Query psy6681
Match_columns 537
No_of_seqs 239 out of 2196
Neff 7.4
Searched_HMMs 29240
Date Sat Aug 17 00:22:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6681hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 2.1E-42 7.1E-47 376.4 20.3 264 1-271 47-491 (510)
2 3vw7_A Proteinase-activated re 100.0 4.3E-40 1.5E-44 352.4 23.2 262 1-270 35-468 (484)
3 3uon_A Human M2 muscarinic ace 100.0 3.3E-39 1.1E-43 343.6 25.5 259 1-271 38-462 (467)
4 2rh1_A Beta-2-adrenergic recep 100.0 1.9E-39 6.4E-44 351.7 23.8 259 1-269 55-479 (500)
5 3pbl_A D(3) dopamine receptor, 100.0 6.1E-39 2.1E-43 343.2 26.1 257 1-270 53-475 (481)
6 3eml_A Human adenosine A2A rec 100.0 3.4E-39 1.2E-43 345.0 23.2 262 1-272 36-472 (488)
7 3v2y_A Sphingosine 1-phosphate 100.0 7E-39 2.4E-43 349.2 23.7 257 1-270 78-496 (520)
8 4dkl_A MU-type opioid receptor 100.0 1.5E-38 5.2E-43 337.7 24.9 258 1-267 32-456 (464)
9 3rze_A Histamine H1 receptor, 100.0 2E-38 6.9E-43 336.1 23.9 258 1-271 23-447 (452)
10 3odu_A C-X-C chemokine recepto 100.0 6.2E-39 2.1E-43 344.9 18.1 261 1-271 63-497 (502)
11 2ks9_A Substance-P receptor; w 100.0 4.8E-37 1.7E-41 317.0 29.5 260 1-270 47-325 (364)
12 1u19_A Rhodopsin; G protein-co 100.0 1.8E-37 6.3E-42 317.1 25.8 259 1-268 53-325 (349)
13 4eiy_A Adenosine receptor A2A/ 100.0 1.5E-38 5.2E-43 336.5 17.4 262 1-272 46-431 (447)
14 2lnl_A C-X-C chemokine recepto 100.0 2.7E-37 9.3E-42 310.7 23.9 254 1-267 26-294 (296)
15 2z73_A Rhodopsin; visual pigme 100.0 6.1E-37 2.1E-41 326.3 22.1 260 1-268 49-333 (448)
16 4amj_A Beta-1 adrenergic recep 100.0 4.9E-37 1.7E-41 308.7 18.1 258 1-268 26-302 (315)
17 4ea3_A Fusion protein of nocic 100.0 9.4E-36 3.2E-40 316.6 25.3 261 1-270 140-413 (434)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 7.9E-36 2.7E-40 324.2 19.1 258 1-268 197-492 (514)
19 2koe_A Human cannabinoid recep 98.2 1.5E-07 5.2E-12 65.3 -0.7 36 232-267 3-38 (40)
20 1hll_A Alpha-2A adrenergic rec 98.1 7.6E-07 2.6E-11 58.5 2.1 30 79-108 2-31 (32)
21 2ki9_A Cannabinoid receptor 2; 97.4 1.5E-05 5E-10 52.8 -0.6 29 191-219 1-29 (33)
22 2ket_A Cathelicidin-6; antimic 37.1 18 0.0006 21.5 1.7 14 255-268 4-17 (27)
23 2rh1_A Beta-2-adrenergic recep 35.1 1.9E+02 0.0067 29.6 10.9 60 159-218 43-102 (500)
24 4dkl_A MU-type opioid receptor 34.2 2.8E+02 0.0095 27.5 11.7 27 159-185 20-46 (464)
25 2lot_A Apelin receptor; membra 32.8 10 0.00035 28.6 0.2 17 1-17 43-59 (64)
26 3uon_A Human M2 muscarinic ace 29.3 2.5E+02 0.0086 27.9 10.4 58 161-218 28-85 (467)
27 2z73_A Rhodopsin; visual pigme 27.0 2.8E+02 0.0095 27.6 10.2 24 162-185 40-63 (448)
28 3rze_A Histamine H1 receptor, 26.6 2E+02 0.0068 28.5 8.9 54 165-218 17-70 (452)
29 3sn6_R Lysozyme, beta-2 adrene 23.6 2.7E+02 0.0094 28.5 9.6 59 161-219 187-245 (514)
30 1oix_A RAS-related protein RAB 20.8 21 0.00071 31.9 0.0 10 396-405 5-14 (191)
31 4ea3_A Fusion protein of nocic 20.1 5.7E+02 0.02 25.2 11.0 28 159-186 128-155 (434)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-42 Score=376.41 Aligned_cols=264 Identities=16% Similarity=0.195 Sum_probs=204.7
Q ss_pred CchHHHHHHHHHhcCCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKI---DVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLS 76 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr---~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~ 76 (537)
++||++|++++.+++++| +++|+||+|||++|++++++.+|..++.... ....|.+| .+|++..++..++
T Consensus 47 ~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~------~~~~w~~g~~~C~~~~~~~~~~ 120 (510)
T 4grv_A 47 TVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIW------VHHPWAFGDAGCRGYYFLRDAC 120 (510)
T ss_dssp HHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT------CCSSCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hCCCEEhhHHHHHHHHHHHHHH
Confidence 479999999999876554 7889999999999999999888887765432 22359988 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeeccc--------CcceecccCCCC
Q psy6681 77 AELSVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYR--------KYATCLPFETTT 148 (537)
Q Consensus 77 ~~~Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~--------~~~~C~~~~~~~ 148 (537)
..+|++++++|++|||+||++|++|+..+|++++.++++++|++++++++|+++++.... ....|.+.+..
T Consensus 121 ~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~- 199 (510)
T 4grv_A 121 TYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDT- 199 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCH-
T ss_pred HHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccccccCCCCCCcccccccccc-
Confidence 999999999999999999999999999999999999999999999999999988765221 22346554432
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc------------------------------------------
Q psy6681 149 GVWSLTYIVFLMFINGVAFLILMGCYLKMYCAIRGSQA------------------------------------------ 186 (537)
Q Consensus 149 ~~~~~~~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~------------------------------------------ 186 (537)
.....++.+..++.|++|+++|+++|++|+++++++.+
T Consensus 200 ~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (510)
T 4grv_A 200 ATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKS 279 (510)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCEEEETTEECCCSSSHHHHHH
T ss_pred chhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccccccccccCCCCCCCcccc
Confidence 22244455555666899999999999999999874210
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 187 -------------------------------------------------------------------------------- 186 (537)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (537)
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (510)
T 4grv_A 280 ELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLNNK 359 (510)
T ss_dssp SCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTT
T ss_pred ccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCccccCCCCCCCCCCccccccccC
Confidence
Q ss_pred ----------------------------------------ccccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccccc
Q psy6681 187 ----------------------------------------WNSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLV 226 (537)
Q Consensus 187 ----------------------------------------~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~ 226 (537)
..++++|++||+++|+++|++||+||+++.++..+.....
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~ 439 (510)
T 4grv_A 360 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQ 439 (510)
T ss_dssp CHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC
T ss_pred CCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 1134678999999999999999999999999877653322
Q ss_pred -------chHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhccccc
Q psy6681 227 -------SLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEES 271 (537)
Q Consensus 227 -------~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~ 271 (537)
....+..++.+|+|+||++||+||+++|++||++|+++++|+++.
T Consensus 440 ~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR~aFk~iL~C~C~~ 491 (510)
T 4grv_A 440 WTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFRQVFLSTLACLCPG 491 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC-----------
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCC
Confidence 123455678889999999999999999999999999999875443
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-40 Score=352.37 Aligned_cols=262 Identities=18% Similarity=0.222 Sum_probs=200.9
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++++++|+|++|||++|+++++++++..+.... ...|.+| ..|++..++..++..+
T Consensus 35 i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~--------~~~~~~~~~~C~~~~~~~~~~~~~ 106 (484)
T 3vw7_A 35 LPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFS--------GSDWQFGSELCRFVTAAFYCNMYA 106 (484)
T ss_dssp HHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHT--------TSCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCcccchhHHhHHHHHHHHHHHH
Confidence 479999999999999999999999999999999998765555554432 2248888 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecc----cCcceecccCCCCcc--hh-
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDY----RKYATCLPFETTTGV--WS- 152 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~----~~~~~C~~~~~~~~~--~~- 152 (537)
|++++++|++|||+||++|++|...++.+++.++++++|++++++++|+++++..+ .....|...+..... +.
T Consensus 107 S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 186 (484)
T 3vw7_A 107 SILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTIQVPGLGITTCHDVLSETLLEGYYA 186 (484)
T ss_dssp HHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEEEETTTTEEEESSSCSSCSSCHHHH
T ss_pred HHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCceeeccCCccchhHHHH
Confidence 99999999999999999999999999999999999999999999999988876543 233568765544321 11
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----------------------------------------------
Q psy6681 153 LTYIVFLMFINGVAFLILMGCYLKMYCAIRGSQA---------------------------------------------- 186 (537)
Q Consensus 153 ~~~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~---------------------------------------------- 186 (537)
.++.+..++.+++|+++++++|++|++.++++.+
T Consensus 187 ~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~~~~~~~~~~~~~~~~~~~~ 266 (484)
T 3vw7_A 187 YYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDK 266 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhhhccchhhhhccccccceeeeccccccCCcchhcccccccc
Confidence 2334455666899999999999999999987663
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 187 -------------------------------------------------------------------------------- 186 (537)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (537)
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (484)
T 3vw7_A 267 AIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE 346 (484)
T ss_dssp HHTSCCSSBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHTTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCHHH
T ss_pred cccccCCCCCCcccccccccccccccccccccccccCcccccccccccchhhccccccCccccccchhhhhhhhccchhh
Confidence
Q ss_pred ----------------------------------ccccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccccc----ch
Q psy6681 187 ----------------------------------WNSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLV----SL 228 (537)
Q Consensus 187 ----------------------------------~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~----~~ 228 (537)
+.++++|++|++++++++|++||+||+++.++..+..... ..
T Consensus 347 ~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~ 426 (484)
T 3vw7_A 347 AAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAA 426 (484)
T ss_dssp HHHHHTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHH
T ss_pred hhhhhhhhhhhccCcccccCccceeecchhccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHH
Confidence 2234578999999999999999999999999886542222 23
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccc
Q psy6681 229 EQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEE 270 (537)
Q Consensus 229 ~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~ 270 (537)
..+..++.++.++|+++||+||+++|++||++++++++|.+.
T Consensus 427 ~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~~ll~~~~~ 468 (484)
T 3vw7_A 427 YFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKES 468 (484)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHTSSCC-------------
T ss_pred HHHHHHHHHHHHhccccchHHHHHhhHHHHHHHHHHHhhccC
Confidence 355668889999999999999999999999999999876443
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=3.3e-39 Score=343.59 Aligned_cols=259 Identities=15% Similarity=0.253 Sum_probs=217.7
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++++++|+|++|||++|++++++.+|..+...... .|.+| ..|++..++..++..+
T Consensus 38 ~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~--------~~~~~~~~C~~~~~~~~~~~~~ 109 (467)
T 3uon_A 38 IIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIG--------YWPLGPVVCDLWLALDYVVSNA 109 (467)
T ss_dssp HHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSS--------SCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------CccCCcchHhHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988888777665432 48888 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecc-----cCcceecccCCCCcchhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDY-----RKYATCLPFETTTGVWSLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~-----~~~~~C~~~~~~~~~~~~~ 154 (537)
+++++++|++|||+||++|++|+..++.+++.++++++|++++++++|+++++..+ .....|...+... ..+
T Consensus 110 s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~ 186 (467)
T 3uon_A 110 SVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQFIVGVRTVEDGECYIQFFSN---AAV 186 (467)
T ss_dssp HHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGGS---HHH
T ss_pred HHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCcceeecCcc---hHH
Confidence 99999999999999999999999999999999999999999999999988765432 2344575443321 334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-----------------------------------------------
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW----------------------------------------------- 187 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~----------------------------------------------- 187 (537)
..+..++.+++|+++++++|++|++.++++.+.
T Consensus 187 ~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (467)
T 3uon_A 187 TFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAI 266 (467)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETTEECCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccCcccccCCccccccccccccc
Confidence 455556668999999999999999999876431
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 188 -------------------------------------------------------------------------------- 187 (537)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (537)
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (467)
T 3uon_A 267 GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAA 346 (467)
T ss_dssp SSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHTTCHHHHH
T ss_pred ccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccCCCccccccchhhhcCccccc
Confidence
Q ss_pred ---------------------------------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccccchHHHHHH
Q psy6681 188 ---------------------------------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLVSLEQAKIF 234 (537)
Q Consensus 188 ---------------------------------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~~~~~l~~i 234 (537)
.++++|+++++++++++|++||+|+.++.++..+... .....+..+
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~-~~~~~~~~i 425 (467)
T 3uon_A 347 VNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP-CIPNTVWTI 425 (467)
T ss_dssp HHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST-TSCHHHHHH
T ss_pred cccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc-ccchHHHHH
Confidence 1357899999999999999999999999999887654 344677788
Q ss_pred HHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhccccc
Q psy6681 235 TVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEES 271 (537)
Q Consensus 235 ~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~ 271 (537)
..++.++|+++||+||++++++||++++++|+|++++
T Consensus 426 ~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~~ 462 (467)
T 3uon_A 426 GYWLCYINSTINPACYALCNATFKKTFKHLLMCHYKN 462 (467)
T ss_dssp HHHHHHHTTTHHHHHHHHHCHHHHHHHHHHCC-----
T ss_pred HHHHHHHhhhhhhHHHHHcCHHHHHHHHHHHhhhccC
Confidence 9999999999999999999999999999999765544
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=1.9e-39 Score=351.74 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=210.8
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|++++++.+|..+...... .|.+| ..|++..++..++..+
T Consensus 55 i~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~--------~w~~~~~~C~~~~~~~~~~~~~ 126 (500)
T 2rh1_A 55 VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMK--------MWTFGNFWCEFWTSIDVLCVTA 126 (500)
T ss_dssp HHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT--------SCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCcCCcchhhHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988888777655432 38888 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhh-eeeccc--CcceecccCCC--Ccchhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLF-GISDYR--KYATCLPFETT--TGVWSLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~-~~~~~~--~~~~C~~~~~~--~~~~~~~ 154 (537)
|++++++|++|||+||++|++|+..++.+++.++++++|+++++++++|++ ++.... ....|...+.. ......+
T Consensus 127 Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y 206 (500)
T 2rh1_A 127 SIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAY 206 (500)
T ss_dssp HHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheeeecccccCcceecccccccccchhHHH
Confidence 999999999999999999999999999999999999999999999865553 333221 22345443321 1122334
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-----------------------------------------------
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW----------------------------------------------- 187 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~----------------------------------------------- 187 (537)
..+..++.+++|+++++++|++|++.++++.++
T Consensus 207 ~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (500)
T 2rh1_A 207 AIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAI 286 (500)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccCCCCCCCCCCccccccccccccccc
Confidence 444555567999999999999999998764322
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 188 -------------------------------------------------------------------------------- 187 (537)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (537)
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (500)
T 2rh1_A 287 GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAA 366 (500)
T ss_dssp TSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTCHHHHH
T ss_pred CCCCCCccchhhhhhcccCCccccccccccCCCCCCCCCcccccccchhhcccCCCCccccccccCchhhhhcccccccc
Confidence
Q ss_pred ---------------------------------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccccchHHHHHH
Q psy6681 188 ---------------------------------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLVSLEQAKIF 234 (537)
Q Consensus 188 ---------------------------------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~~~~~l~~i 234 (537)
.++++|++|++++++++|++||+||+++.++..+... ..+..+..+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~-~~~~~~~~~ 445 (500)
T 2rh1_A 367 VNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN-LIRKEVYIL 445 (500)
T ss_dssp HHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-SSCHHHHHH
T ss_pred cccccccccCCCCcccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-cccHHHHHH
Confidence 0246789999999999999999999999998887633 345677788
Q ss_pred HHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhccc
Q psy6681 235 TVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIE 269 (537)
Q Consensus 235 ~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~ 269 (537)
..++.++|+++||+||++ |++||++|+++++|++
T Consensus 446 ~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~~~~ 479 (500)
T 2rh1_A 446 LNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCLRR 479 (500)
T ss_dssp HHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHhhcchhhhc-cHHHHHHHHHHHhhhc
Confidence 899999999999999985 9999999999997543
No 5
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=343.16 Aligned_cols=257 Identities=19% Similarity=0.306 Sum_probs=220.4
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++++++|+|++|||++|++++++.+|..+...... ..|.+| ..|++..++..++..+
T Consensus 53 ~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~-------~~~~~~~~~C~~~~~~~~~~~~~ 125 (481)
T 3pbl_A 53 VFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTG-------GVWNFSRICCDVFVTLDVMMCTA 125 (481)
T ss_dssp HHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTT-------SCCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CccccCcchhhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988888777655432 248887 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCcc---ccccccchhhhHHHHHHHHHHHHhhhhhheeecccCcceecccCCCCcchhhhhH
Q psy6681 80 SVFTLAVITLERNYAITHAMHL---NKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYRKYATCLPFETTTGVWSLTYI 156 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y---~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 156 (537)
+++++++|++|||+||++|++| ....+.+++.++++++|++++++++|+++++........|.... ..+..
T Consensus 126 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C~~~~------~~~~~ 199 (481)
T 3pbl_A 126 SIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSISN------PDFVI 199 (481)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCCSCCC------HHHHH
T ss_pred HHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCCCCcccccC------ccHHH
Confidence 9999999999999999999999 57788899999999999999999999988877666666775432 33455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc------------------------------------------------
Q psy6681 157 VFLMFINGVAFLILMGCYLKMYCAIRGSQAWN------------------------------------------------ 188 (537)
Q Consensus 157 ~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~~------------------------------------------------ 188 (537)
+..++.+++|+++++++|++|++.++++.++.
T Consensus 200 ~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (481)
T 3pbl_A 200 YSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAI 279 (481)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTTEEEESSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeecccccccCCcccccCCCcccchh
Confidence 56666789999999999999999998765431
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 189 -------------------------------------------------------------------------------- 188 (537)
Q Consensus 189 -------------------------------------------------------------------------------- 188 (537)
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (481)
T 3pbl_A 280 GRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAA 359 (481)
T ss_dssp TSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTCHHHHH
T ss_pred ccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCCCCCcccccchhccccccccc
Confidence
Q ss_pred ----------------------------------ccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccccchHHHHHH
Q psy6681 189 ----------------------------------SNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLVSLEQAKIF 234 (537)
Q Consensus 189 ----------------------------------~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~~~~~l~~i 234 (537)
++++|+++++++++++|++||+|+.++.++..+.........+..+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~ 439 (481)
T 3pbl_A 360 VNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSA 439 (481)
T ss_dssp HHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHH
T ss_pred hhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHH
Confidence 1478999999999999999999999999988876554556677888
Q ss_pred HHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccc
Q psy6681 235 TVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEE 270 (537)
Q Consensus 235 ~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~ 270 (537)
..++.++|+++||+||++++++||++++++|+|+++
T Consensus 440 ~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~c~~~ 475 (481)
T 3pbl_A 440 TTWLGYVNSALNPVIYTTFNIEFRKAFLKILSCGRP 475 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC---
T ss_pred HHHHHHHhhccchHHHHHcCHHHHHHHHHHHhccCc
Confidence 999999999999999999999999999999986543
No 6
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3.4e-39 Score=344.95 Aligned_cols=262 Identities=20% Similarity=0.343 Sum_probs=217.3
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.... .|.++ ..|++..++..++..+
T Consensus 36 i~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~----------~~~~~~~~C~~~~~~~~~~~~~ 105 (488)
T 3eml_A 36 ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST----------GFCAACHGCLFIACFVLVLTQS 105 (488)
T ss_dssp HHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT----------CCEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------cccccchHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999888887665332 36666 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecccC-------cceecccCCC-----
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYRK-------YATCLPFETT----- 147 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~~-------~~~C~~~~~~----- 147 (537)
+++++++|++|||++|++|++|+..++.+++.++++++|++++++++|+++++..+.. ...|...+..
T Consensus 106 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 185 (488)
T 3eml_A 106 SIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFED 185 (488)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSSCC-------CCSSCTTCEECCHHH
T ss_pred HHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccccccceeeccc
Confidence 9999999999999999999999999999999999999999999999999987765432 1335433211
Q ss_pred CcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc----------------------------------------
Q psy6681 148 TGVWSLTYIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW---------------------------------------- 187 (537)
Q Consensus 148 ~~~~~~~~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~---------------------------------------- 187 (537)
......+..+..++.+++|+++++++|++|++.++++.++
T Consensus 186 ~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (488)
T 3eml_A 186 VVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAK 265 (488)
T ss_dssp HSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEESSSCHHHHH
T ss_pred cccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccccccceeccccccCCCCccccccc
Confidence 1111222333455667899999999999999999876432
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 188 -------------------------------------------------------------------------------- 187 (537)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (537)
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (488)
T 3eml_A 266 SELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQ 345 (488)
T ss_dssp HHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHHHHHHHCHHHHTTCHHHHHHHHT
T ss_pred cccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhhccccCCCCCCccCCCCcchhhhh
Confidence
Q ss_pred -----------------------------------------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccc-c
Q psy6681 188 -----------------------------------------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVH-L 225 (537)
Q Consensus 188 -----------------------------------------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~-~ 225 (537)
.++++|+++++++++++|++||+|+.++.++..+... .
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~ 425 (488)
T 3eml_A 346 KRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCS 425 (488)
T ss_dssp TCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred ccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccc
Confidence 1356899999999999999999999999998887643 2
Q ss_pred cchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccccc
Q psy6681 226 VSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEESR 272 (537)
Q Consensus 226 ~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~r 272 (537)
.....+..+..++.++|+++||+||++++++||++++++|+|+++++
T Consensus 426 ~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~l~~~~~~~~ 472 (488)
T 3eml_A 426 HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 472 (488)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTSCC
T ss_pred cccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHHHHhhccccc
Confidence 34556777889999999999999999999999999999998765553
No 7
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=7e-39 Score=349.25 Aligned_cols=257 Identities=18% Similarity=0.306 Sum_probs=210.2
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||++|++++.+++++|+++|+|++|||++|++++++.+|..+... ...|.++ ..|++..++..++..+
T Consensus 78 ~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~---------~~~~~~~~~~c~~~~~~~~~~~~~ 148 (520)
T 3v2y_A 78 ILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSG---------ATTYKLTPAQWFLREGSMFVALSA 148 (520)
T ss_dssp HHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSG---------GGGTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHcc---------ccceeeCccccchHHHHHHHHHHH
Confidence 47999999999999999999999999999999999998888766541 1237666 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecccCcceecccCCCCcchhhhhHHHH
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYRKYATCLPFETTTGVWSLTYIVFL 159 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~ 159 (537)
|++++++|++|||+||+ |++|+..++.+++.++++++|++++++++||++++..+.+...|...+... ...|.++.
T Consensus 149 S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~ 224 (520)
T 3v2y_A 149 SVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCISALSSCSTVLPLY---HKHYILFC 224 (520)
T ss_dssp HHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCTTCGGGBCSSSTTB---BHHHHHHH
T ss_pred HHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccccCCCcccccCCcc---chHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999998887777897655422 34455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC------------------------------------------------------
Q psy6681 160 MFINGVAFLILMGCYLKMYCAIRGSQ------------------------------------------------------ 185 (537)
Q Consensus 160 ~~~f~iP~liii~~Y~~I~~~lrk~~------------------------------------------------------ 185 (537)
++.|++|++++++||.+|++.+++++
T Consensus 225 ~~~~~lPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~r~~~~~~~~~~~t~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 304 (520)
T 3v2y_A 225 TTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNG 304 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSSCEECSSSSEEETTTEECCSSSCHHHHHHHHHHHHTSCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhhhhhccccccceeEecccccccccccccccchhhhHHHHhcCC
Confidence 66789999999999999999987643
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 186 -------------------------------------------------------------------------------- 185 (537)
Q Consensus 186 -------------------------------------------------------------------------------- 185 (537)
T Consensus 305 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 384 (520)
T 3v2y_A 305 VITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKS 384 (520)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHHSCHHHHHHHHHHHHHSCHHHHHTCHHHHHHHHTTCHHHHHHHHHHS
T ss_pred cccHHHhhhHHHhccccccccccccccCCCcCCccchhhhHHHHHHHHccCCCcccccccccccccccchhhHhhhhhcc
Confidence
Q ss_pred --------------------------cccccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccc-cchHHHHHHHHHH
Q psy6681 186 --------------------------AWNSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHL-VSLEQAKIFTVFV 238 (537)
Q Consensus 186 --------------------------~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~-~~~~~l~~i~~~l 238 (537)
.+.++++|+++++++++++|++||+||+++.++..+.... ........+..++
T Consensus 385 ~~~~~~~~r~~r~~~~~~~~~~~~~~~~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l 464 (520)
T 3v2y_A 385 RWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVL 464 (520)
T ss_dssp HHHHHSHHHHHHHHHHHHHCSGGGTCSSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHH
T ss_pred chhhhcccchhhHHHHhhcchhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHH
Confidence 0011477899999999999999999999999988765321 1233445567789
Q ss_pred hhhhhhHHHHHHHhcchHHHHHHHHHHhcccc
Q psy6681 239 LPLNSCCNPFLYAILTKQFKKDCVMICKTIEE 270 (537)
Q Consensus 239 ~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~ 270 (537)
+++|+++||+||++++++||++++++++|..+
T Consensus 465 ~~~ns~~NPiiY~~~~~~fr~~~~~~~~~~~~ 496 (520)
T 3v2y_A 465 AVLNSGTNPIIYTLTNKEMRRAFIRIMGRPLE 496 (520)
T ss_dssp HHHGGGTHHHHHHHHCHHHHHHHHTTCCSCC-
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999876443
No 8
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=1.5e-38 Score=337.74 Aligned_cols=258 Identities=21% Similarity=0.309 Sum_probs=210.6
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++++++|+|++|||++|+++++. +|..+...... .|.+| ..|++..++..++..+
T Consensus 32 i~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~--------~~~~~~~~C~~~~~~~~~~~~~ 102 (464)
T 4dkl_A 32 LFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMG--------TWPFGNILCKIVISIDYYNMFT 102 (464)
T ss_dssp HHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHS--------SCCSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhC--------CcccccchhhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999999887 55555444322 38777 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeec--ccCcceecccCCCCcc--hhhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISD--YRKYATCLPFETTTGV--WSLTY 155 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~--~~~~~~C~~~~~~~~~--~~~~~ 155 (537)
+++++++|++|||+||++|++|+..++.+++.++++++|++++++++|+++.... ......|......... ...+.
T Consensus 103 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 182 (464)
T 4dkl_A 103 SIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKYRQGSIDCTLTFSHPTWYWENLLK 182 (464)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEEETTEEECCBCCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecccCCCceEEeecCCcchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888765432 2344567655444332 12233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------------------------------------------------
Q psy6681 156 IVFLMFINGVAFLILMGCYLKMYCAIRGSQA------------------------------------------------- 186 (537)
Q Consensus 156 ~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~------------------------------------------------- 186 (537)
.+..++.+++|+++++++|++|++.++++++
T Consensus 183 ~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 4dkl_A 183 ICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRIDEGLRLKIYKNTEGYYTIGIGHLLTKSPSLNAAKSELDKAIG 262 (464)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHHHHCCEEEEEECTTSCEEEETTEEEESSSCSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccccccccCCCCCccccccccccCCCcccccccccccccc
Confidence 4445555899999999999999999986543
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 187 -------------------------------------------------------------------------------- 186 (537)
Q Consensus 187 -------------------------------------------------------------------------------- 186 (537)
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (464)
T 4dkl_A 263 RNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAV 342 (464)
T ss_dssp SCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHTSCHHHHHHHHHHHHHHCHHHHHTCHHHHHHHHTTCHHHHHH
T ss_pred ccccceecCCccccccccCCcccccccccCCCCCccccCcccccchhhhhccccCCCCCcccccccccchhhcccchhhc
Confidence
Q ss_pred -------------------------------ccccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccc--ccchHHHHH
Q psy6681 187 -------------------------------WNSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVH--LVSLEQAKI 233 (537)
Q Consensus 187 -------------------------------~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~--~~~~~~l~~ 233 (537)
+.++++|+++++++++++|++||+|+.++.++..+... .........
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~ 422 (464)
T 4dkl_A 343 NLAKSRWYNQTPNRAKRVITTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWH 422 (464)
T ss_dssp HHTTSHHHHHSHHHHHHHHHHHHHSSSTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred ccccccccccCccccceeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHH
Confidence 12345799999999999999999999999998876532 223445556
Q ss_pred HHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhc
Q psy6681 234 FTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKT 267 (537)
Q Consensus 234 i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~ 267 (537)
++.++.++|+++||+||++++++||++++++|++
T Consensus 423 ~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~lc~~ 456 (464)
T 4dkl_A 423 FCIALGYTNSCLNPVLYAFLDENFKRCFREFCIP 456 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhchhHHHHHHhhHHHHHHHHHHhcc
Confidence 7888999999999999999999999999998654
No 9
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=336.07 Aligned_cols=258 Identities=17% Similarity=0.306 Sum_probs=212.8
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++++++|+|++|||++|++++++.+|..+...... .|.+| ..|++..++..++..+
T Consensus 23 i~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~--------~~~~~~~~C~~~~~~~~~~~~~ 94 (452)
T 3rze_A 23 VGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMS--------KWSLGRPLCLFWLSMDYVASTA 94 (452)
T ss_dssp HHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSS--------SCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CccCCchhHhHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988888877765432 48887 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeeccc------CcceecccCCCCcchhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYR------KYATCLPFETTTGVWSL 153 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~------~~~~C~~~~~~~~~~~~ 153 (537)
+++++++|++|||++|++|++|+..++.+++.++++++|++++++++| .+++..+. ....|...+... ..
T Consensus 95 s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~~~C~~~~~~~---~~ 170 (452)
T 3rze_A 95 SIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIP-ILGWNHFMQQTSVRREDKCETDFYDV---TW 170 (452)
T ss_dssp HHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHH-HHCCCC-------CCSSSSCCSCTTC---HH
T ss_pred HHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHhcccccccCCCCeecCCCccc---HH
Confidence 999999999999999999999999999999999999999999988765 55444332 234564433222 33
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc----------------------------------------------
Q psy6681 154 TYIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW---------------------------------------------- 187 (537)
Q Consensus 154 ~~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~---------------------------------------------- 187 (537)
+..+..++.+++|+++++++|++|++.++++.++
T Consensus 171 ~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (452)
T 3rze_A 171 FKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKA 250 (452)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEETEECSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccccccccCCCCCcccccccCC
Confidence 4455556668999999999999999999875321
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 188 -------------------------------------------------------------------------------- 187 (537)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (537)
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (452)
T 3rze_A 251 IGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEA 330 (452)
T ss_dssp HTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHHHTSCHHHHHHHHTTCHHHH
T ss_pred CCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCCCCccccCcchhhhcCCccc
Confidence
Q ss_pred ----------------------------------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccccchHHHHH
Q psy6681 188 ----------------------------------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLVSLEQAKI 233 (537)
Q Consensus 188 ----------------------------------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~~~~~l~~ 233 (537)
.++++|+++++++++++|++||+|+.++.++..+.... ....+..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~-~~~~~~~ 409 (452)
T 3rze_A 331 AVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC-CNEHLHM 409 (452)
T ss_dssp HHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-SCTTTHH
T ss_pred cccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc-ccHHHHH
Confidence 22578999999999999999999999999988776443 3345666
Q ss_pred HHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhccccc
Q psy6681 234 FTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEES 271 (537)
Q Consensus 234 i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~ 271 (537)
+..++.++|+++||+||++++++||++++++++|.+++
T Consensus 410 ~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~ 447 (452)
T 3rze_A 410 FTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRSGE 447 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHhcccchhhhhccHHHHHHHHHHHHhcccc
Confidence 88899999999999999999999999999999875543
No 10
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=6.2e-39 Score=344.92 Aligned_cols=261 Identities=19% Similarity=0.263 Sum_probs=215.1
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||++|++++.+++++|+++|+|++|||++|+++++ .+|..+..... .|.+| ..|++..++..++..+
T Consensus 63 ~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~~-~~p~~~~~~~~---------~~~~~~~~C~~~~~~~~~~~~~ 132 (502)
T 3odu_A 63 IVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI-TLPFWAVDAVA---------NWYFGNFLCKAVHVIYTVNLYS 132 (502)
T ss_dssp HHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHT---------CCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc---------CCcCCchhhhhHHHHHHHHHHH
Confidence 4799999999999999999999999999999999964 45554443321 38887 7899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeec--ccCcceecccCCCCcchhhhhHH
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISD--YRKYATCLPFETTTGVWSLTYIV 157 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~--~~~~~~C~~~~~~~~~~~~~~~~ 157 (537)
+++++++|++|||+||++|++|+..++.+++.++++++|++++++++|+++.... ......|...+........+..+
T Consensus 133 s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 212 (502)
T 3odu_A 133 SVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQ 212 (502)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEECCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEeecCCchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999888875543 23455787666554443344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcc--------------------------------------------------
Q psy6681 158 FLMFINGVAFLILMGCYLKMYCAIRGSQAW-------------------------------------------------- 187 (537)
Q Consensus 158 ~~~~~f~iP~liii~~Y~~I~~~lrk~~~~-------------------------------------------------- 187 (537)
..++.+++|+++++++|++|++.++++.++
T Consensus 213 ~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (502)
T 3odu_A 213 HIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGR 292 (502)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHHHTCCEEEEEECTTSCEEEETTEEEECSSCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhhhccccccccCCCccccccccccccCcCccccccchhhhcccCc
Confidence 556668999999999999999999885432
Q ss_pred --------------------------------------------------------------------------------
Q psy6681 188 -------------------------------------------------------------------------------- 187 (537)
Q Consensus 188 -------------------------------------------------------------------------------- 187 (537)
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (502)
T 3odu_A 293 NTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVN 372 (502)
T ss_dssp CCTTBCCHHHHHHHHHHHHHHHHHHHTTCTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHHHH
T ss_pred chhhhhhccccccchhhcccccccccccCccccccccCCCCCCcchhhhhhhhhchhhcccCccccchhhhchhhhhccc
Confidence
Q ss_pred --------------------------------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccc---------cc
Q psy6681 188 --------------------------------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVH---------LV 226 (537)
Q Consensus 188 --------------------------------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~---------~~ 226 (537)
.++++|+++++++++++|++||+|+.++.++..+... ..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~ 452 (502)
T 3odu_A 373 LAKSRWYNQTPNRAKRVITTFRTGTWDAYGSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFEN 452 (502)
T ss_dssp HTTSHHHHHSHHHHHHHHHHHHHCSSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHH
T ss_pred cccccccccCcchhhhccccccccccchhhhhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhcccccc
Confidence 1236899999999999999999999999888765311 11
Q ss_pred chHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhccccc
Q psy6681 227 SLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEES 271 (537)
Q Consensus 227 ~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~ 271 (537)
....+..++.++.++|+++||+||++++++||++++++++|++++
T Consensus 453 ~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~~~~~~ 497 (502)
T 3odu_A 453 TVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSGRPL 497 (502)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHSSCSSC
T ss_pred chHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhccCCch
Confidence 344455678899999999999999999999999999999876554
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=4.8e-37 Score=316.95 Aligned_cols=260 Identities=18% Similarity=0.318 Sum_probs=209.2
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+..... ..|.+| ..|++..++..++..+
T Consensus 47 i~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~--------~~~~~~~~~C~~~~~~~~~~~~~ 118 (364)
T 2ks9_A 47 VVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVH--------NEWYYGLFYCKFHNFFPIAAVFA 118 (364)
T ss_dssp HHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--------TSCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCccchHHHHHhHHHHHHHHHHH
Confidence 4799999999999999999999999999999999988777776654432 247777 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheee--cccCcceecccCCCCc--ch-hhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGIS--DYRKYATCLPFETTTG--VW-SLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~--~~~~~~~C~~~~~~~~--~~-~~~ 154 (537)
+++++++|++|||+||++|++|+ .+.+++.++++++|++++++++|+++... .......|...+.... .+ ..+
T Consensus 119 s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 196 (364)
T 2ks9_A 119 SIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMPSRVVCMIEWPEHPNKIYEKVY 196 (364)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCTTCSSBCCCCSCCCTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecCCCCEEeecCCCcchhHHHHHH
Confidence 99999999999999999999975 68889999999999999999977654322 1223446866543321 11 233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc----------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccc
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW----------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVH 224 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~----------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~ 224 (537)
.....++.+++|+++++++|.+|++.+++++.. .++++|+++++++++++|++||+|+.+..++..+...
T Consensus 197 ~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~ 276 (364)
T 2ks9_A 197 HICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPD 276 (364)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 344455557899999999999999999875422 2356889999999999999999999999888776533
Q ss_pred c---cchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccc
Q psy6681 225 L---VSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEE 270 (537)
Q Consensus 225 ~---~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~ 270 (537)
. .....+..+..++.++|+++||+||++++++||++++++++|+++
T Consensus 277 ~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~~~ 325 (364)
T 2ks9_A 277 LYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF 325 (364)
T ss_dssp SCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHSSSCC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcCC
Confidence 2 123456667788999999999999999999999999999987544
No 12
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.8e-37 Score=317.12 Aligned_cols=259 Identities=20% Similarity=0.299 Sum_probs=213.8
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|++.|+|++|||++|++.++..+|..+..... ..|.+| ..|++..++..++..+
T Consensus 53 i~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~--------~~~~~~~~~C~~~~~~~~~~~~~ 124 (349)
T 1u19_A 53 FPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH--------GYFVFGPTGCNLEGFFATLGGEI 124 (349)
T ss_dssp HHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH--------TSCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhc--------CeeeCChhHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999998888777665432 237777 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecc---cCcceecccCCCC--c-chhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDY---RKYATCLPFETTT--G-VWSL 153 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~---~~~~~C~~~~~~~--~-~~~~ 153 (537)
|++++++|++|||+||++|++|++ ++.+++..+++++|++++++++|+++++..+ .....|...+... . ....
T Consensus 125 s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 203 (349)
T 1u19_A 125 ALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNES 203 (349)
T ss_dssp HHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEETTTTEEECCCSCCCGGGTHHH
T ss_pred HHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCceeecccccCccccccchH
Confidence 999999999999999999999876 7899999999999999999999998876543 2344676544322 1 2223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccccc
Q psy6681 154 TYIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW-------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLV 226 (537)
Q Consensus 154 ~~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~-------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~ 226 (537)
+.....++.+++|+++++++|.+|++.++++.++ .++++|+++++++++++|++||+|+.+..++........
T Consensus 204 ~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~ 283 (349)
T 1u19_A 204 FVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSD 283 (349)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcc
Confidence 3344445557899999999999999999876542 245678999999999999999999999988777654433
Q ss_pred chHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcc
Q psy6681 227 SLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTI 268 (537)
Q Consensus 227 ~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~ 268 (537)
.......+..++.++|+++||+||++++++||++++++++|.
T Consensus 284 ~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~~~~c~ 325 (349)
T 1u19_A 284 FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG 325 (349)
T ss_dssp CCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHHHHTSS
T ss_pred cchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHHhccc
Confidence 445566788899999999999999999999999999998753
No 13
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.5e-38 Score=336.51 Aligned_cols=262 Identities=21% Similarity=0.336 Sum_probs=211.7
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|++++++.+|..+.... .|..+ ..|++..++..++..+
T Consensus 46 i~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~----------~~~~~~~~C~~~~~~~~~~~~~ 115 (447)
T 4eiy_A 46 ILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST----------GFCAACHGCLFIACFVLVLTQS 115 (447)
T ss_dssp HHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHT----------TCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ccccCccHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999998888887665332 25555 8899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecccCc-------ceecccCCCC----
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYRKY-------ATCLPFETTT---- 148 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~~~-------~~C~~~~~~~---- 148 (537)
|++++++|++|||++|++|++|+..++.+++.++++++|++++++++|+++++..+... ..|.......
T Consensus 116 S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 195 (447)
T 4eiy_A 116 SIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFED 195 (447)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHHH
T ss_pred HHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheeccccccCccccccccccccchhhcccc
Confidence 99999999999999999999999999999999999999999999999999877654321 2243221110
Q ss_pred cchhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----------------------------------------
Q psy6681 149 GVWSLTY-IVFLMFINGVAFLILMGCYLKMYCAIRGSQA----------------------------------------- 186 (537)
Q Consensus 149 ~~~~~~~-~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~----------------------------------------- 186 (537)
.....++ .+..++.+++|+++++++|++|++.++++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (447)
T 4eiy_A 196 VVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK 275 (447)
T ss_dssp HSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCccccchhhhccchhhhccCCCCCC
Confidence 0111122 2223344789999999999999999987421
Q ss_pred ---------------------------------------------------------------------ccccchhhhhh
Q psy6681 187 ---------------------------------------------------------------------WNSNDSRIAKR 197 (537)
Q Consensus 187 ---------------------------------------------------------------------~~~~~~r~~k~ 197 (537)
..++++|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~k~ 355 (447)
T 4eiy_A 276 ATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARSTLQKEVHAAKS 355 (447)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhcccccchhhccccchhHHHHHHHHHHHH
Confidence 12457789999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHccc-ccchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccccc
Q psy6681 198 MALLVFTDLLCWFPIALVALTAICGVH-LVSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEESR 272 (537)
Q Consensus 198 L~~ivliFllcwlP~~I~~il~~~~~~-~~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~~r 272 (537)
+++++++|++||+|+.++.++..+... ......+..++.++.++|+++||+||++++++||+++++++++++++.
T Consensus 356 l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~~~r~ 431 (447)
T 4eiy_A 356 LAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ 431 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTC---
T ss_pred HHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999988877543 334556778899999999999999999999999999999998766553
No 14
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=310.74 Aligned_cols=254 Identities=22% Similarity=0.356 Sum_probs=202.4
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.++|++|+++|+|++|||++|+++++.+++...... ..|.+| ..|++..++..++..+
T Consensus 26 v~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~p~~~~~~~----------~~~~~~~~~c~~~~~~~~~~~~~ 95 (296)
T 2lnl_A 26 LLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV----------NGWIFGTFLCKVVSLLKEVNFYS 95 (296)
T ss_dssp HHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHH----------SSSCCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhhhHHHhhcc----------CCCccchhHHHHHhhhhhhhHHH
Confidence 47999999999999999999999999999999999876554443222 138787 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeecccCc---ceecccC--CCCcchhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYRKY---ATCLPFE--TTTGVWSLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~~~---~~C~~~~--~~~~~~~~~ 154 (537)
|++++++|++|||+||++|++|+...+ +++..+++++|++++++++|+.+++..+... ..|.... ........+
T Consensus 96 s~~~l~~isidRy~aI~~P~~~~~~~~-~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (296)
T 2lnl_A 96 GILLLACISVDRYLAIVHATRTLTQKR-HLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVL 174 (296)
T ss_dssp HHHHHHHHHHHHHHHSSSCSSSSCCHH-HHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHH
T ss_pred HHHHHHHHHhhhhhhhhhccccchhhh-hhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeeeeccccchhhHHHH
Confidence 999999999999999999999877654 5677788889999999999888776644221 1222211 112222333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHccccc--------
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLV-------- 226 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~-------- 226 (537)
......+.+++|+.++.++|.++.++++++. .++++|++|++++++++|++||+|+.+..++..+.....
T Consensus 175 ~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~--~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~ 252 (296)
T 2lnl_A 175 RILPHTFGFIVPLFVMLFCYGFTLRTLFKAH--MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERR 252 (296)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHTTTSSSCC--CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhh
Confidence 4445556688999999999999988776654 456789999999999999999999999999887653322
Q ss_pred -chHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhc
Q psy6681 227 -SLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKT 267 (537)
Q Consensus 227 -~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~ 267 (537)
.......++.++.++||++||+||+++|++||++++++++|
T Consensus 253 ~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~ll~c 294 (296)
T 2lnl_A 253 NNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAM 294 (296)
T ss_dssp HHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcC
Confidence 11234567888999999999999999999999999999975
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=6.1e-37 Score=326.26 Aligned_cols=260 Identities=23% Similarity=0.367 Sum_probs=211.7
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYL-GLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAE 78 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~-lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~ 78 (537)
++||+++++++.+++++|++.|+|++|||++|++.+++. ++..+..... ..|.++ ..|++..++..++..
T Consensus 49 i~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~--------~~~~~~~~~C~~~~~~~~~~~~ 120 (448)
T 2z73_A 49 CGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFL--------KKWIFGFAACKVYGFIGGIFGF 120 (448)
T ss_dssp HHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHT--------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhc--------CCccCCHHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999998764 5555443322 247777 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeeccc---CcceecccCCCCcchhh-h
Q psy6681 79 LSVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYR---KYATCLPFETTTGVWSL-T 154 (537)
Q Consensus 79 ~Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~---~~~~C~~~~~~~~~~~~-~ 154 (537)
+|++++++|++|||++|++|++|+..++++++.++++++|++++++++++++++..+. ....|...+........ +
T Consensus 121 ~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 200 (448)
T 2z73_A 121 MSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSN 200 (448)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEECCSCCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecccccCCcchhHH
Confidence 9999999999999999999999999999999999999999999999998888765432 33457554433322223 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc-------------------cccchhhhhhHHHHHHHHHHhhHHHHHH
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW-------------------NSNDSRIAKRMALLVFTDLLCWFPIALV 215 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~-------------------~~~~~r~~k~L~~ivliFllcwlP~~I~ 215 (537)
..+..++.+++|+++++++|++|++.++++.++ .++++|+++++++++++|++||+|+.++
T Consensus 201 ~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~ 280 (448)
T 2z73_A 201 ILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVV 280 (448)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 334444557899999999999999988753211 1236789999999999999999999999
Q ss_pred HHHHHHcccccchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcc
Q psy6681 216 ALTAICGVHLVSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTI 268 (537)
Q Consensus 216 ~il~~~~~~~~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~ 268 (537)
.++..+............+..++.++|+++||+||++++++||+++++++++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~~~~ 333 (448)
T 2z73_A 281 ALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWV 333 (448)
T ss_dssp HHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHCGGG
T ss_pred HHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHHHHH
Confidence 98887764333445666778889999999999999999999999999998753
No 16
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=4.9e-37 Score=308.68 Aligned_cols=258 Identities=19% Similarity=0.252 Sum_probs=208.3
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|++.++..+|..+..... ..|.+| ..|++..++..++..+
T Consensus 26 i~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~--------~~~~~~~~~C~~~~~~~~~~~~~ 97 (315)
T 4amj_A 26 VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVR--------GTWLWGSFLCELWTSLDVLCVTA 97 (315)
T ss_dssp HHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH--------SSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhc--------CCeeccccHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999987777776654432 248887 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeeccc---CcceecccCCC--Ccchhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISDYR---KYATCLPFETT--TGVWSLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~~~---~~~~C~~~~~~--~~~~~~~ 154 (537)
|++++++|++|||+||++|++|+..++++++..+++++|+++++++++|.+...... ....|...... ......+
T Consensus 98 S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 177 (315)
T 4amj_A 98 SIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAY 177 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHHHHHHCTTCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCccccccccccchhhcchHH
Confidence 999999999999999999999999999999999999999999999988876543221 22345433321 1222333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc-------------ccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHH
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAWN-------------SNDSRIAKRMALLVFTDLLCWFPIALVALTAIC 221 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~~-------------~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~ 221 (537)
......+.+++|+++++++|.+|++.++++.++. ++++|+++++++++++|++||+|+.+..++..+
T Consensus 178 ~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~ 257 (315)
T 4amj_A 178 AIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF 257 (315)
T ss_dssp HHHHHCCCCCHHHHHHHHHHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3334444478999999999999999998754321 246799999999999999999999999998877
Q ss_pred cccccchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcc
Q psy6681 222 GVHLVSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTI 268 (537)
Q Consensus 222 ~~~~~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~ 268 (537)
.... .......+..++.++|+++||+||+ ++++||++++++++|.
T Consensus 258 ~~~~-~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~ 302 (315)
T 4amj_A 258 NRDL-VPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFP 302 (315)
T ss_dssp CTTS-SCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC--
T ss_pred cCcc-chHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhCCC
Confidence 6443 3456677788899999999999999 9999999999999763
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=9.4e-36 Score=316.57 Aligned_cols=261 Identities=25% Similarity=0.327 Sum_probs=196.9
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|+++|+|++|||++|+++++ .+|..+...... .|.+| ..|++..++..++..+
T Consensus 140 i~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~~-~~p~~~~~~~~~--------~~~~~~~~C~~~~~~~~~~~~~ 210 (434)
T 4ea3_A 140 LLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL-TLPFQGTDILLG--------FWPFGNALCKTVIAIDYYNMFT 210 (434)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHHT--------SCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHHH-HhHHHHHHHHhc--------CCcCcccHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999854 445444443321 37777 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhheeec--ccCcceecccCCCCcc-h-hhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFGISD--YRKYATCLPFETTTGV-W-SLTY 155 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~~~~--~~~~~~C~~~~~~~~~-~-~~~~ 155 (537)
+++++++|++|||++|++|++|+..++.+++..+++++|++++++++|+++.... ......|......... + ..+.
T Consensus 211 S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 290 (434)
T 4ea3_A 211 STFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLVEIPTPQDYWGPVFA 290 (434)
T ss_dssp HHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEEecCChHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999876654332 1234467654433322 1 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc------cccchhhhhhHHHHHHHHHHhhHHHHHHHHHHHHcccccc--
Q psy6681 156 IVFLMFINGVAFLILMGCYLKMYCAIRGSQAW------NSNDSRIAKRMALLVFTDLLCWFPIALVALTAICGVHLVS-- 227 (537)
Q Consensus 156 ~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~------~~~~~r~~k~L~~ivliFllcwlP~~I~~il~~~~~~~~~-- 227 (537)
.+..++.+++|+++++++|.+|++.+++++.. .++++|+++++++++++|++||+|+.+..++..+......
T Consensus 291 ~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~ 370 (434)
T 4ea3_A 291 ICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSET 370 (434)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHH
Confidence 44555557899999999999999999876532 2446789999999999999999999999988776533222
Q ss_pred hHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcccc
Q psy6681 228 LEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTIEE 270 (537)
Q Consensus 228 ~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~~~ 270 (537)
...+..++.++.++|+++||+||++++++||++++++|++.+.
T Consensus 371 ~~~~~~~~~~l~~~ns~lNPiIY~~~~~~fR~~~~~~~~~~~~ 413 (434)
T 4ea3_A 371 AVAILRFCTALGYVNSCLNPILYAFLDENFKACFRKFCCASAL 413 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc
Confidence 2244556777899999999999999999999999998875443
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=7.9e-36 Score=324.15 Aligned_cols=258 Identities=21% Similarity=0.290 Sum_probs=208.5
Q ss_pred CchHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccc-ccchhhHHHHHHHHHH
Q psy6681 1 MLGNGTVVFVLIFARSKIDVPRFLVCNLAAADFFMGLYLGLLAVVDASTLGEFRMYAIPWQMS-AGCQMAGFMSVLSAEL 79 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~lr~~~n~lLlnLAIaDLl~~l~~lp~~i~~~~~~~~~~~~~~~W~~g-~~C~v~~~l~~~~~~~ 79 (537)
++||+++++++.+++++|++.|+|++|||++|++++++.+|..+...... .|.+| ..|++..++..++..+
T Consensus 197 i~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~--------~~~~~~~~C~~~~~l~~~~~~~ 268 (514)
T 3sn6_R 197 VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTK--------TWTFGNFWCEFWTSIDVLCVTA 268 (514)
T ss_dssp HHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHT--------SCCSCSHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcC--------CeeCCcchhhhHHHHHHHHHHH
Confidence 47999999999999999999999999999999999988888777655432 37777 8999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCccccccccchhhhHHHHHHHHHHHHhhhhhhe-eeccc--CcceecccCC--CCcchhhh
Q psy6681 80 SVFTLAVITLERNYAITHAMHLNKRLSLKHAGYIMVCGWSFAILMAVLPLFG-ISDYR--KYATCLPFET--TTGVWSLT 154 (537)
Q Consensus 80 Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k~~~iii~iiWiislli~i~p~~~-~~~~~--~~~~C~~~~~--~~~~~~~~ 154 (537)
|++++++|++|||++|++|++|+..++++++..+++++|+++++++++|++. +..+. ....|..... .......+
T Consensus 269 S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~y 348 (514)
T 3sn6_R 269 SIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAY 348 (514)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHHTTTTC---CHHHHHHHSSSCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhhccceecccCcccceeecccccccccccHH
Confidence 9999999999999999999999999999999999999999999999777643 32221 2223433221 12222344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcc--------------------------------cccchhhhhhHHHHH
Q psy6681 155 YIVFLMFINGVAFLILMGCYLKMYCAIRGSQAW--------------------------------NSNDSRIAKRMALLV 202 (537)
Q Consensus 155 ~~~~~~~~f~iP~liii~~Y~~I~~~lrk~~~~--------------------------------~~~~~r~~k~L~~iv 202 (537)
..+..++.+++|+++++++|.+|++.++++.++ .++++|+++++++++
T Consensus 349 ~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv 428 (514)
T 3sn6_R 349 AIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIM 428 (514)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHHHHHHH
Confidence 555566668999999999999999998753110 124679999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHcccccchHHHHHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhcc
Q psy6681 203 FTDLLCWFPIALVALTAICGVHLVSLEQAKIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKTI 268 (537)
Q Consensus 203 liFllcwlP~~I~~il~~~~~~~~~~~~l~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~~ 268 (537)
++|++||+|+.++.++..+... .....+..+..++.++|+++||+||+ ++++||++++++++|.
T Consensus 429 ~~F~lcwlP~~i~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~~~ 492 (514)
T 3sn6_R 429 GTFTLCWLPFFIVNIVHVIQDN-LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLR 492 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhCcC
Confidence 9999999999999988877543 33456677888999999999999999 9999999999988653
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.18 E-value=1.5e-07 Score=65.26 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=32.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhcchHHHHHHHHHHhc
Q psy6681 232 KIFTVFVLPLNSCCNPFLYAILTKQFKKDCVMICKT 267 (537)
Q Consensus 232 ~~i~~~l~~lns~iNPiIY~~~nk~FR~~l~~l~~~ 267 (537)
+.++.++.++|+++||+||++++++||+++++++++
T Consensus 3 ~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~ 38 (40)
T 2koe_A 3 FAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS 38 (40)
T ss_dssp HHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence 457778999999999999999999999999988765
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.14 E-value=7.6e-07 Score=58.49 Aligned_cols=30 Identities=30% Similarity=0.505 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHhhccCccccccccc
Q psy6681 79 LSVFTLAVITLERNYAITHAMHLNKRLSLK 108 (537)
Q Consensus 79 ~Sv~~l~~IsIDRYiaI~~Pl~y~~~~t~k 108 (537)
+|++++++|++|||+||++|++|...++.+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~ 31 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPR 31 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 689999999999999999999998887765
No 21
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.44 E-value=1.5e-05 Score=52.83 Aligned_cols=29 Identities=34% Similarity=0.801 Sum_probs=25.5
Q ss_pred chhhhhhHHHHHHHHHHhhHHHHHHHHHH
Q psy6681 191 DSRIAKRMALLVFTDLLCWFPIALVALTA 219 (537)
Q Consensus 191 ~~r~~k~L~~ivliFllcwlP~~I~~il~ 219 (537)
++|++|++++++++|++||+||++..++.
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~ 29 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHS 29 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999999999999999987654
No 22
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=37.07 E-value=18 Score=21.45 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHhcc
Q psy6681 255 KQFKKDCVMICKTI 268 (537)
Q Consensus 255 k~FR~~l~~l~~~~ 268 (537)
++||+.|+++|+++
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 68999999999865
No 23
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=35.09 E-value=1.9e+02 Score=29.55 Aligned_cols=60 Identities=10% Similarity=0.048 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHHHHHHHhhHHHHHHHHH
Q psy6681 159 LMFINGVAFLILMGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDLLCWFPIALVALT 218 (537)
Q Consensus 159 ~~~~f~iP~liii~~Y~~I~~~lrk~~~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il 218 (537)
..+++.+-+++.++.++.++..+.+.++.+....-....|++.=+++.+..+|+.+..++
T Consensus 43 ~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~ 102 (500)
T 2rh1_A 43 MGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL 102 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555666667777777776654322211111222222223344556787766554
No 24
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=34.21 E-value=2.8e+02 Score=27.45 Aligned_cols=27 Identities=7% Similarity=0.048 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Q psy6681 159 LMFINGVAFLILMGCYLKMYCAIRGSQ 185 (537)
Q Consensus 159 ~~~~f~iP~liii~~Y~~I~~~lrk~~ 185 (537)
..+++++-+++.++.++.++..+.+.+
T Consensus 20 ~~~~~~~~~~~gi~gN~lvi~~~~~~~ 46 (464)
T 4dkl_A 20 IMALYSIVCVVGLFGNFLVMYVIVRYT 46 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHeehhhhhcc
Confidence 334444555566666777776666544
No 25
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=32.83 E-value=10 Score=28.56 Aligned_cols=17 Identities=24% Similarity=0.501 Sum_probs=14.4
Q ss_pred CchHHHHHHHHHhcCCC
Q psy6681 1 MLGNGTVVFVLIFARSK 17 (537)
Q Consensus 1 LvGN~lVl~vi~~~k~l 17 (537)
++||++|++++.++|.-
T Consensus 43 l~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 43 TTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp TTSSSSHHHHHHHHSSS
T ss_pred HhhhhhheeeeeEeccc
Confidence 57999999999987754
No 26
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=29.26 E-value=2.5e+02 Score=27.87 Aligned_cols=58 Identities=7% Similarity=0.006 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHHHHHHHhhHHHHHHHHH
Q psy6681 161 FINGVAFLILMGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDLLCWFPIALVALT 218 (537)
Q Consensus 161 ~~f~iP~liii~~Y~~I~~~lrk~~~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il 218 (537)
+++++-+++.++.++.++..+.+.++.+....-....|++.=+++.++.+|..+...+
T Consensus 28 ~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~ 85 (467)
T 3uon_A 28 LVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV 85 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344445555666777766666554322222222222222223344556676655443
No 27
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=26.99 E-value=2.8e+02 Score=27.62 Aligned_cols=24 Identities=13% Similarity=0.048 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC
Q psy6681 162 INGVAFLILMGCYLKMYCAIRGSQ 185 (537)
Q Consensus 162 ~f~iP~liii~~Y~~I~~~lrk~~ 185 (537)
++.+-+++-++.++.++..+.+++
T Consensus 40 ~~~ii~i~gi~gN~lvi~vi~~~~ 63 (448)
T 2z73_A 40 FIGICGIIGCGGNGIVIYLFTKTK 63 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHhhHHHhhhhhhhcc
Confidence 334455555666777777666554
No 28
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=26.57 E-value=2e+02 Score=28.49 Aligned_cols=54 Identities=13% Similarity=0.175 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHHHHHHHhhHHHHHHHHH
Q psy6681 165 VAFLILMGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDLLCWFPIALVALT 218 (537)
Q Consensus 165 iP~liii~~Y~~I~~~lrk~~~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il 218 (537)
+-+++.++.++.++..+.+.++.+....-....|++.=+++.+..+|+.+..++
T Consensus 17 ~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~ 70 (452)
T 3rze_A 17 TICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL 70 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555555544322222222223333233344667777766544
No 29
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=23.58 E-value=2.7e+02 Score=28.46 Aligned_cols=59 Identities=10% Similarity=0.056 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccchhhhhhHHHHHHHHHHhhHHHHHHHHHH
Q psy6681 161 FINGVAFLILMGCYLKMYCAIRGSQAWNSNDSRIAKRMALLVFTDLLCWFPIALVALTA 219 (537)
Q Consensus 161 ~~f~iP~liii~~Y~~I~~~lrk~~~~~~~~~r~~k~L~~ivliFllcwlP~~I~~il~ 219 (537)
+++.+-+++.++.++.++..+.++++.+....-....|++.=+++.++.+|+.+..++.
T Consensus 187 i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~ 245 (514)
T 3sn6_R 187 IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILT 245 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHc
Confidence 33444555566667777766665443222111111112221222334467776665543
No 30
>1oix_A RAS-related protein RAB-11A; small G protein, intracellular trafficking, GTP-binding, lipoprotein, prenylation, protein transport; HET: GDP; 1.7A {Homo sapiens} SCOP: c.37.1.8 PDB: 1oiw_A* 1oiv_A* 3rwo_B* 3rwm_B*
Probab=20.82 E-value=21 Score=31.87 Aligned_cols=10 Identities=60% Similarity=1.335 Sum_probs=0.0
Q ss_pred ccccccCCcc
Q psy6681 396 QNHHHCGIPM 405 (537)
Q Consensus 396 ~~~~~~~~~~ 405 (537)
|||||-|+||
T Consensus 5 ~~~~~~~~~~ 14 (191)
T 1oix_A 5 HHHHHHGIPL 14 (191)
T ss_dssp ----------
T ss_pred cccccCCCCC
Confidence 7889999996
No 31
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=20.15 E-value=5.7e+02 Score=25.17 Aligned_cols=28 Identities=4% Similarity=-0.222 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q psy6681 159 LMFINGVAFLILMGCYLKMYCAIRGSQA 186 (537)
Q Consensus 159 ~~~~f~iP~liii~~Y~~I~~~lrk~~~ 186 (537)
..+++++-+++.++.+..++..+.++++
T Consensus 128 ~~~~~~~i~~~gi~gN~lvi~~i~~~~~ 155 (434)
T 4ea3_A 128 IVGLYLAVCVGGLLGNCLVMYVILRHTK 155 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHeeeeeeecCc
Confidence 3344455556666777777777766543
Done!