BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6687
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W3W5|WIF1_DROME Protein shifted OS=Drosophila melanogaster GN=shf PE=1 SV=2
Length = 456
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+C+C GY G YC TA CFPQCLN G CTAP VC+CP G+QG CEGG C KC NG
Sbjct: 298 ICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQCEGGI---CKDKCLNG 354
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
G C + CQC KGY G C + C C N G C +C CP G +G HCE G
Sbjct: 355 GKCIQKDKCQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIG 409
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%)
Query: 53 CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C KC G+C+ +C+C GY G YC TA CFPQCLN G CTAP VC+CP G+QG C
Sbjct: 283 CSLKCGKNGYCNEHHICKCNVGYTGQYCETAFCFPQCLNGGNCTAPSVCTCPEGYQGTQC 342
Query: 113 EGGT 116
EGG
Sbjct: 343 EGGI 346
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 18 CFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQG 77
C +C NG C +C C G+ G +CE C +C NGG C + +C CP+GYQG
Sbjct: 283 CSLKCGKNGYCNEHHICKCNVGYTGQYCETA---FCFPQCLNGGNCTAPSVCTCPEGYQG 339
Query: 78 TYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
T C +C +CLN G C C C G+ GL CE
Sbjct: 340 TQCEGGICKDKCLNGGKCIQKDKCQCSKGYYGLRCE 375
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
CQC KGY G C + C C N G C +C CP G +G HCE G KC NG
Sbjct: 363 CQCSKGYYGLRCEYSKCVIPCKNEGRCIGNNLCRCPNGLRGDHCEIGRKQRSICKCRNGT 422
Query: 62 WCDSQQMCQCPKGYQGTYCG 81
C S + C+C G+ G +C
Sbjct: 423 -CVSHKHCKCHPGFYGRHCN 441
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
Query: 1 MCQCPKGYQGTYCGT-----AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 47
+C+CP G +G +C ++C +C NGTC + C C PGF G HC G
Sbjct: 394 LCRCPNGLRGDHCEIGRKQRSIC--KC-RNGTCVSHKHCKCHPGFYGRHCNG 442
>sp|Q6IN38|WIF1_RAT Wnt inhibitory factor 1 OS=Rattus norvegicus GN=Wif1 PE=2 SV=1
Length = 379
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 29/141 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
+C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 197 VCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSATCFNGGTC 256
Query: 49 --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
PG PG C Q C NGG C + C+CPKGYQG C +C P C
Sbjct: 257 FYPGKCICPPGLEGEQCELSKCPQPCRNGGKCIGKSKCKCPKGYQGDLCSKPVCEPGCGA 316
Query: 92 NGTCTAPGVCSCPPGFQGLHC 112
+GTC P C C G+ G HC
Sbjct: 317 HGTCHEPNKCQCREGWHGRHC 337
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
C N G C VC CP GF G HCE C +C NGG C + C CP G+ G C
Sbjct: 186 CRNGGFCNERRVCECPDGFYGPHCEKA---LCIPRCMNGGLCVTPGFCICPPGFYGVNCD 242
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
A C C N GTC PG C CPPG +G CE
Sbjct: 243 KANCSATCFNGGTCFYPGKCICPPGLEGEQCE 274
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 57 CSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
C NGG+C+ +++C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 186 CRNGGFCNERRVCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKAN 245
>sp|Q9WUA1|WIF1_MOUSE Wnt inhibitory factor 1 OS=Mus musculus GN=Wif1 PE=2 SV=1
Length = 379
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 29/141 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
+C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 197 VCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC 256
Query: 49 --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
PG PG C Q C NGG C + C+CPKGYQG C +C P C
Sbjct: 257 FYPGKCICPPGLEGEQCELSKCPQPCRNGGKCIGKSKCKCPKGYQGDLCSKPVCEPGCGA 316
Query: 92 NGTCTAPGVCSCPPGFQGLHC 112
+GTC P C C G+ G HC
Sbjct: 317 HGTCHEPNKCQCREGWHGRHC 337
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
C N G C VC CP GF G HCE C +C NGG C + C CP G+ G C
Sbjct: 186 CRNGGFCNERRVCECPDGFYGPHCEKA---LCIPRCMNGGLCVTPGFCICPPGFYGVNCD 242
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
A C C N GTC PG C CPPG +G CE
Sbjct: 243 KANCSTTCFNGGTCFYPGKCICPPGLEGEQCE 274
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 57 CSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
C NGG+C+ +++C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 186 CRNGGFCNERRVCECPDGFYGPHCEKALCIPRCMNGGLCVTPGFCICPPGFYGVNCDKAN 245
>sp|Q9W6F9|WIF1_DANRE Wnt inhibitory factor 1 OS=Danio rerio GN=wif1 PE=2 SV=1
Length = 378
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
+C+C G+ G +C A+C P+CLN G C +PGVC CPPG+ G CE
Sbjct: 195 VCECQDGFYGVHCEKALCSPRCLNGGLCMSPGVCICPPGYFGSSCERANCSTTCLNGGTC 254
Query: 49 --PGP---------------GCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
PG C Q C NGG C + C+C KGY G C A+C P C
Sbjct: 255 FHPGKCICAVSFEGVRCELSKCRQPCRNGGKCTGRNKCKCSKGYHGDLCSKAVCEPSCGA 314
Query: 92 NGTCTAPGVCSCPPGFQGLHC 112
+GTC P C C G+ G HC
Sbjct: 315 HGTCVEPNRCQCREGWHGRHC 335
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 13 CGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCP 72
C A C C N G C VC C GF G+HCE C +C NGG C S +C CP
Sbjct: 175 CQRAKCPGGCRNGGYCNERQVCECQDGFYGVHCEKAL---CSPRCLNGGLCMSPGVCICP 231
Query: 73 KGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
GY G+ C A C CLN GTC PG C C F+G+ CE
Sbjct: 232 PGYFGSSCERANCSTTCLNGGTCFHPGKCICAVSFEGVRCE 272
>sp|Q8N2E2|VWDE_HUMAN von Willebrand factor D and EGF domain-containing protein OS=Homo
sapiens GN=VWDE PE=2 SV=4
Length = 1590
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+C C +GY G ++C P C+N G C P CSCP G+ G C P C QKC NG
Sbjct: 1473 VCVCREGYTGRRFQKSICDPTCMNGGKCVGPSTCSCPSGWSGKRCNT---PICLQKCKNG 1529
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
G C + +C CP ++G C +C P+CL G C P VCSC + G+ CE
Sbjct: 1530 GECIAPSICHCPSSWEGVRCQIPICNPKCLYGGRCIFPNVCSCRTEYSGVKCE 1582
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+CQC G+ G C C P C + GTC A +C+CP GF G CE C++ C NG
Sbjct: 1345 ICQCLPGHGGATCDEEHCNPPCQHGGTCLAGNLCTCPYGFVGPRCETMV---CNRHCENG 1401
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115
G C + +CQC G+ G C TA+C P CLN G+C P C CP GF G HC+
Sbjct: 1402 GQCLTPDICQCKPGWYGPTCSTALCDPVCLNGGSCNKPNTCLCPNGFFGEHCQNA 1456
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC--------------- 45
+CQC G+ G C TA+C P CLN G+C P C CP GF G HC
Sbjct: 1409 ICQCKPGWYGPTCSTALCDPVCLNGGSCNKPNTCLCPNGFFGEHCQNAFCHPPCKNGGHC 1468
Query: 46 ---------EGGPGPG-----CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
EG G CD C NGG C C CP G+ G C T +C +C N
Sbjct: 1469 MRNNVCVCREGYTGRRFQKSICDPTCMNGGKCVGPSTCSCPSGWSGKRCNTPICLQKCKN 1528
Query: 92 NGTCTAPGVCSCPPGFQGLHCE 113
G C AP +C CP ++G+ C+
Sbjct: 1529 GGECIAPSICHCPSSWEGVRCQ 1550
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 28 CTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFP 87
C AP +C C PG+ G +C+ CD C N G C +CQC G+ G C C P
Sbjct: 1308 CVAPNICKCKPGYIGSNCQTAL---CDPDCKNHGKCIKPNICQCLPGHGGATCDEEHCNP 1364
Query: 88 QCLNNGTCTAPGVCSCPPGFQGLHCE 113
C + GTC A +C+CP GF G CE
Sbjct: 1365 PCQHGGTCLAGNLCTCPYGFVGPRCE 1390
>sp|Q9Y5W5|WIF1_HUMAN Wnt inhibitory factor 1 OS=Homo sapiens GN=WIF1 PE=1 SV=3
Length = 379
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 70/141 (49%), Gaps = 29/141 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG------------ 48
+C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 197 ICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTC 256
Query: 49 --PG-----PG----------CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLN 91
PG PG C Q C NGG C + C+C KGYQG C +C P C
Sbjct: 257 FYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGA 316
Query: 92 NGTCTAPGVCSCPPGFQGLHC 112
+GTC P C C G+ G HC
Sbjct: 317 HGTCHEPNKCQCQEGWHGRHC 337
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
C N G C +C CP GF G HCE C +C NGG C + C CP G+ G C
Sbjct: 186 CRNGGFCNERRICECPDGFHGPHCEKAL---CTPRCMNGGLCVTPGFCICPPGFYGVNCD 242
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
A C C N GTC PG C CPPG +G CE
Sbjct: 243 KANCSTTCFNGGTCFYPGKCICPPGLEGEQCE 274
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 57 CSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
C NGG+C+ +++C+CP G+ G +C A+C P+C+N G C PG C CPPGF G++C+
Sbjct: 186 CRNGGFCNERRICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKAN 245
>sp|Q9W6F8|WIF1_XENLA Wnt inhibitory factor 1 OS=Xenopus laevis GN=wif1 PE=2 SV=1
Length = 374
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 3/112 (2%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+C CP GY G C C CLN GTC PG C CP G++G CE C Q C NG
Sbjct: 224 LCICPPGYYGINCDKVNCTTHCLNGGTCFYPGKCICPSGYEGEQCETSK---CQQPCRNG 280
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G C + C+C KGYQG C +C P C +GTC P C C G+ G +C
Sbjct: 281 GKCSGKNKCKCSKGYQGDLCSKPVCEPSCGAHGTCIEPNKCQCKEGWNGRYC 332
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 13 CGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCP 72
C A C C N G C VC CP GF G HCE C +C NGG C + +C CP
Sbjct: 172 CQQAKCTGGCRNGGFCNDRHVCECPDGFYGPHCEKAL---CMPRCMNGGLCVTPGLCICP 228
Query: 73 KGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
GY G C C CLN GTC PG C CP G++G CE
Sbjct: 229 PGYYGINCDKVNCTTHCLNGGTCFYPGKCICPSGYEGEQCE 269
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
+C+C GY G++C + C P C + GTC CSCP GF G CE
Sbjct: 3847 LCKCLPGYAGSWCEIDIDECLPSPCHSGGTCHNLVGGFSCSCPDGFTGRACERDINECLQ 3906
Query: 55 QKCSNGGWCDS---QQMCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPGV----CSC 103
C NG C + C C GY G C +++ C P C N G+C + GV C C
Sbjct: 3907 SPCKNGAICQNFPGSFNCVCKTGYTGKMCESSVNYCECNP-CFNGGSCQS-GVDSYYCHC 3964
Query: 104 PPGFQGLHCE 113
P G G HCE
Sbjct: 3965 PFGVFGKHCE 3974
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
Query: 31 PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--C 85
P +C C PG+ G CE C +GG C + C CP G+ G C + C
Sbjct: 3845 PFLCKCLPGYAGSWCEIDIDECLPSPCHSGGTCHNLVGGFSCSCPDGFTGRACERDINEC 3904
Query: 86 FPQ-CLNNGTCTA-PGV--CSCPPGFQGLHCE 113
C N C PG C C G+ G CE
Sbjct: 3905 LQSPCKNGAICQNFPGSFNCVCKTGYTGKMCE 3936
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 37/101 (36%), Gaps = 27/101 (26%)
Query: 28 CTAPGVCSCPPGFQGLHCEGG--------PGPGCDQKCSNGGWCD----SQQMCQCPKGY 75
C P +C+ P + L C PG C NGG C+ S C CP +
Sbjct: 4398 CRGPNICASNPCWGDLLCINQWYAYRCVPPGDCASHPCQNGGSCEPGLHSGFTCSCPDSH 4457
Query: 76 QGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
G C + CL GV CP QG C+ G+
Sbjct: 4458 TGRTCEMVVA---CL--------GVL-CP---QGKVCKAGS 4483
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 76.3 bits (186), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C+C GY G++C + C P C N GTC CSCP GF G CE
Sbjct: 3850 CKCVPGYAGSWCEVDIDECLPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECLPS 3909
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPGV----CSCP 104
C +G C + C C GY G C +++ C P C N G+C + GV C CP
Sbjct: 3910 PCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCECNP-CFNGGSCQS-GVESYYCHCP 3967
Query: 105 PGFQGLHCE 113
G G HCE
Sbjct: 3968 FGVFGKHCE 3976
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 31 PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--C 85
P C C PG+ G CE C NGG C + C CP+G+ G C + C
Sbjct: 3847 PSQCKCVPGYAGSWCEVDIDECLPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINEC 3906
Query: 86 FPQ-CLNNGTCTA-PG--VCSCPPGFQGLHCE 113
P C + C PG C C G+ G CE
Sbjct: 3907 LPSPCKHGAVCQNFPGGFNCVCKTGYTGKMCE 3938
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 39/101 (38%), Gaps = 27/101 (26%)
Query: 28 CTAPGVCSCPPGFQGLHCEGG--------PGPGCDQKCSNGGWCD----SQQMCQCPKGY 75
C P +C+ P + L C PG C NGG C+ S C CP+ +
Sbjct: 4399 CRGPNICASNPCWGDLLCINQWYAYKCVPPGDCASHPCQNGGSCEPGLLSGYTCSCPESH 4458
Query: 76 QGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
G C T + CL GV CP QG C+ G+
Sbjct: 4459 TGRTCETVVA---CL--------GVL-CP---QGKVCKAGS 4484
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 41 QGL--HCEGGPGPGCDQKCSNGGWCD---SQQMCQCPKGYQGTYC 80
QG+ C G C +GG C S Q CQC +G G YC
Sbjct: 4155 QGILDQCPRLEGTCARNPCQHGGTCVDFWSWQQCQCMEGLTGKYC 4199
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 18/130 (13%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCDQ 55
CQC G+ G C C P C + C G C CP G HCE C
Sbjct: 3999 CQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERSDVCYS 4058
Query: 56 K-CSNGGWCD-----SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA--PGV-CSC 103
K C NGG C S C C G++G C + C P CL+ G C + PG C+C
Sbjct: 4059 KPCRNGGSCQRSPDGSSYFCLCRPGFRGNQCESVSDSCRPNPCLHGGLCVSLKPGYKCNC 4118
Query: 104 PPGFQGLHCE 113
PG G HCE
Sbjct: 4119 TPGRYGRHCE 4128
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C G+ G C A+C C NG + G+C C GF+G CE C+ G
Sbjct: 456 CHCAPGFTGRTCDEAVCPVVCSGNGVFSG-GICVCKSGFKGKECEMRHNWCEVADCNGRG 514
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMC-FPQCLNNGTCTAPGVCSCPPGFQGLHC 112
CD+ C+C G+ G C C C + G C G C C G++G C
Sbjct: 515 RCDTDGRCRCNPGWTGEACELRACPHASCHDRGVCVN-GTCYCMDGWRGNDC 565
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+CQC G+ C C QC+N G C G C C G++G +C C C +
Sbjct: 642 ICQCESGWDSVDCSQQAC--QCVN-GDCLDDGSCQCWKGWRGSNCT---DKKCAIGCEDR 695
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTC-----TAPGVCSCPPGFQGLHC 112
G C S C+C G+ G C C QC G C ++ C C G G+ C
Sbjct: 696 GKCASDGSCKCSSGWNGENCAIDGCPNQCSGKGECGMDRRSSEWSCRCQAGSTGVDC 752
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
CQC KG++G+ C C C + G C + G C C G+ G +C GC +CS G
Sbjct: 672 CQCWKGWRGSNCTDKKCAIGCEDRGKCASDGSCKCSSGWNGENCAID---GCPNQCSGKG 728
Query: 62 WC-----DSQQMCQCPKGYQGTYCGTAM 84
C S+ C+C G G C ++
Sbjct: 729 ECGMDRRSSEWSCRCQAGSTGVDCSVSV 756
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 28 CTAPG-----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGT 82
C+A G +C C G+ + C C +C NG C CQC KG++G+ C
Sbjct: 632 CSAHGQLIDDICQCESGWDSVDCSQ---QAC--QCVNGD-CLDDGSCQCWKGWRGSNCTD 685
Query: 83 AMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C C + G C + G C C G+ G +C
Sbjct: 686 KKCAIGCEDRGKCASDGSCKCSSGWNGENC 715
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 8/100 (8%)
Query: 17 MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQ 76
+C C G C G C C PGF G C+ C CS G S +C C G++
Sbjct: 440 VCESNCNQRGECVH-GKCHCAPGFTGRTCDEAV---CPVVCSGNG-VFSGGICVCKSGFK 494
Query: 77 GTYCGTAMCFPQ---CLNNGTCTAPGVCSCPPGFQGLHCE 113
G C + + C G C G C C PG+ G CE
Sbjct: 495 GKECEMRHNWCEVADCNGRGRCDTDGRCRCNPGWTGEACE 534
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 14/87 (16%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPGVCSCPPGFQGLHCE--GGPGPGCDQ 55
+C C G++G C + + C G C G C C PG+ G CE P C
Sbjct: 486 ICVCKSGFKGKECEMRHNWCEVADCNGRGRCDTDGRCRCNPGWTGEACELRACPHASCHD 545
Query: 56 K--CSNGGWCDSQQMCQCPKGYQGTYC 80
+ C NG C C G++G C
Sbjct: 546 RGVCVNG-------TCYCMDGWRGNDC 565
>sp|Q80Z71|TENN_MOUSE Tenascin-N OS=Mus musculus GN=Tnn PE=1 SV=2
Length = 1560
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C +G++G C C C +G C G C C + G+ C C Q CS G
Sbjct: 155 CHCDQGWEGADCDQPTCPGACNGHGRCV-DGQCVCDAPYVGVDCAYA---ACPQDCSGHG 210
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C Q +CQC + + C C C NG C G C C GF G C
Sbjct: 211 VC-VQGVCQCHEDFTAEDCSEQRCPGDCSGNGFCDT-GECYCEMGFTGPDC 259
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGP 51
+CQC + + C C C NG C G C C GF G C P
Sbjct: 216 VCQCHEDFTAEDCSEQRCPGDCSGNGFCDT-GECYCEMGFTGPDCSQVVAP 265
>sp|P35555|FBN1_HUMAN Fibrillin-1 OS=Homo sapiens GN=FBN1 PE=1 SV=3
Length = 2871
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+CP G C C+ +C NGG C S C
Sbjct: 77 GNQCIVPICRHSC-GDGFCSRPNMCTCPSGQIAPSCGSRSIQHCNIRCMNGGSC-SDDHC 134
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 135 LCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
C C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 134 CLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 1 MCQCPKGYQGTYCGTA---MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKC 57
MC CP G CG+ C +C+N G+C+ C C G+ G HC P C+ C
Sbjct: 99 MCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDDH-CLCQKGYIGTHC---GQPVCESGC 154
Query: 58 SNGGWCDSQQMCQCPKGYQGTYC 80
NGG C + C C G+ G C
Sbjct: 155 LNGGRCVAPNRCACTYGFTGPQC 177
>sp|P98133|FBN1_BOVIN Fibrillin-1 OS=Bos taurus GN=FBN1 PE=1 SV=1
Length = 2871
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+CP G C C+ +C NGG C S C
Sbjct: 77 GNQCIVPICRHSC-GDGFCSRPNMCTCPSGQIAPSCGSRSIQHCNIRCMNGGSC-SDDHC 134
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 135 LCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
C C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 134 CLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 1 MCQCPKGYQGTYCGTA---MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKC 57
MC CP G CG+ C +C+N G+C+ C C G+ G HC P C+ C
Sbjct: 99 MCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDDH-CLCQKGYIGTHC---GQPVCESGC 154
Query: 58 SNGGWCDSQQMCQCPKGYQGTYC 80
NGG C + C C G+ G C
Sbjct: 155 LNGGRCVAPNRCACTYGFTGPQC 177
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C + GT C + + CFP C N G+C G VCSC G G+ CE +
Sbjct: 4045 CSCLSQFTGTNCESEITACFPNPCRNGGSCDPIGNTFVCSCKAGLTGVTCEDDVDECERE 4104
Query: 56 KCSNGGWCDS---QQMCQCPKGYQGTYCG 81
+C NGG C + C C GY G YCG
Sbjct: 4105 ECENGGSCVNLFGSFFCNCTPGYVGQYCG 4133
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 22 CLNNGTCTA-PG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCD---SQQMCQCPKG 74
CL+ G+C++ P CSC F G +CE C NGG CD + +C C G
Sbjct: 4029 CLHGGSCSSLPSGGYQCSCLSQFTGTNCESEITACFPNPCRNGGSCDPIGNTFVCSCKAG 4088
Query: 75 YQGTYCGTAM--C-FPQCLNNGTCT---APGVCSCPPGFQGLHC 112
G C + C +C N G+C C+C PG+ G +C
Sbjct: 4089 LTGVTCEDDVDECEREECENGGSCVNLFGSFFCNCTPGYVGQYC 4132
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 38/97 (39%), Gaps = 20/97 (20%)
Query: 23 LNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGT 82
L G P C P G C P +GG+ C C + GT C +
Sbjct: 4013 LKLGCVLYPDACQRSPCLHGGSCSSLP---------SGGY-----QCSCLSQFTGTNCES 4058
Query: 83 AM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCE 113
+ CFP C N G+C G VCSC G G+ CE
Sbjct: 4059 EITACFPNPCRNGGSCDPIGNTFVCSCKAGLTGVTCE 4095
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 24/83 (28%)
Query: 36 CPPGFQGLHC--EGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNG 93
CP ++ + C GG PG + C CP+ Q C+
Sbjct: 3775 CPRFYRNVRCTCNGGVCPGSNDPCVEK---------PCPEDMQ------------CVGYE 3813
Query: 94 TCTAPGVCSCPPGFQGLHCEGGT 116
P +C CPPG G C G T
Sbjct: 3814 ASRRPFLCQCPPGKLG-ECSGHT 3835
>sp|Q61554|FBN1_MOUSE Fibrillin-1 OS=Mus musculus GN=Fbn1 PE=1 SV=1
Length = 2871
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+CP G C C+ +C NGG C S C
Sbjct: 77 GNQCIVPICRHSC-GDGFCSRPNMCTCPSGQISPSCGSRSIQHCNIRCMNGGSC-SDDHC 134
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 135 LCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
C C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 134 CLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 1 MCQCPKGYQGTYCGTA---MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKC 57
MC CP G CG+ C +C+N G+C+ C C G+ G HC P C+ C
Sbjct: 99 MCTCPSGQISPSCGSRSIQHCNIRCMNGGSCSDDH-CLCQKGYIGTHC---GQPVCESGC 154
Query: 58 SNGGWCDSQQMCQCPKGYQGTYC 80
NGG C + C C G+ G C
Sbjct: 155 LNGGRCVAPNRCACTYGFTGPQC 177
>sp|Q9TV36|FBN1_PIG Fibrillin-1 OS=Sus scrofa GN=FBN1 PE=2 SV=1
Length = 2871
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+CP G C C+ +C NGG C S C
Sbjct: 77 GNQCIVPICRHSC-GDGFCSRPNMCTCPSGQIAPSCGSRSIQHCNIRCMNGGSC-SDDHC 134
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 135 LCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
C C KGY GT+CG +C CLN G C AP C+C GF G CE
Sbjct: 134 CLCQKGYIGTHCGQPVCESGCLNGGRCVAPNRCACTYGFTGPQCE 178
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 1 MCQCPKGYQGTYCGTA---MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKC 57
MC CP G CG+ C +C+N G+C+ C C G+ G HC P C+ C
Sbjct: 99 MCTCPSGQIAPSCGSRSIQHCNIRCMNGGSCSDDH-CLCQKGYIGTHC---GQPVCESGC 154
Query: 58 SNGGWCDSQQMCQCPKGYQGTYC 80
NGG C + C C G+ G C
Sbjct: 155 LNGGRCVAPNRCACTYGFTGPQC 177
>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1
SV=3
Length = 3571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 16 AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGY 75
A+C C N G C P CSCP G+ G CE P C C NGG C + C CP G+
Sbjct: 3470 AVCRFPCQNGGICQRPNACSCPEGWMGRLCEE---PICILPCLNGGRCVAPYQCDCPPGW 3526
Query: 76 QGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G+ C TA+C CLN G C P C C + G +C
Sbjct: 3527 TGSRCHTAVCQSPCLNGGKCVRPNRCHCLSSWTGHNC 3563
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
CL NGT T+P +C C C NGG C C CP+G+ G C
Sbjct: 3456 CLENGTWTSPPICRAV---------------CRFPCQNGGICQRPNACSCPEGWMGRLCE 3500
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
+C CLN G C AP C CPPG+ G C
Sbjct: 3501 EPICILPCLNGGRCVAPYQCDCPPGWTGSRCHTAV 3535
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
+C CP GY G C T + C P CLNNG C +C CP G+ G CE
Sbjct: 1216 VCLCPLGYTGLKCETDIDECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSS 1275
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPP 105
C N G C + C C KG+ G +C T + Q CLNN C +C CPP
Sbjct: 1276 SPCLNKGICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCEDQVGGFLCKCPP 1335
Query: 106 GFQGLHC 112
GF G C
Sbjct: 1336 GFLGTRC 1342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C CP+G+ G C +C CLN G C AP C CPPG+ G C C C NGG
Sbjct: 3488 CSCPEGWMGRLCEEPICILPCLNGGRCVAPYQCDCPPGWTGSRCHTAV---CQSPCLNGG 3544
Query: 62 WCDSQQMCQCPKGYQGTYCG 81
C C C + G C
Sbjct: 3545 KCVRPNRCHCLSSWTGHNCS 3564
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C KG+ G +C T + Q CLNN C +C CPPGF G C Q
Sbjct: 1293 CTCVKGFVGLHCETEVNECQSNPCLNNAVCEDQVGGFLCKCPPGFLGTRCGKNVDECLSQ 1352
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAP---GVCSCPPG 106
C NG C + C C G+ G++C + Q C N TC C C PG
Sbjct: 1353 PCKNGATCKDGANSFRCLCAAGFTGSHCELNINECQSNPCRNQATCVDELNSYSCKCQPG 1412
Query: 107 FQGLHCE 113
F G CE
Sbjct: 1413 FSGKRCE 1419
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 68 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCE 113
+C CP GY G C T + C P CLNNG C +C CP G+ G CE
Sbjct: 1216 VCLCPLGYTGLKCETDIDECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCE 1267
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
+C+CP G+ GT CG + C Q C N TC C C GF G HCE
Sbjct: 1330 LCKCPPGFLGTRCGKNVDECLSQPCKNGATCKDGANSFRCLCAAGFTGSHCELNINECQS 1389
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGT 82
C N C + C+C G+ G C T
Sbjct: 1390 NPCRNQATCVDELNSYSCKCQPGFSGKRCET 1420
>sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Rattus norvegicus GN=Svep1
PE=1 SV=1
Length = 3564
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGY 75
A+C C N G C P CSCP G+ G CE P C C NGG C + C CP G+
Sbjct: 3463 AVCRFPCQNGGVCQRPNACSCPDGWMGRLCEE---PICILPCLNGGRCVAPYRCDCPAGW 3519
Query: 76 QGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G+ C TA C CLN G C P C C + G C
Sbjct: 3520 TGSRCHTATCQSPCLNGGKCVRPNRCHCLSSWTGHDC 3556
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
CL NGT T P +C C C NGG C C CP G+ G C
Sbjct: 3449 CLENGTWTPPPICRAV---------------CRFPCQNGGVCQRPNACSCPDGWMGRLCE 3493
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
+C CLN G C AP C CP G+ G C T
Sbjct: 3494 EPICILPCLNGGRCVAPYRCDCPAGWTGSRCHTAT 3528
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 9 QGTYCGTAMCFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCD 64
Q Y CF C N+GTC G VC CPPG+ GL CE C NGG C
Sbjct: 1183 QNKYEVFHECFLNPCHNSGTCQQLGRGYVCLCPPGYTGLKCETDIDECSSLPCLNGGICR 1242
Query: 65 SQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCT---APGVCSCPPGFQGLHCE 113
+ C+C GY G C + CLN GTCT A C+C G+ G+HCE
Sbjct: 1243 DKVGGFTCECSSGYTGQICEENINECSSSPCLNKGTCTDGLASYRCTCVSGYVGVHCE 1300
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 53/128 (41%), Gaps = 15/128 (11%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C C GY G +C T + Q CLNN C C CPPGF G CE
Sbjct: 1287 RCTCVSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLS 1346
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAP---GVCSCPP 105
Q C NG C + CQCP G+ G +C + Q C N TC C C P
Sbjct: 1347 QPCQNGATCKDGANSFRCQCPAGFTGPHCELNINECQSNPCRNQATCVDELNSYSCKCRP 1406
Query: 106 GFQGLHCE 113
GF G CE
Sbjct: 1407 GFSGRRCE 1414
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C CP G+ G C +C CLN G C AP C CP G+ G C C C NGG
Sbjct: 3481 CSCPDGWMGRLCEEPICILPCLNGGRCVAPYRCDCPAGWTGSRCHTA---TCQSPCLNGG 3537
Query: 62 WCDSQQMCQCPKGYQGTYCG 81
C C C + G C
Sbjct: 3538 KCVRPNRCHCLSSWTGHDCS 3557
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Query: 1 MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
+C CP GY G C T + P CLN G C C C G+ G CE
Sbjct: 1211 VCLCPPGYTGLKCETDIDECSSLP-CLNGGICRDKVGGFTCECSSGYTGQICEENINECS 1269
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCP 104
C N G C + C C GY G +C T + Q CLNN C C CP
Sbjct: 1270 SSPCLNKGTCTDGLASYRCTCVSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCP 1329
Query: 105 PGFQGLHCEGGT 116
PGF G CE
Sbjct: 1330 PGFLGTRCEKNV 1341
>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Mus musculus GN=Svep1 PE=1
SV=1
Length = 3567
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Query: 16 AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGY 75
A+C C N G C P CSCP G+ G CE P C C NGG C + C CP G+
Sbjct: 3466 AVCRFPCQNGGVCQRPNACSCPDGWMGRLCEE---PICILPCLNGGRCVAPYQCDCPTGW 3522
Query: 76 QGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G+ C TA C CLN G C P C C + G C
Sbjct: 3523 TGSRCHTATCQSPCLNGGKCIRPNRCHCLSAWTGHDC 3559
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 55/128 (42%), Gaps = 15/128 (11%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C C KGY G +C T + Q CLNN C C CPPGF G CE
Sbjct: 1291 RCTCVKGYMGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLS 1350
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAP---GVCSCPP 105
Q C NG C + CQCP G+ GT+C + Q C N TC C C P
Sbjct: 1351 QPCQNGATCKDGANSFRCQCPAGFTGTHCELNINECQSNPCRNQATCVDELNSYSCKCQP 1410
Query: 106 GFQGLHCE 113
GF G CE
Sbjct: 1411 GFSGHRCE 1418
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 5 PKGYQGTYCGTAMCFPQCL-----NNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQK 56
P Q Y ++ F +C N+GTC G VC CPPG+ GL CE
Sbjct: 1179 PGHSQNKYEVSSQVFHECFLNPCHNSGTCQQLGRGYVCLCPPGYTGLKCETDIDECSSLP 1238
Query: 57 CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCT---APGVCSCPPGF 107
C NGG C Q C+C GY G C + CLN GTCT A C+C G+
Sbjct: 1239 CLNGGICRDQVGGFTCECSLGYSGQICEENINECISSPCLNKGTCTDGLASYRCTCVKGY 1298
Query: 108 QGLHCE 113
G+HCE
Sbjct: 1299 MGVHCE 1304
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 38/95 (40%), Gaps = 15/95 (15%)
Query: 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81
CL NGT T VC C C NGG C C CP G+ G C
Sbjct: 3452 CLENGTWTPSPVCRAV---------------CRFPCQNGGVCQRPNACSCPDGWMGRLCE 3496
Query: 82 TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
+C CLN G C AP C CP G+ G C T
Sbjct: 3497 EPICILPCLNGGRCVAPYQCDCPTGWTGSRCHTAT 3531
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 53/132 (40%), Gaps = 17/132 (12%)
Query: 1 MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
+C CP GY G C T + P CLN G C C C G+ G CE
Sbjct: 1215 VCLCPPGYTGLKCETDIDECSSLP-CLNGGICRDQVGGFTCECSLGYSGQICEENINECI 1273
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCP 104
C N G C + C C KGY G +C T + Q CLNN C C CP
Sbjct: 1274 SSPCLNKGTCTDGLASYRCTCVKGYMGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCP 1333
Query: 105 PGFQGLHCEGGT 116
PGF G CE
Sbjct: 1334 PGFLGTRCEKNV 1345
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C CP G+ G C +C CLN G C AP C CP G+ G C C C NGG
Sbjct: 3484 CSCPDGWMGRLCEEPICILPCLNGGRCVAPYQCDCPTGWTGSRCHTA---TCQSPCLNGG 3540
Query: 62 WCDSQQMCQCPKGYQGTYCG 81
C C C + G C
Sbjct: 3541 KCIRPNRCHCLSAWTGHDCS 3560
>sp|Q92752|TENR_HUMAN Tenascin-R OS=Homo sapiens GN=TNR PE=1 SV=3
Length = 1358
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 44/111 (39%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C Y G C C C + G C G C C + G C PG CS G
Sbjct: 219 CICDSEYSGDDCSELRCPTDCSSRGLCV-DGECVCEEPYTGEDCRELRCPG---DCSGKG 274
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C + C C +GY G CG C C G C G+C C G+QG C
Sbjct: 275 RC-ANGTCLCEEGYVGEDCGQRQCLNACSGRGQCEE-GLCVCEEGYQGPDC 323
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGP 51
C C +GY G CG C C G C G+C C G+QG C P
Sbjct: 281 CLCEEGYVGEDCGQRQCLNACSGRGQCEE-GLCVCEEGYQGPDCSAVAPP 329
>sp|O35516|NOTC2_MOUSE Neurogenic locus notch homolog protein 2 OS=Mus musculus GN=Notch2
PE=1 SV=1
Length = 2470
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+QG C + C + C+NNG C VC CPPGF G+ CE
Sbjct: 857 CLCAPGWQGKRCTVDVDECISKPCMNNGVCHNTQGSYVCECPPGFSGMDCEEDINDCLAN 916
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPG 106
C NGG C CQC G+ G C T M C + C N GTC+ C+CP G
Sbjct: 917 PCQNGGSCVDHVNTFSCQCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAG 976
Query: 107 FQGLHCEGGT 116
F G+HCE
Sbjct: 977 FHGVHCENNI 986
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 59/133 (44%), Gaps = 20/133 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN-----GTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
CQCP GY G+YC + +C +N TC C C PG+QG++CE
Sbjct: 1133 CQCPLGYTGSYCEEQL--DECASNPCQHGATCNDFIGGYRCECVPGYQGVNCEYEVDECQ 1190
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG---VCSC 103
+Q C NGG C + C CP G +G C + P CLN G C C C
Sbjct: 1191 NQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDECAGGPHCLNGGQCVDRIGGYTCRC 1250
Query: 104 PPGFQGLHCEGGT 116
PGF G CEG
Sbjct: 1251 LPGFAGERCEGDI 1263
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 55/135 (40%), Gaps = 21/135 (15%)
Query: 2 CQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C CP G +G C + P CLN G C C C PGF G CEG
Sbjct: 1209 CSCPPGTRGLLCEENIDECAGGPHCLNGGQCVDRIGGYTCRCLPGFAGERCEGDINECLS 1268
Query: 55 QKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------V 100
CS+ G D Q+ C C + G +C T + PQ CLN GTC +
Sbjct: 1269 NPCSSEGSLDCVQLKNNYNCICRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNMPDGFI 1328
Query: 101 CSCPPGFQGLHCEGG 115
C CPPGF G +
Sbjct: 1329 CRCPPGFSGARLQSS 1343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
CQC G+ G C T M C + C N GTC+ C+CP GF G+HCE +
Sbjct: 933 CQCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 992
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C CP G+ G +C + CLN GTC C CP G
Sbjct: 993 SCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNAGTCVDGLGTYRCICPLG 1052
Query: 107 FQGLHCE 113
+ G +C+
Sbjct: 1053 YTGKNCQ 1059
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 29/140 (20%)
Query: 1 MCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV---CSCPPGFQGLHCEG------- 47
C CP GY G C T + C N GTC C CPPG+ G +C+
Sbjct: 1046 RCICPLGYTGKNCQTLVNLCSRSPCKNKGTCVQEKARPHCLCPPGWDGAYCDVLNVSCKA 1105
Query: 48 ---GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAMCFPQCLNN-----GTCT 96
G + C + G C + CQCP GY G+YC + +C +N TC
Sbjct: 1106 AALQKGVPVEHLCQHSGICINAGNTHHCQCPLGYTGSYCEEQL--DECASNPCQHGATCN 1163
Query: 97 APG---VCSCPPGFQGLHCE 113
C C PG+QG++CE
Sbjct: 1164 DFIGGYRCECVPGYQGVNCE 1183
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 54/134 (40%), Gaps = 18/134 (13%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPGV-----CSCPPGFQGLHCEGGPGPGC 53
C+CP+G+ G YC +C N GTC G+ C C PGF G C+ C
Sbjct: 50 FCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVPQGMLGKATCRCAPGFTGEDCQYSTSHPC 109
Query: 54 --DQKCSNGGWC----DSQQMCQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPG---VCS 102
+ C NGG C C C G+ G C T C C N TCT+ C
Sbjct: 110 FVSRPCQNGGTCHMLSRDTYECTCQVGFTGKQCQWTDACLSHPCENGSTCTSVASQFSCK 169
Query: 103 CPPGFQGLHCEGGT 116
CP G G CE
Sbjct: 170 CPAGLTGQKCEADI 183
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
+C+CP G+ G C + C C N G+C C C PGF G C+
Sbjct: 894 VCECPPGFSGMDCEEDINDCLANPCQNGGSCVDHVNTFSCQCHPGFIGDKCQTDMNECLS 953
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPP 105
+ C NGG C + C CP G+ G +C + C N GTC C CP
Sbjct: 954 EPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPV 1013
Query: 106 GFQGLHC 112
GF G C
Sbjct: 1014 GFTGPFC 1020
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 1 MCQCPKGYQGTYCGTAMC--FPQCLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCD 54
CQC +G+ G +C + P C+N GTC G C+C PGF+G CE +
Sbjct: 206 RCQCGQGFTGQHCDSPYVRGLP-CVNGGTCRQTGDFTLECNCLPGFEGSTCERNIDDCPN 264
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ---CLNNGTCT 96
KC NGG C + C+CP + G +C + C Q C N GTCT
Sbjct: 265 HKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCDQ- 55
C C G+ G C T C C N TCT+ C CP G G CE CD
Sbjct: 131 CTCQVGFTGKQCQWTDACLSHPCENGSTCTSVASQFSCKCPAGLTGQKCEADINE-CDIP 189
Query: 56 -KCSNGGWCDS---QQMCQCPKGYQGTYCGTAMC--FPQCLNNGTCTAPG----VCSCPP 105
+C +GG C + CQC +G+ G +C + P C+N GTC G C+C P
Sbjct: 190 GRCQHGGTCLNLPGSYRCQCGQGFTGQHCDSPYVRGLP-CVNGGTCRQTGDFTLECNCLP 248
Query: 106 GFQGLHCE 113
GF+G CE
Sbjct: 249 GFEGSTCE 256
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+C KGY G C + C C N+ TC C C PGF+G+HCE
Sbjct: 440 CECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSN 499
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GVCSCPPG 106
C N G C + C CP G+ G C + CLN C C C G
Sbjct: 500 PCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATG 559
Query: 107 FQGLHCE 113
F G+ C+
Sbjct: 560 FTGILCD 566
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 47/110 (42%), Gaps = 19/110 (17%)
Query: 22 CLNNGTCTA----PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM-----CQCP 72
C+N GTC G C CP GF G +C+ P +C NGG C Q M C+C
Sbjct: 35 CVNEGTCVTYHNGTGFCRCPEGFLGEYCQHR-DPCEKNRCQNGGTCVPQGMLGKATCRCA 93
Query: 73 KGYQGTYCGTAMCFP-----QCLNNGTCTAPGV----CSCPPGFQGLHCE 113
G+ G C + P C N GTC C+C GF G C+
Sbjct: 94 PGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSRDTYECTCQVGFTGKQCQ 143
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 22/133 (16%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE---GGPGPGCDQK- 56
+C CP+GY+G C + N+ C G C G HCE G GP C+
Sbjct: 398 ICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDI 455
Query: 57 -------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---V 100
C N C + C C G++G +C + Q C+NNG C
Sbjct: 456 NECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQ 515
Query: 101 CSCPPGFQGLHCE 113
C CPPGF G C+
Sbjct: 516 CLCPPGFTGPVCQ 528
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 52/131 (39%), Gaps = 27/131 (20%)
Query: 2 CQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------VCSCPPGFQGLHCEGGPGPG 52
C C + G +C T + PQ CLN GTC +C CPPGF G + G
Sbjct: 1288 CICRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNMPDGFICRCPPGFSGARLQSSCG-- 1345
Query: 53 CDQKCSNGGWC---DSQQMCQC--PKGYQGTYCGTAMCFPQCLNNGTCTAPG-----VCS 102
KC G C DS C C PK C + C + GTC C
Sbjct: 1346 -QVKCRRGEQCIHTDSGPRCFCLNPKD-----CESGCASNPCQHGGTCYPQRQPPHYSCR 1399
Query: 103 CPPGFQGLHCE 113
CPP F G HCE
Sbjct: 1400 CPPSFGGSHCE 1410
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 16/87 (18%)
Query: 41 QGLHCEGGPGPGCDQKCSNGGWCDSQQ----MCQCPKGYQGTYCGTAM--CFPQCLNNGT 94
L C GG P C N G C + C+CP+G+ G YC +C N GT
Sbjct: 24 HALQCRGGQEP-----CVNEGTCVTYHNGTGFCRCPEGFLGEYCQHRDPCEKNRCQNGGT 78
Query: 95 CTAPGV-----CSCPPGFQGLHCEGGT 116
C G+ C C PGF G C+ T
Sbjct: 79 CVPQGMLGKATCRCAPGFTGEDCQYST 105
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 50/127 (39%), Gaps = 16/127 (12%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ G C + CLN C C C GF G+ C+ CD
Sbjct: 516 CLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGILCDENID-NCDP 574
Query: 56 KCSNGGWCDS---QQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPG 106
+ G C C C GY G C + C+ CLN+G C C+C PG
Sbjct: 575 DPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPG 634
Query: 107 FQGLHCE 113
GL+CE
Sbjct: 635 TSGLNCE 641
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 37/120 (30%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSN 59
C C Y G C T + C P C VC P F+
Sbjct: 817 CHCMLPYTGKNCQTVLAPCSP-----NPCENAAVCKEAPNFESF---------------- 855
Query: 60 GGWCDSQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCE 113
C C G+QG C + C + C+NNG C VC CPPGF G+ CE
Sbjct: 856 --------SCLCAPGWQGKRCTVDVDECISKPCMNNGVCHNTQGSYVCECPPGFSGMDCE 907
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C + + C TC A C CP G GL C
Sbjct: 322 CVCVNGWSGDDCSENIDDCAYASCTPGSTCIDRVASFSCLCPEGKAGLLCHLDDA-CISN 380
Query: 56 KCSNGGWCDS-----QQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGL 110
C G CD+ Q +C CP+GY+G C + N+ C G C G
Sbjct: 381 PCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AF 438
Query: 111 HCE 113
HCE
Sbjct: 439 HCE 441
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 15/108 (13%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVCSCPPGFQGLHCEGGPGPGC 53
C CP+G C + + +CL+N G CT + C C G+ G++CE
Sbjct: 703 RCICPEGPHHPSCYSQV--NECLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDKNECL 760
Query: 54 DQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTC 95
C NGG C++ C C KG++G C + CLN GTC
Sbjct: 761 SNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTC 808
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 59/131 (45%), Gaps = 15/131 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
MC C GY GT+C T + P C N G C VC C PGF GL+CE
Sbjct: 389 MCDCQPGYTGTHCETDIDECARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNIDECAS 448
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPP 105
+ C NG C +C C GY G C T + CLN G CT +C+C
Sbjct: 449 RPCQNGAVCVDGVNGFVCTCSAGYTGVLCETDINECASMPCLNGGVCTDLVNGYICTCAA 508
Query: 106 GFQGLHCEGGT 116
GF+G +CE T
Sbjct: 509 GFEGTNCETDT 519
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
CQC GY G C T + C N G CT +C+C PGF G +CE
Sbjct: 770 CQCVAGYTGVICETDIDECASAPCQNGGVCTDTINGYICACVPGFTGSNCETNIDECASD 829
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPG 106
C NGG C +CQCP Y GTYC ++ C C N TC G VC C PG
Sbjct: 830 PCLNGGICVDGVNGFVCQCPPNYSGTYCEISLDACRSMPCQNGATCVNVGADYVCECVPG 889
Query: 107 FQGLHCE 113
+ G +CE
Sbjct: 890 YAGQNCE 896
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 1 MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
+C C G++GT C T FP C N TCT VC+C PG+ G+ CE
Sbjct: 503 ICTCAAGFEGTNCETDTDECASFP-CQNGATCTDQVNGYVCTCVPGYTGVLCETDINECA 561
Query: 54 DQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCP 104
C NGG C+ Q +C C + + C T CLN G C VC+C
Sbjct: 562 SFPCLNGGTCNDQVNGYVCVCAQDTSVSTCETDRDECASAPCLNGGACMDVVNGFVCTCL 621
Query: 105 PGFQGLHCEGGT 116
PG++G +CE T
Sbjct: 622 PGWEGTNCEINT 633
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY C + C N G C VC+C PG+ G +CE
Sbjct: 694 CVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVNGYVCNCAPGYTGDNCETEIDECASM 753
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPG 106
C NGG C CQC GY G C T + C N G CT +C+C PG
Sbjct: 754 PCLNGGACIEMVNGYTCQCVAGYTGVICETDIDECASAPCQNGGVCTDTINGYICACVPG 813
Query: 107 FQGLHCE 113
F G +CE
Sbjct: 814 FTGSNCE 820
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 52/128 (40%), Gaps = 15/128 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+C C GY G C T + CLN G C C C G+ G+ CE
Sbjct: 731 VCNCAPGYTGDNCETEIDECASMPCLNGGACIEMVNGYTCQCVAGYTGVICETDIDECAS 790
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPP 105
C NGG C +C C G+ G+ C T + CLN G C VC CPP
Sbjct: 791 APCQNGGVCTDTINGYICACVPGFTGSNCETNIDECASDPCLNGGICVDGVNGFVCQCPP 850
Query: 106 GFQGLHCE 113
+ G +CE
Sbjct: 851 NYSGTYCE 858
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+CQCP Y GTYC ++ C C N TC G VC C PG+ G +CE
Sbjct: 845 VCQCPPNYSGTYCEISLDACRSMPCQNGATCVNVGADYVCECVPGYAGQNCEIDINECAS 904
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYC 80
C NGG C + CQC GY G C
Sbjct: 905 LPCQNGGLCIDGIAGYTCQCRLGYIGVNC 933
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ G C + C N G C VC+C PGF G CE
Sbjct: 200 CTCPPGFTGRNCEIDIDECASDPCQNGGACVDGVNGYVCNCVPGFDGDECENNINECASS 259
Query: 56 KCSNGGWC-DSQQM--CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPGV----CSCPP 105
C NGG C D M C C G+ G C + C N G C G+ CSCP
Sbjct: 260 PCLNGGICVDGVNMFECTCLAGFTGVRCEVNIDECASAPCQNGGICI-DGINGYTCSCPL 318
Query: 106 GFQGLHCE 113
GF G +CE
Sbjct: 319 GFSGDNCE 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 22 CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGY 75
CLN G C VC+C PG++G +CE C NGG C Q +C C G+
Sbjct: 603 CLNGGACMDVVNGFVCTCLPGWEGTNCEINTDECASSPCMNGGLCVDQVNSYVCFCLPGF 662
Query: 76 QGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCE 113
G +CGT + CLN G C C C G+ + C+
Sbjct: 663 TGIHCGTEIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQ 706
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGCD 54
C C G+ G C + C N G C G+ CSCP GF G +CE
Sbjct: 276 CTCLAGFTGVRCEVNIDECASAPCQNGGICI-DGINGYTCSCPLGFSGDNCENNDDECSS 334
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPGV----CSCP 104
C NGG C + MC C G+ G C + C N G C GV C C
Sbjct: 335 IPCLNGGTCVDLVNAYMCVCAPGWTGPTCADNIDECASAPCQNGGVCI-DGVNGYMCDCQ 393
Query: 105 PGFQGLHCE 113
PG+ G HCE
Sbjct: 394 PGYTGTHCE 402
>sp|Q9UQP3|TENN_HUMAN Tenascin-N OS=Homo sapiens GN=TNN PE=1 SV=2
Length = 1299
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C +G +G C C C +G C G C C + G C P C + CS G
Sbjct: 155 CHCEEGREGPACERLACPGACSGHGRCV-DGRCLCHEPYVGADCG---YPACPENCSGHG 210
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C + +CQC + + C C C +G C G C C GF GL C
Sbjct: 211 EC-VRGVCQCHEDFMSEDCSEKRCPGDCSGHGFCDT-GECYCEEGFTGLDC 259
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 21 QCLNNGTCTAPGVCSCPPGFQGLHCEGG-PGPGCDQ-----KCSNGGWCDSQQMCQCPKG 74
C +GT + CSC HCE G GP C++ CS G C + C C +
Sbjct: 141 HCSGHGTFSLE-TCSC-------HCEEGREGPACERLACPGACSGHGRCVDGR-CLCHEP 191
Query: 75 YQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
Y G CG C C +G C GVC C F C
Sbjct: 192 YVGADCGYPACPENCSGHGECVR-GVCQCHEDFMSEDC 228
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 45
+CQC + + C C C +G C G C C GF GL C
Sbjct: 216 VCQCHEDFMSEDCSEKRCPGDCSGHGFCDT-GECYCEEGFTGLDC 259
>sp|Q05546|TENR_RAT Tenascin-R OS=Rattus norvegicus GN=Tnr PE=1 SV=1
Length = 1356
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C Y G C C C + G C G C C + G C PG CS G
Sbjct: 219 CICDSEYSGDDCSELRCPTDCSSRGLCV-DGECVCEEPYTGEDCRELRCPG---DCSGKG 274
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
C + C C +GY G C C C G C G+C C G+QG C T
Sbjct: 275 QC-ANGTCLCQEGYAGEDCSQRRCLNACSGRGHCQE-GLCICEEGYQGPDCSAVT 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C +G+ G C C C + G C G C C + G C C CS+ G
Sbjct: 188 CICNEGWFGKNCSEPYCPLGCSSRGVCV-DGQCICDSEYSGDDCS---ELRCPTDCSSRG 243
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C + C C + Y G C C C G C A G C C G+ G C
Sbjct: 244 LCVDGE-CVCEEPYTGEDCRELRCPGDCSGKGQC-ANGTCLCQEGYAGEDC 292
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGP 51
C C +GY G C C C G C G+C C G+QG C P
Sbjct: 281 CLCQEGYAGEDCSQRRCLNACSGRGHCQE-GLCICEEGYQGPDCSAVTPP 329
>sp|Q8BYI9|TENR_MOUSE Tenascin-R OS=Mus musculus GN=Tnr PE=1 SV=2
Length = 1358
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C Y G C C C + G C G C C + G C PG CS G
Sbjct: 219 CICDSEYSGDDCSELRCPTDCSSRGLCV-DGECVCEEPYTGEDCRELRCPG---DCSGKG 274
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C + C C +GY G C C C G C G+C C G+QG C
Sbjct: 275 QC-ANGTCLCQEGYAGEDCSQRRCLNACSGRGHCQE-GLCICEEGYQGPDC 323
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C C +G+ G C C C + G C G C C + G C C CS+ G
Sbjct: 188 CICNEGWFGKNCSEPYCPLGCSSRGVCV-DGQCICDSEYSGDDCS---ELRCPTDCSSRG 243
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C + C C + Y G C C C G C A G C C G+ G C
Sbjct: 244 LCVDGE-CVCEEPYTGEDCRELRCPGDCSGKGQC-ANGTCLCQEGYAGEDC 292
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGP 51
C C +GY G C C C G C G+C C G+QG C P
Sbjct: 281 CLCQEGYAGEDCSQRRCLNACSGRGHCQE-GLCICEEGYQGPDCSAVAPP 329
>sp|P35556|FBN2_HUMAN Fibrillin-2 OS=Homo sapiens GN=FBN2 PE=1 SV=3
Length = 2912
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+C G C C +C NGG C + C
Sbjct: 107 GNQCIVPICRNSC-GDGFCSRPNMCTCSSGQISSTCGSKSIQQCSVRCMNGGTC-ADDHC 164
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
QC KGY GTYCG +C C N G C P C+C GF G CE
Sbjct: 165 QCQKGYIGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTGPQCE 208
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 26/45 (57%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
CQC KGY GTYCG +C C N G C P C+C GF G CE
Sbjct: 164 CQCQKGYIGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTGPQCE 208
>sp|Q61555|FBN2_MOUSE Fibrillin-2 OS=Mus musculus GN=Fbn2 PE=1 SV=2
Length = 2907
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 10 GTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMC 69
G C +C C +G C+ P +C+C G C C +C NGG C + C
Sbjct: 107 GNQCIVPICRNSC-GDGFCSRPNMCTCSSGQISPTCGAKSIQQCSVRCMNGGTC-ADDHC 164
Query: 70 QCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
QC KGY GTYCG +C C N G C P C+C GF G CE
Sbjct: 165 QCQKGYIGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTGPQCE 208
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 26/45 (57%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
CQC KGY GTYCG +C C N G C P C+C GF G CE
Sbjct: 164 CQCQKGYIGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTGPQCE 208
>sp|P10041|DL_DROME Neurogenic locus protein delta OS=Drosophila melanogaster GN=Dl
PE=1 SV=2
Length = 833
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCS 58
C+CP GY G C + C P C+N G+C G C CP GF G CE +C
Sbjct: 404 CECPIGYSGPNCDLQLDNCSPNPCINGGSCQPSGKCICPAGFSGTRCETNIDDCLGHQCE 463
Query: 59 NGGWCD---SQQMCQCPKGYQGTYCGTA--MCFPQ-CLNNGTCTAPG---VCSCPPGFQG 109
NGG C +Q CQC G+ GT+C + +C + C N GTC C+C GF G
Sbjct: 464 NGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNNDYQCTCRAGFTG 523
Query: 110 LHC 112
C
Sbjct: 524 KDC 526
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 8/111 (7%)
Query: 4 CPKGYQGTYCGTAMCFPQ--CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG 61
C Y G+ C C P+ + TC+ G C G+QG +C P C + C +G
Sbjct: 184 CDLNYYGSGCA-KFCRPRDDSFGHSTCSETGEIICLTGWQGDYCHI---PKCAKGCEHGH 239
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
CD C C G++G C + P C+ +GTC P C C G+ GL+C
Sbjct: 240 -CDKPNQCVCQLGWKGALCNECVLEPNCI-HGTCNKPWTCICNEGWGGLYC 288
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CF-PQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ GT C T + C QC N GTC C C PGF G HC +
Sbjct: 439 CICPAGFSGTRCETNIDDCLGHQCENGGTCIDMVNQYRCQCVPGFHGTHCSSKVDLCLIR 498
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPG 106
C+NGG C ++ C C G+ G C + C N GTC C C G
Sbjct: 499 PCANGGTCLNLNNDYQCTCRAGFTGKDCSVDIDECSSGPCHNGGTCMNRVNSFECVCANG 558
Query: 107 FQGLHCE 113
F+G C+
Sbjct: 559 FRGKQCD 565
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQK-CSNG 60
C C G++G C + P C+ +GTC P C C G+ GL+C + + C NG
Sbjct: 246 CVCQLGWKGALCNECVLEPNCI-HGTCNKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNG 304
Query: 61 GWC----DSQQMCQCPKGYQGTYCGTAMC-----FPQCLNNGTC-----TAPGV-CSCPP 105
G C + C+C GY G C + C N GTC T G C C
Sbjct: 305 GTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCAN 364
Query: 106 GFQGLHCE 113
G+ G CE
Sbjct: 365 GWSGKMCE 372
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 56/136 (41%), Gaps = 25/136 (18%)
Query: 2 CQCPKGYQGTYCGTAMC-----FPQCLNNGTC-----TAPGV-CSCPPGFQGLHCEGGPG 50
C+C GY G C + C N GTC T G C C G+ G CE
Sbjct: 317 CKCAPGYSGDDCENEIYSCDADVNPCQNGGTCIDEPHTKTGYKCHCANGWSGKMCEEKVL 376
Query: 51 PGCDQKCSNGGWCDSQQ----------MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA 97
D+ C + G C + + C+CP GY G C + C P C+N G+C
Sbjct: 377 TCSDKPC-HQGICRNVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNCSPNPCINGGSCQP 435
Query: 98 PGVCSCPPGFQGLHCE 113
G C CP GF G CE
Sbjct: 436 SGKCICPAGFSGTRCE 451
>sp|Q16YE7|CUE_AEDAE Protein cueball OS=Aedes aegypti GN=cue PE=3 SV=1
Length = 664
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTC----TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
MC+C ++G C +C CLNNG C T C+C F G CE C
Sbjct: 389 MCKCHAEFEGERCDRNICDGYCLNNGRCALSATGQRSCTCSKNFSGARCETAI---CTSD 445
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTC-----TAPGVCSCPPGFQ 108
G C + C+C GY+G C C CL++GTC T C C +
Sbjct: 446 YCYNGECFVENEVPECKCNVGYRGDRCEEYTCNNYCLHDGTCILNNDTMLVECRCGSEYT 505
Query: 109 GLHCE 113
G CE
Sbjct: 506 GKRCE 510
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKC 57
C C YQGT+C +C C+ +G C +C C F+G C+ CD C
Sbjct: 355 CICLPEYQGTFCEIPICNNFCV-HGECVVGADSRPMCKCHAEFEGERCDRNI---CDGYC 410
Query: 58 SNGGWC----DSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPG---VCSCPPGFQGL 110
N G C Q+ C C K + G C TA+C NG C C C G++G
Sbjct: 411 LNNGRCALSATGQRSCTCSKNFSGARCETAICTSDYCYNGECFVENEVPECKCNVGYRGD 470
Query: 111 HCE 113
CE
Sbjct: 471 RCE 473
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 11/100 (11%)
Query: 22 CLNNGTCT-APGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGW---CDSQQMCQCPKGYQG 77
CLN G C C P +QG CE P C+ C +G DS+ MC+C ++G
Sbjct: 342 CLNKGILNHNTNSCICLPEYQGTFCEI---PICNNFCVHGECVVGADSRPMCKCHAEFEG 398
Query: 78 TYCGTAMCFPQCLNNGTC----TAPGVCSCPPGFQGLHCE 113
C +C CLNNG C T C+C F G CE
Sbjct: 399 ERCDRNICDGYCLNNGRCALSATGQRSCTCSKNFSGARCE 438
>sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN=crb PE=1 SV=3
Length = 2146
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G++G CGT + +CLNNGTC A C C PGF+G HCE DQ
Sbjct: 1780 CTCQPGFEGDDCGTDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQ 1839
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCT--------APGV 100
C NGG C + +C CP+ Y G C C N TC
Sbjct: 1840 PCHNGGNCTDLIASYVCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFT 1899
Query: 101 CSCPPGFQGLHCE 113
C+C PGF+G C+
Sbjct: 1900 CTCVPGFEGPLCD 1912
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 51/128 (39%), Gaps = 16/128 (12%)
Query: 2 CQCPKGYQGTYCGTAM----CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C+C +G+ G CG + P+ NG C C C PGF G+HC+
Sbjct: 632 CKCTRGWTGRTCGNDVDECTLHPKICGNGICKNEKGSYKCYCTPGFTGVHCDSDVDECLS 691
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAMC---FPQCLNNGTCTAP---GVCSCPP 105
C NG C ++ C C GY+G C + C N TC C+C P
Sbjct: 692 FPCLNGATCHNKINAYECVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIP 751
Query: 106 GFQGLHCE 113
G G C+
Sbjct: 752 GMTGRICD 759
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 22 CLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCDQK-CSNGGWCDSQQM----CQCPK 73
C+ +GTC++ C C + G +C+ G C + C NGG C C C
Sbjct: 274 CMGHGTCSSSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSCLENSRGDYQCFCDP 333
Query: 74 GYQGTYCGTAMCFPQ------CLNNGTCTAPG-----VCSCPPGFQGLHCEGGT 116
+ G +C T + CLNNG C G C CP G+ G CE T
Sbjct: 334 NHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDT 387
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 44/112 (39%), Gaps = 18/112 (16%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ------CLNNGTCTAPG-----VCSCPPGFQGLHCEGGPG 50
C C + G +C T + CLNNG C G C CP G+ G CE
Sbjct: 329 CFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTD 388
Query: 51 PGCDQKCSNGGWCDSQQ---MCQCP-KGYQGTYCGTAM--CFPQ-CLNNGTC 95
Q C N G C + C C GY G +C T + C CLN G C
Sbjct: 389 ECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRC 440
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 37/101 (36%), Gaps = 20/101 (19%)
Query: 33 VCSCPPGFQGLHCEGGPGPGCDQK--CSNGGWCD--SQQMCQCPKGYQGTYCGTAM---- 84
C C PGF+G HCE CD+ C G D C C Y G C +
Sbjct: 925 TCECEPGFEGTHCEINIDE-CDRYNPCQRGTCYDQIDDYDCDCDANYGGKNCSVLLKGCD 983
Query: 85 ---------CFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGT 116
C P +N T C+C GFQG CE T
Sbjct: 984 QNPCLNGGACLPYLINE--VTHLYNCTCENGFQGDKCEKTT 1022
Score = 32.7 bits (73), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 60/163 (36%), Gaps = 49/163 (30%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTAPG---VCSCP-PGFQGLHCEGGPGPGCD 54
C+CPKGY G C T C Q C NNG+C C C G+ G C+ CD
Sbjct: 372 CECPKGYAGARCEVDTDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDE-CD 430
Query: 55 QK-CSNGGWCDSQQ---MCQCPKGYQGTYCGTAMC--FPQCLNNGTC------------- 95
+ C NGG C CQC G+ G C M QCLN GTC
Sbjct: 431 KNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGTCLDKPIGFQCLCPP 490
Query: 96 --------TAP--------------GVCSCPPGFQGLHCEGGT 116
AP G C C PG G +C+ T
Sbjct: 491 EYTGELCQIAPSCAQQCPIDSECVGGKCVCKPGSSGYNCQTST 533
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 16/97 (16%)
Query: 2 CQCPKGYQGTYCGTA-MCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQ----- 55
C CP Y G C A C QC + C G C C PG G +C+ G G
Sbjct: 486 CLCPPEYTGELCQIAPSCAQQCPIDSECVG-GKCVCKPGSSGYNCQTSTGDGASALALTP 544
Query: 56 --------KCSNGGWCDSQ-QMCQCPKGYQGTYCGTA 83
KC NGG C C C GY G C A
Sbjct: 545 INCNATNGKCLNGGTCSMNGTHCYCAVGYSGDRCEKA 581
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 26/139 (18%)
Query: 1 MCQCPKGYQGTYCGTAMCF----PQCLNNGTCT--------APGVCSCPPGFQGLHCEGG 48
+C CP+ Y G C C N TC C+C PGF+G C+
Sbjct: 1855 VCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCD-- 1912
Query: 49 PGPGCDQK-CSNGGWCDSQ---QMCQCPKGYQGTYCGTAMCFPQ---CLNNGTC-TAPGV 100
P C+ C NGG C + MC+C GY G C + + C N G C G
Sbjct: 1913 -IPFCEITPCDNGGLCLTTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLVGR 1971
Query: 101 CSCP---PGFQGLHCEGGT 116
C GF+G+ CE
Sbjct: 1972 YECDCQGTGFEGIRCENDI 1990
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1
PE=1 SV=3
Length = 2531
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G+YC + C P C N TCT C C G+ G +C Q
Sbjct: 1131 CHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQ 1190
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGT-----------AMCFPQCLNNGTCTAPG-- 99
C NGG C + C CP+G QG +C A P+C NNGTC
Sbjct: 1191 PCQNGGTCIDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGG 1250
Query: 100 -VCSCPPGFQGLHCEGGT 116
C+CPPGF G CEG
Sbjct: 1251 YTCTCPPGFVGERCEGDV 1268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 2 CQCPKGYQGTYCGT-----------AMCFPQCLNNGTCTAPG---VCSCPPGFQGLHCEG 47
C CP+G QG +C A P+C NNGTC C+CPPGF G CEG
Sbjct: 1207 CSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFVGERCEG 1266
Query: 48 GPGPGCDQKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---- 95
C G + Q C+C G+ G C + + C + C N G C
Sbjct: 1267 DVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGGVCAVAS 1326
Query: 96 -TAPG-VCSCPPGFQGLHCEG 114
TA G +C CP GF+G CE
Sbjct: 1327 NTARGFICRCPAGFEGATCEN 1347
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNN--------GTCTAPGVCSCPPGFQGLHCEGGPGPG 52
C C G+QG +C + +C +N C C+CP GF G+HCE
Sbjct: 930 FCDCLPGFQGAFCEEDI--NECASNPCQNGANCTDCVDSYTCTCPVGFNGIHCENNTPDC 987
Query: 53 CDQKCSNGGWC---DSQQMCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTAP---GVCSC 103
+ C NGG C + C CP G+ G+YC C + CL+ GTC C+C
Sbjct: 988 TESSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTC 1047
Query: 104 PPGFQGLHCEG 114
P G+ GL+C+
Sbjct: 1048 PQGYTGLNCQN 1058
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY+G YC T C CL+NG C C CP GF G C+
Sbjct: 476 CICMPGYEGVYCEINTDECASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQYDVDECAST 535
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGF 107
C NG C + C C +GY GT+C + C P + G+C A C C PG+
Sbjct: 536 PCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGY 595
Query: 108 QGLHCE 113
G HCE
Sbjct: 596 TGHHCE 601
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C C +GY GT+C + C P + G+C A C C PG+ G HCE Q
Sbjct: 552 CVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCQPGYTGHHCETNINECHSQP 611
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQ 108
C +GG C D+ +C C KG G C + C ++GTC C+C PG+
Sbjct: 612 CRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYT 671
Query: 109 GLHC 112
G C
Sbjct: 672 GSMC 675
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 19/132 (14%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+QG C + C + +C C C G+ G +CE
Sbjct: 855 CVCPTGWQGQTCEVDINECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPN 914
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQCLNN--------GTCTAPGVCSCP 104
C NGG C + C C G+QG +C + +C +N C C+CP
Sbjct: 915 PCHNGGSCTDGINTAFCDCLPGFQGAFCEEDI--NECASNPCQNGANCTDCVDSYTCTCP 972
Query: 105 PGFQGLHCEGGT 116
GF G+HCE T
Sbjct: 973 VGFNGIHCENNT 984
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
CQC +GY G C + C C N+ TC C C PG++G++CE
Sbjct: 438 CQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASS 497
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C + G C ++ CQCPKG+ G C + C N C C C G
Sbjct: 498 PCLHNGHCMDKINEFQCQCPKGFNGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEG 557
Query: 107 FQGLHCE 113
+ G HCE
Sbjct: 558 YTGTHCE 564
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 22 CLNNGTC-------TAPGVCSCPPGFQGLHCEGGPGPGCDQK-CSNGGWCD----SQQMC 69
C N GTC T CSCP GF G C C C NGG CD ++ C
Sbjct: 68 CKNAGTCHVVDHGGTVDYACSCPLGFSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKC 127
Query: 70 QCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCE 113
+CP G+ G C A C N G C + +C CPPGF G C
Sbjct: 128 RCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICRCPPGFHGPTCR 176
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+CP G+ G C A C N G C + +C CPPGF G C C Q
Sbjct: 127 CRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICRCPPGFHGPTCRQDVNE-CSQN 185
Query: 57 ---CSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSC 103
C +GG C ++ C C + G +C C P C N GTC G C+C
Sbjct: 186 PGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTTHECAC 245
Query: 104 PPGFQGLHCE 113
PGF G +CE
Sbjct: 246 LPGFAGQNCE 255
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTA--MCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GT C C C+N GTC T+ VC+C GF G +C+
Sbjct: 739 CDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASN 798
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG-----VCSCP 104
C N G C C CP Y G C + C N+G C C CP
Sbjct: 799 PCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKNSGVCKESEDYESFSCVCP 858
Query: 105 PGFQGLHCE 113
G+QG CE
Sbjct: 859 TGWQGQTCE 867
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
+C C +G+ G C T + CLN GTC A C+CP + G CE P
Sbjct: 776 VCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCAT 835
Query: 55 QKCSNGGWCDSQQ-----MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSC 103
C N G C + C CP G+QG C + C + +C C C
Sbjct: 836 SPCKNSGVCKESEDYESFSCVCPTGWQGQTCEVDINECVKSPCRHGASCQNTNGSYRCLC 895
Query: 104 PPGFQGLHCEGGT 116
G+ G +CE
Sbjct: 896 QAGYTGRNCESDI 908
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-----TAPG-VCSCPPGFQGLHCEGGPGPG 52
C+C G+ G C + + C + C N G C TA G +C CP GF+G CE
Sbjct: 1293 CECRAGHTGRRCESVINGCRGKPCKNGGVCAVASNTARGFICRCPAGFEGATCENDARTC 1352
Query: 53 CDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFP-----QCLNNGTCTAPG----- 99
+C NGG C S C C + G C P C N GTC
Sbjct: 1353 GSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCYNQGTCEPTSENPFY 1412
Query: 100 VCSCPPGFQGLHCE 113
C CP F GL C
Sbjct: 1413 RCLCPAKFNGLLCH 1426
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGT-----AMCFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPG 52
+C CP GY G C A+ C + G C C C G+ G CE
Sbjct: 397 ICTCPSGYTGPACSQDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNEC 456
Query: 53 CDQKCSNGGWCDSQQ---MCQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSC 103
C N C Q C C GY+G YC T C CL+NG C C C
Sbjct: 457 ISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGHCMDKINEFQCQC 516
Query: 104 PPGFQGLHCE 113
P GF G C+
Sbjct: 517 PKGFNGHLCQ 526
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 34/141 (24%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQCLNNGT------CTAPGVCSCPPGFQGLHCEGGPGPGCD 54
C+CP G G C C N G+ +C+CP G+ G P C
Sbjct: 359 CECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTG--------PACS 410
Query: 55 QK----------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC--- 95
Q C + G C + CQC +GY G C + C C N+ TC
Sbjct: 411 QDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQ 470
Query: 96 TAPGVCSCPPGFQGLHCEGGT 116
C C PG++G++CE T
Sbjct: 471 IGEFQCICMPGYEGVYCEINT 491
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 22 CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC---DSQQMCQCPKG 74
C N GTC G C+C PGF G +CE C NGG C + C+CP
Sbjct: 227 CQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPE 286
Query: 75 YQGTYC 80
+ G YC
Sbjct: 287 WTGQYC 292
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4
PE=1 SV=2
Length = 2003
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 22 CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGY 75
C N G C G C CPPGFQG C+ P + C NG C +Q +CQC GY
Sbjct: 901 CHNGGLCVDSGPSYFCHCPPGFQGSLCQDHVNPCESRPCQNGATCMAQPSGYLCQCAPGY 960
Query: 76 QGTYCGTAM--CFPQ-CLNNGTCT-APG--VCSCPPGFQGLHCEGGT 116
G C + C Q C N+GTCT PG C+CPPGF GL CEG
Sbjct: 961 DGQNCSKELDACQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDV 1007
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCT-APG--VCSCPPGFQGLHCEGGPGPGCD 54
+CQC GY G C + C Q C N+GTCT PG C+CPPGF GL CEG D
Sbjct: 953 LCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLD 1012
Query: 55 QKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG------V 100
Q C G + CQC G+ G +C + C Q C + GTC A +
Sbjct: 1013 QPCHPTGTAACHSLANAFYCQCLPGHTGQWCEVEIDPCHSQPCFHGGTCEATAGSPLGFI 1072
Query: 101 CSCPPGFQGLHC 112
C CP GF+G C
Sbjct: 1073 CHCPKGFEGPTC 1084
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 54/134 (40%), Gaps = 22/134 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-------TAPGVCSCPPGFQGLHCEGGPGP 51
C CP G +G C C P+ C N GTC + +C CPPGF G CE P
Sbjct: 220 CLCPVGQEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPGFIGPDCEVNPDN 279
Query: 52 GCDQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCF------PQCLNNGTCTAPG--- 99
+C NGG C C CP+ + G C + P C N GTC
Sbjct: 280 CVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECETQGPPHCRNGGTCQNSAGSF 339
Query: 100 VCSCPPGFQGLHCE 113
C C G+ G CE
Sbjct: 340 HCVCVSGWGGTSCE 353
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 51/115 (44%), Gaps = 28/115 (24%)
Query: 22 CLNNGTCTA--PGV-CSCPPGFQGLHCEG-------GPGPGCDQKCSNGGWCDSQQ---M 68
C+N G C A P + C CPPGF+G CE PGP C G C +
Sbjct: 165 CVNGGVCLATYPQIQCHCPPGFEGHACERDVNECFQDPGP-----CPKGTSCHNTLGSFQ 219
Query: 69 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-------TAPGVCSCPPGFQGLHCE 113
C CP G +G C C P+ C N GTC + +C CPPGF G CE
Sbjct: 220 CLCPVGQEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPGFIGPDCE 274
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCT-APG--VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP GY G C M CLN G+C +PG C+CPP G C+
Sbjct: 715 CTCPTGYTGPTCSEEMTACHSGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSA 774
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM----CFPQCLNNGTCTAP---GVCSCPP 105
C NGG C ++ C C G+QG C + C N TC C CP
Sbjct: 775 PCFNGGTCVNRPGTFSCLCAMGFQGPRCEGKLRPSCADSPCRNRATCQDSPQGPRCLCPT 834
Query: 106 GFQGLHCE 113
G+ G C+
Sbjct: 835 GYTGGSCQ 842
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 34 CSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM---CQCPKGYQGTYCGTAMCFPQ-- 88
C C G+ G CE G C++GG C Q C CP GY G C M
Sbjct: 677 CVCDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCTCPTGYTGPTCSEEMTACHSG 736
Query: 89 -CLNNGTCT-APG--VCSCPPGFQGLHCEGGT 116
CLN G+C +PG C+CPP G C+ T
Sbjct: 737 PCLNGGSCNPSPGGYYCTCPPSHTGPQCQTST 768
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 49/127 (38%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCT---APGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP GY G+ C C Q C TC A C CPPG +G CE
Sbjct: 461 CLCPPGYTGSRCEADHNECLSQPCHPGSTCLDLLATFHCLCPPGLEGQLCEVETNECASA 520
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTC-TAPGV--CSCPPG 106
C N C C C G+ GT C + C N G C PG C C PG
Sbjct: 521 PCLNHADCHDLLNGFQCICLPGFSGTRCEEDIDECRSSPCANGGQCQDQPGAFHCKCLPG 580
Query: 107 FQGLHCE 113
F+G C+
Sbjct: 581 FEGPRCQ 587
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 34 CSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAMCF---P 87
C+CP G+ G C C NGG C+ C CP + G C T+ +
Sbjct: 715 CTCPTGYTGPTCSEEMTACHSGPCLNGGSCNPSPGGYYCTCPPSHTGPQCQTSTDYCVSA 774
Query: 88 QCLNNGTCT-APGV--CSCPPGFQGLHCEG 114
C N GTC PG C C GFQG CEG
Sbjct: 775 PCFNGGTCVNRPGTFSCLCAMGFQGPRCEG 804
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC-TAPGV--CSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GT C + C N G C PG C C PGF+G C+
Sbjct: 537 CICLPGFSGTRCEEDIDECRSSPCANGGQCQDQPGAFHCKCLPGFEGPRCQTEVDECLSD 596
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQ 88
C G C C CP G+ G C +C P
Sbjct: 597 PCPVGASCLDLPGAFFCLCPSGFTGQLCEVPLCAPN 632
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G+YC + C P C N TCT C C G+ G +C Q
Sbjct: 1131 CHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQ 1190
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGT-----------AMCFPQCLNNGTCTAPG-- 99
C NGG C + C CP+G QG +C A P+C NNGTC
Sbjct: 1191 PCQNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGG 1250
Query: 100 -VCSCPPGFQGLHCEGGT 116
C+CPPGF G CEG
Sbjct: 1251 YTCTCPPGFVGERCEGDV 1268
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
C C G+QG +C + C N CT C+CP GF G+HCE +
Sbjct: 930 FCDCLPGFQGAFCEEDINECATNPCQNGANCTDCVDSYTCTCPTGFNGIHCENNTPDCTE 989
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTAP---GVCSCPP 105
C NGG C + C CP G+ G+YC C + CL+ GTC C+CP
Sbjct: 990 SSCFNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTCPQ 1049
Query: 106 GFQGLHCEG 114
G+ GL+C+
Sbjct: 1050 GYTGLNCQN 1058
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 2 CQCPKGYQGTYCGT-----------AMCFPQCLNNGTCTAPG---VCSCPPGFQGLHCEG 47
C CP+G QG +C A P+C NNGTC C+CPPGF G CEG
Sbjct: 1207 CSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVGGYTCTCPPGFVGERCEG 1266
Query: 48 GPGPGCDQKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---- 95
C G + Q C+C G+ G C + + C + C N G C
Sbjct: 1267 DVNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCRNGGVCAVAS 1326
Query: 96 -TAPG-VCSCPPGFQGLHCEG 114
TA G +C CP F+G CE
Sbjct: 1327 NTARGFICRCPARFEGATCEN 1347
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 52/130 (40%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+QG C + C + +C C C G+ G +CE
Sbjct: 855 CVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPN 914
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C C G+QG +C + C N CT C+CP G
Sbjct: 915 PCHNGGSCTDGVNAAFCDCLPGFQGAFCEEDINECATNPCQNGANCTDCVDSYTCTCPTG 974
Query: 107 FQGLHCEGGT 116
F G+HCE T
Sbjct: 975 FNGIHCENNT 984
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 55/124 (44%), Gaps = 13/124 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C C +GY GT+C + C P + G C A C C PG+ G HCE Q
Sbjct: 552 CVCTEGYTGTHCEVDIDECDPDPCHIGLCKDGVATFTCLCQPGYTGHHCETNINECHSQP 611
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQ 108
C +GG C D+ +C C KG G C + C ++GTC C+C PG+
Sbjct: 612 CRHGGTCQDRDNYYLCLCLKGTTGPNCEINLDDCASNPCDSGTCLDKIDGYECACEPGYT 671
Query: 109 GLHC 112
G C
Sbjct: 672 GSMC 675
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
CQC +GY G C + C C N+ TC C C PG++G++CE
Sbjct: 438 CQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASS 497
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C + G C ++ +CQCPKG+ G C + C N C C C G
Sbjct: 498 PCLHNGRCVDKINEFLCQCPKGFSGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEG 557
Query: 107 FQGLHCE 113
+ G HCE
Sbjct: 558 YTGTHCE 564
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 51/130 (39%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGT-----AMCFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPG 52
+C CP+GY G C A+ C + G C C C G+ G CE
Sbjct: 397 ICTCPRGYTGPACSQDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNEC 456
Query: 53 CDQKCSNGGWCDSQQ---MCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTAPG---VCSC 103
C N C Q C C GY+G YC T C CL+NG C +C C
Sbjct: 457 ISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGRCVDKINEFLCQC 516
Query: 104 PPGFQGLHCE 113
P GF G C+
Sbjct: 517 PKGFSGHLCQ 526
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQ-CLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGC 53
C CP G+ G C T + C C N GTC + C CPPG+ G C+ P
Sbjct: 87 CSCPLGFSGPLCLTPLANACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQA-DPCA 145
Query: 54 DQKCSNGGWC---DSQQMCQCPKGYQGTYC 80
C+NGG C +S +C CP G+ G C
Sbjct: 146 SNPCANGGQCLPFESSYICGCPPGFHGPTC 175
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+CP G+ G C A C N G C + +C CPPGF G C C Q
Sbjct: 127 CRCPPGWSGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVNE-CSQN 185
Query: 57 ---CSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSC 103
C +GG C ++ C C + G +C C P C N GTC G C+C
Sbjct: 186 PGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPCSPSPCQNGGTCRPTGDTTHECAC 245
Query: 104 PPGFQGLHCE 113
PGF G +CE
Sbjct: 246 LPGFAGQNCE 255
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTA--MCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GT C C C+N GTC T+ VC+C GF G +C+
Sbjct: 739 CDCAPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASN 798
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG-----VCSCP 104
C N G C C CP Y G C + C N+G C C CP
Sbjct: 799 PCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCATSPCKNSGVCKESEDYESFSCVCP 858
Query: 105 PGFQGLHCE 113
G+QG CE
Sbjct: 859 TGWQGQTCE 867
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 52/133 (39%), Gaps = 17/133 (12%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
+C C +G+ G C T + CLN GTC A C+CP + G CE P
Sbjct: 776 VCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCAT 835
Query: 55 QKCSNGGWCDSQQ-----MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSC 103
C N G C + C CP G+QG C + C + +C C C
Sbjct: 836 SPCKNSGVCKESEDYESFSCVCPTGWQGQTCEIDINECVKSPCRHGASCQNTNGSYRCLC 895
Query: 104 PPGFQGLHCEGGT 116
G+ G +CE
Sbjct: 896 QAGYTGRNCESDI 908
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 2 CQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV---CSCPPGFQGLHCE--------G 47
C CP+GY G C + + C N G C C C G+ G +C+
Sbjct: 1045 CTCPQGYTGLNCQNLVRWCDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVA 1104
Query: 48 GPGPGCDQK--CSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAP- 98
G D C +GG C + + C C GY G+YC + C P C N TCT
Sbjct: 1105 AQKRGIDVTLLCQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYL 1164
Query: 99 --GVCSCPPGFQGLHC 112
C C G+ G +C
Sbjct: 1165 GGFSCKCVAGYHGSNC 1180
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 52/134 (38%), Gaps = 22/134 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-----TAPG-VCSCPPGFQGLHCEGGPGPG 52
C+C G+ G C + + C + C N G C TA G +C CP F+G CE
Sbjct: 1293 CECRAGHTGRRCESVINGCRGKPCRNGGVCAVASNTARGFICRCPARFEGATCENDARTC 1352
Query: 53 CDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFP-----QCLNNGTCTAPG----- 99
+C NGG C S C C + G C P C N GTC
Sbjct: 1353 GSLRCLNGGTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCYNQGTCEPTSESPFY 1412
Query: 100 VCSCPPGFQGLHCE 113
C CP F GL C
Sbjct: 1413 RCLCPAKFNGLLCH 1426
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 44/118 (37%), Gaps = 34/118 (28%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNG 60
+CQCPKG+ G C + C+ P G C GP
Sbjct: 513 LCQCPKGFSGHLCQYDV--------------DECASTPCKNGAKCLDGP----------- 547
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCE 113
+ C C +GY GT+C + C P + G C A C C PG+ G HCE
Sbjct: 548 ----NTYTCVCTEGYTGTHCEVDIDECDPDPCHIGLCKDGVATFTCLCQPGYTGHHCE 601
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 34/141 (24%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQCLNNGT------CTAPGVCSCPPGFQGLHCEGGPGPGCD 54
C+CP G G C C N G+ +C+CP G+ G P C
Sbjct: 359 CECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPRGYTG--------PACS 410
Query: 55 QK----------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC--- 95
Q C + G C + CQC +GY G C + C C N+ TC
Sbjct: 411 QDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQ 470
Query: 96 TAPGVCSCPPGFQGLHCEGGT 116
C C PG++G++CE T
Sbjct: 471 IGEFQCICMPGYEGVYCEINT 491
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 22 CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC---DSQQMCQCPKG 74
C N GTC G C+C PGF G +CE C NGG C + C+CP
Sbjct: 227 CQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPGNNCKNGGACVDGVNTYNCRCPPE 286
Query: 75 YQGTYCGTAM----CFPQ-CLNNGTC 95
+ G YC + P C N GTC
Sbjct: 287 WTGQYCTEDVDECQLMPNACQNAGTC 312
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus
GN=Notch2 PE=1 SV=1
Length = 2471
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+QG C + C + C+NNG C +C CPPGF G+ CE
Sbjct: 859 CLCAPGWQGQRCTVDVDECVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLAN 918
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPG 106
C NGG C + C C G+ G C T M C + C N GTC+ C+CP G
Sbjct: 919 PCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAG 978
Query: 107 FQGLHCEGGT 116
F G+HCE
Sbjct: 979 FHGVHCENNI 988
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 2 CQCPKGYQGTYCGTAMC----FPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C CP G +G C + P CLN G C C C PGF G CEG
Sbjct: 1211 CSCPPGTRGLLCEENIDDCAGAPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLS 1270
Query: 55 QKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------V 100
CS+ G D Q+ C C + G +C T + PQ CLN GTC +
Sbjct: 1271 NPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNVPDGFI 1330
Query: 101 CSCPPGFQGLHCEGG 115
C CPPGF G C+
Sbjct: 1331 CRCPPGFSGARCQSS 1345
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN-----GTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
CQCP GY G+YC + +C +N TC+ C C PG+QG++CE
Sbjct: 1135 CQCPLGYTGSYCEEQL--DECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQ 1192
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMC----FPQCLNNGTCTAPG---VCSC 103
+Q C NGG C + C CP G +G C + P CLN G C C C
Sbjct: 1193 NQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQCVDRIGGYSCRC 1252
Query: 104 PPGFQGLHCEGGT 116
PGF G CEG
Sbjct: 1253 LPGFAGERCEGDI 1265
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C T M C + C N GTC+ C+CP GF G+HCE +
Sbjct: 935 CLCLPGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTES 994
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C CP G+ G +C + CLN+GTC C+CP G
Sbjct: 995 SCFNGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDGLGTYRCTCPLG 1054
Query: 107 FQGLHCE 113
+ G +C+
Sbjct: 1055 YTGKNCQ 1061
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 63/140 (45%), Gaps = 29/140 (20%)
Query: 1 MCQCPKGYQGTYCGTA--MCFPQ-CLNNGTCT---APGVCSCPPGFQGLHCEG------- 47
C CP GY G C T +C P C N GTC A C CPPG+ G +C+
Sbjct: 1048 RCTCPLGYTGKNCQTLVNLCSPSPCKNKGTCAQEKARPRCLCPPGWDGAYCDVLNVSCKA 1107
Query: 48 ---GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAMCFPQCLNN-----GTCT 96
G + C + G C + CQCP GY G+YC + +C +N TC+
Sbjct: 1108 AALQKGVPVEHLCQHSGICINAGNTHHCQCPLGYTGSYCEEQL--DECASNPCQHGATCS 1165
Query: 97 APG---VCSCPPGFQGLHCE 113
C C PG+QG++CE
Sbjct: 1166 DFIGGYRCECVPGYQGVNCE 1185
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGC 53
CQCP+ + G +C + C P C+N GTC G C C PGF+G +CE
Sbjct: 206 RCQCPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGDFTSECHCLPGFEGSNCERNIDDCP 265
Query: 54 DQKCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ---CLNNGTCT 96
+ KC NGG C + C+CP + G +C + C Q C N GTCT
Sbjct: 266 NHKCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
MC+CP G+ G C + C C N G+C C C PGF G C+
Sbjct: 896 MCECPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDMNECLS 955
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPP 105
+ C NGG C + C CP G+ G +C + C N GTC C CP
Sbjct: 956 EPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPV 1015
Query: 106 GFQGLHC 112
GF G C
Sbjct: 1016 GFTGPFC 1022
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ- 55
C C G+ G C T +C C N TC++ C CP G G C+ CD
Sbjct: 131 CTCQVGFTGKQCQWTDVCLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINE-CDIP 189
Query: 56 -KCSNGGWCDS---QQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSCP 104
+C +GG C + CQCP+ + G +C + C P C+N GTC G C C
Sbjct: 190 GRCQHGGTCLNLPGSYRCQCPQRFTGQHCDSPYVPCAPSPCVNGGTCRQTGDFTSECHCL 249
Query: 105 PGFQGLHCE 113
PGF+G +CE
Sbjct: 250 PGFEGSNCE 258
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C C KG++G C + CLN GTC C C + G +C+ P
Sbjct: 780 RCTCKKGFKGYNCQVNIDECASNPCLNQGTCLDDVSGYTCHCMLPYTGKNCQTVLAPCSP 839
Query: 55 QKCSNGGWCD-----SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSC 103
C N C C C G+QG C + C + C+NNG C +C C
Sbjct: 840 NPCENAAVCKEAPNFESFTCLCAPGWQGQRCTVDVDECVSKPCMNNGICHNTQGSYMCEC 899
Query: 104 PPGFQGLHCE 113
PPGF G+ CE
Sbjct: 900 PPGFSGMDCE 909
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPGV-----CSCPPGFQGLHCEGGPGPGC- 53
C+CP+G+ G YC +C N GTC + C C PGF G C+ C
Sbjct: 51 CRCPEGFLGEYCQHRDPCEKNRCQNGGTCVTQAMLGKATCRCAPGFTGEDCQYSTSHPCF 110
Query: 54 -DQKCSNGGWCD----SQQMCQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPG---VCSC 103
+ C NGG C C C G+ G C T +C C N TC++ C C
Sbjct: 111 VSRPCQNGGTCHMLSWDTYECTCQVGFTGKQCQWTDVCLSHPCENGSTCSSVANQFSCRC 170
Query: 104 PPGFQGLHCEGGT 116
P G G C+
Sbjct: 171 PAGITGQKCDADI 183
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 22 CLNNGTCTA----PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM-----CQCP 72
C+N GTC G C CP GF G +C+ P +C NGG C +Q M C+C
Sbjct: 35 CVNEGTCVTYHNGTGYCRCPEGFLGEYCQHR-DPCEKNRCQNGGTCVTQAMLGKATCRCA 93
Query: 73 KGYQGTYCGTAMCFP-----QCLNNGTCTAPG----VCSCPPGFQGLHCE 113
G+ G C + P C N GTC C+C GF G C+
Sbjct: 94 PGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWDTYECTCQVGFTGKQCQ 143
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+C KGY G C + C C N+ TC C C PGF+G+HCE
Sbjct: 442 CECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSN 501
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GVCSCPPG 106
C N G C + C CP G+ G C + CLN C C C G
Sbjct: 502 PCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATG 561
Query: 107 FQGLHCE 113
F G C+
Sbjct: 562 FTGTLCD 568
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 22/133 (16%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE---GGPGPGCDQK- 56
+C CP+ Y+G C + N+ C G C G HCE G GP C+
Sbjct: 400 ICTCPQAYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDI 457
Query: 57 -------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---V 100
C N C + C C G++G +C + Q C+NNG C
Sbjct: 458 NECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQ 517
Query: 101 CSCPPGFQGLHCE 113
C CPPGF G C+
Sbjct: 518 CLCPPGFTGPVCQ 530
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 51/132 (38%), Gaps = 23/132 (17%)
Query: 2 CQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------VCSCPPGFQGLHCEGGPGPG 52
C C + G +C T + PQ CLN GTC +C CPPGF G C+ G
Sbjct: 1290 CVCRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNVPDGFICRCPPGFSGARCQSSCG-- 1347
Query: 53 CDQKCSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPG-----VCSCP 104
KC G C S C CP C + C + GTC C C
Sbjct: 1348 -QVKCRRGEQCVHTASGPHCFCPNHKD---CESGCASNPCQHGGTCYPQRQPPYYSCRCS 1403
Query: 105 PGFQGLHCEGGT 116
P F G HCE T
Sbjct: 1404 PPFWGSHCESYT 1415
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 57/164 (34%), Gaps = 52/164 (31%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G++G +C + Q C+NNG C C CPPGF G C+
Sbjct: 480 CLCMPGFKGVHCELEVNECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSST 539
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGT------------------------------ 82
C NG C CQC G+ GT C
Sbjct: 540 PCLNGAKCIDHPNGYECQCATGFTGTLCDENIDNCDPDPCHHGQCQDGIDSYTCICNPGY 599
Query: 83 --AMCFPQ--------CLNNGTCTAPG---VCSCPPGFQGLHCE 113
A+C Q CLN+G C C+C PG GL+CE
Sbjct: 600 MGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGLNCE 643
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 16/87 (18%)
Query: 41 QGLHCEGGPGPGCDQKCSNGGWCDSQQ----MCQCPKGYQGTYCGTAM--CFPQCLNNGT 94
L C GG P C N G C + C+CP+G+ G YC +C N GT
Sbjct: 24 HALQCRGGQEP-----CVNEGTCVTYHNGTGYCRCPEGFLGEYCQHRDPCEKNRCQNGGT 78
Query: 95 CTAPGV-----CSCPPGFQGLHCEGGT 116
C + C C PGF G C+ T
Sbjct: 79 CVTQAMLGKATCRCAPGFTGEDCQYST 105
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 44/123 (35%), Gaps = 14/123 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C + F C TC A C CP G GL C
Sbjct: 324 CVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCLCPEGKAGLLCHLDDA-CISN 382
Query: 56 KCSNGGWCDS-----QQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGL 110
C G CD+ Q +C CP+ Y+G C + N+ C G C G
Sbjct: 383 PCHKGALCDTNPLNGQYICTCPQAYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AF 440
Query: 111 HCE 113
HCE
Sbjct: 441 HCE 443
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 34 CSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFP 87
C C G+ G++CE C NGG C++ C C KG++G C +
Sbjct: 743 CLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASN 802
Query: 88 QCLNNGTC 95
CLN GTC
Sbjct: 803 PCLNQGTC 810
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G C + C+ CLN+G C C+C PG GL+CE
Sbjct: 593 CICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGLNCEINFDDCASN 652
Query: 56 KCSNGGWCD--SQQMCQCPKGYQGTYCGTAM 84
C +G D ++ C C G+ G C +
Sbjct: 653 PCLHGACVDGINRYSCVCSPGFTGQRCNIDI 683
>sp|Q75N90|FBN3_HUMAN Fibrillin-3 OS=Homo sapiens GN=FBN3 PE=2 SV=3
Length = 2809
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 25 NGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAM 84
G C+ P +C+C G C G GC C NGG C C C KGY GT CG +
Sbjct: 92 EGFCSQPNLCTCADGTLAPSCGVSRGSGCSVSCMNGGTCRGAS-CLCQKGYTGTVCGQPI 150
Query: 85 CFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C C N G C P C+C GF G CE
Sbjct: 151 CDRGCHNGGRCIGPNRCACVYGFMGPQCE 179
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 24/45 (53%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46
C C KGY GT CG +C C N G C P C+C GF G CE
Sbjct: 135 CLCQKGYTGTVCGQPICDRGCHNGGRCIGPNRCACVYGFMGPQCE 179
>sp|P31695|NOTC4_MOUSE Neurogenic locus notch homolog protein 4 OS=Mus musculus GN=Notch4
PE=1 SV=2
Length = 1964
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 22 CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGY 75
C N G C G C CPPGFQG C+ P C +G C Q +CQC GY
Sbjct: 897 CQNGGLCIDTGSSYFCRCPPGFQGKLCQDNMNPCEPNPCHHGSTCVPQPSGYVCQCAPGY 956
Query: 76 QGTYCGTAM--CFPQ-CLNNGTCTA-PG--VCSCPPGFQGLHCEGGT 116
+G C + C Q C N+GTCT+ PG C+CPPGF GL CEG
Sbjct: 957 EGQNCSKVLEACQSQPCHNHGTCTSRPGGFHCACPPGFVGLRCEGDV 1003
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 63/132 (47%), Gaps = 20/132 (15%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA-PG--VCSCPPGFQGLHCEGGPGPGCD 54
+CQC GY+G C + C Q C N+GTCT+ PG C+CPPGF GL CEG D
Sbjct: 949 VCQCAPGYEGQNCSKVLEACQSQPCHNHGTCTSRPGGFHCACPPGFVGLRCEGDVDECLD 1008
Query: 55 QKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTA-----PG-V 100
+ C G + CQC G+ G C M Q C N G+C PG
Sbjct: 1009 RPCHPSGTAACHSLANAFYCQCLPGHTGQRCEVEMDLCQSQPCSNGGSCEITTGPPPGFT 1068
Query: 101 CSCPPGFQGLHC 112
C CP GF+G C
Sbjct: 1069 CHCPKGFEGPTC 1080
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 58/131 (44%), Gaps = 15/131 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCD 54
+C C +G+ G C T + C + GTC C+CP G+ GL C
Sbjct: 673 LCVCDEGWTGPECETELGGCISTPCAHGGTCHPQPSGYNCTCPAGYMGLTCSEEVTACHS 732
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCT-APGV--CSCPP 105
C NGG C + C C + G +C TA+ CLN GTC PG C C
Sbjct: 733 GPCLNGGSCSIRPEGYSCTCLPSHTGRHCQTAVDHCVSASCLNGGTCVNKPGTFFCLCAT 792
Query: 106 GFQGLHCEGGT 116
GFQGLHCE T
Sbjct: 793 GFQGLHCEEKT 803
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 56/134 (41%), Gaps = 22/134 (16%)
Query: 2 CQCPKGYQGTYCGTA--MCFP-QCLNNGTC-------TAPGVCSCPPGFQGLHCEGGPGP 51
C CP G +G C C P CLN GTC + +C CPPGF GL CE P
Sbjct: 217 CLCPVGQEGPQCKLRKGACPPGSCLNGGTCQLVPEGHSTFHLCLCPPGFTGLDCEMNPDD 276
Query: 52 GCDQKCSNGGWC---DSQQMCQCPKGYQGTYCGTAMCF------PQCLNNGTCTAPG--- 99
+C NG C C CPK ++G C + P+C N GTC
Sbjct: 277 CVRHQCQNGATCLDGLDTYTCLCPKTWKGWDCSEDIDECEARGPPRCRNGGTCQNTAGSF 336
Query: 100 VCSCPPGFQGLHCE 113
C C G+ G CE
Sbjct: 337 HCVCVSGWGGAGCE 350
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCT-APGV--CSCPPGFQGLHCEGGPGPGC-D 54
C C + G +C TA+ CLN GTC PG C C GFQGLHCE P C D
Sbjct: 750 CTCLPSHTGRHCQTAVDHCVSASCLNGGTCVNKPGTFFCLCATGFQGLHCEEKTNPSCAD 809
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM 84
C N C C C GY G+ C T +
Sbjct: 810 SPCRNKATCQDTPRGARCLCSPGYTGSSCQTLI 842
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 59/134 (44%), Gaps = 24/134 (17%)
Query: 2 CQCPKGYQGTYCGTA-MCFPQ-CLNNGTCTA--PGV-CSCPPGFQGLHCEGG-------P 49
C C G+ G C C C N G C A P + C CPPGF+G CE P
Sbjct: 140 CSCEPGWTGEQCQLRDFCSANPCANGGVCLATYPQIQCRCPPGFEGHTCERDINECFLEP 199
Query: 50 GPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTA--MCFP-QCLNNGTC-------TAPG 99
GP C Q S S Q C CP G +G C C P CLN GTC +
Sbjct: 200 GP-CPQGTSCHNTLGSYQ-CLCPVGQEGPQCKLRKGACPPGSCLNGGTCQLVPEGHSTFH 257
Query: 100 VCSCPPGFQGLHCE 113
+C CPPGF GL CE
Sbjct: 258 LCLCPPGFTGLDCE 271
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G +G C + CLN C C C PGF G CE
Sbjct: 496 CLCPPGLEGRLCEVEVNECTSNPCLNQAACHDLLNGFQCLCLPGFTGARCEKDMDECSST 555
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQCLNN-----GTC-TAPGV--CSCP 104
C+NGG C Q C+C G++G +C + +CL++ +C PG C C
Sbjct: 556 PCANGGRCRDQPGAFYCECLPGFEGPHCEKEV--DECLSDPCPVGASCLDLPGAFFCLCR 613
Query: 105 PGFQGLHCE 113
PGF G CE
Sbjct: 614 PGFTGQLCE 622
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 57/140 (40%), Gaps = 28/140 (20%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTA-----PG-VCSCPPGFQGLHCEGGPGPG 52
CQC G+ G C M Q C N G+C PG C CP GF+G C
Sbjct: 1028 CQCLPGHTGQRCEVEMDLCQSQPCSNGGSCEITTGPPPGFTCHCPKGFEGPTCSHKALSC 1087
Query: 53 CDQKCSNGGWC------DSQQMCQCPKGYQGTYCGT------AMCFPQCLNNGTCT-APG 99
C NGG C S +C C G+ G C T CL+NGTCT PG
Sbjct: 1088 GIHHCHNGGLCLPSPKPGSPPLCACLSGFGGPDCLTPPAPPGCGPPSPCLHNGTCTETPG 1147
Query: 100 V------CSCPPGFQGLHCE 113
+ C+CPP G C+
Sbjct: 1148 LGNPGFQCTCPPDSPGPRCQ 1167
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 49/122 (40%), Gaps = 31/122 (25%)
Query: 22 CLNNGTCTA----PGVCSCPPGFQGLHCEGGPGPGCD-QKCSNGGWCDS----------- 65
C N GTC G+C C PGF G C+ P P D Q C NGG C +
Sbjct: 32 CANGGTCLRLSQGQGICQCAPGFLGETCQ-FPDPCRDTQLCKNGGSCQALLPTPPSSRSP 90
Query: 66 ------QQMCQCPKGYQGTYCGT---AMCFPQ-CLNNGTCTAPGV----CSCPPGFQGLH 111
C CP G+ G C T +C P C N G C CSC PG+ G
Sbjct: 91 TSPLTPHFSCTCPSGFTGDRCQTHLEELCPPSFCSNGGHCYVQASGRPQCSCEPGWTGEQ 150
Query: 112 CE 113
C+
Sbjct: 151 CQ 152
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 49/133 (36%), Gaps = 20/133 (15%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQ--------CLNNGTCT-APGV--CSCPPGFQGLHCEGGP 49
+C C GY G+ C + Q C + G+C PG C C PG+ G CE
Sbjct: 414 LCICQPGYSGSTCHQDLDECQMAQQGPSPCEHGGSCINTPGSFNCLCLPGYTGSRCEADH 473
Query: 50 GPGCDQKCSNGGWCDSQQM---CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GV 100
Q C G C C CP G +G C + CLN C
Sbjct: 474 NECLSQPCHPGSTCLDLLATFHCLCPPGLEGRLCEVEVNECTSNPCLNQAACHDLLNGFQ 533
Query: 101 CSCPPGFQGLHCE 113
C C PGF G CE
Sbjct: 534 CLCLPGFTGARCE 546
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+C GY G+YC + C P C N TCT C C G+ G++C
Sbjct: 1131 CRCQAGYTGSYCEDLVDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSH 1190
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM-----------CFPQCLNNGTCTAPG-- 99
C NGG C + C CP+G QG +C + P+C NNGTC
Sbjct: 1191 PCQNGGTCLDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVGG 1250
Query: 100 -VCSCPPGFQGLHCEGGT 116
C+CPPGF G CEG
Sbjct: 1251 YSCTCPPGFVGERCEGDV 1268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 60/141 (42%), Gaps = 28/141 (19%)
Query: 2 CQCPKGYQGTYCGTAM-----------CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEG 47
C CP+G QG +C + P+C NNGTC C+CPPGF G CEG
Sbjct: 1207 CSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVGGYSCTCPPGFVGERCEG 1266
Query: 48 GPGPGCDQKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMC---FPQCLNNGTC---- 95
C G + Q C+C G+ G C + + C N GTC
Sbjct: 1267 DVNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVAS 1326
Query: 96 -TAPG-VCSCPPGFQGLHCEG 114
TA G +C CP GF+G CE
Sbjct: 1327 NTARGFICKCPAGFEGATCEN 1347
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 15/129 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
C C G++GT+C + C N CT C+CP GF G+HCE +
Sbjct: 930 FCDCLPGFRGTFCEEDINECASDPCRNGANCTDCVDSYTCTCPAGFSGIHCENNTPDCTE 989
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTA---PGVCSCPP 105
C NGG C + C CP G+ G+YC C Q CL+ GTC C+CP
Sbjct: 990 SSCFNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCTCPQ 1049
Query: 106 GFQGLHCEG 114
G+ G +C+
Sbjct: 1050 GYTGPNCQN 1058
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+QG C + C + +C C C G+ G +CE
Sbjct: 855 CVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDCRPN 914
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C C G++GT+C + C N CT C+CP G
Sbjct: 915 PCHNGGSCTDGINTAFCDCLPGFRGTFCEEDINECASDPCRNGANCTDCVDSYTCTCPAG 974
Query: 107 FQGLHCEGGT 116
F G+HCE T
Sbjct: 975 FSGIHCENNT 984
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY+G +C T C CL+NG C C CP GF G C+
Sbjct: 476 CICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQYDVDECAST 535
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGF 107
C NG C + C C +GY GT+C + C P + G+C A C C PG+
Sbjct: 536 PCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCRPGY 595
Query: 108 QGLHCE 113
G HCE
Sbjct: 596 TGHHCE 601
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C C +GY GT+C + C P + G+C A C C PG+ G HCE Q
Sbjct: 552 CVCTEGYTGTHCEVDIDECDPDPCHYGSCKDGVATFTCLCRPGYTGHHCETNINECSSQP 611
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQ 108
C +GG C D+ +C C KG G C + C ++GTC C+C PG+
Sbjct: 612 CRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSPCDSGTCLDKIDGYECACEPGYT 671
Query: 109 GLHC 112
G C
Sbjct: 672 GSMC 675
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ G+YC C Q CL+ GTC C+CP G+ G +C+
Sbjct: 1007 CLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCTCPQGYTGPNCQNLVHWCDSS 1066
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGT 82
C NGG C +Q C+CP G+ G YC
Sbjct: 1067 PCKNGGKCWQTHTQYRCECPSGWTGLYCDV 1096
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
CQC +GY G C + C C N+ TC C C PG++G+HCE
Sbjct: 438 CQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASS 497
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C + G C ++ C+CP G+ G C + C N C C C G
Sbjct: 498 PCLHNGRCLDKINEFQCECPTGFTGHLCQYDVDECASTPCKNGAKCLDGPNTYTCVCTEG 557
Query: 107 FQGLHCE 113
+ G HCE
Sbjct: 558 YTGTHCE 564
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 53/140 (37%), Gaps = 28/140 (20%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ-----------CLNNGTC-------TAPGVCSCPPGFQGL 43
C+ G + CG A P+ C N GTC A CSC GF G
Sbjct: 37 CEAANGTEACVCGGAFVGPRCQDPNPCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGP 96
Query: 44 HCEGGPGPGC-DQKCSNGGWCD----SQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTC- 95
C C C NGG CD ++ C+CP G+ G C A C N G C
Sbjct: 97 LCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCL 156
Query: 96 --TAPGVCSCPPGFQGLHCE 113
A +C CPP F G C
Sbjct: 157 PFEASYICHCPPSFHGPTCR 176
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+CP G+ G C A C N G C A +C CPP F G C C QK
Sbjct: 127 CRCPPGWSGKSCQQADPCASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNE-CGQK 185
Query: 57 ---CSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSC 103
C +GG C ++ C C + G C C P C N GTC G C+C
Sbjct: 186 PGLCRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTHECAC 245
Query: 104 PPGFQGLHCE 113
PGF G +CE
Sbjct: 246 LPGFTGQNCE 255
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
+C C +G+ G C T + CLN GTC A C+C + G CE P
Sbjct: 776 VCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAP 835
Query: 55 QKCSNGGWCDSQQ-----MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSC 103
C NGG C + C CP G+QG C + C + +C C C
Sbjct: 836 SPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCHC 895
Query: 104 PPGFQGLHCE 113
G+ G +CE
Sbjct: 896 QAGYSGRNCE 905
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 52/134 (38%), Gaps = 22/134 (16%)
Query: 2 CQCPKGYQGTYCGTAMCF---PQCLNNGTC-----TAPG-VCSCPPGFQGLHCEGGPGPG 52
C+C G+ G C + + C N GTC TA G +C CP GF+G CE
Sbjct: 1293 CECRAGHTGRRCESVINGCKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTC 1352
Query: 53 CDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFP-----QCLNNGTCTAPG----- 99
+C NGG C S C C + G C P C N GTC
Sbjct: 1353 GSLRCLNGGTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCEPTSESPFY 1412
Query: 100 VCSCPPGFQGLHCE 113
C CP F GL C
Sbjct: 1413 RCLCPAKFNGLLCH 1426
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 34/141 (24%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQCLNNGT------CTAPGVCSCPPGFQGLHCEGGPGPGCD 54
C+CP G G C C N G+ +C+CP G+ G P C
Sbjct: 359 CECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTG--------PACS 410
Query: 55 QK----------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC--- 95
Q C + G C + CQC +GY G C + C C N+ TC
Sbjct: 411 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQ 470
Query: 96 TAPGVCSCPPGFQGLHCEGGT 116
C C PG++G+HCE T
Sbjct: 471 IGEFQCICMPGYEGVHCEVNT 491
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GT C C C+N GTC T+ VC+C GF G +C+
Sbjct: 739 CDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASN 798
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG-----VCSCP 104
C N G C C C Y G C + C P C N G C C CP
Sbjct: 799 PCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCAPSPCRNGGECRQSEDYESFSCVCP 858
Query: 105 PGFQGLHCE 113
G+QG CE
Sbjct: 859 TGWQGQTCE 867
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 49/130 (37%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGT-----AMCFPQCLNNGTCT---APGVCSCPPGFQGLHCEGGPGPG 52
+C CP GY G C ++ C + G C C C G+ G CE
Sbjct: 397 ICTCPSGYTGPACSQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNEC 456
Query: 53 CDQKCSNGGWCDSQQ---MCQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSC 103
C N C Q C C GY+G +C T C CL+NG C C C
Sbjct: 457 VSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCEC 516
Query: 104 PPGFQGLHCE 113
P GF G C+
Sbjct: 517 PTGFTGHLCQ 526
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 22 CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC---DSQQMCQCPKG 74
C N GTC G C+C PGF G +CE C NGG C + C+CP
Sbjct: 227 CQNGGTCRPTGDVTHECACLPGFTGQNCEENIDDCPGNNCKNGGACVDGVNTYNCRCPPE 286
Query: 75 YQGTYC 80
+ G YC
Sbjct: 287 WTGQYC 292
>sp|P13508|GLP1_CAEEL Protein glp-1 OS=Caenorhabditis elegans GN=glp-1 PE=1 SV=1
Length = 1295
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 30/142 (21%)
Query: 2 CQCPKGYQGTYCGTA----MCFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
C C GY+G +C + C+NN TC C+C PG+ G +CE D
Sbjct: 218 CVCDSGYEGEFCNKDKNECLIEETCVNNSTCFNLHGDFTCTCKPGYAGKYCEEAIDMCKD 277
Query: 55 QKCSNGGWC--DSQQM---------------CQCPKGYQGTYCGTAMCFPQC-LNNGTCT 96
C N G+C DS QM +CP G+ G +C + P C +NGTC
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 97 AP-----GVCSCPPGFQGLHCE 113
G C C P + G CE
Sbjct: 338 NDGRCINGFCVCEPDYIGDRCE 359
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 2 CQCPKGYQGTYCGT-AMCFPQ-CLNNGTCT-APGV--CSCPPGFQGLHCEGGPGPGCDQK 56
C CP G+ G C +C P C N GTC GV C+CP GF G +CE C +
Sbjct: 394 CHCPLGFYGLNCEQHLLCTPTTCANGGTCEGVNGVIRCNCPNGFSGDYCEIKDRQLCSRH 453
Query: 57 -CSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQ 88
C NGG C + C+C GY G C + +
Sbjct: 454 PCKNGGVCKNTGYCECQYGYTGPTCEEVLVIEK 486
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 22 CLNNGTCTAPG----VCSCPPGFQGLHCEGGP--GPGCDQKCSNGGWCDSQQ---MCQCP 72
C+NN TC C CP GF GL+CE P C+NGG C+ C CP
Sbjct: 378 CVNNATCIDLKNSGYSCHCPLGFYGLNCEQHLLCTPTT---CANGGTCEGVNGVIRCNCP 434
Query: 73 KGYQGTYCGTA---MCFPQ-CLNNGTCTAPGVCSCPPGFQGLHCE 113
G+ G YC +C C N G C G C C G+ G CE
Sbjct: 435 NGFSGDYCEIKDRQLCSRHPCKNGGVCKNTGYCECQYGYTGPTCE 479
>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1
Length = 685
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 61/132 (46%), Gaps = 17/132 (12%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTCT-----APGVCSCPPGFQGLHCEGGPGPGC 53
C CP GY G +C T C C N G+C A C CPP F G +CE
Sbjct: 348 CLCPPGYYGLHCEHSTLSCADSPCFNGGSCRERNQGANYACECPPNFTGSNCEKKVDRCT 407
Query: 54 DQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCP 104
C+NGG C ++ +MC+C G+ GTYC + C + GTC +C+CP
Sbjct: 408 SNPCANGGQCLNRGPSRMCRCRPGFTGTYCELHVSDCARNPCAHGGTCHDLENGLMCTCP 467
Query: 105 PGFQGLHCEGGT 116
GF G CE T
Sbjct: 468 AGFSGRRCEVRT 479
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 54/131 (41%), Gaps = 19/131 (14%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+CP + G+ C + C N G C G +C C PGF G +CE
Sbjct: 388 CECPPNFTGSNCEKKVDRCTSNPCANGGQCLNRGPSRMCRCRPGFTGTYCELHVSDCARN 447
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQC-----LNNGTC-----TAPGVCS 102
C++GG C + MC CP G+ G C C N TC T VC+
Sbjct: 448 PCAHGGTCHDLENGLMCTCPAGFSGRRCEVRTSIDACASSPCFNRATCYTDLSTDTFVCN 507
Query: 103 CPPGFQGLHCE 113
CP GF G CE
Sbjct: 508 CPYGFVGSRCE 518
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 54/129 (41%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPGV---CSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G C + C N G+C C CPPG+ GLHCE D
Sbjct: 310 CTCRPGYTGVDCELELSECDSNPCRNGGSCKDQEDGYHCLCPPGYYGLHCEHSTLSCADS 369
Query: 56 KCSNGGWCDSQQM-----CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCP 104
C NGG C + C+CP + G+ C + C N G C G +C C
Sbjct: 370 PCFNGGSCRERNQGANYACECPPNFTGSNCEKKVDRCTSNPCANGGQCLNRGPSRMCRCR 429
Query: 105 PGFQGLHCE 113
PGF G +CE
Sbjct: 430 PGFTGTYCE 438
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 57/156 (36%), Gaps = 43/156 (27%)
Query: 4 CPKGYQGTYCGTAMCFPQCLN-NGTCTAPGVCSCPPGFQGLHC----------------- 45
C G+ G YC +C C NG C+ P C C PG+QG C
Sbjct: 208 CLPGWTGEYCQQPICLSGCHEQNGYCSKPAECLCRPGWQGRLCNECIPHNGCRHGTCSTP 267
Query: 46 ------EGGPGPGCDQK---------CSNGGWCDSQ----QMCQCPKGYQGTYCGTAMC- 85
EG G CDQ C NG C + C C GY G C +
Sbjct: 268 WQCTCDEGWGGLFCDQDLNYCTHHSPCKNGATCSNSGQRSYTCTCRPGYTGVDCELELSE 327
Query: 86 --FPQCLNNGTCTAPGV---CSCPPGFQGLHCEGGT 116
C N G+C C CPPG+ GLHCE T
Sbjct: 328 CDSNPCRNGGSCKDQEDGYHCLCPPGYYGLHCEHST 363
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 27 TCTAPGVCSCPPGFQGLHCEGGPGPGCDQKC-SNGGWCDSQQMCQCPKGYQGTYCGTAMC 85
C G SC PG+ G +C+ P C C G+C C C G+QG C +
Sbjct: 199 VCQPDGNLSCLPGWTGEYCQ---QPICLSGCHEQNGYCSKPAECLCRPGWQGRLCNECIP 255
Query: 86 FPQCLNNGTCTAPGVCSCPPGFQGLHCE 113
C +GTC+ P C+C G+ GL C+
Sbjct: 256 HNGC-RHGTCSTPWQCTCDEGWGGLFCD 282
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPG-- 52
MC+C G+ GTYC + C + GTC +C+CP GF G CE
Sbjct: 425 MCRCRPGFTGTYCELHVSDCARNPCAHGGTCHDLENGLMCTCPAGFSGRRCEVRTSIDAC 484
Query: 53 CDQKCSNGGWCDSQQ-----MCQCPKGYQGTYCGTAMCFP 87
C N C + +C CP G+ G+ C + P
Sbjct: 485 ASSPCFNRATCYTDLSTDTFVCNCPYGFVGSRCEFPVGLP 524
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
C CP G++G C + C N CT C+C PGF G+HCE +
Sbjct: 929 FCNCPAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCQPGFSGIHCESNTPDCTE 988
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAP---GVCSCPP 105
C NGG C + CQCP G+ G+YC + C + CLN GTC C+CP
Sbjct: 989 SSCFNGGTCIDGINTFTCQCPPGFTGSYCQHDINECDSKPCLNGGTCQDSYGTYKCTCPQ 1048
Query: 106 GFQGLHCEG 114
G+ GL+C+
Sbjct: 1049 GYTGLNCQN 1057
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 59/141 (41%), Gaps = 30/141 (21%)
Query: 2 CQCPKGYQGTYCGTAM-----------CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEG 47
C CP+G QG +C + P+C NNG C C CPPGF G CEG
Sbjct: 1206 CSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKCIDRVGGYNCICPPGFVGERCEG 1265
Query: 48 GPGPGCDQKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMC----FPQCLNNGTCTAP 98
C + G + Q+ C+C +G+ G C + + P C N GTC
Sbjct: 1266 DVNECLSNPCDSRGTQNCIQLVNDYRCECRQGFTGRRCESVVDGCKGMP-CRNGGTCAVA 1324
Query: 99 G------VCSCPPGFQGLHCE 113
+C CPPGF G CE
Sbjct: 1325 SNTERGFICKCPPGFDGATCE 1345
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 58/139 (41%), Gaps = 23/139 (16%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C+C GY G+YC + C P C N TCT C C G+ G++C
Sbjct: 1129 FCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLS 1188
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAM-----------CFPQCLNNGTCTAPG- 99
C NGG C + C CP+G QG +C + P+C NNG C
Sbjct: 1189 HPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKCIDRVG 1248
Query: 100 --VCSCPPGFQGLHCEGGT 116
C CPPGF G CEG
Sbjct: 1249 GYNCICPPGFVGERCEGDV 1267
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+CP G+QG C M C + C N TC C+C PG+ G +CE
Sbjct: 854 CECPPGWQGQTCEIDMNECVNRPCRNGATCQNTNGSYKCNCKPGYTGRNCEMDIDDCQPN 913
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C CP G++G C + C N CT C+C PG
Sbjct: 914 PCHNGGSCSDGINMFFCNCPAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCQPG 973
Query: 107 FQGLHCEGGT 116
F G+HCE T
Sbjct: 974 FSGIHCESNT 983
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
CQC +G+ G +C + C P + GTC A C C PG+ G C+ +
Sbjct: 551 CQCTEGFTGRHCEQDINECIPDPCHYGTCKDGIATFTCLCRPGYTGRLCDNDINECLSKP 610
Query: 57 CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQ 108
C NGG C ++ +C CPKG G C T + C +NG C C+C PG+
Sbjct: 611 CLNGGQCTDRENGYICTCPKGTTGVNCETKIDDCASNLCDNGKCIDKIDGYECTCEPGYT 670
Query: 109 GLHC 112
G C
Sbjct: 671 GKLC 674
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 2 CQCPKGYQGTYCGTAMC----FPQCLNNGTCTAPG------VCSCPPGFQGLHCEGGPGP 51
C+C +G+ G C + + P C N GTC +C CPPGF G CE
Sbjct: 1292 CECRQGFTGRRCESVVDGCKGMP-CRNGGTCAVASNTERGFICKCPPGFDGATCEYDSRT 1350
Query: 52 GCDQKCSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFP----QCLNNGTCTAPGV---- 100
+ +C NGG C S C C +GY G C + P C N GTC
Sbjct: 1351 CSNLRCQNGGTCISVLTSSKCVCSEGYTGATCQYPVISPCASHPCYNGGTCQFFAEEPFF 1410
Query: 101 -CSCPPGFQGLHCE 113
C CP F GL C
Sbjct: 1411 QCFCPKNFNGLFCH 1424
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+CP G+ G C A C N G C +C CPPGF G C+
Sbjct: 128 CRCPPGWTGDSCQQADPCASNPCANGGKCLPFEIQYICKCPPGFHGATCKQDINECSQNP 187
Query: 57 CSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSCPPG 106
C NGG C ++ C C + G C C P CLN GTC C+C PG
Sbjct: 188 CKNGGQCINEFGSYRCTCQNRFTGRNCDEPYVPCNPSPCLNGGTCRQTDDTSYDCTCLPG 247
Query: 107 FQGLHCE 113
F G +CE
Sbjct: 248 FSGQNCE 254
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 51/137 (37%), Gaps = 25/137 (18%)
Query: 2 CQCPKGYQGTYCGT-------------AMCFPQCLNNGTCTAPG---VCSCPPGFQGLHC 45
C+C G+ G YC C N+G C G C C G+ G +C
Sbjct: 1082 CECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMCVDTGNTHFCRCQAGYTGSYC 1141
Query: 46 EGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA-- 97
E C NG C C+C GY G C + C C N GTC
Sbjct: 1142 EEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLI 1201
Query: 98 -PGVCSCPPGFQGLHCE 113
CSCP G QG+HCE
Sbjct: 1202 NTYKCSCPRGTQGVHCE 1218
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP+GY G C + C C N+ TC C C PG++GL+CE
Sbjct: 437 CNCPQGYAGPRCEIDVNECLSNPCQNDSTCLDQIGEFQCICMPGYEGLYCETNIDECASN 496
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQCLN----NGTCTAPG----VCSCP 104
C + G C + C CP G+ G C F +C + NG G C C
Sbjct: 497 PCLHNGKCIDKINEFRCDCPTGFSGNLCQHD--FDECTSTPCKNGAKCLDGPNSYTCQCT 554
Query: 105 PGFQGLHCE 113
GF G HCE
Sbjct: 555 EGFTGRHCE 563
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 52/130 (40%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGT-----AMCFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPG 52
+C CP GY G C ++ C + G CT C+CP G+ G CE
Sbjct: 396 ICTCPPGYTGPACNNDVDECSLGANPCEHGGRCTNTLGSFQCNCPQGYAGPRCEIDVNEC 455
Query: 53 CDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSC 103
C N C Q C C GY+G YC T + CL+NG C C C
Sbjct: 456 LSNPCQNDSTCLDQIGEFQCICMPGYEGLYCETNIDECASNPCLHNGKCIDKINEFRCDC 515
Query: 104 PPGFQGLHCE 113
P GF G C+
Sbjct: 516 PTGFSGNLCQ 525
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 47/111 (42%), Gaps = 18/111 (16%)
Query: 21 QCLNNGTC-------TAPGVCSCPPGFQGLHCEGGPGPGC-DQKCSNGGWCD-----SQQ 67
QC+N GTC +C CP GF C C + C NGG C+ ++
Sbjct: 67 QCMNFGTCEPVLQGNAIDFICHCPVGFTDKVCLTPVDNACVNNPCRNGGTCELLNSVTEY 126
Query: 68 MCQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCE 113
C+CP G+ G C A C N G C +C CPPGF G C+
Sbjct: 127 KCRCPPGWTGDSCQQADPCASNPCANGGKCLPFEIQYICKCPPGFHGATCK 177
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 28/135 (20%)
Query: 2 CQCPKGYQGTYCGTA-MCFPQCLNNGT------CTAPGVCSCPPGFQG-------LHCEG 47
C+CP G G C C N G+ +C+CPPG+ G C
Sbjct: 358 CECPHGRTGLLCHLDNACISNPCNEGSNCDTNPVNGKAICTCPPGYTGPACNNDVDECSL 417
Query: 48 GPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAP 98
G P C +GG C + C CP+GY G C + C C N+ TC
Sbjct: 418 GANP-----CEHGGRCTNTLGSFQCNCPQGYAGPRCEIDVNECLSNPCQNDSTCLDQIGE 472
Query: 99 GVCSCPPGFQGLHCE 113
C C PG++GL+CE
Sbjct: 473 FQCICMPGYEGLYCE 487
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLN----NGTCTAPG----VCSCPPGFQGLHCEGGPGPGC 53
C CP G+ G C F +C + NG G C C GF G HCE
Sbjct: 513 CDCPTGFSGNLCQHD--FDECTSTPCKNGAKCLDGPNSYTCQCTEGFTGRHCEQDINECI 570
Query: 54 DQKCSNGGWCD--SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPP 105
C G D + C C GY G C + C + CLN G CT +C+CP
Sbjct: 571 PDPCHYGTCKDGIATFTCLCRPGYTGRLCDNDINECLSKPCLNGGQCTDRENGYICTCPK 630
Query: 106 GFQGLHCE 113
G G++CE
Sbjct: 631 GTTGVNCE 638
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 37/92 (40%), Gaps = 8/92 (8%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
+C CPKG G C T + C +NG C C+C PG+ G C
Sbjct: 625 ICTCPKGTTGVNCETKIDDCASNLCDNGKCIDKIDGYECTCEPGYTGKLCNININECDSN 684
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM 84
C NGG C Q C CP GY C + +
Sbjct: 685 PCRNGGTCKDQINGFTCVCPDGYHDHMCLSEV 716
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 49/129 (37%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G+ C C C+N GTC T +C+C GF G +C+
Sbjct: 738 CDCEAGWSGSNCDINNNECESNPCMNGGTCKDMTGAYICTCKAGFSGPNCQTNINECSSN 797
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG-----VCSCP 104
C N G C C C Y G C + C N G C C CP
Sbjct: 798 PCLNHGTCIDDVAGYKCNCMLPYTGAICEAVLAPCAGSPCKNGGRCKESEDFETFSCECP 857
Query: 105 PGFQGLHCE 113
PG+QG CE
Sbjct: 858 PGWQGQTCE 866
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 22 CLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGCDQKCSNGGWC---DSQQMCQCPKG 74
CLN GTC C+C PGF G +CE C NGG C + CQCP
Sbjct: 226 CLNGGTCRQTDDTSYDCTCLPGFSGQNCEENIDDCPSNNCRNGGTCVDGVNTYNCQCPPD 285
Query: 75 YQGTYC 80
+ G YC
Sbjct: 286 WTGQYC 291
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+C+CP G+ G C + C N G C C+C F G +C+ P
Sbjct: 164 ICKCPPGFHGATCKQDINECSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCDEPYVPCNP 223
Query: 55 QKCSNGGWC----DSQQMCQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPGV----CSC 103
C NGG C D+ C C G+ G C + C N GTC GV C C
Sbjct: 224 SPCLNGGTCRQTDDTSYDCTCLPGFSGQNCEENIDDCPSNNCRNGGTC-VDGVNTYNCQC 282
Query: 104 PPGFQGLHC 112
PP + G +C
Sbjct: 283 PPDWTGQYC 291
>sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3
PE=1 SV=1
Length = 2318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 62/137 (45%), Gaps = 22/137 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP+G G++C + C Q C + GTC VC CP G+ G CE Q
Sbjct: 1071 CVCPEGRTGSHCEHEVDPCTAQPCQHGGTCRGYMGGYVCECPAGYAGDSCEDNIDECASQ 1130
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCG----------TAMCFPQCLNNGTCTAPG--- 99
C NGG C ++ +C CP G G C + QCL+NGTC
Sbjct: 1131 PCQNGGSCIDLVARYLCSCPPGTLGVLCEINEDDCDLGPSLDSGVQCLHNGTCVDLVGGF 1190
Query: 100 VCSCPPGFQGLHCEGGT 116
C+CPPG+ GLHCE
Sbjct: 1191 RCNCPPGYTGLHCEADI 1207
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCT---APGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP GY G +C + C P C N GTC + C C PG+ G HC+ P +
Sbjct: 911 CACPPGYGGFHCEIDLPDCSPSSCFNGGTCVDGVSSFSCLCRPGYTGTHCQYEADPCFSR 970
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV-CSCPPGFQ 108
C +GG C+ C C +G+ G+ C + + C N G C G C CPPG+
Sbjct: 971 PCLHGGICNPTHPGFECTCREGFTGSQCQNPVDWCSQAPCQNGGRCVQTGAYCICPPGWS 1030
Query: 109 GLHCE 113
G C+
Sbjct: 1031 GRLCD 1035
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GTYC + Q C+N G C C+CP GF G C+
Sbjct: 456 CICMAGFTGTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSMCQLDVDECAST 515
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQCLNNGTCT---APGVCSCPPGF 107
C NG C Q C+C +G++GT C + C P ++G C A C+C PG+
Sbjct: 516 PCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASFSCACAPGY 575
Query: 108 QGLHCE 113
G+ CE
Sbjct: 576 TGIRCE 581
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAMCF----PQCLNNGTC-TAPG--VCSCPPGFQGLHCEGGPGPGCD 54
C CP GYQG C + + C + GTC PG C CP G+ GL CE P
Sbjct: 145 CACPPGYQGQSCQSDIDECRSGTTCRHGGTCLNTPGSFRCQCPLGYTGLLCENPVVPCAP 204
Query: 55 QKCSNGGWC----DSQQMCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV----CSC 103
C NGG C D C C G++G C + +CLN GTC GV C C
Sbjct: 205 SPCRNGGTCRQSSDVTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVD-GVNTYNCQC 263
Query: 104 PPGFQGLHC 112
PP + G C
Sbjct: 264 PPEWTGQFC 272
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTAM-CFPQ-CLNNGTCTA----PGVCSCPPGFQGLHCEGGPGP-GCD 54
C+C +G+QG C C + C++ C+ C+CPPG+QG C+
Sbjct: 107 CRCLRGFQGPDCSQPDPCVSRPCVHGAPCSVGPDGRFACACPPGYQGQSCQSDIDECRSG 166
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV----CSCP 104
C +GG C + CQCP GY G C + C P C N GTC C+C
Sbjct: 167 TTCRHGGTCLNTPGSFRCQCPLGYTGLLCENPVVPCAPSPCRNGGTCRQSSDVTYDCACL 226
Query: 105 PGFQGLHCE 113
PGF+G +CE
Sbjct: 227 PGFEGQNCE 235
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPG-FQGLHCEGGPGPGCDQK--- 56
+C CP G+QG C + +C C G C+ PG F+ + G GP CDQ
Sbjct: 796 VCSCPPGWQGPRCQQDV--DECAGASPCGPHGTCTNLPGNFRCICHRGYTGPFCDQDIDD 853
Query: 57 -----CSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVC 101
C +GG C C C G+ G C A +CL++ GTCT A C
Sbjct: 854 CDPNPCLHGGSCQDGVGSFSCSCLDGFAGPRC--ARDVDECLSSPCGPGTCTDHVASFTC 911
Query: 102 SCPPGFQGLHCE 113
+CPPG+ G HCE
Sbjct: 912 ACPPGYGGFHCE 923
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCT---APGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+C +G++GT C + C P ++G C A C+C PG+ G+ CE Q
Sbjct: 532 CRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRSQP 591
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQCLNN----GTCTAPGV----CSCPP 105
C GG C + +C+CP G G C + C +N G C G+ C C P
Sbjct: 592 CRYGGKCLDLVDKYLCRCPPGTTGVNCEVNI--DDCASNPCTFGVCRD-GINRYDCVCQP 648
Query: 106 GFQGLHC 112
GF G C
Sbjct: 649 GFTGPLC 655
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 50/128 (39%), Gaps = 15/128 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFP-QCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+CQC +GY G C T + C C N TC C C GF G +CE
Sbjct: 417 LCQCGRGYTGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFTGTYCEVDIDECQS 476
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPP 105
C NGG C + C CP G+ G+ C + C N C C C
Sbjct: 477 SPCVNGGVCKDRVNGFSCTCPSGFSGSMCQLDVDECASTPCRNGAKCVDQPDGYECRCAE 536
Query: 106 GFQGLHCE 113
GF+G CE
Sbjct: 537 GFEGTLCE 544
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 29 TAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC----DSQQMCQCPKGYQGTYCGTAM 84
TA C C GFQG C P P + C +G C D + C CP GYQG C + +
Sbjct: 102 TARFSCRCLRGFQGPDC-SQPDPCVSRPCVHGAPCSVGPDGRFACACPPGYQGQSCQSDI 160
Query: 85 CFPQCLNNGTCTAPGV---------CSCPPGFQGLHCE 113
+C + TC G C CP G+ GL CE
Sbjct: 161 --DECRSGTTCRHGGTCLNTPGSFRCQCPLGYTGLLCE 196
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 49/121 (40%), Gaps = 37/121 (30%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNN-----GTCTAPGV---CSCPPGFQGLHCEGGPGPG 52
C C G+ G C ++ C + GTCT+ G+ C+C PGFQG CE P
Sbjct: 718 RCVCEPGWSGPRCSQSLAPDACESQPCQAGGTCTSDGIGFRCTCAPGFQGHQCEVL-SPC 776
Query: 53 CDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
C +GG C+S P L VCSCPPG+QG C
Sbjct: 777 TPSLCEHGGHCESD--------------------PDRLT--------VCSCPPGWQGPRC 808
Query: 113 E 113
+
Sbjct: 809 Q 809
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 53/143 (37%), Gaps = 30/143 (20%)
Query: 1 MCQCPKGYQGTYCG----------TAMCFPQCLNNGTCTAPG---VCSCPPGFQGLHCEG 47
+C CP G G C + QCL+NGTC C+CPPG+ GLHCE
Sbjct: 1146 LCSCPPGTLGVLCEINEDDCDLGPSLDSGVQCLHNGTCVDLVGGFRCNCPPGYTGLHCEA 1205
Query: 48 GPGPGCDQKCSNGGWCDSQQ------MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCT-- 96
C D Q C C G+ G C A+ C Q C + G C
Sbjct: 1206 DINECRPGACHAAHTRDCLQDPGGHFRCVCHPGFTGPRCQIALSPCESQPCQHGGQCRHS 1265
Query: 97 ------APGVCSCPPGFQGLHCE 113
C C P F GL CE
Sbjct: 1266 LGRGGGLTFTCHCVPPFWGLRCE 1288
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 53/135 (39%), Gaps = 28/135 (20%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQCLNNGTC-----TAPGVCSCPPGFQG-------LHCEG 47
C CP G G C A C + C + +C+CPPGF G C
Sbjct: 339 CACPMGKTGLLCHLDDACVSNPCHEDAICDTNPVSGRAICTCPPGFTGGACDQDVDECSI 398
Query: 48 GPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFP-QCLNNGTCTAPG-- 99
G P C + G C + Q +CQC +GY G C T + C C N TC
Sbjct: 399 GANP-----CEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCLDRIGQ 453
Query: 100 -VCSCPPGFQGLHCE 113
C C GF G +CE
Sbjct: 454 FTCICMAGFTGTYCE 468
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus
GN=Notch3 PE=2 SV=2
Length = 2319
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 62/137 (45%), Gaps = 22/137 (16%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP+G G++C + C Q C + GTC VC CP G+ G CE Q
Sbjct: 1072 CVCPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYMGGYVCECPTGYSGDSCEDDVDECASQ 1131
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYC--GTAMCFP--------QCLNNGTCTAPG--- 99
C NGG C + +C CP G G C C P +CL+NGTC
Sbjct: 1132 PCQNGGSCIDLVAHYLCSCPPGTLGVLCEINEDDCGPGPSLDSGLRCLHNGTCVDLVGGF 1191
Query: 100 VCSCPPGFQGLHCEGGT 116
C+CPPG+ GLHCE
Sbjct: 1192 RCNCPPGYTGLHCEADI 1208
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ GT+C + Q C+N G C C+CP GF G C+
Sbjct: 457 CICMAGFTGTFCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECAST 516
Query: 56 KCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQCLNNGTCT---APGVCSCPPGF 107
C NG C Q C+C +G++GT C + C P ++G C A C+C PG+
Sbjct: 517 PCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASFSCACAPGY 576
Query: 108 QGLHCE 113
G+ CE
Sbjct: 577 TGIRCE 582
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGCD 54
C CP GY G +C T + C P C N GTC GV C C PG+ G HC+ P
Sbjct: 912 CTCPPGYGGFHCETDLLDCSPSSCFNGGTCVD-GVNSFSCLCRPGYTGTHCQYKVDPCFS 970
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV-CSCPPGF 107
+ C +GG C+ C C +G+ G C + + C N G C G C CPP +
Sbjct: 971 RPCLHGGICNPTHSGFECTCREGFTGNQCQNPVDWCSQAPCQNGGRCVQTGAYCICPPEW 1030
Query: 108 QGLHCE 113
G C+
Sbjct: 1031 SGPLCD 1036
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 64/143 (44%), Gaps = 35/143 (24%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEG-----GP 49
+C+CP GY G C + C Q C N G+C A +CSCPPG G+ CE GP
Sbjct: 1109 VCECPTGYSGDSCEDDVDECASQPCQNGGSCIDLVAHYLCSCPPGTLGVLCEINEDDCGP 1168
Query: 50 GPGCDQ--KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTA----- 97
GP D +C + G C C CP GY G +C + C P GTC A
Sbjct: 1169 GPSLDSGLRCLHNGTCVDLVGGFRCNCPPGYTGLHCEADINECRP-----GTCHAAHTRD 1223
Query: 98 ----PG---VCSCPPGFQGLHCE 113
PG C C PGF G C+
Sbjct: 1224 CLQDPGGHFRCICLPGFTGPRCQ 1246
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAM----CFPQCLNNGTCT-APGV--CSCPPGFQGLHCEGGPGPGCD 54
C CP GYQG C + + C + GTC PG C CP G+ GL CE P
Sbjct: 146 CACPPGYQGRNCRSDIDECRAGASCRHGGTCINTPGSFHCLCPLGYTGLLCENPIVPCAP 205
Query: 55 QKCSNGGWC----DSQQMCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV----CSC 103
C NGG C D C C G++G C + +CLN GTC GV C C
Sbjct: 206 SPCRNGGTCRQSSDVTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVD-GVNTYNCQC 264
Query: 104 PPGFQGLHC 112
PP + G C
Sbjct: 265 PPEWTGQFC 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 59/132 (44%), Gaps = 23/132 (17%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG-PGPGCDQK--- 56
+C CP G+QG C + +C C G C+ PG C GG GP CDQ
Sbjct: 797 VCSCPPGWQGPRCQQDV--DECAGASPCGPHGTCTNLPGSFRCICHGGYTGPFCDQDIDD 854
Query: 57 -----CSNGGWCDS---QQMCQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVC 101
C NGG C C C G+ G C A +CL++ GTCT A C
Sbjct: 855 CDPNPCLNGGSCQDGVGSFSCSCLSGFAGPRC--ARDVDECLSSPCGPGTCTDHVASFTC 912
Query: 102 SCPPGFQGLHCE 113
+CPPG+ G HCE
Sbjct: 913 TCPPGYGGFHCE 924
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN-----GTCTAPGV---CSCPPGFQGLHCEGGPGPGC 53
C C G+ G C ++ C + GTCT+ G+ C+C PGFQG CE P
Sbjct: 720 CVCDPGWSGPRCSQSLAPDACESQPCQAGGTCTSDGIGFHCTCAPGFQGHQCEVL-SPCT 778
Query: 54 DQKCSNGGWCDSQ----QMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQG 109
C +GG C+S +C CP G+QG C + +C C G C+ PG
Sbjct: 779 PSLCEHGGHCESDPDQLTVCSCPPGWQGPRCQQDV--DECAGASPCGPHGTCTNLPGSFR 836
Query: 110 LHCEGG 115
C GG
Sbjct: 837 CICHGG 842
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTAM-CFPQ-CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGP-GCD 54
C+C +G++G C CF C + C+ C+CPPG+QG +C
Sbjct: 108 CRCLRGFRGPDCSLPDPCFSSPCAHGAPCSVGSDGRYACACPPGYQGRNCRSDIDECRAG 167
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV----CSCP 104
C +GG C + C CP GY G C + C P C N GTC C+C
Sbjct: 168 ASCRHGGTCINTPGSFHCLCPLGYTGLLCENPIVPCAPSPCRNGGTCRQSSDVTYDCACL 227
Query: 105 PGFQGLHCE 113
PGF+G +CE
Sbjct: 228 PGFEGQNCE 236
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCT---APGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+C +G++GT C + C P ++G C A C+C PG+ G+ CE Q
Sbjct: 533 CRCAEGFEGTLCERNVDDCSPDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRSQP 592
Query: 57 CSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQCLNN----GTCTAPGV----CSCPP 105
C GG C + +C+CP G G C + C +N G C G+ C C P
Sbjct: 593 CRYGGKCLDLVDKYLCRCPPGTTGVNCEVNI--DDCASNPCTFGVCRD-GINRYDCVCQP 649
Query: 106 GFQGLHC 112
GF G C
Sbjct: 650 GFTGPLC 656
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 23/138 (16%)
Query: 2 CQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV-CSCPPGFQGLHCE----------G 47
C C +G+ G C + + C N G C G C CPP + G C+
Sbjct: 988 CTCREGFTGNQCQNPVDWCSQAPCQNGGRCVQTGAYCICPPEWSGPLCDIPSLPCTEAAA 1047
Query: 48 GPGPGCDQKCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG-- 99
G +Q C GG C D C CP+G G++C + C Q C + GTC
Sbjct: 1048 HMGVRLEQLCQAGGQCIDKDHSHYCVCPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYMGG 1107
Query: 100 -VCSCPPGFQGLHCEGGT 116
VC CP G+ G CE
Sbjct: 1108 YVCECPTGYSGDSCEDDV 1125
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 49/128 (38%), Gaps = 15/128 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFP-QCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+CQC +GY G C T + C C N TC C C GF G CE
Sbjct: 418 LCQCGRGYTGPRCETDVNECLSGPCRNQATCLDRIGQFTCICMAGFTGTFCEVDIDECQS 477
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPP 105
C NGG C + C CP G+ G+ C + C N C C C
Sbjct: 478 SPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECASTPCRNGAKCVDQPDGYECRCAE 537
Query: 106 GFQGLHCE 113
GF+G CE
Sbjct: 538 GFEGTLCE 545
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 52/135 (38%), Gaps = 28/135 (20%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQCLNNGTC-----TAPGVCSCPPGFQG-------LHCEG 47
C CP G G C A C + C + +C+CPPGF G C
Sbjct: 340 CACPMGKTGLLCHLDDACVSNPCHEDAICDTNPVSGRAICTCPPGFTGGACDQDVDECSI 399
Query: 48 GPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFP-QCLNNGTCTAPG-- 99
G P C + G C + Q +CQC +GY G C T + C C N TC
Sbjct: 400 GANP-----CEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCLDRIGQ 454
Query: 100 -VCSCPPGFQGLHCE 113
C C GF G CE
Sbjct: 455 FTCICMAGFTGTFCE 469
>sp|Q8TER0|SNED1_HUMAN Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo
sapiens GN=SNED1 PE=2 SV=2
Length = 1413
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 59/132 (44%), Gaps = 21/132 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFPQ------CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPG 52
C+CP+G+ G +C A P C N GTC G CSCP F G HCE G
Sbjct: 565 CECPRGFHGKHCEKAR--PHLCSSGPCRNGGTCKEAGGEYHCSCPYRFTGRHCEIGKPDS 622
Query: 53 CDQ-KCSNGGWCDS---QQMCQCPKGYQGTYCGTA--MCFPQ-CLNNGTCTAPGV---CS 102
C C NGG C + C CP G+ G +C A CF C+N GTC C
Sbjct: 623 CASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSPCFRSPCVNGGTCEDRDTDFFCH 682
Query: 103 CPPGFQGLHCEG 114
C G+ G C+
Sbjct: 683 CQAGYMGRRCQA 694
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 1 MCQCPKGYQGTYCG---TAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGP 51
+CQCP G+ G C TAM QC + G C G +C C H P P
Sbjct: 487 LCQCPLGFFGLLCEFEITAMPCNMNTQCPDGGYCMEHGGSYLCVCHTDHNASH--SLPSP 544
Query: 52 GCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQ------CLNNGTCTAPG--- 99
C NGG CD+ C+CP+G+ G +C A P C N GTC G
Sbjct: 545 CDSDPCFNGGSCDAHDDSYTCECPRGFHGKHCEKAR--PHLCSSGPCRNGGTCKEAGGEY 602
Query: 100 VCSCPPGFQGLHCEGG 115
CSCP F G HCE G
Sbjct: 603 HCSCPYRFTGRHCEIG 618
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 22 CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ-KCSNGGWCDS---QQMCQCPKG 74
C N G+C A C CP GF G HCE C C NGG C + C CP
Sbjct: 550 CFNGGSCDAHDDSYTCECPRGFHGKHCEKARPHLCSSGPCRNGGTCKEAGGEYHCSCPYR 609
Query: 75 YQGTYCGTAM----CFPQCLNNGTC---TAPGVCSCPPGFQGLHCE 113
+ G +C C N GTC C CPPGF G HCE
Sbjct: 610 FTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCE 655
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-TAPG--VCSCPPGFQGLHCEGGPGPGCD 54
+C C GY+G +C C C N G+C PG VC CP GF G+HCE
Sbjct: 776 LCLCSTGYEGAHCELERDECRAHPCRNGGSCRNLPGAYVCRCPAGFVGVHCETEVDACDS 835
Query: 55 QKCSNGGWCDS---QQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPP 105
C +GG C+S +C CP+ + G +C T CF C G C A C+C
Sbjct: 836 SPCQHGGRCESGGGAYLCVCPESFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKV 895
Query: 106 GFQGLHC 112
G+ G C
Sbjct: 896 GYTGEDC 902
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C + C Q C N GTCT C CP GF G CE P +
Sbjct: 297 CSCLSGFTGRRCHLDVNECASQPCQNGGTCTHGINSFRCQCPAGFGGPTCETAQSPCDTK 356
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPG 106
+C +GG C + +C C GY G C + C P CLN G+C C C
Sbjct: 357 ECQHGGQCQVENGSAVCVCQAGYTGAACEMDVDDCSPDPCLNGGSCVDLVGNYTCLCAEP 416
Query: 107 FQGLHCEGG 115
F+GL CE G
Sbjct: 417 FKGLRCETG 425
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 22 CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDS---QQMCQCPKGY 75
CL+ G+C A +C C G++G HCE C NGG C + +C+CP G+
Sbjct: 762 CLHGGSCQDRVAGYLCLCSTGYEGAHCELERDECRAHPCRNGGSCRNLPGAYVCRCPAGF 821
Query: 76 QGTYCGTAMCF---PQCLNNGTCTAPG---VCSCPPGFQGLHCE 113
G +C T + C + G C + G +C CP F G HCE
Sbjct: 822 VGVHCETEVDACDSSPCQHGGRCESGGGAYLCVCPESFFGYHCE 865
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 1 MCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+C+CP G+ G +C T + C + G C + G +C CP F G HCE P
Sbjct: 814 VCRCPAGFVGVHCETEVDACDSSPCQHGGRCESGGGAYLCVCPESFFGYHCETVSDPCFS 873
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGV 100
C G+C + C C GY G C + P L GV
Sbjct: 874 SPCGGRGYCLASNGSHSCTCKVGYTGEDCAKELFPPTALKMERVEESGV 922
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 51/132 (38%), Gaps = 19/132 (14%)
Query: 1 MCQCPKGYQGTYCGTAMC---FPQCLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCD 54
CQCP G+ G C TA +C + G C VC C G+ G CE
Sbjct: 334 RCQCPAGFGGPTCETAQSPCDTKECQHGGQCQVENGSAVCVCQAGYTGAACEMDVDDCSP 393
Query: 55 QKCSNGGWCDS---QQMCQCPKGYQGTYCGT-------AMCFPQCLNNGTCTAPG---VC 101
C NGG C C C + ++G C T A C N GTC VC
Sbjct: 394 DPCLNGGSCVDLVGNYTCLCAEPFKGLRCETGDHPVPDACLSAPCHNGGTCVDADQGYVC 453
Query: 102 SCPPGFQGLHCE 113
CP GF GL C
Sbjct: 454 ECPEGFMGLDCR 465
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 50/142 (35%), Gaps = 52/142 (36%)
Query: 22 CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC--DSQQMCQCPKGYQ 76
C N GTC VC CP GF GL C C+ C NGG C + +CQCP G+
Sbjct: 438 CHNGGTCVDADQGYVCECPEGFMGLDCRERVPDDCE--CRNGGRCLGANTTLCQCPLGFF 495
Query: 77 GTYC-------------------------GTAMCF-----------------PQCLNNGT 94
G C G+ +C C N G+
Sbjct: 496 GLLCEFEITAMPCNMNTQCPDGGYCMEHGGSYLCVCHTDHNASHSLPSPCDSDPCFNGGS 555
Query: 95 CTAPG---VCSCPPGFQGLHCE 113
C A C CP GF G HCE
Sbjct: 556 CDAHDDSYTCECPRGFHGKHCE 577
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-TAPG--VCSCPP 105
Q C +GG C + +C C GY+G +C C C N G+C PG VC CP
Sbjct: 760 QPCLHGGSCQDRVAGYLCLCSTGYEGAHCELERDECRAHPCRNGGSCRNLPGAYVCRCPA 819
Query: 106 GFQGLHCE 113
GF G+HCE
Sbjct: 820 GFVGVHCE 827
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 56/135 (41%), Gaps = 21/135 (15%)
Query: 2 CQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
C CP G +G C + P CLN G C C C PGF G CEG
Sbjct: 1211 CSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLS 1270
Query: 55 QKCSNGGWCD-----SQQMCQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------V 100
CS+ G D + +C C + G +C T + PQ CLN GTC +
Sbjct: 1271 NPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFI 1330
Query: 101 CSCPPGFQGLHCEGG 115
C CPPGF G C+
Sbjct: 1331 CRCPPGFSGARCQSS 1345
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN-----GTCTAPG---VCSCPPGFQGLHCEGGPGPGC 53
CQCP GY G+YC + +C +N TC+ C C PG+QG++CE
Sbjct: 1135 CQCPLGYTGSYCEEQL--DECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQ 1192
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG---VCSC 103
+Q C NGG C + C CP G +G C + P CLN G C C C
Sbjct: 1193 NQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRC 1252
Query: 104 PPGFQGLHCEGGT 116
PGF G CEG
Sbjct: 1253 LPGFAGERCEGDI 1265
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 58/130 (44%), Gaps = 15/130 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+QG C + C + C+N+G C +C CPPGF G+ CE
Sbjct: 859 CLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLAN 918
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPG 106
C NGG C + C C G+ G C T M C + C N GTC+ C C G
Sbjct: 919 PCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAG 978
Query: 107 FQGLHCEGGT 116
F G+HCE
Sbjct: 979 FDGVHCENNI 988
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C T M C + C N GTC+ C C GF G+HCE +
Sbjct: 935 CLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTES 994
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPG 106
C NGG C + C CP G+ G++C + CLN GTC CSCP G
Sbjct: 995 SCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLG 1054
Query: 107 FQGLHCE 113
+ G +C+
Sbjct: 1055 YTGKNCQ 1061
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 2 CQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ- 55
C C G+ G C T C C N TCT C C GF G CE CD
Sbjct: 131 CTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNE-CDIP 189
Query: 56 -KCSNGGWCDS---QQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSCP 104
C +GG C + CQCP+G+ G YC + C P C+N GTC G C+C
Sbjct: 190 GHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCL 249
Query: 105 PGFQGLHCE 113
PGF+G CE
Sbjct: 250 PGFEGSTCE 258
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 25/137 (18%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ G++C + CLN GTC CSCP G+ G +C+
Sbjct: 1011 CLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRS 1070
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGT-------------AMCFPQCLNNGTCTAPG 99
C N G C ++ C CP G+ G YC + C ++G C G
Sbjct: 1071 PCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAG 1130
Query: 100 ---VCSCPPGFQGLHCE 113
C CP G+ G +CE
Sbjct: 1131 NTHYCQCPLGYTGSYCE 1147
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGC 53
MC+CP G+ G C + C C N G+C GV C C PGF G C+
Sbjct: 896 MCECPPGFSGMDCEEDIDDCLANPCQNGGSCMD-GVNTFSCLCLPGFTGDKCQTDMNECL 954
Query: 54 DQKCSNGGWCD---SQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCP 104
+ C NGG C + C+C G+ G +C + C N GTC C CP
Sbjct: 955 SEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCP 1014
Query: 105 PGFQGLHC 112
GF G C
Sbjct: 1015 VGFTGSFC 1022
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 49/113 (43%), Gaps = 19/113 (16%)
Query: 19 FPQCLNNGTCTA----PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM-----C 69
+ C+N G C G C CP GF G +C+ P +C NGG C +Q M C
Sbjct: 32 YEPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHR-DPCEKNRCQNGGTCVAQAMLGKATC 90
Query: 70 QCPKGYQGTYCGTAMCFP-----QCLNNGTCTAPGV----CSCPPGFQGLHCE 113
+C G+ G C + P CLN GTC C+C GF G C+
Sbjct: 91 RCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQ 143
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 17/129 (13%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C KG++G C + CLN GTC + C C + G +C+ P
Sbjct: 781 CTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPN 840
Query: 56 KCSNGGWCD-----SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCP 104
C N C C C G+QG C + C + C+N+G C +C CP
Sbjct: 841 PCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECP 900
Query: 105 PGFQGLHCE 113
PGF G+ CE
Sbjct: 901 PGFSGMDCE 909
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 51/127 (40%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+C KGY G C + C C N+ TC C C PGF+G+HCE
Sbjct: 442 CECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSN 501
Query: 56 KCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GVCSCPPG 106
C N G C + C CP G+ G C + CLN C C C G
Sbjct: 502 PCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATG 561
Query: 107 FQGLHCE 113
F G+ CE
Sbjct: 562 FTGVLCE 568
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPGV-----CSCPPGFQGLHCEGGPGPGC- 53
C+CP+G+ G YC +C N GTC A + C C GF G C+ C
Sbjct: 51 CKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCF 110
Query: 54 -DQKCSNGGWC----DSQQMCQCPKGYQGTYCG-TAMCFPQ-CLNNGTCTAPG---VCSC 103
+ C NGG C C C G+ G C T C C N TCT C C
Sbjct: 111 VSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGSTCTTVANQFSCKC 170
Query: 104 PPGFQGLHCE 113
GF G CE
Sbjct: 171 LTGFTGQKCE 180
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 22/133 (16%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE---GGPGPGCDQK- 56
+C CP+GY+G C + N+ C G C G HCE G GP C+
Sbjct: 400 ICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDI 457
Query: 57 -------CSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQ---CLNNGTCTAPG---V 100
C N C + C C G++G +C + Q C+NNG C
Sbjct: 458 NECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQ 517
Query: 101 CSCPPGFQGLHCE 113
C CPPGF G C+
Sbjct: 518 CLCPPGFTGPVCQ 530
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 2 CQCPKGYQGTYCGTAMC---FP-QCLNNGTC-TAPGV--CSCPPGFQGLHCEGGPGPGCD 54
C+C G+ G C T + P C + GTC PG C CP GF G +C+ P
Sbjct: 168 CKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAP 227
Query: 55 QKCSNGGWC----DSQQMCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPGV----CSC 103
C NGG C D C C G++G+ C + +C N G C GV C C
Sbjct: 228 SPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVD-GVNTYNCRC 286
Query: 104 PPGFQGLHC 112
PP + G C
Sbjct: 287 PPQWTGQFC 295
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C + F C TC A C CP G GL C
Sbjct: 324 CVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLDDA-CISN 382
Query: 56 KCSNGGWCDS-----QQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGL 110
C G CD+ Q +C CP+GY+G C + N+ C G C G
Sbjct: 383 PCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AF 440
Query: 111 HCE 113
HCE
Sbjct: 441 HCE 443
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Query: 1 MCQCPKGYQGTYCGTAMCF-PQ--CLNNGTCTAPG------VCSCPPGFQGLHCEGGPGP 51
+C C + G +C T + PQ CLN GTC +C CPPGF G C+ G
Sbjct: 1289 LCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQSSCG- 1347
Query: 52 GCDQKCSNGGWC 63
KC G C
Sbjct: 1348 --QVKCRKGEQC 1357
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVCSCPPGFQGLHCEGGPGPGCD 54
C CP+G C + + +CL+N G CT + C C G+ G++CE
Sbjct: 706 CICPEGPHHPSCYSQV--NECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLS 763
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM---CFPQCLNNGTC 95
C NGG CD+ C C KG++G C + CLN GTC
Sbjct: 764 NPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTC 810
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 50/127 (39%), Gaps = 16/127 (12%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAP---GVCSCPPGFQGLHCEGGPGPGCDQ 55
C CP G+ G C + CLN C C C GF G+ CE CD
Sbjct: 518 CLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENID-NCDP 576
Query: 56 KCSNGGWCDS---QQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPG 106
+ G C C C GY G C + C+ CLN+G C C+C PG
Sbjct: 577 DPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPG 636
Query: 107 FQGLHCE 113
G++CE
Sbjct: 637 TSGVNCE 643
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 16/87 (18%)
Query: 41 QGLHCEGGPGPGCDQKCSNGGWCDSQQ----MCQCPKGYQGTYCGTAM--CFPQCLNNGT 94
L C G P C N G C + C+CP+G+ G YC +C N GT
Sbjct: 24 HALQCRDGYEP-----CVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGT 78
Query: 95 CTAPGV-----CSCPPGFQGLHCEGGT 116
C A + C C GF G C+ T
Sbjct: 79 CVAQAMLGKATCRCASGFTGEDCQYST 105
>sp|P82279|CRUM1_HUMAN Protein crumbs homolog 1 OS=Homo sapiens GN=CRB1 PE=1 SV=2
Length = 1406
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-TAPG--VCSCPPGFQGLHCEGGPGPGCDQ 55
C CP Y G C + C+ Q CLN TC A G C C PGF G HCE Q
Sbjct: 210 CICPHNYSGVNCELEIDECWSQPCLNGATCQDALGAYFCDCAPGFLGDHCELNTDECASQ 269
Query: 56 KCSNGGWC---DSQQMCQCP-KGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPP 105
C +GG C +++ C C G+ GT+C T M C+ + C NN TC C C P
Sbjct: 270 PCLHGGLCVDGENRYSCNCTGSGFTGTHCETLMPLCWSKPCHNNATCEDSVDNYTCHCWP 329
Query: 106 GFQGLHCE 113
G+ G CE
Sbjct: 330 GYTGAQCE 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 56/131 (42%), Gaps = 15/131 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGCD 54
+C CP GY G +C C NG G+ C C PG+QG HC+
Sbjct: 133 VCICPAGYAGRFCEIDHDECASSPCQNGAVCQDGIDGYSCFCVPGYQGRHCDLEVDECAS 192
Query: 55 QKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC-TAPG--VCSCPP 105
C N C ++ C CP Y G C + C+ Q CLN TC A G C C P
Sbjct: 193 DPCKNEATCLNEIGRYTCICPHNYSGVNCELEIDECWSQPCLNGATCQDALGAYFCDCAP 252
Query: 106 GFQGLHCEGGT 116
GF G HCE T
Sbjct: 253 GFLGDHCELNT 263
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 42/103 (40%), Gaps = 19/103 (18%)
Query: 33 VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDS---QQMCQCPKG------YQGTYCGTA 83
VC C PGF G+HCE C NGG C++ C CP Y G C
Sbjct: 382 VCICQPGFTGIHCEEDVNECSSNPCQNGGTCENLPGNYTCHCPFDNLSRTFYGGRDCSDI 441
Query: 84 MC---FPQCLNNGTCTAP-------GVCSCPPGFQGLHCEGGT 116
+ QCLNNGTC C CP G+ G CE T
Sbjct: 442 LLGCTHQQCLNNGTCIPHFQDGQHGFSCLCPSGYTGSLCEIAT 484
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 33 VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM---CQCPKGYQGTYCGTAM--CFP 87
+C CPPG+ G CE G C +GG C + C CP GY G +C C
Sbjct: 95 LCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYPVCICPAGYAGRFCEIDHDECAS 154
Query: 88 QCLNNGTCTAPGV----CSCPPGFQGLHCE 113
NG G+ C C PG+QG HC+
Sbjct: 155 SPCQNGAVCQDGIDGYSCFCVPGYQGRHCD 184
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVCSCPPGFQGLHCEGGPGPGCD 54
C CP G+ G +C + +C +N G C+ A C+C PG+ G++CE
Sbjct: 1163 CSCPLGWSGKHC--ELNIDECFSNPCIHGNCSDRVAAYHCTCEPGYTGVNCEVDIDNCQS 1220
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQG----------TYCGTAMCFPQCLNNGTCT---AP 98
+C+NG C S C C + G T CG C N G CT
Sbjct: 1221 HQCANGATCISHTNGYSCLCFGNFTGKFCRQSRLPSTVCGNEKTNLTCYNGGNCTEFQTE 1280
Query: 99 GVCSCPPGFQGLHCE 113
C C PGF G CE
Sbjct: 1281 LKCMCRPGFTGEWCE 1295
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 10 GTYCGTAMCFPQCLNNGTCT---APGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCD-- 64
T CG C N G CT C C PGF G CE C NGG C
Sbjct: 1256 STVCGNEKTNLTCYNGGNCTEFQTELKCMCRPGFTGEWCEKDIDECASDPCVNGGLCQDL 1315
Query: 65 -SQQMCQCPKGYQGTYCGTAM 84
++ C C + G C +
Sbjct: 1316 LNKFQCLCDVAFAGERCEVDL 1336
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 57 CSNGGWCD---SQQMCQCPKGYQGTYCGTAMCFPQCLNN----GTCT---APGVCSCPPG 106
C +GG C+ S C CP G+ G +C + +C +N G C+ A C+C PG
Sbjct: 1148 CLHGGNCEDIYSSYHCSCPLGWSGKHC--ELNIDECFSNPCIHGNCSDRVAAYHCTCEPG 1205
Query: 107 FQGLHCE 113
+ G++CE
Sbjct: 1206 YTGVNCE 1212
>sp|G5EFX6|SLIT1_CAEEL Slit homolog 1 protein OS=Caenorhabditis elegans GN=slt-1 PE=3 SV=1
Length = 1410
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 2 CQCPKGYQGTYCGTAM--CF-PQCLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGCD 54
C C G+ G +C + C+ CLNN TC C C GF+G +CE +
Sbjct: 894 CNCTPGFYGVHCENQIDACYGSPCLNNATCKVAQAGRFNCYCNKGFEGDYCEKNIDDCVN 953
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYCGTAMCF-----PQCLNNGTCTAPG---VCSC 103
KC NGG C + C CP Y+G +C + + C NNG C C C
Sbjct: 954 SKCENGGKCVDLINSYRCDCPMEYEGKHCEDKLEYCTKKLNPCENNGKCIPINGSYSCMC 1013
Query: 104 PPGFQGLHCEGGT 116
PGF G +CE
Sbjct: 1014 SPGFTGNNCETNI 1026
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 22 CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM----CQCPK 73
C NN C C+C PGF G+HCE C N C Q C C K
Sbjct: 878 CKNNAICETTSSRKYTCNCTPGFYGVHCENQIDACYGSPCLNNATCKVAQAGRFNCYCNK 937
Query: 74 GYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEG 114
G++G YC + +C N G C C CP ++G HCE
Sbjct: 938 GFEGDYCEKNIDDCVNSKCENGGKCVDLINSYRCDCPMEYEGKHCED 984
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 57/131 (43%), Gaps = 21/131 (16%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C KG++G YC + +C N G C C CP ++G HCE C +
Sbjct: 933 CYCNKGFEGDYCEKNIDDCVNSKCENGGKCVDLINSYRCDCPMEYEGKHCEDKL-EYCTK 991
Query: 56 K---CSNGGWC---DSQQMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPGVCS---- 102
K C N G C + C C G+ G C T + +C N G+C G+ S
Sbjct: 992 KLNPCENNGKCIPINGSYSCMCSPGFTGNNCETNIDDCKNVECQNGGSC-VDGILSYDCL 1050
Query: 103 CPPGFQGLHCE 113
C PG+ G +CE
Sbjct: 1051 CRPGYAGQYCE 1061
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 4 CPKGYQGTYCGTAMCFPQC-LNNGTCTAPGVCSCPPGFQGLHCEG-GPGPGCDQKCSNGG 61
C G++G YC +C C NG C APG C C G++G C+ PGC G
Sbjct: 189 CLPGWKGDYCTEPICLSGCSEENGYCEAPGECKCRIGWEGPLCDECTRHPGCLH-----G 243
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG----VCSCPPGFQGLHCE 113
C+ C C +G+ G +C + F C N+ TCT G C C PGF G +CE
Sbjct: 244 TCNQPFQCTCKEGWGGLFCNEDLNFCTNHKPCRNDATCTNTGQGSYTCICKPGFSGKNCE 303
Query: 114 GGT 116
T
Sbjct: 304 IET 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 61/161 (37%), Gaps = 49/161 (30%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCL-----------------------------------NNG 26
C+C G++G C P CL N+
Sbjct: 220 CKCRIGWEGPLCDECTRHPGCLHGTCNQPFQCTCKEGWGGLFCNEDLNFCTNHKPCRNDA 279
Query: 27 TCTAPG----VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTY 79
TCT G C C PGF G +CE C NGG C+ Q+ C CP+G+ G
Sbjct: 280 TCTNTGQGSYTCICKPGFSGKNCEIETNECDSNPCKNGGSCNDQENDYTCTCPQGFYGKN 339
Query: 80 CG-TAMCFPQ--CLNNGTCTAPG----VCSCPPGFQGLHCE 113
C +AM C N GTC G C CPPG+ G +CE
Sbjct: 340 CEVSAMTCADGPCFNGGTCMEKGSGSYSCRCPPGYMGSNCE 380
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 50/127 (39%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+CP GY G+ C + C N G C G C C PGF G CE
Sbjct: 368 CRCPPGYMGSNCEKKIDRCSSDPCANGGQCLDLGNKATCRCRPGFTGSRCETNIDDCSSN 427
Query: 56 KCSNGGWC---DSQQMCQCPKGYQGTYCGT---AMCFPQCLNNGTCTAPG---VCSCPPG 106
C N G C + C C G+ G C A F C N GTC VC CP G
Sbjct: 428 PCQNAGTCVDGINGYTCTCTLGFSGKDCRVRSDACSFMPCQNGGTCYTHFSGPVCQCPAG 487
Query: 107 FQGLHCE 113
F G CE
Sbjct: 488 FMGTQCE 494
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 2 CQCPKGYQGTYCG--TAMCFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C C G+ G C T C C N G+C C+CP GF G +CE D
Sbjct: 291 CICKPGFSGKNCEIETNECDSNPCKNGGSCNDQENDYTCTCPQGFYGKNCEVSAMTCADG 350
Query: 56 KCSNGGWCDSQ----QMCQCPKGYQGTYCGTAM---CFPQCLNNGTCTAPG---VCSCPP 105
C NGG C + C+CP GY G+ C + C N G C G C C P
Sbjct: 351 PCFNGGTCMEKGSGSYSCRCPPGYMGSNCEKKIDRCSSDPCANGGQCLDLGNKATCRCRP 410
Query: 106 GFQGLHCE 113
GF G CE
Sbjct: 411 GFTGSRCE 418
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 4 CPKGYQGTYCGTAMCFPQ--CLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCS-NG 60
C + Y G C + C P+ + C A G C PG++G +C P C CS
Sbjct: 156 CDEFYHGEEC-SDFCRPRNDTFGHFNCDAAGNRICLPGWKGDYC---TEPICLSGCSEEN 211
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G+C++ C+C G++G C P CL +GTC P C+C G+ GL C
Sbjct: 212 GYCEAPGECKCRIGWEGPLCDECTRHPGCL-HGTCNQPFQCTCKEGWGGLFC 262
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 63 CDSQQMCQCPKGYQGTYCGTAMCFPQC-LNNGTCTAPGVCSCPPGFQGLHCE 113
CD+ C G++G YC +C C NG C APG C C G++G C+
Sbjct: 181 CDAAGNRICLPGWKGDYCTEPICLSGCSEENGYCEAPGECKCRIGWEGPLCD 232
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCD 54
+C+C GY G+YC + C P C N TCT C C PG+ G++C
Sbjct: 1128 LCRCQAGYTGSYCQEQVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLS 1187
Query: 55 QKCSNGGWCD---SQQMCQCPKGYQGTYCGTAMC-----------FPQCLNNGTCTAPG- 99
Q C NGG C + C CP+G QG +C + P+C N G C
Sbjct: 1188 QPCQNGGTCIDLVNTYKCSCPRGTQGVHCEIDIDDCSPSVDPLTGEPRCFNGGRCVDRVG 1247
Query: 100 --VCSCPPGFQGLHCEGGT 116
C CP GF G CEG
Sbjct: 1248 GYGCVCPAGFVGERCEGDV 1266
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 58/133 (43%), Gaps = 21/133 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCS---------CPPGFQGLHCEGGPGPG 52
C CP G+QG C + +C+ N CT GVC C PGF G CE
Sbjct: 853 CNCPAGWQGQTCEVDI--NECVRN-PCTNGGVCENLRGGFQCRCNPGFTGALCENDIDDC 909
Query: 53 CDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSC 103
CSNGG C + +C C G++G C + C N G CT CSC
Sbjct: 910 EPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAPCRNGGNCTDCVNSYTCSC 969
Query: 104 PPGFQGLHCEGGT 116
P GF G++CE T
Sbjct: 970 PAGFSGINCEINT 982
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 55/126 (43%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C+CPKG+ G+ C + C N CT C C PGF G+HCE
Sbjct: 512 CECPKGFSGSLCQVDVDECASTPCKNGAKCTDGPNKYTCECTPGFSGIHCELDINECASS 571
Query: 56 KCSNGGWCD--SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGF 107
C G D + C C GY G C T + C Q C N GTC +C+CP G
Sbjct: 572 PCHYGVCRDGVASFTCDCRPGYTGRLCETNINECLSQPCRNGGTCQDRENAYICTCPKGT 631
Query: 108 QGLHCE 113
G++CE
Sbjct: 632 TGVNCE 637
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+C +GY+G C + C C N+ TC C C PG++G+ C+ Q
Sbjct: 437 CKCLQGYEGPRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGYEGVFCQINSDDCASQ 496
Query: 56 KCSNGGWCDSQQ--MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGF 107
C NG D C+CPKG+ G+ C + C N CT C C PGF
Sbjct: 497 PCLNGKCIDKINSFHCECPKGFSGSLCQVDVDECASTPCKNGAKCTDGPNKYTCECTPGF 556
Query: 108 QGLHCE 113
G+HCE
Sbjct: 557 SGIHCE 562
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 53/134 (39%), Gaps = 21/134 (15%)
Query: 1 MCQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPG------VCSCPPGFQGLHCEGGPGP 51
C+C GY G C T C N GTC +C C PG+ G CE
Sbjct: 1290 RCECRTGYTGKRCETVFNGCKDTPCKNGGTCAVASNTKHGYICKCQPGYSGSSCEYDSQS 1349
Query: 52 GCDQKCSNGGWCDSQQM---CQCPKGYQGTYCGTAMCFP----QCLNNGTC----TAPGV 100
+C NG C S + C C G+ G C T M P C N GTC AP
Sbjct: 1350 CGSLRCRNGATCVSGHLSPRCLCAPGFSGHECQTRMDSPCLVNPCYNGGTCQPISDAPFY 1409
Query: 101 -CSCPPGFQGLHCE 113
CSCP F GL C
Sbjct: 1410 RCSCPANFNGLLCH 1423
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 2 CQCPKGYQGTYCGTAMCF-----------PQCLNNGTCTAPGV---CSCPPGFQGLHCEG 47
C CP+G QG +C + P+C N G C C CP GF G CEG
Sbjct: 1205 CSCPRGTQGVHCEIDIDDCSPSVDPLTGEPRCFNGGRCVDRVGGYGCVCPAGFVGERCEG 1264
Query: 48 GPGPGCDQKCSNGGWCDSQQM-----CQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPG 99
C G + Q+ C+C GY G C T C N GTC
Sbjct: 1265 DVNECLSDPCDPSGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGTCAVAS 1324
Query: 100 ------VCSCPPGFQGLHCE 113
+C C PG+ G CE
Sbjct: 1325 NTKHGYICKCQPGYSGSSCE 1344
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 1 MCQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD 54
+C C G++G C + C N G CT CSCP GF G++CE +
Sbjct: 928 VCVCLAGFRGERCAEDIDECVSAPCRNGGNCTDCVNSYTCSCPAGFSGINCEINTPDCTE 987
Query: 55 QKCSNGGWC---DSQQMCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTA---PGVCSCPP 105
C NGG C S C C G+ G YC C + C N G+C C+CP
Sbjct: 988 SSCFNGGTCVDGISSFSCVCLPGFTGNYCQHDVNECDSRPCQNGGSCQDGYGTYKCTCPH 1047
Query: 106 GFQGLHCEG 114
G+ GL+C+
Sbjct: 1048 GYTGLNCQS 1056
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 57/134 (42%), Gaps = 27/134 (20%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTCTA---PGVCSCPPGFQGL-------HCEGGP 49
C+C G+ G C A C N G C+A +C+CPP F G C P
Sbjct: 126 CRCQPGWSGKTCQLADPCASNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNECAVSP 185
Query: 50 GPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG---- 99
P C NGG C ++ +C+CP Y G +C C P C + GTC
Sbjct: 186 SP-----CRNGGTCINEVGSYLCRCPPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTH 240
Query: 100 VCSCPPGFQGLHCE 113
CSC PGF G CE
Sbjct: 241 TCSCLPGFTGQTCE 254
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 52/137 (37%), Gaps = 25/137 (18%)
Query: 2 CQCPKGYQGTYCGT-------------AMCFPQCLNNGTCTAPG---VCSCPPGFQGLHC 45
CQC G+ G YC C + G C G +C C G+ G +C
Sbjct: 1081 CQCASGWTGIYCDVPSVSCEVAARQQGVSVAVLCRHAGQCVDAGNTHLCRCQAGYTGSYC 1140
Query: 46 EGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA-- 97
+ C NG C C+C GY G C + C Q C N GTC
Sbjct: 1141 QEQVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLSQPCQNGGTCIDLV 1200
Query: 98 -PGVCSCPPGFQGLHCE 113
CSCP G QG+HCE
Sbjct: 1201 NTYKCSCPRGTQGVHCE 1217
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 2 CQCPKGYQGTYCGTAMCFP----QCLNNGTCTAPGV----CSCPPGFQGLHCEGGPGPGC 53
C C G+ C T + C N GTC+ + C C PG+ G C+ P
Sbjct: 86 CDCVLGFSDRLCLTPVNHACMNSPCRNGGTCSLLTLDTFTCRCQPGWSGKTCQLA-DPCA 144
Query: 54 DQKCSNGGWC---DSQQMCQCPKGYQGTYCGT-----AMCFPQCLNNGTCTAPG---VCS 102
C+NGG C +S +C CP + G C A+ C N GTC +C
Sbjct: 145 SNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNECAVSPSPCRNGGTCINEVGSYLCR 204
Query: 103 CPPGFQGLHCE 113
CPP + G HC+
Sbjct: 205 CPPEYTGPHCQ 215
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 2 CQCPKGYQGTYCGTAM--CFPQCLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCDQK 56
C+C G+ G +C + C + G C A C C PG+ G CE Q
Sbjct: 550 CECTPGFSGIHCELDINECASSPCHYGVCRDGVASFTCDCRPGYTGRLCETNINECLSQP 609
Query: 57 CSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQCLNNGTCTAPG---VCSCPPGFQ 108
C NGG C ++ +C CPKG G C + C + + G C C C PG+
Sbjct: 610 CRNGGTCQDRENAYICTCPKGTTGVNCEINIDDCKRKPCDYGKCIDKINGYECVCEPGYS 669
Query: 109 GLHC 112
G C
Sbjct: 670 GSMC 673
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG----VCSCPPGFQGLHCEGGPGPGC 53
+C+CP Y G +C C P C + GTC CSC PGF G CE
Sbjct: 202 LCRCPPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQTCEHNVDDCT 261
Query: 54 DQKCSNGGWC---DSQQMCQCPKGYQGTYC 80
C NGG C + C C K + G YC
Sbjct: 262 QHACENGGPCIDGINTYNCHCDKHWTGQYC 291
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 53/130 (40%), Gaps = 17/130 (13%)
Query: 1 MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGFQGLHCEGGPGPGCD 54
C C G+ G C + C C+N GTC T+ +C+C GF G +C+
Sbjct: 736 RCVCEAGWMGRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAGFSGPNCQMNINECAS 795
Query: 55 QKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTAPG-----VCSC 103
C N G C C C Y G C + C P+ C N G C C+C
Sbjct: 796 NPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPCSPRPCKNGGVCRESEDFQSFSCNC 855
Query: 104 PPGFQGLHCE 113
P G+QG CE
Sbjct: 856 PAGWQGQTCE 865
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 51/126 (40%), Gaps = 14/126 (11%)
Query: 2 CQCPKGYQGTYCGTAM---CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G+ C + C N GTC C CP GF+ C
Sbjct: 662 CVCEPGYSGSMCNINIDDCALNPCHNGGTCIDGVNSFTCLCPDGFRDATCLSQHNECSSN 721
Query: 56 KCSNGGWCD--SQQMCQCPKGYQGTYCGTAM--CFPQ-CLNNGTC---TAPGVCSCPPGF 107
C +G D + C C G+ G C + C C+N GTC T+ +C+C GF
Sbjct: 722 PCIHGSCLDQINSYRCVCEAGWMGRNCDININECLSNPCVNGGTCKDMTSGYLCTCRAGF 781
Query: 108 QGLHCE 113
G +C+
Sbjct: 782 SGPNCQ 787
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 34/139 (24%)
Query: 1 MCQCPKGYQGTYCGTAMCFPQCLNN----------GTCTAPGVCSCPPGFQGL------- 43
C+CP G G C C++N + +C+CPPG+ G
Sbjct: 357 FCECPHGRTGLLCHLD---DACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDID 413
Query: 44 HCEGGPGPGCDQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAM--CFPQ-CLNNGTCTA 97
C G P C +GG C + + C+C +GY+G C + C C N+ TC
Sbjct: 414 ECSLGANP-----CEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLD 468
Query: 98 PG---VCSCPPGFQGLHCE 113
C C PG++G+ C+
Sbjct: 469 QIGGFHCICMPGYEGVFCQ 487
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 24/132 (18%)
Query: 2 CQCPKGYQGTYCGT-----AMCFPQCLNNGTC--TAPGV-CSCPPGFQGLHCEGGPGPGC 53
C C K + G YC + C N GTC T G C C G+ G C
Sbjct: 280 CHCDKHWTGQYCTEDVDECELSPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCA 339
Query: 54 DQKCSNGGWCDSQQ---MCQCPKGYQGTYCGTAMCFPQCLNN----------GTCTAPGV 100
CS+G C + C+CP G G C C++N + +
Sbjct: 340 SAACSHGATCHDRVASFFCECPHGRTGLLCHLD---DACISNPCQKGSNCDTNPVSGKAI 396
Query: 101 CSCPPGFQGLHC 112
C+CPPG+ G C
Sbjct: 397 CTCPPGYTGSAC 408
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 43/116 (37%), Gaps = 20/116 (17%)
Query: 17 MCFPQCLNNGTC----TAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQM---- 68
C C N G C + C CP F G C+ P P C NGG C Q
Sbjct: 24 RCSEYCQNGGICEYKPSGEASCRCPADFVGAQCQ-FPNPCNPSPCRNGGVCRPQMQGNEV 82
Query: 69 ---CQCPKGYQGTYCGTAMCFP----QCLNNGTCTAPGV----CSCPPGFQGLHCE 113
C C G+ C T + C N GTC+ + C C PG+ G C+
Sbjct: 83 GVKCDCVLGFSDRLCLTPVNHACMNSPCRNGGTCSLLTLDTFTCRCQPGWSGKTCQ 138
>sp|O00548|DLL1_HUMAN Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=2 SV=2
Length = 723
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQK-CSNG 60
C+C G+QG YC + +P CL +GTC P C+C G+ GL C K C NG
Sbjct: 243 CKCRVGWQGRYCDECIRYPGCL-HGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNG 301
Query: 61 GWCDS----QQMCQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTA---PGVCSCPPGFQGL 110
C + C C GY G C G C P C N G+CT C+CPPGF G
Sbjct: 302 ATCTNTGQGSYTCSCRPGYTGATCELGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGK 361
Query: 111 HCE 113
CE
Sbjct: 362 ICE 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 55/131 (41%), Gaps = 16/131 (12%)
Query: 2 CQCPKGYQGTYC--GTAMCFPQ-CLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ 55
C C GY G C G C P C N G+CT C+CPPGF G CE D
Sbjct: 314 CSCRPGYTGATCELGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSAMTCADG 373
Query: 56 KCSNGGWC----DSQQMCQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPG---VCSCPP 105
C NGG C D C+CP GY G C + + C N C G +C C
Sbjct: 374 PCFNGGRCSDSPDGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCQA 433
Query: 106 GFQGLHCEGGT 116
GF G HC+
Sbjct: 434 GFSGRHCDDNV 444
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 4 CPKGYQGTYCGTAMCFPQCLN-NGTCTAPGVCSCPPGFQGLHCEG-GPGPGCDQKCSNGG 61
C G++G YC +C P C +G C PG C C G+QG +C+ PGC G
Sbjct: 212 CNPGWKGPYCTEPICLPGCDEQHGFCDKPGECKCRVGWQGRYCDECIRYPGCLH-----G 266
Query: 62 WCDSQQMCQCPKGYQGTYCGTAMCF----PQCLNNGTCTAPG----VCSCPPGFQGLHCE 113
C C C +G+ G +C + + C N TCT G CSC PG+ G CE
Sbjct: 267 TCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGATCE 326
Query: 114 GGT 116
G
Sbjct: 327 LGI 329
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 8/112 (7%)
Query: 4 CPKGYQGTYCGTAMCFPQ--CLNNGTCTAPGVCSCPPGFQGLHC-EGGPGPGCDQKCSNG 60
C + Y G C + C P+ + TC G C PG++G +C E PGCD++
Sbjct: 179 CDEHYYGEGC-SVFCRPRDDAFGHFTCGERGEKVCNPGWKGPYCTEPICLPGCDEQ---H 234
Query: 61 GWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112
G+CD C+C G+QG YC + +P CL +GTC P C+C G+ GL C
Sbjct: 235 GFCDKPGECKCRVGWQGRYCDECIRYPGCL-HGTCQQPWQCNCQEGWGGLFC 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 2 CQCPKGYQGTYCGTAMCF---PQCLNNGTCTAPG---VCSCPPGFQGLHCEGGPGPGCDQ 55
C+CP GY G C + + C N C G +C C GF G HC+
Sbjct: 391 CRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDDNVDDCASS 450
Query: 56 KCSNGGWCD---SQQMCQCPKGYQGTYCGTAMC---FPQCLNNGTCTAPG---VCSCPPG 106
C+NGG C + C CP GY G C + C N TC G VC C G
Sbjct: 451 PCANGGTCRDGVNDFSCTCPPGYTGRNCSAPVSRCEHAPCHNGATCHERGHRYVCECARG 510
Query: 107 FQGLHCE 113
+ G +C+
Sbjct: 511 YGGPNCQ 517
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.144 0.563
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,290,679
Number of Sequences: 539616
Number of extensions: 2734679
Number of successful extensions: 14442
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 600
Number of HSP's that attempted gapping in prelim test: 5563
Number of HSP's gapped (non-prelim): 4124
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)