Query psy6686
Match_columns 131
No_of_seqs 127 out of 433
Neff 5.8
Searched_HMMs 29240
Date Sat Aug 17 00:29:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6686hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qqy_A Sigma B operon; dodecam 97.7 0.00023 8E-09 49.7 8.3 87 2-100 52-138 (149)
2 2y3q_A Bacterioferritin; metal 97.2 0.0016 5.5E-08 45.9 7.9 85 2-99 48-134 (158)
3 3gvy_A Bacterioferritin; iron 96.9 0.0069 2.4E-07 43.1 9.0 84 2-98 48-133 (161)
4 4am5_A Bacterioferritin; metal 96.9 0.006 2E-07 43.9 8.4 85 3-98 49-133 (159)
5 4etr_A Putative uncharacterize 96.8 0.011 3.8E-07 42.7 9.5 93 2-99 50-145 (153)
6 3uoi_A Bacterioferritin, BFR; 96.8 0.0068 2.3E-07 43.0 7.9 86 2-98 50-135 (161)
7 2fkz_A Bacterioferritin; ferro 96.7 0.0083 2.8E-07 41.8 7.9 83 3-98 49-133 (155)
8 3fvb_A Bacterioferritin; niaid 96.6 0.013 4.3E-07 43.2 8.4 84 2-98 69-154 (182)
9 1jgc_A Bacterioferritin, BFR; 96.5 0.011 3.8E-07 41.6 7.5 87 2-99 48-134 (161)
10 3r2k_A Bacterioferritin, BFR; 96.5 0.016 5.6E-07 40.8 8.3 83 2-98 48-133 (154)
11 3qb9_A Bacterioferritin, BFR; 96.4 0.015 5.1E-07 41.9 7.9 86 2-98 50-135 (174)
12 2vzb_A Putative bacterioferrit 96.3 0.063 2.2E-06 38.0 10.5 93 2-99 59-153 (170)
13 1nfv_A Bacterioferritin; 24 su 96.2 0.023 7.9E-07 41.1 8.1 86 2-98 53-138 (179)
14 1ji5_A DLP-1; dodecamer, four- 96.0 0.028 9.7E-07 39.1 7.5 92 2-97 43-135 (142)
15 2vxx_A Starvation induced DNA 95.7 0.032 1.1E-06 41.4 7.1 91 2-98 70-164 (192)
16 1jig_A DLP-2; dodecamer, four- 95.5 0.054 1.9E-06 37.9 7.3 93 2-97 47-139 (146)
17 1n1q_A DPS protein; four-helix 95.5 0.056 1.9E-06 38.1 7.3 93 2-97 50-142 (149)
18 2fzf_A Hypothetical protein; s 94.8 0.063 2.1E-06 38.8 6.0 90 2-99 59-154 (175)
19 1eum_A Ferritin 1; ECFTNA, met 94.8 0.25 8.5E-06 35.6 9.1 86 3-99 48-134 (165)
20 2jd6_0 Ferritin homolog, ferri 94.7 0.23 7.8E-06 35.7 8.8 86 2-98 47-133 (174)
21 1krq_A Ferritin; H-chain like 94.3 0.29 9.8E-06 35.4 8.5 86 3-99 48-134 (167)
22 1vjx_A Putative ferritin-like 94.2 0.22 7.6E-06 35.5 7.6 89 1-99 51-149 (157)
23 3oj5_A Ferritin family protein 94.1 0.35 1.2E-05 35.5 8.8 87 2-99 52-139 (189)
24 2d5k_A DPS, DPS family protein 94.0 0.19 6.4E-06 35.9 6.9 94 2-98 49-142 (156)
25 3uno_A Probable bacterioferrit 93.9 0.67 2.3E-05 34.5 10.0 86 3-99 53-139 (189)
26 3qz3_A Ferritin; structural ge 93.8 0.3 1E-05 36.2 8.0 86 3-99 57-143 (184)
27 2v8t_A Manganese-containing ps 93.8 0.068 2.3E-06 43.4 4.6 90 3-98 68-191 (302)
28 1rcd_A L ferritin; iron storag 93.8 0.26 8.8E-06 36.0 7.4 86 3-99 57-145 (173)
29 1s3q_A Ferritin; ferroxidase, 93.5 0.51 1.7E-05 34.4 8.7 86 3-99 50-136 (173)
30 2oh3_A Rubrerythrin, COG1633: 93.4 0.16 5.3E-06 36.6 5.6 92 1-100 46-143 (167)
31 2c41_A DPS family DNA-binding 93.4 0.35 1.2E-05 34.3 7.4 95 2-99 52-146 (158)
32 1j30_A 144AA long hypothetical 93.3 0.64 2.2E-05 32.6 8.7 80 3-99 51-133 (144)
33 2v2p_A Ferritin light chain; m 93.2 0.37 1.3E-05 35.2 7.4 86 3-99 56-144 (174)
34 1o9i_A Pseudocatalase; oxidore 92.7 0.69 2.3E-05 36.8 8.8 90 3-98 64-184 (266)
35 2clb_A DPS-like protein; DI-ir 92.4 0.9 3.1E-05 33.5 8.8 96 2-101 67-165 (188)
36 1tjo_A Iron-rich DPSA-homolog 92.3 0.57 1.9E-05 34.3 7.5 95 2-99 71-166 (182)
37 2cih_A Ferritin heavy chain; a 91.9 1.1 3.8E-05 32.9 8.7 86 3-99 61-149 (183)
38 3bvf_A Ferritin; iron storage, 91.7 1.2 4E-05 32.6 8.6 82 3-95 62-144 (181)
39 3e6s_A Ferritin; iron storage, 91.4 1.1 3.7E-05 32.6 8.1 82 3-99 47-135 (168)
40 1vlg_A Ferritin; TM1128, struc 91.2 1.5 5E-05 31.7 8.6 84 3-97 62-146 (176)
41 3a68_A Sferh-4, ferritin-4, ch 90.5 1 3.6E-05 34.1 7.5 91 3-99 89-181 (212)
42 1o9r_A Agrobacterium tumefacie 90.4 1.2 4E-05 32.0 7.3 95 2-98 59-153 (162)
43 3ka8_A Ferritin, middle subuni 90.4 1.2 3.9E-05 32.7 7.4 88 3-99 57-145 (176)
44 2bk6_A Non-heme iron-containin 89.1 1.1 3.9E-05 31.8 6.4 94 2-98 50-145 (156)
45 2yw6_A DNA protection during s 88.7 1.7 5.9E-05 31.9 7.3 93 2-99 58-152 (183)
46 2yjk_A AFP, DPS; metal-binding 88.7 2.2 7.7E-05 30.5 7.8 91 2-97 62-153 (161)
47 2fjc_A Antigen TPF1; mini ferr 88.5 1.3 4.5E-05 31.5 6.4 93 2-97 55-148 (156)
48 2c2j_A DNA-binding stress resp 88.5 1.5 5.1E-05 33.4 7.0 93 2-99 89-183 (211)
49 2chp_A MRGA, metalloregulation 88.4 1.7 5.8E-05 30.8 6.9 92 2-97 54-146 (153)
50 2wlu_A DPS-like peroxide resis 88.4 1.3 4.6E-05 32.3 6.5 94 2-98 69-164 (175)
51 3vnx_A Ferritin; 4-helix bundl 88.3 2.6 9E-05 31.7 8.3 91 3-99 84-176 (204)
52 3k6c_A Uncharacterized protein 87.6 0.65 2.2E-05 31.7 4.0 35 61-100 34-68 (95)
53 3kxu_A Ferritin; iron storage 87.5 2.3 8E-05 31.6 7.4 85 3-99 57-145 (191)
54 2xgw_A Peroxide resistance pro 87.4 1.6 5.4E-05 32.9 6.5 94 2-98 85-180 (199)
55 2cf7_A DPR; peroxide resistanc 87.0 1.9 6.4E-05 31.2 6.5 94 2-98 59-154 (165)
56 2z90_A Starvation-inducible DN 86.3 1.7 5.9E-05 31.2 5.9 93 2-98 60-153 (161)
57 2c2u_A DPS, DNA-binding stress 86.2 1.7 6E-05 32.8 6.2 94 2-98 102-196 (207)
58 3ak8_A DNA protection during s 85.6 2.9 9.8E-05 30.1 6.9 90 2-97 70-160 (167)
59 3kwo_A Putative bacterioferrit 85.3 4 0.00014 28.8 7.4 95 2-98 47-141 (152)
60 4eve_A Neutrophil-activating p 83.7 4.5 0.00015 29.1 7.2 94 2-97 64-157 (164)
61 3iq1_A DPS family protein; csg 82.7 5.2 0.00018 28.4 7.1 93 2-97 60-152 (159)
62 1jm0_A Protein (four-helix bun 80.5 5.3 0.00018 23.6 5.5 40 50-98 4-43 (50)
63 1zpy_A Hypothetical protein NE 80.0 8.4 0.00029 26.1 6.9 33 62-99 35-67 (95)
64 3chh_A P-aminobenzoate N-oxyge 78.6 14 0.00048 29.9 9.1 95 3-101 134-236 (336)
65 1z6o_A Ferritin light chain; m 76.7 14 0.00047 27.8 8.1 80 3-94 81-173 (212)
66 1yuz_A Nigerythrin; rubrythrin 75.7 16 0.00055 27.3 8.2 84 3-99 71-156 (202)
67 1z6o_M Ferritin heavy chain; m 74.3 22 0.00075 26.0 8.5 87 3-98 65-159 (191)
68 2oh3_A Rubrerythrin, COG1633: 72.9 14 0.00049 25.9 7.0 51 49-101 9-59 (167)
69 2hz8_A De novo designed DIIRON 60.8 3.2 0.00011 29.1 1.3 34 61-98 47-80 (115)
70 2pyb_A NAPA, neutrophil activa 59.8 1.1 3.7E-05 31.8 -1.3 93 2-98 47-142 (151)
71 2fzf_A Hypothetical protein; s 56.5 22 0.00076 25.0 5.3 53 44-101 19-71 (175)
72 1vjx_A Putative ferritin-like 55.6 21 0.0007 24.9 5.0 44 50-99 19-62 (157)
73 4a25_A DPS, ferritin DPS famil 49.4 18 0.00062 26.0 3.9 90 2-95 66-155 (169)
74 4di0_A Rubrerythrin; ssgcid, s 46.0 74 0.0025 22.2 7.6 78 3-98 55-134 (144)
75 2gyq_A YCFI, putative structur 45.6 84 0.0029 22.8 7.7 63 53-120 24-91 (173)
76 1lko_A Rubrerythrin all-iron(I 43.4 92 0.0032 22.6 7.6 82 3-99 51-135 (191)
77 3b5o_A CADD-like protein of un 39.6 1.3E+02 0.0045 23.4 8.8 91 8-99 95-191 (244)
78 3pwf_A Rubrerythrin; non heme 38.8 1.1E+02 0.0037 22.1 7.0 36 61-98 84-119 (170)
79 3fse_A Two-domain protein cont 38.7 37 0.0013 27.6 4.6 30 77-106 237-270 (365)
80 2keg_A PLNK; protein, peptide, 34.0 24 0.00082 18.8 1.8 19 22-40 1-19 (32)
81 3hl1_A Ferritin like protein; 31.7 31 0.0011 28.0 2.9 26 3-28 52-77 (317)
82 2e0z_A Virus-like particle; ba 31.1 10 0.00035 30.9 0.0 42 55-101 29-70 (345)
83 1c94_A Retro-GCN4 leucine zipp 30.6 42 0.0014 18.5 2.5 22 45-68 3-24 (38)
84 3arc_X Photosystem II PSBX pro 22.3 35 0.0012 19.4 1.2 19 22-40 3-23 (39)
No 1
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=97.67 E-value=0.00023 Score=49.68 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=68.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...|.+++..+|.+|+. .|- -.....+....+....+-|+.+...|++.++.-... +|..+
T Consensus 52 a~ee~~Ha~~l~e~i~~lgg~p~~-~~~---------~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~~--~D~~t 119 (149)
T 2qqy_A 52 ISDEQGHALYLAEKIKTLGGTPTT-IPL---------RVKQAEDVREMLEYARQSEYETIKRYEKRKEQAANL--NMTEL 119 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCC-CCC---------CCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccCC-CCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 368999999999999999999988 531 112223556778888899999999999988765322 46777
Q ss_pred HHHHHHHHHHHHhHHHhhH
Q psy6686 82 MDVIHKFRDEEQEHHDTGL 100 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A~ 100 (131)
++.|+.+..||.+|...-.
T Consensus 120 ~~~l~~~~~eee~h~~~l~ 138 (149)
T 2qqy_A 120 VVKLEDMIADETNHMEELD 138 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8889999999999987643
No 2
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=97.21 E-value=0.0016 Score=45.92 Aligned_cols=85 Identities=15% Similarity=0.034 Sum_probs=65.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccc--hhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTAL--LPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L--~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|.+|...|.+++..+|.+|+.- .|+ -.+ ....-.+-...+-|+.+...|++.++.-... +|.
T Consensus 48 a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~----------~~~-~~~~e~l~~~l~~E~~~~~~y~~~~~~a~~~--~D~ 114 (158)
T 2y3q_A 48 SIDEMKHADRYIERILFLEGLPNLQDLGKL----------NIG-EDVEEMLRSDLALELDGAKNLREAIGYADSV--HDY 114 (158)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSCCCCC----------CCC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCCCcC----------CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCH
Confidence 3689999999999999999999873 221 011 3455678888889999999999988655332 467
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
.+++.++.+.+||.+|...-
T Consensus 115 ~t~~~l~~~~~ee~~h~~~l 134 (158)
T 2y3q_A 115 VSRDMMIEILRDEEGHIDWL 134 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 78888999999999997653
No 3
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=96.91 E-value=0.0069 Score=43.05 Aligned_cols=84 Identities=17% Similarity=0.092 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcc--chhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTA--LLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~--L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...|-+++..+|.+|.. +.|+ ..--...-.+....+-|..+...|++-+..-.. .+|.
T Consensus 48 a~ee~~Had~l~eri~~lGg~p~~~~~~~~-----------~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~--~~D~ 114 (161)
T 3gvy_A 48 SIEEMHHADKLIQRIIFLGGHPNLQRLNPL-----------RIGQTLRETLDADLAAEHDARTLYIEARDHCEK--VRDY 114 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSCCCCC-----------CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCccCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCH
Confidence 368999999999999999999987 2222 111223445667777888899999998864432 3578
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
.+.+.++.+-.||.+|.+.
T Consensus 115 ~t~~~l~~~~~eEe~h~~~ 133 (161)
T 3gvy_A 115 PSKMLFEELIADEEGHIDY 133 (161)
T ss_dssp HHHTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999643
No 4
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=96.86 E-value=0.006 Score=43.88 Aligned_cols=85 Identities=20% Similarity=0.115 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRELM 82 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~ 82 (131)
.+|.+|...|-+++..+|.+|++- |+.. ..-.-...-.+.+.-+-|..+.+.|++-++.-.. .+|..++
T Consensus 49 ~eE~~HA~~l~~~i~~lGG~p~~~-~~~~--------~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t~ 117 (159)
T 4am5_A 49 IEEMAHADKFVERILFLEGLPNLQ-TLDP--------LRIGQTVKEVLESDLAAEREARALYQEGAAYAAS--VGDFPSK 117 (159)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCS-BCCC--------CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccc-cccc--------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHH
Confidence 589999999999999999999863 2110 0000122445677778899999999987765433 2578888
Q ss_pred HHHHHHHHHHHhHHHh
Q psy6686 83 DVIHKFRDEEQEHHDT 98 (131)
Q Consensus 83 ~~i~~~r~dE~~H~d~ 98 (131)
+.|+.|-+||.+|.+.
T Consensus 118 ~~l~~il~eEeeH~~~ 133 (159)
T 4am5_A 118 NLFEELMGDEEHHIDF 133 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8899999999999765
No 5
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=96.80 E-value=0.011 Score=42.69 Aligned_cols=93 Identities=17% Similarity=0.130 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhc---CchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhc
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALL---GPKGAMACTVAVESVIVDHYNEQLRALMSDPAAN 78 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~---G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~ 78 (131)
..+...|...+..++.++|..|.--..++...--+...+.+++ ++++.+.=...-|+.+.+-|++=|+. . -+
T Consensus 50 a~~~~~~~~eL~~~i~~lGg~p~~~~s~~g~~hr~~~~lks~~~~~~~~~iL~~~~~gE~~~~~~Y~~al~~--~---lp 124 (153)
T 4etr_A 50 SRDCAAAADELERIVLELGGKPKDSTSFAGDLHRRWVDLKSLVTGKDEEAVLNECERGEDVAKHRYQAALEK--S---LP 124 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHS--C---CC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhc--c---CC
Confidence 3577899999999999999999865555443333333333444 57889999999999999999999973 2 35
Q ss_pred HHHHHHHHHHHHHHHhHHHhh
Q psy6686 79 RELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 79 ~~l~~~i~~~r~dE~~H~d~A 99 (131)
++++.+|++.+.++..|+|.=
T Consensus 125 ~~~r~ll~~q~~~~~~~~d~~ 145 (153)
T 4etr_A 125 AEIHQVIERQYQGVLRHHDRV 145 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 777888999999999998864
No 6
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=96.76 E-value=0.0068 Score=43.02 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=62.0
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...|-+++..+|.+|..- ++ +-...--...-.+....+-|..+...|++.+..-.+ .+|..+
T Consensus 50 a~ee~~Had~l~e~i~~lGg~p~~~-~~--------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~--~~D~~t 118 (161)
T 3uoi_A 50 SFDEMRHAEEITDRILLLDGLPNYQ-RI--------GSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCRE--KQDTTS 118 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCS-CC--------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCC-CC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHH
Confidence 3689999999999999999999872 21 111111122345566677788889999988854432 257788
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
.+.++.+-.||.+|.+.
T Consensus 119 ~~~l~~~~~eee~h~~~ 135 (161)
T 3uoi_A 119 AVLLEKIVADEEEHIDY 135 (161)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88899999999999654
No 7
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=96.70 E-value=0.0083 Score=41.85 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccc--hhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTAL--LPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L--~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.+|..|...|-+++..+|.+|..- .|+ ..--...-.+-....-|..+...|++-+..-.+ .+|..
T Consensus 49 ~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~-----------~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~ 115 (155)
T 2fkz_A 49 IDEMKHADKLIKRILFLEGLPNLQELGKL-----------LIGEHTKEMLECDLKLEQAGLPDLKAAIAYCES--VGDYA 115 (155)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCSCCCCC-----------CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHH
Confidence 578999999999999999999874 232 111245566777788888899999987765533 24777
Q ss_pred HHHHHHHHHHHHHhHHHh
Q psy6686 81 LMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~ 98 (131)
+.+.++.+-+||.+|...
T Consensus 116 t~~~l~~~~~eee~h~~~ 133 (155)
T 2fkz_A 116 SRELLEDILESEEDHIDW 133 (155)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888899999999999654
No 8
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=96.56 E-value=0.013 Score=43.19 Aligned_cols=84 Identities=15% Similarity=0.095 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCcc--chhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTA--LLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~--L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...|-+++..+|.+|.. +.|+- .+ -...-.+-...+-|..+.+.|++-++.-. ..+|.
T Consensus 69 a~eE~~Had~laeri~~lGg~p~~~~~~~~~----------~~-~~~~e~l~~~l~~E~~~~~~y~~~i~~A~--~~~D~ 135 (182)
T 3fvb_A 69 SIEEMHHADKLIDRIIFLEGFPNLQTVSPLR----------IG-QNVKEVLEADLKGEYDARASYKESREICD--KLGDY 135 (182)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC----------CC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCcCCCCCCCC----------CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCH
Confidence 368999999999999999999987 33320 11 23344556667778888899988775432 22577
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
.+.+.++.|-.||.+|.+.
T Consensus 136 ~t~~~L~~il~eEe~h~~~ 154 (182)
T 3fvb_A 136 VSKQLFDELLADEEGHIDF 154 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999543
No 9
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=96.49 E-value=0.011 Score=41.63 Aligned_cols=87 Identities=17% Similarity=0.150 Sum_probs=63.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|..|...|-+++..+|.+|..-. + .....--...-.+-....-|..+...|++-+..-.. .+|..+
T Consensus 48 a~ee~~Ha~~l~e~i~~lgg~p~~~~-~--------~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~~t 116 (161)
T 1jgc_A 48 SIEEMGHADKIIARILFLEGHPNLQK-L--------DPLRIGEGPRETLECDLAGEHDALKLYREARDYCAE--VGDIVS 116 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSC-C--------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCC-C--------CcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHH
Confidence 36899999999999999999998632 0 000111244566777788888899999887765432 246778
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
++.++.+-.||.+|...-
T Consensus 117 ~~~l~~~~~ee~~h~~~l 134 (161)
T 1jgc_A 117 KNIFESLITDEEGHVDFL 134 (161)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999997653
No 10
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=96.47 E-value=0.016 Score=40.79 Aligned_cols=83 Identities=12% Similarity=0.123 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcC--chhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLG--PKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G--~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|.+|...|-+++..+|.+|.. .|- .+ ..| ..-.+....+-|..+.+.|++-++.-.+ .+|.
T Consensus 48 a~ee~~had~l~eri~~lGg~p~~-~~~-~~----------~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~--~~D~ 113 (154)
T 3r2k_A 48 MEEETQHADALLRRILLLEGTPRM-RPD-DI----------HPGTTVPEMLEADLKLERHVRAALAKGIALCEQ--HKDF 113 (154)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCC-CCC-CC----------CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCC-CCC-CC----------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCH
Confidence 368999999999999999999998 332 11 122 2345566677788899999988865432 2577
Q ss_pred HHHHHHHHHHHH-HHhHHHh
Q psy6686 80 ELMDVIHKFRDE-EQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~d-E~~H~d~ 98 (131)
.+.+.++.+-.| |.+|.+.
T Consensus 114 ~t~~~l~~~~~e~ee~h~~~ 133 (154)
T 3r2k_A 114 VSRDILKAQLADTEEDHAYW 133 (154)
T ss_dssp HHHHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 888889999999 9999654
No 11
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=96.41 E-value=0.015 Score=41.86 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|..|...|.+++..+|.+|..-. + .-........-.+-...+-|+.+..-|++-++.-... +|..+
T Consensus 50 a~eE~~Ha~~l~e~i~~lgg~p~~~~-i--------~~~~~~~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~--~D~~t 118 (174)
T 3qb9_A 50 SFDEMRHAEEITDRILLLDGLPNYQR-I--------GSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREK--QDTTS 118 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSC-C--------CCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCcccccC-C--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 36899999999999999999998632 0 0011112345667778888999999999887543221 46778
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
++.++.|-+||..|...
T Consensus 119 ~~~l~~~l~eEe~h~~~ 135 (174)
T 3qb9_A 119 AVLLEKIVADEEEHIDY 135 (174)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88899999999999654
No 12
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=96.27 E-value=0.063 Score=38.04 Aligned_cols=93 Identities=15% Similarity=0.154 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchh-HHHHHHHHHHH-HhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLP-FWNVAGFVLGA-GSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~P-lW~~~gf~LGa-~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|.+|...|-+++..+|.+|..-.- ++... .+|. ...-.+..-.+-....-|..+.+.|++.++.-. .. |.
T Consensus 59 a~ee~~Had~lae~i~~lGg~p~~~~~~~~~~~--~~~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~--~~-D~ 133 (170)
T 2vzb_A 59 AEEERHHAQLIADRIIELEGVPVLDPKKWFELA--RCKYDSPTAFDSVSLLNQNVSSERCAILRYQEIANFTN--GK-DY 133 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCGGGHHHHC--SSCCCCCCSCBHHHHHHHHHHHHHHHHHHHHHHHHHHT--TT-CH
T ss_pred HHHHHHHHHHHHHHHHHcCCccCCCHHHHHHhh--cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc-CH
Confidence 368999999999999999999987431 11110 0110 011123456677777889999999999886552 22 77
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
.+.+.+..+-.||.+|...-
T Consensus 134 ~t~~~l~~~~~ee~~h~~~l 153 (170)
T 2vzb_A 134 TTCDIAKHILAEEEEHEQDL 153 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999997653
No 13
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=96.22 E-value=0.023 Score=41.12 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|..|...|.+++..+|.+|.+ .++-.. -.+ -...-.+-...+.|..+...|++-+..-... .|..+
T Consensus 53 a~eE~~Ha~~l~e~i~~lgg~p~~-~~~~~~-------~~~-~~~~e~l~~al~~E~~~~~~y~~l~~~a~~~--~D~~t 121 (179)
T 1nfv_A 53 AIDEMRHAENFAERIKELGGEPTT-QKEGKV-------VTG-QAVPVIYESDADQEDATIEAYSQFLKVCKEQ--GDIVT 121 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCC-CCSSCC-------CCS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcCcC-CCCCcC-------CCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 368999999999999999999976 332100 011 2345678888888999999999988644221 46778
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
++.|..+-+||.+|...
T Consensus 122 ~~~l~~~~~eEe~h~~~ 138 (179)
T 1nfv_A 122 ARLFERIIEEEQAHLTY 138 (179)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88899999999999743
No 14
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=96.04 E-value=0.028 Score=39.06 Aligned_cols=92 Identities=10% Similarity=0.163 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchh-HHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLP-FWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~P-lW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|.+|...+-+||..+|.+|..-.- +-...+ ++....-...+-.+....+-|..+.+.|++-+..-.+ .+|..
T Consensus 43 ~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~--i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~~~~a~~--~~D~~ 118 (142)
T 1ji5_A 43 YTESATHIDEIAERILAIGGKPVATMKEYLEISS--IQEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQN--SDDEM 118 (142)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCC--CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHH
Confidence 368999999999999999999998432 111110 2211111244556677777788999999987764422 24677
Q ss_pred HHHHHHHHHHHHHhHHH
Q psy6686 81 LMDVIHKFRDEEQEHHD 97 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d 97 (131)
..+.+..+-.||.+|..
T Consensus 119 t~~~l~~~l~e~ek~~w 135 (142)
T 1ji5_A 119 TSDLLLGIYTELEKHAW 135 (142)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77779999999999865
No 15
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=95.74 E-value=0.032 Score=41.40 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=64.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh---h-hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS---A-LLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAA 77 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t---a-l~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~ 77 (131)
.++|.+|...+.+||..+|..|..-..-+. -++.+. . ....+-.+....+-|..+.+.|++-+..-.+ .+
T Consensus 70 ~~ee~~had~laErI~~LGg~p~~~~~~~~----~~s~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~~~~i~~a~~--~~ 143 (192)
T 2vxx_A 70 YEQVQDHVHALGERLNGLGGVPVAGFQQLA----ALCCFTPEPEGAFNCRQMLSNDLQAEQAIIGVLRQQATQAES--LG 143 (192)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHH----HHCSSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HT
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHH----HHCcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CC
Confidence 368899999999999999999998433221 111121 1 2334556677777799999999998864422 24
Q ss_pred cHHHHHHHHHHHHHHHhHHHh
Q psy6686 78 NRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 78 ~~~l~~~i~~~r~dE~~H~d~ 98 (131)
|....+.|..+-.||.+|...
T Consensus 144 D~~T~~lL~~~l~eeEkh~w~ 164 (192)
T 2vxx_A 144 DRATAYLYDQILLKTEERAYH 164 (192)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 677777799999999999864
No 16
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=95.53 E-value=0.054 Score=37.90 Aligned_cols=93 Identities=13% Similarity=0.111 Sum_probs=62.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...+-+||..+|.+|..-..-+.-.+..=-.-.+. ..+-.+....+-|+.+.+.|++-+..-.+ .+|...
T Consensus 47 ~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~--~~D~~T 123 (146)
T 1jig_A 47 YNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKE-SAEEMVQTLVNDYSALIQELKEGMEVAGE--AGDATS 123 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHH
Confidence 368999999999999999999987432222111000001111 34455666777788899999988764432 246677
Q ss_pred HHHHHHHHHHHHhHHH
Q psy6686 82 MDVIHKFRDEEQEHHD 97 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d 97 (131)
.+.+..+-.|+.+|..
T Consensus 124 ~~ll~~~l~e~ek~~w 139 (146)
T 1jig_A 124 ADMLLAIHTTLEQHVW 139 (146)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7779999999999865
No 17
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=95.50 E-value=0.056 Score=38.05 Aligned_cols=93 Identities=12% Similarity=0.047 Sum_probs=62.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...+-+||..+|.+|..-..-+.-.+..=-.-.+. ..+-.+....+-|+.+.+.|++-+..-.+ .+|...
T Consensus 50 ~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~~i~~a~~--~~D~~T 126 (149)
T 1n1q_A 50 YTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGE-SAAEMVSSVVNDFVDLVGELKVARDVADE--ADDEAT 126 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHH
Confidence 368999999999999999999987432221111000000111 34456677777799999999998764432 246667
Q ss_pred HHHHHHHHHHHHhHHH
Q psy6686 82 MDVIHKFRDEEQEHHD 97 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d 97 (131)
.+.+..+-.|+.+|..
T Consensus 127 ~~ll~~~l~e~ek~~w 142 (149)
T 1n1q_A 127 ADMLDAIEAGLEKHVW 142 (149)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7779999999999864
No 18
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=94.81 E-value=0.063 Score=38.85 Aligned_cols=90 Identities=14% Similarity=0.151 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHHHHhc-CCCCccchh---HHHHHHHHH--HHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy6686 2 WDQEKAHKAKFEELIRKY-RVRPTALLP---FWNVAGFVL--GAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDP 75 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~-~~RpS~L~P---lW~~~gf~L--Ga~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~ 75 (131)
-++|..|...|.+++.++ |..|. +.+ +|. ++.- +.+....+..-++..-...|.....-|.+.....
T Consensus 59 A~~E~~H~~~l~~~~~~l~g~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~~~Y~~~a~~~---- 131 (175)
T 2fzf_A 59 AEEEKKHEALLRKLYSQMFPGKEV-VFPKEHIGP--ELQPVARELEKVQDIIDLIRWAMKAEEIAAEFYLKLEEMV---- 131 (175)
T ss_dssp HHHTHHHHHHHHHHHHHHSTTCCC-CCCSCCBSC--CCCCCCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC-cchhhhhhh--hhhhhHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 478999999999999976 22221 111 110 0000 0001112345566777788888889999988765
Q ss_pred hhcHHHHHHHHHHHHHHHhHHHhh
Q psy6686 76 AANRELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 76 ~~~~~l~~~i~~~r~dE~~H~d~A 99 (131)
.+++++.++..+..||.+|.+.-
T Consensus 132 -~d~~~r~l~~~ia~eE~~H~~~l 154 (175)
T 2fzf_A 132 -KEEEKKRLMRYLADMERGHYYTL 154 (175)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHH
Confidence 25788888999999999998754
No 19
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=94.77 E-value=0.25 Score=35.58 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+-. + +... ..-...-++-+.-+.|..|.+.|++=++.-.. ++|..+
T Consensus 48 ~eE~~HA~~l~~~i~~~gg~~~l~~-i--------~~p~~~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~--~~D~~~ 116 (165)
T 1eum_A 48 QEEMTHMQRLFDYLTDTGNLPRINT-V--------ESPFAEYSSLDELFQETYKHEQLITQKINELAHAAMT--NQDYPT 116 (165)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCC-B--------CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-C--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChhH
Confidence 6899999999999999999998632 1 1001 11123567888889999999999887765432 257888
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
.+.|+.|-+||.+|.+..
T Consensus 117 ~~fl~~~l~eq~e~~~~l 134 (165)
T 1eum_A 117 FNFLQWYVSEQHEEEKLF 134 (165)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999998765
No 20
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=94.71 E-value=0.23 Score=35.70 Aligned_cols=86 Identities=15% Similarity=0.090 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|.+|...|-+++..+|.+|.+-. + ... ...-...-.+-...+-|..+.+.|++-++.-.. .+|..
T Consensus 47 a~ee~~had~laeri~~lGg~p~~~~-i--------~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~A~~--~~D~~ 115 (174)
T 2jd6_0 47 AEEEIGHALRFYNYIYDRNGRVELDE-I--------PKPPKEWESPLKAFEAAYEHEKFISKSIYELAALAEE--EKDYS 115 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCC-B--------CCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCC-C--------CCCCcCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHh
Confidence 36899999999999999999997421 0 000 011233566777888888888888886643322 25777
Q ss_pred HHHHHHHHHHHHHhHHHh
Q psy6686 81 LMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~ 98 (131)
+.+.|+.|-+||.+|...
T Consensus 116 t~~~l~~~l~eq~e~~~~ 133 (174)
T 2jd6_0 116 TRAFLEWFINEQVEEEAS 133 (174)
T ss_dssp HHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888899999999888765
No 21
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=94.27 E-value=0.29 Score=35.37 Aligned_cols=86 Identities=10% Similarity=0.107 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+-. + +.. ...-...-++-+.-+.|..+.+.|++=++.-.. ++|..+
T Consensus 48 ~eE~~HA~~l~~~i~~~gG~~~l~~-i--------~~p~~~~~~~~e~l~~al~~E~~~~~~~~~l~~~a~~--~~D~~~ 116 (167)
T 1krq_A 48 SEESDHAKKLITYLNETDSHVELQE-V--------KQPEQNFKSLLDVFEKTYEHEQFITKSINTLVEHMLT--HKDYST 116 (167)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCCCCC-C--------CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-C--------CCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChhH
Confidence 6899999999999999999997632 1 000 011123567888889999999999887755432 257888
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
.+.++.|-+||.+|.+..
T Consensus 117 ~~~l~~~l~Eq~e~~~~l 134 (167)
T 1krq_A 117 FNFLQWYVSEQHEEEALF 134 (167)
T ss_dssp HHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999997765
No 22
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=94.17 E-value=0.22 Score=35.50 Aligned_cols=89 Identities=21% Similarity=0.199 Sum_probs=59.1
Q ss_pred ChhHHHHHHHHHHHHHHhcC----------CCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHH
Q psy6686 1 MWDQEKAHKAKFEELIRKYR----------VRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRA 70 (131)
Q Consensus 1 m~~~E~~Hl~~f~~~l~~~~----------~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~ 70 (131)
|-++|..|..+|.++..... +-.+.+.|.|...- .....+...++-.-...|.....-|.+....
T Consensus 51 LA~eE~~H~~~l~~l~~~~~~~~~~~~l~~~~~~~~f~~~~~~~-----~~~~~~~~~~l~~ai~~E~~a~~~Y~~~a~~ 125 (157)
T 1vjx_A 51 LADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEIL-----RRKDLTLKEVLDIAISVEKDSIILYYELKDG 125 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCCCCTTGG-----GCSCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCcchhHHHHHHhhhhhhccchhhhhh-----cccccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35789999999999954210 00111112221110 0022345667777788899999999999988
Q ss_pred hcCCChhcHHHHHHHHHHHHHHHhHHHhh
Q psy6686 71 LMSDPAANRELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 71 L~~~~~~~~~l~~~i~~~r~dE~~H~d~A 99 (131)
. .++.++.++..+-.||.+|...-
T Consensus 126 ~-----~d~~~k~l~~~la~eE~~H~~~l 149 (157)
T 1vjx_A 126 L-----VNSDAQKTVKKIIDQEKEHLRKL 149 (157)
T ss_dssp C-----CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-----CCHHHHHHHHHHHHHHHHHHHHH
Confidence 7 35778888999999999998754
No 23
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=94.12 E-value=0.35 Score=35.48 Aligned_cols=87 Identities=13% Similarity=0.063 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|.+|...|-++|..+|.+|.+-. + ... ...-...-.+-...+-|+.|.+.|++-++.-.+ .+|..
T Consensus 52 a~ee~~Had~laeri~~lGg~p~~~~-i--------~~~~~~~~~~~e~l~~~l~~E~~~~~~~~~l~~~A~~--~~D~~ 120 (189)
T 3oj5_A 52 AVEERNHAMMLVQHLLDRDLRVEIPG-V--------DTVRNQFDRPREALALALDQERTVTDQVGRLTAVARD--EGDFL 120 (189)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCC-B--------CCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCeecCC-C--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHh
Confidence 36899999999999999999998411 0 000 011234456777788888888888886643322 24677
Q ss_pred HHHHHHHHHHHHHhHHHhh
Q psy6686 81 LMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~A 99 (131)
+.+.|+.|-+||.+|...-
T Consensus 121 t~~~l~~~l~eqe~~~~~l 139 (189)
T 3oj5_A 121 GEQFMQWFLQEQIEEVALM 139 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7788999999999986553
No 24
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=94.00 E-value=0.19 Score=35.86 Aligned_cols=94 Identities=9% Similarity=0.023 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...+-+||..+|.+|..-..-|.-.+- +.-...-...+-.+....+-|+.|.+.|++-+..-.+ .+|...
T Consensus 49 ~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~-i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~--~~D~~T 125 (156)
T 2d5k_A 49 YNEASQYVDELAERILAVGGNPVGTLTECLEQSI-VKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGN--AGDDVS 125 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS-SCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHH
Confidence 3689999999999999999999875322221110 0001111133445666677788888888887654322 246667
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
.+.+..+-.|+.+|..-
T Consensus 126 ~~ll~~~l~e~Ek~~w~ 142 (156)
T 2d5k_A 126 EDMFIGMQTSVDKHNWM 142 (156)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77799999999888653
No 25
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=93.85 E-value=0.67 Score=34.53 Aligned_cols=86 Identities=13% Similarity=0.089 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++.++|.+|.+- ++ +.. ...-...-+|-+.-+.|+.|.+.|++=++.-.. .+|..+
T Consensus 53 ~EE~~HA~~l~~~i~~rGG~~~l~-~i--------~~p~~~~~s~~e~le~aL~~Ek~v~~~l~~l~~la~~--~~D~~t 121 (189)
T 3uno_A 53 VEERNHAMMLVQHLLDRDLRVEIP-GV--------DTVRNQFDRPREALALALDQERTVTDQVGRLTAVARD--EGDFLG 121 (189)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCC-CB--------CCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcccC-CC--------CCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHH
Confidence 589999999999999999999752 21 000 001123457788888899999999876643322 257888
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
.+.|+.|-+||.+|-+..
T Consensus 122 ~~fLe~fL~EQve~~~~l 139 (189)
T 3uno_A 122 EQFMQWFLQEQIEEVALM 139 (189)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999997764
No 26
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=93.82 E-value=0.3 Score=36.17 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=63.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+- ++ .... -.-...-++-+.-+.|..|.+.|++=++.-.. .+|..+
T Consensus 57 ~EE~~HA~~l~~~i~~~Gg~~~l~-~i--------~~p~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~--~~D~~t 125 (184)
T 3qz3_A 57 VEEMQHMQRLFTYVSETGALPILG-AI--------AAPRHDFASLGEVFRETYQHEQKITQQINKLAHVAFT--SQDYST 125 (184)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCC-CB--------CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCcccC-CC--------CCcccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHhH
Confidence 589999999999999999999852 11 0000 00122347788888899999999887754432 257888
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
.+.|+.|-+|+.+|-+..
T Consensus 126 ~~fLe~fl~EQve~~~~l 143 (184)
T 3qz3_A 126 FNFLQWYVAEQHEEEKLF 143 (184)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999997765
No 27
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=93.78 E-value=0.068 Score=43.39 Aligned_cols=90 Identities=14% Similarity=0.059 Sum_probs=62.6
Q ss_pred hHHHHHHHHHHHHHHhc--CCCCccc--------hh----------HHHHHHHHHHH-HhhhcCchhHHHH---------
Q psy6686 3 DQEKAHKAKFEELIRKY--RVRPTAL--------LP----------FWNVAGFVLGA-GSALLGPKGAMAC--------- 52 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~--~~RpS~L--------~P----------lW~~~gf~LGa-~tal~G~~~~~a~--------- 52 (131)
-+|..|+..+.+++.++ |+-|... .| -|++.+ ..|+ .+.-.|..|+-++
T Consensus 68 tEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p~~~a~~~~~~~~~i~~-g~g~~p~ds~G~pWta~Yv~~~Gdl~a 146 (302)
T 2v8t_A 68 TEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLGFAKDVRNAAHFIAG-GANSLVMGAMGEHWNGEYVFTSGNLIL 146 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCTTGGGGGSSCSHHHHTS-SSCCCSBCTTSCBCBGGGCCCCSCHHH
T ss_pred HHhccHHHHHHHHHHHHcCCCChhhhhcccccccchHHHhhhcCCcHHHhhc-CCCCCccCCCCCCCCcchhcCCCCHHH
Confidence 47889999999999999 7655542 23 333211 1221 1233454555444
Q ss_pred ----HHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHh
Q psy6686 53 ----TVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 53 ----t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~ 98 (131)
-.+-|..--.+|..+++.. +|+.++++|..++.||..|...
T Consensus 147 DL~~NiaAE~~Ar~~Y~rL~~~t-----dDp~vkd~L~fLi~RE~~H~~~ 191 (302)
T 2v8t_A 147 DLLHNFFLEVAARTHKLRVYEMT-----DNPVAREMIGYLLVRGGVHAAA 191 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-----CChhHHHHHHHHHHHHHHHHHH
Confidence 4677888889999999765 3688899999999999999865
No 28
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=93.77 E-value=0.26 Score=36.00 Aligned_cols=86 Identities=12% Similarity=0.103 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH--hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG--SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~--tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
++|.+|-..|-+++..+|.+|.+- ++ ... ...-...-++-+.-+.|..|.+.|++=++.-.. .+|..
T Consensus 57 ~EE~~HA~~l~~~i~~rgg~~~l~-~i--------~~p~~~~~~~~~e~le~aL~~E~~v~~~l~~l~~~a~~--~~D~~ 125 (173)
T 1rcd_A 57 EEEKEHAEKLIEYQNQRGGRVFLQ-SV--------EKPERDDWANGLEALQTALKLQKSVNQALLDLHAVAAD--KSDPH 125 (173)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCC-CC--------CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCeeecC-CC--------CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHH
Confidence 689999999999999999999863 21 100 011234567888899999999999887765433 25788
Q ss_pred HHHHHH-HHHHHHHhHHHhh
Q psy6686 81 LMDVIH-KFRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~-~~r~dE~~H~d~A 99 (131)
+++.|+ .|-+|+.+|-+..
T Consensus 126 t~~fLe~~~l~eq~e~~~~l 145 (173)
T 1rcd_A 126 MTDFLESPYLSESVETIKKL 145 (173)
T ss_dssp HHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 888899 9999999997654
No 29
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=93.52 E-value=0.51 Score=34.45 Aligned_cols=86 Identities=14% Similarity=0.150 Sum_probs=64.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+-. + +.. ...-...-++-+.-+.|..|.+.|++=++.-.. .+|..+
T Consensus 50 ~EE~~HA~~l~~~i~~~gg~~~l~~-i--------~~p~~~~~~~~e~le~aL~~E~~v~~~~~~l~~~a~~--~~D~~t 118 (173)
T 1s3q_A 50 QEELMHAMKMFDFVSERGGRVKLYA-V--------EEPPSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQ--EKDFAT 118 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCC-B--------CCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-C--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCChhH
Confidence 6899999999999999999997632 1 000 111124567888899999999999887755432 257788
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
++.|+.|-+||.+|.+..
T Consensus 119 ~~fle~~l~eq~e~~~~l 136 (173)
T 1s3q_A 119 YNFLQWYVAEQVEEEASA 136 (173)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888999999999997765
No 30
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=93.40 E-value=0.16 Score=36.56 Aligned_cols=92 Identities=20% Similarity=0.114 Sum_probs=62.2
Q ss_pred ChhHHHHHHHHHHHHHHhcCCCCc--cchhHHHHHHHHHH----HHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy6686 1 MWDQEKAHKAKFEELIRKYRVRPT--ALLPFWNVAGFVLG----AGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSD 74 (131)
Q Consensus 1 m~~~E~~Hl~~f~~~l~~~~~RpS--~L~PlW~~~gf~LG----a~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~ 74 (131)
|-++|..|...|.++..... -|. ...++|.. +... .+....+..-++..-...|..-..-|.+.....
T Consensus 46 LA~eE~~H~~~l~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~a~~~--- 119 (167)
T 2oh3_A 46 MARFSTLHGDEIKQRSRALE-LPKLMSWQYRWKT--PPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAANS--- 119 (167)
T ss_dssp HHHHHHHHHHHHHHHHTTSC-CCCCCGGGTSCCC--CCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHhcCC-CCccccccccCCC--cHhhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 35789999999999987631 121 11111210 0000 123455677788888889999999999887665
Q ss_pred ChhcHHHHHHHHHHHHHHHhHHHhhH
Q psy6686 75 PAANRELMDVIHKFRDEEQEHHDTGL 100 (131)
Q Consensus 75 ~~~~~~l~~~i~~~r~dE~~H~d~A~ 100 (131)
.++.++..+..+-.||.+|.+.-.
T Consensus 120 --~d~~~k~~~~~la~eE~~H~~~l~ 143 (167)
T 2oh3_A 120 --ADPEVKRLGADFAAEEAEHVVALD 143 (167)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357778889999999999988753
No 31
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=93.36 E-value=0.35 Score=34.32 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...+-+||..+|.+|..-..-|.-.+ .+.-.......+-.+....+-|+.|.+.|++-++.-.+ .+|...
T Consensus 52 ~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s-~i~~~~~~~~~~e~l~~~l~~e~~~~~~~~~~i~~a~~--~~D~~T 128 (158)
T 2c41_A 52 GSEVFAMIDELAERSLMLDGQPVADPADYLKVA-TVTPSSGQLTVKQMIEEAIANHELIITEMHQDAEIATE--AGDIGT 128 (158)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHC-CSCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHH
Confidence 368999999999999999999987543222111 01111121233456677777888888888887754322 246667
Q ss_pred HHHHHHHHHHHHhHHHhh
Q psy6686 82 MDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~A 99 (131)
.+.+..+-.|+.+|...=
T Consensus 129 ~~ll~~~l~~~Ek~~w~l 146 (158)
T 2c41_A 129 ADLYTRLVQTHQKHRWFL 146 (158)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777999999999987643
No 32
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=93.31 E-value=0.64 Score=32.60 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=59.9
Q ss_pred hHHHHHHHHHHHHHHh--cCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHH-HHHHHHHHHHhcCCChhcH
Q psy6686 3 DQEKAHKAKFEELIRK--YRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVI-VDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~--~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V-~~Hy~~ql~~L~~~~~~~~ 79 (131)
.+|..|-..|-++|.. +|. |+.-.| .-...-.+-+..+-|..+ ..-|++=++.-.. +++.
T Consensus 51 ~eE~~HA~~~~~~l~~~~lg~-p~~~~p--------------~~~~~e~L~~al~~E~~~~~~~y~~~~~~A~~--egd~ 113 (144)
T 1j30_A 51 EGETAHAFGHLDFIRQGGLTD-PATDKP--------------IGTLEQMIESAIAGETYEWTQMYPGFAKVARE--EGFP 113 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTCBC-TTTSCB--------------CSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--TTCH
T ss_pred HHHHHHHHHHHHHHhhcccCC-CCcCCC--------------CccHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--cCcH
Confidence 5899999999999998 754 643334 122356778888889999 7888876654432 2578
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
.+++.++.+-+||.+|.+.-
T Consensus 114 ~~~~~f~~i~~~E~~H~~~~ 133 (144)
T 1j30_A 114 EVAEWFETLARAEKSHAEKF 133 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999997653
No 33
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=93.17 E-value=0.37 Score=35.18 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=64.4
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH--hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG--SALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~--tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
++|.+|-..+-+++..+|.+|.+- ++ ... ...-...-++-+.-+.|..|.+.|++=++.-.. .+|..
T Consensus 56 ~EE~~HA~~l~~~i~~rgg~~~l~-~i--------~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~--~~D~~ 124 (174)
T 2v2p_A 56 QQKMQGAERLLKMQNQRGGRALFQ-DL--------QKPSQDEWGTTPDAMKAAIVLEKSLNQALLDLHALGSA--QADPH 124 (174)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCC-CC--------CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHcCCccccC-CC--------CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHH
Confidence 689999999999999999999862 21 100 111234457888899999999999887765432 25788
Q ss_pred HHHHHHH-HHHHHHhHHHhh
Q psy6686 81 LMDVIHK-FRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~~-~r~dE~~H~d~A 99 (131)
+++.|+. |-+||.+|-+..
T Consensus 125 t~~fLe~~~l~eq~e~~~~l 144 (174)
T 2v2p_A 125 LCDFLESHFLDEEVKLIKKM 144 (174)
T ss_dssp HHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 8888998 999999996654
No 34
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=92.69 E-value=0.69 Score=36.80 Aligned_cols=90 Identities=16% Similarity=0.072 Sum_probs=61.2
Q ss_pred hHHHHHHHHHHHHHHhcCCC--Cccc-----hhHHHHH--H-----HHH---HH-HhhhcCchhHHHH------------
Q psy6686 3 DQEKAHKAKFEELIRKYRVR--PTAL-----LPFWNVA--G-----FVL---GA-GSALLGPKGAMAC------------ 52 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~R--pS~L-----~PlW~~~--g-----f~L---Ga-~tal~G~~~~~a~------------ 52 (131)
-+|..|+..+.+++.++... +. + .|+++.+ | |.. |+ .+.-.|..|+.++
T Consensus 64 tEEl~HlEmva~~I~~L~~ga~~~-~~~a~~~p~~~~~~~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~ 142 (266)
T 1o9i_A 64 TEEMAHVEMISTMIGYLLEDAPFG-PEDLKRDPSLATTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMR 142 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCS-HHHHHHCTTHHHHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHH
T ss_pred HHhccHHHHHHHHHHHHcCCCCcc-hhhcccchhhHhhhcCCChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHH
Confidence 47889999999999999543 22 2 3444211 1 222 11 1223444444444
Q ss_pred -HHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHh
Q psy6686 53 -TVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 53 -t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~ 98 (131)
-.+-|..--.+|..+++.. +|+.++++|..++.||..|...
T Consensus 143 ~niaaE~~Ar~~Y~rl~~~t-----dDp~vkd~L~fLi~RE~~H~~~ 184 (266)
T 1o9i_A 143 FNVVRESEARLQVSRLYSMT-----EDEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-----CChhHHHHHHHHHHHHHHHHHH
Confidence 4677888889999999765 3688899999999999999764
No 35
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=92.43 E-value=0.9 Score=33.52 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHH-H-Hhh-hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhc
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLG-A-GSA-LLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAAN 78 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LG-a-~ta-l~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~ 78 (131)
.++|.+|...+-+||..+|.+|..-.--+.-.+ .++ - ..+ ....+-.+..+.+-|..|.+.|++-+..-. .. |
T Consensus 67 ~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s-~I~~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~~i~~A~--e~-D 142 (188)
T 2clb_A 67 RLEDRLHFELMTQRIYELGGGLPRDIRQLADIS-ACSDAYLPENWKDPKEILKVLLEAEQCAIRTWKEVCDMTY--GK-D 142 (188)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHC-SSCCCCCCTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHT--TT-C
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhc-cCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc-C
Confidence 368999999999999999999986432221110 011 0 011 123344566777778888888888775442 23 6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhHh
Q psy6686 79 RELMDVIHKFRDEEQEHHDTGLE 101 (131)
Q Consensus 79 ~~l~~~i~~~r~dE~~H~d~A~~ 101 (131)
....+.|..|-.|+.+|...-..
T Consensus 143 ~~T~dlL~~~l~e~ee~~~~l~~ 165 (188)
T 2clb_A 143 PRTYDLAQRILQEEIEHEAWFLE 165 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777799999998888776644
No 36
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=92.29 E-value=0.57 Score=34.34 Aligned_cols=95 Identities=8% Similarity=0.046 Sum_probs=64.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHH-HhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGA-GSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa-~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|.+|...+-+||..+|..|..-.--+.-.+ .+.- -.+....+-.+.+..+-|+.+.+.|++-+..-.+. +|..
T Consensus 71 ~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s-~i~e~~~~~~~~~e~l~~~l~~e~~~i~~~r~~i~~a~e~--~D~~ 147 (182)
T 1tjo_A 71 AETAEEVADELAERVQALGGVPHASPETLQAEA-SVDVEDEDVYDIRTSLANDMAIYGDIIEATREHTELAENL--GDHA 147 (182)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC-CSCCCCSSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHC--CCHH
Confidence 367899999999999999999987332211100 0000 01122345567788888999999999977644332 4666
Q ss_pred HHHHHHHHHHHHHhHHHhh
Q psy6686 81 LMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~A 99 (131)
.++.+..+-.++.+|...=
T Consensus 148 T~dll~~~l~~~Ek~~w~L 166 (182)
T 1tjo_A 148 TAHMLREGLIELEDDAHHI 166 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 7777999999999997643
No 37
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=91.91 E-value=1.1 Score=32.94 Aligned_cols=86 Identities=16% Similarity=0.156 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hh-hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SA-LLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-ta-l~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
++|.+|-..|-+++..+|.+|.+-. + ... .. .-...-++-+.-+.|..|.+.|++=++.-.. .+|..
T Consensus 61 ~EE~~HA~kl~~~i~~rgg~~~l~~-i--------~~p~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~~a~~--~~D~~ 129 (183)
T 2cih_A 61 HEEREHAEKLMKLQNQRGGRIFLQD-I--------QKPDCDDWESGLNAMECALHLEKNVNQSLLELHKLATD--KNDPH 129 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCCC-C--------CCCSCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH
T ss_pred HHHHHHHHHHHHHHHHCCCccccCC-C--------CCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHH
Confidence 6899999999999999999998632 1 000 00 1123457888899999999999887754432 25788
Q ss_pred HHHHHH-HHHHHHHhHHHhh
Q psy6686 81 LMDVIH-KFRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~-~~r~dE~~H~d~A 99 (131)
+.+.|+ .|-+|+.+|-+..
T Consensus 130 t~~fLe~~fl~eq~e~~~~l 149 (183)
T 2cih_A 130 LCDFIETHYLNEQVKAIKEL 149 (183)
T ss_dssp HHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 888899 7999999987664
No 38
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=91.71 E-value=1.2 Score=32.58 Aligned_cols=82 Identities=13% Similarity=0.167 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-++|.++|.+|.+-. + .... ..-...-++-+.-+.|..|.+-|++=++.-.. ++|..+
T Consensus 62 ~EE~~HA~~l~e~i~~lGG~p~l~~-i--------~~p~~~~~~~~e~le~aL~~E~~~~~~~~~l~~~A~~--~~D~~t 130 (181)
T 3bvf_A 62 AEEYEHAKKLIIFLNENNVPVQLTS-I--------SAPEHKFEGLTQIFQKAYEHEQHISESINNIVDHAIK--SKDHAT 130 (181)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCC-B--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCC-C--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHhH
Confidence 6899999999999999999996532 1 0000 11123567888888999999999887754432 257888
Q ss_pred HHHHHHHHHHHHhH
Q psy6686 82 MDVIHKFRDEEQEH 95 (131)
Q Consensus 82 ~~~i~~~r~dE~~H 95 (131)
.+.++.|-+|+.++
T Consensus 131 ~~~l~~~l~eqvEe 144 (181)
T 3bvf_A 131 FNFLQWYVAEQHEE 144 (181)
T ss_dssp HHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88899999884443
No 39
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=91.42 E-value=1.1 Score=32.62 Aligned_cols=82 Identities=15% Similarity=0.227 Sum_probs=61.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccch---h----HHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALL---P----FWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDP 75 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~---P----lW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~ 75 (131)
++|.+|-..+-+++..+|.+|.+-. | -| -...-+|-+.-+.|..|.+.|++=.+.-. .
T Consensus 47 ~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~-------------~~~~e~le~aL~~Ek~v~~~l~~l~~la~--~ 111 (168)
T 3e6s_A 47 AEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEW-------------SSPEDVWQSILELEQANTRSLLNLAEAAS--T 111 (168)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTC-------------CSHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHcCCccccCCcCCCCccccC-------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 5899999999999999999997521 1 12 12234678888889999888887664332 2
Q ss_pred hhcHHHHHHHHHHHHHHHhHHHhh
Q psy6686 76 AANRELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 76 ~~~~~l~~~i~~~r~dE~~H~d~A 99 (131)
.+|..+.+.|+.|-+|+.+|-+..
T Consensus 112 ~~D~~t~~fLe~fl~eQve~~~~l 135 (168)
T 3e6s_A 112 CHDFAVMAFLNPFHLQQVNEEDKI 135 (168)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHH
Confidence 257888888999999999997765
No 40
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=91.20 E-value=1.5 Score=31.67 Aligned_cols=84 Identities=20% Similarity=0.219 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+- ++ .... ..-...-.+-+..+-|+.|.+.|++-++.-.+ .+|...
T Consensus 62 ~EE~~HAd~l~eri~~lGg~~~l~-~i--------~~p~~~~~~~~e~le~~l~~E~~v~~~~~~l~~~A~~--~~D~~t 130 (176)
T 1vlg_A 62 QEELTHAMKFYEYIYERGGRVELE-AI--------EKPPSNWNGIKDAFEAALKHEEFVTQSIYNILELASE--EKDHAT 130 (176)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCC-CB--------CCCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCeecC-CC--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHhH
Confidence 689999999999999999999632 11 0000 11123457788888899999999986643322 257777
Q ss_pred HHHHHHHHHHHHhHHH
Q psy6686 82 MDVIHKFRDEEQEHHD 97 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d 97 (131)
.+.|+.|-+|+.++..
T Consensus 131 ~~~l~~~l~eq~ee~~ 146 (176)
T 1vlg_A 131 VSFLKWFVDEQVEEED 146 (176)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7889999888655544
No 41
>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A
Probab=90.46 E-value=1 Score=34.09 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=62.7
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhh-hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSA-LLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~ta-l~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..|-+++..+|.+|.+- ++=.. -.|.-+- .-...-+|-+.-+.|..|.+.|++=++.-.. .+|..+
T Consensus 89 ~EE~~HA~kl~~yi~~rGG~~~l~-~i~~p---~~~~~~~e~~~~~e~le~aL~~Ek~v~~~l~~l~~~A~~--~~D~~t 162 (212)
T 3a68_A 89 EEEREHAEKLMEYQNKRGGKVKLQ-SIVMP---LSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATK--NGDVQL 162 (212)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCC-CBCCC---CCCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCccC-CcCCC---CCCcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCHHH
Confidence 689999999999999999999862 21000 0000000 0011457788889999999998877654322 257888
Q ss_pred HHHHH-HHHHHHHhHHHhh
Q psy6686 82 MDVIH-KFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~-~~r~dE~~H~d~A 99 (131)
.+.|+ .|-+|+.+|-+..
T Consensus 163 ~~fLe~~fL~EQve~~~~l 181 (212)
T 3a68_A 163 ADFVETEYLGEQVEAIKRI 181 (212)
T ss_dssp HHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 88899 9999999997654
No 42
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=90.38 E-value=1.2 Score=31.96 Aligned_cols=95 Identities=5% Similarity=-0.031 Sum_probs=64.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|..|...+.+||..+|..|..-.--+.-.+-.--...+....+-.+.+..+.|..+...|++-+..-.+. +|...
T Consensus 59 ~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~--~D~~T 136 (162)
T 1o9r_A 59 RTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPTDIYKIHDHLDALIERYGEVANMIRKAIDDSDEA--GDPTT 136 (162)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCHHH
Confidence 3578899999999999999999874322211110000011122445677888888999999999988654332 36666
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
++.+..+-.++.+|..-
T Consensus 137 ~dll~~il~~~Ek~~w~ 153 (162)
T 1o9r_A 137 ADIFTAASRDLDKSLWF 153 (162)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77799999998888654
No 43
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=90.35 E-value=1.2 Score=32.67 Aligned_cols=88 Identities=15% Similarity=0.160 Sum_probs=62.0
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRELM 82 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~ 82 (131)
++|.+|-..|-+++..+|.+|.+- ++=.. -....-...-+|-+.-+.|..|.+.|++=.+.-.. .+|..+.
T Consensus 57 ~EE~~HA~kl~~~i~~rgg~~~l~-~i~~p------~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~la~~--~~D~~t~ 127 (176)
T 3ka8_A 57 HEEREHAEKFMKYQNKRGGRVVLQ-DIKKP------ERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATD--KVDPHLC 127 (176)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCC-CCCCC------SCSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCeeeC-cccCC------CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCChhHH
Confidence 589999999999999999999862 21000 00001122457788888899999888876643322 2578888
Q ss_pred HHHHH-HHHHHHhHHHhh
Q psy6686 83 DVIHK-FRDEEQEHHDTG 99 (131)
Q Consensus 83 ~~i~~-~r~dE~~H~d~A 99 (131)
+.|+. |-+|+.+|-+..
T Consensus 128 ~fLe~~fl~eQve~~~~l 145 (176)
T 3ka8_A 128 DFLESEYLEEQVKHIKRI 145 (176)
T ss_dssp HHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 88995 999999997765
No 44
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=89.13 E-value=1.1 Score=31.83 Aligned_cols=94 Identities=11% Similarity=0.067 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHH-hhhc-CchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAG-SALL-GPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~-tal~-G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...+.+||..+|..|..-.-=+.-.+ .++-. .+.. ..+-.+.+....|..+...|++-+..-.+ .+|.
T Consensus 50 ~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s-~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~--~~D~ 126 (156)
T 2bk6_A 50 YSEFGEQMDEVAERLLAIGGSPFSTLKEFLENA-SVEEAPYTKPKTMDQLMEDLVGTLELLRDEYKQGIELTDK--EGDD 126 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC-CSCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhH--CCCH
Confidence 467889999999999999999987321111110 01111 1111 34456788888899999999998865432 2456
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
..++.+..+-.++.+|..-
T Consensus 127 ~T~dll~~il~~~Ek~~w~ 145 (156)
T 2bk6_A 127 VTNDMLIAFKASIDKHIWM 145 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6677799999999888754
No 45
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=88.66 E-value=1.7 Score=31.95 Aligned_cols=93 Identities=9% Similarity=-0.004 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccch-hHHHHHHHHHHH-HhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALL-PFWNVAGFVLGA-GSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~-PlW~~~gf~LGa-~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...+-+||..+|..|..-. .+-.... +.- -.+....+-.+.+....|..+...|++-+..-.+ . |.
T Consensus 58 ~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~--i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~--~-D~ 132 (183)
T 2yw6_A 58 VELVRGYADEVAERIATLGKSPKGTPGAIIKDRT--WDDYSVERDTVQAHLAALDLVYNGVIEDTRKSIEKLED--L-DL 132 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC--SCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHTT--T-CH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC--CCccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--c-CH
Confidence 46788999999999999999998742 2211100 000 0111224456778888899999999998865533 2 67
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
..++.+..+-.|+.+|...=
T Consensus 133 ~T~dll~~il~~~Ek~~w~L 152 (183)
T 2yw6_A 133 VSQDLLIAHAGELEKFQWFV 152 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77777999999999987653
No 46
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=88.66 E-value=2.2 Score=30.48 Aligned_cols=91 Identities=7% Similarity=-0.049 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|..|...+.+|+..+|..|..-.-=+.-.+ +.-.+ +....+-.+.+..+.|..+...|++-+ .-.+ .+|..
T Consensus 62 ~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s--i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i-~a~~--~~D~~ 136 (161)
T 2yjk_A 62 VAHAQDYADTAAERIVALGLPIDSRVSTMAEKT--STAVPAGFAQWQDEIKAIVSDIDAALVDLQAAI-DGLD--EVDLT 136 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTC--CCCSCSSCEEHHHHHHHHHHHHHHHHHHHHHHH-HHHT--TTCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhc--cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-Hhcc--cCCHH
Confidence 467889999999999999999987432221111 21111 112334567888888999999999988 5433 24666
Q ss_pred HHHHHHHHHHHHHhHHH
Q psy6686 81 LMDVIHKFRDEEQEHHD 97 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d 97 (131)
.++.+..+-.|+.+|..
T Consensus 137 T~dll~~il~~~Ek~~w 153 (161)
T 2yjk_A 137 SQDVAIEIKRGVDKDRW 153 (161)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77779999999888864
No 47
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=88.49 E-value=1.3 Score=31.51 Aligned_cols=93 Identities=5% Similarity=-0.059 Sum_probs=62.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHH-HhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGA-GSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa-~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|..|...+-+||..+|..|..-.-=+.-.+- +.- -.+..-.+-.+.+....|+.+...|++-+..-.+. +|..
T Consensus 55 ~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~-i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~--~D~~ 131 (156)
T 2fjc_A 55 YVSVTEAFDTIAERLLQLGAQAPASMAEYLALSG-IAEETEKEITIVSALARVKRDFEYLSTRFSQTQVLAAES--GDAV 131 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCC-SCCCCCCSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCHH
Confidence 4678899999999999999999873211111000 000 01111234567888888999999999988654332 4666
Q ss_pred HHHHHHHHHHHHHhHHH
Q psy6686 81 LMDVIHKFRDEEQEHHD 97 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d 97 (131)
.++.+..+-.|+.+|..
T Consensus 132 T~dll~~il~~~Ek~~w 148 (156)
T 2fjc_A 132 TDGIITDILRTLGKAIW 148 (156)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67779999999988864
No 48
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=88.49 E-value=1.5 Score=33.41 Aligned_cols=93 Identities=3% Similarity=-0.015 Sum_probs=64.3
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccch-hHHHHHHHHHHH-HhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALL-PFWNVAGFVLGA-GSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~-PlW~~~gf~LGa-~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...+-+||..+|..|..-. .+-.... +.- -.+..-.+-.+.+..+.|+.+...|.+-+..-.+ . |.
T Consensus 89 ~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~--i~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~aee--~-D~ 163 (211)
T 2c2j_A 89 YEGISKFADDVAERQLSVGASSDGRAITIVAASR--LPEIPGGFLDDAQVIQFFTYQYETVGQRIHQRVGDVEK--V-DP 163 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCC--SCCCCCSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHTT--T-CH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCC--CcccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--c-CH
Confidence 46788999999999999999998732 1111100 000 0011123456788888899999999998865533 2 67
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
..++.+..+-.||.+|...=
T Consensus 164 ~T~dLl~~il~~~EkhiW~L 183 (211)
T 2c2j_A 164 TTANLLQEVEHIIEKYQWQM 183 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77777999999999997654
No 49
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=88.43 E-value=1.7 Score=30.83 Aligned_cols=92 Identities=11% Similarity=0.079 Sum_probs=62.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccch-hHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALL-PFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~-PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|..|...+.+|+..+|..|..-. .+-... .++-...--..+-.+.+..+.|..+...|++-+..-.+. +|..
T Consensus 54 ~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s--~i~e~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~--~D~~ 129 (153)
T 2chp_A 54 YDHAAETVDTIAERLLAIGGQPVATVKEYTEHA--SITDGGNETSASEMVQALVNDYKQISSESKFVIGLAEEN--QDNA 129 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC--SSCSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCHH
Confidence 46788999999999999999998732 111111 011111111344567888888999999999988654331 3566
Q ss_pred HHHHHHHHHHHHHhHHH
Q psy6686 81 LMDVIHKFRDEEQEHHD 97 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d 97 (131)
.++.+..+-.|+.+|..
T Consensus 130 T~dll~~il~~~Ek~~w 146 (153)
T 2chp_A 130 TADLFVGLIEEVEKQVW 146 (153)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66679999999888864
No 50
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=88.37 E-value=1.3 Score=32.28 Aligned_cols=94 Identities=14% Similarity=0.050 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHH-Hhhhc-CchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGA-GSALL-GPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa-~tal~-G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...+.+||..+|..|..-.-=+.-.+ .+.- -.+.. ..+-.+.+....|..+...|++-+..-.+ ..|.
T Consensus 69 ~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s-~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~ae~--~~D~ 145 (175)
T 2wlu_A 69 LDSLNANLDEVSERLITIGGAPYSTLAEFSKHS-KLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDITDE--EGDA 145 (175)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC-SCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCH
Confidence 467889999999999999999987321111100 0000 01111 33456788888899999999998865432 2456
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
..++.+..+-.|+.+|..-
T Consensus 146 ~T~dll~~il~~~Ek~~w~ 164 (175)
T 2wlu_A 146 GTNDLFTAAKTEAEKTIWM 164 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6677799999999998764
No 51
>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}
Probab=88.34 E-value=2.6 Score=31.68 Aligned_cols=91 Identities=13% Similarity=0.114 Sum_probs=60.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhh-cCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSAL-LGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal-~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
++|.+|-..+-+++..+|.+|.+- ++=..- .|..+-- -...-+|-+.-+.|..|.+.|++=.+ +.. ..+|..+
T Consensus 84 ~EE~~HA~kLi~yi~~rGG~~~l~-~i~~p~---~~~~~~~~~~~~e~le~aL~~Ek~v~~~l~~l~~-lA~-~~~D~~t 157 (204)
T 3vnx_A 84 DEEREHAHMLMDYQTKRGGRVELK-PLAAPE---MEFANDDKGEALYAMELALSLEKLNFQKLQALQA-IAD-KHKDAAL 157 (204)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCC-CCCCCC---CCCCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HTTCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccC-CCCCCC---ccccccccccHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HCCChHH
Confidence 589999999999999999999862 110000 0000000 00134677888888988888887654 322 2257888
Q ss_pred HHHHH-HHHHHHHhHHHhh
Q psy6686 82 MDVIH-KFRDEEQEHHDTG 99 (131)
Q Consensus 82 ~~~i~-~~r~dE~~H~d~A 99 (131)
.+.|+ .|-+|+.+|-+..
T Consensus 158 ~~fLe~~fL~EQve~i~~l 176 (204)
T 3vnx_A 158 CDFVEGGLLSEQVDAVKEH 176 (204)
T ss_dssp HHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 88899 7999999997664
No 52
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=87.63 E-value=0.65 Score=31.70 Aligned_cols=35 Identities=40% Similarity=0.597 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhhH
Q psy6686 61 VDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTGL 100 (131)
Q Consensus 61 ~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A~ 100 (131)
-.=|++++... .+++++++|..+|+||.+|.-.-+
T Consensus 34 I~~Y~q~a~~~-----~d~~~k~vl~~i~~EEkeH~g~~l 68 (95)
T 3k6c_A 34 VDLYNQRVNAC-----KDKELKAILAHNRDEEKEHAAMLL 68 (95)
T ss_dssp HHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777654 368899999999999999965543
No 53
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=87.47 E-value=2.3 Score=31.65 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccch---hHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALL---PFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~---PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
++|.+|-..|-+++..+|.+|.+-. |-- .-.-...-+|-|.-+.|..|.+.+++=.+ +.. ..+|.
T Consensus 57 ~EE~~HA~kl~~yi~~rgG~~~l~~i~~p~~----------~~~~s~~e~le~aL~~Ek~v~~~l~~l~~-la~-~~~D~ 124 (191)
T 3kxu_A 57 EEKREGYERLLKMQNQRGGRALFQDIKKPAE----------DEWGKTPDAMKAAMALEKKLNQALLDLHA-LGS-ARTDP 124 (191)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCCCCCCCSC----------SCCCSHHHHHHHHHHHHHHHHHHHHHHHH-HHH-HTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCcCCCCc----------cccCCHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hcCCH
Confidence 5899999999999999999998621 210 00112245778888889999888887553 322 22578
Q ss_pred HHHHHHH-HHHHHHHhHHHhh
Q psy6686 80 ELMDVIH-KFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~-~~r~dE~~H~d~A 99 (131)
.+.+.|+ .|-+|+.+|-+..
T Consensus 125 ~t~~fLe~~fL~EQve~i~~l 145 (191)
T 3kxu_A 125 HLCDFLETHFLDEEVKLIKKM 145 (191)
T ss_dssp HHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 8888899 5999999987765
No 54
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=87.41 E-value=1.6 Score=32.86 Aligned_cols=94 Identities=14% Similarity=0.044 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHH-Hhhhc-CchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGA-GSALL-GPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa-~tal~-G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|.+|...+.+||..+|..|..-.--+.-.+- +.- -.+.. ..+-.+.+..+.|..+...|++-+..-.+ ..|.
T Consensus 85 ~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~-i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re~i~~aee--~~D~ 161 (199)
T 2xgw_A 85 LDSLNANLDEVSERLITIGGAPYSTLAEFSKHSK-LDEAKGTYDKTVAQHLARLVEVYLYLSSLYQVGLDITDE--EGDA 161 (199)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS-CCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC-CCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCH
Confidence 4678899999999999999999873211111000 000 01111 33456788888899999999998865432 2456
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
..++.+..+-.||.+|..-
T Consensus 162 ~T~dll~~il~~~Ekh~w~ 180 (199)
T 2xgw_A 162 GTNDLFTAAKTEAEKTIWM 180 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6677799999999998754
No 55
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=87.00 E-value=1.9 Score=31.15 Aligned_cols=94 Identities=11% Similarity=0.052 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhh-h-cCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSA-L-LGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~ta-l-~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
.++|..|...+-+||..+|..|..-.-=+.-.+ .+.-..+ . .-.+-.+.+....|..+...|++-+..-.+ ..|.
T Consensus 59 ~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s-~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~--~~D~ 135 (165)
T 2cf7_A 59 MEEIDGYLAEMSERLITLGGAPFSTLKEFSENS-QLKEVLGDYNVTIEEQLARVVEVFRYLAALFQKGFDVSDE--EGDS 135 (165)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHC-SCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCH
Confidence 467889999999999999999987321111100 0000011 1 122467788888899999999998865532 2356
Q ss_pred HHHHHHHHHHHHHHhHHHh
Q psy6686 80 ELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~ 98 (131)
..++.+..+-.|+.+|..-
T Consensus 136 ~T~dll~~il~~~Ek~~w~ 154 (165)
T 2cf7_A 136 VTNDIFNVAKASIEKHIWM 154 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6666799999998888754
No 56
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=86.29 E-value=1.7 Score=31.18 Aligned_cols=93 Identities=13% Similarity=0.052 Sum_probs=63.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhh-hcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSA-LLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~ta-l~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|..|...+-+||..+|..|..-.--+.-.+ .++-.++ ....+-.+.+..+.|..+...|++-+..-.+ . |..
T Consensus 60 ~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s-~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~--~-D~~ 135 (161)
T 2z90_A 60 VDFAREGSDTIAERMRALDAVPDGRSDTVAATT-TLPEFPAFERSTADVVDLITTRINATVDTIRRVHDAVDA--E-DPS 135 (161)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHC-CSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-CHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC--C-CHH
Confidence 467889999999999999999987321111100 0111111 1234467788888899999999998865432 2 667
Q ss_pred HHHHHHHHHHHHHhHHHh
Q psy6686 81 LMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~ 98 (131)
.++.+..+-.|+.+|..-
T Consensus 136 T~dll~~il~~~Ek~~w~ 153 (161)
T 2z90_A 136 TADLLHGLIDGLEKQAWL 153 (161)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777799999999888653
No 57
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=86.24 E-value=1.7 Score=32.84 Aligned_cols=94 Identities=10% Similarity=-0.045 Sum_probs=63.6
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|..|...+-+||..+|..|..-.-=+.-.+. +.-.. +..-.+-.+.+....|..+...|++-+..-.+. .|..
T Consensus 102 ~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~-I~e~~~g~~~~~emL~~ll~~e~~~i~~~re~i~~aee~--~D~~ 178 (207)
T 2c2u_A 102 IAEIFPSIDEQAERLVALGGSPLAAPADLARYST-VQVPQETVRDARTQVADLVQDLSRVGKGYRDDSQACDEA--NDPV 178 (207)
T ss_dssp HHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCS-SCCCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCC-CCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHH
Confidence 4577899999999999999999873211111000 10001 112345677888889999999999988654332 3566
Q ss_pred HHHHHHHHHHHHHhHHHh
Q psy6686 81 LMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~ 98 (131)
.++.+..+-.||.+|..-
T Consensus 179 T~dLl~~il~~~EkhiW~ 196 (207)
T 2c2u_A 179 TADMYNGYAATIDKIRWM 196 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677799999999988654
No 58
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=85.63 E-value=2.9 Score=30.14 Aligned_cols=90 Identities=7% Similarity=-0.008 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHh-hhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGS-ALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~t-al~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.++|.+|...+-+||..+|..|..-.-=+.-.+ .++-.+ +....+-.+.+....|+.+...|++-+..- + |..
T Consensus 70 ~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s-~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a-~----D~~ 143 (167)
T 3ak8_A 70 RTALTDHLDTMAERAVQLGGVALGTTQVINSKT-PLKSYPLDIHNVQDHLKELADRYAVVANDVRKAIGEA-K----DED 143 (167)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHC-CSCCCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHC-C----SHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh-C----CHH
Confidence 467889999999999999999987321111100 111101 112344567888888999999999988544 3 455
Q ss_pred HHHHHHHHHHHHHhHHH
Q psy6686 81 LMDVIHKFRDEEQEHHD 97 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d 97 (131)
.++.+..+-.|+.+|..
T Consensus 144 T~dll~~il~~~Ek~~w 160 (167)
T 3ak8_A 144 TADIFTAASRDLDKFLW 160 (167)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56669999999888865
No 59
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=85.29 E-value=4 Score=28.79 Aligned_cols=95 Identities=3% Similarity=-0.053 Sum_probs=63.5
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.+++.+|...+.+|+..+|..|-.-.--+.-.+-.=-.-.+....+-.+.+...-+..+...|.+-+..-.+. +|...
T Consensus 47 ~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~~--~D~~T 124 (152)
T 3kwo_A 47 YEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKE--SDTTT 124 (152)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 4678999999999999999988753221111000000011123456677888888999999999998655432 35666
Q ss_pred HHHHHHHHHHHHhHHHh
Q psy6686 82 MDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d~ 98 (131)
++.+..+-.++.+|..-
T Consensus 125 ~dll~~~l~~~Ek~~w~ 141 (152)
T 3kwo_A 125 AAFAQENIAKYEKSLWM 141 (152)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66699999998888654
No 60
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=83.66 E-value=4.5 Score=29.12 Aligned_cols=94 Identities=9% Similarity=-0.033 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++|.+|...+.+||..+|..|-.-.--+.-.+..=-.-.+....+-.+.+....++.+.+.|++-+..-.+. +|...
T Consensus 64 ~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~aee~--~D~~T 141 (164)
T 4eve_A 64 YEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKE--GDKVT 141 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHHH
Confidence 4688999999999999999988763222111100000011222455677888888999999999998655432 35666
Q ss_pred HHHHHHHHHHHHhHHH
Q psy6686 82 MDVIHKFRDEEQEHHD 97 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d 97 (131)
++.+..+-.++.+|..
T Consensus 142 ~dll~~il~~~Ek~~W 157 (164)
T 4eve_A 142 VTYADDQLAKLQKSIW 157 (164)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6669999988888753
No 61
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=82.66 E-value=5.2 Score=28.39 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=62.7
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.+++.+|...+.+|+..+|..|-.-.--+.-.+. +--..+-...+-.+.+....+..+...|.+-+..-.+ .+|...
T Consensus 60 ~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~-i~e~~~~~~~~eml~~ll~~~~~~i~~~r~~i~~ae~--~~D~~T 136 (159)
T 3iq1_A 60 YTDLQLKIDELAERILTLSARPMHSFSGYLKAAQ-IKEHTDSIDGRSSMQGLVDGFSILLHQQRDILELAGE--TGDEGT 136 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCS-SCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCC-CCccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhH--cCCHHH
Confidence 4688999999999999999988763211111000 1000122345667788888899999999998865533 235666
Q ss_pred HHHHHHHHHHHHhHHH
Q psy6686 82 MDVIHKFRDEEQEHHD 97 (131)
Q Consensus 82 ~~~i~~~r~dE~~H~d 97 (131)
++.+..+-.++.+|..
T Consensus 137 ~dll~~~l~~~Ek~~W 152 (159)
T 3iq1_A 137 SALMSDYIREQEKLVW 152 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6669999999888854
No 62
>1jm0_A Protein (four-helix bundle model); alpha-helical bundle, protein design, de novo protein; 1.70A {Synthetic} SCOP: k.8.1.1 PDB: 1jmb_A 1ovu_A 1ovv_A 1lt1_A 1ec5_A 1nvo_A 1ovr_A 2kik_A 1u7j_A 1y47_A 1mft_A 1u7m_A
Probab=80.51 E-value=5.3 Score=23.63 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHh
Q psy6686 50 MACTVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 50 ~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~ 98 (131)
+.|=-+.|..+-..|++-|+. .++++ ++.+-.||.+|.|-
T Consensus 4 L~~DL~~E~~~i~~l~eai~~------vsr~l---le~iL~dEEeH~dw 43 (50)
T 1jm0_A 4 LRELLKLELQAIKQYREALEY------VKLPV---LAKILEDEEKHIEW 43 (50)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------HCCHH---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH------HHHHH---HHHHHHHHHHHHHH
Confidence 456668899999999999987 35566 99999999999874
No 63
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=79.97 E-value=8.4 Score=26.08 Aligned_cols=33 Identities=33% Similarity=0.533 Sum_probs=24.5
Q ss_pred HHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhh
Q psy6686 62 DHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 62 ~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A 99 (131)
.-|+++.. ... ++++++++..+++||.+|.-.-
T Consensus 35 ~~Y~q~A~-~t~----D~evk~vl~~iadEEkeH~g~~ 67 (95)
T 1zpy_A 35 DLYNQRVN-ACK----DKELKAILAHNRDEEKEHAAML 67 (95)
T ss_dssp HHHHHHHH-HCC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-hCC----CHHHHHHHHHHHHHHHHHHHHH
Confidence 45655554 433 6889999999999999996543
No 64
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=78.57 E-value=14 Score=29.89 Aligned_cols=95 Identities=11% Similarity=-0.011 Sum_probs=59.7
Q ss_pred hHHHHHHHHHHHHHH----hcCCCCccchhHHHHHHHHHHHHhhhcC---chh-HHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy6686 3 DQEKAHKAKFEELIR----KYRVRPTALLPFWNVAGFVLGAGSALLG---PKG-AMACTVAVESVIVDHYNEQLRALMSD 74 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~----~~~~RpS~L~PlW~~~gf~LGa~tal~G---~~~-~~a~t~avE~~V~~Hy~~ql~~L~~~ 74 (131)
-+|..|---|-+.+. .+|++|.+..|-+.++-....+++..-. +.. .++++-..|+. -+.|+..+ ..+
T Consensus 134 ~DE~~Hs~Mf~~~~~~~~~~~G~~~~~~~p~~~l~r~l~~~la~~~~~~~~~l~~~a~~lvaEei-id~~~r~~---~~D 209 (336)
T 3chh_A 134 VDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRVLADMPEQWERDIAVLVWGAVAETC-INALLALL---ARD 209 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHS-BCHHHHHH---HTC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHHccCchhhhhHHHHHHHHHHHHHH-HHHHHHHh---cCC
Confidence 378999988888888 5898867777877755434444443322 111 22332334444 44555554 333
Q ss_pred ChhcHHHHHHHHHHHHHHHhHHHhhHh
Q psy6686 75 PAANRELMDVIHKFRDEEQEHHDTGLE 101 (131)
Q Consensus 75 ~~~~~~l~~~i~~~r~dE~~H~d~A~~ 101 (131)
+.-.+-++.+.+-=..||..|...|.+
T Consensus 210 ~~vQP~vR~v~riHv~DEaRH~~fare 236 (336)
T 3chh_A 210 ATIQPMHSLITTLHLRDETAHGSIVVE 236 (336)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566677778888999999988866
No 65
>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=76.75 E-value=14 Score=27.77 Aligned_cols=80 Identities=11% Similarity=0.096 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhh----cC------chhHHHHHHHHHHHHHHHHHHHHHHhc
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSAL----LG------PKGAMACTVAVESVIVDHYNEQLRALM 72 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal----~G------~~~~~a~t~avE~~V~~Hy~~ql~~L~ 72 (131)
++|.+|-..|-+++..+|.+|.+-. +... .| ..-+|.+.-+.|..|.+-+++=++.-.
T Consensus 81 ~EE~~HA~kli~yi~~rGg~~~l~~------------i~~p~~~~~~~~~~~~~~e~le~aL~~Ek~vt~~l~~l~~~a~ 148 (212)
T 1z6o_A 81 DEAWSKTIDIIKHVTKRGDKMNFDQ------------HSTMKTERKNYTAENHELEALAKALDTQKELAERAFYIHREAT 148 (212)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCTTC------------CCCSCCCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCccccc------------cccccccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999998521 1111 23 366788888999999999988554332
Q ss_pred CC--ChhcHHHHHHHH-HHHHHHHh
Q psy6686 73 SD--PAANRELMDVIH-KFRDEEQE 94 (131)
Q Consensus 73 ~~--~~~~~~l~~~i~-~~r~dE~~ 94 (131)
.. ...|..+++.|+ .|-++..+
T Consensus 149 ~~~~~~~D~~t~~fLe~~fleeQve 173 (212)
T 1z6o_A 149 RNSQHLHDPEIAQYLEEEFIEDHAE 173 (212)
T ss_dssp TSCTTCCCHHHHHHHHHHTHHHHHH
T ss_pred HhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 21 112777877787 66544433
No 66
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=75.68 E-value=16 Score=27.27 Aligned_cols=84 Identities=14% Similarity=0.036 Sum_probs=54.1
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcC-chhHHHHHHHHH-HHHHHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLG-PKGAMACTVAVE-SVIVDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G-~~~~~a~t~avE-~~V~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.+|..|-..|-++|..++..|++ +.--+ +.+| ..-.+-...+-| ..+.+-|.+=++.-. .+++.+
T Consensus 71 ~~E~~HA~~~~~~l~~l~~~~~i--~~~p~---------~~~gst~enL~~a~~gE~~E~t~my~~~a~~A~--eEgd~~ 137 (202)
T 1yuz_A 71 AAELIHIGLEYALVAEMEPGYEK--PTVAA---------PSAYSCDLNLISGANGEIYETSDMYPAFIRKAQ--EEGNSK 137 (202)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCC--CCC-----------CCCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCHH
T ss_pred HHHHHHHHHHHHHHHhcCCCcee--ccCCc---------cCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH--HCCCHH
Confidence 57999999999999999989886 22211 1122 222333333444 444444555444332 236788
Q ss_pred HHHHHHHHHHHHHhHHHhh
Q psy6686 81 LMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~A 99 (131)
+...++.+-.+|.+|.+.-
T Consensus 138 ~a~~f~~i~~~E~~H~~~~ 156 (202)
T 1yuz_A 138 AVHVFTRAKLAESVHAERY 156 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8888999999999998764
No 67
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=74.27 E-value=22 Score=26.02 Aligned_cols=87 Identities=17% Similarity=0.220 Sum_probs=59.8
Q ss_pred hHHHHHHHHHHHHHHhcCCCC----ccchhHHHHHHHHHHHH--hhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC-CC
Q psy6686 3 DQEKAHKAKFEELIRKYRVRP----TALLPFWNVAGFVLGAG--SALLGPKGAMACTVAVESVIVDHYNEQLRALMS-DP 75 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~Rp----S~L~PlW~~~gf~LGa~--tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~-~~ 75 (131)
++|.+|-..+-+++..+|.+| .+-. +... .-.-...-+|.+.-+.|..|.+-|++=++.-.. .|
T Consensus 65 ~EE~~HA~kli~yi~~rGg~~~~~~~l~~---------i~~p~~~~~~~~~e~le~aL~~Ek~v~~~i~~l~~~a~~~~D 135 (191)
T 1z6o_M 65 SEEREHAMKLIEYLLMRGELTNDVSSLLQ---------VRPPTRSSWKGGVEALEHALSMESDVTKSIRNVIKACEDDSE 135 (191)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCCGGGCC---------CCCCSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCcchhhhhhc---------CCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999 4321 0000 011134467888999999999998887654432 24
Q ss_pred hhcHHHHHHHHH-HHHHHHhHHHh
Q psy6686 76 AANRELMDVIHK-FRDEEQEHHDT 98 (131)
Q Consensus 76 ~~~~~l~~~i~~-~r~dE~~H~d~ 98 (131)
..++.+.+.|+. |-++..+.-..
T Consensus 136 ~~d~~~~d~Le~~fl~EQve~~~~ 159 (191)
T 1z6o_M 136 FNDYHLVDYLTGDFLEEQYKGQRD 159 (191)
T ss_dssp CCCHHHHHHHHHTHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 467888777776 77666655443
No 68
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=72.94 E-value=14 Score=25.93 Aligned_cols=51 Identities=18% Similarity=0.191 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhhHh
Q psy6686 49 AMACTVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTGLE 101 (131)
Q Consensus 49 ~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A~~ 101 (131)
++..-...|..-...|...-+.+... +++.++.++.++.+||.+|.+.=.+
T Consensus 9 ~L~~Ai~~E~~~~~~Y~~lA~~~~~~--~~~~~k~~f~~LA~eE~~H~~~l~~ 59 (167)
T 2oh3_A 9 FLAHAIALETEAAERYVELADMMEAH--NNLDTATVFRDMARFSTLHGDEIKQ 59 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555667777788888887743221 4678888999999999999998544
No 69
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=60.80 E-value=3.2 Score=29.14 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHh
Q psy6686 61 VDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 61 ~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~ 98 (131)
.-.+-+||..+.++ .+.+.+|..+|+||..|...
T Consensus 47 AI~~Y~qLA~~AP~----ee~k~iI~eIr~DE~rH~~~ 80 (115)
T 2hz8_A 47 AVKVYKEAAEKARN----PEKRQVIDKILEDEEKHIEW 80 (115)
T ss_dssp HHHHHHHHHHSCCC----TTTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCC----HHHHHHHHHHHHHHHHHHHH
Confidence 34555677677663 33455599999999999764
No 70
>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}
Probab=59.80 E-value=1.1 Score=31.75 Aligned_cols=93 Identities=9% Similarity=0.003 Sum_probs=61.4
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccch-hHHHHHHHHHHH-Hhhhc-CchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhc
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALL-PFWNVAGFVLGA-GSALL-GPKGAMACTVAVESVIVDHYNEQLRALMSDPAAN 78 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~-PlW~~~gf~LGa-~tal~-G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~ 78 (131)
.++|..|...+.+||..+|..|..-. .+-.... ++- -.+.. ..+-.+.+..+.|+.+...|++-+..-.+ .+|
T Consensus 47 ~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~--l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~~--~~D 122 (151)
T 2pyb_A 47 YEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSF--IKELDIESTSNFLPSMESIVCSLTEILKNIFGMRKLIDT--AGD 122 (151)
T ss_dssp HTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCS--SCCCCSCSSSCCCSSCCTTSTTHHHHHHHHHHHHHHHHH--HTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCC
Confidence 35677999999999999999998731 1111000 000 01111 23345677888899999999998865432 235
Q ss_pred HHHHHHHHHHHHHHHhHHHh
Q psy6686 79 RELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 79 ~~l~~~i~~~r~dE~~H~d~ 98 (131)
...++.+..+-.++.+|..-
T Consensus 123 ~~T~dll~~il~~~Ek~~w~ 142 (151)
T 2pyb_A 123 YGTANIMDDIMSDLEKHLWM 142 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66667799999998888653
No 71
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=56.48 E-value=22 Score=25.00 Aligned_cols=53 Identities=13% Similarity=0.179 Sum_probs=40.0
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhhHh
Q psy6686 44 LGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTGLE 101 (131)
Q Consensus 44 ~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A~~ 101 (131)
++-.-.+.....-|..-...|...-+.. +++.++.++.++.++|.+|.+.-..
T Consensus 19 ~~~~e~L~~A~~~E~~a~~~Y~~~A~~~-----~~~~~~~~f~~lA~~E~~H~~~l~~ 71 (175)
T 2fzf_A 19 FSLEELLGMAIKAEIGAREFYKSLAEKI-----KIEALKEKINWLAEEEKKHEALLRK 71 (175)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHSC-----CCTTHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556667777888888898888655 2356788899999999999988533
No 72
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=55.57 E-value=21 Score=24.92 Aligned_cols=44 Identities=18% Similarity=0.222 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhh
Q psy6686 50 MACTVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 50 ~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A 99 (131)
+.+-...|..=..-|..... . +++.+++++.++.+||.+|.+.=
T Consensus 19 L~~Ai~~E~~~~~~Y~~lA~--~----~~~~~k~lF~~LA~eE~~H~~~l 62 (157)
T 1vjx_A 19 LTVAIRLEEEGERFYRELSE--H----FNGEIKKTFLELADQERIHAEIF 62 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHTT--S----CCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH--c----CCHHHHHHHHHHHHHHHHHHHHH
Confidence 34444556666677777665 2 35778888999999999999874
No 73
>4a25_A DPS, ferritin DPS family protein; metal binding protein, detoxification process; 2.00A {Kineococcus radiotolerans}
Probab=49.39 E-value=18 Score=26.02 Aligned_cols=90 Identities=17% Similarity=0.175 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCChhcHHH
Q psy6686 2 WDQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGPKGAMACTVAVESVIVDHYNEQLRALMSDPAANREL 81 (131)
Q Consensus 2 ~~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~~~~~a~t~avE~~V~~Hy~~ql~~L~~~~~~~~~l 81 (131)
.++..+|...+.+|+..+|..|-- +|=....+...-...+-...+..+....+..+.+.+.|.+-+.... ..|...
T Consensus 66 y~e~~~~~D~iAERI~~LGg~P~~-~~~~~~~~~~~~~~~~~~~~~~mv~~l~~~~~~~~~~~r~~~~~ae---~~D~~T 141 (169)
T 4a25_A 66 VEAARGFSDDVAERMRAVGGVPDA-RPQTVAASRIGDVGPDEIDTRACVEAIVALVRHTVDTIRRVHDPID---AEDPAS 141 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCC-CHHHHTTCCSCCCCSSCEEHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc-cHHHHHHhcCccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHH
Confidence 456789999999999999998843 3321111000000011111222334444444455555665554332 234455
Q ss_pred HHHHHHHHHHHHhH
Q psy6686 82 MDVIHKFRDEEQEH 95 (131)
Q Consensus 82 ~~~i~~~r~dE~~H 95 (131)
.+.|..+..+...|
T Consensus 142 ~dll~~~~~~~EK~ 155 (169)
T 4a25_A 142 ADLLHAITLELEKQ 155 (169)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55576666655544
No 74
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=46.04 E-value=74 Score=22.24 Aligned_cols=78 Identities=17% Similarity=0.296 Sum_probs=51.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchhHHHHHHHHHHHHhhhcCc-hhHHHHHHHHHHHH-HHHHHHHHHHhcCCChhcHH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLPFWNVAGFVLGAGSALLGP-KGAMACTVAVESVI-VDHYNEQLRALMSDPAANRE 80 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~PlW~~~gf~LGa~tal~G~-~~~~a~t~avE~~V-~~Hy~~ql~~L~~~~~~~~~ 80 (131)
.+|..|-..|-++|...+ -|. .++ .+|+ .-.+-.-.+-|+.- .+-|..-.+.-.. +...+
T Consensus 55 ~~E~~HA~~~~~~L~~~~-~p~--------~~~-------~~~~T~enL~~A~~GE~~e~~~~Y~~~a~~A~~--eG~~~ 116 (144)
T 4di0_A 55 EGETGHAHGHLEYLEAVG-DPA--------TGL-------PFGTSRQNLQSAIAGETHEYTDMYPGMAKTARD--EGFEE 116 (144)
T ss_dssp HHHHHHHHHHHHHHTTTC-CTT--------TSC-------CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHH--HTCHH
T ss_pred HHHHHHHHHHHHHHhhcC-Ccc--------cCC-------CCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--CCcHH
Confidence 589999998888887765 342 111 1232 44555555556665 3567665544322 25788
Q ss_pred HHHHHHHHHHHHHhHHHh
Q psy6686 81 LMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 81 l~~~i~~~r~dE~~H~d~ 98 (131)
+...++.+-.+|.+|.+.
T Consensus 117 ia~~f~~~a~~E~~Ha~~ 134 (144)
T 4di0_A 117 IANWFETLAKAERSHANR 134 (144)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 889999999999999764
No 75
>2gyq_A YCFI, putative structural protein; structural genomics, APC6105, iron-binding, PSI, protein STR initiative; 1.40A {Rhodopseudomonas palustris} SCOP: a.25.1.4
Probab=45.61 E-value=84 Score=22.80 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhh----HhCCCCCChhH-HHHHHHHHHH
Q psy6686 53 TVAVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTG----LEHGAEQAPFY-KLMTDVIKVG 120 (131)
Q Consensus 53 t~avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A----~~~ga~~~p~~-~~~~~~ik~~ 120 (131)
+-+.|.++.+=|..+++.. .+++|++.|++.++|=..|.+.= -..|..+.... ..|..++.-+
T Consensus 24 iy~aE~q~~~aL~~~~~~a-----~~p~Lk~~l~~H~~eT~~qi~rLe~i~~~lg~~~~~~~c~am~gli~e~ 91 (173)
T 2gyq_A 24 IYYAEQQITKALPKMIEQA-----TNRDLSQGLTSHLEETQKQIERLDQVFKKLGQKPSGVNCPAIDGLIKEA 91 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHC-----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH
Confidence 4456777777777777666 46899999999999988887643 34676665555 6666665554
No 76
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=43.43 E-value=92 Score=22.63 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccc--hhHHHHHHHHHHHHhhhcCchhHHHHHHHHH-HHHHHHHHHHHHHhcCCChhcH
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTAL--LPFWNVAGFVLGAGSALLGPKGAMACTVAVE-SVIVDHYNEQLRALMSDPAANR 79 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L--~PlW~~~gf~LGa~tal~G~~~~~a~t~avE-~~V~~Hy~~ql~~L~~~~~~~~ 79 (131)
++|..|-..|-++|. |.+|.+- .|.-. .-...-.+--..+-| ..+..-|++=.+.-. .+++.
T Consensus 51 ~eE~~HA~~~~~~l~--gg~~~i~~~~p~~~-----------~~s~~e~l~~al~~E~~e~t~~y~~~~~~A~--eegd~ 115 (191)
T 1lko_A 51 DQEREHAKRLFKFLE--GGDLEIVAAFPAGI-----------IADTHANLIASAAGEHHEYTEMYPSFARIAR--EEGYE 115 (191)
T ss_dssp HHHHHHHHHHHHHCC--SSCCCCCCCCCCCC-----------CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHH--HHTCH
T ss_pred HHHHHHHHHHHHHHc--CCCccccCcCCccc-----------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HhCcH
Confidence 689999999999987 6665532 12200 011223344444555 455555665554332 33678
Q ss_pred HHHHHHHHHHHHHHhHHHhh
Q psy6686 80 ELMDVIHKFRDEEQEHHDTG 99 (131)
Q Consensus 80 ~l~~~i~~~r~dE~~H~d~A 99 (131)
++...++.+-.+|.+|.+..
T Consensus 116 ~~~~~f~~~~~~E~ehe~~~ 135 (191)
T 1lko_A 116 EIARVFASIAVAEEFHEKRF 135 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999998765
No 77
>3b5o_A CADD-like protein of unknown function; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; HET: MSE; 1.35A {Nostoc punctiforme} PDB: 3b5p_A*
Probab=39.57 E-value=1.3e+02 Score=23.35 Aligned_cols=91 Identities=14% Similarity=0.096 Sum_probs=56.9
Q ss_pred HHHHHHHHHH-hcCCCCccchhHHHHHHHHHHHHhhh-cCchhHHHHHHHHHHHHHH---HHHHHHHHhcCCChhcHHHH
Q psy6686 8 HKAKFEELIR-KYRVRPTALLPFWNVAGFVLGAGSAL-LGPKGAMACTVAVESVIVD---HYNEQLRALMSDPAANRELM 82 (131)
Q Consensus 8 Hl~~f~~~l~-~~~~RpS~L~PlW~~~gf~LGa~tal-~G~~~~~a~t~avE~~V~~---Hy~~ql~~L~~~~~~~~~l~ 82 (131)
|-.+|..-|. ..|+.|--..|.=..--|.-+...-. .+...++|-.-|+|..+-- .|.+=+..|..... .++.+
T Consensus 95 H~~lyRr~L~~~lGld~~~~~p~~sT~~~idt~~~lcs~d~~~aLGA~yatE~iaipe~~ly~~li~gL~~~~~-~~~~l 173 (244)
T 3b5o_A 95 HYTLLADGLEEGLGVAVKNTMPSVATSKLLRTVLSLFDRQVDYVLGATYAIEATSIPELTLIVKLVEWLHEGAI-PKDLQ 173 (244)
T ss_dssp HHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CHHHH
T ss_pred hHHHHHHHHHHhcCCCccccCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhCCC-chhHH
Confidence 9999999999 99999888888877777777765543 3445556666799999555 89998888866422 22232
Q ss_pred HHHHH-HHHHHHhHHHhh
Q psy6686 83 DVIHK-FRDEEQEHHDTG 99 (131)
Q Consensus 83 ~~i~~-~r~dE~~H~d~A 99 (131)
.-..- ..++|.+|++.=
T Consensus 174 ~FF~~HidelE~~Ha~~l 191 (244)
T 3b5o_A 174 YFFSKHLDEWEIEHEAGL 191 (244)
T ss_dssp HHHHHHHC-------CHH
T ss_pred HHHHHHhhhhHHHHHHHH
Confidence 22221 134778887653
No 78
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=38.85 E-value=1.1e+02 Score=22.06 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHh
Q psy6686 61 VDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDT 98 (131)
Q Consensus 61 ~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~ 98 (131)
.+-|.+=++.-. .+++.++.+.++.+..+|.+|.+.
T Consensus 84 ~~mY~~~a~~A~--eeg~~~~a~~f~~i~~~E~~H~~~ 119 (170)
T 3pwf_A 84 EEMYPVYNKAAE--FQGEKEAVRTTHYALEAEKIHAEL 119 (170)
T ss_dssp HTHHHHHHHHHH--HHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHH
Confidence 444544443332 235788888899999999999875
No 79
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=38.71 E-value=37 Score=27.58 Aligned_cols=30 Identities=13% Similarity=0.186 Sum_probs=23.2
Q ss_pred hcHHHHHHHHHHHHHHHhHHHhh----HhCCCCC
Q psy6686 77 ANRELMDVIHKFRDEEQEHHDTG----LEHGAEQ 106 (131)
Q Consensus 77 ~~~~l~~~i~~~r~dE~~H~d~A----~~~ga~~ 106 (131)
.++.++..++++.+++.+|.+.= -..|+++
T Consensus 237 ~d~~~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~ 270 (365)
T 3fse_A 237 SDVEAKALFQEMITNKQRHIEYLETYLTRLGEKP 270 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 47889999999999999997653 2255555
No 80
>2keg_A PLNK; protein, peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2keh_A
Probab=33.95 E-value=24 Score=18.81 Aligned_cols=19 Identities=21% Similarity=0.219 Sum_probs=13.8
Q ss_pred CCccchhHHHHHHHHHHHH
Q psy6686 22 RPTALLPFWNVAGFVLGAG 40 (131)
Q Consensus 22 RpS~L~PlW~~~gf~LGa~ 40 (131)
|.|.-|.+=|..||+.|++
T Consensus 1 rrsrkngigyaigyafgav 19 (32)
T 2keg_A 1 RRSRKNGIGYAIGYAFGAV 19 (32)
T ss_dssp CCSSSSSSHHHHHHHHHHH
T ss_pred CcccccCcceeehhhhhHH
Confidence 4566677778888888875
No 81
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=31.69 E-value=31 Score=27.98 Aligned_cols=26 Identities=27% Similarity=0.335 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHHhcCCCCccchh
Q psy6686 3 DQEKAHKAKFEELIRKYRVRPTALLP 28 (131)
Q Consensus 3 ~~E~~Hl~~f~~~l~~~~~RpS~L~P 28 (131)
.||.-|+.+..+.+...|.+|.+-.|
T Consensus 52 ~eEMlHl~l~aNll~AiGg~p~~~~P 77 (317)
T 3hl1_A 52 YQEMLHAQLVSNIANAYGYSPTLSAP 77 (317)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCC
Confidence 58999999999999999999998777
No 82
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=31.10 E-value=10 Score=30.93 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCChhcHHHHHHHHHHHHHHHhHHHhhHh
Q psy6686 55 AVESVIVDHYNEQLRALMSDPAANRELMDVIHKFRDEEQEHHDTGLE 101 (131)
Q Consensus 55 avE~~V~~Hy~~ql~~L~~~~~~~~~l~~~i~~~r~dE~~H~d~A~~ 101 (131)
..|..--+-|++|.... .++++++++..+++||.+|...=.+
T Consensus 29 ~~E~eAi~~Y~q~A~~~-----~d~~~K~vl~~ia~EEk~H~~~f~~ 70 (345)
T 2e0z_A 29 IAELDAINLYEQMARYS-----EDENVRKILLDVAREEKAHVGEFMA 70 (345)
T ss_dssp -----------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556677777544 3677888899999999999876543
No 83
>1c94_A Retro-GCN4 leucine zipper; retro-coiled coil, 4-alpha-helix-bundle, peptide synthesis, gene regulation; 2.08A {Synthetic} SCOP: k.11.1.1
Probab=30.58 E-value=42 Score=18.48 Aligned_cols=22 Identities=41% Similarity=0.566 Sum_probs=15.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHH
Q psy6686 45 GPKGAMACTVAVESVIVDHYNEQL 68 (131)
Q Consensus 45 G~~~~~a~t~avE~~V~~Hy~~ql 68 (131)
|+...+--.-|||.. -|||.-|
T Consensus 3 gregvlkklravene--lhynksl 24 (38)
T 1c94_A 3 GREGVLKKLRAVENE--LHYNKSL 24 (38)
T ss_dssp CSCHHHHHHHHHHHH--HHHHHHH
T ss_pred chHHHHHHHHHHHHH--HHhhHHH
Confidence 566666677788874 5898766
No 84
>3arc_X Photosystem II PSBX protein; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 3prq_X* 3prr_X* 3kzi_X* 3a0b_X* 3a0h_X*
Probab=22.30 E-value=35 Score=19.40 Aligned_cols=19 Identities=26% Similarity=0.310 Sum_probs=12.6
Q ss_pred CCccchhHHHH--HHHHHHHH
Q psy6686 22 RPTALLPFWNV--AGFVLGAG 40 (131)
Q Consensus 22 RpS~L~PlW~~--~gf~LGa~ 40 (131)
-||+-|-+|.+ ||+.++++
T Consensus 3 TpSL~nFl~Sl~aG~vvvv~i 23 (39)
T 3arc_X 3 TPSLKGFFIGLLSGAVVLGLT 23 (39)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHH
Confidence 48888888864 45555553
Done!