVANQPVSVTMDAAGRDFQLYRSGIFTG--SCN 154
Query: 333 YDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYAT 388
HA+ +VGYG +++ +W+V+NSWG + G+ + ER + CGI + A Y
Sbjct: 155 ISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPV 214
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId:
3649]}
Length = 218
Score = 136 bits (342), Expect = 1e-38
Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 31/238 (13%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P + DWR K P +Q ACGSCWAFS +EG
Sbjct: 2 PQSIDWRAKGAVTPVKNQGACGSCWAFSTIA-----------------------TVEGIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKC 272
I TG L+E S+ +LV+C K GC G + S++Y G+ + K YPY+ +
Sbjct: 39 KIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANNGVHTSKVYPYQAKQYKCRAT 98
Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCSP 332
TG + N + L ++ + +
Sbjct: 99 -DKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGVFDG---PCG 154
Query: 333 YDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGY 386
L HAV VGYG D Y +++NSWGP ++G+ +++R CG+ + + Y
Sbjct: 155 TKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYY 212
>g1k3b.1 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase I),
catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 233
Score = 135 bits (341), Expect = 2e-38
Identities = 68/250 (27%), Positives = 95/250 (38%), Gaps = 37/250 (14%)
Query: 153 PDAWDWRKK---NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLE 209
P +WDWR N P +QA+CGSC++F+ G MLE
Sbjct: 2 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMG-----------------------MLE 38
Query: 210 GQYAIKTG--KLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANG 267
+ I T + S ++V C++ GC+G F Q E+
Sbjct: 39 ARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTD 98
Query: 268 EKFKCAYDKSKVKLFTGKDFLHFNGS---ETMKKILYKYGPLSVLLNSDLIHDYNGTPIR 324
K D + F G MK L +GP++V + I
Sbjct: 99 SPCKMKEDCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIY 158
Query: 325 KND----ETCSPYDLGHAVLLVGYG--KQDNIPYWLVRNSWGPIGPDEGFFKIERGNNAC 378
+ HAVLLVGYG + YW+V+NSWG + G+F+I RG + C
Sbjct: 159 HHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDEC 218
Query: 379 GIEQIAGYAT 388
IE IA AT
Sbjct: 219 AIESIAVAAT 228
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica
papaya) [TaxId: 3649]}
Length = 216
Score = 133 bits (336), Expect = 7e-38
Identities = 67/243 (27%), Positives = 101/243 (41%), Gaps = 33/243 (13%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P+ DWRKK P Q +CGSCWAFS +EG
Sbjct: 2 PENVDWRKKGAVTPVRHQGSCGSCWAFSAVA-----------------------TVEGIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFKC 272
I+TGKLVE S+ +LV+C ++ GC G + ++EY + G+ YPY A +
Sbjct: 39 KIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKNGIHLRSKYPY-KAKQGTCRA 97
Query: 273 AYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLN-SDLIHDYNGTPIRKNDETCS 331
+ +G + N + + K V+ + Y G E
Sbjct: 98 KQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGIF----EGPC 153
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYA 387
+ HAV VGYGK Y L++NSWG ++G+ +I+R CG+ + + Y
Sbjct: 154 GTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYP 213
Query: 388 TID 390
T +
Sbjct: 214 TKN 216
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia
coronaria) [TaxId: 52861]}
Length = 215
Score = 133 bits (334), Expect = 1e-37
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 34/241 (14%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P DWR K +Q CGSCWAFS +E
Sbjct: 2 PSFVDWRSKGAVNSIKNQKQCGSCWAFSAV-----------------------AAVESIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFK 271
I+TG+L+ S+ +LV+C GC+G + + +Y G ++++++YPY + +
Sbjct: 39 KIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGGIDTQQNYPY---SAVQGS 95
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
C + +V G + N ++ + + + + + I +
Sbjct: 96 CKPYRLRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTGPCGTA 155
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIAGYA 387
H V++VGYG Q YW+VRNSWG ++G+ +ER CGI Q+ Y
Sbjct: 156 QN---HGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYP 212
Query: 388 T 388
T
Sbjct: 213 T 213
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit
(Actinidia chinensis) [TaxId: 3625]}
Length = 218
Score = 133 bits (334), Expect = 2e-37
Identities = 62/242 (25%), Positives = 96/242 (39%), Gaps = 33/242 (13%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P DWR Q CG CWAFS +EG
Sbjct: 2 PSYVDWRSAGAVVDIKSQGECGGCWAFSAIA-----------------------TVEGIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSG--CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEK 269
I TG L+ S+ +L++C + + C+G + ++ G + +E++YPY +GE
Sbjct: 39 KIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGEC 98
Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
++ V + T ++ +E + Y P+SV D D
Sbjct: 99 NVDLQNEKYVTIDTYEN--VPYNNEWALQTAVTYQPVSV--ALDAAGDAFKQYSSGIFTG 154
Query: 330 CSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER---GNNACGIEQIAGY 386
+ HAV +VGYG + I YW+V+NSW +EG+ +I R G CGI + Y
Sbjct: 155 PCGTAIDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSY 214
Query: 387 AT 388
Sbjct: 215 PV 216
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum
[TaxId: 5833]}
Length = 241
Score = 133 bits (334), Expect = 3e-37
Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 45/258 (17%)
Query: 148 KDGPVPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGM 207
++ A+DWR + P DQ CGSCWAFS G
Sbjct: 14 EENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSI-----------------------GS 50
Query: 208 LEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTH-QAGLESEKDYPYKNAN 266
+E QYAI+ KL+ S+ +LV+C+ + GC+G + E G+ + DYPY +
Sbjct: 51 VESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIELGGICPDGDYPYVSDA 110
Query: 267 GEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKN 326
K + +K+ L GP+S+ + + I
Sbjct: 111 PNLCNIDRCTEKYGIKNYLSVPD----NKLKEALRFLGPISISVAVSDDFAFYKEGIFDG 166
Query: 327 DETCSPYDLGHAVLLVGYGKQDNI----------PYWLVRNSWGPIGPDEGFFKIERGNN 376
L HAV+LVG+G ++ + Y++++NSWG + GF IE +
Sbjct: 167 ---ECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDES 223
Query: 377 A----CGIEQIAGYATID 390
CG+ A I+
Sbjct: 224 GLMRKCGLGTDAFIPLIE 241
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia
coronaria) [TaxId: 52861]}
Length = 208
Score = 130 bits (328), Expect = 8e-37
Identities = 67/239 (28%), Positives = 100/239 (41%), Gaps = 37/239 (15%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P+ DWRKK P +Q +CGSCWAFS +E
Sbjct: 2 PEQIDWRKKGAVTPVKNQGSCGSCWAFSTV-----------------------STVESIN 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEKFK 271
I+TG L+ S+ +LV+C K+ GC G F + +Y G ++++ +YPYK G
Sbjct: 39 QIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQG---P 95
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
C KV G + + F +K+ + + S + I
Sbjct: 96 CQAAS-KVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSG---PC 151
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIER--GNNACGIEQIAGYAT 388
L H V +VGY YW+VRNSWG ++G+ ++ R G CGI ++ Y T
Sbjct: 152 GTKLNHGVTIVGY----QANYWIVRNSWGRYWGEKGYIRMLRVGGCGLCGIARLPYYPT 206
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId:
9606]}
Length = 254
Score = 131 bits (330), Expect = 2e-36
Identities = 63/276 (22%), Positives = 96/276 (34%), Gaps = 67/276 (24%)
Query: 153 PDAWDWRKK----NVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGML 208
P ++D R++ DQ +CGSCWAF +
Sbjct: 3 PASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVE-----------------------AI 39
Query: 209 EGQYAIKTGKLV--EFSKSQLVECA--KQCSGCDGCFFEPSIEYTHQAGLESEKDYPYK- 263
+ I T V E S L+ C GC+G + + + + GL S Y
Sbjct: 40 SDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHV 99
Query: 264 ------------NANGEKFKCAYDK-----------------SKVKLFTGKDFLHFNGSE 294
+ NG + C + + K + + N +
Sbjct: 100 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEK 159
Query: 295 TMKKILYKYGPLSVLLN--SDLIHDYNGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPY 352
+ +YK GP+ + SD + +G GHA+ ++G+G ++ PY
Sbjct: 160 DIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQHV----TGEMMGGHAIRILGWGVENGTPY 215
Query: 353 WLVRNSWGPIGPDEGFFKIERGNNACGIEQIAGYAT 388
WLV NSW D GFFKI RG + CGIE
Sbjct: 216 WLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGI 251
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId:
9606]}
Length = 221
Score = 128 bits (322), Expect = 1e-35
Identities = 76/245 (31%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 153 PDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQY 212
P + DWRKK P +Q CGSCWAFS G LEGQ
Sbjct: 2 PKSVDWRKKGYVTPVKNQKQCGSCWAFSAT-----------------------GALEGQM 38
Query: 213 AIKTGKLVEFSKSQLVECAKQCSG--CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEK 269
KTGKLV S+ LV+C++ C+G F + +Y + G L+SE+ YPY ++
Sbjct: 39 FRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAV--DE 96
Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLS--VLLNSDLIHDYNGTPIRKND 327
++ V TG + + + K + GP+S + Y + D
Sbjct: 97 ICKYRPENSVAQDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPD 156
Query: 328 ETCSPYDLGHAVLLVGY--GKQDNIPYWLVRNSWGPIGPDEGFFKIERG-NNACGIEQIA 384
+ D G V+ G+ DN YWLV+NSWGP G+ KI + NN CGI A
Sbjct: 157 CSSKNLDHGVLVVGYGFEGANSDNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAA 216
Query: 385 GYATI 389
Y +
Sbjct: 217 SYPNV 221
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]}
Length = 212
Score = 126 bits (316), Expect = 6e-35
Identities = 60/243 (24%), Positives = 97/243 (39%), Gaps = 35/243 (14%)
Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
+P+ DWR+K P +Q +CGSCWAFS +EG
Sbjct: 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAV-----------------------VTIEGI 37
Query: 212 YAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYPYKNANGEKFK 271
I+TG L E+S+ +L++C ++ GC+G + +++ Q G+ YPY+
Sbjct: 38 IKIRTGNLNEYSEQELLDCDRRSYGCNGGYPWSALQLVAQYGIHYRNTYPYEGVQRYCRS 97
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDETCS 331
K + +N + P+SV+L + +
Sbjct: 98 REKGPYAAKTDGVRQVQPYNEGALLY--SIANQPVSVVLEAAGKDFQLYRGGIFVGPCGN 155
Query: 332 PYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERGNNA----CGIEQIAGYA 387
D HAV VGYG Y L++NSWG + G+ +I+RG CG+ + Y
Sbjct: 156 KVD--HAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYP 209
Query: 388 TID 390
+
Sbjct: 210 VKN 212
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean
(Ricinus communis) [TaxId: 3988]}
Length = 224
Score = 126 bits (316), Expect = 8e-35
Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 34/244 (13%)
Query: 152 VPDAWDWRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCLLIFPGMLEGQ 211
VP + DWRKK DQ CGSCWAFS +EG
Sbjct: 2 VPASVDWRKKGAVTSVKDQGQCGSCWAFSTI-----------------------VAVEGI 38
Query: 212 YAIKTGKLVEFSKSQLVECAKQCSG-CDGCFFEPSIEYTHQAG-LESEKDYPYKNANGEK 269
IKT KLV S+ +LV+C + C+G + + E+ Q G + +E +YPY+ +G
Sbjct: 39 NQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTC 98
Query: 270 FKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDYNGTPIRKNDET 329
+ V + ++ + + +K + + +++ Y+
Sbjct: 99 DVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG---- 154
Query: 330 CSPYDLGHAVLLVGYGKQDN-IPYWLVRNSWGPIGPDEGFFKIERG----NNACGIEQIA 384
+L H V +VGYG + YW V+NSWGP ++G+ ++ERG CGI A
Sbjct: 155 SCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEA 214
Query: 385 GYAT 388
Y
Sbjct: 215 SYPI 218
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId:
9606]}
Length = 275
Score = 121 bits (303), Expect = 2e-32
Identities = 48/257 (18%), Positives = 78/257 (30%), Gaps = 26/257 (10%)
Query: 145 EVEKDGPVPDAWDWRKKNVTGPA------GDQAACGSCWAFSIAGKFSNYLLQYLNHIDQ 198
E +P +WDWR + A CGSCWA + ++ +
Sbjct: 27 EYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWP 86
Query: 199 FCLLIFPGMLEGQYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEK 258
LL +++ A P + + E
Sbjct: 87 STLLSVQNVIDCGNAGSCEG----------GNDLSVWDYAHQHGIPDETCNNYQAKDQEC 136
Query: 259 DYPYKNANGEKFKCAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGPLSVLLNSDLIHDY 318
D + +FK + L+ D+ +G E M +Y GP+S +
Sbjct: 137 DKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGI--MATERL 194
Query: 319 NGTPIRKNDETCSPYDLGHAVLLVGYGKQDNIPYWLVRNSWGPIGPDEGFFKIERG---- 374
E + H V + G+G D YW+VRNSWG + G+ +I
Sbjct: 195 ANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKD 254
Query: 375 ----NNACGIEQIAGYA 387
IE+ +
Sbjct: 255 GKGARYNLAIEEHCTFG 271
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast
(Saccharomyces cerevisiae), Gal6 [TaxId: 4932]}
Length = 458
Score = 43.8 bits (103), Expect = 2e-05
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 337 HAVLLVGYGKQDN---IPYWLVRNSWGPIGPDEGFFKI 371
HA+L+ G + + V NSWG +G + +
Sbjct: 374 HAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVM 411
Score = 28.4 bits (63), Expect = 1.7
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Query: 158 WRKKNVTGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL----LIFPGMLEG--- 210
+ P +Q + G W F+ + +L LN + +F L L F LE
Sbjct: 60 TVVSTDSTPVTNQKSSGRAWLFAATNQLRLNVLSELN-LKEFELSQAYLFFYDKLEKANY 118
Query: 211 --QYAIKTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 261
+ + + S+LV+ DG + + + GL + Y
Sbjct: 119 FLDQIVSSAD--QDIDSRLVQYLLAAPTEDGGQYSMFLNLVKKYGLIPKDLYG 169
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 453
Score = 40.7 bits (95), Expect = 2e-04
Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 292 GSETMKKILYKYGPLSV-LLNSDLIHDYNGTPIRKND--ETCSPYDLGHAVLLVGYGKQD 348
G + K K G + L + +L+ + + K + + HA+ ++D
Sbjct: 324 GCDVGKHFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLTFGE-SLMTHAMTFTAVSEKD 382
Query: 349 ----NIPYWLVRNSWGPIGPDEGFF 369
W V NSWG +G+
Sbjct: 383 DQDGAFTKWRVENSWGEDHGHKGYL 407
Score = 31.4 bits (71), Expect = 0.17
Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%)
Query: 164 TGPAGDQAACGSCWAFSIAGKFSNYLLQYLNHIDQFCL----LIFPGMLEG-----QYAI 214
P +Q + G W FS ++ LN I++F L F +E +
Sbjct: 60 GKPITNQKSSGRSWIFSCLNVMRLPFMKKLN-IEEFEFSQSYLFFWDKVERCYFFLSAFV 118
Query: 215 KTGKLVEFSKSQLVECAKQCSGCDGCFFEPSIEYTHQAGLESEKDYP 261
T + E +LV+ DG ++ + + G+ +K +P
Sbjct: 119 DTAQRKEPEDGRLVQFLLMNPANDGGQWDMLVNIVEKYGVIPKKCFP 165
>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 108
Score = 26.5 bits (58), Expect = 3.0
Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 35 SLTDRITD-QVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK 93
S+TD ++ + A + + F+ + F G + ++K+ F +
Sbjct: 1 SITDILSAEDIAAALQECQDPDT--FE-------PQKFFQTSGLSKMSASQVKDIFRFID 51
Query: 94 QDG 96
D
Sbjct: 52 NDQ 54
>d1k4ta2 d.163.1.2 (A:431-640,A:713-765) Eukaryotic DNA
topoisomerase I, catalytic core {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 27.1 bits (60), Expect = 3.7
Identities = 7/34 (20%), Positives = 16/34 (47%)
Query: 272 CAYDKSKVKLFTGKDFLHFNGSETMKKILYKYGP 305
+ + ++ T K F +N S T+++ L +
Sbjct: 144 NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTA 177
>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId:
10117]}
Length = 109
Score = 25.3 bits (55), Expect = 5.9
Identities = 17/117 (14%), Positives = 37/117 (31%), Gaps = 25/117 (21%)
Query: 35 SLTDRITD-QVVARVDTLAIEGSLTFDNENILETFKAFIVKRGRQYANDEEIKERFEYFK 93
S+TD ++ + + S FD K F G + + +++K+ F
Sbjct: 1 SMTDLLSAEDIKKAIGAFTAADS--FD-------HKKFFQMVGLKKKSADDVKKVFHILD 51
Query: 94 QDGHKKHERYGTSEFSDRSPEEILCKTGFKWSERTYERIVADREKVEKMLMEVEKDG 150
+D + IL + + + + ++ +KDG
Sbjct: 52 KDKSGF--------IEEDELGSILKGFSSDARDLSAKET-------KTLMAAGDKDG 93
>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis
semifasciata) [TaxId: 30493]}
Length = 109
Score = 24.9 bits (54), Expect = 9.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 68 FKAFIVKRGRQYANDEEIKERFEYFKQDG 96
+K F G + D ++KE FE +D
Sbjct: 26 YKRFFHLVGLKGKTDAQVKEVFEILDKDQ 54
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.426
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,537,058
Number of extensions: 75811
Number of successful extensions: 330
Number of sequences better than 10.0: 1
Number of HSP's gapped: 264
Number of HSP's successfully gapped: 38
Length of query: 392
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 305
Effective length of database: 1,213,086
Effective search space: 369991230
Effective search space used: 369991230
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.3 bits)