Query psy6687
Match_columns 116
No_of_seqs 173 out of 1964
Neff 11.2
Searched_HMMs 29240
Date Sat Aug 17 00:30:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6687.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6687hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.9 3.6E-23 1.2E-27 130.3 7.2 111 1-114 166-276 (324)
2 2ygq_A WIF-1, WNT inhibitory f 99.9 5E-23 1.7E-27 129.7 4.2 112 1-115 198-309 (324)
3 2vj2_A Jagged-1; signalling, p 99.8 3.8E-20 1.3E-24 107.2 5.2 109 1-114 51-169 (169)
4 3fcs_B Integrin beta-3; beta p 99.8 7.7E-19 2.6E-23 119.3 7.6 110 2-114 460-600 (690)
5 2vj3_A Neurogenic locus notch 99.7 2.3E-18 7.9E-23 96.4 5.5 96 20-115 13-120 (135)
6 2vj2_A Jagged-1; signalling, p 99.7 2.1E-18 7.3E-23 99.8 4.0 109 1-114 18-129 (169)
7 4d90_A EGF-like repeat and dis 99.7 8E-17 2.7E-21 90.9 7.6 95 21-115 7-134 (143)
8 3k6s_B Integrin beta-2; cell r 99.7 1.7E-17 5.7E-22 112.6 5.2 111 1-114 447-592 (687)
9 3fcs_B Integrin beta-3; beta p 99.7 1.4E-16 5E-21 108.3 8.7 107 1-114 505-628 (690)
10 2gy5_A Angiopoietin-1 receptor 99.7 6.4E-16 2.2E-20 100.4 8.7 112 2-115 187-321 (423)
11 1z1y_A Ookinete surface protei 99.5 7.6E-17 2.6E-21 94.6 -3.8 114 1-114 26-175 (186)
12 4d90_A EGF-like repeat and dis 99.5 1.7E-14 5.9E-19 81.3 5.3 82 2-83 25-134 (143)
13 2bou_A EGF-like module contain 99.5 9.3E-15 3.2E-19 82.4 2.7 96 17-113 4-133 (143)
14 2vj3_A Neurogenic locus notch 99.5 1.6E-14 5.3E-19 80.8 3.5 82 1-82 29-119 (135)
15 1tpg_A T-plasminogen activator 99.5 3.7E-14 1.3E-18 74.1 3.2 78 32-116 2-88 (91)
16 3k6s_B Integrin beta-2; cell r 99.4 1.3E-13 4.3E-18 93.9 5.6 94 1-96 494-607 (687)
17 2p28_B Integrin beta-2; hybrid 99.4 9.7E-14 3.3E-18 82.9 3.4 92 21-115 97-215 (217)
18 1tpg_A T-plasminogen activator 99.3 8.7E-13 3E-17 68.9 3.3 78 1-83 3-87 (91)
19 2wg3_C Hedgehog-interacting pr 99.3 6.6E-13 2.3E-17 87.4 0.4 79 33-115 378-456 (463)
20 2wg3_C Hedgehog-interacting pr 99.2 2E-12 6.8E-17 85.1 0.9 78 2-83 379-456 (463)
21 2p28_B Integrin beta-2; hybrid 99.2 2.1E-12 7.2E-17 77.2 0.6 80 1-82 108-214 (217)
22 2gy5_A Angiopoietin-1 receptor 99.2 3.4E-11 1.2E-15 78.4 5.7 83 1-83 217-321 (423)
23 1yo8_A Thrombospondin-2; EGF, 99.2 9.4E-12 3.2E-16 84.2 2.8 92 21-113 10-145 (634)
24 1z1y_A Ookinete surface protei 99.1 5.2E-13 1.8E-17 78.3 -3.8 87 21-109 12-126 (186)
25 4fbr_A Lectin, myxobacterial h 99.1 1.3E-13 4.6E-18 84.1 -8.4 98 8-116 24-137 (267)
26 4fbr_A Lectin, myxobacterial h 99.1 7.5E-14 2.6E-18 85.2 -10.4 104 1-115 54-203 (267)
27 2bou_A EGF-like module contain 98.9 1E-10 3.4E-15 65.8 -0.1 81 1-81 20-133 (143)
28 3u7u_G Neuregulin 1; signaling 98.7 6.1E-09 2.1E-13 48.9 1.9 29 87-115 14-50 (55)
29 1yo8_A Thrombospondin-2; EGF, 98.7 3.4E-08 1.2E-12 67.1 5.8 81 1-81 26-145 (634)
30 1dx5_I Thrombomodulin; serine 98.7 4.1E-10 1.4E-14 61.4 -3.0 76 31-110 23-111 (118)
31 1x7a_L Coagulation factor IX, 98.6 2.8E-08 9.5E-13 56.0 2.5 64 48-113 47-125 (146)
32 4aqs_A Laminin subunit beta-1; 98.6 5.9E-08 2E-12 65.0 4.4 82 32-114 418-525 (525)
33 1aut_L Activated protein C; se 98.5 1.2E-07 4.1E-12 51.2 4.0 76 18-96 18-107 (114)
34 2c4f_L Coagulation factor VII 98.5 2.4E-08 8.1E-13 56.1 0.8 66 48-113 46-128 (142)
35 3u7u_G Neuregulin 1; signaling 98.5 6.3E-08 2.1E-12 45.5 2.0 42 42-83 1-50 (55)
36 1emn_A Fibrillin; extracellula 98.5 1.5E-07 5.1E-12 47.9 3.2 43 67-110 26-76 (82)
37 1aut_L Activated protein C; se 98.4 2.4E-07 8.2E-12 50.1 4.0 51 57-109 22-85 (114)
38 1dx5_I Thrombomodulin; serine 98.4 1.5E-08 5.2E-13 55.1 -0.9 75 1-78 25-111 (118)
39 1z6c_A Vitamin K-dependent pro 98.4 2.3E-07 7.8E-12 47.7 3.1 10 32-41 25-34 (87)
40 1nfu_B Coagulation factor XA, 98.4 2.4E-08 8.1E-13 58.8 -0.7 58 49-108 42-111 (195)
41 1nfu_B Coagulation factor XA, 98.4 2.4E-08 8.4E-13 58.7 -1.3 74 16-92 43-130 (195)
42 3ca7_A Protein spitz; argos, E 98.4 1.9E-08 6.4E-13 46.9 -1.5 38 68-114 4-48 (52)
43 3h5c_B Vitamin K-dependent pro 98.4 8.1E-07 2.8E-11 55.9 5.4 56 21-78 12-76 (317)
44 3h5c_B Vitamin K-dependent pro 98.3 1.5E-06 5E-11 54.7 6.2 60 49-110 5-76 (317)
45 1emn_A Fibrillin; extracellula 98.3 3.5E-07 1.2E-11 46.5 2.5 56 21-79 13-77 (82)
46 1klo_A Laminin; glycoprotein; 98.3 4.8E-07 1.6E-11 51.8 3.3 52 62-113 69-145 (162)
47 2w2n_E LDL receptor, low-densi 98.3 2.9E-07 1E-11 49.2 2.2 66 6-76 20-98 (107)
48 2vh0_B Activated factor XA lig 98.3 5.3E-08 1.8E-12 54.1 -0.7 64 48-113 41-120 (134)
49 4aqs_A Laminin subunit beta-1; 98.3 3.1E-07 1.1E-11 61.5 2.6 79 3-81 422-524 (525)
50 1a3p_A Epidermal growth factor 98.3 4.8E-07 1.6E-11 40.7 2.0 28 88-115 10-42 (45)
51 2ygo_A WIF-1, WNT inhibitory f 98.3 1.1E-06 3.8E-11 50.9 4.0 37 78-114 144-180 (188)
52 1edm_B Factor IX; epidermal gr 98.2 1.4E-06 4.7E-11 37.9 3.4 27 87-113 9-38 (39)
53 2c4f_L Coagulation factor VII 98.2 2.5E-07 8.5E-12 51.9 0.9 62 20-81 53-128 (142)
54 1x7a_L Coagulation factor IX, 98.2 5.7E-07 1.9E-11 50.7 2.3 62 17-81 50-125 (146)
55 2vh0_B Activated factor XA lig 98.2 9.4E-08 3.2E-12 53.1 -1.0 63 17-81 44-120 (134)
56 1egf_A Epidermal growth factor 98.2 1.9E-06 6.6E-11 40.1 3.4 28 88-115 13-45 (53)
57 1lmj_A Fibrillin 1; EGF, calci 98.1 4.5E-07 1.5E-11 46.5 0.4 43 67-110 25-79 (86)
58 1edm_B Factor IX; epidermal gr 98.1 3.3E-06 1.1E-10 36.7 2.6 32 50-81 4-38 (39)
59 2ygo_A WIF-1, WNT inhibitory f 98.1 4.5E-06 1.6E-10 48.4 3.8 34 13-46 146-179 (188)
60 1hae_A Heregulin-alpha; growth 98.0 1.5E-06 5.1E-11 41.9 1.1 27 87-113 12-46 (63)
61 1uzk_A Fibrillin-1; glycoprote 98.0 1.8E-07 6E-12 53.6 -2.7 29 82-111 122-156 (162)
62 2w86_A Fibrillin-1, fibrillin1 98.0 5.9E-08 2E-12 54.7 -5.2 44 67-111 88-141 (147)
63 1klo_A Laminin; glycoprotein; 97.9 2E-06 6.8E-11 49.2 0.8 80 2-81 20-145 (162)
64 1k36_A Epiregulin; EGF-like fo 97.9 5.6E-06 1.9E-10 37.3 2.1 28 87-115 12-44 (46)
65 3ca7_A Protein spitz; argos, E 97.9 6.1E-07 2.1E-11 41.7 -1.4 14 33-46 34-47 (52)
66 1nql_B Epidermal growth factor 97.8 3.2E-06 1.1E-10 39.4 0.3 28 87-114 12-44 (53)
67 1egf_A Epidermal growth factor 97.8 1.8E-05 6.2E-10 36.7 2.7 27 56-82 13-44 (53)
68 1z6c_A Vitamin K-dependent pro 97.8 6.6E-06 2.3E-10 42.2 1.0 45 67-114 25-78 (87)
69 2w2n_E LDL receptor, low-densi 97.7 4.4E-06 1.5E-10 44.6 0.1 68 37-110 19-100 (107)
70 3zyj_B Netrin-G1; cell adhesio 97.7 2E-05 6.8E-10 51.4 2.3 81 32-114 313-398 (426)
71 1a3p_A Epidermal growth factor 97.7 3.3E-05 1.1E-09 34.6 2.4 27 56-82 10-41 (45)
72 1hae_A Heregulin-alpha; growth 97.6 2.8E-05 9.5E-10 37.4 2.0 32 21-52 13-52 (63)
73 1k36_A Epiregulin; EGF-like fo 97.6 3.6E-05 1.2E-09 34.6 1.8 16 67-82 28-43 (46)
74 1lmj_A Fibrillin 1; EGF, calci 97.5 3.3E-06 1.1E-10 43.2 -2.0 54 22-78 13-79 (86)
75 3zyj_B Netrin-G1; cell adhesio 97.5 4.6E-05 1.6E-09 49.8 2.1 94 2-106 315-419 (426)
76 2k2s_B Micronemal protein 6; m 97.4 4.9E-05 1.7E-09 36.3 1.0 27 87-113 17-49 (61)
77 2e26_A Reelin, reeler protein; 97.4 2.2E-05 7.4E-10 54.2 -0.4 45 3-48 521-566 (725)
78 3ltf_D Protein spitz; receptor 97.4 5.4E-05 1.9E-09 35.8 1.1 27 88-114 15-48 (58)
79 3p5b_L Low density lipoprotein 97.2 0.00024 8.1E-09 46.1 2.8 52 24-78 10-71 (400)
80 1nql_B Epidermal growth factor 97.1 0.00012 4.1E-09 33.9 0.6 28 20-47 12-44 (53)
81 2e26_A Reelin, reeler protein; 97.1 6.5E-05 2.2E-09 51.9 -0.7 43 70-113 521-564 (725)
82 2k2s_B Micronemal protein 6; m 97.0 5E-05 1.7E-09 36.3 -1.1 32 50-81 12-49 (61)
83 3v65_B Low-density lipoprotein 96.9 0.00018 6.1E-09 46.4 0.7 47 27-76 16-73 (386)
84 1n7d_A LDL receptor, low-densi 96.9 0.011 3.7E-07 41.2 9.3 41 67-109 315-364 (699)
85 1g1s_A P-selectin; selectin, l 96.8 0.00012 4.1E-09 41.6 -0.8 33 83-115 120-156 (162)
86 3e50_C Protransforming growth 96.8 0.0012 4E-08 30.1 2.6 27 87-114 14-45 (50)
87 3ltf_D Protein spitz; receptor 96.7 0.00055 1.9E-08 32.3 1.3 27 21-47 15-48 (58)
88 3p5b_L Low density lipoprotein 96.6 0.0016 5.3E-08 42.3 3.0 41 67-109 21-70 (400)
89 1iox_A Betacellulin; EGF-like 96.6 0.00048 1.6E-08 31.4 0.4 26 88-114 15-45 (50)
90 2p26_A Integrin beta-2; hybrid 96.5 0.00093 3.2E-08 41.5 1.5 55 57-113 198-274 (280)
91 1uzk_A Fibrillin-1; glycoprote 96.4 0.00015 5.1E-09 41.3 -2.1 81 20-110 10-113 (162)
92 2p26_A Integrin beta-2; hybrid 96.4 0.0016 5.4E-08 40.5 2.1 52 22-75 198-262 (280)
93 2w86_A Fibrillin-1, fibrillin1 96.4 0.00014 4.8E-09 40.8 -2.5 46 32-79 88-141 (147)
94 2fd6_A Urokinase-type plasmino 96.3 0.0033 1.1E-07 34.2 2.9 56 21-82 2-63 (122)
95 2fd6_A Urokinase-type plasmino 96.3 0.0038 1.3E-07 33.9 3.1 41 2-46 21-62 (122)
96 1xdt_R Hbegf, heparin-binding 96.2 0.0015 5E-08 32.7 1.1 28 87-115 46-78 (79)
97 2rnl_A Amphiregulin; AR, color 96.2 0.0043 1.5E-07 28.2 2.4 27 87-114 18-49 (50)
98 1g1t_A E-selectin; EGF, adhesi 96.1 0.00035 1.2E-08 39.4 -1.7 30 87-116 125-157 (157)
99 2i9a_A Urokinase-type plasmino 95.9 0.0032 1.1E-07 35.3 1.5 51 56-113 14-74 (145)
100 3cfw_A L-selectin; EGF, cell a 95.7 0.0033 1.1E-07 35.7 1.2 29 87-115 125-156 (164)
101 3v65_B Low-density lipoprotein 95.7 0.0033 1.1E-07 40.5 1.3 40 67-108 24-73 (386)
102 3m0c_C LDL receptor, low-densi 95.6 0.0079 2.7E-07 42.5 2.8 41 67-109 333-382 (791)
103 1n7d_A LDL receptor, low-densi 95.5 0.039 1.3E-06 38.5 6.1 44 31-77 314-364 (699)
104 1g1s_A P-selectin; selectin, l 95.4 0.0035 1.2E-07 35.4 0.5 33 51-83 121-156 (162)
105 3nt1_A Prostaglandin-endoperox 95.0 0.011 3.7E-07 40.5 2.0 32 51-82 3-39 (587)
106 1q4g_A Prostaglandin G/H synth 94.7 0.0085 2.9E-07 40.7 0.9 30 52-81 5-39 (553)
107 3m0c_C LDL receptor, low-densi 94.0 0.061 2.1E-06 38.2 3.9 48 27-77 325-382 (791)
108 3nt1_A Prostaglandin-endoperox 93.5 0.038 1.3E-06 37.9 2.2 28 20-47 7-39 (587)
109 3cfw_A L-selectin; EGF, cell a 93.1 0.026 8.9E-07 31.9 0.8 32 55-86 125-160 (164)
110 1g1t_A E-selectin; EGF, adhesi 92.8 0.011 3.6E-07 33.2 -1.1 30 54-83 124-156 (157)
111 1q4g_A Prostaglandin G/H synth 92.2 0.047 1.6E-06 37.2 1.2 28 20-47 8-40 (553)
112 2i9a_A Urokinase-type plasmino 91.5 0.12 3.9E-06 29.0 2.1 29 21-49 14-48 (145)
113 3g5c_A ADAM 22; alpha/beta fol 91.2 0.12 4E-06 35.0 2.2 27 88-114 455-481 (510)
114 3asi_A Neurexin-1-alpha; beta- 89.8 0.22 7.4E-06 32.4 2.5 31 84-114 187-222 (410)
115 3qcw_A Neurexin-1-alpha; synap 89.7 0.24 8.3E-06 36.9 3.0 32 84-115 1019-1055(1245)
116 3asi_A Neurexin-1-alpha; beta- 89.7 0.21 7.3E-06 32.5 2.5 38 45-82 181-222 (410)
117 4aqt_A Laminin subunit gamma-1 89.0 0.11 3.6E-06 33.8 0.6 16 32-47 272-287 (375)
118 2y38_A Laminin subunit alpha-5 86.8 1 3.5E-05 29.6 4.2 14 33-46 287-300 (403)
119 2ddu_A Reelin; beta-jelly-roll 85.8 0.1 3.5E-06 33.9 -0.8 27 84-111 193-219 (387)
120 3qcw_A Neurexin-1-alpha; synap 84.7 0.56 1.9E-05 35.1 2.5 39 45-83 1013-1055(1245)
121 2ddu_A Reelin; beta-jelly-roll 81.4 0.33 1.1E-05 31.6 0.3 27 17-44 193-219 (387)
122 3g5c_A ADAM 22; alpha/beta fol 81.0 1 3.5E-05 30.5 2.5 29 55-83 454-482 (510)
123 1gl4_A Nidogen-1, entactin; im 80.5 0.21 7.3E-06 31.1 -0.8 21 88-108 14-37 (285)
124 1apq_A Complement protease C1R 79.6 0.84 2.9E-05 20.3 1.3 10 99-108 33-42 (53)
125 3t3p_B Integrin beta-3; integr 77.7 1.1 3.6E-05 30.1 1.7 25 88-113 447-472 (472)
126 2kl7_A Fibulin-4; secreted, ca 76.8 0.88 3E-05 22.0 0.9 30 48-77 2-37 (71)
127 3t3p_B Integrin beta-3; integr 64.4 2.8 9.7E-05 28.1 1.4 25 56-81 447-472 (472)
128 3v4v_B Integrin beta-7; cell a 63.2 1.5 5.2E-05 29.7 0.0 24 89-113 469-493 (503)
129 1ob1_C Major merozoite surface 51.8 19 0.00066 18.7 3.0 10 99-108 74-83 (99)
130 2wph_E Coagulation factor IXA 45.4 9.1 0.00031 17.6 1.1 11 31-41 20-30 (59)
131 1szb_A Mannose binding lectin- 43.6 2.3 7.7E-05 24.0 -1.4 10 99-108 148-157 (170)
132 1jlz_A Tityustoxin alpha-KTX; 42.9 3.3 0.00011 15.9 -0.5 16 88-104 8-23 (26)
133 1n1i_A Merozoite surface prote 39.8 35 0.0012 17.9 2.8 19 89-107 61-83 (105)
134 2jkh_L Factor X light chain; p 37.7 7.2 0.00025 17.5 0.1 11 98-108 21-31 (55)
135 1cmr_A Charybdotoxin, alpha ch 36.6 24 0.00083 14.0 1.8 11 92-103 19-29 (31)
136 3fl7_A Ephrin receptor; ATP-bi 32.9 16 0.00055 25.0 1.2 20 57-76 252-272 (536)
137 2bz6_L Blood coagulation facto 32.3 9.9 0.00034 16.9 0.1 10 99-108 21-30 (53)
138 1kig_L Factor XA; glycoprotein 29.7 9.1 0.00031 16.9 -0.3 11 98-108 18-28 (51)
139 2pe4_A Hyaluronidase-1; hyalur 28.5 19 0.00066 23.9 0.9 16 99-114 397-412 (424)
140 1pvz_A K+ toxin-like peptide; 28.0 6.6 0.00022 15.7 -0.8 16 87-103 15-30 (31)
141 3fby_A COMP, cartilage oligome 27.5 23 0.00078 24.5 1.2 22 88-109 28-53 (551)
142 1kli_L Factor VIIA; extrinsic 24.3 17 0.00057 17.3 0.1 11 98-108 26-36 (69)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.89 E-value=3.6e-23 Score=130.28 Aligned_cols=111 Identities=41% Similarity=1.144 Sum_probs=59.3
Q ss_pred CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC 80 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c 80 (116)
.|.|.+||+|..|+...|..+|.++|.|...+.|.|.+||+|..|+... +..+|.++|.|...+.|.|++||.|..|
T Consensus 166 ~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~---C~~~C~~~G~C~~~~~C~C~~G~~G~~C 242 (324)
T 2ygq_A 166 ICECPDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKAN---CSTTCFNGGTCFYPGKCICPPGLEGEQC 242 (324)
T ss_dssp CEECCTTEESSSSCEESSSSCCCTTCEECSSCCEECCTTCBTTTTCBCC---CSSCCCSSCCBSCSSCBCCCTTCCTTTT
T ss_pred eEECCCCCcCCCCCCCCCCCCCCCCCEEcCCCEEeCCCCccCCCcccCc---CCCCCCCCCeeCCCCeeeCCCCccCCCC
Confidence 4778888888888877777778888888777788888888888887433 3456777777776677788888888777
Q ss_pred CCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
+++.|..+|.++|+|...++|.|++||+|..|+.
T Consensus 243 ~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~ 276 (324)
T 2ygq_A 243 EISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSK 276 (324)
T ss_dssp C---------------------------------
T ss_pred CcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcC
Confidence 7666666677777776656777777777777653
No 2
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.87 E-value=5e-23 Score=129.66 Aligned_cols=112 Identities=46% Similarity=1.157 Sum_probs=42.6
Q ss_pred CccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCC
Q psy6687 1 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYC 80 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c 80 (116)
.|.|.+||+|..|+...|..+|.++|+|...+.|.|++||+|..|+.. . +..+|.++|.|...+.|.|++||.|..|
T Consensus 198 ~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~--~-C~~~C~~~g~C~~~~~C~C~~G~~G~~C 274 (324)
T 2ygq_A 198 FCICPPGFYGVNCDKANCSTTCFNGGTCFYPGKCICPPGLEGEQCEIS--K-CPQPCRNGGKCIGKSKCKCSKGYQGDLC 274 (324)
T ss_dssp CEECCTTCBTTTTCBCCCSSCCCSSCCBSCSSCBCCCTTCCTTTTC----------------------------------
T ss_pred EEeCCCCccCCCcccCcCCCCCCCCCeeCCCCeeeCCCCccCCCCCcC--c-CCCcCCCCCEECCCCEEECCCCCcCCCC
Confidence 488999999999998889888999999988889999999999999743 3 3467888999987789999999999999
Q ss_pred CCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCCC
Q psy6687 81 GTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 81 ~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~~ 115 (116)
+.+.|..+|.++|+|.+.++|.|++||+|.+|+..
T Consensus 275 ~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~ 309 (324)
T 2ygq_A 275 SKPVCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKR 309 (324)
T ss_dssp -----------------------------------
T ss_pred cCCCCCCCCCCCCEECCCCEeECCCCCcCCCCCCC
Confidence 98888888999999998899999999999999754
No 3
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.80 E-value=3.8e-20 Score=107.16 Aligned_cols=109 Identities=37% Similarity=0.922 Sum_probs=87.0
Q ss_pred CccCCCCCcCCCCCCCCCCCCCC-CCcEecCCCceeCCCCCccCCCCCCCCCCCCCC-CCCCceeCCCCceecCCCCcCC
Q psy6687 1 MCQCPKGYQGTYCGTAMCFPQCL-NNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQK-CSNGGWCDSQQMCQCPKGYQGT 78 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~~c~-~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~-c~~~g~c~~~~~c~C~~g~~g~ 78 (116)
.|.|.+||+|..|+...|...|. .+|.|++.+.|.|.+||+|..|+. +...+ |. +|+|...++|.|++||.|.
T Consensus 51 ~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~~~~C~C~~G~~G~~C~~----C~~~~~C~-~g~C~~~~~C~C~~G~~G~ 125 (169)
T 2vj2_A 51 NKTCMEGWMGPECNRAICRQGCSPKHGSCKLPGDCRCQYGWQGLYCDK----CIPHPGCV-HGICNEPWQCLCETNWGGQ 125 (169)
T ss_dssp CEEECTTEESTTSCEECCCTTCCTTTEECSSTTCCEECTTEESSSSCE----ECCCTTCS-SEECSSTTCCEECTTEETT
T ss_pred eeECCCCCcCCCCCCCCCCCCCCCCCcccCCCCeeECCCCCCCCCccc----CCCCCCCC-CCCcCCCCEEeCCCCCCCC
Confidence 36889999999998777877776 668888778999999999998863 22233 65 3588876899999999999
Q ss_pred CCC--CCCCC--CCCCCCcEecCC----CceeCCCCCcCCCCCC
Q psy6687 79 YCG--TAMCF--PQCLNNGTCTAP----GVCSCPPGFQGLHCEG 114 (116)
Q Consensus 79 ~c~--~~~c~--~~c~~~g~c~~~----~~C~C~~g~~g~~C~~ 114 (116)
.|+ +++|. .+|.++++|++. ++|.|++||+|.+|++
T Consensus 126 ~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 126 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp TTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 998 34464 689999999753 7999999999999974
No 4
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.77 E-value=7.7e-19 Score=119.27 Aligned_cols=110 Identities=35% Similarity=0.875 Sum_probs=93.0
Q ss_pred ccCCCCCcCCCCCCC----------CCCC-----CCCCCcEecCCCceeCC----CCCccCCCCCCCCCCCC---CCCCC
Q psy6687 2 CQCPKGYQGTYCGTA----------MCFP-----QCLNNGTCTAPGVCSCP----PGFQGLHCEGGPGPGCD---QKCSN 59 (116)
Q Consensus 2 C~C~~g~~g~~c~~~----------~c~~-----~c~~~g~C~~~~~C~c~----~g~~g~~c~~~~~~~~~---~~c~~ 59 (116)
|.|.+||+|..|+.. .|.. +|+++|+|.. +.|.|. ++|+|..|+.+...|.. .+|.+
T Consensus 460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~ 538 (690)
T 3fcs_B 460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSG 538 (690)
T ss_dssp EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGG
T ss_pred eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCC
Confidence 889999999999754 3653 3889999985 899999 99999999866666653 36888
Q ss_pred CceeCCCCceecCCCCcCCCCC----CCCCC----CCCCCCcEecCCCceeC-CCCCcCCCCCC
Q psy6687 60 GGWCDSQQMCQCPKGYQGTYCG----TAMCF----PQCLNNGTCTAPGVCSC-PPGFQGLHCEG 114 (116)
Q Consensus 60 ~g~c~~~~~c~C~~g~~g~~c~----~~~c~----~~c~~~g~c~~~~~C~C-~~g~~g~~C~~ 114 (116)
+|.|.. +.|.|.+||.|..|+ ...|. .+|.++|+|.. ++|.| .+||+|.+|+.
T Consensus 539 ~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~-g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 539 HGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC-GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp SEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET-TEEECCSTTCBSTTSCB
T ss_pred CCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC-CEEECCCCCccCCCcCc
Confidence 999987 899999999999998 45676 46999999986 79999 99999999985
No 5
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.74 E-value=2.3e-18 Score=96.38 Aligned_cols=96 Identities=34% Similarity=0.796 Sum_probs=81.3
Q ss_pred CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCC--CCCCC-CCCC
Q psy6687 20 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG--TAMCF-PQCL 90 (116)
Q Consensus 20 ~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~--~~~c~-~~c~ 90 (116)
.+|.++++|++ .|.|.|++||+|..|+.++++|...+|.+++.|++. +.|.|++||.|..|+ +++|. .+|.
T Consensus 13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~ 92 (135)
T 2vj3_A 13 NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCL 92 (135)
T ss_dssp CSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCST
T ss_pred CCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcC
Confidence 35888899975 468999999999999877788888889999999753 689999999999997 45675 6899
Q ss_pred CCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687 91 NNGTCTA---PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 91 ~~g~c~~---~~~C~C~~g~~g~~C~~~ 115 (116)
++++|++ .++|.|++||+|.+|+++
T Consensus 93 ~~g~C~~~~g~~~C~C~~G~~G~~C~~~ 120 (135)
T 2vj3_A 93 HNGRCLDKINEFQCECPTGFTGHLCQVD 120 (135)
T ss_dssp TTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred CCCEeECCCCCeEEECCCCCcCCccCcc
Confidence 9999974 479999999999999754
No 6
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.73 E-value=2.1e-18 Score=99.81 Aligned_cols=109 Identities=31% Similarity=0.808 Sum_probs=84.3
Q ss_pred CccCCCCCcCCCCCCCCCCC--CCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCC-CCceeCCCCceecCCCCcC
Q psy6687 1 MCQCPKGYQGTYCGTAMCFP--QCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCS-NGGWCDSQQMCQCPKGYQG 77 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~--~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~-~~g~c~~~~~c~C~~g~~g 77 (116)
.|.|.+||+|..|+. .|.. .+.++++|...+.|.|.+||+|..|+..+ +...|. .+|.|...+.|.|++||.|
T Consensus 18 ~c~C~~g~~G~~C~~-~C~~~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~---C~~~C~~~~g~C~~~~~C~C~~G~~G 93 (169)
T 2vj2_A 18 AVTCDDYYYGFGCNK-FCRPRDDFFGHYACDQNGNKTCMEGWMGPECNRAI---CRQGCSPKHGSCKLPGDCRCQYGWQG 93 (169)
T ss_dssp ---CCTTEETTTTCE-ECCCEEETTEEEEECSSCCEEECTTEESTTSCEEC---CCTTCCTTTEECSSTTCCEECTTEES
T ss_pred eeeCCCcCcCCCccc-ccCCCCCcCCCCEeCCCCeeECCCCCcCCCCCCCC---CCCCCCCCCcccCCCCeeECCCCCCC
Confidence 478999999999975 4554 47778899777899999999999998533 344565 6788887789999999999
Q ss_pred CCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 78 TYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 78 ~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
..|+.-.....|.+ ++|+..++|.|++||+|..|++
T Consensus 94 ~~C~~C~~~~~C~~-g~C~~~~~C~C~~G~~G~~C~~ 129 (169)
T 2vj2_A 94 LYCDKCIPHPGCVH-GICNEPWQCLCETNWGGQLCDK 129 (169)
T ss_dssp SSSCEECCCTTCSS-EECSSTTCCEECTTEETTTTCE
T ss_pred CCcccCCCCCCCCC-CCcCCCCEEeCCCCCCCCcccC
Confidence 99974222233765 4898779999999999999974
No 7
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.70 E-value=8e-17 Score=90.88 Aligned_cols=95 Identities=37% Similarity=0.945 Sum_probs=77.5
Q ss_pred CCCCCcEecC-----CCceeCCCCCccCCCCC------------CCCCCCCCCCCCCceeC-------C---CCceecCC
Q psy6687 21 QCLNNGTCTA-----PGVCSCPPGFQGLHCEG------------GPGPGCDQKCSNGGWCD-------S---QQMCQCPK 73 (116)
Q Consensus 21 ~c~~~g~C~~-----~~~C~c~~g~~g~~c~~------------~~~~~~~~~c~~~g~c~-------~---~~~c~C~~ 73 (116)
+|.++++|++ .|.|.|++||+|..|+. .+++|...+|.+++.|+ + .+.|.|++
T Consensus 7 pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~ 86 (143)
T 4d90_A 7 PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPR 86 (143)
T ss_dssp CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCT
T ss_pred cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcC
Confidence 5788899975 37899999999999975 34556667898999997 2 36899999
Q ss_pred CCcCCCCC--CCCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687 74 GYQGTYCG--TAMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 74 g~~g~~c~--~~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~ 115 (116)
||.|..|+ +++|. .+|.++++|++ .++|.|++||+|.+|+..
T Consensus 87 G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 87 GFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp TEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred CCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCceec
Confidence 99999996 45676 68999999974 368999999999999753
No 8
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.69 E-value=1.7e-17 Score=112.64 Aligned_cols=111 Identities=32% Similarity=0.811 Sum_probs=90.6
Q ss_pred CccCCCCCcCCCCCCC-----------CCCC-----CCCCCcEecCCCceeCC------CCCccCCCCCCCCCCCC---C
Q psy6687 1 MCQCPKGYQGTYCGTA-----------MCFP-----QCLNNGTCTAPGVCSCP------PGFQGLHCEGGPGPGCD---Q 55 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~-----------~c~~-----~c~~~g~C~~~~~C~c~------~g~~g~~c~~~~~~~~~---~ 55 (116)
.|.|.+||+|..|+.. .|.. .|.++|.|.. +.|.|. ++|+|..|+.+...|.. .
T Consensus 447 ~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-G~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~ 525 (687)
T 3k6s_B 447 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 525 (687)
T ss_dssp SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-TEEEECCCCSTTCCEESTTSCEESSCSCEETTE
T ss_pred EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-CEEEcCCCCCCCCCccccccccccccccCCCCc
Confidence 4889999999999831 3643 3889999985 799999 99999999855555542 2
Q ss_pred CCCC--CceeCCCCceecCCCCcCCCCC----CCCCCC----CCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 56 KCSN--GGWCDSQQMCQCPKGYQGTYCG----TAMCFP----QCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 56 ~c~~--~g~c~~~~~c~C~~g~~g~~c~----~~~c~~----~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
+|.+ +|.|.. +.|.|.+||.|..|+ ...|.. +|.++|+|.. ++|.|.+||+|++|+.
T Consensus 526 ~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 526 VCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-NVCECHSGYQLPLCQE 592 (687)
T ss_dssp ETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-SCBCCSTTCCTTTTCC
T ss_pred CcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-CEEECCCCCcCCCCCC
Confidence 5887 899986 799999999999998 345652 6999999986 8999999999999985
No 9
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.68 E-value=1.4e-16 Score=108.27 Aligned_cols=107 Identities=26% Similarity=0.665 Sum_probs=89.4
Q ss_pred CccCC----CCCcCCCCCC--CCCCC----CCCCCcEecCCCceeCCCCCccCCCC--CCCCCCCC---CCCCCCceeCC
Q psy6687 1 MCQCP----KGYQGTYCGT--AMCFP----QCLNNGTCTAPGVCSCPPGFQGLHCE--GGPGPGCD---QKCSNGGWCDS 65 (116)
Q Consensus 1 ~C~C~----~g~~g~~c~~--~~c~~----~c~~~g~C~~~~~C~c~~g~~g~~c~--~~~~~~~~---~~c~~~g~c~~ 65 (116)
.|.|. +||+|..|+. ..|.. +|.++|.|.. +.|.|.+||+|..|+ .....|.. .+|.++|.|..
T Consensus 505 ~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~-g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~ 583 (690)
T 3fcs_B 505 QCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC-GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC 583 (690)
T ss_dssp SEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET-TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET
T ss_pred eeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC-CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC
Confidence 47898 9999999974 45763 5888999987 899999999999998 44556654 46999999987
Q ss_pred CCceec-CCCCcCCCCCC-CCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 66 QQMCQC-PKGYQGTYCGT-AMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 66 ~~~c~C-~~g~~g~~c~~-~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
+.|.| .+||.|..|+. ..|..+|.+++.|+. |..+|+|++|+.
T Consensus 584 -g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~-----C~~g~tG~~C~~ 628 (690)
T 3fcs_B 584 -GSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE-----CKKFDRGALHDE 628 (690)
T ss_dssp -TEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT-----TTTTCCSSSSSS
T ss_pred -CEEECCCCCccCCCcCcCCCCCCCCCCCCCccc-----CCCCCccCCCCc
Confidence 79999 99999999997 667788999998875 899999997643
No 10
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.65 E-value=6.4e-16 Score=100.44 Aligned_cols=112 Identities=35% Similarity=0.849 Sum_probs=86.3
Q ss_pred ccCCCCCcCCCCCCCCCCCCCCCCcEecC-CCceeCCCCCccCCCCCCCC----------CCC-CCCCCCCceeCC-CCc
Q psy6687 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTA-PGVCSCPPGFQGLHCEGGPG----------PGC-DQKCSNGGWCDS-QQM 68 (116)
Q Consensus 2 C~C~~g~~g~~c~~~~c~~~c~~~g~C~~-~~~C~c~~g~~g~~c~~~~~----------~~~-~~~c~~~g~c~~-~~~ 68 (116)
|.|.+||+|+.|+. .|. +|.++|+|.. ++.|.|++||.|..|+.... .|. ..+|.+++.|.. .+.
T Consensus 187 c~C~~g~~G~~C~~-~C~-~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~ 264 (423)
T 2gy5_A 187 RRCEAQKWGPECNH-LCT-ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYG 264 (423)
T ss_dssp CSSCTTEESTTSCE-ECC-CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTE
T ss_pred CcCCCCCCCCCCCC-CCC-CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCe
Confidence 68999999999986 353 6889999986 68999999999999984211 111 234666667753 379
Q ss_pred eecCCCCcCCCCCC--------CCCCC--CCCCCcEecCCCceeCCCCCcCCCCCCC
Q psy6687 69 CQCPKGYQGTYCGT--------AMCFP--QCLNNGTCTAPGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 69 c~C~~g~~g~~c~~--------~~c~~--~c~~~g~c~~~~~C~C~~g~~g~~C~~~ 115 (116)
|.|+++|.|..|+. ..|.. +|.++++|.+...|.|++||+|.+|+..
T Consensus 265 C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 265 CSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCERE 321 (423)
T ss_dssp EECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTEEECCTTCBSTTSCBC
T ss_pred EEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCceECCCCCcCCCCccC
Confidence 99999999998875 12321 6888999997778999999999999853
No 11
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.53 E-value=7.6e-17 Score=94.63 Aligned_cols=114 Identities=24% Similarity=0.480 Sum_probs=88.3
Q ss_pred CccCCCCCcCC---CCCC-CCCC-----CCCCCCcEecC--------CCceeCCCCCccCCCCCCCCCCCCCCCCCCcee
Q psy6687 1 MCQCPKGYQGT---YCGT-AMCF-----PQCLNNGTCTA--------PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWC 63 (116)
Q Consensus 1 ~C~C~~g~~g~---~c~~-~~c~-----~~c~~~g~C~~--------~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c 63 (116)
+|.|++||+|. .|+. ++|. .+|.++++|++ .|.|.|++||.|..+.-.+++|...+|.+++.|
T Consensus 26 ~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C 105 (186)
T 1z1y_A 26 XCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGEC 105 (186)
T ss_dssp EEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEE
T ss_pred EeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEE
Confidence 37899999987 6753 4565 34888889964 357999999999865433567777789989999
Q ss_pred C----CC---CceecCCCCcC-----CCCCC---CCCCCCC-CCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687 64 D----SQ---QMCQCPKGYQG-----TYCGT---AMCFPQC-LNNGTCTA---PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 64 ~----~~---~~c~C~~g~~g-----~~c~~---~~c~~~c-~~~g~c~~---~~~C~C~~g~~g~~C~~ 114 (116)
+ +. +.|.|++||.| ..|+. ++|..+| .++++|++ .++|.|++||+|..+++
T Consensus 106 ~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 106 IVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp EEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred eeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccc
Confidence 7 43 68999999998 66763 4677789 88899984 37899999999988764
No 12
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.52 E-value=1.7e-14 Score=81.26 Aligned_cols=82 Identities=38% Similarity=1.004 Sum_probs=68.4
Q ss_pred ccCCCCCcCCCCCC--------------CCCCC-CCCCCcEec-------C---CCceeCCCCCccCCCCCCCCCCCCCC
Q psy6687 2 CQCPKGYQGTYCGT--------------AMCFP-QCLNNGTCT-------A---PGVCSCPPGFQGLHCEGGPGPGCDQK 56 (116)
Q Consensus 2 C~C~~g~~g~~c~~--------------~~c~~-~c~~~g~C~-------~---~~~C~c~~g~~g~~c~~~~~~~~~~~ 56 (116)
|.|++||+|..|+. ..|.. +|.++++|+ + .+.|.|++||.|..|+.++++|...+
T Consensus 25 C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~ 104 (143)
T 4d90_A 25 CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEP 104 (143)
T ss_dssp EECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCC
T ss_pred eECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCC
Confidence 88999999999865 23533 488889997 2 57899999999999987788888889
Q ss_pred CCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687 57 CSNGGWCDSQ---QMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 57 c~~~g~c~~~---~~c~C~~g~~g~~c~~~ 83 (116)
|.+++.|++. +.|.|++||.|..++..
T Consensus 105 C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 105 CKNGGICTDLVANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp SCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred CCCCCEeECCCCCeEeECCCCCccCCceec
Confidence 9999999753 58999999999999853
No 13
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.49 E-value=9.3e-15 Score=82.42 Aligned_cols=96 Identities=26% Similarity=0.642 Sum_probs=73.9
Q ss_pred CCCCCCCCCcEecCCCceeCCCCCcc---------CCCCCCCCCCCCC---CCCCCceeCCC---CceecCCCCcCCC--
Q psy6687 17 MCFPQCLNNGTCTAPGVCSCPPGFQG---------LHCEGGPGPGCDQ---KCSNGGWCDSQ---QMCQCPKGYQGTY-- 79 (116)
Q Consensus 17 ~c~~~c~~~g~C~~~~~C~c~~g~~g---------~~c~~~~~~~~~~---~c~~~g~c~~~---~~c~C~~g~~g~~-- 79 (116)
.|..+|.++++|++.+.|.|++||+| ..|+ ++++|... +|.+++.|++. +.|.|++||.+..
T Consensus 4 ~C~~~C~~~~~C~~~~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 4 GCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp CCCTTCCTTEEESSSSCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred CCcCcCCCCCEEcCCCEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 35667889999998899999999998 4564 56666654 78888899753 6899999999874
Q ss_pred ----------CC-CCCCC---CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687 80 ----------CG-TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLHCE 113 (116)
Q Consensus 80 ----------c~-~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~C~ 113 (116)
|+ +++|. .+|.++++|++ +|+|.|++||+|....
T Consensus 83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 43 34454 57888899985 3789999999987653
No 14
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.49 E-value=1.6e-14 Score=80.77 Aligned_cols=82 Identities=35% Similarity=0.938 Sum_probs=68.8
Q ss_pred CccCCCCCcCCCCCC--CCCCC-CCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCC---Cceec
Q psy6687 1 MCQCPKGYQGTYCGT--AMCFP-QCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQ---QMCQC 71 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~--~~c~~-~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~---~~c~C 71 (116)
.|.|++||+|..|+. +.|.. +|.++++|++ .|.|.|++||.|..|+.++++|...+|.+++.|++. +.|.|
T Consensus 29 ~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C 108 (135)
T 2vj3_A 29 ECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCEC 108 (135)
T ss_dssp EEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTTTTCCSTTTCEEEECSSCEEEEC
T ss_pred EEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcccCCCcCCCCEeECCCCCeEEEC
Confidence 378999999999973 45654 5888899975 478999999999999877778888899999999753 68999
Q ss_pred CCCCcCCCCCC
Q psy6687 72 PKGYQGTYCGT 82 (116)
Q Consensus 72 ~~g~~g~~c~~ 82 (116)
++||.|..|++
T Consensus 109 ~~G~~G~~C~~ 119 (135)
T 2vj3_A 109 PTGFTGHLCQV 119 (135)
T ss_dssp CTTEESSSSCE
T ss_pred CCCCcCCccCc
Confidence 99999999973
No 15
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.46 E-value=3.7e-14 Score=74.09 Aligned_cols=78 Identities=28% Similarity=0.595 Sum_probs=49.9
Q ss_pred CceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCC---CCCCC-CCCCCCcEec-----CCCcee
Q psy6687 32 GVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG---TAMCF-PQCLNNGTCT-----APGVCS 102 (116)
Q Consensus 32 ~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~---~~~c~-~~c~~~g~c~-----~~~~C~ 102 (116)
|.|+|.+||+|..++ ++++...+|.+.. ..+.|.|++||. .|+ ++.|. .+|.++|+|+ ..+.|.
T Consensus 2 y~C~C~~g~~g~~c~--~~~c~~~pC~n~~---~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~ 74 (91)
T 1tpg_A 2 YQVICRDEKTQMIYQ--QHQSWLRPVLRSN---RVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQ 74 (91)
T ss_dssp CCCCCBCSSSCCBCC--SSCEEEEECSSSS---CEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEE
T ss_pred eeeECCCCCcCCeEC--CCcccCCccccCC---CCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeE
Confidence 567777777777764 3444444444321 125777888776 665 34455 5677777776 246788
Q ss_pred CCCCCcCCCCCCCC
Q psy6687 103 CPPGFQGLHCEGGT 116 (116)
Q Consensus 103 C~~g~~g~~C~~~~ 116 (116)
|++||+|.+|++++
T Consensus 75 C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 75 CPEGFAGKSCEIDT 88 (91)
T ss_dssp CCTTCBSSSCCBCS
T ss_pred CCCCCcCCcCCcCC
Confidence 88888888887553
No 16
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.44 E-value=1.3e-13 Score=93.94 Aligned_cols=94 Identities=34% Similarity=0.809 Sum_probs=76.6
Q ss_pred CccCC------CCCcCCCCC--CCCCCC----CCCC--CcEecCCCceeCCCCCccCCCCCC--CCCCCCC---CCCCCc
Q psy6687 1 MCQCP------KGYQGTYCG--TAMCFP----QCLN--NGTCTAPGVCSCPPGFQGLHCEGG--PGPGCDQ---KCSNGG 61 (116)
Q Consensus 1 ~C~C~------~g~~g~~c~--~~~c~~----~c~~--~g~C~~~~~C~c~~g~~g~~c~~~--~~~~~~~---~c~~~g 61 (116)
.|.|. +||+|..|+ ...|.. .|.+ +|.|.. +.|.|.+||+|..|+.. ...|... +|.++|
T Consensus 494 ~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G 572 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRG 572 (687)
T ss_dssp EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSC
T ss_pred EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCC
Confidence 37888 999999998 456763 3888 899986 79999999999999832 3445433 688899
Q ss_pred eeCCCCceecCCCCcCCCCCC-CCCCCCCCCCcEec
Q psy6687 62 WCDSQQMCQCPKGYQGTYCGT-AMCFPQCLNNGTCT 96 (116)
Q Consensus 62 ~c~~~~~c~C~~g~~g~~c~~-~~c~~~c~~~g~c~ 96 (116)
.|.. +.|.|.+||.|..|+. ..|..+|.+++.|+
T Consensus 573 ~C~~-g~C~C~~Gy~G~~Ce~c~~C~~~C~~~g~Cv 607 (687)
T 3k6s_B 573 RCRC-NVCECHSGYQLPLCQECPGCPSPCGKYISCA 607 (687)
T ss_dssp CBCS-SCBCCSTTCCTTTTCCCTTSCCCCTTTHHHH
T ss_pred cCCC-CEEECCCCCcCCCCCCCCCCCcccCCCCCCC
Confidence 9987 7999999999999996 45777898888886
No 17
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.41 E-value=9.7e-14 Score=82.89 Aligned_cols=92 Identities=34% Similarity=0.779 Sum_probs=74.2
Q ss_pred CCCCCcEecCCCceeCCCCCccCCCCCCCC---------CCC----CCCCCCCceeCCCCceecCCC------CcCCCCC
Q psy6687 21 QCLNNGTCTAPGVCSCPPGFQGLHCEGGPG---------PGC----DQKCSNGGWCDSQQMCQCPKG------YQGTYCG 81 (116)
Q Consensus 21 ~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~---------~~~----~~~c~~~g~c~~~~~c~C~~g------~~g~~c~ 81 (116)
.|+++|.|.. +.|.|.+||+|..|+.... .|. ..+|.++|.|.. +.|.|.++ |+|..|+
T Consensus 97 ~Csg~G~C~~-g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~Ce 174 (217)
T 2p28_B 97 LCHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCE 174 (217)
T ss_dssp TTTTSEEEET-TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTTSC
T ss_pred ccCCCceEEC-CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCCcc
Confidence 4888999986 8999999999999984322 122 245888899986 79999999 5899998
Q ss_pred --CCCCCC----CCCCC--cEecCCCceeCCCCCcCCCCCCC
Q psy6687 82 --TAMCFP----QCLNN--GTCTAPGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 82 --~~~c~~----~c~~~--g~c~~~~~C~C~~g~~g~~C~~~ 115 (116)
...|.. +|.++ |+|.. ++|.|.+||+|..|+..
T Consensus 175 ~~~~~C~~~~g~~C~~~~~G~C~~-g~C~C~~G~~G~~C~~~ 215 (217)
T 2p28_B 175 CDTINCERYNGQVCGGPGRGLCFC-GKCRCHPGFEGSACQHH 215 (217)
T ss_dssp EESSCSCEETTEETTCTTTEEEET-TEEEECTTEESTTSCEE
T ss_pred cCCccCCCCCCCCCCCCCCcEEeC-CeeECCCCCccCCcCCC
Confidence 456762 58887 99986 79999999999999853
No 18
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.33 E-value=8.7e-13 Score=68.87 Aligned_cols=78 Identities=23% Similarity=0.551 Sum_probs=61.2
Q ss_pred CccCCCCCcCCCCCCCCCCC-CCCCCcEecCCCceeCCCCCccCCCC-CCCCCCCCCCCCCCceeCC-----CCceecCC
Q psy6687 1 MCQCPKGYQGTYCGTAMCFP-QCLNNGTCTAPGVCSCPPGFQGLHCE-GGPGPGCDQKCSNGGWCDS-----QQMCQCPK 73 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~-~c~~~g~C~~~~~C~c~~g~~g~~c~-~~~~~~~~~~c~~~g~c~~-----~~~c~C~~ 73 (116)
.|.|.+||+|..|+.+.|.. +|.+.. ..+.|.|++||+ .|+ .++++|...+|.++|.|+. .+.|.|++
T Consensus 3 ~C~C~~g~~g~~c~~~~c~~~pC~n~~---~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~ 77 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQHQSWLRPVLRSN---RVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPE 77 (91)
T ss_dssp CCCCBCSSSCCBCCSSCEEEEECSSSS---CEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCT
T ss_pred eeECCCCCcCCeECCCcccCCccccCC---CCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCC
Confidence 48999999999998766532 455432 247899999997 787 4667788889999999963 36899999
Q ss_pred CCcCCCCCCC
Q psy6687 74 GYQGTYCGTA 83 (116)
Q Consensus 74 g~~g~~c~~~ 83 (116)
||.|..|+++
T Consensus 78 G~~G~~Ce~~ 87 (91)
T 1tpg_A 78 GFAGKSCEID 87 (91)
T ss_dssp TCBSSSCCBC
T ss_pred CCcCCcCCcC
Confidence 9999999853
No 19
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.25 E-value=6.6e-13 Score=87.36 Aligned_cols=79 Identities=32% Similarity=0.799 Sum_probs=37.9
Q ss_pred ceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCC
Q psy6687 33 VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHC 112 (116)
Q Consensus 33 ~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C 112 (116)
...|..+|.|..|+.. .| ..+|.+ |.|...+.|.|.++|.|..|++..|..+|.++|+|+..+.|.|++||+|.+|
T Consensus 378 p~~C~~~~~g~~c~~~--~C-~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C 453 (463)
T 2wg3_C 378 PEECRATVQPAQTLTS--EC-SRLCRN-GYCTPTGKCCCSPGWEGDFCRTAKCEPACRHGGVCVRPNKCLCKKGYLGPQC 453 (463)
T ss_dssp CGGGCCCCCCCCCCCC--HH-HHHCCS-EEECTTSCEEECTTEESTTSCEECC---------------------------
T ss_pred cccCCCCCcCCCCccc--cc-cCCCCC-CccCCCCeECCCCCcCCCcCCcCcCCCCCCCCCEECCCCEEECCCCcccCCC
Confidence 3567788888888643 23 335776 8998767999999999999998888889999999997789999999999999
Q ss_pred CCC
Q psy6687 113 EGG 115 (116)
Q Consensus 113 ~~~ 115 (116)
+..
T Consensus 454 ~~~ 456 (463)
T 2wg3_C 454 EQV 456 (463)
T ss_dssp ---
T ss_pred CCC
Confidence 853
No 20
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.21 E-value=2e-12 Score=85.09 Aligned_cols=78 Identities=35% Similarity=0.771 Sum_probs=40.3
Q ss_pred ccCCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCC
Q psy6687 2 CQCPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCG 81 (116)
Q Consensus 2 C~C~~g~~g~~c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~ 81 (116)
..|..+|.|..|+...|..+|.+ |.|...+.|.|.++|+|..|+.. .|. .+|.++|.|...+.|.|.+||.|..|+
T Consensus 379 ~~C~~~~~g~~c~~~~C~~~C~n-G~C~~~~~C~C~~G~~G~~C~~~--~C~-~~C~~~g~C~~~~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 379 EECRATVQPAQTLTSECSRLCRN-GYCTPTGKCCCSPGWEGDFCRTA--KCE-PACRHGGVCVRPNKCLCKKGYLGPQCE 454 (463)
T ss_dssp GGGCCCCCCCCCCCCHHHHHCCS-EEECTTSCEEECTTEESTTSCEE--CC-----------------------------
T ss_pred ccCCCCCcCCCCccccccCCCCC-CccCCCCeECCCCCcCCCcCCcC--cCC-CCCCCCCEECCCCEEECCCCcccCCCC
Confidence 46889999999988888777886 89987789999999999999733 343 489999999877899999999999998
Q ss_pred CC
Q psy6687 82 TA 83 (116)
Q Consensus 82 ~~ 83 (116)
..
T Consensus 455 ~~ 456 (463)
T 2wg3_C 455 QV 456 (463)
T ss_dssp --
T ss_pred CC
Confidence 53
No 21
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.20 E-value=2.1e-12 Score=77.16 Aligned_cols=80 Identities=30% Similarity=0.759 Sum_probs=63.5
Q ss_pred CccCCCCCcCCCCCCC-----------CCC-----CCCCCCcEecCCCceeCCCC------CccCCCCCCCCCCCCC---
Q psy6687 1 MCQCPKGYQGTYCGTA-----------MCF-----PQCLNNGTCTAPGVCSCPPG------FQGLHCEGGPGPGCDQ--- 55 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~-----------~c~-----~~c~~~g~C~~~~~C~c~~g------~~g~~c~~~~~~~~~~--- 55 (116)
+|.|.+||+|..|+.+ .|. .+|+++|+|+. +.|.|.++ |+|..|+.+...|...
T Consensus 108 ~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~ 186 (217)
T 2p28_B 108 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQ 186 (217)
T ss_dssp EEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-TEEEECCCCSTTCCEESTTSCEESSCSCEETTE
T ss_pred EEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-CceECCCCCCCcccEECCCcccCCccCCCCCCC
Confidence 3789999999999743 243 24888999985 79999999 5899998544455433
Q ss_pred CCCCC--ceeCCCCceecCCCCcCCCCCC
Q psy6687 56 KCSNG--GWCDSQQMCQCPKGYQGTYCGT 82 (116)
Q Consensus 56 ~c~~~--g~c~~~~~c~C~~g~~g~~c~~ 82 (116)
+|..+ |.|.. +.|.|.+||.|..|+.
T Consensus 187 ~C~~~~~G~C~~-g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 187 VCGGPGRGLCFC-GKCRCHPGFEGSACQH 214 (217)
T ss_dssp ETTCTTTEEEET-TEEEECTTEESTTSCE
T ss_pred CCCCCCCcEEeC-CeeECCCCCccCCcCC
Confidence 58877 99986 7999999999999974
No 22
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.18 E-value=3.4e-11 Score=78.44 Aligned_cols=83 Identities=36% Similarity=0.825 Sum_probs=61.3
Q ss_pred CccCCCCCcCCCCCCC--------CCC------CCCCCCcEecC-CCceeCCCCCccCCCCCCC------CCCC-CCCCC
Q psy6687 1 MCQCPKGYQGTYCGTA--------MCF------PQCLNNGTCTA-PGVCSCPPGFQGLHCEGGP------GPGC-DQKCS 58 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~--------~c~------~~c~~~g~C~~-~~~C~c~~g~~g~~c~~~~------~~~~-~~~c~ 58 (116)
.|.|++||+|..|+.. .|. ..|.+++.|.. .+.|.|.++|.|..|+..- ..|. .-+|.
T Consensus 217 ~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ 296 (423)
T 2gy5_A 217 ECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCN 296 (423)
T ss_dssp CEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCT
T ss_pred cEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcccccccCC
Confidence 4899999999999842 232 23666777763 6899999999999987411 0111 11578
Q ss_pred CCceeCCCCceecCCCCcCCCCCCC
Q psy6687 59 NGGWCDSQQMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 59 ~~g~c~~~~~c~C~~g~~g~~c~~~ 83 (116)
+++.|.....|.|+++|.|..|+..
T Consensus 297 ngg~C~~~~~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 297 NGEMCDRFQGCLCSPGWQGLQCERE 321 (423)
T ss_dssp TCCEEETTTEEECCTTCBSTTSCBC
T ss_pred CCCEecCCCceECCCCCcCCCCccC
Confidence 8899987667999999999999964
No 23
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.17 E-value=9.4e-12 Score=84.16 Aligned_cols=92 Identities=29% Similarity=0.713 Sum_probs=73.1
Q ss_pred CCCCCcEecC----CCce-eCCCCCcc--CCCCCCCCCCCCCC--CCCCc---eeCCC---Ccee-cCCCCcCCCCC---
Q psy6687 21 QCLNNGTCTA----PGVC-SCPPGFQG--LHCEGGPGPGCDQK--CSNGG---WCDSQ---QMCQ-CPKGYQGTYCG--- 81 (116)
Q Consensus 21 ~c~~~g~C~~----~~~C-~c~~g~~g--~~c~~~~~~~~~~~--c~~~g---~c~~~---~~c~-C~~g~~g~~c~--- 81 (116)
+|.++++|++ +|+| .|++||+| ..|+ .+.+|...+ |.+++ .|.+. ++|. |++||.|..++
T Consensus 10 PC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g 88 (634)
T 1yo8_A 10 PCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVG 88 (634)
T ss_dssp CSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESS
T ss_pred CCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccc
Confidence 5888888874 3789 99999998 7897 778887776 98887 88753 6898 99999988754
Q ss_pred -------------CCCCC---CCCCCCcEecC-------CCceeCCCCCcC--CCCC
Q psy6687 82 -------------TAMCF---PQCLNNGTCTA-------PGVCSCPPGFQG--LHCE 113 (116)
Q Consensus 82 -------------~~~c~---~~c~~~g~c~~-------~~~C~C~~g~~g--~~C~ 113 (116)
+.+|. .+|.++++|++ .++|.|++||+| ..|+
T Consensus 89 ~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 89 LEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp SHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred ccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence 45675 37988899973 368999999988 6775
No 24
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.14 E-value=5.2e-13 Score=78.29 Aligned_cols=87 Identities=28% Similarity=0.577 Sum_probs=68.0
Q ss_pred CCCCCcEecC---CCceeCCCCCccC---CCCCCCCCCC----CCCCCCCceeCCC--------CceecCCCCcCCCC--
Q psy6687 21 QCLNNGTCTA---PGVCSCPPGFQGL---HCEGGPGPGC----DQKCSNGGWCDSQ--------QMCQCPKGYQGTYC-- 80 (116)
Q Consensus 21 ~c~~~g~C~~---~~~C~c~~g~~g~---~c~~~~~~~~----~~~c~~~g~c~~~--------~~c~C~~g~~g~~c-- 80 (116)
+|.+ ++|++ .|.|.|++||+|. .|+ ++++|. ..+|.+++.|++. +.|.|++||.|..+
T Consensus 12 pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C 89 (186)
T 1z1y_A 12 ICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTC 89 (186)
T ss_dssp CCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEE
T ss_pred CCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCC
Confidence 5764 58875 5789999999987 776 567776 5678888888642 47999999998744
Q ss_pred CCCCCC-CCCCCCcEec----C---CCceeCCCCCcC
Q psy6687 81 GTAMCF-PQCLNNGTCT----A---PGVCSCPPGFQG 109 (116)
Q Consensus 81 ~~~~c~-~~c~~~g~c~----~---~~~C~C~~g~~g 109 (116)
.+++|. .+|.++++|+ + .++|.|++||+|
T Consensus 90 ~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 90 VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 456666 5798889997 4 379999999988
No 25
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.08 E-value=1.3e-13 Score=84.06 Aligned_cols=98 Identities=16% Similarity=0.145 Sum_probs=70.7
Q ss_pred CcCCCCCCCC--CCCCCCCCcEecC---CCceeCCCCCccCCCCCCCCC------CCCCCCCCCceeCCCCceecCCCCc
Q psy6687 8 YQGTYCGTAM--CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGP------GCDQKCSNGGWCDSQQMCQCPKGYQ 76 (116)
Q Consensus 8 ~~g~~c~~~~--c~~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~------~~~~~c~~~g~c~~~~~c~C~~g~~ 76 (116)
|.|..++... +..+|.++|+|++ +|.|.|++||+|..|+..+++ +...||.+++++ |.
T Consensus 24 ~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc-----------~~ 92 (267)
T 4fbr_A 24 LIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVW-----------VL 92 (267)
T ss_dssp ECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEE-----------EC
T ss_pred eeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCee-----------ec
Confidence 4455554321 2335888999986 689999999999999977665 555566666554 34
Q ss_pred CCCCCCC-CCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCCC
Q psy6687 77 GTYCGTA-MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGT 116 (116)
Q Consensus 77 g~~c~~~-~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~~ 116 (116)
|..|++. +|. .+|.++++|++ +|+|.|++||+|.+|+.++
T Consensus 93 G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~ 137 (267)
T 4fbr_A 93 GARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDT 137 (267)
T ss_dssp CCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCE
T ss_pred cCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCc
Confidence 5666643 354 68999999974 4899999999999998653
No 26
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.05 E-value=7.5e-14 Score=85.18 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=65.5
Q ss_pred CccCCCCCcCCCCCCC--C------CCC------------------------CCCCCcEecC---CCceeCCCCCccCCC
Q psy6687 1 MCQCPKGYQGTYCGTA--M------CFP------------------------QCLNNGTCTA---PGVCSCPPGFQGLHC 45 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~--~------c~~------------------------~c~~~g~C~~---~~~C~c~~g~~g~~c 45 (116)
.|.|+.||+|..|+.. + |.. +|.++++|++ +|+|.|+++|+|..|
T Consensus 54 ~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~C 133 (267)
T 4fbr_A 54 NGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVT 133 (267)
T ss_dssp TTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEC
T ss_pred EEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCC
Confidence 4789999999888642 1 111 2555555543 577788888888888
Q ss_pred CCCCCCCC------CCCCCCCceeCCCCceecCCCCcCCCCCCCC--CCCCCCCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687 46 EGGPGPGC------DQKCSNGGWCDSQQMCQCPKGYQGTYCGTAM--CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 46 ~~~~~~~~------~~~c~~~g~c~~~~~c~C~~g~~g~~c~~~~--c~~~c~~~g~c~~---~~~C~C~~g~~g~~C~~ 114 (116)
+..++.+. ..+|.+.+.+ +.|.++++.+ +..+|.++++|++ +|+|.|++||+|.+|+.
T Consensus 134 e~~~d~C~n~~~c~s~pC~ngg~c-----------~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~ 202 (267)
T 4fbr_A 134 DGDTYSVENQWGGSAAPWHSGGVW-----------VLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSP 202 (267)
T ss_dssp CCCEEEEEEECSSTTSCCEEEEEE-----------ECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEET
T ss_pred CCCcccccccCCcCCccccCCcce-----------ecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCcccccccc
Confidence 76554422 2233322222 3455565432 2256888888873 48999999999998876
Q ss_pred C
Q psy6687 115 G 115 (116)
Q Consensus 115 ~ 115 (116)
+
T Consensus 203 ~ 203 (267)
T 4fbr_A 203 D 203 (267)
T ss_dssp T
T ss_pred c
Confidence 5
No 27
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.92 E-value=1e-10 Score=65.82 Aligned_cols=81 Identities=20% Similarity=0.560 Sum_probs=59.6
Q ss_pred CccCCCCCcC---------CCCC-CCCCCC----CCCCCcEecC---CCceeCCCCCccCCCC-----------CCCCCC
Q psy6687 1 MCQCPKGYQG---------TYCG-TAMCFP----QCLNNGTCTA---PGVCSCPPGFQGLHCE-----------GGPGPG 52 (116)
Q Consensus 1 ~C~C~~g~~g---------~~c~-~~~c~~----~c~~~g~C~~---~~~C~c~~g~~g~~c~-----------~~~~~~ 52 (116)
.|.|++||+| ..|+ .++|.. +|.++++|++ .|.|.|++||.|..++ .++++|
T Consensus 20 ~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC 99 (143)
T 2bou_A 20 ACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDEC 99 (143)
T ss_dssp CEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHH
T ss_pred EEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCc
Confidence 4889999998 4564 345643 5888899975 5789999999987432 145555
Q ss_pred CC--CCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687 53 CD--QKCSNGGWCDSQ---QMCQCPKGYQGTYCG 81 (116)
Q Consensus 53 ~~--~~c~~~g~c~~~---~~c~C~~g~~g~~c~ 81 (116)
.. .+|.+++.|++. +.|.|++||.+....
T Consensus 100 ~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 100 SSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp HHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred cCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 42 578888888753 689999999987765
No 28
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.70 E-value=6.1e-09 Score=48.94 Aligned_cols=29 Identities=34% Similarity=0.891 Sum_probs=17.7
Q ss_pred CCCCCCcEec--------CCCceeCCCCCcCCCCCCC
Q psy6687 87 PQCLNNGTCT--------APGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 87 ~~c~~~g~c~--------~~~~C~C~~g~~g~~C~~~ 115 (116)
.+|.++|+|. +.|.|.|++||+|.+||.+
T Consensus 14 ~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 14 TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp TTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 4566666662 1356777777777777643
No 29
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.68 E-value=3.4e-08 Score=67.12 Aligned_cols=81 Identities=32% Similarity=0.794 Sum_probs=61.3
Q ss_pred Cc-cCCCCCcC--CCCCC-CCCCC-C--CCCCc---EecC---CCcee-CCCCCccCCCC--------------CCCCCC
Q psy6687 1 MC-QCPKGYQG--TYCGT-AMCFP-Q--CLNNG---TCTA---PGVCS-CPPGFQGLHCE--------------GGPGPG 52 (116)
Q Consensus 1 ~C-~C~~g~~g--~~c~~-~~c~~-~--c~~~g---~C~~---~~~C~-c~~g~~g~~c~--------------~~~~~~ 52 (116)
.| .|++||+| ..|+. .+|.. + |.+++ +|++ .|+|. |++||.|..++ ..+.+|
T Consensus 26 ~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC 105 (634)
T 1yo8_A 26 SCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPC 105 (634)
T ss_dssp EECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTT
T ss_pred ECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccccccc
Confidence 37 89999998 67863 45753 4 88887 8975 57898 99999988754 245666
Q ss_pred CC--CCCCCCceeCC-------CCceecCCCCcC--CCCC
Q psy6687 53 CD--QKCSNGGWCDS-------QQMCQCPKGYQG--TYCG 81 (116)
Q Consensus 53 ~~--~~c~~~g~c~~-------~~~c~C~~g~~g--~~c~ 81 (116)
.. .+|.+++.|++ .++|.|++||.| ..|+
T Consensus 106 ~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 106 KDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp TTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred cCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence 64 47988888863 258999999987 6785
No 30
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.67 E-value=4.1e-10 Score=61.37 Aligned_cols=76 Identities=30% Similarity=0.654 Sum_probs=50.9
Q ss_pred CCceeCCCCCccCCCCCC--CCCCCCCCCCCCceeCC--CCceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---
Q psy6687 31 PGVCSCPPGFQGLHCEGG--PGPGCDQKCSNGGWCDS--QQMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA--- 97 (116)
Q Consensus 31 ~~~C~c~~g~~g~~c~~~--~~~~~~~~c~~~g~c~~--~~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~--- 97 (116)
.|.|.|++||.|...+.. ...|...+|. +.|.+ .+.|.|++||. |..|. +++|. .+| +++|++
T Consensus 23 ~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C--~~~C~n~~g 98 (118)
T 1dx5_I 23 SYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDPNTQASCECPEGYILDDGFICTDIDECENGGFC--SGVCHNLPG 98 (118)
T ss_dssp CEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECTTSTTCEECCTTEEEETTTEEEECCHHHHCSSC--SSEEEECSS
T ss_pred CEEeECCCCccccCCCCCccccccCCCCCC--CcccCCCCeEeECCCCccCCCCCccccccccCCCCCC--cCeEEeCCC
Confidence 689999999998744210 0112222232 45554 37899999999 77775 44554 567 578874
Q ss_pred CCceeCCCCCcCC
Q psy6687 98 PGVCSCPPGFQGL 110 (116)
Q Consensus 98 ~~~C~C~~g~~g~ 110 (116)
.|+|.|++||++.
T Consensus 99 ~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 99 TFECICGPDSALA 111 (118)
T ss_dssp SEEEEECSSSSCE
T ss_pred CEEEECCCCCccC
Confidence 4899999999864
No 31
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.57 E-value=2.8e-08 Score=56.04 Aligned_cols=64 Identities=31% Similarity=0.797 Sum_probs=43.7
Q ss_pred CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC-CCCC---CCCCCCcEe-cC---CCceeCCCCCc----CCCC
Q psy6687 48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT-AMCF---PQCLNNGTC-TA---PGVCSCPPGFQ----GLHC 112 (116)
Q Consensus 48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~-~~c~---~~c~~~g~c-~~---~~~C~C~~g~~----g~~C 112 (116)
++++|...+|.+++.|++. +.|.|++||.|..|+. +.|. .+|.+ +| ++ ++.|.|++||+ |..|
T Consensus 47 dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C 124 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSC 124 (146)
T ss_dssp ---CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSE
T ss_pred CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcC
Confidence 5567777788888888652 6889999999888873 4554 23443 66 43 47899999988 7766
Q ss_pred C
Q psy6687 113 E 113 (116)
Q Consensus 113 ~ 113 (116)
+
T Consensus 125 ~ 125 (146)
T 1x7a_L 125 K 125 (146)
T ss_dssp E
T ss_pred C
Confidence 4
No 32
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.56 E-value=5.9e-08 Score=64.97 Aligned_cols=82 Identities=32% Similarity=0.649 Sum_probs=31.4
Q ss_pred Cce-eCCCCCccCCCCCCCCCCCCCCCCCCce------eCC-CCceecCCCCcCCCCCC------------CCCC-CCCC
Q psy6687 32 GVC-SCPPGFQGLHCEGGPGPGCDQKCSNGGW------CDS-QQMCQCPKGYQGTYCGT------------AMCF-PQCL 90 (116)
Q Consensus 32 ~~C-~c~~g~~g~~c~~~~~~~~~~~c~~~g~------c~~-~~~c~C~~g~~g~~c~~------------~~c~-~~c~ 90 (116)
..| .|.+||.|..++ ....|..-+|...+. |.. .+.|.|+++|.|..|+. ..|. .+|.
T Consensus 418 ~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~ 496 (525)
T 4aqs_A 418 ERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCD 496 (525)
T ss_dssp TTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------
T ss_pred CcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCC
Confidence 345 577788777665 223333334544444 432 36899999999999963 1233 3465
Q ss_pred CCcEec----C-CCceeCCCCCcCCCCCC
Q psy6687 91 NNGTCT----A-PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 91 ~~g~c~----~-~~~C~C~~g~~g~~C~~ 114 (116)
+++.+. . +++|.|++||+|.+|+.
T Consensus 497 ~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 497 LGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -----------------------------
T ss_pred CCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 655443 2 36899999999999973
No 33
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.51 E-value=1.2e-07 Score=51.25 Aligned_cols=76 Identities=25% Similarity=0.614 Sum_probs=47.2
Q ss_pred CCCCCCCCcEecC---CCceeCCCCCccCCCCCCCC--CCCCC--CCCCCceeCCC---CceecCCCCcCC----CCCCC
Q psy6687 18 CFPQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPG--PGCDQ--KCSNGGWCDSQ---QMCQCPKGYQGT----YCGTA 83 (116)
Q Consensus 18 c~~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~--~~~~~--~c~~~g~c~~~---~~c~C~~g~~g~----~c~~~ 83 (116)
|...|.++++|++ .|.|.|++||+|..|+..++ +|... .|.. .|++. +.|.|++||.+. .|...
T Consensus 18 C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 18 CASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp SSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred ccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 5555888899976 57999999999999985432 34321 1221 66542 689999999853 34321
Q ss_pred CCCCCCCCCcEec
Q psy6687 84 MCFPQCLNNGTCT 96 (116)
Q Consensus 84 ~c~~~c~~~g~c~ 96 (116)
-..+|.+.+.++
T Consensus 96 -~~~pC~~~~~~i 107 (114)
T 1aut_L 96 -VKFPCGRPWKRM 107 (114)
T ss_dssp -SSSCTTCCC---
T ss_pred -cccCCCCCCccC
Confidence 124676666554
No 34
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.49 E-value=2.4e-08 Score=56.07 Aligned_cols=66 Identities=29% Similarity=0.708 Sum_probs=43.8
Q ss_pred CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC--CCCC-CCCCCCc---EecC----CCceeCCCCCc----CC
Q psy6687 48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT--AMCF-PQCLNNG---TCTA----PGVCSCPPGFQ----GL 110 (116)
Q Consensus 48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~--~~c~-~~c~~~g---~c~~----~~~C~C~~g~~----g~ 110 (116)
++++|...+|.+++.|++. +.|.|++||.|..|+. ..+. .++.+++ +|++ .++|.|++||+ |.
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~ 125 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGV 125 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSS
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCC
Confidence 4555666678887888652 5788888888888874 3332 1233333 6653 47899999988 77
Q ss_pred CCC
Q psy6687 111 HCE 113 (116)
Q Consensus 111 ~C~ 113 (116)
.|+
T Consensus 126 ~C~ 128 (142)
T 2c4f_L 126 SCT 128 (142)
T ss_dssp CEE
T ss_pred CCC
Confidence 764
No 35
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.48 E-value=6.3e-08 Score=45.47 Aligned_cols=42 Identities=29% Similarity=0.575 Sum_probs=30.4
Q ss_pred cCCCCCCCCCCCCCCCCCCceeC-----C---CCceecCCCCcCCCCCCC
Q psy6687 42 GLHCEGGPGPGCDQKCSNGGWCD-----S---QQMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 42 g~~c~~~~~~~~~~~c~~~g~c~-----~---~~~c~C~~g~~g~~c~~~ 83 (116)
|..|+..+++|...||.++|+|. . .++|.|+++|.|.+|+..
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 34555567777788888888883 2 368999999999999843
No 36
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.45 E-value=1.5e-07 Score=47.92 Aligned_cols=43 Identities=42% Similarity=0.882 Sum_probs=21.8
Q ss_pred CceecCCCCc--CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcCC
Q psy6687 67 QMCQCPKGYQ--GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQGL 110 (116)
Q Consensus 67 ~~c~C~~g~~--g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g~ 110 (116)
++|.|++||. |..|. +++|. .+|.+ ++|++ .|.|.|++||+|.
T Consensus 26 y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 26 YRCECPFGYILAGNECVDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred EEEECCCCeECCCCccCCcccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence 4556666654 44443 33342 34543 35543 2566666666554
No 37
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.44 E-value=2.4e-07 Score=50.05 Aligned_cols=51 Identities=31% Similarity=0.860 Sum_probs=38.1
Q ss_pred CCCCceeCCC---CceecCCCCcCCCCCCC----CCC---CCCCCCcEecC---CCceeCCCCCcC
Q psy6687 57 CSNGGWCDSQ---QMCQCPKGYQGTYCGTA----MCF---PQCLNNGTCTA---PGVCSCPPGFQG 109 (116)
Q Consensus 57 c~~~g~c~~~---~~c~C~~g~~g~~c~~~----~c~---~~c~~~g~c~~---~~~C~C~~g~~g 109 (116)
|.++++|++. ++|.|++||.|..|+.. +|. ..|.. +|++ .|+|.|++||++
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~ 85 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKL 85 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEE
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeE
Confidence 7888999763 79999999999999842 343 12322 7764 479999999984
No 38
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.43 E-value=1.5e-08 Score=55.12 Aligned_cols=75 Identities=23% Similarity=0.606 Sum_probs=53.3
Q ss_pred CccCCCCCcCCCCCCCCCCCCCCCC---cEecC--CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCCC---Cc
Q psy6687 1 MCQCPKGYQGTYCGTAMCFPQCLNN---GTCTA--PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDSQ---QM 68 (116)
Q Consensus 1 ~C~C~~g~~g~~c~~~~c~~~c~~~---g~C~~--~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~~---~~ 68 (116)
.|.|++||+|...+...|..+|.++ +.|++ .|.|.|++||. |..|. ++++|.. .+| ++.|++. +.
T Consensus 25 ~C~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~-dideC~~~~~C--~~~C~n~~g~y~ 101 (118)
T 1dx5_I 25 LCVCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICT-DIDECENGGFC--SGVCHNLPGTFE 101 (118)
T ss_dssp EEECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEE-ECCHHHHCSSC--SSEEEECSSSEE
T ss_pred EeECCCCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccc-cccccCCCCCC--cCeEEeCCCCEE
Confidence 3789999998865444454444333 56765 57899999999 77784 6666655 567 5677643 68
Q ss_pred eecCCCCcCC
Q psy6687 69 CQCPKGYQGT 78 (116)
Q Consensus 69 c~C~~g~~g~ 78 (116)
|.|++||.+.
T Consensus 102 C~C~~G~~g~ 111 (118)
T 1dx5_I 102 CICGPDSALA 111 (118)
T ss_dssp EEECSSSSCE
T ss_pred EECCCCCccC
Confidence 9999999865
No 39
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.40 E-value=2.3e-07 Score=47.75 Aligned_cols=10 Identities=40% Similarity=1.212 Sum_probs=4.7
Q ss_pred CceeCCCCCc
Q psy6687 32 GVCSCPPGFQ 41 (116)
Q Consensus 32 ~~C~c~~g~~ 41 (116)
|.|.|++||.
T Consensus 25 y~C~C~~G~~ 34 (87)
T 1z6c_A 25 FECECPEGYR 34 (87)
T ss_dssp CCCSSSTTCE
T ss_pred EEEECCCCce
Confidence 4444444444
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.40 E-value=2.4e-08 Score=58.77 Aligned_cols=58 Identities=29% Similarity=0.771 Sum_probs=10.9
Q ss_pred CCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC---CCCC---CCCCCCcEecC---CCceeCCCCCc
Q psy6687 49 PGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT---AMCF---PQCLNNGTCTA---PGVCSCPPGFQ 108 (116)
Q Consensus 49 ~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~---~~c~---~~c~~~g~c~~---~~~C~C~~g~~ 108 (116)
++.|...+|.++|.|.+. +.|.|++||.|..|+. +.|. .+|.+ +|.+ .|.|.|++||+
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp ---------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence 444444555555555432 4566666666666653 2243 12432 4542 24566666665
No 41
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.36 E-value=2.4e-08 Score=58.72 Aligned_cols=74 Identities=28% Similarity=0.702 Sum_probs=24.6
Q ss_pred CCCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCC-CCCCCC--CCCCCceeCCC---CceecCCCCc----CCCCC
Q psy6687 16 AMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGP-GPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQ----GTYCG 81 (116)
Q Consensus 16 ~~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~-~~~~~~--~c~~~g~c~~~---~~c~C~~g~~----g~~c~ 81 (116)
+.|. .+|.++++|++ .|.|.|++||.|..|+..+ +.|... +|.+ .|.+. +.|.|++||. |..|.
T Consensus 43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp --------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCccc
Confidence 3454 35888899975 5899999999999998655 556542 3543 67542 6899999999 88887
Q ss_pred CCCCCCCCCCC
Q psy6687 82 TAMCFPQCLNN 92 (116)
Q Consensus 82 ~~~c~~~c~~~ 92 (116)
... ..+|.+.
T Consensus 121 ~~~-~~PC~~~ 130 (195)
T 1nfu_B 121 PTG-PYPCGKQ 130 (195)
T ss_dssp ESS-SSCTTCC
T ss_pred cCC-CCCCCCC
Confidence 321 2355443
No 42
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=98.35 E-value=1.9e-08 Score=46.87 Aligned_cols=38 Identities=37% Similarity=0.819 Sum_probs=27.8
Q ss_pred ceecCCCCcCCCCCCCCCCCCCCCCcEecC-------CCceeCCCCCcCCCCCC
Q psy6687 68 MCQCPKGYQGTYCGTAMCFPQCLNNGTCTA-------PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 68 ~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~-------~~~C~C~~g~~g~~C~~ 114 (116)
.|.|+++|. ..+|.++|+|.. .+.|.|++||+|.+|+.
T Consensus 4 ~C~C~~g~~---------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 4 TYKCPETFD---------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CBCCCHHHH---------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeECCCCCc---------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 566777665 257778888873 25788999999988874
No 43
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.35 E-value=8.1e-07 Score=55.86 Aligned_cols=56 Identities=32% Similarity=0.883 Sum_probs=45.3
Q ss_pred CCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCC---CCCCCCceeCCC---CceecCCCCcCC
Q psy6687 21 QCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCD---QKCSNGGWCDSQ---QMCQCPKGYQGT 78 (116)
Q Consensus 21 ~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~---~~c~~~g~c~~~---~~c~C~~g~~g~ 78 (116)
+|.+++.|.+ .+.|.|++||.|..|+.++++|.. .+|.+ .|.+. +.|.|++||.+.
T Consensus 12 pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 12 PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred CCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 5778888875 578999999999999878888875 56765 77653 789999999864
No 44
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.33 E-value=1.5e-06 Score=54.71 Aligned_cols=60 Identities=30% Similarity=0.779 Sum_probs=46.6
Q ss_pred CCCCCCCCCCCCceeCCC---CceecCCCCcCCCCC--CCCCC----CCCCCCcEecC---CCceeCCCCCcCC
Q psy6687 49 PGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG--TAMCF----PQCLNNGTCTA---PGVCSCPPGFQGL 110 (116)
Q Consensus 49 ~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~--~~~c~----~~c~~~g~c~~---~~~C~C~~g~~g~ 110 (116)
+++|...+|.+++.|... +.|.|++||.|..|+ +++|. .+|.+ .|.+ .+.|.|++||.+.
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 455667788888888753 789999999999997 45675 35765 7875 4899999999864
No 45
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.31 E-value=3.5e-07 Score=46.53 Aligned_cols=56 Identities=29% Similarity=0.751 Sum_probs=42.4
Q ss_pred CCCCCcEecC---CCceeCCCCCc--cCCCCCCCCCCC-CCCCCCCceeCCC---CceecCCCCcCCC
Q psy6687 21 QCLNNGTCTA---PGVCSCPPGFQ--GLHCEGGPGPGC-DQKCSNGGWCDSQ---QMCQCPKGYQGTY 79 (116)
Q Consensus 21 ~c~~~g~C~~---~~~C~c~~g~~--g~~c~~~~~~~~-~~~c~~~g~c~~~---~~c~C~~g~~g~~ 79 (116)
+|.+ +.|++ .|.|.|++||. |..|+ ++++|. ..+|.+ +.|.+. +.|.|++||.+..
T Consensus 13 ~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 13 VCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 5754 78876 58999999997 88885 566765 457765 578653 6899999998753
No 46
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.31 E-value=4.8e-07 Score=51.84 Aligned_cols=52 Identities=31% Similarity=0.791 Sum_probs=32.8
Q ss_pred eeCC-CCcee-cCCCCcCCCCCC---------------CCCC-CCCCCCc------EecC-CCceeCCCCCcCCCCC
Q psy6687 62 WCDS-QQMCQ-CPKGYQGTYCGT---------------AMCF-PQCLNNG------TCTA-PGVCSCPPGFQGLHCE 113 (116)
Q Consensus 62 ~c~~-~~~c~-C~~g~~g~~c~~---------------~~c~-~~c~~~g------~c~~-~~~C~C~~g~~g~~C~ 113 (116)
.|.. +++|+ |.++|.|.+|++ ..|. -.|...+ .|.. +++|.|+++|+|.+|+
T Consensus 69 ~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 69 NCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp CBCTTTCCBCCBCTTEETTTTCEECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred cccCCCCcccCCCCCCcCCCcCcCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence 4543 36774 777777777763 0111 1344443 5653 5789999999999986
No 47
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.30 E-value=2.9e-07 Score=49.18 Aligned_cols=66 Identities=35% Similarity=0.676 Sum_probs=21.9
Q ss_pred CCCcCCCCCCCCCCC---CCCCCcEecC---CCceeCCCCCcc---CCCCCCCCCCCC-CCCCCCceeCCC---CceecC
Q psy6687 6 KGYQGTYCGTAMCFP---QCLNNGTCTA---PGVCSCPPGFQG---LHCEGGPGPGCD-QKCSNGGWCDSQ---QMCQCP 72 (116)
Q Consensus 6 ~g~~g~~c~~~~c~~---~c~~~g~C~~---~~~C~c~~g~~g---~~c~~~~~~~~~-~~c~~~g~c~~~---~~c~C~ 72 (116)
.+|+|+.|..++|.. .|. ..|++ .|.|.|++||.+ ..|+ ++++|.. .+|. +.|++. +.|.|+
T Consensus 20 ~~~~~~~Cd~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~ 94 (107)
T 2w2n_E 20 NLYFQGAMGTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCE 94 (107)
T ss_dssp CCCCSCCBSCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C----------------------------
T ss_pred CCcCCCCCcCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEECC
Confidence 456666666555542 132 25543 466777777765 4554 4444432 2332 334331 445555
Q ss_pred CCCc
Q psy6687 73 KGYQ 76 (116)
Q Consensus 73 ~g~~ 76 (116)
+||.
T Consensus 95 ~Gy~ 98 (107)
T 2w2n_E 95 EGFQ 98 (107)
T ss_dssp ----
T ss_pred CCce
Confidence 5554
No 48
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.30 E-value=5.3e-08 Score=54.11 Aligned_cols=64 Identities=30% Similarity=0.764 Sum_probs=18.2
Q ss_pred CCCCCCCCCCCCCceeCCC---CceecCCCCcCCCCCC---CCCC---CCCCCCcEecC---CCceeCCCCCc----CCC
Q psy6687 48 GPGPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGT---AMCF---PQCLNNGTCTA---PGVCSCPPGFQ----GLH 111 (116)
Q Consensus 48 ~~~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~---~~c~---~~c~~~g~c~~---~~~C~C~~g~~----g~~ 111 (116)
+++.|...+|.+++.|++. +.|.|++||.|..|+. +.|. .+|.+ +|++ .+.|.|++||+ |..
T Consensus 41 d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~ 118 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKA 118 (134)
T ss_dssp ----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSC
T ss_pred CcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCc
Confidence 4556666678887888652 6788888888888874 3354 23543 6653 36788988888 777
Q ss_pred CC
Q psy6687 112 CE 113 (116)
Q Consensus 112 C~ 113 (116)
|+
T Consensus 119 C~ 120 (134)
T 2vh0_B 119 CI 120 (134)
T ss_dssp EE
T ss_pred cC
Confidence 64
No 49
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.29 E-value=3.1e-07 Score=61.54 Aligned_cols=79 Identities=22% Similarity=0.512 Sum_probs=26.2
Q ss_pred cCCCCCcCCCCCCC-CCCC-CCCCC------cEecC-CCceeCCCCCccCCCCC----------CCCCCCCCCCCCCcee
Q psy6687 3 QCPKGYQGTYCGTA-MCFP-QCLNN------GTCTA-PGVCSCPPGFQGLHCEG----------GPGPGCDQKCSNGGWC 63 (116)
Q Consensus 3 ~C~~g~~g~~c~~~-~c~~-~c~~~------g~C~~-~~~C~c~~g~~g~~c~~----------~~~~~~~~~c~~~g~c 63 (116)
.|.+||+|..++.. .|.. +|... +.|.. ++.|.|.++|.|..|+. .++.|..-+|.++|.+
T Consensus 422 ~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~ 501 (525)
T 4aqs_A 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGAL 501 (525)
T ss_dssp EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--------------------------
T ss_pred CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCcc
Confidence 35555555544321 2321 24443 34432 57899999999999963 2233444456666654
Q ss_pred CC-----CCceecCCCCcCCCCC
Q psy6687 64 DS-----QQMCQCPKGYQGTYCG 81 (116)
Q Consensus 64 ~~-----~~~c~C~~g~~g~~c~ 81 (116)
.. +++|.|++||.|..|+
T Consensus 502 ~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 502 NNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp -----------------------
T ss_pred CCccCCCCCeeECCCCCcCCCCC
Confidence 32 2589999999999986
No 50
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.25 E-value=4.8e-07 Score=40.73 Aligned_cols=28 Identities=32% Similarity=0.781 Sum_probs=20.3
Q ss_pred CCCCCcEec-----CCCceeCCCCCcCCCCCCC
Q psy6687 88 QCLNNGTCT-----APGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 88 ~c~~~g~c~-----~~~~C~C~~g~~g~~C~~~ 115 (116)
+|.++|+|. ..+.|.|++||+|.+|+.+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 677777775 2367888888888888754
No 51
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=98.25 E-value=1.1e-06 Score=50.93 Aligned_cols=37 Identities=46% Similarity=1.100 Sum_probs=32.6
Q ss_pred CCCCCCCCCCCCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 78 TYCGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 78 ~~c~~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
..|..++|...|.++|.|+....|.|++||.|..|+.
T Consensus 144 K~C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 144 KTCQQAECPGGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp EEECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred ccccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 4566678888999999999889999999999999985
No 52
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.24 E-value=1.4e-06 Score=37.90 Aligned_cols=27 Identities=48% Similarity=1.136 Sum_probs=18.5
Q ss_pred CCCCCCcEecC---CCceeCCCCCcCCCCC
Q psy6687 87 PQCLNNGTCTA---PGVCSCPPGFQGLHCE 113 (116)
Q Consensus 87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~ 113 (116)
.+|.++++|++ .+.|.|++||+|.+|+
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 46666677753 3577777777777776
No 53
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.23 E-value=2.5e-07 Score=51.89 Aligned_cols=62 Identities=34% Similarity=0.873 Sum_probs=44.8
Q ss_pred CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCCCCCCCc---eeCC----CCceecCCCCc----CCCCC
Q psy6687 20 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQKCSNGG---WCDS----QQMCQCPKGYQ----GTYCG 81 (116)
Q Consensus 20 ~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g---~c~~----~~~c~C~~g~~----g~~c~ 81 (116)
.+|.++++|++ .|.|.|++||+|..|+..++.+...++.+++ .|++ .+.|.|++||. |..|.
T Consensus 53 ~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 53 SPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred CCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence 36888899975 4789999999999998544443222333444 6653 36899999998 77776
No 54
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.22 E-value=5.7e-07 Score=50.66 Aligned_cols=62 Identities=32% Similarity=0.858 Sum_probs=45.6
Q ss_pred CCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCCCCCCCC--CCCCCcee-CC---CCceecCCCCc----CCCCC
Q psy6687 17 MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGPGPGCDQ--KCSNGGWC-DS---QQMCQCPKGYQ----GTYCG 81 (116)
Q Consensus 17 ~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~~~~~~~--~c~~~g~c-~~---~~~c~C~~g~~----g~~c~ 81 (116)
.|. .+|.++++|++ .|.|.|++||+|..|+. +++|... +|.. .| .+ .+.|.|++||. |..|+
T Consensus 50 eC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~-~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 50 QCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCEL-DATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCE-ECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred cCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCC-CccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence 453 36888899975 57899999999999974 3555542 3443 67 44 37899999998 77776
No 55
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.21 E-value=9.4e-08 Score=53.11 Aligned_cols=63 Identities=32% Similarity=0.832 Sum_probs=19.8
Q ss_pred CCC-CCCCCCcEecC---CCceeCCCCCccCCCCCCC-CCCCCC--CCCCCceeCCC---CceecCCCCc----CCCCC
Q psy6687 17 MCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGP-GPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQ----GTYCG 81 (116)
Q Consensus 17 ~c~-~~c~~~g~C~~---~~~C~c~~g~~g~~c~~~~-~~~~~~--~c~~~g~c~~~---~~c~C~~g~~----g~~c~ 81 (116)
.|. .+|.++++|++ .|.|.|++||+|..|+..+ +.|... +|.+ .|.+. +.|.|++||. |..|.
T Consensus 44 ~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 44 QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp -------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccC
Confidence 453 35888889975 5789999999999998655 555442 3443 66542 6899999999 77776
No 56
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.19 E-value=1.9e-06 Score=40.09 Aligned_cols=28 Identities=36% Similarity=0.923 Sum_probs=17.7
Q ss_pred CCCCCcEec--C---CCceeCCCCCcCCCCCCC
Q psy6687 88 QCLNNGTCT--A---PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 88 ~c~~~g~c~--~---~~~C~C~~g~~g~~C~~~ 115 (116)
+|.++|+|. + .+.|.|++||+|.+|+.+
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 566666665 2 356777777777777643
No 57
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.11 E-value=4.5e-07 Score=46.53 Aligned_cols=43 Identities=35% Similarity=0.833 Sum_probs=24.1
Q ss_pred CceecCCCCc-----CCCCC-CCCCC-CC--CCCCcEecC---CCceeCCCCCcCC
Q psy6687 67 QMCQCPKGYQ-----GTYCG-TAMCF-PQ--CLNNGTCTA---PGVCSCPPGFQGL 110 (116)
Q Consensus 67 ~~c~C~~g~~-----g~~c~-~~~c~-~~--c~~~g~c~~---~~~C~C~~g~~g~ 110 (116)
+.|.|++||. |..|. +++|. .+ |. +++|++ +|+|.|++||++.
T Consensus 25 y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 25 FECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp EEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred EEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 4666666665 44443 33443 22 44 356653 3677777777654
No 58
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.06 E-value=3.3e-06 Score=36.67 Aligned_cols=32 Identities=34% Similarity=0.857 Sum_probs=17.3
Q ss_pred CCCCCCCCCCCceeCCC---CceecCCCCcCCCCC
Q psy6687 50 GPGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCG 81 (116)
Q Consensus 50 ~~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~ 81 (116)
++|...+|.++|.|.+. +.|.|++||.|..|+
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 33444555555555431 456666666666554
No 59
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=98.05 E-value=4.5e-06 Score=48.42 Aligned_cols=34 Identities=47% Similarity=1.150 Sum_probs=16.2
Q ss_pred CCCCCCCCCCCCCcEecCCCceeCCCCCccCCCC
Q psy6687 13 CGTAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 46 (116)
Q Consensus 13 c~~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~ 46 (116)
|....|...|.++|.|+....|.|++||.|..|+
T Consensus 146 C~~~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 146 CQQAECPGGCRNGGFCNERRICECPDGFHGPHCE 179 (188)
T ss_dssp ECCCCCTTCCCTTCEECTTSCEECCTTCBTTTTC
T ss_pred ccCCccCCCCCCCCEeCCCCcccCcCCCCCCCCc
Confidence 3333444445555555444445555555555544
No 60
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.01 E-value=1.5e-06 Score=41.95 Aligned_cols=27 Identities=41% Similarity=1.091 Sum_probs=15.0
Q ss_pred CCCCCCcEecC--------CCceeCCCCCcCCCCC
Q psy6687 87 PQCLNNGTCTA--------PGVCSCPPGFQGLHCE 113 (116)
Q Consensus 87 ~~c~~~g~c~~--------~~~C~C~~g~~g~~C~ 113 (116)
.+|.++|+|.. .+.|.|++||+|.+|+
T Consensus 12 ~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce 46 (63)
T 1hae_A 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred CcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence 35555555542 2456666666666665
No 61
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.01 E-value=1.8e-07 Score=53.58 Aligned_cols=29 Identities=28% Similarity=0.662 Sum_probs=20.9
Q ss_pred CCCCC---CCCCCCcEecC---CCceeCCCCCcCCC
Q psy6687 82 TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLH 111 (116)
Q Consensus 82 ~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~ 111 (116)
+++|. .+|.+ ++|++ +|+|.|++||+|..
T Consensus 122 ideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 122 IDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp CCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred cccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 44554 35865 68874 48999999998864
No 62
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.95 E-value=5.9e-08 Score=54.68 Aligned_cols=44 Identities=36% Similarity=0.692 Sum_probs=33.2
Q ss_pred CceecCCCCc---CCCCC-CCCCC---CCCCCCcEecC---CCceeCCCCCcCCC
Q psy6687 67 QMCQCPKGYQ---GTYCG-TAMCF---PQCLNNGTCTA---PGVCSCPPGFQGLH 111 (116)
Q Consensus 67 ~~c~C~~g~~---g~~c~-~~~c~---~~c~~~g~c~~---~~~C~C~~g~~g~~ 111 (116)
+.|.|++||. |..|+ +++|. .+|.+ ++|++ +|+|.|++||++..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 5678999995 88886 55665 34875 58874 48999999998764
No 63
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.92 E-value=2e-06 Score=49.25 Aligned_cols=80 Identities=33% Similarity=0.727 Sum_probs=49.3
Q ss_pred c-cCCCCCcCCCCCC-------CCCC---------C-CCCCC------cEecC-CCcee-CCCCCccCCCCCC-------
Q psy6687 2 C-QCPKGYQGTYCGT-------AMCF---------P-QCLNN------GTCTA-PGVCS-CPPGFQGLHCEGG------- 48 (116)
Q Consensus 2 C-~C~~g~~g~~c~~-------~~c~---------~-~c~~~------g~C~~-~~~C~-c~~g~~g~~c~~~------- 48 (116)
| .|+.+|+|.+|+. ..+. . .|.++ +.|.. ++.|+ |.++|+|..|+.=
T Consensus 20 C~~C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~C~~Gy~g~ 99 (162)
T 1klo_A 20 CTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGN 99 (162)
T ss_dssp ECSCCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCEECTTEEEC
T ss_pred eCCCCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCcCchhhcCC
Confidence 5 6888999998874 0111 1 24443 45653 67894 9999999888620
Q ss_pred -C-----CCCCCCCCCCCc------eeCC-CCceecCCCCcCCCCC
Q psy6687 49 -P-----GPGCDQKCSNGG------WCDS-QQMCQCPKGYQGTYCG 81 (116)
Q Consensus 49 -~-----~~~~~~~c~~~g------~c~~-~~~c~C~~g~~g~~c~ 81 (116)
. ..|..-.|...| .|.. +++|.|.++|.|..|+
T Consensus 100 ~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 100 PLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp TTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred ccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence 0 111112344443 5654 3788899999888887
No 64
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.92 E-value=5.6e-06 Score=37.34 Aligned_cols=28 Identities=36% Similarity=0.922 Sum_probs=18.6
Q ss_pred CCCCCCcEecC-----CCceeCCCCCcCCCCCCC
Q psy6687 87 PQCLNNGTCTA-----PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 87 ~~c~~~g~c~~-----~~~C~C~~g~~g~~C~~~ 115 (116)
.+|.+ |+|.. .+.|.|++||+|.+|+.+
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 36666 67751 357777888888777754
No 65
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.89 E-value=6.1e-07 Score=41.65 Aligned_cols=14 Identities=50% Similarity=1.265 Sum_probs=7.0
Q ss_pred ceeCCCCCccCCCC
Q psy6687 33 VCSCPPGFQGLHCE 46 (116)
Q Consensus 33 ~C~c~~g~~g~~c~ 46 (116)
.|.|+++|+|..|+
T Consensus 34 ~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 34 SCECAIGFMGQRCE 47 (52)
T ss_dssp EEECCTTEESTTSC
T ss_pred EEECCCCCcCCCCc
Confidence 45555555555444
No 66
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.81 E-value=3.2e-06 Score=39.35 Aligned_cols=28 Identities=32% Similarity=0.860 Sum_probs=18.7
Q ss_pred CCCCCCcEec--C---CCceeCCCCCcCCCCCC
Q psy6687 87 PQCLNNGTCT--A---PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 87 ~~c~~~g~c~--~---~~~C~C~~g~~g~~C~~ 114 (116)
.+|.++|+|. . .+.|.|++||+|.+|+.
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 4566777775 2 25777777777777764
No 67
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.79 E-value=1.8e-05 Score=36.72 Aligned_cols=27 Identities=44% Similarity=0.993 Sum_probs=17.2
Q ss_pred CCCCCceeC--C---CCceecCCCCcCCCCCC
Q psy6687 56 KCSNGGWCD--S---QQMCQCPKGYQGTYCGT 82 (116)
Q Consensus 56 ~c~~~g~c~--~---~~~c~C~~g~~g~~c~~ 82 (116)
+|.++|+|. . .+.|.|++||+|..|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 566666665 2 24677777777777764
No 68
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.76 E-value=6.6e-06 Score=42.20 Aligned_cols=45 Identities=29% Similarity=0.767 Sum_probs=32.1
Q ss_pred CceecCCCCc----CCCCC-CCCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCC
Q psy6687 67 QMCQCPKGYQ----GTYCG-TAMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 67 ~~c~C~~g~~----g~~c~-~~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~ 114 (116)
+.|.|++||. |..|+ +++|. .+|. ++|++ +|+|.|+ ++.|..++.
T Consensus 25 y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~~ 78 (87)
T 1z6c_A 25 FECECPEGYRYNLKSKSCEDIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLAQ 78 (87)
T ss_dssp CCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCCT
T ss_pred EEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCcccC
Confidence 7899999998 66775 44554 5676 57875 4899997 666655543
No 69
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.74 E-value=4.4e-06 Score=44.57 Aligned_cols=68 Identities=26% Similarity=0.495 Sum_probs=24.9
Q ss_pred CCCCccCCCCCCCCCCCCC--CCCCCceeCC---CCceecCCCCcC---CCCC-CCCCC--CCCCCCcEecC---CCcee
Q psy6687 37 PPGFQGLHCEGGPGPGCDQ--KCSNGGWCDS---QQMCQCPKGYQG---TYCG-TAMCF--PQCLNNGTCTA---PGVCS 102 (116)
Q Consensus 37 ~~g~~g~~c~~~~~~~~~~--~c~~~g~c~~---~~~c~C~~g~~g---~~c~-~~~c~--~~c~~~g~c~~---~~~C~ 102 (116)
..+|.+..|+ +++|... .|. ..|.+ .+.|.|++||.+ ..|+ +++|. .+|. ++|++ +|.|.
T Consensus 19 ~~~~~~~~Cd--~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~ 92 (107)
T 2w2n_E 19 ENLYFQGAMG--TNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ 92 (107)
T ss_dssp -CCCCSCCBS--CCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC--------------------------
T ss_pred CCCcCCCCCc--CccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEE
Confidence 4567777774 3444321 232 25654 379999999987 6675 45665 4564 57764 48999
Q ss_pred CCCCCcCC
Q psy6687 103 CPPGFQGL 110 (116)
Q Consensus 103 C~~g~~g~ 110 (116)
|++||.+.
T Consensus 93 C~~Gy~~~ 100 (107)
T 2w2n_E 93 CEEGFQLD 100 (107)
T ss_dssp --------
T ss_pred CCCCceEC
Confidence 99999865
No 70
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.66 E-value=2e-05 Score=51.42 Aligned_cols=81 Identities=23% Similarity=0.542 Sum_probs=17.7
Q ss_pred CceeCCCCCccCCCCCCCCCCCCCCCCCCceeC----CCCcee-cCCCCcCCCCCCCCCCCCCCCCcEecCCCceeCCCC
Q psy6687 32 GVCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCD----SQQMCQ-CPKGYQGTYCGTAMCFPQCLNNGTCTAPGVCSCPPG 106 (116)
Q Consensus 32 ~~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~----~~~~c~-C~~g~~g~~c~~~~c~~~c~~~g~c~~~~~C~C~~g 106 (116)
+.|.|..++.|..|+.-...-...++..+..+. ....|. |.-++.|..|+... .+|.++++|....+|.|++|
T Consensus 313 ~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t--~~C~ngg~C~~~~~C~C~~G 390 (426)
T 3zyj_B 313 LTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL--LHCQNGGTCHNNVRCLCPAA 390 (426)
T ss_dssp EEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred ceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc--ccCCCCCCcCCCCCCcCCCC
Confidence 478888888888887321111111222221110 012332 33334455665321 46777777775557788888
Q ss_pred CcCCCCCC
Q psy6687 107 FQGLHCEG 114 (116)
Q Consensus 107 ~~g~~C~~ 114 (116)
|+|..|+.
T Consensus 391 ~~G~~Ce~ 398 (426)
T 3zyj_B 391 YTGILCEK 398 (426)
T ss_dssp --------
T ss_pred CcCCCCcC
Confidence 88877753
No 71
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.66 E-value=3.3e-05 Score=34.55 Aligned_cols=27 Identities=41% Similarity=0.849 Sum_probs=18.8
Q ss_pred CCCCCceeC--C---CCceecCCCCcCCCCCC
Q psy6687 56 KCSNGGWCD--S---QQMCQCPKGYQGTYCGT 82 (116)
Q Consensus 56 ~c~~~g~c~--~---~~~c~C~~g~~g~~c~~ 82 (116)
+|.++|+|. . .+.|.|++||+|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 677777775 2 25788888888877764
No 72
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.63 E-value=2.8e-05 Score=37.40 Aligned_cols=32 Identities=34% Similarity=0.844 Sum_probs=23.8
Q ss_pred CCCCCcEecC--------CCceeCCCCCccCCCCCCCCCC
Q psy6687 21 QCLNNGTCTA--------PGVCSCPPGFQGLHCEGGPGPG 52 (116)
Q Consensus 21 ~c~~~g~C~~--------~~~C~c~~g~~g~~c~~~~~~~ 52 (116)
+|.++|+|+. .+.|.|++||+|..|+..++.+
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~ 52 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSS
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcc
Confidence 5888888862 4678888888888887555444
No 73
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.56 E-value=3.6e-05 Score=34.64 Aligned_cols=16 Identities=38% Similarity=1.090 Sum_probs=9.0
Q ss_pred CceecCCCCcCCCCCC
Q psy6687 67 QMCQCPKGYQGTYCGT 82 (116)
Q Consensus 67 ~~c~C~~g~~g~~c~~ 82 (116)
+.|.|++||+|.+|+.
T Consensus 28 ~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 28 NYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EEEEECTTCSSTTSCC
T ss_pred EEEECCCCCccCCCCc
Confidence 4556666666655553
No 74
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.55 E-value=3.3e-06 Score=43.22 Aligned_cols=54 Identities=30% Similarity=0.727 Sum_probs=38.7
Q ss_pred CCCCcEecC---CCceeCCCCCc-----cCCCCCCCCCCCCCC--CCCCceeCCC---CceecCCCCcCC
Q psy6687 22 CLNNGTCTA---PGVCSCPPGFQ-----GLHCEGGPGPGCDQK--CSNGGWCDSQ---QMCQCPKGYQGT 78 (116)
Q Consensus 22 c~~~g~C~~---~~~C~c~~g~~-----g~~c~~~~~~~~~~~--c~~~g~c~~~---~~c~C~~g~~g~ 78 (116)
|.+ ++|++ .|.|.|++||. |..|+ ++++|...+ |. ++.|.+. +.|.|++||.+.
T Consensus 13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred CCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 643 57865 47899999998 66675 566665444 54 4688653 789999999865
No 75
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.47 E-value=4.6e-05 Score=49.76 Aligned_cols=94 Identities=28% Similarity=0.689 Sum_probs=17.6
Q ss_pred ccCCCCCcCCCCCCCCCCC-----CCCCCcEe-c---CCCcee-CCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceec
Q psy6687 2 CQCPKGYQGTYCGTAMCFP-----QCLNNGTC-T---APGVCS-CPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQC 71 (116)
Q Consensus 2 C~C~~g~~g~~c~~~~c~~-----~c~~~g~C-~---~~~~C~-c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C 71 (116)
|.|..++.|..|+. |.. ++..+..+ + ..+.|. |.-.+.|..|+... .+|.++|.|....+|.|
T Consensus 315 C~C~~~ttG~~CE~--C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t-----~~C~ngg~C~~~~~C~C 387 (426)
T 3zyj_B 315 CECEHNTTGPDCGK--CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNEL-----LHCQNGGTCHNNVRCLC 387 (426)
T ss_dssp ECCCTTEESSSSCE--ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------------------------
T ss_pred eeCCCCCcCCCccc--cccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCc-----ccCCCCCCcCCCCCCcC
Confidence 78889999999874 322 23222111 0 123443 33344567776432 47888888877568999
Q ss_pred CCCCcCCCCCCCCCCCCCCCCcEecC-CCceeCCCC
Q psy6687 72 PKGYQGTYCGTAMCFPQCLNNGTCTA-PGVCSCPPG 106 (116)
Q Consensus 72 ~~g~~g~~c~~~~c~~~c~~~g~c~~-~~~C~C~~g 106 (116)
++||.|..|+.. .|.++|+|.. +++|.-+.|
T Consensus 388 ~~G~~G~~Ce~c----~C~~~g~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 388 PAAYTGILCEKL----RCEEAGSCGSDSGQGAPPHG 419 (426)
T ss_dssp ------------------------------------
T ss_pred CCCCcCCCCcCC----CCCCCCcccCCCCccCCCCC
Confidence 999999999864 4556777763 356655444
No 76
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.37 E-value=4.9e-05 Score=36.29 Aligned_cols=27 Identities=30% Similarity=0.763 Sum_probs=14.6
Q ss_pred CCCCCC--cEecC---CCceeCCCCCc-CCCCC
Q psy6687 87 PQCLNN--GTCTA---PGVCSCPPGFQ-GLHCE 113 (116)
Q Consensus 87 ~~c~~~--g~c~~---~~~C~C~~g~~-g~~C~ 113 (116)
.||.++ |+|++ .|.|.|++||+ |.+|+
T Consensus 17 nPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 17 NPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 455555 55542 24566666666 65554
No 77
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.37 E-value=2.2e-05 Score=54.15 Aligned_cols=45 Identities=22% Similarity=0.564 Sum_probs=39.7
Q ss_pred cCCCCCcCCCCC-CCCCCCCCCCCcEecCCCceeCCCCCccCCCCCC
Q psy6687 3 QCPKGYQGTYCG-TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCEGG 48 (116)
Q Consensus 3 ~C~~g~~g~~c~-~~~c~~~c~~~g~C~~~~~C~c~~g~~g~~c~~~ 48 (116)
.|.++|.|++|. ...|...|.++|+|+. +.|.|.+||.|..|...
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSCEE
T ss_pred ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcCcc
Confidence 588999999998 4678888999999996 89999999999999743
No 78
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.37 E-value=5.4e-05 Score=35.77 Aligned_cols=27 Identities=41% Similarity=0.893 Sum_probs=21.6
Q ss_pred CCCCCcEec-----C--CCceeCCCCCcCCCCCC
Q psy6687 88 QCLNNGTCT-----A--PGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 88 ~c~~~g~c~-----~--~~~C~C~~g~~g~~C~~ 114 (116)
+|.++|+|. . .+.|.|++||+|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 788888886 1 25799999999999974
No 79
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.16 E-value=0.00024 Score=46.09 Aligned_cols=52 Identities=35% Similarity=0.717 Sum_probs=35.2
Q ss_pred CCcEecC---CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCCC---CceecCCCCcCC
Q psy6687 24 NNGTCTA---PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDSQ---QMCQCPKGYQGT 78 (116)
Q Consensus 24 ~~g~C~~---~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~~---~~c~C~~g~~g~ 78 (116)
....|.+ .|.|.|++||. |..|+ ++++|.. .+|.. .|.+. +.|.|.+||.+.
T Consensus 10 c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 10 CSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 3457865 57899999997 67775 6666652 34543 55542 688888888754
No 80
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.08 E-value=0.00012 Score=33.91 Aligned_cols=28 Identities=32% Similarity=0.860 Sum_probs=20.7
Q ss_pred CCCCCCcEec--C---CCceeCCCCCccCCCCC
Q psy6687 20 PQCLNNGTCT--A---PGVCSCPPGFQGLHCEG 47 (116)
Q Consensus 20 ~~c~~~g~C~--~---~~~C~c~~g~~g~~c~~ 47 (116)
.+|.++|+|. . .+.|.|++||+|..|+.
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCc
Confidence 3577888885 2 36788888888888874
No 81
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.05 E-value=6.5e-05 Score=51.86 Aligned_cols=43 Identities=23% Similarity=0.609 Sum_probs=34.9
Q ss_pred ecCCCCcCCCCC-CCCCCCCCCCCcEecCCCceeCCCCCcCCCCC
Q psy6687 70 QCPKGYQGTYCG-TAMCFPQCLNNGTCTAPGVCSCPPGFQGLHCE 113 (116)
Q Consensus 70 ~C~~g~~g~~c~-~~~c~~~c~~~g~c~~~~~C~C~~g~~g~~C~ 113 (116)
.|.++|.|..|. ...|+..|..+|.|+. ++|.|.+||.|..|.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~-G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQ-GSCVCDEQWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEET-TEEEECTTEESTTSC
T ss_pred ccCCCcccccccccCCCCcccCCCcEECC-CCEeeCCCccCCCcC
Confidence 578888888888 3677778888888886 788888888888886
No 82
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.01 E-value=5e-05 Score=36.28 Aligned_cols=32 Identities=22% Similarity=0.625 Sum_probs=17.1
Q ss_pred CCCCCCCCCCC--ceeCCC---CceecCCCCc-CCCCC
Q psy6687 50 GPGCDQKCSNG--GWCDSQ---QMCQCPKGYQ-GTYCG 81 (116)
Q Consensus 50 ~~~~~~~c~~~--g~c~~~---~~c~C~~g~~-g~~c~ 81 (116)
++|...||.++ |+|.+. +.|.|++||. |..|+
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 33444455555 555432 4566666666 66554
No 83
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.95 E-value=0.00018 Score=46.42 Aligned_cols=47 Identities=30% Similarity=0.866 Sum_probs=11.1
Q ss_pred EecC---CCceeCCCCCc----cCCCCCCCCCCC-CCCCCCCceeCCC---CceecCCCCc
Q psy6687 27 TCTA---PGVCSCPPGFQ----GLHCEGGPGPGC-DQKCSNGGWCDSQ---QMCQCPKGYQ 76 (116)
Q Consensus 27 ~C~~---~~~C~c~~g~~----g~~c~~~~~~~~-~~~c~~~g~c~~~---~~c~C~~g~~ 76 (116)
.|.+ .|.|.|++||. |..|+ ++++|. ..+|.+. |.+. +.|.|.+||.
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAEEGYCSQG--CTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp -------------------------------------CCTTE--EC-----CCEECCTTEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccC-ccceeCCcCcccCc--CCCCCCCCeEEECCCce
Confidence 5653 36788888887 77774 566664 3456542 6542 6788888775
No 84
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.92 E-value=0.011 Score=41.22 Aligned_cols=41 Identities=34% Similarity=0.799 Sum_probs=30.3
Q ss_pred CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687 67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG 109 (116)
Q Consensus 67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g 109 (116)
+.|.|++||. +..|+ +++|. .+|. ..|.+ +|.|.|++||++
T Consensus 315 ~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 315 YECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred cEEeCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence 7899999998 66776 56665 3454 25553 489999999975
No 85
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.82 E-value=0.00012 Score=41.60 Aligned_cols=33 Identities=42% Similarity=0.853 Sum_probs=25.0
Q ss_pred CCCC-CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687 83 AMCF-PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 83 ~~c~-~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~ 115 (116)
..|. .+|.++++|++ .++|.|++||.|..||.+
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 3444 46777888874 478999999999999854
No 86
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=96.79 E-value=0.0012 Score=30.13 Aligned_cols=27 Identities=33% Similarity=0.924 Sum_probs=18.7
Q ss_pred CCCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687 87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~ 114 (116)
..|.++ +|. +...|.|++||+|++|+.
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 345554 664 236888899999988874
No 87
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.73 E-value=0.00055 Score=32.26 Aligned_cols=27 Identities=41% Similarity=0.893 Sum_probs=20.3
Q ss_pred CCCCCcEec-----C--CCceeCCCCCccCCCCC
Q psy6687 21 QCLNNGTCT-----A--PGVCSCPPGFQGLHCEG 47 (116)
Q Consensus 21 ~c~~~g~C~-----~--~~~C~c~~g~~g~~c~~ 47 (116)
+|.++|+|. . .+.|.|++||+|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 577888886 2 35788888888888873
No 88
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.58 E-value=0.0016 Score=42.30 Aligned_cols=41 Identities=34% Similarity=0.813 Sum_probs=23.7
Q ss_pred CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687 67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG 109 (116)
Q Consensus 67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g 109 (116)
+.|.|++||. |..|+ +++|. .+|.+ .|.+ +|.|.|.+||.+
T Consensus 21 y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~ 70 (400)
T 3p5b_L 21 YECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQL 70 (400)
T ss_dssp EEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred eEEECCCCCCcCCCCcccCchhhhccCCCCC--ccCCCccceeeeccccccc
Confidence 5677777776 55564 44554 34543 4543 367777777754
No 89
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.57 E-value=0.00048 Score=31.45 Aligned_cols=26 Identities=35% Similarity=1.013 Sum_probs=17.5
Q ss_pred CCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687 88 QCLNNGTCT-----APGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 88 ~c~~~g~c~-----~~~~C~C~~g~~g~~C~~ 114 (116)
.|.+ |+|. ....|.|++||+|.+|+.
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 4555 5663 125688888888888874
No 90
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.50 E-value=0.00093 Score=41.46 Aligned_cols=55 Identities=33% Similarity=0.849 Sum_probs=41.2
Q ss_pred CCCCceeCCCCceecCCCCcCCCCCC--C---------CCC-----CCCCCCcEecCCCceeCCCCC------cCCCCC
Q psy6687 57 CSNGGWCDSQQMCQCPKGYQGTYCGT--A---------MCF-----PQCLNNGTCTAPGVCSCPPGF------QGLHCE 113 (116)
Q Consensus 57 c~~~g~c~~~~~c~C~~g~~g~~c~~--~---------~c~-----~~c~~~g~c~~~~~C~C~~g~------~g~~C~ 113 (116)
|..+|.+.- +.|.|.+||.|..|+- . .|. ..|+++|.|+- ++|.|...+ .|.+|+
T Consensus 198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~~~~~~~~G~~~~ 274 (280)
T 2p26_A 198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSDVPGKLIYGQYCE 274 (280)
T ss_dssp GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCSSTTCEEESTTSC
T ss_pred cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCCCCCeeEeeEecc
Confidence 666777765 7899999999999971 1 464 14888899986 899996664 566665
No 91
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.44 E-value=0.00015 Score=41.30 Aligned_cols=81 Identities=27% Similarity=0.653 Sum_probs=46.9
Q ss_pred CCCCCCcEecC---CCceeCCCCCc----cCCCCCCCCC--CCCC--CC--CCCceeCC-------CCceecCCCCc-CC
Q psy6687 20 PQCLNNGTCTA---PGVCSCPPGFQ----GLHCEGGPGP--GCDQ--KC--SNGGWCDS-------QQMCQCPKGYQ-GT 78 (116)
Q Consensus 20 ~~c~~~g~C~~---~~~C~c~~g~~----g~~c~~~~~~--~~~~--~c--~~~g~c~~-------~~~c~C~~g~~-g~ 78 (116)
.+|. +++|++ .|+|.|++||. |..|+ ++++ |... ++ ..++.|.+ .+.|.|++||. +.
T Consensus 10 ~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~ 87 (162)
T 1uzk_A 10 TTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGT 87 (162)
T ss_dssp TSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETT
T ss_pred CCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCC
Confidence 3575 589976 58999999998 77887 4433 3221 12 12445543 26788999986 33
Q ss_pred CCCCCCCCCCCCCCcEecCCCceeCCC--CCcCC
Q psy6687 79 YCGTAMCFPQCLNNGTCTAPGVCSCPP--GFQGL 110 (116)
Q Consensus 79 ~c~~~~c~~~c~~~g~c~~~~~C~C~~--g~~g~ 110 (116)
.|+ .|.... ...++|.|++ ||++.
T Consensus 88 ~C~------~C~~~~--~~~y~C~C~~g~G~~~~ 113 (162)
T 1uzk_A 88 PCE------MCPAVN--TSEYKILCPGGEGFRPN 113 (162)
T ss_dssp TTE------ECCCTT--SHHHHHHCTTCTTEEEC
T ss_pred Ccc------cCCCCC--CCCceeECCCCCCcccC
Confidence 332 232211 0137899987 88875
No 92
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.40 E-value=0.0016 Score=40.45 Aligned_cols=52 Identities=29% Similarity=0.649 Sum_probs=38.3
Q ss_pred CCCCcEecCCCceeCCCCCccCCCCCCCC---------CCCC----CCCCCCceeCCCCceecCCCC
Q psy6687 22 CLNNGTCTAPGVCSCPPGFQGLHCEGGPG---------PGCD----QKCSNGGWCDSQQMCQCPKGY 75 (116)
Q Consensus 22 c~~~g~C~~~~~C~c~~g~~g~~c~~~~~---------~~~~----~~c~~~g~c~~~~~c~C~~g~ 75 (116)
|.++|.+.. +.|.|.+||.|..|+-... .|.. ..|+.+|.|.- +.|.|..++
T Consensus 198 C~g~G~~~C-G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~C-G~C~C~~~~ 262 (280)
T 2p26_A 198 CHGKGFLEC-GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-GQCLCHTSD 262 (280)
T ss_dssp GGGSEEEET-TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEET-TEEEECCCS
T ss_pred cCCCCeECC-CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeC-CeeECcCCC
Confidence 777788875 7999999999999972211 3432 14788888887 799997765
No 93
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.37 E-value=0.00014 Score=40.78 Aligned_cols=46 Identities=30% Similarity=0.556 Sum_probs=34.8
Q ss_pred CceeCCCCCc---cCCCCCCCCCCCCC--CCCCCceeCCC---CceecCCCCcCCC
Q psy6687 32 GVCSCPPGFQ---GLHCEGGPGPGCDQ--KCSNGGWCDSQ---QMCQCPKGYQGTY 79 (116)
Q Consensus 32 ~~C~c~~g~~---g~~c~~~~~~~~~~--~c~~~g~c~~~---~~c~C~~g~~g~~ 79 (116)
+.|.|++||. |..|+ ++++|... +|.+ +.|++. ++|.|++||.+..
T Consensus 88 ~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred CcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 5778999995 88887 67777543 4875 588753 7899999998764
No 94
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.34 E-value=0.0033 Score=34.19 Aligned_cols=56 Identities=32% Similarity=0.636 Sum_probs=37.6
Q ss_pred CCCCCcEecC-----CC-ceeCCCCCccCCCCCCCCCCCCCCCCCCceeCCCCceecCCCCcCCCCCC
Q psy6687 21 QCLNNGTCTA-----PG-VCSCPPGFQGLHCEGGPGPGCDQKCSNGGWCDSQQMCQCPKGYQGTYCGT 82 (116)
Q Consensus 21 ~c~~~g~C~~-----~~-~C~c~~g~~g~~c~~~~~~~~~~~c~~~g~c~~~~~c~C~~g~~g~~c~~ 82 (116)
+|+++|+|.+ .+ .|.|+++|+|..|+.++. ..|..+ .- ..++..+...+.|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-~G-~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-NG-HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-SC-TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-cc-ccceeeccccccCCcccC
Confidence 5888999964 24 799999999999985542 133221 00 126677777778888874
No 95
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.30 E-value=0.0038 Score=33.90 Aligned_cols=41 Identities=24% Similarity=0.542 Sum_probs=23.6
Q ss_pred ccCCCCCcCCCCCCCCCCCCCCCC-cEecCCCceeCCCCCccCCCC
Q psy6687 2 CQCPKGYQGTYCGTAMCFPQCLNN-GTCTAPGVCSCPPGFQGLHCE 46 (116)
Q Consensus 2 C~C~~g~~g~~c~~~~c~~~c~~~-g~C~~~~~C~c~~g~~g~~c~ 46 (116)
|.|+++|+|..|+.+.. ..|... | ..|++.+...+.|..|+
T Consensus 21 C~Cp~g~~G~~Ce~~~~-~~C~~g~G---~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 21 CNCPKKFGGQHCEIDKS-KTCYEGNG---HFYRGKASTDTMGRPCL 62 (122)
T ss_dssp EECCTTEESTTSCEESS-CCSBCSSC---TTCCSCCCBBTTSCBBC
T ss_pred ccCCCCCCCccccccCc-CCCccccc---ccceeeccccccCCccc
Confidence 66777777777765321 123221 1 13666666667777775
No 96
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=96.22 E-value=0.0015 Score=32.67 Aligned_cols=28 Identities=32% Similarity=0.955 Sum_probs=19.7
Q ss_pred CCCCCCcEec-----CCCceeCCCCCcCCCCCCC
Q psy6687 87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~~ 115 (116)
..|.++ +|. ....|.|++||+|.+|+..
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred CcCCCC-EeeeecCCCCeEEEcCCCccccccccc
Confidence 456654 673 2367899999999998854
No 97
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=96.15 E-value=0.0043 Score=28.24 Aligned_cols=27 Identities=26% Similarity=0.812 Sum_probs=18.7
Q ss_pred CCCCCCcEec-----CCCceeCCCCCcCCCCCC
Q psy6687 87 PQCLNNGTCT-----APGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 87 ~~c~~~g~c~-----~~~~C~C~~g~~g~~C~~ 114 (116)
..|.+ |+|. +...|.|++||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 35655 4775 124688899999998875
No 98
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=96.13 E-value=0.00035 Score=39.40 Aligned_cols=30 Identities=40% Similarity=0.988 Sum_probs=24.7
Q ss_pred CCCCCCcEecC---CCceeCCCCCcCCCCCCCC
Q psy6687 87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGGT 116 (116)
Q Consensus 87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~~ 116 (116)
.+|.+++.|.+ .+.|.|.+||+|..||++|
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~~ 157 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 157 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCccccccC
Confidence 46777788863 4799999999999999765
No 99
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=95.88 E-value=0.0032 Score=35.31 Aligned_cols=51 Identities=31% Similarity=0.605 Sum_probs=33.5
Q ss_pred CCCCCceeCCC-----C-ceecCCCCcCCCCCCCCCCCCCCCCcEecC----CCceeCCCCCcCCCCC
Q psy6687 56 KCSNGGWCDSQ-----Q-MCQCPKGYQGTYCGTAMCFPQCLNNGTCTA----PGVCSCPPGFQGLHCE 113 (116)
Q Consensus 56 ~c~~~g~c~~~-----~-~c~C~~g~~g~~c~~~~c~~~c~~~g~c~~----~~~C~C~~g~~g~~C~ 113 (116)
+|.++|+|... + .|.|+++|.|.+|+++ .. ..|.. .|+........|..|+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~---~~----~~C~~g~G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID---KS----KTCYEGNGHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE---SS----CCEECTTCTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecc---cc----ccCCCCCccccccceecCCcCCccc
Confidence 78999999542 3 6999999999999865 12 23442 2444444455666664
No 100
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.75 E-value=0.0033 Score=35.65 Aligned_cols=29 Identities=28% Similarity=0.700 Sum_probs=23.0
Q ss_pred CCCCCCcEecC---CCceeCCCCCcCCCCCCC
Q psy6687 87 PQCLNNGTCTA---PGVCSCPPGFQGLHCEGG 115 (116)
Q Consensus 87 ~~c~~~g~c~~---~~~C~C~~g~~g~~C~~~ 115 (116)
.+|..+++|.. .+.|.|.+||.|..|+..
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 56777888873 378999999999999854
No 101
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.72 E-value=0.0033 Score=40.52 Aligned_cols=40 Identities=33% Similarity=0.859 Sum_probs=8.5
Q ss_pred CceecCCCCc----CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCc
Q psy6687 67 QMCQCPKGYQ----GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQ 108 (116)
Q Consensus 67 ~~c~C~~g~~----g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~ 108 (116)
+.|.|++||. |..|. +++|. .+|.+ .|.+ ++.|.|++||.
T Consensus 24 ~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 24 VQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp ----------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred cEeECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence 4555666655 45553 33443 34443 1442 25566666654
No 102
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.57 E-value=0.0079 Score=42.53 Aligned_cols=41 Identities=34% Similarity=0.799 Sum_probs=29.4
Q ss_pred CceecCCCCc---CCCCC-CCCCC--CCCCCCcEecC---CCceeCCCCCcC
Q psy6687 67 QMCQCPKGYQ---GTYCG-TAMCF--PQCLNNGTCTA---PGVCSCPPGFQG 109 (116)
Q Consensus 67 ~~c~C~~g~~---g~~c~-~~~c~--~~c~~~g~c~~---~~~C~C~~g~~g 109 (116)
+.|.|++||. |..|+ +++|. .+|. ..|.+ +|.|.|++||..
T Consensus 333 y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 333 YECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCCccCCCCccccCcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 6899999995 67775 56665 2343 35553 489999999964
No 103
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.55 E-value=0.039 Score=38.46 Aligned_cols=44 Identities=36% Similarity=0.727 Sum_probs=32.0
Q ss_pred CCceeCCCCCc---cCCCCCCCCCCC-CCCCCCCceeCC---CCceecCCCCcC
Q psy6687 31 PGVCSCPPGFQ---GLHCEGGPGPGC-DQKCSNGGWCDS---QQMCQCPKGYQG 77 (116)
Q Consensus 31 ~~~C~c~~g~~---g~~c~~~~~~~~-~~~c~~~g~c~~---~~~c~C~~g~~g 77 (116)
.|.|.|++||. |..|+ ++++|. ..+|. ..|.+ .+.|.|++||.+
T Consensus 314 ~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 314 GYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred CcEEeCCCCeEcCCCCccc-CccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence 58999999998 77787 666665 23453 24554 278999999975
No 104
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.39 E-value=0.0035 Score=35.44 Aligned_cols=33 Identities=30% Similarity=0.641 Sum_probs=25.9
Q ss_pred CCCCCCCCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687 51 PGCDQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 51 ~~~~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~~ 83 (116)
.+...+|.+++.|.+. ++|.|++||.|..|+..
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 3455678888888753 68999999999999853
No 105
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.02 E-value=0.011 Score=40.47 Aligned_cols=32 Identities=44% Similarity=1.008 Sum_probs=17.5
Q ss_pred CCCCCCCCCCceeCC----CCceecC-CCCcCCCCCC
Q psy6687 51 PGCDQKCSNGGWCDS----QQMCQCP-KGYQGTYCGT 82 (116)
Q Consensus 51 ~~~~~~c~~~g~c~~----~~~c~C~-~g~~g~~c~~ 82 (116)
+|...||.++|.|.. .+.|.|+ +||.|..|+.
T Consensus 3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 344455666666552 2456666 6666666653
No 106
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.72 E-value=0.0085 Score=40.72 Aligned_cols=30 Identities=33% Similarity=0.890 Sum_probs=15.7
Q ss_pred CCCCCCCCCceeCC-C---CceecC-CCCcCCCCC
Q psy6687 52 GCDQKCSNGGWCDS-Q---QMCQCP-KGYQGTYCG 81 (116)
Q Consensus 52 ~~~~~c~~~g~c~~-~---~~c~C~-~g~~g~~c~ 81 (116)
|...||.++|.|.. . +.|.|+ +||.|..|+
T Consensus 5 C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 5 CCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp GGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 34445555555543 1 455555 555555555
No 107
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=93.97 E-value=0.061 Score=38.16 Aligned_cols=48 Identities=38% Similarity=0.785 Sum_probs=32.9
Q ss_pred EecC---CCceeCCCCCc---cCCCCCCCCCCCC-CCCCCCceeCC---CCceecCCCCcC
Q psy6687 27 TCTA---PGVCSCPPGFQ---GLHCEGGPGPGCD-QKCSNGGWCDS---QQMCQCPKGYQG 77 (116)
Q Consensus 27 ~C~~---~~~C~c~~g~~---g~~c~~~~~~~~~-~~c~~~g~c~~---~~~c~C~~g~~g 77 (116)
.|.+ .|.|.|++||. |..|+ ++++|.. .+|. ..|.+ .+.|.|.+||..
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 5654 57899999995 77776 5666642 2343 24554 278999999964
No 108
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.53 E-value=0.038 Score=37.90 Aligned_cols=28 Identities=36% Similarity=0.909 Sum_probs=24.1
Q ss_pred CCCCCCcEecC----CCceeCC-CCCccCCCCC
Q psy6687 20 PQCLNNGTCTA----PGVCSCP-PGFQGLHCEG 47 (116)
Q Consensus 20 ~~c~~~g~C~~----~~~C~c~-~g~~g~~c~~ 47 (116)
.+|.++|+|.+ .|.|.|+ +||+|..|+.
T Consensus 7 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 7 NPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 36999999983 5789999 9999999984
No 109
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.11 E-value=0.026 Score=31.87 Aligned_cols=32 Identities=31% Similarity=0.639 Sum_probs=22.8
Q ss_pred CCCCCCceeCC---CCceecCCCCcCCCCCC-CCCC
Q psy6687 55 QKCSNGGWCDS---QQMCQCPKGYQGTYCGT-AMCF 86 (116)
Q Consensus 55 ~~c~~~g~c~~---~~~c~C~~g~~g~~c~~-~~c~ 86 (116)
.+|..+|.|.. .+.|.|.+||.|..|+. ..|+
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~~c~ 160 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQVDP 160 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC----
T ss_pred CcCCCCCeecccCCCceeeeCCCcccccccccccCc
Confidence 56778888874 26899999999999984 3443
No 110
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=92.83 E-value=0.011 Score=33.20 Aligned_cols=30 Identities=30% Similarity=0.800 Sum_probs=23.3
Q ss_pred CCCCCCCceeCCC---CceecCCCCcCCCCCCC
Q psy6687 54 DQKCSNGGWCDSQ---QMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 54 ~~~c~~~g~c~~~---~~c~C~~g~~g~~c~~~ 83 (116)
..+|.+++.|... +.|.|.++|.|++|++.
T Consensus 124 ~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 124 NTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 3567777888653 68999999999999853
No 111
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.17 E-value=0.047 Score=37.16 Aligned_cols=28 Identities=29% Similarity=0.797 Sum_probs=24.3
Q ss_pred CCCCCCcEecC----CCceeCC-CCCccCCCCC
Q psy6687 20 PQCLNNGTCTA----PGVCSCP-PGFQGLHCEG 47 (116)
Q Consensus 20 ~~c~~~g~C~~----~~~C~c~-~g~~g~~c~~ 47 (116)
.+|.++|+|.+ .|.|.|+ +||+|..|+.
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 36999999976 4799999 9999999984
No 112
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.55 E-value=0.12 Score=28.97 Aligned_cols=29 Identities=48% Similarity=1.047 Sum_probs=23.7
Q ss_pred CCCCCcEecC-----CC-ceeCCCCCccCCCCCCC
Q psy6687 21 QCLNNGTCTA-----PG-VCSCPPGFQGLHCEGGP 49 (116)
Q Consensus 21 ~c~~~g~C~~-----~~-~C~c~~g~~g~~c~~~~ 49 (116)
+|+++|+|+. .+ .|.|+++|.|..|+.+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence 6999999964 23 79999999999998544
No 113
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=91.20 E-value=0.12 Score=34.96 Aligned_cols=27 Identities=30% Similarity=0.754 Sum_probs=24.0
Q ss_pred CCCCCcEecCCCceeCCCCCcCCCCCC
Q psy6687 88 QCLNNGTCTAPGVCSCPPGFQGLHCEG 114 (116)
Q Consensus 88 ~c~~~g~c~~~~~C~C~~g~~g~~C~~ 114 (116)
.|..+|.|.+...|.|.+||.+++|+.
T Consensus 455 ~C~~~GVCNn~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 455 ICSGNGVCSNELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp SGGGTEEEBTTSCEEECTTEESTTSCE
T ss_pred ccCCCCeeCCCCCcCCCCCCCCCCCCC
Confidence 588899999878999999999999974
No 114
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=89.78 E-value=0.22 Score=32.44 Aligned_cols=31 Identities=32% Similarity=0.801 Sum_probs=24.7
Q ss_pred CCC-CCCCCCcEecC---CCceeCCC-CCcCCCCCC
Q psy6687 84 MCF-PQCLNNGTCTA---PGVCSCPP-GFQGLHCEG 114 (116)
Q Consensus 84 ~c~-~~c~~~g~c~~---~~~C~C~~-g~~g~~C~~ 114 (116)
.|. .+|.++|+|.. .+.|.|+. +|.|+.|+.
T Consensus 187 ~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 187 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 344 68999999984 47899995 999999974
No 115
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=89.73 E-value=0.24 Score=36.92 Aligned_cols=32 Identities=31% Similarity=0.785 Sum_probs=24.1
Q ss_pred CCC-CCCCCCcEecC---CCceeCC-CCCcCCCCCCC
Q psy6687 84 MCF-PQCLNNGTCTA---PGVCSCP-PGFQGLHCEGG 115 (116)
Q Consensus 84 ~c~-~~c~~~g~c~~---~~~C~C~-~g~~g~~C~~~ 115 (116)
.|. .+|.++|+|.. .+.|.|+ ++|.|+.|+.+
T Consensus 1019 ~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred ceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 344 57888888873 3789998 59999998753
No 116
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=89.68 E-value=0.21 Score=32.45 Aligned_cols=38 Identities=34% Similarity=0.815 Sum_probs=28.4
Q ss_pred CCCCCCCCCCCCCCCCceeCCC---CceecCC-CCcCCCCCC
Q psy6687 45 CEGGPGPGCDQKCSNGGWCDSQ---QMCQCPK-GYQGTYCGT 82 (116)
Q Consensus 45 c~~~~~~~~~~~c~~~g~c~~~---~~c~C~~-g~~g~~c~~ 82 (116)
|....+.|...+|.++|.|... +.|.|+. +|.|+.|+.
T Consensus 181 C~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 181 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 4433456667789999999753 6899985 899999974
No 117
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=88.96 E-value=0.11 Score=33.76 Aligned_cols=16 Identities=31% Similarity=0.806 Sum_probs=12.7
Q ss_pred CceeCCCCCccCCCCC
Q psy6687 32 GVCSCPPGFQGLHCEG 47 (116)
Q Consensus 32 ~~C~c~~g~~g~~c~~ 47 (116)
+.|.|..+|.|..|+.
T Consensus 272 ~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 272 LMCNCKHNTYGVDCEK 287 (375)
T ss_dssp EEECCCTTEESTTSCE
T ss_pred eeeeCcCCCcCCCccc
Confidence 4678888999988873
No 118
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=86.80 E-value=1 Score=29.58 Aligned_cols=14 Identities=29% Similarity=0.793 Sum_probs=9.7
Q ss_pred ceeCCCCCccCCCC
Q psy6687 33 VCSCPPGFQGLHCE 46 (116)
Q Consensus 33 ~C~c~~g~~g~~c~ 46 (116)
.|.|..++.|..|+
T Consensus 287 ~C~C~hnT~G~~CE 300 (403)
T 2y38_A 287 QCACQHNTCGGSCD 300 (403)
T ss_dssp EECCCTTEESSSCC
T ss_pred EeECcCcCcCCCCC
Confidence 46777777777776
No 119
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=85.76 E-value=0.1 Score=33.91 Aligned_cols=27 Identities=33% Similarity=0.901 Sum_probs=23.4
Q ss_pred CCCCCCCCCcEecCCCceeCCCCCcCCC
Q psy6687 84 MCFPQCLNNGTCTAPGVCSCPPGFQGLH 111 (116)
Q Consensus 84 ~c~~~c~~~g~c~~~~~C~C~~g~~g~~ 111 (116)
.|++.|.++|.|.. +.|.|.+||.|..
T Consensus 193 ~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 193 PCPSYCSGHGDCIS-GVCFCDLGYTAAQ 219 (387)
T ss_dssp CCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred cCccccCCCceecC-CeEEecCCcccCC
Confidence 47778999999986 8999999999874
No 120
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=84.73 E-value=0.56 Score=35.06 Aligned_cols=39 Identities=33% Similarity=0.809 Sum_probs=28.7
Q ss_pred CCCCCCCCCCCCCCCCceeCCC---CceecC-CCCcCCCCCCC
Q psy6687 45 CEGGPGPGCDQKCSNGGWCDSQ---QMCQCP-KGYQGTYCGTA 83 (116)
Q Consensus 45 c~~~~~~~~~~~c~~~g~c~~~---~~c~C~-~g~~g~~c~~~ 83 (116)
|....+.|...+|.++|.|... +.|.|+ ++|.|+.|+..
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 4433456667789999999642 689999 59999999753
No 121
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=81.44 E-value=0.33 Score=31.57 Aligned_cols=27 Identities=33% Similarity=0.901 Sum_probs=23.2
Q ss_pred CCCCCCCCCcEecCCCceeCCCCCccCC
Q psy6687 17 MCFPQCLNNGTCTAPGVCSCPPGFQGLH 44 (116)
Q Consensus 17 ~c~~~c~~~g~C~~~~~C~c~~g~~g~~ 44 (116)
.|...|.++|.|.. +.|.|..||.|..
T Consensus 193 ~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 193 PCPSYCSGHGDCIS-GVCFCDLGYTAAQ 219 (387)
T ss_dssp CCGGGGGGSEEEET-TEEEECTTEEEET
T ss_pred cCccccCCCceecC-CeEEecCCcccCC
Confidence 36667999999986 8999999999975
No 122
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=81.00 E-value=1 Score=30.49 Aligned_cols=29 Identities=31% Similarity=0.800 Sum_probs=25.3
Q ss_pred CCCCCCceeCCCCceecCCCCcCCCCCCC
Q psy6687 55 QKCSNGGWCDSQQMCQCPKGYQGTYCGTA 83 (116)
Q Consensus 55 ~~c~~~g~c~~~~~c~C~~g~~g~~c~~~ 83 (116)
..|..+|+|.+...|.|.+||..+.|+..
T Consensus 454 ~~C~~~GVCNn~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 454 TICSGNGVCSNELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CSGGGTEEEBTTSCEEECTTEESTTSCEE
T ss_pred cccCCCCeeCCCCCcCCCCCCCCCCCCCC
Confidence 35889999988789999999999999853
No 123
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=80.54 E-value=0.21 Score=31.12 Aligned_cols=21 Identities=24% Similarity=0.675 Sum_probs=11.3
Q ss_pred CCCCCcEecC---CCceeCCCCCc
Q psy6687 88 QCLNNGTCTA---PGVCSCPPGFQ 108 (116)
Q Consensus 88 ~c~~~g~c~~---~~~C~C~~g~~ 108 (116)
.|..++.|.+ +|.|.|.+||.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~ 37 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYT 37 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEE
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCC
Confidence 4555555553 25666666665
No 124
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=79.61 E-value=0.84 Score=20.28 Aligned_cols=10 Identities=50% Similarity=1.378 Sum_probs=4.5
Q ss_pred CceeCCCCCc
Q psy6687 99 GVCSCPPGFQ 108 (116)
Q Consensus 99 ~~C~C~~g~~ 108 (116)
|.|.|++||+
T Consensus 33 y~C~C~~Gy~ 42 (53)
T 1apq_A 33 YFCSCRPGYE 42 (53)
T ss_dssp EEEECSTTCE
T ss_pred eEEECCCCCe
Confidence 3444444443
No 125
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=77.69 E-value=1.1 Score=30.15 Aligned_cols=25 Identities=52% Similarity=1.213 Sum_probs=14.4
Q ss_pred CCC-CCcEecCCCceeCCCCCcCCCCC
Q psy6687 88 QCL-NNGTCTAPGVCSCPPGFQGLHCE 113 (116)
Q Consensus 88 ~c~-~~g~c~~~~~C~C~~g~~g~~C~ 113 (116)
.|. .+|+..- +.|.|.+||.|..||
T Consensus 447 ~C~~g~G~~~C-G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFEC-GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEET-TEEEECTTC------
T ss_pred ccCCCCeeEeC-CceECcCCCCCCCCC
Confidence 465 5666554 789999999999986
No 126
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=76.75 E-value=0.88 Score=21.99 Aligned_cols=30 Identities=10% Similarity=0.178 Sum_probs=17.9
Q ss_pred CCCCCCC--CCCCCCceeCCC---Cceec-CCCCcC
Q psy6687 48 GPGPGCD--QKCSNGGWCDSQ---QMCQC-PKGYQG 77 (116)
Q Consensus 48 ~~~~~~~--~~c~~~g~c~~~---~~c~C-~~g~~g 77 (116)
++++|.. .+|..++.|++. ++|.+ ..+|.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 3455543 357777788753 67764 456653
No 127
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=64.39 E-value=2.8 Score=28.15 Aligned_cols=25 Identities=28% Similarity=0.934 Sum_probs=14.4
Q ss_pred CCC-CCceeCCCCceecCCCCcCCCCC
Q psy6687 56 KCS-NGGWCDSQQMCQCPKGYQGTYCG 81 (116)
Q Consensus 56 ~c~-~~g~c~~~~~c~C~~g~~g~~c~ 81 (116)
.|+ .+|...- +.|.|.+||.|..|+
T Consensus 447 ~C~~g~G~~~C-G~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFEC-GVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEET-TEEEECTTC------
T ss_pred ccCCCCeeEeC-CceECcCCCCCCCCC
Confidence 465 5676555 789999999999885
No 128
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=63.22 E-value=1.5 Score=29.65 Aligned_cols=24 Identities=50% Similarity=1.086 Sum_probs=0.0
Q ss_pred CC-CCcEecCCCceeCCCCCcCCCCC
Q psy6687 89 CL-NNGTCTAPGVCSCPPGFQGLHCE 113 (116)
Q Consensus 89 c~-~~g~c~~~~~C~C~~g~~g~~C~ 113 (116)
|. .+|+..- +.|.|.+||.|..|+
T Consensus 469 C~~g~G~~~C-G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 469 CSDGQGHLQC-GVCSCAPGRLGRLCE 493 (503)
T ss_dssp --------------------------
T ss_pred cCCCCeeEeC-CceECcCCCcCCCCC
Confidence 53 4444333 689999999999997
No 129
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=51.82 E-value=19 Score=18.69 Aligned_cols=10 Identities=20% Similarity=0.411 Sum_probs=6.8
Q ss_pred CceeCCCCCc
Q psy6687 99 GVCSCPPGFQ 108 (116)
Q Consensus 99 ~~C~C~~g~~ 108 (116)
..|.|.++|.
T Consensus 74 i~C~C~~g~~ 83 (99)
T 1ob1_C 74 ITCECTKPDS 83 (99)
T ss_dssp CEEEECSTTC
T ss_pred eEeEeCCCCc
Confidence 4677877753
No 130
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=45.42 E-value=9.1 Score=17.55 Aligned_cols=11 Identities=45% Similarity=1.135 Sum_probs=8.8
Q ss_pred CCceeCCCCCc
Q psy6687 31 PGVCSCPPGFQ 41 (116)
Q Consensus 31 ~~~C~c~~g~~ 41 (116)
.+.|.|++||.
T Consensus 20 s~~C~C~~Gy~ 30 (59)
T 2wph_E 20 KVVCSCTEGYR 30 (59)
T ss_dssp CEEEECCTTEE
T ss_pred CEEeeCCCCcE
Confidence 46799999985
No 131
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=43.56 E-value=2.3 Score=24.02 Aligned_cols=10 Identities=40% Similarity=0.949 Sum_probs=7.3
Q ss_pred CceeCCCCCc
Q psy6687 99 GVCSCPPGFQ 108 (116)
Q Consensus 99 ~~C~C~~g~~ 108 (116)
+.|.|++||.
T Consensus 148 ~~C~C~~Gy~ 157 (170)
T 1szb_A 148 FYCSCRAGYV 157 (170)
T ss_dssp EEEECCTTEE
T ss_pred EEEeCCCCcE
Confidence 5777777775
No 132
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=42.87 E-value=3.3 Score=15.88 Aligned_cols=16 Identities=38% Similarity=1.126 Sum_probs=9.2
Q ss_pred CCCCCcEecCCCceeCC
Q psy6687 88 QCLNNGTCTAPGVCSCP 104 (116)
Q Consensus 88 ~c~~~g~c~~~~~C~C~ 104 (116)
+|..+|.|.+ +.|.|-
T Consensus 8 ~C~~~gKCmN-gkC~Cy 23 (26)
T 1jlz_A 8 KCKGSGKCIN-GRCKCY 23 (26)
T ss_dssp HTTSSEEEET-TEEEEC
T ss_pred hhCCCCEEeC-CCceee
Confidence 4455566765 566663
No 133
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=39.77 E-value=35 Score=17.94 Aligned_cols=19 Identities=26% Similarity=0.613 Sum_probs=9.4
Q ss_pred CCCCcEecC----CCceeCCCCC
Q psy6687 89 CLNNGTCTA----PGVCSCPPGF 107 (116)
Q Consensus 89 c~~~g~c~~----~~~C~C~~g~ 107 (116)
|..++.|.. .-.|.|.++|
T Consensus 61 Cd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 61 CAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp SCTTSEEEECTTSCEEEECCSTT
T ss_pred cCCCcEeEECCCCEEEeECCCCC
Confidence 444455542 1356666654
No 134
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=37.72 E-value=7.2 Score=17.49 Aligned_cols=11 Identities=45% Similarity=1.114 Sum_probs=9.2
Q ss_pred CCceeCCCCCc
Q psy6687 98 PGVCSCPPGFQ 108 (116)
Q Consensus 98 ~~~C~C~~g~~ 108 (116)
++.|.|++||.
T Consensus 21 sy~C~C~~Gy~ 31 (55)
T 2jkh_L 21 SVVCSCARGYT 31 (55)
T ss_dssp EEEEECCTTEE
T ss_pred CeEEeCCCCCE
Confidence 37899999985
No 135
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=36.56 E-value=24 Score=13.99 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=5.5
Q ss_pred CcEecCCCceeC
Q psy6687 92 NGTCTAPGVCSC 103 (116)
Q Consensus 92 ~g~c~~~~~C~C 103 (116)
+|.|.+ +.|.|
T Consensus 19 ~gKC~N-gkC~C 29 (31)
T 1cmr_A 19 KGWCDH-RGCIC 29 (31)
T ss_dssp CCCEET-TEECC
T ss_pred CCceeC-CCcee
Confidence 345554 45554
No 136
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=32.92 E-value=16 Score=24.99 Aligned_cols=20 Identities=30% Similarity=0.664 Sum_probs=13.2
Q ss_pred CCCCceeCC-CCceecCCCCc
Q psy6687 57 CSNGGWCDS-QQMCQCPKGYQ 76 (116)
Q Consensus 57 c~~~g~c~~-~~~c~C~~g~~ 76 (116)
|...|.+.. .+.|.|.+||.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e 272 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYE 272 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEE
T ss_pred EcCCCCEecccCcEeccCccc
Confidence 555554432 37899999986
No 137
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=32.31 E-value=9.9 Score=16.93 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=8.5
Q ss_pred CceeCCCCCc
Q psy6687 99 GVCSCPPGFQ 108 (116)
Q Consensus 99 ~~C~C~~g~~ 108 (116)
+.|.|++||.
T Consensus 21 ~~C~C~~Gy~ 30 (53)
T 2bz6_L 21 RSCRCHEGYS 30 (53)
T ss_dssp EEEECCTTEE
T ss_pred EEeeCCCCCE
Confidence 6799999985
No 138
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=29.66 E-value=9.1 Score=16.88 Aligned_cols=11 Identities=36% Similarity=0.872 Sum_probs=8.8
Q ss_pred CCceeCCCCCc
Q psy6687 98 PGVCSCPPGFQ 108 (116)
Q Consensus 98 ~~~C~C~~g~~ 108 (116)
+++|.|++||.
T Consensus 18 s~~C~C~~Gy~ 28 (51)
T 1kig_L 18 EVRCSCAHGYV 28 (51)
T ss_dssp EECCCCCTTEE
T ss_pred CeEEeCCCCcE
Confidence 37899999985
No 139
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=28.46 E-value=19 Score=23.92 Aligned_cols=16 Identities=44% Similarity=0.933 Sum_probs=12.5
Q ss_pred CceeCCCCCcCCCCCC
Q psy6687 99 GVCSCPPGFQGLHCEG 114 (116)
Q Consensus 99 ~~C~C~~g~~g~~C~~ 114 (116)
+.|.|-.||.|..|+.
T Consensus 397 F~C~Cy~gw~G~~C~~ 412 (424)
T 2pe4_A 397 FKCRCYPGWQAPWCER 412 (424)
T ss_dssp EEEEECTTBCTTTTCS
T ss_pred cEeeccCCCCcccccC
Confidence 6788888888888864
No 140
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=28.01 E-value=6.6 Score=15.70 Aligned_cols=16 Identities=38% Similarity=1.130 Sum_probs=8.5
Q ss_pred CCCCCCcEecCCCceeC
Q psy6687 87 PQCLNNGTCTAPGVCSC 103 (116)
Q Consensus 87 ~~c~~~g~c~~~~~C~C 103 (116)
.+|..+|.|.+ +.|.|
T Consensus 15 ~~C~~~gKC~N-gkC~C 30 (31)
T 1pvz_A 15 RKCPGNPPCRN-GFCAC 30 (31)
T ss_dssp HHSSSCCCEET-TEESC
T ss_pred hhhccCCcccC-CCcee
Confidence 34555566665 45554
No 141
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=27.51 E-value=23 Score=24.46 Aligned_cols=22 Identities=27% Similarity=0.904 Sum_probs=12.9
Q ss_pred CCCCCcEecC----CCceeCCCCCcC
Q psy6687 88 QCLNNGTCTA----PGVCSCPPGFQG 109 (116)
Q Consensus 88 ~c~~~g~c~~----~~~C~C~~g~~g 109 (116)
+|..++.|+. .+.|.|+.||.|
T Consensus 28 ~c~~~a~C~~~~~~~~~c~C~~G~ag 53 (551)
T 3fby_A 28 ECHEHADCVLERDGSRSCVCAVGWAG 53 (551)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEES
T ss_pred CCCCCCeeEeCCCCCEecCCCCCCCC
Confidence 5555555542 246777777755
No 142
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=24.28 E-value=17 Score=17.29 Aligned_cols=11 Identities=27% Similarity=0.924 Sum_probs=8.8
Q ss_pred CCceeCCCCCc
Q psy6687 98 PGVCSCPPGFQ 108 (116)
Q Consensus 98 ~~~C~C~~g~~ 108 (116)
++.|.|++||.
T Consensus 26 s~~C~C~~Gy~ 36 (69)
T 1kli_L 26 KRSCRCHEGYS 36 (69)
T ss_dssp EEEEECCTTEE
T ss_pred CEEEeCCCCCe
Confidence 36799999985
Done!