Query psy669
Match_columns 248
No_of_seqs 268 out of 1705
Neff 9.3
Searched_HMMs 29240
Date Sat Aug 17 00:33:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy669.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/669hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2w_A Cadherin-2; cell adhesi 100.0 4E-46 1.4E-50 339.2 28.3 242 1-245 59-359 (559)
2 1l3w_A EP-cadherin, C-cadherin 100.0 1.6E-46 5.4E-51 340.9 25.5 233 1-236 65-341 (546)
3 3q2v_A Cadherin-1; cell adhesi 100.0 3.2E-46 1.1E-50 339.3 27.1 235 1-238 59-337 (550)
4 3ubf_A Neural-cadherin; cell a 100.0 1.2E-45 4E-50 314.2 24.4 222 1-230 51-316 (316)
5 1q55_A EP-cadherin, C-cadherin 100.0 3.3E-45 1.1E-49 347.1 25.5 233 1-236 214-490 (880)
6 2a62_A Cadherin-8; extracellul 100.0 7.7E-45 2.6E-49 309.4 21.0 205 1-211 56-266 (322)
7 3q2v_A Cadherin-1; cell adhesi 100.0 6.2E-44 2.1E-48 324.3 28.0 227 2-235 172-443 (550)
8 3ubh_A Neural-cadherin; cell a 100.0 4.2E-44 1.4E-48 315.5 25.3 230 2-238 57-329 (419)
9 3q2w_A Cadherin-2; cell adhesi 100.0 1.2E-43 4.1E-48 322.9 25.2 230 2-237 171-450 (559)
10 1l3w_A EP-cadherin, C-cadherin 100.0 3.3E-44 1.1E-48 325.7 18.8 227 2-235 178-448 (546)
11 1q55_A EP-cadherin, C-cadherin 100.0 1.2E-42 4E-47 329.7 18.8 226 2-234 327-596 (880)
12 3ubh_A Neural-cadherin; cell a 100.0 6.9E-39 2.3E-43 282.3 25.6 215 2-225 168-418 (419)
13 2a4e_A Cadherin-11; dimer, cal 100.0 3.5E-36 1.2E-40 242.1 19.5 153 1-156 57-215 (215)
14 3mvs_A Cadherin-23, otocadheri 100.0 1.5E-36 5.1E-41 243.7 16.3 177 45-230 3-210 (210)
15 2a4e_A Cadherin-11; dimer, cal 100.0 1.2E-35 4E-40 239.0 19.9 176 54-232 5-215 (215)
16 2x2u_A Proto-oncogene tyrosine 100.0 9.3E-38 3.2E-42 256.3 5.7 183 49-234 2-245 (246)
17 2x2u_A Proto-oncogene tyrosine 100.0 3.7E-37 1.3E-41 252.7 7.6 155 1-158 66-245 (246)
18 3mvs_A Cadherin-23, otocadheri 100.0 1.3E-33 4.5E-38 226.6 20.2 146 2-154 64-210 (210)
19 3qrb_A Cadherin-1; cell adhesi 100.0 1.3E-33 4.5E-38 227.1 17.8 147 1-149 59-213 (213)
20 3ppe_A Vascular endothelial ca 100.0 8.2E-33 2.8E-37 220.7 19.8 144 1-149 54-203 (203)
21 2qvi_A Cadherin-2; beta barrel 100.0 2.7E-33 9.4E-38 225.3 17.0 147 2-149 60-215 (215)
22 3k5r_A Cadherin 13; mouse, str 100.0 3.1E-33 1.1E-37 225.6 17.2 147 1-149 59-218 (218)
23 2a62_A Cadherin-8; extracellul 100.0 6E-34 2E-38 242.3 11.9 188 55-245 5-236 (322)
24 2qvi_A Cadherin-2; beta barrel 100.0 1.6E-31 5.4E-36 215.0 19.3 128 56-186 6-137 (215)
25 3lnd_A CDH6 protein, cadherin 100.0 2.1E-32 7.1E-37 219.1 13.8 146 1-149 56-207 (207)
26 3ppe_A Vascular endothelial ca 100.0 9E-31 3.1E-35 208.9 19.9 165 55-225 5-203 (203)
27 3qrb_A Cadherin-1; cell adhesi 100.0 7.9E-31 2.7E-35 210.9 19.3 127 55-186 5-137 (213)
28 3lnd_A CDH6 protein, cadherin 100.0 9.5E-32 3.2E-36 215.3 12.1 166 56-225 6-207 (207)
29 2yst_A Protocadherin-7; BH-PCD 100.0 1.7E-31 5.8E-36 195.4 9.1 116 38-155 2-119 (119)
30 3k5r_A Cadherin 13; mouse, str 100.0 2.6E-30 8.9E-35 208.5 14.6 139 56-201 7-151 (218)
31 3ubf_A Neural-cadherin; cell a 100.0 9.2E-30 3.2E-34 216.3 18.5 145 2-154 163-316 (316)
32 2ee0_A Protocadherin-9; Ca dom 100.0 9.4E-29 3.2E-33 179.3 8.4 110 38-151 2-114 (114)
33 4apx_B Protocadherin-15, otoca 99.9 3.7E-27 1.3E-31 192.4 15.0 144 5-149 80-237 (242)
34 4apx_B Protocadherin-15, otoca 99.9 1.7E-24 6E-29 176.6 17.2 170 53-224 20-236 (242)
35 2yqg_A Desmoglein-2, HDGC; cad 99.9 9.1E-26 3.1E-30 165.6 4.9 115 43-160 5-123 (123)
36 1ncg_A N-cadherin; cell adhesi 99.9 4.9E-23 1.7E-27 148.1 8.9 99 54-157 6-110 (110)
37 1wyj_A Protocadherin beta 14; 99.8 1.8E-22 6E-27 148.2 2.5 107 52-165 10-123 (125)
38 1zvn_A Mn-cadherin; strand dim 99.8 8.1E-20 2.8E-24 128.4 11.1 91 55-149 6-99 (99)
39 1zxk_A Cadherin-8; strand dime 99.8 8.7E-20 3E-24 128.1 10.5 91 55-149 5-98 (98)
40 3k6d_A T-cadherin; cell adhesi 99.8 6.4E-19 2.2E-23 124.0 9.2 89 55-149 5-99 (99)
41 2yst_A Protocadherin-7; BH-PCD 99.8 3E-19 1E-23 130.1 6.7 85 145-231 2-119 (119)
42 3k6i_A T-cadherin; cell adhesi 99.8 3.1E-18 1E-22 120.6 11.2 88 56-149 6-99 (99)
43 3k6f_A T-cadherin; cell adhesi 99.8 2.1E-18 7.3E-23 121.6 10.2 88 56-149 7-100 (100)
44 2omz_B Epithelial-cadherin; le 99.8 3.2E-18 1.1E-22 121.7 9.1 90 56-150 10-105 (105)
45 2ee0_A Protocadherin-9; Ca dom 99.7 8.5E-17 2.9E-21 116.1 6.2 79 145-227 2-114 (114)
46 1wuz_A Pcdha4 protein, CNR-EC1 99.6 1.2E-16 4E-21 113.2 2.8 95 53-153 3-103 (103)
47 2yqg_A Desmoglein-2, HDGC; cad 99.4 3.1E-13 1.1E-17 98.6 5.5 53 1-53 71-123 (123)
48 1ncg_A N-cadherin; cell adhesi 99.4 3.4E-13 1.2E-17 96.5 4.9 50 1-50 61-110 (110)
49 1wyj_A Protocadherin beta 14; 99.2 1.4E-12 4.7E-17 95.3 0.7 76 160-241 11-123 (125)
50 2omz_B Epithelial-cadherin; le 98.8 5.4E-09 1.9E-13 73.8 5.4 43 1-43 63-105 (105)
51 3k6f_A T-cadherin; cell adhesi 98.7 1.6E-08 5.5E-13 70.6 5.6 42 1-42 59-100 (100)
52 1zvn_A Mn-cadherin; strand dim 98.7 1.9E-08 6.6E-13 70.1 5.8 42 1-42 57-99 (99)
53 3k6i_A T-cadherin; cell adhesi 98.7 2.1E-08 7.1E-13 70.0 5.9 42 1-42 58-99 (99)
54 3k6d_A T-cadherin; cell adhesi 98.7 2.2E-08 7.5E-13 69.8 5.6 42 1-42 58-99 (99)
55 1zxk_A Cadherin-8; strand dime 98.7 2.6E-08 8.9E-13 69.3 5.4 42 1-42 56-98 (98)
56 1wuz_A Pcdha4 protein, CNR-EC1 98.4 1.2E-07 4E-12 66.6 2.2 62 160-229 3-103 (103)
57 2yhg_A SDE_182CT, cellulose-bi 92.6 0.77 2.6E-05 39.8 9.6 67 75-147 365-436 (437)
58 1op4_A Neural-cadherin; beta s 91.7 1.5 5.1E-05 32.5 9.0 80 45-132 31-110 (159)
59 3rb5_A Na/Ca exchange protein; 87.9 10 0.00034 31.1 14.8 129 44-182 6-148 (298)
60 3pdd_A Glycoside hydrolase, fa 85.2 10 0.00036 28.7 16.4 117 13-149 60-180 (190)
61 2yrl_A KIAA1837 protein; PKD d 81.5 4.5 0.00015 27.3 6.1 31 12-44 67-97 (102)
62 2yrl_A KIAA1837 protein; PKD d 79.6 4.1 0.00014 27.5 5.4 32 118-152 67-98 (102)
63 3rb5_A Na/Ca exchange protein; 79.5 24 0.00082 28.8 12.1 78 10-92 87-164 (298)
64 2kpn_A Bacillolysin; solution 75.9 11 0.00039 25.5 6.7 43 2-46 47-89 (103)
65 2kpn_A Bacillolysin; solution 74.5 7.1 0.00024 26.6 5.4 42 111-155 50-91 (103)
66 3ead_A Na/Ca exchange protein; 72.2 23 0.0008 25.1 8.7 46 45-93 2-47 (137)
67 2y72_A Collagenase, collagenas 67.7 12 0.00041 24.1 5.2 31 115-148 54-84 (85)
68 2y72_A Collagenase, collagenas 66.4 16 0.00054 23.5 5.6 30 10-41 55-84 (85)
69 1u2c_A Dystroglycan; IG-like d 48.5 74 0.0025 25.1 7.4 64 85-152 33-104 (246)
70 3pdd_A Glycoside hydrolase, fa 44.7 96 0.0033 23.2 10.9 59 118-186 59-122 (190)
71 3gin_A Sodium/calcium exchange 37.4 1.2E+02 0.004 22.1 7.5 59 33-94 9-67 (160)
72 3klq_A Putative pilus anchorin 36.9 1.1E+02 0.0039 21.8 9.6 8 121-128 25-32 (141)
73 3us9_A Sodium/calcium exchange 33.6 1.9E+02 0.0065 23.4 13.8 125 10-145 88-229 (295)
74 3ott_A Two-component system se 32.6 1.3E+02 0.0043 27.5 7.7 78 70-159 676-753 (758)
75 3p4l_A Neogenin; iron homeosta 26.9 1.8E+02 0.0062 21.1 7.1 25 117-141 174-198 (211)
No 1
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=4e-46 Score=339.22 Aligned_cols=242 Identities=25% Similarity=0.328 Sum_probs=213.2
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
+|++.++||||+...|.|+|+|.|++++++++++.|.|+|.|+|||+|.|....|.++|+|++++|+.|+++.|+|+|.+
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g 138 (559)
T 3q2w_A 59 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDP 138 (559)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCT
T ss_pred EEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCC
Confidence 37889999999999999999999999988999999999999999999999999999999999999999999999999987
Q ss_pred --CCceEEEEEecCCCC----CcEEEeCCCeEEEEecC-CCCccccceeEEEEEEEeCCC-C-CCCceEEEEEEEEEecC
Q psy669 81 --PDQRISYKISAGNPE----SYFNIDIGSGLISTTGR-KLDRENQAEHVLEVTVTDDGA-P-APLSSTTRVIISVEDVN 151 (248)
Q Consensus 81 --~~~~i~y~i~~~~~~----~~F~id~~tg~i~~~~~-~ld~e~~~~~~l~v~a~d~~~-p-~~~~~~~~v~I~V~d~N 151 (248)
.|+.++|+|.++.+. ++|.|++.+|.| .+.+ .||||....|.|.|.|+|++. | .+++++++|+|+|.|+|
T Consensus 139 ~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvN 217 (559)
T 3q2w_A 139 NALNGMLRYRILSQAPSTPSPNMFTINNETGDI-ITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVN 217 (559)
T ss_dssp TSGGGCCEEEEEEEESCCSCTTCEEECTTTCEE-EECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCS
T ss_pred CCCceEEEEEEecCCCCCCCcceEEEeCCceEE-EEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCC
Confidence 589999999876543 689999999999 5555 999999999999999999753 2 15899999999999999
Q ss_pred CCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC-------------------------------------CCCCccCc
Q psy669 152 DNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG-------------------------------------RKLDRENQ 194 (248)
Q Consensus 152 d~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~-------------------------------------~~ld~e~~ 194 (248)
||+|+|....|.+.|+|++ +|+.|+++.|+|+|. ++||||..
T Consensus 218 Dn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~ 296 (559)
T 3q2w_A 218 DNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETN 296 (559)
T ss_dssp CSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTC
T ss_pred CCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccC
Confidence 9999999999999999996 899999999999983 56999999
Q ss_pred eEEEEEEccCCCCce----eecCCceEEEEEEEEeeeCCcccccC---------CCCcccEEEE
Q psy669 195 AEHVLETGSGESEAT----LETGSGESEATLEVLFENSTWENFHE---------TNITGDFLFR 245 (248)
Q Consensus 195 ~~y~~~v~~~~~~~~----~~~~~~t~~~~i~v~d~nd~~P~f~~---------~~~~g~~~~~ 245 (248)
..|.|++.+.+.... ....+++++++|+|+|+|| +|.|.. +..+|..++.
T Consensus 297 ~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~ 359 (559)
T 3q2w_A 297 RMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTT 359 (559)
T ss_dssp SEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEE
T ss_pred ceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEE
Confidence 999999988875321 1335678999999999999 588844 4445666553
No 2
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.6e-46 Score=340.89 Aligned_cols=233 Identities=27% Similarity=0.344 Sum_probs=211.6
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
+|+++++||||+...|.|+|+|.|.+++++++++.|.|.|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.|
T Consensus 65 ~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g 144 (546)
T 1l3w_A 65 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDN 144 (546)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCC
T ss_pred EEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCC
Confidence 37889999999999999999999999888889999999999999999999999999999999999999999999999998
Q ss_pred ---CCceEEEEEecCCC----CCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCC
Q psy669 81 ---PDQRISYKISAGNP----ESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDN 153 (248)
Q Consensus 81 ---~~~~i~y~i~~~~~----~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~ 153 (248)
.|+.++|+|.++.+ .++|.|++.+|.|+.+.+.||||....|.|.|.|+|+|.| ++++++.|+|+|.|+|||
T Consensus 145 ~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~-~~s~~~~v~I~V~DvNDn 223 (546)
T 1l3w_A 145 IDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGA-GLSVEGKAIIQITDANDN 223 (546)
T ss_dssp SSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHT-SCEEECCEEEEEECCCCC
T ss_pred CCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCC-CcceEEEEEEEEeecCCC
Confidence 68999999987663 4799999999999333578999999999999999999988 899999999999999999
Q ss_pred CCeeccCeeEEEecCCCCCCeeEEEEEEEeCC--C----------------------------------CCCCccCceEE
Q psy669 154 APEFEQNFYHVNIPETRHRDEPLSQVSLISTT--G----------------------------------RKLDRENQAEH 197 (248)
Q Consensus 154 ~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D--~----------------------------------~~ld~e~~~~y 197 (248)
+|+|....|.+.|+|+ ++|+.|++|.|+|+| . ++||||....|
T Consensus 224 ~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y 302 (546)
T 1l3w_A 224 APIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQY 302 (546)
T ss_dssp CCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCE
T ss_pred CCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEE
Confidence 9999999999999999 999999999999999 1 46899999999
Q ss_pred EEEEccCCCCce-eecCCceEEEEEEEEeeeCCcccccCC
Q psy669 198 VLETGSGESEAT-LETGSGESEATLEVLFENSTWENFHET 236 (248)
Q Consensus 198 ~~~v~~~~~~~~-~~~~~~t~~~~i~v~d~nd~~P~f~~~ 236 (248)
.|.+.+.+.... ....+.+++++|+|+|+|| +|.|...
T Consensus 303 ~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~ 341 (546)
T 1l3w_A 303 VLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPA 341 (546)
T ss_dssp EEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSC
T ss_pred EEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecc
Confidence 999988876421 2235678999999999999 9999544
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=3.2e-46 Score=339.29 Aligned_cols=235 Identities=24% Similarity=0.354 Sum_probs=212.9
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
+|+++++||||+...|.|+|.|.|.+++++++++.|.|.|.|+|||+|.|....|.++|+|++++|+.++++.|+|+|.+
T Consensus 59 ~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g 138 (550)
T 3q2v_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDD 138 (550)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCT
T ss_pred EEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 37889999999999999999999999888889999999999999999999999999999999999999999999999998
Q ss_pred ---CCceEEEEEecCCC----CCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCC
Q psy669 81 ---PDQRISYKISAGNP----ESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDN 153 (248)
Q Consensus 81 ---~~~~i~y~i~~~~~----~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~ 153 (248)
.|+.++|+|.++++ .++|.|++.+|.|+.+.+.||||....|.|.|.|+|+|.| ++++++.|+|+|.|+|||
T Consensus 139 ~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~-~~s~t~~v~I~V~DvNDn 217 (550)
T 3q2v_A 139 VNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGE-GLSTTAKAVITVKDINDN 217 (550)
T ss_dssp TTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGT-SCCCEEEEEEEEECCSCS
T ss_pred CCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCC-CeeEEEEEEEEecccCCC
Confidence 68999999987543 4689999999999444689999999999999999999888 899999999999999999
Q ss_pred CCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC------------------------------------CCCCccCceEE
Q psy669 154 APEFEQNFYHVNIPETRHRDEPLSQVSLISTTG------------------------------------RKLDRENQAEH 197 (248)
Q Consensus 154 ~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~------------------------------------~~ld~e~~~~y 197 (248)
+|+|.+..|.+.|.|+ +.|+.|++|.|+|+|. ++||||....|
T Consensus 218 ~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y 296 (550)
T 3q2v_A 218 APVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQY 296 (550)
T ss_dssp CCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEE
T ss_pred CCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceE
Confidence 9999999999999999 9999999999999983 56999999999
Q ss_pred EEEEccCCCCc-eeecCCceEEEEEEEEeeeCCcccccCCCC
Q psy669 198 VLETGSGESEA-TLETGSGESEATLEVLFENSTWENFHETNI 238 (248)
Q Consensus 198 ~~~v~~~~~~~-~~~~~~~t~~~~i~v~d~nd~~P~f~~~~~ 238 (248)
.|.+.+.+... .....+++++++|+|+|+|| +|.|....|
T Consensus 297 ~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~ 337 (550)
T 3q2v_A 297 ILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAER 337 (550)
T ss_dssp EEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSC
T ss_pred EEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcce
Confidence 99998877642 12335678999999999999 999955543
No 4
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.2e-45 Score=314.24 Aligned_cols=222 Identities=24% Similarity=0.292 Sum_probs=191.1
Q ss_pred CcEEccCCCCccC-----cEEEEEEEEEECCCC-CCeeeEEEEEEEEecCCCCCccCCCc--eEEEEECCCCCCeeEEEE
Q psy669 1 NIRTSTILDVETK-----THYWLTVFAQDHGVV-PLHARTDVYIQVQNVNDNVPMTLDPV--YYAQIVENQSGILPIVQL 72 (248)
Q Consensus 1 ~i~~~~~LD~E~~-----~~y~l~v~a~D~~~~-~~~~~~~v~i~V~DvNDn~P~f~~~~--~~~~v~E~~~~g~~v~~v 72 (248)
+|+++++||||.. ..|.|+|+|.|++.+ +++++++|+|.|.|+|||+|.|.... |.+.|+|++++|+.|+++
T Consensus 51 ~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v 130 (316)
T 3ubf_A 51 AVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTL 130 (316)
T ss_dssp EEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEEC
T ss_pred EEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEE
Confidence 3788999999984 579999999998866 67899999999999999999999987 899999999999999999
Q ss_pred EEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCC----CCCCceEEEEEEEEE
Q psy669 73 AASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGA----PAPLSSTTRVIISVE 148 (248)
Q Consensus 73 ~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~----p~~~~~~~~v~I~V~ 148 (248)
.|+|+|.+.| ++|+|..++..++|.|++.+|.| ++.++||||....|.|.|.|+|+|. | ++++++.|+|.|.
T Consensus 131 ~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i-~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~-~~~~~~~v~I~V~ 206 (316)
T 3ubf_A 131 QARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVV-RTRGTDLFQLDMEYVLYVKAEDQNGKVDDR-RFQSTPEERLSIV 206 (316)
T ss_dssp CEECSSTTCC--EEEEEEEEESSSCEEECTTTCEE-EECSSCCCCTTCEEEEEEEEEESCC--------CBCCCEEEEEE
T ss_pred EEECCCCCCc--eEEEEEeCCCCCEEEEECCccEE-EECCcCCcccCcEEEEEEEEEeCCCCCCCc-cccceEEEEEEEE
Confidence 9999999876 99999977777899999999999 8889999999999999999999874 4 5788899999999
Q ss_pred ecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC-----------------------------CCCCccCc---eE
Q psy669 149 DVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG-----------------------------RKLDRENQ---AE 196 (248)
Q Consensus 149 d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~-----------------------------~~ld~e~~---~~ 196 (248)
| |||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. ++||||.. ..
T Consensus 207 d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~ 285 (316)
T 3ubf_A 207 G-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHV 285 (316)
T ss_dssp E-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTCCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSE
T ss_pred c-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCCCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCce
Confidence 9 999999999999999999999999999999999883 78999998 78
Q ss_pred EEEEEccCCCCceeecCCceEEEEEEEEeeeCCc
Q psy669 197 HVLETGSGESEATLETGSGESEATLEVLFENSTW 230 (248)
Q Consensus 197 y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~ 230 (248)
|.|.+.+.++.. ..+++++++|+|+|+||||
T Consensus 286 y~l~V~A~dd~g---~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 286 YSLIVTATEDSG---GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEEEEEEEESSS---SCEEEEEEEEEEECC----
T ss_pred EEEEEEEEECCC---CCEEEEEEEEEEEecCCCC
Confidence 999998874333 3567899999999999996
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=3.3e-45 Score=347.10 Aligned_cols=233 Identities=27% Similarity=0.344 Sum_probs=212.0
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
+|+++++||||+...|.|+|+|.|.+++++++++.|+|+|.|+|||+|.|....|.++|+|++++|+.|+++.|+|+|.+
T Consensus 214 ~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g 293 (880)
T 1q55_A 214 WMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDN 293 (880)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCC
T ss_pred EEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCC
Confidence 37889999999999999999999999888889999999999999999999999999999999999999999999999998
Q ss_pred ---CCceEEEEEecCCC----CCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCC
Q psy669 81 ---PDQRISYKISAGNP----ESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDN 153 (248)
Q Consensus 81 ---~~~~i~y~i~~~~~----~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~ 153 (248)
.|+.++|+|.++.+ .++|.|++.||.|+.+.+.||||....|.|.|.|+|.|.| +++++++|+|+|.|+|||
T Consensus 294 ~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~-~~s~~~~v~I~V~DvNDn 372 (880)
T 1q55_A 294 IDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGA-GLSVEGKAIIQITDANDN 372 (880)
T ss_dssp SSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHT-SCEEECCEEEEEECCCCC
T ss_pred CCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCC-CccceeEEEEEEEeccCC
Confidence 68999999987663 4799999999999333578999999999999999999888 899999999999999999
Q ss_pred CCeeccCeeEEEecCCCCCCeeEEEEEEEeCC--C----------------------------------CCCCccCceEE
Q psy669 154 APEFEQNFYHVNIPETRHRDEPLSQVSLISTT--G----------------------------------RKLDRENQAEH 197 (248)
Q Consensus 154 ~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D--~----------------------------------~~ld~e~~~~y 197 (248)
+|+|....|.+.|+|+ ++|+.|++|.|+|+| . ++||||....|
T Consensus 373 ~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y 451 (880)
T 1q55_A 373 APIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQY 451 (880)
T ss_dssp CCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCE
T ss_pred CCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcE
Confidence 9999999999999999 999999999999999 1 46999999999
Q ss_pred EEEEccCCCCce-eecCCceEEEEEEEEeeeCCcccccCC
Q psy669 198 VLETGSGESEAT-LETGSGESEATLEVLFENSTWENFHET 236 (248)
Q Consensus 198 ~~~v~~~~~~~~-~~~~~~t~~~~i~v~d~nd~~P~f~~~ 236 (248)
.|++.+.+.... ....+.+++++|+|+|+|| +|.|.++
T Consensus 452 ~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~ 490 (880)
T 1q55_A 452 VLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPA 490 (880)
T ss_dssp EEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSC
T ss_pred EEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecC
Confidence 999988875421 2235678999999999999 9999544
No 6
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=7.7e-45 Score=309.41 Aligned_cols=205 Identities=29% Similarity=0.445 Sum_probs=183.3
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCC-CCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGV-VPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 79 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~-~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 79 (248)
+|+++++||||+...|.|+|+|+|+++ +++++.+.+.|.|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 135 (322)
T 2a62_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADD 135 (322)
T ss_dssp EEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSC
T ss_pred EEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 378899999999999999999999875 4678889999999999999999999999999999999999999999999996
Q ss_pred ---CCCceEEEEEecCCCCCcEEEeCCCeEEEEec-CCCCccccceeEEEEEEEeCCCCC-CCceEEEEEEEEEecCCCC
Q psy669 80 ---DPDQRISYKISAGNPESYFNIDIGSGLISTTG-RKLDRENQAEHVLEVTVTDDGAPA-PLSSTTRVIISVEDVNDNA 154 (248)
Q Consensus 80 ---~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~-~~ld~e~~~~~~l~v~a~d~~~p~-~~~~~~~v~I~V~d~Nd~~ 154 (248)
|.|+.++|+|.+++ .+|.|++.+|.| ++. +.||||....|.|.|.|+|.|.|. ++++++.|+|+|.|+|||+
T Consensus 136 ~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~i-~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~ 212 (322)
T 2a62_A 136 PVYGNSAKLVYSILEGQ--PYFSIEPETAII-KTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNP 212 (322)
T ss_dssp SSSTTSSCEEEEEEECT--TTEEECTTTCCE-EECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCC
T ss_pred CCCCccEEEEEEEccCC--CCEEEecCCCEE-EecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCC
Confidence 67889999998775 489999999999 666 899999999999999999998872 4889999999999999999
Q ss_pred CeeccCeeEEEecCCCCCCeeEEEEEEEeCCCCCCCccCceEEEEEEccCCCCceee
Q psy669 155 PEFEQNFYHVNIPETRHRDEPLSQVSLISTTGRKLDRENQAEHVLETGSGESEATLE 211 (248)
Q Consensus 155 P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~~~ld~e~~~~y~~~v~~~~~~~~~~ 211 (248)
|.|.+..|.+.|+|++++|+.|++|.|+|+|.+ .+....|+|.-+...+.|.+.
T Consensus 213 P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g---~n~~i~Y~i~~g~~~~~F~I~ 266 (322)
T 2a62_A 213 PKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIG---ENAQSSYDIIDGDGTALFEIT 266 (322)
T ss_dssp CCCSCSEEEEEECSCCSSCCEEEEEECCCSSCG---GGTCCEEEEC---CCSSBCCB
T ss_pred CeecCCCceeEeECCCCCCcEEEEEEEEeCCCC---CCceEEEEEECCCCCCcEEEe
Confidence 999999999999999999999999999999964 355678888766666667665
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=6.2e-44 Score=324.25 Aligned_cols=227 Identities=25% Similarity=0.316 Sum_probs=208.0
Q ss_pred cEE-ccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 2 IRT-STILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 2 i~~-~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
|++ .++||||+...|.|+|+|+|+|+++++++++|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|.+
T Consensus 172 i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~ 250 (550)
T 3q2v_A 172 ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAP 250 (550)
T ss_dssp EEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCT
T ss_pred EEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCC
Confidence 444 5799999999999999999998889999999999999999999999999999999999 99999999999999998
Q ss_pred CCc--eEEEEEecCCCCCcEEEe----CCCeEEEEecCCCCccccceeEEEEEEEeCCC---CCCCceEEEEEEEEEecC
Q psy669 81 PDQ--RISYKISAGNPESYFNID----IGSGLISTTGRKLDRENQAEHVLEVTVTDDGA---PAPLSSTTRVIISVEDVN 151 (248)
Q Consensus 81 ~~~--~i~y~i~~~~~~~~F~id----~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~---p~~~~~~~~v~I~V~d~N 151 (248)
.++ .++|+|.. +..+.|.|+ ..+|.| ++.+.||||....|.|.|.|+|++. | .+++++.|+|+|.|+|
T Consensus 251 ~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i-~~~~~LD~E~~~~y~l~V~a~D~~~~~~~-~~~~~~~v~I~V~DvN 327 (550)
T 3q2v_A 251 NTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGIL-KTAKGLDFEAKQQYILHVRVENEEPFEGS-LVPSTATVTVDVVDVN 327 (550)
T ss_dssp TSTTTCEEEEESS-CSSCCEEEEECTTTCCEEE-EESSCCCTTTCSEEEEEEEEEESSCCCSS-CCCEEEEEEEEEECCC
T ss_pred CCCcEEEEEEEEe-CCCCcEEEEecCCCccEEE-EecccCCccccceEEEEEEEEeCCCCCCC-ccceEEEEEEEEEecC
Confidence 766 56799986 667899998 688999 8899999999999999999999873 4 5789999999999999
Q ss_pred CCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC------------------------------CCCCccCc-----eE
Q psy669 152 DNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG------------------------------RKLDRENQ-----AE 196 (248)
Q Consensus 152 d~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~------------------------------~~ld~e~~-----~~ 196 (248)
| +|.|....|.+.|+|++++|+.|++|.|+|+|. +.||||.. ..
T Consensus 328 D-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~ 406 (550)
T 3q2v_A 328 E-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAEHVKNST 406 (550)
T ss_dssp C-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTTTCCSSE
T ss_pred C-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCcccccccCCCE
Confidence 9 999999999999999999999999999999994 67999998 89
Q ss_pred EEEEEccCCCCceeecCCceEEEEEEEEeeeCCcccccC
Q psy669 197 HVLETGSGESEATLETGSGESEATLEVLFENSTWENFHE 235 (248)
Q Consensus 197 y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~ 235 (248)
|.|++.+.+... ...+++++++|+|+|+|||+|.|.+
T Consensus 407 y~l~V~A~D~g~--p~~s~~~~v~I~V~DvNDn~P~~~~ 443 (550)
T 3q2v_A 407 YVALIIATDDGS--PIATGTGTLLLVLLDVNDNAPIPEP 443 (550)
T ss_dssp EEEEEEEECCSS--SCCCEEEEEEEEEECCCCCCCEESC
T ss_pred EEEEEEEEeCCC--CcceeEEEEEEEEEeCCCCCCcCcC
Confidence 999999888754 4567789999999999999999853
No 8
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=4.2e-44 Score=315.53 Aligned_cols=230 Identities=24% Similarity=0.257 Sum_probs=203.2
Q ss_pred cEEccCCCCccC---cEEEEEEEEEECCCC---CCeeeEEEEEEEEecCCCCCccCCCc--eEEEEECCCCCCeeEEEEE
Q psy669 2 IRTSTILDVETK---THYWLTVFAQDHGVV---PLHARTDVYIQVQNVNDNVPMTLDPV--YYAQIVENQSGILPIVQLA 73 (248)
Q Consensus 2 i~~~~~LD~E~~---~~y~l~v~a~D~~~~---~~~~~~~v~i~V~DvNDn~P~f~~~~--~~~~v~E~~~~g~~v~~v~ 73 (248)
|+++++||||+. ..|.|.|.|+|.+.+ ++++.++|+|+|.|+|||+|.|.... |...|+|++++|+.|+++.
T Consensus 57 i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~ 136 (419)
T 3ubh_A 57 VRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQ 136 (419)
T ss_dssp EEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECC
T ss_pred EEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEE
Confidence 678999999998 789999999998754 57788999999999999999999887 7899999999999999999
Q ss_pred EEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCC---CCCceEEEEEEEEEec
Q psy669 74 ASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAP---APLSSTTRVIISVEDV 150 (248)
Q Consensus 74 a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p---~~~~~~~~v~I~V~d~ 150 (248)
|+|+|.|.| ++|+|..++..++|.|++.+|.| ++.+.||+|....|.|.|.|+|+|.+ .++++++.++|.|.|
T Consensus 137 A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i-~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d- 212 (419)
T 3ubh_A 137 ARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVV-RTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG- 212 (419)
T ss_dssp EECSSTTCC--EEEEEEEESSSSCEEECTTTCEE-EECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-
T ss_pred EECCCCCce--eEEEEEeCCCCCeEEEeCCceEE-EEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-
Confidence 999999766 89999887777899999999999 88899999999999999999997653 145778889999999
Q ss_pred CCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC-----------------------------CCCCccCce---EEE
Q psy669 151 NDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG-----------------------------RKLDRENQA---EHV 198 (248)
Q Consensus 151 Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~-----------------------------~~ld~e~~~---~y~ 198 (248)
|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. ++||||... .|.
T Consensus 213 ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~ 292 (419)
T 3ubh_A 213 GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYS 292 (419)
T ss_dssp SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSCCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEE
T ss_pred CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCCCceEEEEecCCCCCCcEEEECCCCEEEECcccCccccccccEEE
Confidence 999999999999999999999999999999999873 689999875 799
Q ss_pred EEEccCCCCceeecCCceEEEEEEEEeeeCCcccccCCCC
Q psy669 199 LETGSGESEATLETGSGESEATLEVLFENSTWENFHETNI 238 (248)
Q Consensus 199 ~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~~~~ 238 (248)
|.+.+.++.. ..+.+++++|+|+|+|||+|.|..+.|
T Consensus 293 l~V~a~dd~~---~~s~~~~v~I~V~DvNDn~P~f~~~~~ 329 (419)
T 3ubh_A 293 LIVTATEDSG---GFSTSVDLTIRVTDVNDNAPKFELPDY 329 (419)
T ss_dssp EEEEEECTTT---SCEEEEEEEEEEECCCCCCCEESSSEE
T ss_pred EEEEEEeCCC---CcEEEEEEEEEEEccCCCCCcccCCcc
Confidence 9998875432 345688999999999999999966554
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=322.90 Aligned_cols=230 Identities=26% Similarity=0.295 Sum_probs=208.1
Q ss_pred cEEcc-CCCCccCcEEEEEEEEEECCC---CCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeC
Q psy669 2 IRTST-ILDVETKTHYWLTVFAQDHGV---VPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 77 (248)
Q Consensus 2 i~~~~-~LD~E~~~~y~l~v~a~D~~~---~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~ 77 (248)
|++.+ +||||+...|.|+|+|+|+++ ++++++++|+|+|.|+|||+|.|....|...|+|+. +|+.++++.|+|+
T Consensus 171 i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~ 249 (559)
T 3q2w_A 171 IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDK 249 (559)
T ss_dssp EEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECC
T ss_pred EEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcC
Confidence 56666 999999999999999999865 458999999999999999999999999999999997 8999999999999
Q ss_pred CCCC--CceEEEEEecCCCCCcEEE----eCCCeEEEEecCCCCccccceeEEEEEEEeCC------CCCCCceEEEEEE
Q psy669 78 DLDP--DQRISYKISAGNPESYFNI----DIGSGLISTTGRKLDRENQAEHVLEVTVTDDG------APAPLSSTTRVII 145 (248)
Q Consensus 78 D~~~--~~~i~y~i~~~~~~~~F~i----d~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~------~p~~~~~~~~v~I 145 (248)
|.+. ++.++|+|..++..+.|.| +..+|.| ++.++||||....|.|.|.|+|.+ .| ++++++.|+|
T Consensus 250 D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i-~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~-~~~s~~~v~I 327 (559)
T 3q2w_A 250 DQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLV-TVVKPIDFETNRMFVLTVAAENQVPLAKGIQH-PPQSTATVSV 327 (559)
T ss_dssp SCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEE-EECSCCCTTTCSEEEEEEECCBSSCCCTTCCC-CGGGEEEEEE
T ss_pred CCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEE-EeCCCCCCccCceEEEEEEEEcCCccccCCCC-CCceEEEEEE
Confidence 9976 6689999998888899999 5778999 889999999999999999999964 24 6889999999
Q ss_pred EEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC------------------------------CCCCccCc-
Q psy669 146 SVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG------------------------------RKLDRENQ- 194 (248)
Q Consensus 146 ~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~------------------------------~~ld~e~~- 194 (248)
+|.|+|| +|.|....|.+.|+|++++|+.|++|.|+|+|. +.||||..
T Consensus 328 ~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~ 406 (559)
T 3q2w_A 328 TVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPN 406 (559)
T ss_dssp EEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTT
T ss_pred EEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCccccc
Confidence 9999999 699999999999999999999999999999993 67999976
Q ss_pred ---eEEEEEEccCCCCceeecCCceEEEEEEEEeeeCCcccccCCC
Q psy669 195 ---AEHVLETGSGESEATLETGSGESEATLEVLFENSTWENFHETN 237 (248)
Q Consensus 195 ---~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~~~ 237 (248)
..|.|++.+.+... ...+++++++|+|+|+|||+|.|.+..
T Consensus 407 ~~~~~y~l~V~A~D~g~--p~~ss~~~v~I~V~DvNDn~P~f~~~~ 450 (559)
T 3q2w_A 407 VKNNIYNATFLASDNGI--PPMSGTGTLQIYLLDINDNAPQVLPQE 450 (559)
T ss_dssp SCSSEEEEEEEEEECSS--SCCEEEEEEEEEEECCSCCCCEESCTT
T ss_pred ccCCEEEEEEEEEcCCC--CcceEEEEEEEEEEEccCCCCcccCCc
Confidence 89999998888754 346778999999999999999996543
No 10
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=3.3e-44 Score=325.66 Aligned_cols=227 Identities=30% Similarity=0.357 Sum_probs=207.4
Q ss_pred cEE-ccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCC--
Q psy669 2 IRT-STILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD-- 78 (248)
Q Consensus 2 i~~-~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D-- 78 (248)
|++ .++||||....|.|+|+|+|+++++++++++|.|.|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|
T Consensus 178 i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~ 256 (546)
T 1l3w_A 178 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMP 256 (546)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCT
T ss_pred EEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCC
Confidence 556 4799999999999999999999889999999999999999999999999999999999 999999999999999
Q ss_pred CCCCceEEEEEecCCCCCcEEEe--C--CCeEEEEecCCCCccccceeEEEEEEEeCCC---CCCCceEEEEEEEEEecC
Q psy669 79 LDPDQRISYKISAGNPESYFNID--I--GSGLISTTGRKLDRENQAEHVLEVTVTDDGA---PAPLSSTTRVIISVEDVN 151 (248)
Q Consensus 79 ~~~~~~i~y~i~~~~~~~~F~id--~--~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~---p~~~~~~~~v~I~V~d~N 151 (248)
.+.|+.++|+|.+ ++.+.|.|+ + .+|.| ++.++||||....|.|.|.|+|++. | .++++++|+|+|.|+|
T Consensus 257 ~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i-~~~~~LD~E~~~~y~l~V~a~D~~~~~~~-~~s~~~~v~I~V~DvN 333 (546)
T 1l3w_A 257 GTPAWQAVYKIRV-NEGGFFNITTDPESNQGIL-TTAKGLDFELRKQYVLQITVENAEPFSVP-LPTSTATVTVTVEDVN 333 (546)
T ss_dssp TSTTSCEECCBSC-CTTSCEEEEECTTTCCEEE-EESSCCCCSSCCCEEEEECCEESSCCSSC-CCCCCEEEEEEEECCC
T ss_pred CCCCcEEEEEEEe-CCCceEEEEecCCCCeEEE-EECccCCcccccEEEEEEEEEECCCCCCC-CcceeEEEEEEEEcCC
Confidence 6779999999987 667899996 3 57999 8889999999999999999999763 4 5789999999999999
Q ss_pred CCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC------------------------------CCCCccCc----eEE
Q psy669 152 DNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG------------------------------RKLDRENQ----AEH 197 (248)
Q Consensus 152 d~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~------------------------------~~ld~e~~----~~y 197 (248)
| +|.|....|.+.|+|++++|+.|++|.|+|+|. ++||||.. ..|
T Consensus 334 D-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y 412 (546)
T 1l3w_A 334 E-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTY 412 (546)
T ss_dssp C-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCC
T ss_pred C-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCccccCCCCEE
Confidence 9 999999999999999999999999999999993 67999997 889
Q ss_pred EEEEccCCCCceeecCCceEEEEEEEEeeeCCcccccC
Q psy669 198 VLETGSGESEATLETGSGESEATLEVLFENSTWENFHE 235 (248)
Q Consensus 198 ~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~ 235 (248)
.|.+.+.+... ...+++++++|+|+|+|||+|.|.+
T Consensus 413 ~l~V~a~D~g~--p~~s~~~~v~I~V~DvNDn~P~f~~ 448 (546)
T 1l3w_A 413 TVIMLVTDDGV--SVGTGTGTLILHVLDVNDNGPVPSP 448 (546)
T ss_dssp EEEEEEEECSS--SCCCCCEEEECCBCCCCCSCCCBSC
T ss_pred EEEEEEEECCC--CCcEeEEEEEEEEEECCCCcCCccC
Confidence 99998888743 3467789999999999999999963
No 11
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.2e-42 Score=329.70 Aligned_cols=226 Identities=31% Similarity=0.355 Sum_probs=207.1
Q ss_pred cEEc-cCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCC--
Q psy669 2 IRTS-TILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD-- 78 (248)
Q Consensus 2 i~~~-~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D-- 78 (248)
|++. ++||||....|.|+|+|+|+++++++++++|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+|
T Consensus 327 I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~ 405 (880)
T 1q55_A 327 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMP 405 (880)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCT
T ss_pred EEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCC
Confidence 5564 789999999999999999999889999999999999999999999999999999999 999999999999999
Q ss_pred CCCCceEEEEEecCCCCCcEEEe--C--CCeEEEEecCCCCccccceeEEEEEEEeCC---CCCCCceEEEEEEEEEecC
Q psy669 79 LDPDQRISYKISAGNPESYFNID--I--GSGLISTTGRKLDRENQAEHVLEVTVTDDG---APAPLSSTTRVIISVEDVN 151 (248)
Q Consensus 79 ~~~~~~i~y~i~~~~~~~~F~id--~--~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~---~p~~~~~~~~v~I~V~d~N 151 (248)
.+.|+.++|+|.+ +..+.|.|+ + .+|.| ++.++||||....|.|.|.|+|++ .| .++++++|+|+|.|+|
T Consensus 406 ~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~i-~~~~~LD~E~~~~y~l~V~A~D~~~~~~~-~~sst~tV~I~V~DvN 482 (880)
T 1q55_A 406 GTPAWQAVYKIRV-NEGGFFNITTDPESNQGIL-TTAKGLDFELRKQYVLQITVENAEPFSVP-LPTSTATVTVTVEDVN 482 (880)
T ss_dssp TSTTSCEECCBSC-CTTSCEEEEECTTTCCEEE-EESSCCCCSSCCCEEEEECCEESSCCSSC-CCCCCEEEEEEEECCC
T ss_pred CCCCceEEEEEec-CCCceEEEEecCCCceEEE-ecccCCCcccCCcEEEEEEEEECCCCCCC-CcceeEEEEEEEEeCC
Confidence 6679999999987 667899995 3 57999 889999999999999999999976 34 5789999999999999
Q ss_pred CCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC------------------------------CCCCccCc----eEE
Q psy669 152 DNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG------------------------------RKLDRENQ----AEH 197 (248)
Q Consensus 152 d~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~------------------------------~~ld~e~~----~~y 197 (248)
| +|+|.+..|.+.|+|++++|+.|++|.|+|+|. ++||||.. ..|
T Consensus 483 D-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y 561 (880)
T 1q55_A 483 E-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTY 561 (880)
T ss_dssp C-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSSCCSSCC
T ss_pred C-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCccCcccccCCCCEE
Confidence 9 999999999999999999999999999999993 67999987 889
Q ss_pred EEEEccCCCCceeecCCceEEEEEEEEeeeCCccccc
Q psy669 198 VLETGSGESEATLETGSGESEATLEVLFENSTWENFH 234 (248)
Q Consensus 198 ~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~ 234 (248)
.|++.+.+... ...+++++++|+|+|+|||+|.|.
T Consensus 562 ~l~V~A~D~g~--p~~sst~tv~I~V~DvNDn~P~f~ 596 (880)
T 1q55_A 562 TVIMLVTDDGV--SVGTGTGTLILHVLDVNDNGPVPS 596 (880)
T ss_dssp EEEEEEEECSS--SCCCCCEEEECCBCCCCCSCCCBS
T ss_pred EEEEEEEECCC--CCcEeEEEEEEEEEeCCCCCCCcc
Confidence 99998888743 456778999999999999999995
No 12
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=6.9e-39 Score=282.30 Aligned_cols=215 Identities=26% Similarity=0.332 Sum_probs=187.3
Q ss_pred cEEccCCCCccCcEEEEEEEEEECCCC----CCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeC
Q psy669 2 IRTSTILDVETKTHYWLTVFAQDHGVV----PLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 77 (248)
Q Consensus 2 i~~~~~LD~E~~~~y~l~v~a~D~~~~----~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~ 77 (248)
|++.+.||||....|.|+|+|+|++++ ++++++.+.|.|.| |||+|.|.+..|.+.|+||.++|+.|+++.|+|+
T Consensus 168 i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 246 (419)
T 3ubh_A 168 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSF 246 (419)
T ss_dssp EEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECS
T ss_pred EEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecC
Confidence 678889999999999999999998754 56788899999999 9999999999999999999999999999999998
Q ss_pred CCCCCceEEEEEe-cCCCCCcEEEeCCCeEEEEecCCCCccccc---eeEEEEEEEeCCCCCCCceEEEEEEEEEecCCC
Q psy669 78 DLDPDQRISYKIS-AGNPESYFNIDIGSGLISTTGRKLDRENQA---EHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDN 153 (248)
Q Consensus 78 D~~~~~~i~y~i~-~~~~~~~F~id~~tg~i~~~~~~ld~e~~~---~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~ 153 (248)
| |+.++|+|. .++..++|.|++.+|.| ++.++||||... .|.|.|.|+|.+ + ++++++.|+|+|.|+|||
T Consensus 247 d---n~~i~Ysi~~~~~~~~~F~I~~~tG~i-~~~~~LD~E~~~~~~~y~l~V~a~dd~-~-~~s~~~~v~I~V~DvNDn 320 (419)
T 3ubh_A 247 A---DREIRYTLKAQGQGAGTFNIGPTSGIV-KLAKELDFEDLRQPHVYSLIVTATEDS-G-GFSTSVDLTIRVTDVNDN 320 (419)
T ss_dssp S---CCCCEEEEEESSSCCSSEEECTTTCEE-EECSCCCTTCTTSCSEEEEEEEEECTT-T-SCEEEEEEEEEEECCCCC
T ss_pred C---CCceEEEEecCCCCCCcEEEECCCCEE-EECcccCccccccccEEEEEEEEEeCC-C-CcEEEEEEEEEEEccCCC
Confidence 7 788999997 46667899999999999 888999999865 699999999754 3 678999999999999999
Q ss_pred CCeeccCeeEE-EecCCCCCCeeEEEEEEEeCCC--------------------------CCCCccC-ceEEEEEEccCC
Q psy669 154 APEFEQNFYHV-NIPETRHRDEPLSQVSLISTTG--------------------------RKLDREN-QAEHVLETGSGE 205 (248)
Q Consensus 154 ~P~f~~~~y~~-~v~E~~~~g~~v~~v~A~D~D~--------------------------~~ld~e~-~~~y~~~v~~~~ 205 (248)
+|.|..+.|.. .|+|++++|+.|++|.|+|+|. +.||||. ...|.|.+.+.|
T Consensus 321 ~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~F~Id~~G~i~~~~~ld~E~~~~~y~l~V~a~D 400 (419)
T 3ubh_A 321 APKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKD 400 (419)
T ss_dssp CCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESCTTEEECTTCEEEECSCSSSSCTTCEEEEEEEEEE
T ss_pred CCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcCCcEEECCCeEEEECcccCcccCCceEEEEEEEEE
Confidence 99999999987 7999999999999999999994 6789998 578999888887
Q ss_pred CCceeecCCceEEEEEEEEe
Q psy669 206 SEATLETGSGESEATLEVLF 225 (248)
Q Consensus 206 ~~~~~~~~~~t~~~~i~v~d 225 (248)
... ...+++++++|+|.|
T Consensus 401 ~G~--p~~sst~~v~I~v~n 418 (419)
T 3ubh_A 401 KGE--PPKSGVATVRVYTKN 418 (419)
T ss_dssp CCS--SCCEEEEEEEEEEEC
T ss_pred CCc--CCceeEEEEEEEEec
Confidence 743 334445555555543
No 13
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=3.5e-36 Score=242.08 Aligned_cols=153 Identities=31% Similarity=0.495 Sum_probs=135.4
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCC-CCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGV-VPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 79 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~-~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 79 (248)
+|+++++||||..+.|.|+|.|+|++. +++++.+.|.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 57 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~ 136 (215)
T 2a4e_A 57 NIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADD 136 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSC
T ss_pred EEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCC
Confidence 378899999999999999999999875 5688999999999999999999999999999999999999999999999997
Q ss_pred ---CCCceEEEEEecCCCCCcEEEeCCCeEEEEec-CCCCccccceeEEEEEEEeCCCC-CCCceEEEEEEEEEecCCCC
Q psy669 80 ---DPDQRISYKISAGNPESYFNIDIGSGLISTTG-RKLDRENQAEHVLEVTVTDDGAP-APLSSTTRVIISVEDVNDNA 154 (248)
Q Consensus 80 ---~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~-~~ld~e~~~~~~l~v~a~d~~~p-~~~~~~~~v~I~V~d~Nd~~ 154 (248)
|.|+.++|+|.+++ .+|.|++.+|.| ++. +.||||....|.|.|.|+|+|.| .+++++++|+|+|.|+|||+
T Consensus 137 ~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~I-~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~ 213 (215)
T 2a4e_A 137 PTYGNSAKLVYSILEGQ--PYFSVEAQTGII-RTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDD 213 (215)
T ss_dssp TTTCSSSCCEEEEEEST--TTEEECTTTCEE-EECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-----
T ss_pred CCCCCceEEEEEEeCCC--CcEEEeCCccEE-EEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCC
Confidence 77899999999875 489999999999 777 89999999999999999999875 25889999999999999999
Q ss_pred Ce
Q psy669 155 PE 156 (248)
Q Consensus 155 P~ 156 (248)
|.
T Consensus 214 P~ 215 (215)
T 2a4e_A 214 DK 215 (215)
T ss_dssp --
T ss_pred CC
Confidence 95
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.5e-36 Score=243.70 Aligned_cols=177 Identities=25% Similarity=0.337 Sum_probs=160.3
Q ss_pred CCCCccCCCceE--EEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCcccccee
Q psy669 45 DNVPMTLDPVYY--AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEH 122 (248)
Q Consensus 45 Dn~P~f~~~~~~--~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~ 122 (248)
|++|.|....|. +.|+|++++|+.|+++.|+|+|. +.++|+|.+++..++|.|++.+|.| ++.+.||||....|
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i-~~~~~LD~E~~~~y 78 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVV-WLRQPLDRETKSEF 78 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEE-EESSCCCTTTCCEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEE-EECCccCCcccceE
Confidence 589999999997 69999999999999999999994 5689999876656789999999999 88899999999999
Q ss_pred EEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC----------------
Q psy669 123 VLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG---------------- 186 (248)
Q Consensus 123 ~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---------------- 186 (248)
.|.|.|+|++. .+++.|+|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.
T Consensus 79 ~l~v~a~D~~~----~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~ 154 (210)
T 3mvs_A 79 TVEFSVSDHQG----VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPF 154 (210)
T ss_dssp EEEEEEECSSC----EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSS
T ss_pred EEEEEEEeCCC----CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCC
Confidence 99999999864 3578999999999999999999999999999999999999999999993
Q ss_pred -------------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEeeeCCc
Q psy669 187 -------------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTW 230 (248)
Q Consensus 187 -------------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~ 230 (248)
++||||....|.|.+.+.+.... ...+++++++|+|.|+|||+
T Consensus 155 F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~-~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 155 FAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKT-RPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSS-SCCEEEEEEEEEEECCCCCC
T ss_pred EEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCC-CCCEEEEEEEEEEEccCCCC
Confidence 78999999999999988886432 34567899999999999986
No 15
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.2e-35 Score=239.01 Aligned_cols=176 Identities=27% Similarity=0.390 Sum_probs=150.2
Q ss_pred ceEEEEECCC--CCCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeC
Q psy669 54 VYYAQIVENQ--SGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDD 131 (248)
Q Consensus 54 ~~~~~v~E~~--~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~ 131 (248)
.|.+.|.|+. +.|+.|+++ |+|+|.| ++.++|+|.+++...+|.|++.+|.| ++.+.||||....|.|.|.|+|.
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~D~ 81 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNI-HATKTLDREERAQYTLMAQAVDR 81 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEE-EECSCCCTTTCSEEEEEEEEEET
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEE-EECCccCCccCCEEEEEEEEEEC
Confidence 4688999995 578989888 8999998 78999999876555799999999999 88899999999999999999998
Q ss_pred CCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCC----C---------------------
Q psy669 132 GAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTT----G--------------------- 186 (248)
Q Consensus 132 ~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D----~--------------------- 186 (248)
+.+.++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+| +
T Consensus 82 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~ 161 (215)
T 2a4e_A 82 DTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQ 161 (215)
T ss_dssp TTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTTTEEECTT
T ss_pred CCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCCcEEEeCC
Confidence 753267889999999999999999999999999999999999999999999998 2
Q ss_pred --------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEeeeCCccc
Q psy669 187 --------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWEN 232 (248)
Q Consensus 187 --------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~ 232 (248)
++||||....|.|.+.+.+........+++++++|+|+|+|||+|.
T Consensus 162 tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 162 TGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred ccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 4699999999999999988765433456789999999999999995
No 16
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=256.31 Aligned_cols=183 Identities=16% Similarity=0.138 Sum_probs=155.4
Q ss_pred ccCCCceEEEEECCCCCCeeEEEEEEEeCCCCC--CceEE------EEEecCCCCCcEEEeCCCeEEEEecCCCCccccc
Q psy669 49 MTLDPVYYAQIVENQSGILPIVQLAASDGDLDP--DQRIS------YKISAGNPESYFNIDIGSGLISTTGRKLDRENQA 120 (248)
Q Consensus 49 ~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~--~~~i~------y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~ 120 (248)
.|.+..|.+.|+|++++|+.|+++.|+|+|.+. +..+. |++..+ ...+|.|++.+|.| ++.++||||...
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i-~~~~~LDrE~~~ 79 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLL-YLQRSLDHSSWE 79 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEE-EESSCBCHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEE-EECCcCChhHhh
Confidence 588999999999999999999999999999854 44554 555443 35689999999999 889999999999
Q ss_pred ee------------EEEEEEEeCCCCC-CCceEEEEEEEEEecCCCCCe----------eccCeeEEEecCCCCCCeeEE
Q psy669 121 EH------------VLEVTVTDDGAPA-PLSSTTRVIISVEDVNDNAPE----------FEQNFYHVNIPETRHRDEPLS 177 (248)
Q Consensus 121 ~~------------~l~v~a~d~~~p~-~~~~~~~v~I~V~d~Nd~~P~----------f~~~~y~~~v~E~~~~g~~v~ 177 (248)
.| .|.|.|+|.|.|. ++++++.|+|+|.|+|||+|+ |.+..|.+.|+|++++|+.|+
T Consensus 80 ~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~ 159 (246)
T 2x2u_A 80 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQ 159 (246)
T ss_dssp HHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEE
T ss_pred hhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEE
Confidence 99 9999999998763 467889999999999999999 999999999999999999999
Q ss_pred EEEEEeCCC------------------------------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEeee
Q psy669 178 QVSLISTTG------------------------------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFEN 227 (248)
Q Consensus 178 ~v~A~D~D~------------------------------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~n 227 (248)
+|.|+|+|. ++||||....|.|.+.|.+.... ...+++++++|+|+|+|
T Consensus 160 ~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~-p~~ss~~~v~I~V~DvN 238 (246)
T 2x2u_A 160 FRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGA-REEVVMVPFPVTVYDED 238 (246)
T ss_dssp CSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC----CCEEEEEEEEEEEECSS
T ss_pred EEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCC-CcceEEEEEEEEEEEeC
Confidence 999999972 67999999999999986652222 45677899999999999
Q ss_pred CCccccc
Q psy669 228 STWENFH 234 (248)
Q Consensus 228 d~~P~f~ 234 (248)
||+|.|.
T Consensus 239 Dn~P~F~ 245 (246)
T 2x2u_A 239 DSAPEFE 245 (246)
T ss_dssp CCSCCCC
T ss_pred CCCCccC
Confidence 9999996
No 17
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=252.74 Aligned_cols=155 Identities=21% Similarity=0.154 Sum_probs=140.1
Q ss_pred CcEEccCCCCccCcEE------------EEEEEEEECCCC--CCeeeEEEEEEEEecCCCCCc----------cCCCceE
Q psy669 1 NIRTSTILDVETKTHY------------WLTVFAQDHGVV--PLHARTDVYIQVQNVNDNVPM----------TLDPVYY 56 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y------------~l~v~a~D~~~~--~~~~~~~v~i~V~DvNDn~P~----------f~~~~~~ 56 (248)
+|+++++||||....| .|+|.|+|++.+ +++++++|.|.|.|+|||+|. |....|.
T Consensus 66 ~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~ 145 (246)
T 2x2u_A 66 LLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPS 145 (246)
T ss_dssp EEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCC
T ss_pred EEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEE
Confidence 3789999999999999 999999999987 688899999999999999999 9999999
Q ss_pred EEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEe-CCCCC
Q psy669 57 AQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTD-DGAPA 135 (248)
Q Consensus 57 ~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d-~~~p~ 135 (248)
+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..++ ..+|.|++.+|.| ++.+.||||....|.|.|.|+| .|.|
T Consensus 146 ~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~V~A~d~dg~p- 222 (246)
T 2x2u_A 146 FRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEV-STRWALDREQREKYELVAVCTVHAGAR- 222 (246)
T ss_dssp EEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEE-EESSCBCTTTCSEEEEEEEEEEC---C-
T ss_pred EEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEE-EeCCccCccccceEEEEEEEEecCCCC-
Confidence 9999999999999999999999999999999999775 6799999999999 8889999999999999999998 5667
Q ss_pred CCceEEEEEEEEEecCCCCCeec
Q psy669 136 PLSSTTRVIISVEDVNDNAPEFE 158 (248)
Q Consensus 136 ~~~~~~~v~I~V~d~Nd~~P~f~ 158 (248)
++++++.|+|+|.|+|||+|.|.
T Consensus 223 ~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 223 EEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp CEEEEEEEEEEEECSSCCSCCCC
T ss_pred cceEEEEEEEEEEEeCCCCCccC
Confidence 89999999999999999999996
No 18
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.3e-33 Score=226.57 Aligned_cols=146 Identities=31% Similarity=0.411 Sum_probs=136.7
Q ss_pred cEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCC
Q psy669 2 IRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDP 81 (248)
Q Consensus 2 i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~ 81 (248)
|+++++||||....|.|+|.|+|+++ .+++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.|.
T Consensus 64 i~~~~~LD~E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~ 140 (210)
T 3mvs_A 64 VWLRQPLDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGA 140 (210)
T ss_dssp EEESSCCCTTTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGG
T ss_pred EEECCccCCcccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCC
Confidence 78899999999999999999999874 467899999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC-CCCCCceEEEEEEEEEecCCCC
Q psy669 82 DQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG-APAPLSSTTRVIISVEDVNDNA 154 (248)
Q Consensus 82 ~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~-~p~~~~~~~~v~I~V~d~Nd~~ 154 (248)
|+.++|+|..+. ++|.|++.+|.| ++.++||||....|.|.|.|+|+| .| ++++++.|+|+|.|+|||+
T Consensus 141 n~~v~Y~i~~~~--~~F~Id~~tG~i-~~~~~LD~E~~~~y~l~V~a~D~g~~~-~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 141 GGSVLYSFQPPS--PFFAIDSARGIV-TVIQELDYEVTQAYQLTVNATDQDKTR-PLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp GGCEEEEESSCC--SSEEECTTTCEE-EECSCCCTTTCSEEEEEEEEEECCSSS-CCEEEEEEEEEEECCCCCC
T ss_pred CceEEEEEeCCC--CCEEEeCCcEEE-EECCcCCCcccceEEEEEEEEECCCCC-CCEEEEEEEEEEEccCCCC
Confidence 999999997654 599999999999 888999999999999999999988 45 8999999999999999985
No 19
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.3e-33 Score=227.06 Aligned_cols=147 Identities=25% Similarity=0.358 Sum_probs=137.7
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLD 80 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~ 80 (248)
+|++.++||||....|.|+|.|+|.+++++++++.|.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.+
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~ 138 (213)
T 3qrb_A 59 WLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDD 138 (213)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCT
T ss_pred EEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCC
Confidence 37789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---CCceEEEEEecCC----CCCcEEEeCCCeEEEEec-CCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEe
Q psy669 81 ---PDQRISYKISAGN----PESYFNIDIGSGLISTTG-RKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 81 ---~~~~i~y~i~~~~----~~~~F~id~~tg~i~~~~-~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d 149 (248)
.|+.++|+|.+++ ..++|.|++.+|.| ++. +.||||....|.|.|.|+|.|.| +++++++|+|+|.|
T Consensus 139 ~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~~LD~E~~~~y~l~V~A~D~g~~-~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 139 VNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVI-SVLTSGLDRESYPTYTLVVQAADLQGE-GLSTTAKAVITVKD 213 (213)
T ss_dssp TTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEE-EECSSCCCTTTCCEEEEEEEEETGGGT-SCEEEEEEEEEEEC
T ss_pred CCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEE-EEccCCCCCccCceEEEEEEEEeCCCC-CceEEEEEEEEEEC
Confidence 7899999998765 34689999999999 554 78999999999999999999999 99999999999987
No 20
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=8.2e-33 Score=220.72 Aligned_cols=144 Identities=32% Similarity=0.463 Sum_probs=134.6
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCC-CCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCC-
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVV-PLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGD- 78 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~-~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D- 78 (248)
+|+++++||||....|.|+|.|+|++.+ ++++++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|
T Consensus 54 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 133 (203)
T 3ppe_A 54 DIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADD 133 (203)
T ss_dssp EEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC
T ss_pred EEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCC
Confidence 3788999999999999999999999876 67889999999999999999999999999999999999999999999999
Q ss_pred --CCCCceEEEEEecCCCCCcEEEeCCCeEEEEec-CCCCccccceeEEEEEEEeC-CCCCCCceEEEEEEEEEe
Q psy669 79 --LDPDQRISYKISAGNPESYFNIDIGSGLISTTG-RKLDRENQAEHVLEVTVTDD-GAPAPLSSTTRVIISVED 149 (248)
Q Consensus 79 --~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~-~~ld~e~~~~~~l~v~a~d~-~~p~~~~~~~~v~I~V~d 149 (248)
.|.|+.++|+|.++++ +|.|+ .+|.| ++. +.||||....|.|.|.|+|. |.| +++++++|+|+|.|
T Consensus 134 ~~~g~n~~i~Y~i~~~~~--~F~I~-~tG~i-~~~~~~LD~E~~~~y~l~V~A~D~~G~p-~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 134 PTVAGHATVTYQIIKGNE--YFTVD-DSGVI-FTARADLDRESQSAYEIIVKAKDALGLT-GESSTATVIIRLTD 203 (203)
T ss_dssp TTSSSTTCEEEEEEESTT--TEEEC-TTSEE-EESCSCCCTTTCSEEEEEEEEEETTCCC-CSSSEEEEEEEEEC
T ss_pred cCCCCceEEEEEEeCCCC--cEEEe-CCeEE-EECCcCCCcccCCEEEEEEEEEeCCCCC-CCeEEEEEEEEEEC
Confidence 4778999999998764 99999 99999 777 89999999999999999998 788 89999999999987
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.7e-33 Score=225.32 Aligned_cols=147 Identities=27% Similarity=0.333 Sum_probs=136.5
Q ss_pred cEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCC--
Q psy669 2 IRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL-- 79 (248)
Q Consensus 2 i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~-- 79 (248)
|+++++||||..+.|.|+|.|+|++++++++++.|.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 60 i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~ 139 (215)
T 2qvi_A 60 LSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPN 139 (215)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTT
T ss_pred EEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCC
Confidence 788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCceEEEEEecCC----CCCcEEEeCCCeEEEEe-cCCCCccccceeEEEEEEEeCCCCC--CCceEEEEEEEEEe
Q psy669 80 DPDQRISYKISAGN----PESYFNIDIGSGLISTT-GRKLDRENQAEHVLEVTVTDDGAPA--PLSSTTRVIISVED 149 (248)
Q Consensus 80 ~~~~~i~y~i~~~~----~~~~F~id~~tg~i~~~-~~~ld~e~~~~~~l~v~a~d~~~p~--~~~~~~~v~I~V~d 149 (248)
+.|+.++|+|..++ ..+.|.|++.+|.| ++ .+.||||....|.|.|.|+|.|.|. +++++++|+|+|.|
T Consensus 140 g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 140 ALNGMLRYRILSQAPSTPSPNMFTINNETGDI-ITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp STTTCCCCEEEECSSCCSSTTCEEECTTTCEE-EECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CCCcEEEEEEecCCCCCCcCCeEEEcCCCcEE-EEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 67999999999876 35799999999999 55 5789999999999999999987652 47899999999986
No 22
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=3.1e-33 Score=225.65 Aligned_cols=147 Identities=26% Similarity=0.338 Sum_probs=136.4
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCC-
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL- 79 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~- 79 (248)
+|+++++||||+...|.|+|.|+|.+++++++++.|.|.|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~ 138 (218)
T 3k5r_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDP 138 (218)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSS
T ss_pred EEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCC
Confidence 3788999999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred -CCCceEEEEEecCCCC----CcEEEeCCCeEEEEec---CCCCccc--cceeEEEEEEEeCC--CCCCCceEEEEEEEE
Q psy669 80 -DPDQRISYKISAGNPE----SYFNIDIGSGLISTTG---RKLDREN--QAEHVLEVTVTDDG--APAPLSSTTRVIISV 147 (248)
Q Consensus 80 -~~~~~i~y~i~~~~~~----~~F~id~~tg~i~~~~---~~ld~e~--~~~~~l~v~a~d~~--~p~~~~~~~~v~I~V 147 (248)
+.|+.++|+|.++.+. ++|.|++.+|.| .+. +.||||. ...|.|.|.|+|.| .| +++++++|+|+|
T Consensus 139 ~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p-~~sst~~v~I~V 216 (218)
T 3k5r_A 139 ATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDI-VTVVSPALLDRETLENPKYELIIEAQDMAGLDV-GLTGTATATIVI 216 (218)
T ss_dssp CGGGGCEEEEEEEEESCCSCSCSEEECTTTCEE-EECSCGGGCCGGGCSCSEEEEEEEEEECSSTTT-TCEEEEEEEEEE
T ss_pred CCCCcEEEEEEecCCCCCCcCCEEEEECCccEE-EEeccCCCCCccccCCCeEEEEEEEEECCCCCC-CeeEEEEEEEEE
Confidence 6699999999976543 689999999999 544 6899999 66999999999998 88 899999999999
Q ss_pred Ee
Q psy669 148 ED 149 (248)
Q Consensus 148 ~d 149 (248)
.|
T Consensus 217 ~D 218 (218)
T 3k5r_A 217 DD 218 (218)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 23
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=6e-34 Score=242.28 Aligned_cols=188 Identities=26% Similarity=0.362 Sum_probs=163.2
Q ss_pred eEEEEECC--CCCCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC
Q psy669 55 YYAQIVEN--QSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG 132 (248)
Q Consensus 55 ~~~~v~E~--~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~ 132 (248)
+.+.|.|+ .+.|+.|+++. +|+|.+ ++.++|+|.++....+|.|++.+|.| ++.+.||||....|.|.|.|+|.+
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~D~~ 81 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDI-HAIKRLDREEKAEYTLTAQAVDFE 81 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTBTTTEEEETTTTEE-EECSCCCTTTCSBCCEEEEEECTT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCCCCcEEEeCCcCEE-EEeccCCcccccEEEEEEEEEECC
Confidence 46778999 78899999985 899987 68899999876556799999999999 888999999999999999999987
Q ss_pred CCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCC----C----------------------
Q psy669 133 APAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTT----G---------------------- 186 (248)
Q Consensus 133 ~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D----~---------------------- 186 (248)
.+.++++++.|+|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+| +
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~t 161 (322)
T 2a62_A 82 TNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPET 161 (322)
T ss_dssp TCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTTT
T ss_pred CCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecCC
Confidence 53256788999999999999999999999999999999999999999999998 2
Q ss_pred -------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEeeeCCcccccC---------CCCcccEEEE
Q psy669 187 -------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWENFHE---------TNITGDFLFR 245 (248)
Q Consensus 187 -------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~---------~~~~g~~~~~ 245 (248)
+.||||....|.|.+.+.+........+++++++|+|.|+|||+|.|.. +...|..++.
T Consensus 162 G~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~ 236 (322)
T 2a62_A 162 AIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGR 236 (322)
T ss_dssp CCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEE
T ss_pred CEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEE
Confidence 4699999999999999888765433467789999999999999999954 4455666653
No 24
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.6e-31 Score=215.03 Aligned_cols=128 Identities=24% Similarity=0.333 Sum_probs=119.6
Q ss_pred EEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCC----CCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeC
Q psy669 56 YAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN----PESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDD 131 (248)
Q Consensus 56 ~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~----~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~ 131 (248)
.++|+||++ |+.++++.|.|.|.+.|+.++|+|.++. +.++|.|++.+|.| ++.++||||....|.|.|.|+|.
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~D~ 83 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQL-SVTKPLDRELIARFHLRAHAVDI 83 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEE-EECSCCCTTTCSEEEEEEEEEET
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEE-EECcccCcccCCeEEEEEEEEEC
Confidence 678999998 8888899999999888999999999753 35799999999999 88899999999999999999999
Q ss_pred CCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC
Q psy669 132 GAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG 186 (248)
Q Consensus 132 ~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~ 186 (248)
|.| ++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.
T Consensus 84 g~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~ 137 (215)
T 2qvi_A 84 NGN-QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADD 137 (215)
T ss_dssp TTC-CCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSC
T ss_pred CCC-ceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 998 889999999999999999999999999999999999999999999999983
No 25
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=2.1e-32 Score=219.11 Aligned_cols=146 Identities=31% Similarity=0.482 Sum_probs=129.0
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECC-CCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHG-VVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDL 79 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~-~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~ 79 (248)
+|+++++||||....|.|+|.|+|++ .+++++++.+.|.|.|+|||+|.|....|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~ 135 (207)
T 3lnd_A 56 DIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADD 135 (207)
T ss_dssp EEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSC
T ss_pred EEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCC
Confidence 37889999999999999999999987 57788999999999999999999999999999999999999999999999998
Q ss_pred ---CCCceEEEEEecCCCCCcEEEeCCCeEEEEec-CCCCccccceeEEEEEEEeCCCC-CCCceEEEEEEEEEe
Q psy669 80 ---DPDQRISYKISAGNPESYFNIDIGSGLISTTG-RKLDRENQAEHVLEVTVTDDGAP-APLSSTTRVIISVED 149 (248)
Q Consensus 80 ---~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~-~~ld~e~~~~~~l~v~a~d~~~p-~~~~~~~~v~I~V~d 149 (248)
|.|+.++|+|..+++ +|.|++.+|.| ++. +.||||....|.|.|.|+|+|.| .+++++++|+|+|.|
T Consensus 136 ~~~g~n~~i~Y~i~~~~~--~F~Id~~tG~i-~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 136 PTYGNSAKVVYSILQGQP--YFSVESETGII-KTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp TTSSSTTCCEEEEEESGG--GEEECTTTCEE-EECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCCCCCcEEEEEEcCCCC--CEEEcCCCcEE-EECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 778899999997754 99999999999 676 89999999999999999998865 268899999999986
No 26
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.97 E-value=9e-31 Score=208.88 Aligned_cols=165 Identities=23% Similarity=0.293 Sum_probs=142.1
Q ss_pred eEEEEECCCCCC--eeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC
Q psy669 55 YYAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG 132 (248)
Q Consensus 55 ~~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~ 132 (248)
..++|+||.+.| ..++++. .|+|.+.+ +|+|.+++..++|.|++.+|.| ++.+.||||....|.|.|.|+|.|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~D~g 79 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDI-YAFERLDREKKAEYELTAHIIDRR 79 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEE-EESSCCCTTTCCEEEEEEEEEETT
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEE-EECccccccccceEEEEEEEEECC
Confidence 468999999988 8888988 99998755 9999988777899999999999 888999999999999999999998
Q ss_pred CCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC--------------------------
Q psy669 133 APAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG-------------------------- 186 (248)
Q Consensus 133 ~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~-------------------------- 186 (248)
.|.++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.
T Consensus 80 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~~tG 159 (203)
T 3ppe_A 80 NNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNEYFTVDDSG 159 (203)
T ss_dssp TTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTTTEEECTTS
T ss_pred CCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCCcEEEeCCe
Confidence 764578899999999999999999999999999999999999999999999992
Q ss_pred ------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEe
Q psy669 187 ------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLF 225 (248)
Q Consensus 187 ------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d 225 (248)
++||||....|.|.+.+.+..+. ...+++++++|+|+|
T Consensus 160 ~i~~~~~~LD~E~~~~y~l~V~A~D~~G~-p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 160 VIFTARADLDRESQSAYEIIVKAKDALGL-TGESSTATVIIRLTD 203 (203)
T ss_dssp EEEESCSCCCTTTCSEEEEEEEEEETTCC-CCSSSEEEEEEEEEC
T ss_pred EEEECCcCCCcccCCEEEEEEEEEeCCCC-CCCeEEEEEEEEEEC
Confidence 46777777778887777665221 235667777777765
No 27
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.97 E-value=7.9e-31 Score=210.85 Aligned_cols=127 Identities=24% Similarity=0.356 Sum_probs=116.7
Q ss_pred eEEEEECCCC--CCeeEEEEEEEeCCCCCCceEEEEEecC----CCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEE
Q psy669 55 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTV 128 (248)
Q Consensus 55 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a 128 (248)
..++|+||.+ .|+.|+++.| |+|. |+.++|+|.++ ++.++|.|++.+|.| ++.++||||....|.|.|.|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a 80 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWL-KVTQPLDREAIAKYILYSHA 80 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCSEEEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEE-EECCccCcccCceEEEEEEE
Confidence 3789999998 5788999999 7775 88999999873 344699999999999 88899999999999999999
Q ss_pred EeCCCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC
Q psy669 129 TDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG 186 (248)
Q Consensus 129 ~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~ 186 (248)
+|.+.| ++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.
T Consensus 81 ~D~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~ 137 (213)
T 3qrb_A 81 VSSNGE-AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADD 137 (213)
T ss_dssp EETTSC-BCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSC
T ss_pred EeCCCC-cccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCC
Confidence 999988 788999999999999999999999999999999999999999999999985
No 28
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.97 E-value=9.5e-32 Score=215.26 Aligned_cols=166 Identities=23% Similarity=0.371 Sum_probs=136.8
Q ss_pred EEEEECCCCCC--eeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCC
Q psy669 56 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGA 133 (248)
Q Consensus 56 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~ 133 (248)
.+.|.||.+.| ..++++ |+|+|.| ++.++|+|.+++..++|.|++.+|.| ++.+.||||....|.|.|.|+|.+.
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~D~~~ 82 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDI-QATKRLDREEKPVYILRAQAVNRRT 82 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEE-EECSCCCGGGCCEEEC----CBSSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEE-EECCCcCcccCCEEEEEEEEEECCC
Confidence 56799998865 578888 8999998 67899999876656799999999999 8889999999999999999999874
Q ss_pred -CCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC--------------------------
Q psy669 134 -PAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG-------------------------- 186 (248)
Q Consensus 134 -p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~-------------------------- 186 (248)
| ++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.
T Consensus 83 ~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~t 161 (207)
T 3lnd_A 83 GR-PVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESET 161 (207)
T ss_dssp CC-CCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGGGEEECTTT
T ss_pred CC-ccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCC
Confidence 5 788899999999999999999999999999999999999999999999982
Q ss_pred -------CCCCccCceEEEEEEccCCCCceeecCCceEEEEEEEEe
Q psy669 187 -------RKLDRENQAEHVLETGSGESEATLETGSGESEATLEVLF 225 (248)
Q Consensus 187 -------~~ld~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d 225 (248)
++||||....|.|.+.+.+........+++++++|+|+|
T Consensus 162 G~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 162 GIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp CEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred cEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 457888888888888777764432345567777777765
No 29
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=195.40 Aligned_cols=116 Identities=31% Similarity=0.478 Sum_probs=109.5
Q ss_pred EEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCC--CCcEEEeCCCeEEEEecCCCC
Q psy669 38 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP--ESYFNIDIGSGLISTTGRKLD 115 (248)
Q Consensus 38 i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~--~~~F~id~~tg~i~~~~~~ld 115 (248)
++|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|.++.. ..+|.|++.+|.| ++.+.||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I-~~~~~LD 80 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWL-SVLHRID 80 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEE-EECSCCC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEE-EECccCC
Confidence 468999999999999999999999999999999999999999999999999987653 3689999999999 8889999
Q ss_pred ccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCC
Q psy669 116 RENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAP 155 (248)
Q Consensus 116 ~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P 155 (248)
||....|.|.|.|+|+|.| ++++++.|+|+|.|+|||+|
T Consensus 81 ~E~~~~y~l~V~A~D~g~p-~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 81 REEVNQLRFTVMARDRGQP-PKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTTCSEEEEEEEECCSBTT-BCCEEEEEEEEEECSTTCCC
T ss_pred cccCCEEEEEEEEEECCCC-CcEEEEEEEEEEEeccCCCC
Confidence 9999999999999999998 89999999999999999998
No 30
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.97 E-value=2.6e-30 Score=208.52 Aligned_cols=139 Identities=22% Similarity=0.271 Sum_probs=120.9
Q ss_pred EEEEECCCCCC--eeEEEEEEEeCCCCCCceEEEEEec----CCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEE
Q psy669 56 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISA----GNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVT 129 (248)
Q Consensus 56 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~ 129 (248)
.++|+||.++| ..++++.|.|+|. .++|+|.+ +++.++|.|++.+|.| ++.+.||||....|.|.|.|+
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~a~ 81 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSV-SVTRTLDRETIATYQLYVETT 81 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCSEEEEEEEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEE-EECCcCCcccCCEEEEEEEEE
Confidence 67899999998 8899999998874 68999974 3445899999999999 888999999999999999999
Q ss_pred eCCCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCCCCCCccCceEEEEEE
Q psy669 130 DDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTGRKLDRENQAEHVLET 201 (248)
Q Consensus 130 d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~~~ld~e~~~~y~~~v 201 (248)
|.+.| ++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|.+. ..+....|+|.-
T Consensus 82 D~g~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~-g~n~~i~Y~i~~ 151 (218)
T 3k5r_A 82 DASGK-TLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPA-TDNALLRYNIRQ 151 (218)
T ss_dssp CSSSC-EEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSC-GGGGCEEEEEEE
T ss_pred ECCCC-ceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCC-CCCcEEEEEEec
Confidence 99988 88899999999999999999999999999999999999999999999999510 123444555544
No 31
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.97 E-value=9.2e-30 Score=216.28 Aligned_cols=145 Identities=30% Similarity=0.382 Sum_probs=128.7
Q ss_pred cEEccCCCCccCcEEEEEEEEEECCC----CCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeC
Q psy669 2 IRTSTILDVETKTHYWLTVFAQDHGV----VPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDG 77 (248)
Q Consensus 2 i~~~~~LD~E~~~~y~l~v~a~D~~~----~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~ 77 (248)
|+++++||||....|.|+|.|+|+|+ +++++++.++|.|.| |||+|.|....|.+.|+|+.++|+.|+++.|+|+
T Consensus 163 i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 241 (316)
T 3ubf_A 163 VRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSF 241 (316)
T ss_dssp EEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECT
T ss_pred EEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeC
Confidence 78899999999999999999999885 457888999999999 9999999999999999999999999999999999
Q ss_pred CCCCCceEEEEEe-cCCCCCcEEEeCCCeEEEEecCCCCcccc---ceeEEEEEEEe-CCCCCCCceEEEEEEEEEecCC
Q psy669 78 DLDPDQRISYKIS-AGNPESYFNIDIGSGLISTTGRKLDRENQ---AEHVLEVTVTD-DGAPAPLSSTTRVIISVEDVND 152 (248)
Q Consensus 78 D~~~~~~i~y~i~-~~~~~~~F~id~~tg~i~~~~~~ld~e~~---~~~~l~v~a~d-~~~p~~~~~~~~v~I~V~d~Nd 152 (248)
| ++.++|+|. .++..++|.|++.+|.| ++.+.||||.. ..|.|.|.|+| .| ++++++.|+|+|.|+||
T Consensus 242 D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i-~~~~~LD~E~~~~~~~y~l~V~A~dd~g---~~~~~~~v~I~V~DvND 314 (316)
T 3ubf_A 242 A---DREIRYTLKAQGQGAGTFNIGPTSGIV-KLAKELDFEDLRQPHVYSLIVTATEDSG---GFSTSVDLTIRVTDVND 314 (316)
T ss_dssp T---CCCEEEEEEEESSCTTTEEECTTTCEE-EECSCCCSSCTTSCSEEEEEEEEEESSS---SCEEEEEEEEEEECC--
T ss_pred C---CCEEEEEEEcCCCCCCeEEEECCeEEE-EECCcCCccccCCCceEEEEEEEEECCC---CCEEEEEEEEEEEecCC
Confidence 8 688999998 56777899999999999 88999999997 78999999995 54 57899999999999999
Q ss_pred CC
Q psy669 153 NA 154 (248)
Q Consensus 153 ~~ 154 (248)
||
T Consensus 315 n~ 316 (316)
T 3ubf_A 315 NA 316 (316)
T ss_dssp --
T ss_pred CC
Confidence 86
No 32
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=9.4e-29 Score=179.28 Aligned_cols=110 Identities=33% Similarity=0.440 Sum_probs=102.0
Q ss_pred EEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCC---CCCcEEEeCCCeEEEEecCCC
Q psy669 38 IQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN---PESYFNIDIGSGLISTTGRKL 114 (248)
Q Consensus 38 i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~---~~~~F~id~~tg~i~~~~~~l 114 (248)
|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..+. ...+|.|++.+|.| ++.++|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I-~~~~~L 80 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLI-TVQRSL 80 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEE-EECSCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEE-EECccC
Confidence 56899999999999999999999999999999999999999999999999998632 34689999999999 888999
Q ss_pred CccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecC
Q psy669 115 DRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVN 151 (248)
Q Consensus 115 d~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~N 151 (248)
|||....|.|.|.|+|+|.| + ++++|+|+|.|+|
T Consensus 81 D~E~~~~y~l~V~A~D~g~~-~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 81 DREETAIHKVTVLASDGSST-P--ARATVTINVTDVN 114 (114)
T ss_dssp CTTTCSEEEEEEEEESSSSS-C--EEEEEEEEEECCC
T ss_pred CcccCcEEEEEEEEEECCCC-c--eEEEEEEEEEECC
Confidence 99999999999999999977 4 7899999999997
No 33
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=3.7e-27 Score=192.38 Aligned_cols=144 Identities=22% Similarity=0.271 Sum_probs=121.0
Q ss_pred ccCCCCccCcEEEEEEEEEECCC--CCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEE-----EEEEeC
Q psy669 5 STILDVETKTHYWLTVFAQDHGV--VPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQ-----LAASDG 77 (248)
Q Consensus 5 ~~~LD~E~~~~y~l~v~a~D~~~--~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~-----v~a~D~ 77 (248)
.+.||||....|.+.+.+.+.+. .+....+.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++ +.|+|+
T Consensus 80 ~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~ 159 (242)
T 4apx_B 80 GRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDI 159 (242)
T ss_dssp TSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECC
T ss_pred CCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccC
Confidence 36899999877655554444322 24566788999999999999999999999999999999999976 779999
Q ss_pred CCCCCceEEEEEecCCCC----CcEEEeC-CCeEEEEecCCCCccccceeEEEEEEEeCCCCC--CCceEEEEEEEEEe
Q psy669 78 DLDPDQRISYKISAGNPE----SYFNIDI-GSGLISTTGRKLDRENQAEHVLEVTVTDDGAPA--PLSSTTRVIISVED 149 (248)
Q Consensus 78 D~~~~~~i~y~i~~~~~~----~~F~id~-~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~--~~~~~~~v~I~V~d 149 (248)
|.|.|+.++|+|..+... +.|.|+. .+|.| ++.+.||||....|.|.|.|+|+|.|. .+++.+.|+|+|..
T Consensus 160 D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i-~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 160 DDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNV-VLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp SSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCE-EECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCCcCCceEEEEecCCCCcccccceEEcCCCceEE-EECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 999999999999976543 4699995 58999 888999999999999999999999872 36778888888864
No 34
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.92 E-value=1.7e-24 Score=176.56 Aligned_cols=170 Identities=18% Similarity=0.200 Sum_probs=129.9
Q ss_pred CceEEEEECCCCCCeeEEEEEE-EeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEe---cCCCCccccceeEEEEEE
Q psy669 53 PVYYAQIVENQSGILPIVQLAA-SDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTT---GRKLDRENQAEHVLEVTV 128 (248)
Q Consensus 53 ~~~~~~v~E~~~~g~~v~~v~a-~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~---~~~ld~e~~~~~~l~v~a 128 (248)
+.+.+.|+|++++|+.+..+.+ .|.|.+.++.++|+|.. +...+|.|++.+|.+ .+ .+.||||....|.+.+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~-~~~~~f~id~~tg~~-~l~~t~~~LDrE~~~~~~~~~~~ 97 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD-NVDYWVLLDPVKQML-FLNSTGRVLDRDPPMNIHSIVVQ 97 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES-CGGGCEEEETTTTEE-EECCTTSCCCCSTTTCCCEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec-CCCceEEECCCCCEE-EEEecCCceeccCCCceEEEEEE
Confidence 4578899999999999876544 44555678899999975 345789999999998 44 367999988777665555
Q ss_pred EeCCCC-CCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEE-----EEEEeCCC----------------
Q psy669 129 TDDGAP-APLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQ-----VSLISTTG---------------- 186 (248)
Q Consensus 129 ~d~~~p-~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~-----v~A~D~D~---------------- 186 (248)
.+.+.+ .+..+.+.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.|++ |.|+|+|.
T Consensus 98 v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~ 177 (242)
T 4apx_B 98 VQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPED 177 (242)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTS
T ss_pred EEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCC
Confidence 543322 14456778999999999999999999999999999999999976 78999984
Q ss_pred --------------------CCCCccCceEEEEEEccCCCCcee-ecCCceEEEEEEEE
Q psy669 187 --------------------RKLDRENQAEHVLETGSGESEATL-ETGSGESEATLEVL 224 (248)
Q Consensus 187 --------------------~~ld~e~~~~y~~~v~~~~~~~~~-~~~~~t~~~~i~v~ 224 (248)
++||||....|.|.+.|.|..... ...+.++.++|.|.
T Consensus 178 ~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe 236 (242)
T 4apx_B 178 PTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLE 236 (242)
T ss_dssp TTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEE
T ss_pred cccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEe
Confidence 568888888888888777764432 22334455555553
No 35
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=9.1e-26 Score=165.62 Aligned_cols=115 Identities=23% Similarity=0.271 Sum_probs=105.6
Q ss_pred cCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecC----CCCCcEEEeCCCeEEEEecCCCCccc
Q psy669 43 VNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGLISTTGRKLDREN 118 (248)
Q Consensus 43 vNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~tg~i~~~~~~ld~e~ 118 (248)
.+.+.|.|....|.+.+.|+.++|+.|++|. +|+|.+.|+.++|+|.++ ...++|.|++.+|.| ++.+.||||.
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~ 82 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGEL-NVTSILDREE 82 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEE-EECSCCBTTT
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEE-EECcccCccc
Confidence 3579999999999999999999999999999 699998899999999875 345799999999999 8899999999
Q ss_pred cceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCeeccC
Q psy669 119 QAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQN 160 (248)
Q Consensus 119 ~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~ 160 (248)
...|.|.|.|+|.|.| ++++++.|.|+|.|+|||+|.|.++
T Consensus 83 ~~~y~l~V~A~D~g~p-~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 83 TPFFLLTGYALDARGN-NVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp BSEEEEEEEEECTTCC-EEEEEECCEEEEECTTCCCCCCCCC
T ss_pred CceEEEEEEEEECCCC-ceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 9999999999999988 8899999999999999999999753
No 36
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.88 E-value=4.9e-23 Score=148.11 Aligned_cols=99 Identities=28% Similarity=0.458 Sum_probs=80.2
Q ss_pred ceEEEEECCCCCCee--EEEEEEEeCCCCCCceEEEEEecC----CCCCcEEEeCCCeEEEEecCCCCccccceeEEEEE
Q psy669 54 VYYAQIVENQSGILP--IVQLAASDGDLDPDQRISYKISAG----NPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVT 127 (248)
Q Consensus 54 ~~~~~v~E~~~~g~~--v~~v~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~ 127 (248)
.|.++|+||+++|+. |+++ |.|.+.|+.++|+|.++ +..++|.|++.+|.| ++.++||||....|.|.|.
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~V~ 81 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQL-SVTKPLDRELIARFHLRAH 81 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCCEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEE-EECCcCCcccCCeEEEEEE
Confidence 468999999999995 5555 67777899999999863 346799999999999 8889999999999999999
Q ss_pred EEeCCCCCCCceEEEEEEEEEecCCCCCee
Q psy669 128 VTDDGAPAPLSSTTRVIISVEDVNDNAPEF 157 (248)
Q Consensus 128 a~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f 157 (248)
|+|.|.| ++++++.|.|+|.|+|||+|+|
T Consensus 82 A~D~g~p-~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 82 AVDINGN-QVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EECTTSC-BCSCCEEEEEEEC---------
T ss_pred EEECCCC-ceeeEEEEEEEEEECCCCCCCC
Confidence 9999998 8999999999999999999998
No 37
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=1.8e-22 Score=148.22 Aligned_cols=107 Identities=23% Similarity=0.281 Sum_probs=92.6
Q ss_pred CCceEEEEECCCCCCeeEEEEEEEeCCCCCCceE---EEEEecCCCCCcEEEeCCCeEEEEecCCCCcccc----ceeEE
Q psy669 52 DPVYYAQIVENQSGILPIVQLAASDGDLDPDQRI---SYKISAGNPESYFNIDIGSGLISTTGRKLDRENQ----AEHVL 124 (248)
Q Consensus 52 ~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i---~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~----~~~~l 124 (248)
...|..+|+|+.++|+.|+++ |+|.|.+. +.+ +|+|.+++...+|.|++.||.| ++.++||||.. ..|.|
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i-~~~~~LDRE~~c~~~~~y~l 86 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNL-LLKEKLDREELCGSTNPCIL 86 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEE-EESSCCCSTTTCTTCSSCCB
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEE-EECccccchhhcccCCcEEE
Confidence 356788999999999999999 99988753 334 8999887777899999999999 88899999998 89999
Q ss_pred EEEEEeCCCCCCCceEEEEEEEEEecCCCCCeeccCeeEEE
Q psy669 125 EVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVN 165 (248)
Q Consensus 125 ~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~ 165 (248)
.+.|.+.. | . ..+.|.|+|.|+|||+|.|.++.|.++
T Consensus 87 ~v~a~~~~-p--~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 87 HFQVLLKS-P--V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCEEEETT-T--T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEECC-C--C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999743 3 3 588999999999999999999988764
No 38
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.82 E-value=8.1e-20 Score=128.43 Aligned_cols=91 Identities=27% Similarity=0.373 Sum_probs=83.3
Q ss_pred eEEEEECCCC--CCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC
Q psy669 55 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG 132 (248)
Q Consensus 55 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~ 132 (248)
+.++|+||.+ .|+.|+++. +|+|.| |+.++|+|.++...+.|.|++.+|.| ++.++||||....|.|.|.|+|.|
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~V~A~D~G 82 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDI-HAIQRLDREERSQYTLRAQALDRR 82 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEE-EECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCE-EECeecCCccCCeEEEEEEEEECC
Confidence 5788999976 589999999 999999 99999999876656789999999999 788999999999999999999999
Q ss_pred C-CCCCceEEEEEEEEEe
Q psy669 133 A-PAPLSSTTRVIISVED 149 (248)
Q Consensus 133 ~-p~~~~~~~~v~I~V~d 149 (248)
. | ++++++.|.|+|.|
T Consensus 83 ~~p-~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 83 TGR-PMEPESEFIIKIQD 99 (99)
T ss_dssp TCC-BSSCCEEEEEEEEC
T ss_pred CCC-CcceeEEEEEEEeC
Confidence 4 8 89999999999986
No 39
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.82 E-value=8.7e-20 Score=128.11 Aligned_cols=91 Identities=29% Similarity=0.379 Sum_probs=81.3
Q ss_pred eEEEEECCCC--CCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC
Q psy669 55 YYAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG 132 (248)
Q Consensus 55 ~~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~ 132 (248)
+.++|+||.+ .|+.|+++. +|+|.| |+.++|+|.++...++|.|++.+|.| ++.++||||....|.|.|.|+|+|
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~A~D~g 81 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDI-HAIKRLDREEKAEYTLTAQAVDFE 81 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEE-EECSCCCTTTCSEEEEEEEEEETT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEE-EECccCCCcCCCeEEEEEEEEECC
Confidence 5789999995 799999997 999999 99999999876556689999999999 888999999999999999999999
Q ss_pred C-CCCCceEEEEEEEEEe
Q psy669 133 A-PAPLSSTTRVIISVED 149 (248)
Q Consensus 133 ~-p~~~~~~~~v~I~V~d 149 (248)
. | ++++++.|.|+|.|
T Consensus 82 ~~~-~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 82 TNK-PLEPPSEFIIKVQD 98 (98)
T ss_dssp TCC-BSSCCEEEEEEECC
T ss_pred CCC-CcceeEEEEEEEEC
Confidence 7 6 78999999999986
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.78 E-value=6.4e-19 Score=124.03 Aligned_cols=89 Identities=26% Similarity=0.269 Sum_probs=81.2
Q ss_pred eEEEEECCCCC--CeeEEEEEEEeCCCCCCceEEEEEec----CCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEE
Q psy669 55 YYAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISA----GNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTV 128 (248)
Q Consensus 55 ~~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a 128 (248)
+.++|+||.++ |+.|++|.|+|+|. .++|+|.+ +++.+.|.|++.+|.| .+.++||||....|.|.|.|
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~V~A 79 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEV-SVTKALDREAIPSYQLQVET 79 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCCEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEE-EECcCCCcccCceEEEEEEE
Confidence 46789999999 99999999999996 68999974 3456799999999999 88999999999999999999
Q ss_pred EeCCCCCCCceEEEEEEEEEe
Q psy669 129 TDDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 129 ~d~~~p~~~~~~~~v~I~V~d 149 (248)
+|+|.| ++++++.|+|+|.|
T Consensus 80 ~D~g~~-~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 80 TDENGK-TIEGPVDLEILVID 99 (99)
T ss_dssp ECTTCC-EEEEEEEEEEEEEC
T ss_pred EECCCC-ceeeEEEEEEEEEC
Confidence 999988 88999999999987
No 41
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=3e-19 Score=130.10 Aligned_cols=85 Identities=20% Similarity=0.301 Sum_probs=77.8
Q ss_pred EEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC---------------------------------CCCCc
Q psy669 145 ISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG---------------------------------RKLDR 191 (248)
Q Consensus 145 I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---------------------------------~~ld~ 191 (248)
++|.|+|||+|.|.+..|.+.|+|++++|+.|++|.|+|+|. ++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999983 67999
Q ss_pred cCceEEEEEEccCCCCceeecCCceEEEEEEEEeeeCCcc
Q psy669 192 ENQAEHVLETGSGESEATLETGSGESEATLEVLFENSTWE 231 (248)
Q Consensus 192 e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~nd~~P 231 (248)
|....|.|.+.+.+... ...+++++++|+|+|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~--p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQ--PPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBT--TBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCC--CCcEEEEEEEEEEEeccCCCC
Confidence 99999999999998754 345779999999999999998
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.77 E-value=3.1e-18 Score=120.55 Aligned_cols=88 Identities=33% Similarity=0.374 Sum_probs=80.0
Q ss_pred EEEEECCCCCC--eeEEEEEEEeCCCCCCceEEEEEec----CCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEE
Q psy669 56 YAQIVENQSGI--LPIVQLAASDGDLDPDQRISYKISA----GNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVT 129 (248)
Q Consensus 56 ~~~v~E~~~~g--~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~ 129 (248)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+ +++.+.|.|++.+|.| .+.++||||....|.|.|.|+
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~v~A~ 80 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDV-SVTRPLDREAIANYELEVEVT 80 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCCEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEE-EECcccCCccCCEEEEEEEEE
Confidence 46899999986 8899999999996 79999985 2345799999999999 889999999999999999999
Q ss_pred eCCCCCCCceEEEEEEEEEe
Q psy669 130 DDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 130 d~~~p~~~~~~~~v~I~V~d 149 (248)
|.|.| ++++.+.|.|+|.|
T Consensus 81 D~g~~-~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 81 DLSGK-IIDGPVRLDISVID 99 (99)
T ss_dssp ETTSC-EEEEEEEEEEEEEC
T ss_pred ECCCC-ceeeeEEEEEEEEC
Confidence 99998 89999999999987
No 43
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.77 E-value=2.1e-18 Score=121.56 Aligned_cols=88 Identities=26% Similarity=0.323 Sum_probs=80.1
Q ss_pred EEEEECCCCC--CeeEEEEEEEeCCCCCCceEEEEEec----CCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEE
Q psy669 56 YAQIVENQSG--ILPIVQLAASDGDLDPDQRISYKISA----GNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVT 129 (248)
Q Consensus 56 ~~~v~E~~~~--g~~v~~v~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~ 129 (248)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+ +++.+.|.|++.||.| .+.++||||....|.|.|.|+
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i-~~~~~LDrE~~~~y~l~V~A~ 81 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSV-SVTRTLDRETIATYQLYVETT 81 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCSEEEEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEE-EECcccCCcCCCEEEEEEEEE
Confidence 6789999998 89999999999996 58999975 2345799999999999 889999999999999999999
Q ss_pred eCCCCCCCceEEEEEEEEEe
Q psy669 130 DDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 130 d~~~p~~~~~~~~v~I~V~d 149 (248)
|.|.| ++++.+.|.|+|.|
T Consensus 82 D~g~p-~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 82 DASGK-TLEGPVPLEVIVID 100 (100)
T ss_dssp CTTCC-EEEEEEEEEEEEEC
T ss_pred ECCCC-cccceEEEEEEEEC
Confidence 99998 89999999999987
No 44
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.75 E-value=3.2e-18 Score=121.70 Aligned_cols=90 Identities=21% Similarity=0.286 Sum_probs=79.1
Q ss_pred EEEEECCCC--CCeeEEEEEEEeCCCCCCceEEEEEecCCC----CCcEEEeCCCeEEEEecCCCCccccceeEEEEEEE
Q psy669 56 YAQIVENQS--GILPIVQLAASDGDLDPDQRISYKISAGNP----ESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVT 129 (248)
Q Consensus 56 ~~~v~E~~~--~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~----~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~ 129 (248)
.++|+||.+ .|..|+++.| | .+.|+.++|+|.+++. .++|.|++.+|.| ++.++||||....|.|.|.|+
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I-~~~~~LDrE~~~~y~l~V~A~ 85 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWL-KVTEPLDRERIATYTLFSHAV 85 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEE-EECSCCCTTTCCEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEE-EECccCCcCCCCeEEEEEEEE
Confidence 468999998 4789999999 3 3469999999987543 4689999999999 888999999999999999999
Q ss_pred eCCCCCCCceEEEEEEEEEec
Q psy669 130 DDGAPAPLSSTTRVIISVEDV 150 (248)
Q Consensus 130 d~~~p~~~~~~~~v~I~V~d~ 150 (248)
|.|.| ++++++.|.|.|.|+
T Consensus 86 D~g~p-~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 86 SSNGN-AVEDPMEILITVTDQ 105 (105)
T ss_dssp CTTSC-BSSCCEEEEEEEEC-
T ss_pred ECCCC-ceeeEEEEEEEEEeC
Confidence 99999 899999999999985
No 45
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=8.5e-17 Score=116.12 Aligned_cols=79 Identities=28% Similarity=0.320 Sum_probs=71.7
Q ss_pred EEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEEeCCC----------------------------------CCCC
Q psy669 145 ISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLISTTG----------------------------------RKLD 190 (248)
Q Consensus 145 I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~----------------------------------~~ld 190 (248)
|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|. ++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 468999999999999999999999999999999999999993 6799
Q ss_pred ccCceEEEEEEccCCCCceeecCCceEEEEEEEEeee
Q psy669 191 RENQAEHVLETGSGESEATLETGSGESEATLEVLFEN 227 (248)
Q Consensus 191 ~e~~~~y~~~v~~~~~~~~~~~~~~t~~~~i~v~d~n 227 (248)
||....|.|.+.+.+.... +++++++|+|+|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~----~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSST----PARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSS----CEEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCC----ceEEEEEEEEEECC
Confidence 9999999999999887542 36889999999987
No 46
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.62 E-value=1.2e-16 Score=113.17 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=76.2
Q ss_pred CceEEEEECCCCCCeeEEEEEEEeCCCCCC--ceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccc----eeEEEE
Q psy669 53 PVYYAQIVENQSGILPIVQLAASDGDLDPD--QRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQA----EHVLEV 126 (248)
Q Consensus 53 ~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~--~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~----~~~l~v 126 (248)
..+..+|+|++++|+.|++| |.|+|...+ +.++|+|.+++...+|.|++.||.| ++.++||||... .|.+.+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i-~~~~~LDRE~~~~~~~~~~~~~ 80 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGIL-FVNSRIDREELCGRSAECSIHL 80 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEE-EECSCCSHHHHCSSSSSCEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEE-EECCcCccccccCCCCcEEEEE
Confidence 45788999999999999999 999886422 3579999887778899999999999 888899999752 344444
Q ss_pred EEEeCCCCCCCceEEEEEEEEEecCCC
Q psy669 127 TVTDDGAPAPLSSTTRVIISVEDVNDN 153 (248)
Q Consensus 127 ~a~d~~~p~~~~~~~~v~I~V~d~Nd~ 153 (248)
.+... .| . ..+.|.|+|.|+|||
T Consensus 81 ~v~~~-~p--~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 81 EVIVD-RP--L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEET-TT--T-EEEEEEEEEECCSCC
T ss_pred EEEEC-CC--C-EEEEEEEEEEEcCCC
Confidence 54443 34 3 488999999999997
No 47
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.39 E-value=3.1e-13 Score=98.61 Aligned_cols=53 Identities=26% Similarity=0.394 Sum_probs=49.7
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCC
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDP 53 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~ 53 (248)
+|+++++||||....|.|+|.|+|+|.+++++++.|.|.|.|+|||+|.|.++
T Consensus 71 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 71 ELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp EEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred EEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 37889999999999999999999999999999999999999999999999763
No 48
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.38 E-value=3.4e-13 Score=96.48 Aligned_cols=50 Identities=26% Similarity=0.318 Sum_probs=39.0
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCcc
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMT 50 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f 50 (248)
+|+++++||||+.+.|.|+|.|+|+|.|++++++.|.|.|.|+|||+|.|
T Consensus 61 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 61 QLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 37889999999999999999999999999999999999999999999998
No 49
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.22 E-value=1.4e-12 Score=95.33 Aligned_cols=76 Identities=14% Similarity=0.056 Sum_probs=62.0
Q ss_pred CeeEEEecCCCCCCeeEEEEEEEeCCC---------------------------------CCCCccCc----eEEEEEEc
Q psy669 160 NFYHVNIPETRHRDEPLSQVSLISTTG---------------------------------RKLDRENQ----AEHVLETG 202 (248)
Q Consensus 160 ~~y~~~v~E~~~~g~~v~~v~A~D~D~---------------------------------~~ld~e~~----~~y~~~v~ 202 (248)
..|.++|+|++++|+.|++| |+|+|. ++||||.. ..|.|.+.
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~ 89 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQ 89 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCE
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEE
Confidence 46788999999999999999 898873 67999998 88888776
Q ss_pred cCCCCceeecCCceEEEEEEEEeeeCCcccccCCCCccc
Q psy669 203 SGESEATLETGSGESEATLEVLFENSTWENFHETNITGD 241 (248)
Q Consensus 203 ~~~~~~~~~~~~~t~~~~i~v~d~nd~~P~f~~~~~~g~ 241 (248)
+... .....++++|+|+|+|||+|.|..+.|..+
T Consensus 90 a~~~-----~p~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 90 VLLK-----SPVQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEET-----TTTEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEC-----CCCeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 5532 123478899999999999999999988654
No 50
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=98.80 E-value=5.4e-09 Score=73.75 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=40.0
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEec
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNV 43 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~Dv 43 (248)
+|+++++||||+++.|.|+|+|+|.|.|++++++.|.|.|.|+
T Consensus 63 ~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 63 WLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 3789999999999999999999999999999999999999986
No 51
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=98.72 E-value=1.6e-08 Score=70.63 Aligned_cols=42 Identities=24% Similarity=0.236 Sum_probs=39.7
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEe
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQN 42 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~D 42 (248)
+|++.++||||+.+.|.|+|+|+|.|+|++++.++|.|.|.|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 59 SVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 378899999999999999999999999999999999999987
No 52
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=98.72 E-value=1.9e-08 Score=70.07 Aligned_cols=42 Identities=26% Similarity=0.420 Sum_probs=39.0
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECC-CCCCeeeEEEEEEEEe
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHG-VVPLHARTDVYIQVQN 42 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~-~~~~~~~~~v~i~V~D 42 (248)
+|++.++||||+++.|.|+|.|+|.| +|++++.+.|.|.|.|
T Consensus 57 ~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 57 DIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred CEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 37889999999999999999999999 5899999999999987
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=98.71 E-value=2.1e-08 Score=69.95 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=39.7
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEe
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQN 42 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~D 42 (248)
+|+++++||||+.+.|.|+|+|+|.|++++++.++|.|.|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 58 DVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 378999999999999999999999999999999999999987
No 54
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=98.69 E-value=2.2e-08 Score=69.82 Aligned_cols=42 Identities=24% Similarity=0.286 Sum_probs=39.6
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEe
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQN 42 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~D 42 (248)
+|+++++||||+.+.|.|+|.|+|+|++++++.+.|.|.|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 58 EVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 378999999999999999999999999999999999999987
No 55
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=98.67 E-value=2.6e-08 Score=69.29 Aligned_cols=42 Identities=36% Similarity=0.460 Sum_probs=38.8
Q ss_pred CcEEccCCCCccCcEEEEEEEEEECCC-CCCeeeEEEEEEEEe
Q psy669 1 NIRTSTILDVETKTHYWLTVFAQDHGV-VPLHARTDVYIQVQN 42 (248)
Q Consensus 1 ~i~~~~~LD~E~~~~y~l~v~a~D~~~-~~~~~~~~v~i~V~D 42 (248)
+|++.++||||+++.|.|+|.|+|+|. |++++++.|.|.|.|
T Consensus 56 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 56 DIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 378899999999999999999999997 789999999999986
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.37 E-value=1.2e-07 Score=66.60 Aligned_cols=62 Identities=19% Similarity=0.145 Sum_probs=49.2
Q ss_pred CeeEEEecCCCCCCeeEEEEEEEeCCC---------------------------------CCCCccCce------EEEEE
Q psy669 160 NFYHVNIPETRHRDEPLSQVSLISTTG---------------------------------RKLDRENQA------EHVLE 200 (248)
Q Consensus 160 ~~y~~~v~E~~~~g~~v~~v~A~D~D~---------------------------------~~ld~e~~~------~y~~~ 200 (248)
..|.++|+|++++|+.|++| |.|.|. ++||||... .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 45788999999999999999 998762 679999763 67777
Q ss_pred EccCCCCceeecCCceEEEEEEEEeeeCC
Q psy669 201 TGSGESEATLETGSGESEATLEVLFENST 229 (248)
Q Consensus 201 v~~~~~~~~~~~~~~t~~~~i~v~d~nd~ 229 (248)
+.+.+. ....++.|+|+|+|||
T Consensus 82 v~~~~p-------~~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIVDRP-------LQVFHVEVEVRDINDN 103 (103)
T ss_dssp EEETTT-------TEEEEEEEEEECCSCC
T ss_pred EEECCC-------CEEEEEEEEEEEcCCC
Confidence 755321 1378999999999998
No 57
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=92.56 E-value=0.77 Score=39.81 Aligned_cols=67 Identities=24% Similarity=0.311 Sum_probs=44.5
Q ss_pred EeCCCCCCceEEEEEecCCCC----CcEEEe-CCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEE
Q psy669 75 SDGDLDPDQRISYKISAGNPE----SYFNID-IGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISV 147 (248)
Q Consensus 75 ~D~D~~~~~~i~y~i~~~~~~----~~F~id-~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V 147 (248)
+|+| +..++|+-..-... ....|. ..+..+ ...-+-+ .....|.|.++++|.+.| ++++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~-sft~P~~-~~~~tl~f~LtVTD~~~p-~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASA-NVQIPSN-AGGKDIHILLTLRDNGSP-NLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEE-EEECCTT-CTTCEEEEEEEEEECSSS-CCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceE-EEEeCCC-CCCcEEEEEEEEEeCCCC-CccEEeEEEEEe
Confidence 3777 46688877532211 245564 444555 3332322 356789999999999998 889999998887
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=91.72 E-value=1.5 Score=32.50 Aligned_cols=80 Identities=15% Similarity=0.192 Sum_probs=58.4
Q ss_pred CCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEE
Q psy669 45 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVL 124 (248)
Q Consensus 45 Dn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l 124 (248)
...|-|....|...++-+...|..+++|.-.|... +..+.|...+. ..|.|+.+ |.| .+.+.+-.- ...-.+
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssDp---~dFkV~~D-GtV-ya~r~v~L~-~~~~~F 102 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEP---ADFKVDED-GTV-YAVRSFPLT-AEQAKF 102 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCS---SEEEEETT-TEE-EEESCCSCS-SSCEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEcCCC---CCeEEeCC-CcE-EEecceeec-CCCcEE
Confidence 36799999999878888888899999998887753 56677766422 26999988 778 566654322 223478
Q ss_pred EEEEEeCC
Q psy669 125 EVTVTDDG 132 (248)
Q Consensus 125 ~v~a~d~~ 132 (248)
.|.|.|..
T Consensus 103 ~V~a~D~~ 110 (159)
T 1op4_A 103 LIYAQDKE 110 (159)
T ss_dssp EEEEEETT
T ss_pred EEEEEcCC
Confidence 89999954
No 59
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=87.92 E-value=10 Score=31.10 Aligned_cols=129 Identities=17% Similarity=0.113 Sum_probs=62.9
Q ss_pred CCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCCC--CcEEEeCCCeEEEEe---------cC
Q psy669 44 NDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNPE--SYFNIDIGSGLISTT---------GR 112 (248)
Q Consensus 44 NDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~~--~~F~id~~tg~i~~~---------~~ 112 (248)
+|++..|....-...|.|+. |+.-..|.-.. +......+.|....|... .-|. +.+|.+... -.
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45666666666677889986 44444444332 333345688887765432 1121 122333111 01
Q ss_pred CCC---ccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCCeeccCeeEEEecCCCCCCeeEEEEEEE
Q psy669 113 KLD---RENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAPEFEQNFYHVNIPETRHRDEPLSQVSLI 182 (248)
Q Consensus 113 ~ld---~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~~~~g~~v~~v~A~ 182 (248)
.+| +|....|.+.+..-..+. .+......+|.|.| ||++|.|.-..-...+.|+. |...++|.-.
T Consensus 81 I~dD~~~E~dEtF~v~Ls~p~~~a--~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs 148 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRLFNPSEGV--KLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRY 148 (298)
T ss_dssp BCCCSSCCCCEEEEEEEECCCTTC--CBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEE
T ss_pred EeCCCCccCcEEEEEEEeCCCCCc--EECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEE
Confidence 122 344555555544322121 22223345566666 57789876555477888974 5555555443
No 60
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=85.21 E-value=10 Score=28.65 Aligned_cols=117 Identities=18% Similarity=0.116 Sum_probs=61.5
Q ss_pred CcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCC---CC-eeEEEEEEEeCCCCCCceEEEE
Q psy669 13 KTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQS---GI-LPIVQLAASDGDLDPDQRISYK 88 (248)
Q Consensus 13 ~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~---~g-~~v~~v~a~D~D~~~~~~i~y~ 88 (248)
...|.|+++|.|..+.. .....+.|+|.+ ..+|.- .+..+.+.. .| ..-....|.|.|. .=.++.|.
T Consensus 60 ~G~htlta~A~D~aGn~-s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~ 130 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRR-IESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDFL 130 (190)
T ss_dssp SEEEEEEEEEEETTSCE-EECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEE
T ss_pred CccEEEEEEEEECCCCE-eeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEE
Confidence 45799999999977432 223456777766 356643 233343322 23 3445667777652 12344454
Q ss_pred EecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEe
Q psy669 89 ISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 89 i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d 149 (248)
+. |. +..-+.....- .... . ....|.|++.|+|...- .+....|.|.|.+
T Consensus 131 ~d-g~---~v~t~t~~~y~-~~~~-~---~~G~~tl~a~A~D~aGn--~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 131 VD-GE---VIGSDREAPYE-YEWK-A---VEGNHEISVIAYDDDDA--ASTPDSVKIFVKQ 180 (190)
T ss_dssp ET-TE---EEEEECSSSEE-EEEE-C---CSEEEEEEEEEEETTCC--BCCCEEEEEEEBC
T ss_pred EC-CE---EEecccCCCEE-EEEe-c---CCeeEEEEEEEEECCCC--EEecceEEEEECC
Confidence 42 11 22222211111 1111 1 46789999999996532 2345567777654
No 61
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.53 E-value=4.5 Score=27.34 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=26.3
Q ss_pred cCcEEEEEEEEEECCCCCCeeeEEEEEEEEecC
Q psy669 12 TKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVN 44 (248)
Q Consensus 12 ~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvN 44 (248)
....|.|++.++|.. +.+++.++.|+|...+
T Consensus 67 ~~G~y~f~LTVtD~~--G~s~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER--NLQSQSSVNVIVKEES 97 (102)
T ss_dssp CSSEEEEEEEEEBTT--CCEEEEEEEEEEECCS
T ss_pred CCeEEEEEEEEEeCC--CCEEEeEEEEEEcCCC
Confidence 456799999999987 5788899999998876
No 62
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.60 E-value=4.1 Score=27.55 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=27.0
Q ss_pred ccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCC
Q psy669 118 NQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVND 152 (248)
Q Consensus 118 ~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd 152 (248)
....|.|++.++|.. +.+++..++|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~---G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDER---NLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTT---CCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCC---CCEEEeEEEEEEcCCCC
Confidence 467899999999986 67888999999987754
No 63
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=79.50 E-value=24 Score=28.81 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=41.8
Q ss_pred CccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEE
Q psy669 10 VETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKI 89 (248)
Q Consensus 10 ~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i 89 (248)
+|....|.|.+..-. ++..+......+|+|.| ||++|.|....-...|.|+. |.....|.-...- ...-.+.|+.
T Consensus 87 ~E~dEtF~v~Ls~p~-~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~-~g~vtV~~~T 161 (298)
T 3rb5_A 87 FEEDECFYIRLFNPS-EGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGA-RGTVIVPYWT 161 (298)
T ss_dssp CCCCEEEEEEEECCC-TTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCC-CSCEEEEEEE
T ss_pred ccCcEEEEEEEeCCC-CCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecC-CCCEEEEEEe
Confidence 455555666554321 12223333455666666 56788776655567788875 5555555444322 1133566765
Q ss_pred ecC
Q psy669 90 SAG 92 (248)
Q Consensus 90 ~~~ 92 (248)
..|
T Consensus 162 ~dG 164 (298)
T 3rb5_A 162 END 164 (298)
T ss_dssp EEC
T ss_pred cCC
Confidence 544
No 64
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=75.92 E-value=11 Score=25.54 Aligned_cols=43 Identities=16% Similarity=0.155 Sum_probs=34.0
Q ss_pred cEEccCCCCccCcEEEEEEEEEECCCCCCeeeEEEEEEEEecCCC
Q psy669 2 IRTSTILDVETKTHYWLTVFAQDHGVVPLHARTDVYIQVQNVNDN 46 (248)
Q Consensus 2 i~~~~~LD~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~DvNDn 46 (248)
|.+...+|..+...|.++-.+.|.. +...+++.+|+|.+....
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~--Gn~~t~trtVtV~~~~e~ 89 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSK--GHEVTAKQTVTVKVREEV 89 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTT--SCEEEEEEEEEEECSSCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCC--CCEEEEEEEEEEeCCCcc
Confidence 4566778888889999999999977 456778888888776544
No 65
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=74.55 E-value=7.1 Score=26.55 Aligned_cols=42 Identities=21% Similarity=0.223 Sum_probs=32.9
Q ss_pred cCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEecCCCCC
Q psy669 111 GRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVEDVNDNAP 155 (248)
Q Consensus 111 ~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d~Nd~~P 155 (248)
....|......|.++..++|.. +..++++.+|.|.+..+..|
T Consensus 50 ~g~Vdt~k~G~Y~VtY~VtDs~---Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 50 DGEVDTTKAGTYVLTYTVTDSK---GHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp ESCCCSSSCEEEEEEEEEECTT---SCEEEEEEEEEEECSSCCCC
T ss_pred eCcccCCCceEEEEEEEEEcCC---CCEEEEEEEEEEeCCCcccC
Confidence 3567777888999999999976 56778889999987655443
No 66
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=72.17 E-value=23 Score=25.08 Aligned_cols=46 Identities=15% Similarity=0.079 Sum_probs=24.7
Q ss_pred CCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCC
Q psy669 45 DNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGN 93 (248)
Q Consensus 45 Dn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~ 93 (248)
|+.+.+....-...|.|+. |+.-..|.-.. +......+.|+...|.
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gT 47 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGT 47 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSS
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCC
Confidence 4455444444566788875 45545554432 3333456888877654
No 67
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=67.70 E-value=12 Score=24.08 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=23.9
Q ss_pred CccccceeEEEEEEEeCCCCCCCceEEEEEEEEE
Q psy669 115 DRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVE 148 (248)
Q Consensus 115 d~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~ 148 (248)
-|.....|.+++.++|.. +.+++..+.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~---G~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDK---GATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETT---SCEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECC---CCEEEEEEEEEEc
Confidence 355678899999999976 4566777777775
No 68
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=66.35 E-value=16 Score=23.47 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=22.2
Q ss_pred CccCcEEEEEEEEEECCCCCCeeeEEEEEEEE
Q psy669 10 VETKTHYWLTVFAQDHGVVPLHARTDVYIQVQ 41 (248)
Q Consensus 10 ~E~~~~y~l~v~a~D~~~~~~~~~~~v~i~V~ 41 (248)
|.+...|.+++.++|.. +.+.+.++.|+|.
T Consensus 55 y~~~G~Y~v~LtVtd~~--G~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDK--GATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETT--SCEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECC--CCEEEEEEEEEEc
Confidence 45566799999999977 4556677777764
No 69
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=48.47 E-value=74 Score=25.10 Aligned_cols=64 Identities=25% Similarity=0.310 Sum_probs=40.7
Q ss_pred EEEEEec--CC-CCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCC---CCCCCceEEEEEEEEE--ecCC
Q psy669 85 ISYKISA--GN-PESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDG---APAPLSSTTRVIISVE--DVND 152 (248)
Q Consensus 85 i~y~i~~--~~-~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~---~p~~~~~~~~v~I~V~--d~Nd 152 (248)
.+|++.. +. -..|...|+.++.+ ...+++.. ...|.+.|.|++.+ .. ....+..+.|.|. |.|+
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~Tf--sG~P~~~D-~G~~~i~VtA~~~~~~g~~-~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHIL--EGLPLDTD-KGVHYISVSAARLGANGSH-VPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEE--EECCCGGG-CEEEEEEEEEEEECTTSCE-EEEEEEEEEEEEESSCCC-
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeE--EeccCCCC-cceEEEEEEEeeccCCCCc-cccccceEEEEEecCCCcc
Confidence 3555542 22 24789999999976 44566554 45699999998653 22 2334566778888 6666
No 70
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=44.65 E-value=96 Score=23.15 Aligned_cols=59 Identities=8% Similarity=0.009 Sum_probs=34.7
Q ss_pred ccceeEEEEEEEeCCCCCCCce-EEEEEEEEEecCCCCCeeccCeeEEEecCC-C---CCCeeEEEEEEEeCCC
Q psy669 118 NQAEHVLEVTVTDDGAPAPLSS-TTRVIISVEDVNDNAPEFEQNFYHVNIPET-R---HRDEPLSQVSLISTTG 186 (248)
Q Consensus 118 ~~~~~~l~v~a~d~~~p~~~~~-~~~v~I~V~d~Nd~~P~f~~~~y~~~v~E~-~---~~g~~v~~v~A~D~D~ 186 (248)
....|.|.+.|+|.. +..+ ...+.|.|.+ ..+|... +.-+.+ . ..+.+-++..|.|.|+
T Consensus 59 ~~G~htlta~A~D~a---Gn~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g 122 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSD---GRRIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDG 122 (190)
T ss_dssp CSEEEEEEEEEEETT---SCEEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSS
T ss_pred CCccEEEEEEEEECC---CCEeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCC
Confidence 456799999999965 2222 2346777765 4477642 222332 1 1234556777888764
No 71
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=37.41 E-value=1.2e+02 Score=22.10 Aligned_cols=59 Identities=15% Similarity=0.123 Sum_probs=28.0
Q ss_pred eEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEEEEeCCCCCCceEEEEEecCCC
Q psy669 33 RTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLAASDGDLDPDQRISYKISAGNP 94 (248)
Q Consensus 33 ~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~a~D~D~~~~~~i~y~i~~~~~ 94 (248)
.+.+.+.|.|- |..+.|....-...|.|+. |..-.+|.-...+.+....+.|+...|..
T Consensus 9 ~~~~~~~i~dd-d~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 9 SAALEVLFQGP-GPVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred cceEEEEEecC-CCccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 44566666664 4566655555567788985 55555554443443334568898876553
No 72
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=36.93 E-value=1.1e+02 Score=21.80 Aligned_cols=8 Identities=0% Similarity=0.040 Sum_probs=3.7
Q ss_pred eeEEEEEE
Q psy669 121 EHVLEVTV 128 (248)
Q Consensus 121 ~~~l~v~a 128 (248)
.|.+.+.+
T Consensus 25 ~Fsf~L~~ 32 (141)
T 3klq_A 25 PFSVALES 32 (141)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEe
Confidence 34444443
No 73
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=33.58 E-value=1.9e+02 Score=23.36 Aligned_cols=125 Identities=13% Similarity=0.126 Sum_probs=0.0
Q ss_pred CccCcEEEEEEEEEE----------------CCCCCCeeeEEEEEEEEecCCCCCccCCCceEEEEECCCCCCeeEEEEE
Q psy669 10 VETKTHYWLTVFAQD----------------HGVVPLHARTDVYIQVQNVNDNVPMTLDPVYYAQIVENQSGILPIVQLA 73 (248)
Q Consensus 10 ~E~~~~y~l~v~a~D----------------~~~~~~~~~~~v~i~V~DvNDn~P~f~~~~~~~~v~E~~~~g~~v~~v~ 73 (248)
+|....|.+.+..-. .....+......+|+|.|- |++|.|....-...|.|+ .|.....|.
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~Dd-D~agv~sf~~~~~~V~E~--~G~~~v~V~ 164 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDD-DHAGIFTFEEPVTHVSES--IGIMEVKVL 164 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECC-CCCCEEEESCSEEEEESC--SSEEEEEEE
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEccc-ccccccccCCCeEEEecC--CCeEEEEEE
Q ss_pred EEeCCCCCCceEEEEEecCCCCCc-EEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEE
Q psy669 74 ASDGDLDPDQRISYKISAGNPESY-FNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVII 145 (248)
Q Consensus 74 a~D~D~~~~~~i~y~i~~~~~~~~-F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I 145 (248)
-...-.+ .-.+.|....+....- -.....+|.|......- .-.+.|...|...+ -...+-.|.+
T Consensus 165 Rs~~~~g-~VtV~y~T~~GTA~~g~~DY~~~sgtLtF~~Get------~kti~V~IidD~~~-E~dEtF~V~L 229 (295)
T 3us9_A 165 RTSGARG-NVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEI------VKTISVKVIDDEEY-EKNKTFFLEI 229 (295)
T ss_dssp EESCCCS-CEEEEEEEECCSSCTTTTSEECCEEEEEECTTCC------CEEEEEEECCCSCC-CSCEEEEEEE
T ss_pred EEcCCCc-cEEEEEEecCCCccCCcccccccceEEEecCCce------EEEEEEEEcCCCCc-CCceEEEEEE
No 74
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=32.58 E-value=1.3e+02 Score=27.47 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=45.2
Q ss_pred EEEEEEeCCCCCCceEEEEEecCCCCCcEEEeCCCeEEEEecCCCCccccceeEEEEEEEeCCCCCCCceEEEEEEEEEe
Q psy669 70 VQLAASDGDLDPDQRISYKISAGNPESYFNIDIGSGLISTTGRKLDRENQAEHVLEVTVTDDGAPAPLSSTTRVIISVED 149 (248)
Q Consensus 70 ~~v~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~tg~i~~~~~~ld~e~~~~~~l~v~a~d~~~p~~~~~~~~v~I~V~d 149 (248)
..+.|.+--.+...+..|+|.+ -...+..+......+ .- ..| ....|.|.|.|++.... -....+.+.|+|.
T Consensus 676 i~f~~l~y~~~~~~~y~Y~L~G-~d~~W~~~~~~~~~~-~y-tnL---~pG~Y~f~V~a~~~~g~-w~~~~~~l~I~I~- 747 (758)
T 3ott_A 676 FELSDLPYSLDEKNKFVYRLEG-MDKEWNFLKSNINRI-TY-SNL---SYGNYQLIISKLERDGQ-PSNRPHILNIRIL- 747 (758)
T ss_dssp EEEECCCTTCSSCCCEEEEEET-TCSSCEECCTTCCEE-EE-CSC---CSEEEEEEEEEBCTTSC-BCSSCEEEEEEEC-
T ss_pred EEEEcccCCCCccCeEEEEecC-CCCCccCCCCCcceE-Ee-cCC---CCccEEEEEEEeCCCCC-ccCccEEEEEEEC-
Confidence 3445555444445678888864 334455554333344 21 234 46789999999986532 1233567888885
Q ss_pred cCCCCCeecc
Q psy669 150 VNDNAPEFEQ 159 (248)
Q Consensus 150 ~Nd~~P~f~~ 159 (248)
||...+
T Consensus 748 ----Pp~~~~ 753 (758)
T 3ott_A 748 ----PPWLEH 753 (758)
T ss_dssp ----CGGGGG
T ss_pred ----Ccchhh
Confidence 666543
No 75
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=26.89 E-value=1.8e+02 Score=21.06 Aligned_cols=25 Identities=8% Similarity=0.194 Sum_probs=16.3
Q ss_pred cccceeEEEEEEEeCCCCCCCceEE
Q psy669 117 ENQAEHVLEVTVTDDGAPAPLSSTT 141 (248)
Q Consensus 117 e~~~~~~l~v~a~d~~~p~~~~~~~ 141 (248)
+....|.+.|.|......++.+...
T Consensus 174 ~p~t~Y~~~V~A~n~~G~g~~S~~v 198 (211)
T 3p4l_A 174 TLDTPYYFKIQARNSKGMGPMSEAV 198 (211)
T ss_dssp CTTCEEEEEEEEEETTEECCCCCCE
T ss_pred CCCCEEEEEEEEEcCCccCCCCCCE
Confidence 3466799999999864442444433
Done!