Query psy67
Match_columns 526
No_of_seqs 245 out of 592
Neff 4.0
Searched_HMMs 46136
Date Sat Aug 17 00:46:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy67.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/67hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3537|consensus 100.0 5.5E-83 1.2E-87 659.7 23.3 310 60-469 1-334 (543)
2 cd01268 Numb Numb Phosphotyros 100.0 5E-40 1.1E-44 300.3 17.2 118 197-314 21-138 (138)
3 cd01274 AIDA-1b AIDA-1b Phosph 100.0 1.8E-31 3.9E-36 240.4 15.3 119 191-310 3-125 (127)
4 cd01267 CED6_AIDA1b Phosphotyr 100.0 3.3E-30 7.1E-35 230.9 15.6 128 166-310 2-130 (132)
5 cd01273 CED-6 CED-6 Phosphotyr 100.0 4.6E-30 1E-34 234.0 16.4 129 166-310 9-139 (142)
6 cd01270 DYC-1 DYC-1 (DYB-1 bin 100.0 2.7E-30 5.8E-35 236.9 14.7 121 165-309 2-139 (140)
7 cd01215 Dab Disabled (Dab) Pho 100.0 1.6E-29 3.4E-34 231.6 13.2 117 193-313 16-138 (139)
8 cd01216 Fe65 Fe65 Phosphotyros 100.0 3.6E-29 7.9E-34 224.4 15.1 120 166-310 2-121 (123)
9 cd01212 JIP JNK-interacting pr 100.0 1.8E-28 3.9E-33 226.5 14.8 126 167-311 4-135 (148)
10 smart00462 PTB Phosphotyrosine 100.0 2.2E-27 4.8E-32 208.1 16.0 122 193-315 7-132 (134)
11 PF00640 PID: Phosphotyrosine 100.0 3.9E-27 8.4E-32 207.2 16.7 127 168-313 1-139 (140)
12 cd00934 PTB Phosphotyrosine-bi 99.9 9E-26 1.9E-30 194.1 15.3 114 194-308 6-123 (123)
13 cd01208 X11 X11 Phosphotyrosin 99.9 1.3E-25 2.9E-30 208.8 15.9 126 163-311 2-150 (156)
14 cd01214 CG8312 CG8312 Phosphot 99.9 1.8E-25 3.9E-30 203.6 13.5 121 190-312 2-130 (133)
15 PF06311 NumbF: NUMB domain; 99.9 3.4E-26 7.3E-31 194.1 5.0 52 376-427 1-53 (88)
16 cd01209 SHC SHC phosphotyrosin 99.9 2.4E-24 5.1E-29 201.3 13.3 129 164-310 9-159 (160)
17 cd01271 Fe65_C Fe65 C-terminal 99.9 1.3E-23 2.8E-28 189.3 14.3 116 192-310 4-122 (124)
18 PF14719 PID_2: Phosphotyrosin 99.8 1.5E-20 3.3E-25 179.3 14.6 119 192-312 2-127 (182)
19 cd01211 GAPCenA GAPCenA Phosph 99.8 3.3E-20 7.3E-25 167.0 13.8 114 191-308 3-124 (125)
20 cd01272 FE65_N Fe65 Phosphotyr 99.8 3E-20 6.6E-25 168.8 11.4 123 166-303 2-129 (138)
21 KOG3536|consensus 99.8 3.7E-21 8.1E-26 194.2 1.9 126 166-309 47-172 (321)
22 KOG3537|consensus 99.8 3.6E-20 7.9E-25 193.7 2.7 56 465-520 136-191 (543)
23 cd01269 PLX Pollux (PLX) Phosp 99.8 3.2E-18 6.9E-23 154.5 11.5 121 167-307 3-128 (129)
24 cd01213 tensin Tensin Phosphot 99.7 3E-16 6.5E-21 144.3 12.2 113 190-302 6-135 (138)
25 KOG3535|consensus 99.7 4.3E-16 9.4E-21 162.8 11.1 120 192-316 51-179 (557)
26 KOG3605|consensus 99.5 1.5E-15 3.3E-20 165.0 2.9 136 158-313 442-608 (829)
27 PF08416 PTB: Phosphotyrosine- 99.5 7.9E-14 1.7E-18 126.6 13.1 116 193-308 3-125 (131)
28 KOG3775|consensus 99.5 2.2E-14 4.8E-19 148.7 9.1 191 112-310 256-468 (482)
29 KOG1930|consensus 99.2 8E-11 1.7E-15 123.9 10.3 125 188-313 343-482 (483)
30 KOG3697|consensus 99.1 3.6E-11 7.7E-16 121.8 4.3 141 164-309 15-169 (345)
31 PF10480 ICAP-1_inte_bdg: Beta 98.8 4.8E-08 1E-12 94.4 11.7 84 226-309 108-196 (200)
32 cd01210 EPS8 Epidermal growth 98.7 4.7E-08 1E-12 89.4 8.8 117 168-305 4-124 (127)
33 KOG4448|consensus 98.6 2.3E-07 5E-12 95.7 11.3 119 189-309 60-186 (374)
34 cd01217 CG12581 CG12581 Phosph 98.4 2.1E-06 4.5E-11 80.5 11.1 86 206-291 19-140 (158)
35 cd01268 Numb Numb Phosphotyros 98.1 1.2E-06 2.6E-11 81.2 1.4 44 87-165 1-44 (138)
36 KOG3557|consensus 97.6 0.00029 6.3E-09 78.5 9.4 121 197-317 53-180 (721)
37 cd01274 AIDA-1b AIDA-1b Phosph 96.7 0.0088 1.9E-07 54.7 8.6 32 166-197 2-33 (127)
38 cd01215 Dab Disabled (Dab) Pho 96.6 0.0026 5.6E-08 59.5 4.5 40 90-164 3-42 (139)
39 cd01212 JIP JNK-interacting pr 96.5 0.0013 2.8E-08 61.7 2.3 111 192-317 5-137 (148)
40 cd01267 CED6_AIDA1b Phosphotyr 96.5 0.0017 3.6E-08 58.8 2.8 110 191-312 3-128 (132)
41 cd01270 DYC-1 DYC-1 (DYB-1 bin 96.4 0.0017 3.7E-08 60.7 2.0 30 136-165 4-33 (140)
42 KOG0507|consensus 96.4 0.00056 1.2E-08 77.6 -1.4 117 195-311 513-637 (854)
43 cd01271 Fe65_C Fe65 C-terminal 96.3 0.0021 4.6E-08 59.1 2.3 33 166-198 2-34 (124)
44 cd00900 PH-like Pleckstrin hom 96.3 0.04 8.6E-07 43.2 9.2 75 223-301 17-97 (99)
45 smart00462 PTB Phosphotyrosine 96.2 0.054 1.2E-06 47.7 10.5 126 165-311 3-132 (134)
46 cd01216 Fe65 Fe65 Phosphotyros 95.7 0.0095 2.1E-07 54.2 3.4 101 191-311 3-118 (123)
47 KOG0507|consensus 95.2 0.0024 5.2E-08 72.7 -2.6 180 130-316 658-847 (854)
48 cd00934 PTB Phosphotyrosine-bi 95.2 0.014 3E-07 50.4 2.6 32 166-197 2-33 (123)
49 PF00640 PID: Phosphotyrosine 94.7 0.015 3.3E-07 51.3 1.7 25 138-162 2-32 (140)
50 PF02174 IRS: PTB domain (IRS- 90.4 7 0.00015 34.2 12.0 74 225-306 21-97 (100)
51 KOG3536|consensus 87.5 0.12 2.5E-06 54.2 -1.2 138 85-274 32-191 (321)
52 cd01209 SHC SHC phosphotyrosin 86.9 0.46 1E-05 45.7 2.5 24 141-164 17-47 (160)
53 KOG4436|consensus 85.1 0.25 5.4E-06 57.3 -0.3 73 235-307 77-153 (948)
54 cd00824 PTBI IRS-like phosphot 84.9 11 0.00025 33.8 10.2 76 226-309 21-99 (104)
55 cd01203 DOK_PTB Downstream of 79.5 14 0.00031 33.5 8.7 72 226-305 21-95 (104)
56 cd01213 tensin Tensin Phosphot 79.5 1.1 2.3E-05 42.2 1.7 29 167-195 7-35 (138)
57 smart00310 PTBI Phosphotyrosin 78.9 21 0.00046 31.9 9.5 72 226-305 20-94 (98)
58 cd01214 CG8312 CG8312 Phosphot 76.2 1.4 3.1E-05 41.3 1.5 29 167-195 3-31 (133)
59 KOG4458|consensus 73.9 2.3 5.1E-05 35.9 2.0 19 165-183 33-51 (78)
60 PF14719 PID_2: Phosphotyrosin 50.2 9.7 0.00021 37.5 1.8 129 167-317 1-136 (182)
61 KOG4458|consensus 41.7 13 0.00027 31.6 0.9 28 192-219 36-63 (78)
62 KOG3775|consensus 40.3 19 0.00042 39.4 2.3 124 165-309 336-471 (482)
63 PF08416 PTB: Phosphotyrosine- 37.4 22 0.00048 32.8 1.9 30 168-197 2-31 (131)
64 PF06017 Myosin_TH1: Myosin ta 34.1 3E+02 0.0066 26.6 9.2 77 222-305 62-144 (199)
65 cd01273 CED-6 CED-6 Phosphotyr 33.0 60 0.0013 30.1 4.1 37 93-164 2-38 (142)
66 cd01211 GAPCenA GAPCenA Phosph 29.0 34 0.00073 32.1 1.7 26 169-194 5-30 (125)
67 KOG4815|consensus 26.7 92 0.002 33.7 4.6 24 286-309 3-27 (511)
68 PF03646 FlaG: FlaG protein; 25.8 1.8E+02 0.0039 25.4 5.6 49 206-254 34-87 (107)
69 KOG3697|consensus 22.4 44 0.00095 35.6 1.3 32 88-154 5-36 (345)
70 cd01208 X11 X11 Phosphotyrosin 22.4 2.1E+02 0.0046 27.9 5.7 27 138-164 8-40 (156)
71 PF07933 DUF1681: Protein of u 20.1 4.4E+02 0.0096 25.7 7.4 72 237-316 55-126 (160)
No 1
>KOG3537|consensus
Probab=100.00 E-value=5.5e-83 Score=659.69 Aligned_cols=310 Identities=65% Similarity=1.006 Sum_probs=268.7
Q ss_pred CCccchhhhhhhhcccCCCCCCCCCCCccccchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchh
Q psy67 60 MSRPRRSFRDSFRRRKDQHMPESSKPHQWQSDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAF 139 (526)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 139 (526)
|+|||| ||||||+.||||+|||||||+||++||.|||+|+||
T Consensus 1 m~rlrr----S~rR~~~~~Vpe~SkphQWQ~DE~aVRtgtCsF~Vk---------------------------------- 42 (543)
T KOG3537|consen 1 MNRLRR----SFRRRKKDYVPEASKPHQWQADEEAVRTGTCSFPVK---------------------------------- 42 (543)
T ss_pred Cchhhh----hHhhccCCCCCCCCCccccccchhhhccceeeeeee----------------------------------
Confidence 889997 557889999999999999999999999999999999
Q ss_pred cccceeeeeccccchhhHHHHhhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHH
Q psy67 140 KYLGCVEVYESRGMQVCEDALKVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLR 219 (526)
Q Consensus 140 ~~~g~~ev~es~g~~~c~~a~~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIK 219 (526)
|||+|||+||+|||+||+ |+|+||
T Consensus 43 -YLG~VEV~ESRGM~vCE~-------------------------------------------------------AlK~Lk 66 (543)
T KOG3537|consen 43 -YLGHVEVFESRGMQVCED-------------------------------------------------------ALKVLK 66 (543)
T ss_pred -eeeeEEEecccCcHHHHH-------------------------------------------------------HHHHHH
Confidence 999999999999999994 455567
Q ss_pred hcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHH
Q psy67 220 NSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHA 299 (526)
Q Consensus 220 asgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~A 299 (526)
++++|+.|..|+||.|||+|+|.+|+.+|.++.|++||||+.|+++++-|+|||||+.+.+|+||.|+..|+.+++++|+
T Consensus 67 as~rk~VkavL~VS~DGLRVVD~~tk~LiVDQTIEKVSFCAPDRn~Dr~FsYICRDGttRRW~CH~FlA~KdsGERLSHA 146 (543)
T KOG3537|consen 67 ASRRKPVKAVLWVSGDGLRVVDDKTKGLIVDQTIEKVSFCAPDRNHDRGFSYICRDGTTRRWMCHGFLACKDSGERLSHA 146 (543)
T ss_pred HhccCcceeEEEEccCceEEeccCccceeeeeeeeeeeccccccccccceeEEeecCCcceeeeeeeeeecchhhHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhcccccccCCCCCCccCcccccCCccccccccCCC---------CCC---CCCCCCCCCCCCC
Q psy67 300 VGCAFAACLERKQKRDKECGVTMNFDTTNSTFTRSGSFRQPTLTDRIIDGEV---------DMP---VSPLSPPPNSVPT 367 (526)
Q Consensus 300 IGQAFkVAfErKqKRekec~~~~~~~~~~~~~~r~~S~r~~~~t~~l~d~~~---------~~~---~~~~~~~~~~~~~ 367 (526)
||+||++|+|+|++|+||||+++.||+++++|+|+|||+.+..++.-...+. ... ..+....+++.++
T Consensus 147 VGCAFa~CLErKqRRdkEcGvt~~fda~~stftr~gSfr~~t~~~~~ere~~~~~~~~a~s~~t~k~~~~~~~~pg~~~~ 226 (543)
T KOG3537|consen 147 VGCAFAACLERKQRRDKECGVTATFDASRSTFTREGSFRLQTGTEDAEREATATQGTNASSADTAKTVGRRLAMPGPTAP 226 (543)
T ss_pred HHHHHHHHHHHHhhhhhhccceeeeeccccccccCCceeeccCCcchhhccccccccccccccccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999999777633211110 000 1111122333222
Q ss_pred CC-----------CCCCCCCCCccCCCCCChhhhhhcCCccCCcCCcc-CCCcccccccccCCCCchhhhhhccccCccc
Q psy67 368 TP-----------GSVKPPNPHAIERPHAPIPLLQRQGSFRGFSQLNQ-ASPFKRQLSLRIGDLPSNLERTRLQQLSLTQ 435 (526)
Q Consensus 368 tp-----------~~~~~~~~~aipR~~a~~~~l~RQgS~r~f~~~~~-~spFkrqlSlR~~~lp~~~~r~~~~~~~~~~ 435 (526)
+| +..++.+++|||||||+++||+|||||||||+++| ++|||||||||+|+|||++||++||+++||+
T Consensus 227 ~P~s~~~~~~~as~tl~~~~~~aipR~ha~~~~l~RQGSfRg~p~l~~k~sPFKRqlSLR~n~lps~~qR~~~f~s~gt~ 306 (543)
T KOG3537|consen 227 DPSSPIHKEDDASATLKPFNPFAIPRPHAPPEQLERQGSFRGFPALSQKQSPFKRQLSLRINELPSTTQRSTDFPSFGTQ 306 (543)
T ss_pred CCCcccccCccccchhcccccccccCCCCCHHHhhccccccCCcccccccChhhhhhhhhhccCCchhhccccccccccc
Confidence 22 24567999999999999999999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCCCcccCCCCCCCCCCCCCCCCCCCCcc
Q psy67 436 ANHANNIAPLIYLKTPVSPIPESISPLKSNGDPG 469 (526)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (526)
. .-.++|....+|++.+ |+|+.+.+-+|
T Consensus 307 ~-----~~Ep~~~Gdsdsl~a~-itp~~~a~asp 334 (543)
T KOG3537|consen 307 L-----YMEPIYEGDSDSLGAG-ITPPVSAKASP 334 (543)
T ss_pred C-----cccCCCCCccCCcccc-ccCccccccCc
Confidence 3 3345566777887777 88887776665
No 2
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain. Numb Phosphotyrosine-binding (PTB) domain. Numb is a membrane associated adaptor protein, which is a determinant of asymmetric cell division. Numb has an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=100.00 E-value=5e-40 Score=300.29 Aligned_cols=118 Identities=84% Similarity=1.410 Sum_probs=112.3
Q ss_pred cceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC
Q psy67 197 LGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG 276 (526)
Q Consensus 197 LGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~ 276 (526)
||+++|.+++|++++.+||++|+.+++|+++|.|+||.+||+|+|.+|++++++|+|++||||+.|++|+++||||++|+
T Consensus 21 LG~veV~~~rG~~v~~~A~~klk~~~~k~~kv~L~VS~~Gi~vvd~~Tk~~i~~~~i~~ISfca~D~~d~r~FayIakd~ 100 (138)
T cd01268 21 LGHVEVDESRGMQVCEDALKRLKASRRKPVKAVLWVSGDGLRVVDEKTKGLIVDQTIEKVSFCAPDRNFDRGFSYICRDG 100 (138)
T ss_pred cceEEccCcCCChHHHHHHHHHHhhccCCCEEEEEEecCcEEEEecCCCcEEEEEeEEEEEEEecCCCCCcEEEEEecCC
Confidence 66666788888999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred CcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhh
Q psy67 277 TTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKR 314 (526)
Q Consensus 277 st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKR 314 (526)
.+++|+||||.|.+++|++|+++||+||++|||+|++|
T Consensus 101 ~~~r~~CHvF~~~k~sa~~i~~avG~AF~~c~~~~~~~ 138 (138)
T cd01268 101 TTRRWMCHGFLAVKDTGERLSHAVGCAFAACLERKQRR 138 (138)
T ss_pred CcccEEEEEEEeeccchhHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999998789999999999999999999986
No 3
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b is an amyloid-beta precursor protein interacting protein. It consists of ankyrin repeats, a SAM domain and a C-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.97 E-value=1.8e-31 Score=240.43 Aligned_cols=119 Identities=24% Similarity=0.413 Sum_probs=107.5
Q ss_pred hhceEecceEecccCcChHHHHHHHHHHHhcC---CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCc
Q psy67 191 LKVLRYLGCVEVYESRGMQVCEDALKVLRNSR---RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEK 267 (526)
Q Consensus 191 IrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg---KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~K 267 (526)
.+.++|||+++|.+++|++++++||++|+.+. +++++|.|+||.+||+|+|.+|++++++|+|++||||+.|++|.+
T Consensus 3 ~f~akyLGs~eV~~~~G~~~~~~Am~kik~~~~~~~k~~~V~L~IS~~Gv~v~d~~tk~~i~~~~i~~ISf~~~D~~d~~ 82 (127)
T cd01274 3 VYRAHYLGSLEIGELEGTDSTHAAMTKIKESIIDWETIPRVTLDLTCNGVKFIDETFKTLIDGHGIYNIRCVCQDREDLN 82 (127)
T ss_pred EEEEEccceEEccCCCCcHHHHHHHHHHHHhhhccCCCCEEEEEEeCCeEEEEECCCCeEEEEeeeeEEEEEecCCCCce
Confidence 34567777777778888889999999997654 678999999999999999999999999999999999999999999
Q ss_pred eEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHHH
Q psy67 268 GFSYICRDGTTRRWMCHGFLALKES-GERLSHAVGCAFAACLER 310 (526)
Q Consensus 268 vFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfEr 310 (526)
+|+||++|+. ++++||||.|.+.+ |++|+.+|||||++||+-
T Consensus 83 ~FayIakd~~-~~~~CHvF~~~~~~~A~~I~~tigqAF~~ay~~ 125 (127)
T cd01274 83 FFAYITKDTE-NRHYCHVFCVLTSGLAAEIITTLGQAFEVAYQL 125 (127)
T ss_pred EEEEEeeCCC-CCEEEEEEEcCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999987 89999999997654 999999999999999984
No 4
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.97 E-value=3.3e-30 Score=230.90 Aligned_cols=128 Identities=23% Similarity=0.452 Sum_probs=102.9
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCC
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETK 245 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTK 245 (526)
+.|.|+||||+||.+++|++++.+||.+++....+. .+.+++.++|+|.||.+||+|+|.+|+
T Consensus 2 v~f~vkyLGs~~V~~~~g~~~~~~Ai~~l~~~~~~~-----------------~~~~~k~~~V~L~IS~~gi~i~d~~t~ 64 (132)
T cd01267 2 VVYRAKFLGSLEIGKLKGTEVAREAIRKLKFSRILK-----------------TAEWEKIPKVELDISIKGVKIIDPKTK 64 (132)
T ss_pred cEEEEEEEEEEEecCCCChHHHHHHHHHHHhhhhcc-----------------hhccCCCCeEEEEEEcCcEEEEeCCCC
Confidence 467777777777666555555444444443210000 012357899999999999999999999
Q ss_pred ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHHH
Q psy67 246 GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKES-GERLSHAVGCAFAACLER 310 (526)
Q Consensus 246 elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfEr 310 (526)
+++++|+|++||||+.|+++.++||||++++..++++||||.|++.+ |++|+.+||+||++||+.
T Consensus 65 ~~l~~~~i~~ISfc~~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~AF~~ay~~ 130 (132)
T cd01267 65 TVLHGHPLYNISCCAQDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQAFELAYRL 130 (132)
T ss_pred cEEEEcccceEEEEecCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998899999999998743 999999999999999985
No 5
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.97 E-value=4.6e-30 Score=233.98 Aligned_cols=129 Identities=26% Similarity=0.500 Sum_probs=105.3
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHH-hcCCCCcEEEEEEECCeEEEEECCC
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLR-NSRRRPVRAILYVSGDGLRVVDDET 244 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIK-asgKK~qKV~L~VS~dGIrVVD~kT 244 (526)
+.|.|||||++||.+++|++++.+||+++++- ..+++.. ...+|+++|.|+||.+||+|+|.+|
T Consensus 9 v~f~vkyLG~~eV~~~~g~~v~~eAi~ki~~a---------------~~~k~~~~~~~~k~~~V~L~IS~~GI~v~d~~t 73 (142)
T cd01273 9 VEYVAKFLGCVEVDQPKGSEVVREAIRKLRFA---------------RDLKKSEQTRTAKLQKVEIRISIDGVIIAEPKT 73 (142)
T ss_pred eEEEEEEeeeEEecCCCCchHHHHHHHHHHHH---------------HhhhhccccccccCcEEEEEEECCeEEEEEcCC
Confidence 67888888888887776666666666555421 0111110 0125789999999999999999999
Q ss_pred CceeeeeecceeEEEeeCCCCCceEEEEEecCCc-CeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 245 KGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTT-RRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 245 KelL~s~pI~rISFCA~D~~d~KvFAFIARd~st-~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
++++++|+|++||||+.|++++++|+||++++.. +++.||||.+.+ .|++|+++|||||++||++
T Consensus 74 ~~~~~~~~i~~ISfca~d~~~~r~FayIak~~~~~~~~~ChvF~s~~-~A~~I~~tigqAF~~ay~~ 139 (142)
T cd01273 74 KAPMHTFPLGRISFCADDKDDKRMFSFIAKAEGASGKHSCFVFTSEK-LAEDITLTIGQAFDLAYRK 139 (142)
T ss_pred CcEEEEcCcceEEEEecCCCCCeEEEEEecCCCCCCcEEEEEEeccc-hHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999875 899999998864 4999999999999999985
No 6
>cd01270 DYC-1 DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 contains an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domains of both SHC and IRS-1, for example, bind to a NPXpY sequence. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.97 E-value=2.7e-30 Score=236.92 Aligned_cols=121 Identities=28% Similarity=0.445 Sum_probs=103.8
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHH----HhcCCCCcEEEEEEECCeEEEE
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVL----RNSRRRPVRAILYVSGDGLRVV 240 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrI----KasgKK~qKV~L~VS~dGIrVV 240 (526)
++.|.||||||+||.+++ |++++.+||++| ++.+.|.++|.|.||.+||+|+
T Consensus 2 GitF~vKYlG~~eV~~~~------------------------g~~~~~~A~rrir~~~ka~~~Kk~kV~l~VS~~Gv~v~ 57 (140)
T cd01270 2 GITFEAKYVGSEEVPRPN------------------------TRAEIVAAMRRIRYEFKAQNIKKRKVTIHVSVDGVKVV 57 (140)
T ss_pred ceEEEEEEcceEEecCCC------------------------CcCHHHHHHHHHHHHHHHhCCCceeEEEEEecCcEEEE
Confidence 467777777777776654 455555555555 3567788999999999999999
Q ss_pred ECC------------CCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHHHHHHHHH
Q psy67 241 DDE------------TKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKES-GERLSHAVGCAFAAC 307 (526)
Q Consensus 241 D~k------------TKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVA 307 (526)
|.+ |+.++++|+|++||||++|++++++|||||+|+.++.++||||.|.+.+ |++|+++|||||++|
T Consensus 58 d~k~~~~~~~~~~~~tk~li~~~~i~rISf~a~D~~~~k~FayIakd~~~~~~~ChvF~~~k~~~A~~I~~TIGqAFev~ 137 (140)
T cd01270 58 LKKKKRKKKNWTWDESKILVMNHPIYRIFYVSHDSQDLKIFSYIARDGASNTFKCNVFKSHKKSQAMRIVRTVGQAFEVC 137 (140)
T ss_pred ecccccccccccccCcccEEEecCeeEEEEeecCCCCCcEEEEEecCCCCCceEEEEEEEcChhhHHHHHHHHHHHHHHH
Confidence 975 6789999999999999999999999999999999999999999999764 999999999999999
Q ss_pred HH
Q psy67 308 LE 309 (526)
Q Consensus 308 fE 309 (526)
|+
T Consensus 138 ~~ 139 (140)
T cd01270 138 HK 139 (140)
T ss_pred hc
Confidence 85
No 7
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=99.96 E-value=1.6e-29 Score=231.58 Aligned_cols=117 Identities=24% Similarity=0.480 Sum_probs=97.1
Q ss_pred ceEecceEecccCcChHHHHHHHHHHH----hcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCce
Q psy67 193 VLRYLGCVEVYESRGMQVCEDALKVLR----NSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 193 qLKYLGsVeV~e~rG~qV~eeAVkrIK----asgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~Kv 268 (526)
++||||+++|++++|+++|++||++|+ +++++.++|.|+||.+||+|+|.+|+.++++|+|++||||+.|+.|+++
T Consensus 16 ~aKylG~~eV~e~RG~~v~~~Ai~klk~~~k~~~~kk~kV~L~IS~dGi~v~D~~T~~ll~~~~i~rISfca~D~~d~r~ 95 (139)
T cd01215 16 KAKLIGIQEVDKARGDAMCAEAMRKAKSIIKGAGAHKTRITLQINIDGIKVLDEKTGAVLHHHPVHRISFIARDSTDARA 95 (139)
T ss_pred EEEecccEecccCCchHHHHHHHHHHHHHhhhhccccceEEEEEccCCEEEEcCCCCcEEEeeceeeEEEEecCCCCCeE
Confidence 344444444556666677777777764 4667889999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCeeeEEEEEecCc--cHHHHHHHHHHHHHHHHHHhhh
Q psy67 269 FSYICRDGTTRRWMCHGFLALKE--SGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 269 FAFIARd~st~rf~CHVF~C~K~--kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|+|||+++.+ ||.|.+-+. .|++|+++|+|||++|||.|+|
T Consensus 96 FsyI~~~~~~----~H~f~~~k~~k~A~~i~lti~~aF~va~e~k~~ 138 (139)
T cd01215 96 FGYVYGEPGG----KHRFYGIKTAQAADQVVLAIRDLFQVVFELKKK 138 (139)
T ss_pred EEEEEEcCCC----cEEEEEEEhHHcchhhhhhHHHHHHHHHHHhhc
Confidence 9999999654 566666544 2999999999999999998775
No 8
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.96 E-value=3.6e-29 Score=224.40 Aligned_cols=120 Identities=23% Similarity=0.348 Sum_probs=105.7
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCC
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETK 245 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTK 245 (526)
+.|.|+||||+||.+++|++++++||++|++-+ ...++++|.|.|+.+||+|+|++|+
T Consensus 2 ~~F~VkyLG~~eV~~~~g~~vv~~ai~~L~~~~----------------------~~~~~~~v~l~Vs~~~l~l~d~~t~ 59 (123)
T cd01216 2 KVFAVRSLGWVEVAEEDGSEALNKAIDDLSSCS----------------------NWEDWKDLNMDLAPSTLSLIDPDNL 59 (123)
T ss_pred cEEEEEeeeeEEECCCCCHHHHHHHHHHHHhcc----------------------ccccCeEEEEEEecCcEEEEcCCCC
Confidence 679999999999988877777777776665421 1235679999999999999999999
Q ss_pred ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 246 GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 246 elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
+++++++|++||||+.|+++ +.||||++++. ++|.||||.|++ .|++|+.||++||+.+|++
T Consensus 60 ~~l~~~~i~~Isf~~~gk~~-r~FafI~~~~~-~~~~CHVF~c~~-~a~~i~~tv~~ac~l~y~k 121 (123)
T cd01216 60 TVLHECRVRYLSFWGVGRDV-RDFAFIMRTER-RRFMCHVFRCEP-NAGALATTVEAACKLRYQK 121 (123)
T ss_pred eEEEEEEeeEEEEEEcCCCC-cEEEEEEEcCC-CeEEEEEEEcCC-CHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999988 99999999986 999999999987 4999999999999999984
No 9
>cd01212 JIP JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JIP is a mitogen-activated protein kinase scaffold protein. JIP consists of a C-terminal SH3 domain, followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.96 E-value=1.8e-28 Score=226.48 Aligned_cols=126 Identities=28% Similarity=0.412 Sum_probs=97.3
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCc
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKG 246 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKe 246 (526)
.|.|||||++||.+++|++++.+||++++.. .+.....+++++|.|.||.+||+|+|..|++
T Consensus 4 ~f~vkyLGsveV~~~kG~~v~~~A~rki~~~------------------~k~~~~~~~~~~v~L~VS~~Girl~D~~t~~ 65 (148)
T cd01212 4 RFLLGYLGSVEVLAHKGNGVLCQAMRKIVGE------------------YKNSEESPTPQTCILEISDRGLRMVDRSGPN 65 (148)
T ss_pred eEEeEecceEEecCCCCcHHHHHHHHHHHHH------------------HHhhccCCCCcEEEEEEecCcEEEEecCCCc
Confidence 5667777666666555555555555444210 0111113567899999999999999999985
Q ss_pred e-----eee-eecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHh
Q psy67 247 L-----MVD-QTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERK 311 (526)
Q Consensus 247 l-----L~s-~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErK 311 (526)
. ++. ++|++||||+.|++|+++||||++++..++|.||||.+.+ .|++|+++||+||+.||++.
T Consensus 66 ~~~~~~~~~f~~l~nISFCa~d~~~~r~F~FIak~~~~~~~~CHVF~s~~-~~~~I~~aIG~AF~~~y~~~ 135 (148)
T cd01212 66 KDKKPCIDFFYSLKNISFCGFHPRDHRYFGFITKHPLLQRFACHVFKSSE-STRPVAEAVGRAFQRFYQEF 135 (148)
T ss_pred ccccchhhccccccceEEEEEcCCCCcEEEEEeccCCCCceEEEEEEeCC-cchHHHHHHHHHHHHHHHHH
Confidence 3 222 4699999999999999999999999999999999999954 69999999999999999953
No 10
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=99.95 E-value=2.2e-27 Score=208.14 Aligned_cols=122 Identities=36% Similarity=0.679 Sum_probs=103.8
Q ss_pred ceEecceEecccCcChHHHHHHHHHHHh----cCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCce
Q psy67 193 VLRYLGCVEVYESRGMQVCEDALKVLRN----SRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 193 qLKYLGsVeV~e~rG~qV~eeAVkrIKa----sgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~Kv 268 (526)
.++|||+++|.+++|++++++||++|+. ..+++++|.|.||.+||+|+|.+++.++++|+|++||||+.|++++++
T Consensus 7 ~v~YLGs~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~v~~~~~~~~l~~~~l~~Isf~~~~~~~~~~ 86 (134)
T smart00462 7 RVKYLGSVEVPEARGLQVVQEAIRKLRAAQGSEKKEPQKVILSISSRGVKLIDEDTKAVLHEHPLRRISFCAVGPDDLDV 86 (134)
T ss_pred EEEEEEEEEecCCCCcHHHHHHHHHHHHhhhhccCCCCEEEEEEECCcEEEEECCCCeEEEEccccceEEEecCCCCCcE
Confidence 3444444445555667777777777764 346789999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhh
Q psy67 269 FSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRD 315 (526)
Q Consensus 269 FAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKRe 315 (526)
|+||++++..+.+.||||+|++. |++|+.+|++||++||+++.++.
T Consensus 87 F~fI~~~~~~~~~~CHvF~c~~~-a~~i~~~i~~aF~~a~~~~~~~~ 132 (134)
T smart00462 87 FGYIARDPGSSRFACHVFRCEKA-AEDIALAIGQAFQLAYELKLKAR 132 (134)
T ss_pred EEEEeeCCCCCeEEEEEEEcCch-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999998888899999999875 89999999999999999776543
No 11
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=99.95 E-value=3.9e-27 Score=207.15 Aligned_cols=127 Identities=33% Similarity=0.642 Sum_probs=107.1
Q ss_pred EEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhc-----------CCCCcEEEEEEECCe
Q psy67 168 FALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNS-----------RRRPVRAILYVSGDG 236 (526)
Q Consensus 168 FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKas-----------gKK~qKV~L~VS~dG 236 (526)
|.|+|||+++|.+++. .....|++++.+||.+|+.. .++.++|.|.||.+|
T Consensus 1 F~vkYLGs~~V~~~~~------------------~~~~~g~~~v~~ai~~~~~~~~~~~~~~~~~~~~~~~V~l~vs~~g 62 (140)
T PF00640_consen 1 FEVKYLGSVEVSSSRR------------------GDKSRGSDVVREAIQRLKAEKIAKSKKSKSNKKKPQKVTLNVSSDG 62 (140)
T ss_dssp EEEEEEEEEEESSSSS------------------TCHHHHHHHHHHHHHHHHHHCCCSHHHHHTTTSTSEEEEEEEETTE
T ss_pred CEEEEEEEEEECCccC------------------CCcchhHHHHHHHHHHHHhhhhhhhhccccccccCeEEEEEEcCCe
Confidence 6777777777766510 01114566666666666543 567899999999999
Q ss_pred EEEEECCCCceeeeeecceeEEEee-CCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 237 LRVVDDETKGLMVDQTIEKVSFCAP-DRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 237 IrVVD~kTKelL~s~pI~rISFCA~-D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|+|+|.++++++++++|++||||+. |.++.++|+||++++..+.+.||||.|.+ .|++|+.+|++||++||+++++
T Consensus 63 I~v~~~~t~~~l~~~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~~~~CHVF~~~~-~A~~i~~~i~~aF~~a~~~~~~ 139 (140)
T PF00640_consen 63 IKVIDPDTGEVLMSHPIRRISFCAVGDPDDKRVFAFIARDPRSSRFYCHVFKCED-QAQEICQAIGQAFELAYQEFLR 139 (140)
T ss_dssp EEEEETTTTCEEEEEEGGGEEEEEESSTTETTEEEEEEEETSSSCEEEEEEEESS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCccccccccCCccceEEEEecCCCcceEEEEEeccCCCCccccEeeeHhh-HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999 99999999999999999999999999998 7999999999999999997653
No 12
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=99.94 E-value=9e-26 Score=194.12 Aligned_cols=114 Identities=36% Similarity=0.659 Sum_probs=98.1
Q ss_pred eEecceEecccCcChHHHHHHHHHHHhc----CCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceE
Q psy67 194 LRYLGCVEVYESRGMQVCEDALKVLRNS----RRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGF 269 (526)
Q Consensus 194 LKYLGsVeV~e~rG~qV~eeAVkrIKas----gKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvF 269 (526)
++|||+++|.+++|++++++||.+|+.. +++.++|.|.||.+||+|+|.++++++.+|||++|+||+.|+.++++|
T Consensus 6 v~ylG~~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~gv~l~d~~~~~~l~~~~l~~Is~~~~~~~~~~~F 85 (123)
T cd00934 6 VKYLGSVEVPEPRGSQVVRDAIRKLKAASKQGGEKGQKVILSVSSDGVKLIDPKTKEVLASHPIRRISFCAADPDDLRIF 85 (123)
T ss_pred EEEEEEEEecCCCCchHHHHHHHHHHHhhhhcccCCCEEEEEEEcCcEEEEeCCCCcEEEeeccceEEEEECCCCCCcEE
Confidence 3344444444556677777777777543 367899999999999999999999999999999999999999999999
Q ss_pred EEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHH
Q psy67 270 SYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACL 308 (526)
Q Consensus 270 AFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAf 308 (526)
+||++++....+.||||+|.+. |+.|+.+|++||+.+|
T Consensus 86 ~~i~~~~~~~~~~CHvF~c~~~-a~~i~~~l~~af~~~~ 123 (123)
T cd00934 86 AFIAREPGSSRFECHVFKCEKV-AEPIALTLGQAFQVAY 123 (123)
T ss_pred EEEEEcCCCCcEEEEEEEeCch-HHHHHHHHHHHHHHhC
Confidence 9999998888999999999887 9999999999999875
No 13
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=99.93 E-value=1.3e-25 Score=208.79 Aligned_cols=126 Identities=16% Similarity=0.306 Sum_probs=108.5
Q ss_pred heeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhc-CC--CCcEEEEEEECCeEEE
Q psy67 163 VLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNS-RR--RPVRAILYVSGDGLRV 239 (526)
Q Consensus 163 l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKas-gK--K~qKV~L~VS~dGIrV 239 (526)
+.++.|.|+||||++|..++. ...++.|+++++||.+||++ |+ ..++|.|.||.+||+|
T Consensus 2 ~~Gv~f~a~YlG~t~~~~~~~------------------~~~~tR~~~a~Eai~rik~~eG~~~~~t~V~L~IS~~gV~v 63 (156)
T cd01208 2 IEGVLFRARYLGSTQLLCEKT------------------PSKNVRMXQAQEAVSRIKAPEGESQPSTEVDLFISTEKIMV 63 (156)
T ss_pred cCceEEEEEeeceeeeeecCC------------------CChhhhHHHHHHHHHHHhccccCCCCCcEEEEEEEeCeEEE
Confidence 568999999999999987765 35678999999999999854 32 3579999999999999
Q ss_pred EECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCC--------------------cCeeeEEEEEecCccHHHHHHH
Q psy67 240 VDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGT--------------------TRRWMCHGFLALKESGERLSHA 299 (526)
Q Consensus 240 VD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~s--------------------t~rf~CHVF~C~K~kAq~Ia~A 299 (526)
+|++|++++++|+|++||||+++ +.+|+|+++... ..++.||||.|++ |+.|+++
T Consensus 64 ~~~~tk~im~~h~L~~ISy~AD~---~d~~v~mAkr~~~~~~~~~~~~~~~~~~~~~~~~k~~ChVFes~~--Aq~Ia~T 138 (156)
T cd01208 64 LNTDLQEIXMDHALRTISYIADI---GDLVVLMARRRIPRSSSQENSEASHPSQDGKRTPKXICHVFESDE--AQFIAQS 138 (156)
T ss_pred EecCccceeccCcccceEEEecC---CCeEEEEEeccccccccccccccCCcccccccccceeEEEEecCc--HHHHHHH
Confidence 99999999999999999999843 357999998432 2458999999984 9999999
Q ss_pred HHHHHHHHHHHh
Q psy67 300 VGCAFAACLERK 311 (526)
Q Consensus 300 IGQAFkVAfErK 311 (526)
|||||++||++.
T Consensus 139 IGQAF~lAY~~f 150 (156)
T cd01208 139 IGQAFQVAYQEF 150 (156)
T ss_pred HHHHHHHHHHHH
Confidence 999999999964
No 14
>cd01214 CG8312 CG8312 Phosphotyrosine-binding (PTB) domain. CG8312 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.93 E-value=1.8e-25 Score=203.58 Aligned_cols=121 Identities=22% Similarity=0.342 Sum_probs=108.3
Q ss_pred hhhceEecceEecccCcChHHHHHHHHHHHh----cCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCC
Q psy67 190 ALKVLRYLGCVEVYESRGMQVCEDALKVLRN----SRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNH 265 (526)
Q Consensus 190 AIrqLKYLGsVeV~e~rG~qV~eeAVkrIKa----sgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d 265 (526)
..++++|||++.|..++|+.+.++||++|+. .+++.++|.|.|+++||+++|.+ +.+..++|++||||++|.++
T Consensus 2 ~ty~VkYLG~~~t~~~~Geg~t~~av~~I~~~~~~~~k~~~km~L~Vsp~GI~~~~~~--~~~~~~~i~RIsYCsad~~~ 79 (133)
T cd01214 2 PTYTVLYLGNVLTIQARGEGCTEKALGKIWSKYEAGARQDTKMKLTVSASGLKAVTAQ--RGLTEYWAHRITYCVAPARY 79 (133)
T ss_pred CcEEEEEcccccccccCCCccHHHHHHHHHHHHhhcccccceEEEEEcCCceEEEecc--ccceEEEEeeeeeecCCcCC
Confidence 3578899999999999999999999999964 33678999999999999999987 45778999999999999999
Q ss_pred CceEEEEEecCC---cCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHHHhh
Q psy67 266 EKGFSYICRDGT---TRRWMCHGFLALKES-GERLSHAVGCAFAACLERKQ 312 (526)
Q Consensus 266 ~KvFAFIARd~s---t~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfErKq 312 (526)
+++|+||+++.. ...+.||+|+|.+.+ |++|+.+|+|+|..||++.+
T Consensus 80 p~VFa~I~r~~~~~~~~~l~CHAvlC~k~~~A~aial~L~q~f~~A~~~~k 130 (133)
T cd01214 80 PKVFCWIYRHEGKHLKVELRCHAVLCSKPEKAQAIALLLYQTLANALAEFK 130 (133)
T ss_pred CcEEEEEEeecccccCcceEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999763 468999999999875 99999999999999999754
No 15
>PF06311 NumbF: NUMB domain; InterPro: IPR010449 This entry represents a domain found in the cell-fate determinant Numb, and in related proteins. In Drosophila, two signalling pathways, one mediated by Numb and the other by Notch, play essential but antagonistic roles in enabling the two daughters to adopt different fates after a wide variety of asymmetric cell divisions []. Numb acts to inhibit Notch signalling, this inhibition being critical for many cell fate decisions []. Mammalian Numb (mNumb) has multiple functions and plays important roles in the regulation of neural development, including maintenance of neural progenitor cells and promotion of neuronal differentiation in the central nervous system (CNS) [].
Probab=99.92 E-value=3.4e-26 Score=194.14 Aligned_cols=52 Identities=69% Similarity=1.170 Sum_probs=50.7
Q ss_pred CCCccCCCCCChhhhhhcCCccCCcCCcc-CCCcccccccccCCCCchhhhhh
Q psy67 376 NPHAIERPHAPIPLLQRQGSFRGFSQLNQ-ASPFKRQLSLRIGDLPSNLERTR 427 (526)
Q Consensus 376 ~~~aipR~~a~~~~l~RQgS~r~f~~~~~-~spFkrqlSlR~~~lp~~~~r~~ 427 (526)
|||||||||||+++|+||||||||+++++ ++|||||||||+|+||||+||++
T Consensus 1 nP~AIpRphA~~~~L~RQgS~R~f~~l~~~~sPFKRqlSLRln~lPS~~qR~~ 53 (88)
T PF06311_consen 1 NPHAIPRPHAPPSMLERQGSFRGFPKLSQQTSPFKRQLSLRLNELPSTLQRQE 53 (88)
T ss_pred CCccccCCCCCHHHHHhhhcccccccccccCCCceeeeeeeccCCCcccchhc
Confidence 79999999999999999999999999998 59999999999999999999999
No 16
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.91 E-value=2.4e-24 Score=201.30 Aligned_cols=129 Identities=19% Similarity=0.357 Sum_probs=103.1
Q ss_pred eeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhc---------------------C
Q psy67 164 LIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNS---------------------R 222 (526)
Q Consensus 164 ~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKas---------------------g 222 (526)
.++.|.||||||+||.++.. .+.-+++++++.+||.+++.. .
T Consensus 9 ~GV~y~vrYlG~~eV~~Smr-----------------~~~~~~Rtqv~rEaI~rV~ea~~~~~~~~~~~~~~~~~~~~~~ 71 (160)
T cd01209 9 PGVSYLVRYMGCVEVLQSMR-----------------ALDFETRTQVTRECISLVCEAVGGAKAATERNLNSILGRSNLK 71 (160)
T ss_pred CCcEEEEEEeeEEeehhhcc-----------------cCCcchhHHHHHHHHHHHHhccccccccccccccccccCcccc
Confidence 58999999999999986521 022334555555555555321 1
Q ss_pred CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEee-CCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHH
Q psy67 223 RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAP-DRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVG 301 (526)
Q Consensus 223 KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~-D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIG 301 (526)
+...+|.|.||.+||++++.+|++++++|+|++||||+. |++..+.|+|||+++. +...||||.|....|+.|+.+||
T Consensus 72 ~~~~~V~l~IS~~~v~~~~~~t~~ii~~H~l~~ISfaa~gd~d~~~~~ayIAKd~~-~~r~ChVf~~~~~lAq~Ii~TIG 150 (160)
T cd01209 72 FAGMPITINVSSSSLNLMAQDCKQIIANHHMQSISFASGGDPDTAEYVAYIAKNPD-NQRACHVLECPEGLAQDLISTIG 150 (160)
T ss_pred ccCceEEEEEEeeEEEEeccCchhHHhcCCCcceEEEeCCCCCcceeEEEEEcCCC-CCceeEEEEcCCchHHHHHHHHH
Confidence 125779999999999999999999999999999999997 5556689999999975 56689999997545999999999
Q ss_pred HHHHHHHHH
Q psy67 302 CAFAACLER 310 (526)
Q Consensus 302 QAFkVAfEr 310 (526)
|||++||++
T Consensus 151 QAF~lay~~ 159 (160)
T cd01209 151 QAFELRFKQ 159 (160)
T ss_pred HHHHHHhhc
Confidence 999999984
No 17
>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.91 E-value=1.3e-23 Score=189.29 Aligned_cols=116 Identities=20% Similarity=0.341 Sum_probs=100.6
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEECCC-CceeeeeecceeEEEeeCCCCCce
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDDET-KGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~kT-KelL~s~pI~rISFCA~D~~d~Kv 268 (526)
++++|||+++|++++||+++.+||++|+.++ +++.+|.+.|++.+|.++|.++ .+++.+++|+.||||+.|+ |.+.
T Consensus 4 f~~~yLG~~~V~~p~Gmdvln~AI~~l~~~~~~~~w~~V~vsvaps~v~v~~~~~~~~~l~ecrVr~lSF~GvgK-d~k~ 82 (124)
T cd01271 4 FRVQYLGMLPVDKPTGMEILNSAIDNLMSSSNKEDWLSVNVNVAPSTITVISEKNEEEVLVECRVRYLSFLGIGK-DVHT 82 (124)
T ss_pred EEEEEeccEeecCCccHHHHHHHHHHHHhcCCcccCceEEEEeCCceEEEEccCccceeeeeeeEEEeccccCCC-CccE
Confidence 3566677777777888888888888887554 5689999999999999999997 6799999999999999986 8889
Q ss_pred EEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 269 FSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 269 FAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
||||+.. ..++|.||||.|++. |.+|+.||++||++.||+
T Consensus 83 fafI~~~-~~~~f~ChVF~ce~~-A~~ls~av~aAc~lrYQk 122 (124)
T cd01271 83 CAFIMDT-GNQRFECHVFWCEPN-AGNVSKAVEAACKLRYQK 122 (124)
T ss_pred EEEEEec-CCCcEEEEEEEecCC-hHHHHHHHHHHHHHHHhh
Confidence 9999965 589999999999864 889999999999999984
No 18
>PF14719 PID_2: Phosphotyrosine interaction domain (PTB/PID)
Probab=99.85 E-value=1.5e-20 Score=179.28 Aligned_cols=119 Identities=23% Similarity=0.400 Sum_probs=104.8
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhcC---CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCce
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNSR---RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKasg---KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~Kv 268 (526)
++|+|||++.+...+|++.+++||..|+... +...+|.|.|+..||++.+.+ .-+..|+|++|+||++|..++++
T Consensus 2 y~V~YLG~~~t~~~~Gegct~kpV~~lw~~~~~~k~~~~m~L~V~~~Gik~~~~~--~~~~~y~i~RItYC~ad~~~PrV 79 (182)
T PF14719_consen 2 YKVRYLGNVLTRGAKGEGCTEKPVSKLWRRYKQGKPDKKMKLTVSPSGIKMETKD--KGLTEYWIHRITYCTADPQHPRV 79 (182)
T ss_pred eEEEEecceecccccccchHHHHHHHHHHHhccCCCCceeEEEEcCCceEEEECC--CCceEEEeeeEEEecCCCCCCce
Confidence 5788888888999999999999999997532 347899999999999999988 55677999999999999999999
Q ss_pred EEEEEecCC---cCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHHHhh
Q psy67 269 FSYICRDGT---TRRWMCHGFLALKES-GERLSHAVGCAFAACLERKQ 312 (526)
Q Consensus 269 FAFIARd~s---t~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfErKq 312 (526)
|+||+++.. ...+.||+|.|+++. |++|+.+|.++|+.||+..+
T Consensus 80 FawIyrhe~~~~~~~L~CHAvlC~k~~~Akama~~L~~af~~Af~~~k 127 (182)
T PF14719_consen 80 FAWIYRHEGKKLKVELRCHAVLCSKEEKAKAMARALYQAFRSAFQEFK 127 (182)
T ss_pred EEEEEEcccCCCcccEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999753 367999999999874 99999999999999999553
No 19
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.84 E-value=3.3e-20 Score=167.01 Aligned_cols=114 Identities=17% Similarity=0.386 Sum_probs=98.0
Q ss_pred hhceEecceEecccCcChHHHHHHHHHHHhcCCC-CcEEEEEEE--CCe-EEEEECCCCceeeeeecceeEEEee---CC
Q psy67 191 LKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRR-PVRAILYVS--GDG-LRVVDDETKGLMVDQTIEKVSFCAP---DR 263 (526)
Q Consensus 191 IrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK-~qKV~L~VS--~dG-IrVVD~kTKelL~s~pI~rISFCA~---D~ 263 (526)
+.+|+|||+..|+.|+++..+.++|..++++.+. +.+|+|.|. ++| |+|+|+.|+.+|.+|+|++|+||+. |.
T Consensus 3 f~~vtYLGct~V~aP~sE~e~~r~m~~l~~~s~~~~i~Vtl~Vp~~seG~V~l~D~~t~~~ias~~I~rI~fC~rG~~~t 82 (125)
T cd01211 3 FTNVTYLGCSQLVNPDSENEMKRLMKVLDEQSGAQTINVTLVVPNNIEGTVKLIDAQSNKVIASFSIVNIRFCIRGESST 82 (125)
T ss_pred ccCcEEeeeEEecCCCCHHHHHHHHHHHHhhcccCCeEEEEEecCCCCceEEEEcCCCCcEEEEEEEEEEEEEEecCCCC
Confidence 3579999999999999999999999999877766 899999995 555 9999999999999999999999998 56
Q ss_pred CCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHHHHHHHHHH
Q psy67 264 NHEKGFSYICRDGTTRRWMCHGFLALKES-GERLSHAVGCAFAACL 308 (526)
Q Consensus 264 ~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAf 308 (526)
.+.++|||...++.+..|+||||.|.+++ +..|. .+|..||
T Consensus 83 ~e~~cFAft~s~~~se~~qcHVFrC~~~eav~kil----~sF~~AF 124 (125)
T cd01211 83 SENNCFAFTFTHKISILFQCHVFRCSIAEAVAKAL----YSFSYAF 124 (125)
T ss_pred cccccEEEEeecCCceEEEEEEEecCCHHHHHHHH----HHHHHhh
Confidence 66789999999999999999999998763 44444 4455555
No 20
>cd01272 FE65_N Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor protein-binding. It contains an N-terminal WW domain followed by two PTB domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.83 E-value=3e-20 Score=168.78 Aligned_cols=123 Identities=20% Similarity=0.313 Sum_probs=105.8
Q ss_pred EEEEEEEeeeEEeecc-----CchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEE
Q psy67 166 YMFALCYLGCVEVYES-----RGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVV 240 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~-----rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVV 240 (526)
++|+|+.|||+||.++ +++.+|++||.+|.|.-+ ...+..| .|. ..+.+.|.+..+.++++
T Consensus 2 ~~faVrslGWve~~Eedl~p~~sS~avn~cI~~Ls~~~~-d~~d~~g----------~wg---eGk~~~m~L~~g~lkLi 67 (138)
T cd01272 2 IRFAVRSLGWVEIAEEDLTPEKSSKAVNKCIVDLSLGRN-DMLDVVG----------RWG---DGKDLFMDLDEGALKLI 67 (138)
T ss_pred cceeeeccceEEcchhhcCCcccHHHHHHHHHHHhcccc-ccccCcC----------ccc---CcceeEEEecCCceEee
Confidence 6899999999999998 799999999999998533 2111111 122 34789999999999999
Q ss_pred ECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHH
Q psy67 241 DDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCA 303 (526)
Q Consensus 241 D~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQA 303 (526)
|+.++.+|++|||++|.||+++.++.+-|||++++..+..|+||||.|+.+ |..|+.++..-
T Consensus 68 DP~~~s~LhSqPI~~IRvwGvGrdngrdFA~vard~~T~~~~CHVFRC~~p-ak~ia~~l~~~ 129 (138)
T cd01272 68 DPENLTVLHSQPIHTIRVWGVGRDNGRDFAYVIRDERTRGSNCHVFRCDTR-AKDIATELRRI 129 (138)
T ss_pred CCCCCceEEeeeeeEEEEEEecCCCCcceEEEeecCCCceeEEEEEEcCCC-CccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999875 99999988774
No 21
>KOG3536|consensus
Probab=99.81 E-value=3.7e-21 Score=194.21 Aligned_cols=126 Identities=23% Similarity=0.441 Sum_probs=108.8
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCC
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETK 245 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTK 245 (526)
..|.++|||++||.+++|.++++++++.+++. .+++ ++.++|.++|.|.||.+||.|.|..|+
T Consensus 47 v~y~~kflg~~ev~qpkG~~vv~~a~r~~rr~---------------~~~k--kseg~k~~kvE~~Isi~gviI~~~~T~ 109 (321)
T KOG3536|consen 47 VPYSAKFLGMTEVEQPKGTDVVREAIRAIRRT---------------NPFK--KSEGEKLQKVELSISIQGVIIRDLGTM 109 (321)
T ss_pred HHHHHHhcccccccCCCccHHHHHHHHhhhhc---------------cccc--ccccccccceeeeeccceeEEeecccc
Confidence 55777777777777777777777777666653 1111 345788999999999999999999999
Q ss_pred ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHH
Q psy67 246 GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLE 309 (526)
Q Consensus 246 elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfE 309 (526)
++++++++++||||+.|..++|+|+||+|...++.+.||+|.|.| -|++|+++|||||.+||+
T Consensus 110 ~v~~~~~l~rIs~caddk~~kR~fsfIar~~es~~hlc~~f~s~K-la~~iTltigqaFdLay~ 172 (321)
T KOG3536|consen 110 AVKHNFPLYRISYCADDKLAKRAFSFIARMTESQSHLCVAFDSLK-LADDITLTIGQAFDLAYV 172 (321)
T ss_pred cceecCChhhhhHhHhHHHHHHHHHHHHHhcccCCceEEEeehhh-hcchHHHHHHhhcchhhH
Confidence 999999999999999999999999999999888889999999987 599999999999999998
No 22
>KOG3537|consensus
Probab=99.78 E-value=3.6e-20 Score=193.74 Aligned_cols=56 Identities=75% Similarity=1.159 Sum_probs=54.1
Q ss_pred CCCcchhhhhhcchhhHHHHhhhhccccccceeeeeecCCCcccccccccCCcccc
Q psy67 465 NGDPGERLSHAVGCAFAACLERKQKRDKECGVTMNFDTTNSTFTRSGSFRQPTLTD 520 (526)
Q Consensus 465 ~~~~~~~~~~~~~c~f~~cl~~k~~r~~~~~~~~~~~~~~~~f~r~~~~~~~~~~~ 520 (526)
-+|+|||||||||||||+|||||||||||||||++||+.+++|+|+||||..+.+|
T Consensus 136 ~KdsGERLSHAVGCAFa~CLErKqRRdkEcGvt~~fda~~stftr~gSfr~~t~~~ 191 (543)
T KOG3537|consen 136 CKDSGERLSHAVGCAFAACLERKQRRDKECGVTATFDASRSTFTREGSFRLQTGTE 191 (543)
T ss_pred ecchhhHHHHHHHHHHHHHHHHHhhhhhhccceeeeeccccccccCCceeeccCCc
Confidence 35999999999999999999999999999999999999999999999999999994
No 23
>cd01269 PLX Pollux (PLX) Phosphotyrosine-binding (PTB) domain. Pollux (PLX) Phosphotyrosine-binding (PTB) domain. PLX is calmodulin-binding protein containing a TBC domain, which is conserved from yeast to man, but it only has an N-terminal PTB domain in mammals. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.76 E-value=3.2e-18 Score=154.53 Aligned_cols=121 Identities=19% Similarity=0.401 Sum_probs=99.9
Q ss_pred EEEEEEeeeEEeeccC-chhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCC
Q psy67 167 MFALCYLGCVEVYESR-GMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETK 245 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~r-g~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTK 245 (526)
-|-|-|-|.+-|...+ ...+|+|||+++++.- .+| +...++|.|.|+..+|.|+|++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~li~e~I~K~~~~~------------------~~k--r~~nrtm~~~I~~~~v~lispdtK 62 (129)
T cd01269 3 KFEVLYCGRVTVTHKKAPSSLIDDCIEKFSLHE------------------QQR--LKDNRTMLFQVGRFEINLISPDTK 62 (129)
T ss_pred eeEEEEEeeEEEeeccCChHHHHHHHHHhhhhh------------------hhh--ccCCcEEEEEEeccceEEEcCCcc
Confidence 4677777877777665 4556677777776531 111 123567999999999999999999
Q ss_pred ceeeeeecceeEEEeeCCCCCceEEEEEecCCcC---eeeEEEEEecCcc-HHHHHHHHHHHHHHH
Q psy67 246 GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTR---RWMCHGFLALKES-GERLSHAVGCAFAAC 307 (526)
Q Consensus 246 elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~---rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVA 307 (526)
.++.++++++||+|+.+.++.+.|||||++...+ .+.||||.|..++ |.+|..+|+|||.+|
T Consensus 63 ~vl~~k~f~dISsC~qg~~~~dhFgFIcrEs~~~~~~~f~CyVFqc~Se~la~eI~lti~QAF~~a 128 (129)
T cd01269 63 SVVLEKNFKDISSCSQGIKHVDHFGFICRESPEPGLSQYICYVFQCADESLVDEVMLTLKQAFSTA 128 (129)
T ss_pred eEEEecCccccchhhcCCCCcceEEEEeccCCCCCcceEEEEEEEcCCHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999997644 4999999998775 999999999999987
No 24
>cd01213 tensin Tensin Phosphotyrosine-binding (PTB) domain. Tensin Phosphotyrosine-binding (PTB) domain. Tensin is a a focal adhesion protein, which contains a C-terminal SH2 domain followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=99.68 E-value=3e-16 Score=144.28 Aligned_cols=113 Identities=20% Similarity=0.332 Sum_probs=93.2
Q ss_pred hhhceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEECCCCc-eeeeeecceeEEEeeCCCC-
Q psy67 190 ALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDDETKG-LMVDQTIEKVSFCAPDRNH- 265 (526)
Q Consensus 190 AIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~kTKe-lL~s~pI~rISFCA~D~~d- 265 (526)
+-+.+.|||+++|+..+|.+++.+||..+.+.. .++++|+|.||.+||+|+|..++. ...+||+++|+||+.|++|
T Consensus 6 aa~nv~yLgS~evesltg~~av~kAv~~~l~~~~~~~~t~vh~kVS~qGItLtDn~rk~ffrrhypl~~Vs~ca~dp~n~ 85 (138)
T cd01213 6 AACNVLYLGSVDTESLTGNEAIKKAIAQCSGQAPDPQATEVHFKVSSQGITLTDNTRKKFFRRHYKVDSVIFCAIDPEER 85 (138)
T ss_pred cccceeeeeeEeeccccCcHHHHHHHHHHHhcCCCCCceEEEEEEEcCCeeeeccccceeehhhCCcCeEEEEeeCCccc
Confidence 456788888888888899999999998887532 357899999999999999998877 4456999999999999986
Q ss_pred ----------CceEEEEEecCCc-CeeeEEEEEecCc--cHHHHHHHHHH
Q psy67 266 ----------EKGFSYICRDGTT-RRWMCHGFLALKE--SGERLSHAVGC 302 (526)
Q Consensus 266 ----------~KvFAFIARd~st-~rf~CHVF~C~K~--kAq~Ia~AIGQ 302 (526)
.++|+||+|++.. ..+.||||....+ .|.+|+.-|+.
T Consensus 86 ~~~~~~~~~~kriFgFVar~~~~~~~~~ChvF~e~~~~qpa~~iv~~~~~ 135 (138)
T cd01213 86 MWENEGAIAKARIFAFVARIPHSSTDNACHVFAELEPEQPASAIVNFANK 135 (138)
T ss_pred cccccccccccEEEEEEEecCCCCCCeeEEEeccCCCCCCHHHHHHHHHh
Confidence 5899999998765 6899999997543 38888876654
No 25
>KOG3535|consensus
Probab=99.65 E-value=4.3e-16 Score=162.80 Aligned_cols=120 Identities=25% Similarity=0.508 Sum_probs=103.9
Q ss_pred hceEecceEecccCcChHHHHHHHHHHH-------hcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCC
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLR-------NSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRN 264 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIK-------asgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~ 264 (526)
|+.|.+|--+|.+++|+.+|+++|++|| +.|.+.++++|.||.+||+|+|++|+.++|+|++++|||++.|-.
T Consensus 51 YKaKLIGiddV~~ARGDkmcqdsMmklKGvva~~rs~G~HKqrI~l~Is~~GIKI~DEKtGav~H~hpV~~ISfIArD~t 130 (557)
T KOG3535|consen 51 YKAKLIGIDDVDKARGDKMCQDSMMKLKGVVAIIRSAGAHKQRITLQISIDGIKILDEKTGAVLHNHPVSRISFIARDST 130 (557)
T ss_pred eeeeeccccccchhhhhhHHHHHHHHhhhhhhhhhccccccceEEEEEeecceEEeeccccceeccCccceeeeeecccc
Confidence 4566677777888999999999999986 356789999999999999999999999999999999999999999
Q ss_pred CCceEEEEEecCCcCeeeEEEEEecCc--cHHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 265 HEKGFSYICRDGTTRRWMCHGFLALKE--SGERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 265 d~KvFAFIARd~st~rf~CHVF~C~K~--kAq~Ia~AIGQAFkVAfErKqKRek 316 (526)
|.+.|+|||..+.. |-|...|. .|+.+...|-..|++.||.|+|.+.
T Consensus 131 D~RAFGyVcG~eG~-----hkF~aIKTaQaAep~VldlrDlFQvIye~Kkkeee 179 (557)
T KOG3535|consen 131 DARAFGYVCGEEGK-----HKFYAIKTAQAAEPAVLDLRDLFQVIYEMKKKEEE 179 (557)
T ss_pred cccceeeeecCCCc-----eeEEEEecccccchhhHhHHHHHHHHHHHHHHHHH
Confidence 99999999998743 55666554 3899999999999999997665543
No 26
>KOG3605|consensus
Probab=99.55 E-value=1.5e-15 Score=165.02 Aligned_cols=136 Identities=18% Similarity=0.316 Sum_probs=107.7
Q ss_pred HHHhhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHh------cC--------C
Q psy67 158 DALKVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRN------SR--------R 223 (526)
Q Consensus 158 ~a~~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKa------sg--------K 223 (526)
|..+.+.+++|.++|||++++..+++ ..++..|..+++||.++|. ++ +
T Consensus 442 epe~LidGvif~A~ylgsTqllse~~------------------psk~~rm~Qaqeavsrvk~~~~~~~s~~~Apegesq 503 (829)
T KOG3605|consen 442 EPEDLIDGVIFGARYLGSTQLLSERN------------------PSKAVRMMQAQEAVSRVKGGQKNAKSGKKAPEGESQ 503 (829)
T ss_pred CHHHhhhhheeecccccccccccCCC------------------CcHHHHHHHHHHHHhhhccccccccccccCCCCCCC
Confidence 35567889999999999999988865 3455678889999999972 11 2
Q ss_pred CCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEE---------EEEec--------CCcCeeeEEEE
Q psy67 224 RPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFS---------YICRD--------GTTRRWMCHGF 286 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFA---------FIARd--------~st~rf~CHVF 286 (526)
..+.|.|+||+++|+|++.++++++|+|+++.|||.+...+-..+++ -+|-+ .++.++.||||
T Consensus 504 p~tevdlfist~ri~VLnadlqe~mmdhaLrtisyiadIg~lvvlMarrr~~~~s~~~~~~~~~~~~~~~rtpKMICHVF 583 (829)
T KOG3605|consen 504 PMTEVDLFISTQRIKVLNADLQETMMDHALRTISYIADIGNVVVLMARRRDVRSSSEDCSEDIDPAQKGNRTPKMICHVF 583 (829)
T ss_pred cceeeeeeeecceeEEEechhHHhhhhhhhhhhHHHhhhhHHHHHHHHhhcccccccccCCCCCcccccCCCcceEEEEe
Confidence 36899999999999999999999999999999999997544322221 11221 13578999999
Q ss_pred EecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 287 LALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 287 ~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
.++ .||-|+++|||||++||.+.-|
T Consensus 584 ESd--eAQfIAQSIGQAFqVAY~EFLr 608 (829)
T KOG3605|consen 584 ESD--EAQFIAQSIGQAFQVAYMEFLR 608 (829)
T ss_pred ccc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 996 5999999999999999997543
No 27
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 (IPR000980 from INTERPRO) domain and a region similar to the tumour suppressor PTEN []. The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif []. ; GO: 0005515 protein binding; PDB: 3HQC_A 2DKQ_A 2LOZ_A 2CY5_A 2CY4_A 2GJY_A 1WVH_A.
Probab=99.54 E-value=7.9e-14 Score=126.64 Aligned_cols=116 Identities=22% Similarity=0.308 Sum_probs=92.5
Q ss_pred ceEecceEecccCcChHHHHHHHHHHH---hcC-CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCC--
Q psy67 193 VLRYLGCVEVYESRGMQVCEDALKVLR---NSR-RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHE-- 266 (526)
Q Consensus 193 qLKYLGsVeV~e~rG~qV~eeAVkrIK---asg-KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~-- 266 (526)
.+.||+++.++...|...+++||.+++ +.+ -+++.|.|.|+.+||+|+|..++..+.+||+..|+||+.|+++.
T Consensus 3 ~V~hL~T~~~e~~~g~~~v~d~i~~l~~l~~~~~~w~q~~~lkV~~~~v~L~D~~~k~~le~yPl~~I~~c~~~~~~~~~ 82 (131)
T PF08416_consen 3 NVEHLATFDVESLTGPQAVEDAIRRLKLLEAKGRIWPQEMHLKVSDQGVTLTDIETKEFLEHYPLSSIQFCGADPDSRRY 82 (131)
T ss_dssp EEEEEEEEEECTTSCCCHHHHHHHHHHHHHCSS-SS-EEEEEEEETTEEEEEESSTSSECEEEECCCEEEEEEETTTTEE
T ss_pred EEEEEEEEEcCCCcchhhHHHHHHHHHhhccCCCcccEEEEEEEeCCeEEEEECcccchhhhCCHhHeeeccccCCCCcc
Confidence 455666666666666666777766654 233 35899999999999999999999999999999999999988765
Q ss_pred -ceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHH
Q psy67 267 -KGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACL 308 (526)
Q Consensus 267 -KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAf 308 (526)
.+|+|++++.......+|+|.|+.-.|+.++.+|-.|.....
T Consensus 83 ~~il~fV~r~~~~~~~~~H~Fqc~ev~a~~~~~~I~~~v~~~~ 125 (131)
T PF08416_consen 83 NSILGFVVRKPGSSKPNVHLFQCEEVDAEQPAEDIVSAVSKVK 125 (131)
T ss_dssp CBEEEEEEEETTCCCEEEEEEEETCTCTTSHHHHHHHHHHHHC
T ss_pred ceEEEEEEecCCCCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 499999999877778889999976668888888887775443
No 28
>KOG3775|consensus
Probab=99.52 E-value=2.2e-14 Score=148.72 Aligned_cols=191 Identities=23% Similarity=0.256 Sum_probs=142.8
Q ss_pred ccCccceeeeecc--cCCC-Cccccc--ccchhcccceeeeeccccchhhHH-HHhhheeEEEEEEEeeeEEeeccC-ch
Q psy67 112 KQGEEHSVFMRFG--YRPS-GDVLHL--SASAFKYLGCVEVYESRGMQVCED-ALKVVLIYMFALCYLGCVEVYESR-GM 184 (526)
Q Consensus 112 ~~~~~~~~~~~~~--~~~~-~~~l~~--~~~~~~~~g~~ev~es~g~~~c~~-a~~~l~~~~FaVkYLGsvEV~e~r-g~ 184 (526)
-+|||.-+|-|-- |-|- -|.|+| +.++ -|.--.-++||+. +++.=-..+|.+-|.=-+...++- --
T Consensus 256 ~~~e~qe~THR~~~rFvPRHpDELeLEIgDav-------~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~eed~lg 328 (482)
T KOG3775|consen 256 VNGEEQEQTHRAVFRFVPRHPDELELEIGDAV-------LVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEEDLLG 328 (482)
T ss_pred cchhhhchhhhhhhhccCCCcceeeeecCCee-------EeeecccchhhccccccccccccccceeEEecCCchhhhhh
Confidence 4688888877643 3332 233333 2221 1233345789999 777777788888887443333331 11
Q ss_pred hhHHh---hhhceEecceEecccCcChHHHHHHHHHHHhcC------CCCcEEEEEEECCeEEEEECCCCc------eee
Q psy67 185 QVCED---ALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR------RRPVRAILYVSGDGLRVVDDETKG------LMV 249 (526)
Q Consensus 185 qVV~e---AIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg------KK~qKV~L~VS~dGIrVVD~kTKe------lL~ 249 (526)
..... --+-|+|||+|+|...+|+.|..+||+||.... ..++.+.|.||..||++.+...+. .-+
T Consensus 329 ~l~~~~~~erf~l~~LgSVEv~~HKGngVlcqAm~KI~t~ykns~~~~~p~s~~lEislRgV~~s~k~~~~~~k~~~c~~ 408 (482)
T KOG3775|consen 329 SLRSPCWVERFDLQFLGSVEVPCHKGNGVLCQAMQKIATAYKNSVHLRPPASCVLEISLRGVKLSLKGGGPEFKFQRCSH 408 (482)
T ss_pred ccCCccchhheeeeeeeeeEeecccCccHHHHHHHHHHHHhcCCccccCcchhhhhhhcceeEeecCCCCccccccccce
Confidence 11122 235799999999999999999999999995433 346789999999999999876543 356
Q ss_pred eeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 250 DQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 250 s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
.+.+++||||+.++.+.++|+||.+++...+|.||||.+.- .-..++.+||.||+.-|+.
T Consensus 409 f~~lknisfc~~hpr~n~~~gfitkhp~~~rfachVfks~e-s~rpvA~sVgRaF~~~yq~ 468 (482)
T KOG3775|consen 409 FFQLKNISFCGCHPRNNCYFGFITKHPLLSRFACHVFKSQE-STRPVAESVGRAFQEFYQE 468 (482)
T ss_pred eeEecccceeccccccceEEEeeccchhhhheeeeeeeccc-CChHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999863 5888999999999999884
No 29
>KOG1930|consensus
Probab=99.18 E-value=8e-11 Score=123.87 Aligned_cols=125 Identities=24% Similarity=0.357 Sum_probs=97.7
Q ss_pred HhhhhceEecceEecccCcChHHHHHHHHHHHhcCC--CCcEEEEEEECCeEEEEECCCCce-eeeeecceeEEEeeCCC
Q psy67 188 EDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRR--RPVRAILYVSGDGLRVVDDETKGL-MVDQTIEKVSFCAPDRN 264 (526)
Q Consensus 188 ~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgK--K~qKV~L~VS~dGIrVVD~kTKel-L~s~pI~rISFCA~D~~ 264 (526)
..|-+++.|||+|+|+.-+|.++++.|...-++... ..+.|++.||.+||+|.|...|.. ..+|++..|.||+.|+.
T Consensus 343 qGAACnVlyl~SVd~ESLTG~~av~kAt~~~~~~~p~p~~tvVHFKVSsQGITLTDNqRK~FFRRHypv~sv~Fc~mDPq 422 (483)
T KOG1930|consen 343 QGAACNVLYLGSVDVESLTGNEAVQKATSSQRAINPTPRATVVHFKVSSQGITLTDNQRKVFFRRHYPVNSVIFCGMDPQ 422 (483)
T ss_pred hCccceEEEEeeeeccccccHHHHHHHHHHHhhcCCCCCceEEEEEEeccceeeeccchhhheecccccceeEEecCChH
Confidence 567789999999999999999999998766554433 458999999999999999988764 45789999999998865
Q ss_pred C-----------CceEEEEEecC-CcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 265 H-----------EKGFSYICRDG-TTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 265 d-----------~KvFAFIARd~-st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
+ .++|+||+|.+ +.....||+|..... -|.-+..|+..-++++..++|
T Consensus 423 ~R~w~~~g~~~~s~iFgFVAr~~gS~teN~CHlFAEldp-~QPasAIVnFi~kvml~~~~r 482 (483)
T KOG1930|consen 423 ERRWTNTGCGAQSKIFGFVARKPGSSTENVCHLFAELDP-EQPASAIVNFINKVMLAQKNR 482 (483)
T ss_pred HhccccCCCCCcceEEEEEeccCCCCcccceeeeeccCc-cCchHHHHHHHHHHhhccccc
Confidence 4 47999999976 567789999998654 333333345555666655443
No 30
>KOG3697|consensus
Probab=99.12 E-value=3.6e-11 Score=121.84 Aligned_cols=141 Identities=21% Similarity=0.350 Sum_probs=102.1
Q ss_pred eeEEEEEEEeeeEEeeccC-------chhhHHhhhhceEecceEecccCcChHHH---HHHHHHHHhc---CCCCcEEEE
Q psy67 164 LIYMFALCYLGCVEVYESR-------GMQVCEDALKVLRYLGCVEVYESRGMQVC---EDALKVLRNS---RRRPVRAIL 230 (526)
Q Consensus 164 ~~~~FaVkYLGsvEV~e~r-------g~qVV~eAIrqLKYLGsVeV~e~rG~qV~---eeAVkrIKas---gKK~qKV~L 230 (526)
.++.|.|+||||+||.++. .+|+..+||..+.- .|...+|.-.. ..-+..|... ..-...++|
T Consensus 15 ~GVs~~v~YlGcVeV~~Sm~~ldf~trtq~~re~is~vce----av~g~kgat~rR~~n~~~s~i~gr~~lq~a~m~I~i 90 (345)
T KOG3697|consen 15 PGVSYSVTYLGCVEVLESMNVLDFNTRTQMTREAISRVCE----AVPGAKGATKRRPINPVLSSILGRSNLQFAGMSITL 90 (345)
T ss_pred CCceEEEEEeeeehHHhhhhhhhhccHHHHHHHHHHHHHH----hccccccccccCCCcccchhhcCccccccCCcceEE
Confidence 4889999999999999884 23555666643321 12222221111 1111122110 112578999
Q ss_pred EEECCeEEEEECCCCceeeeeecceeEEEee-CCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHH
Q psy67 231 YVSGDGLRVVDDETKGLMVDQTIEKVSFCAP-DRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLE 309 (526)
Q Consensus 231 ~VS~dGIrVVD~kTKelL~s~pI~rISFCA~-D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfE 309 (526)
+||...|.+....+|+++.+|.+..|||... |.+-....+||++|+. ++-.||||.|...+|+.+..+||+||+.-|+
T Consensus 91 tvst~sL~l~~~d~kqiianh~m~~isfasGgD~Dt~~~~ayvaKD~~-~rRac~Vlec~~g~a~DVI~Tigqaf~lrfk 169 (345)
T KOG3697|consen 91 TISTSSLNLMTADCKQIIANHHMQSISFASGGDPDTADYVAYVAKDPV-NRRACHILECCDGLAQDVIGTIGQAFELRFK 169 (345)
T ss_pred EeehhhhhhhhhHhhhhhhhccccccccccCCCchhhhHHhhhccCcc-ccceeEEEeccCchhHHHHHhhhhhheeecc
Confidence 9999999999999999999999999999864 6666678899999985 5559999999877899999999999998877
No 31
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=98.79 E-value=4.8e-08 Score=94.44 Aligned_cols=84 Identities=15% Similarity=0.269 Sum_probs=71.7
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEee--CCC--CCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAP--DRN--HEKGFSYICRDGTTRRWMCHGFLALKES-GERLSHAV 300 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~--D~~--d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AI 300 (526)
.+|+|.||..||+|.|.+...+++.||++.|--|.. |.- -..+||.=..+.....+.||||+|.... |+.||..|
T Consensus 108 eevil~VSKyGiKvt~~d~~~VL~RhpL~~Ivr~V~YdDGlG~g~~llAlK~~~~~~e~y~l~v~Qcss~~qA~~ICk~l 187 (200)
T PF10480_consen 108 EEVILSVSKYGIKVTDNDQRDVLHRHPLHEIVRMVCYDDGLGAGKNLLALKVGDERQEEYQLWVYQCSSDEQAQEICKVL 187 (200)
T ss_pred CeEEEEEeeccEEEeecCCcceeeeeeeeeEEEEEEEecCcCCcceEEEEEccCCCcceEEEEEEEcCCHHHHHHHHHHH
Confidence 588999999999999999999999999999986543 332 3458887777777788999999998874 99999999
Q ss_pred HHHHHHHHH
Q psy67 301 GCAFAACLE 309 (526)
Q Consensus 301 GQAFkVAfE 309 (526)
++||..++-
T Consensus 188 ~~aF~~v~t 196 (200)
T PF10480_consen 188 GQAFDSVLT 196 (200)
T ss_pred HHHHHHhhc
Confidence 999999875
No 32
>cd01210 EPS8 Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. Epidermal growth factor receptor kinase substrate (EPS8) Phosphotyrosine-binding (PTB) domain. EPS8 is a regulator of Rac signaling. It consists of a PTB and an SH3 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.72 E-value=4.7e-08 Score=89.39 Aligned_cols=117 Identities=18% Similarity=0.150 Sum_probs=91.7
Q ss_pred EEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcC-CCCcEEEEEEECCeEEEEECCCCc
Q psy67 168 FALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR-RRPVRAILYVSGDGLRVVDDETKG 246 (526)
Q Consensus 168 FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg-KK~qKV~L~VS~dGIrVVD~kTKe 246 (526)
|.|..|-..+|....+..-++|||++|+.+ + +.| -+.+++.|.|..+-|.++|..||+
T Consensus 4 y~veHL~Tf~l~~~~~~~~~~D~i~kL~~l---------------e------~~G~iW~Q~m~lqv~~~~v~LlD~etk~ 62 (127)
T cd01210 4 YLVEHLATFTVGKQSGVVYPEDAMRKLLQM---------------D------KQGRVWSQKMILRVRYQWVTLLDYETKE 62 (127)
T ss_pred eeeeeeEEEEEcCccCcCCHHHHHHHHHHH---------------H------hcCCccccceEEEEcCCeEEEEcCCCcC
Confidence 566666666666555555555555554432 1 222 367999999999999999999999
Q ss_pred eeeeeecceeEEEeeCC---CCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHH
Q psy67 247 LMVDQTIEKVSFCAPDR---NHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFA 305 (526)
Q Consensus 247 lL~s~pI~rISFCA~D~---~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFk 305 (526)
.+.+||+..|..|.+.. ....+..|+++++..++-.-|+|+|+.-.|+.|...|.+|.+
T Consensus 63 elE~fpl~~I~~~~a~~~~~~ynslL~~vvq~~~~~~~e~hlFQc~~v~A~~i~~DL~~a~~ 124 (127)
T cd01210 63 ELESYPLSLIQEPTAFTSMELYNSILLFVVQEPGGSRTEMHIFQCQRVGAEHLVEDLQQALS 124 (127)
T ss_pred hhhcCCHhhccccceecCCCCcCceEEEEEeCCCCCCCcEEEEEeccccHHHHHHHHHHHHh
Confidence 99999999999998643 345789999999988888999999997789999999988864
No 33
>KOG4448|consensus
Probab=98.62 E-value=2.3e-07 Score=95.74 Aligned_cols=119 Identities=20% Similarity=0.308 Sum_probs=98.8
Q ss_pred hhhhceEecceEecccCcChHHHHHHHHHHHh---cC-CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCC
Q psy67 189 DALKVLRYLGCVEVYESRGMQVCEDALKVLRN---SR-RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRN 264 (526)
Q Consensus 189 eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKa---sg-KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~ 264 (526)
+--+.+-|||.+...-.+|+.+.+.++..||. +. ++...+.|.|+..||+++.... -++.|..++|.||..+..
T Consensus 60 dp~y~V~ylgnalti~argegc~ek~ls~iw~~~t~~~r~~~~M~Lkv~asglk~~h~qe--~l~ly~ahrityc~a~~~ 137 (374)
T KOG4448|consen 60 DPPYVVFYLGNALTICARGEGCKEKTLSGIWHFYTMLKRKDNVMTLKVEASGLKAFHEQE--GLTLYWAHRITYCRAPSG 137 (374)
T ss_pred CCCeEEEEecceeEEEecCCCcchhhhhhHHHHHHhhcccCceeEEEEecccceeeeccC--cceeeeeeeeeeeecCCC
Confidence 34467888888888889999999999999973 33 5678999999999999998754 578899999999999999
Q ss_pred CCceEEEEEecCC---cCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHH
Q psy67 265 HEKGFSYICRDGT---TRRWMCHGFLALKES-GERLSHAVGCAFAACLE 309 (526)
Q Consensus 265 d~KvFAFIARd~s---t~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfE 309 (526)
.+++|++|.++.. ...+.||...|.+++ |++|...+-+-...|++
T Consensus 138 ~pkvf~wiyrhegk~~~~~lrchaVL~sk~k~aqai~d~l~~n~~~aLr 186 (374)
T KOG4448|consen 138 YPKVFCWIYRHEGKQLKSELRCHAVLCSKKKHAQAIEDVLPANLLLALR 186 (374)
T ss_pred CCeEEEEEEecchhhhhhccceeeeeecchhhhhHHHHHHHHHHHHHHH
Confidence 9999999999754 356899999999875 88888777665555554
No 34
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.42 E-value=2.1e-06 Score=80.52 Aligned_cols=86 Identities=24% Similarity=0.398 Sum_probs=64.8
Q ss_pred cChHHHHHHHHHHH----hcCCCCcEEEEEEECCeEEEEECCCCc--eeeeeecceeEEEee------C-----------
Q psy67 206 RGMQVCEDALKVLR----NSRRRPVRAILYVSGDGLRVVDDETKG--LMVDQTIEKVSFCAP------D----------- 262 (526)
Q Consensus 206 rG~qV~eeAVkrIK----asgKK~qKV~L~VS~dGIrVVD~kTKe--lL~s~pI~rISFCA~------D----------- 262 (526)
+|-+-+++.++.|. +.++|...-.|.|+..||+|--....+ .-.-+||++|-||++ +
T Consensus 19 ~sLqgiQEPLr~LY~se~~~~kKl~~gsL~Ics~GLrvk~s~~~~~~E~~~fP~~~i~~~aAVkfVi~~~~~~~~~~~aF 98 (158)
T cd01217 19 DGLQGIQEPLRQLYPSEVTPKKKGIDSWLSVWSNGLLLEISALAEKNETLFFPIHNLHYCAAVRFVISDGFKVDDGGAAF 98 (158)
T ss_pred chhhhhhhHHHHhhhhccccccccccceEEEecCceEEEeccccccccccccccceeeEeeEEEEEeccCcccCCCcccc
Confidence 45555666666653 125678889999999999998765432 335689999999997 4
Q ss_pred ------------CCCCceEEEEEecCC-cCeeeEEEEEecCc
Q psy67 263 ------------RNHEKGFSYICRDGT-TRRWMCHGFLALKE 291 (526)
Q Consensus 263 ------------~~d~KvFAFIARd~s-t~rf~CHVF~C~K~ 291 (526)
..|+-+||-|.|..+ ...++||.|.|.+.
T Consensus 99 LPL~t~~~ni~~~~H~PiFA~vmR~t~~~kvLECHgFiCk~~ 140 (158)
T cd01217 99 LPLDSPFANIPIHVHPPIFAAIMRRTTGPKVLECHGFICKST 140 (158)
T ss_pred cccCCChhhCCCcCCCCeEEEEEecCCCCceEEeeEEEeCCH
Confidence 457789999999765 46799999999875
No 35
>cd01268 Numb Numb Phosphotyrosine-binding (PTB) domain. Numb Phosphotyrosine-binding (PTB) domain. Numb is a membrane associated adaptor protein, which is a determinant of asymmetric cell division. Numb has an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=98.07 E-value=1.2e-06 Score=81.16 Aligned_cols=44 Identities=73% Similarity=1.127 Sum_probs=42.4
Q ss_pred ccccchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccchhhHHHHhhhee
Q psy67 87 QWQSDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQVCEDALKVVLI 165 (526)
Q Consensus 87 ~w~~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~~~l~~ 165 (526)
|||.||++|+.|.|+|.|| |||++||.+++|+++|.+|++.|+.
T Consensus 1 ~W~~~~~~~~~g~~~f~vK-----------------------------------yLG~veV~~~rG~~v~~~A~~klk~ 44 (138)
T cd01268 1 QWQTDEEAVRTGTCSFPVK-----------------------------------YLGHVEVDESRGMQVCEDALKRLKA 44 (138)
T ss_pred CCcCCHHHHhcCceeEEeE-----------------------------------ecceEEccCcCCChHHHHHHHHHHh
Confidence 8999999999999999999 9999999999999999999999864
No 36
>KOG3557|consensus
Probab=97.55 E-value=0.00029 Score=78.51 Aligned_cols=121 Identities=20% Similarity=0.148 Sum_probs=97.3
Q ss_pred cceEecccCcChHHHHHHHHHHHhc----CCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCC---CCceE
Q psy67 197 LGCVEVYESRGMQVCEDALKVLRNS----RRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRN---HEKGF 269 (526)
Q Consensus 197 LGsVeV~e~rG~qV~eeAVkrIKas----gKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~---d~KvF 269 (526)
|-..-+.++.|+.-.++|+.+|... +-+.+++.|.|..+-+.++|.+|++.+.+|++..|-+|++.-+ ...+.
T Consensus 53 L~Tf~~~ksd~i~~~eD~~rkL~~ld~~~~vWsQ~miLqv~d~~v~llD~Es~~ele~fpl~~iq~~~a~~~~~~y~siL 132 (721)
T KOG3557|consen 53 LATFILGKSDGITGPEDAIRKLLQLDAQGGVWSQDMILQVDDQWVLLLDIETKEELESFPLSTIQRPQAVLNMCSYNSIL 132 (721)
T ss_pred hhheecccccccccHHHHhHHHHhhccccccccccceeEeccCceeeechhhhHHHhhcCcchhhhhhhhcccccccchh
Confidence 3333445566666677777777532 3357999999999999999999999999999999999987433 44578
Q ss_pred EEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy67 270 SYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRDKE 317 (526)
Q Consensus 270 AFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKReke 317 (526)
++||.++...+..-|+|.|+...|+.|...|-+|.+-...-++++..+
T Consensus 133 ~lv~qep~~~r~d~h~Fq~~ev~Aell~edi~~al~~~~~~~~~~r~~ 180 (721)
T KOG3557|consen 133 SLVVQEPGRSRPDVHIFQCQEVGAELLREDIQGALSNYRSGRQERRAQ 180 (721)
T ss_pred heeeccCCCCCCceeEEeeccchhHHHHHhHHHHHhhhhcccccCchh
Confidence 999999999999999999998789999999999998777766544443
No 37
>cd01274 AIDA-1b AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b Phosphotyrosine-binding (PTB) domain. AIDA-1b is an amyloid-beta precursor protein interacting protein. It consists of ankyrin repeats, a SAM domain and a C-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=96.69 E-value=0.0088 Score=54.73 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=29.6
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEec
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYL 197 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYL 197 (526)
+.|.|+|||++||.+++|++++.+||+++++.
T Consensus 2 v~f~akyLGs~eV~~~~G~~~~~~Am~kik~~ 33 (127)
T cd01274 2 VVYRAHYLGSLEIGELEGTDSTHAAMTKIKES 33 (127)
T ss_pred cEEEEEccceEEccCCCCcHHHHHHHHHHHHh
Confidence 47999999999999999999999999999864
No 38
>cd01215 Dab Disabled (Dab) Phosphotyrosine-binding domain. Disabled (Dab) Phosphotyrosine-binding domain. Dab is a cystosolic adaptor protein, which binds to the cytoplasmic tails of lipoprotein receptors, such as ApoER2 and VLDLR, via its PTB domain. The dab PTB domain has a preference for unphosphorylated tyrosine within an NPxY motif. Additionally, the Dab PTB domain, which is structurally similar to PH domains, binds to phosphatidlyinositol phosphate 4,5 bisphosphate in a manner characteristic of phosphoinositide binding PH domains.
Probab=96.59 E-value=0.0026 Score=59.52 Aligned_cols=40 Identities=25% Similarity=0.449 Sum_probs=36.4
Q ss_pred cchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccchhhHHHHhhhe
Q psy67 90 SDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQVCEDALKVVL 164 (526)
Q Consensus 90 ~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~~~l~ 164 (526)
+|-.+.+..-+.|+|| |||++||.|++|+..|++|++.|+
T Consensus 3 ~~~~~f~g~gv~f~aK-----------------------------------ylG~~eV~e~RG~~v~~~Ai~klk 42 (139)
T cd01215 3 SDPFRFQGNGVSYKAK-----------------------------------LIGIQEVDKARGDAMCAEAMRKAK 42 (139)
T ss_pred CCcceeeCCcEEEEEE-----------------------------------ecccEecccCCchHHHHHHHHHHH
Confidence 5667778888999999 999999999999999999999886
No 39
>cd01212 JIP JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JNK-interacting protein (JIP) Phosphotyrosine-binding (PTB) domain. JIP is a mitogen-activated protein kinase scaffold protein. JIP consists of a C-terminal SH3 domain, followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=96.54 E-value=0.0013 Score=61.70 Aligned_cols=111 Identities=16% Similarity=0.223 Sum_probs=72.5
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCC------
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNH------ 265 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d------ 265 (526)
+.++|||+++|.+++|++++.+||++|+...+... .-.+.+.++.....+-|...-.....
T Consensus 5 f~vkyLGsveV~~~kG~~v~~~A~rki~~~~k~~~-------------~~~~~~~v~L~VS~~Girl~D~~t~~~~~~~~ 71 (148)
T cd01212 5 FLLGYLGSVEVLAHKGNGVLCQAMRKIVGEYKNSE-------------ESPTPQTCILEISDRGLRMVDRSGPNKDKKPC 71 (148)
T ss_pred EEeEecceEEecCCCCcHHHHHHHHHHHHHHHhhc-------------cCCCCcEEEEEEecCcEEEEecCCCcccccch
Confidence 56999999999999999999999999986543210 01122344555556666665432211
Q ss_pred ------CceEEEEEecCCcCeeeEEEEEecCc----------cHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy67 266 ------EKGFSYICRDGTTRRWMCHGFLALKE----------SGERLSHAVGCAFAACLERKQKRDKE 317 (526)
Q Consensus 266 ------~KvFAFIARd~st~rf~CHVF~C~K~----------kAq~Ia~AIGQAFkVAfErKqKReke 317 (526)
-+-.+|-+-|+...++ ..|.+..+ .+..-+.-|..|.-.||+.--++-.+
T Consensus 72 ~~~f~~l~nISFCa~d~~~~r~--F~FIak~~~~~~~~CHVF~s~~~~~~I~~aIG~AF~~~y~~~~~ 137 (148)
T cd01212 72 IDFFYSLKNISFCGFHPRDHRY--FGFITKHPLLQRFACHVFKSSESTRPVAEAVGRAFQRFYQEFIA 137 (148)
T ss_pred hhccccccceEEEEEcCCCCcE--EEEEeccCCCCceEEEEEEeCCcchHHHHHHHHHHHHHHHHHHh
Confidence 2234677777766654 44444322 26667888999999999987766555
No 40
>cd01267 CED6_AIDA1b Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=96.54 E-value=0.0017 Score=58.76 Aligned_cols=110 Identities=16% Similarity=0.210 Sum_probs=71.4
Q ss_pred hhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCC-----
Q psy67 191 LKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNH----- 265 (526)
Q Consensus 191 IrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d----- 265 (526)
.+.++|||+++|.+++|++++.+||++|+...+-. . .++ .+..++.......-|..+......
T Consensus 3 ~f~vkyLGs~~V~~~~g~~~~~~Ai~~l~~~~~~~-~------~~~-----~k~~~V~L~IS~~gi~i~d~~t~~~l~~~ 70 (132)
T cd01267 3 VYRAKFLGSLEIGKLKGTEVAREAIRKLKFSRILK-T------AEW-----EKIPKVELDISIKGVKIIDPKTKTVLHGH 70 (132)
T ss_pred EEEEEEEEEEEecCCCChHHHHHHHHHHHhhhhcc-h------hcc-----CCCCeEEEEEEcCcEEEEeCCCCcEEEEc
Confidence 47899999999999999999999999998653211 0 000 122345555566666666443321
Q ss_pred -CceEEEEEecCCcCeeeEEEEEecC--------cc--HHHHHHHHHHHHHHHHHHhh
Q psy67 266 -EKGFSYICRDGTTRRWMCHGFLALK--------ES--GERLSHAVGCAFAACLERKQ 312 (526)
Q Consensus 266 -~KvFAFIARd~st~rf~CHVF~C~K--------~k--Aq~Ia~AIGQAFkVAfErKq 312 (526)
-.-.+|++.|+...++.+++-.-.. -. -..++..|..++..||+...
T Consensus 71 ~i~~ISfc~~d~~~~~~FafIa~~~~~~~~~ChvF~~~~~~~A~~I~~tig~AF~~ay 128 (132)
T cd01267 71 PLYNISCCAQDKEDLRFFAFIAKDTETNKHYCHVFCSEKLGLAEEIILTIGQAFELAY 128 (132)
T ss_pred ccceEEEEecCCCCCeEEEEEEecCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 1234899988766665555543322 11 23569999999999998643
No 41
>cd01270 DYC-1 DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 (DYB-1 binding and Capon related) Phosphotyrosine-binding (PTB) domain. DYC-1 contains an N-terminal PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domains of both SHC and IRS-1, for example, bind to a NPXpY sequence. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=96.39 E-value=0.0017 Score=60.75 Aligned_cols=30 Identities=20% Similarity=0.180 Sum_probs=26.4
Q ss_pred cchhcccceeeeeccccchhhHHHHhhhee
Q psy67 136 ASAFKYLGCVEVYESRGMQVCEDALKVVLI 165 (526)
Q Consensus 136 ~~~~~~~g~~ev~es~g~~~c~~a~~~l~~ 165 (526)
.+-.+|||++||.++.|++.|.+|++++..
T Consensus 4 tF~vKYlG~~eV~~~~g~~~~~~A~rrir~ 33 (140)
T cd01270 4 TFEAKYVGSEEVPRPNTRAEIVAAMRRIRY 33 (140)
T ss_pred EEEEEEcceEEecCCCCcCHHHHHHHHHHH
Confidence 456789999999999999999999998754
No 42
>KOG0507|consensus
Probab=96.39 E-value=0.00056 Score=77.56 Aligned_cols=117 Identities=22% Similarity=0.308 Sum_probs=94.5
Q ss_pred EecceEecccCcChHHHHHHHHHHHhc-------CCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCc
Q psy67 195 RYLGCVEVYESRGMQVCEDALKVLRNS-------RRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEK 267 (526)
Q Consensus 195 KYLGsVeV~e~rG~qV~eeAVkrIKas-------gKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~K 267 (526)
.|+|++.+.+-+|.+..+.|..++... .++...+.|.++-+|.+.+|.+.+..+..+++.+++.-+.+..+-.
T Consensus 513 ty~nsm~i~dlr~t~ltedaeaklg~n~~~slevrk~v~ti~~s~tYkGst~Ld~d~~~~i~e~e~~ra~casp~m~ds~ 592 (854)
T KOG0507|consen 513 TYLNSMLIKDLRGTELTEDAEAKLGLNQSKSLEVRKKVPTIILSLTYKGSTFLDADNKNRIAEHEIRRASCASPDMEDST 592 (854)
T ss_pred hhhcchhhhhcccccccchhhhhccccccchHHHHhhccchhhheeecCccccchhcccCCCCCCCCcccccCCCchhhh
Confidence 357777777777777777777666321 1234455788899999999999999999999999998889999888
Q ss_pred eEEEEEecCCcCeeeEEEEEecCcc-HHHHHHHHHHHHHHHHHHh
Q psy67 268 GFSYICRDGTTRRWMCHGFLALKES-GERLSHAVGCAFAACLERK 311 (526)
Q Consensus 268 vFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfErK 311 (526)
.|+||.++-.++.++||+|.-.... .-++..+++|+|.++|+-.
T Consensus 593 ~s~~~tk~l~~qh~yg~~~ed~sv~l~~~ei~T~~q~~s~e~~~~ 637 (854)
T KOG0507|consen 593 TSAYITKDLANQHHYGHVFEDFSVNLIYEEILTLGQAFSVEYQLA 637 (854)
T ss_pred HHHHHHHhhccccccccccccccccccchhhhhcccccccccchh
Confidence 9999999988899999999976543 6778889999999999843
No 43
>cd01271 Fe65_C Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 C-terminal Phosphotyrosine-binding (PTB) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=96.35 E-value=0.0021 Score=59.08 Aligned_cols=33 Identities=27% Similarity=0.444 Sum_probs=30.1
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEecc
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYLG 198 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLG 198 (526)
+.|.|+|||+++|.+++||+++++||+.|+.-+
T Consensus 2 ~~f~~~yLG~~~V~~p~Gmdvln~AI~~l~~~~ 34 (124)
T cd01271 2 KVFRVQYLGMLPVDKPTGMEILNSAIDNLMSSS 34 (124)
T ss_pred cEEEEEEeccEeecCCccHHHHHHHHHHHHhcC
Confidence 579999999999999999999999999987544
No 44
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=96.31 E-value=0.04 Score=43.23 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=57.1
Q ss_pred CCCcEEEEEEECCeEEEEECCCCceee--eeecceeEEEeeCCC---CCceEEEEEecCCcCeeeEEEEEecCc-cHHHH
Q psy67 223 RRPVRAILYVSGDGLRVVDDETKGLMV--DQTIEKVSFCAPDRN---HEKGFSYICRDGTTRRWMCHGFLALKE-SGERL 296 (526)
Q Consensus 223 KK~qKV~L~VS~dGIrVVD~kTKelL~--s~pI~rISFCA~D~~---d~KvFAFIARd~st~rf~CHVF~C~K~-kAq~I 296 (526)
...++..+.|+...|.+.+.+...... .+++..|. |..+.. .+.+|.++..++ ...||+|.|++. .++..
T Consensus 17 ~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~-v~~~~~~~~~~~~F~i~~~~~---~~~~~~~~~~~~~~~~~W 92 (99)
T cd00900 17 KRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEIS-VEEDPDGSDDPNCFAIVTKDR---GRRVFVFQADSEEEAQEW 92 (99)
T ss_pred cCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceE-EEECCCCCCCCceEEEECCCC---CcEEEEEEcCCHHHHHHH
Confidence 467899999999999999999876665 78999999 766553 467888887764 347999999875 25555
Q ss_pred HHHHH
Q psy67 297 SHAVG 301 (526)
Q Consensus 297 a~AIG 301 (526)
..+|.
T Consensus 93 ~~al~ 97 (99)
T cd00900 93 VEALQ 97 (99)
T ss_pred HHHHh
Confidence 55443
No 45
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=96.23 E-value=0.054 Score=47.75 Aligned_cols=126 Identities=18% Similarity=0.267 Sum_probs=69.6
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChH--HHHHHHHHHHhcCCCCcEEEEEEECCeEEEEEC
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQ--VCEDALKVLRNSRRRPVRAILYVSGDGLRVVDD 242 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~q--V~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~ 242 (526)
+..|.|+|||+++|.+++|++++.+||.+|+............+. +.... |+-.......+.......-|...-.
T Consensus 3 ~~~f~v~YLGs~~v~~~~g~~~~~~ai~~l~~~~~~~~~~~~~v~l~vs~~g---v~v~~~~~~~~l~~~~l~~Isf~~~ 79 (134)
T smart00462 3 GVSFRVKYLGSVEVPEARGLQVVQEAIRKLRAAQGSEKKEPQKVILSISSRG---VKLIDEDTKAVLHEHPLRRISFCAV 79 (134)
T ss_pred ceEEEEEEEEEEEecCCCCcHHHHHHHHHHHHhhhhccCCCCEEEEEEECCc---EEEEECCCCeEEEEccccceEEEec
Confidence 468999999999999999999999999999863100000000000 00000 0000011122333333344433333
Q ss_pred CCCceeeeeecceeEEEeeCCCCCc--eEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHh
Q psy67 243 ETKGLMVDQTIEKVSFCAPDRNHEK--GFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERK 311 (526)
Q Consensus 243 kTKelL~s~pI~rISFCA~D~~d~K--vFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErK 311 (526)
..+ .-+-..|.+.+..+.. ++.|.|.... .+-+..|.++...||+....++
T Consensus 80 ~~~------~~~~F~fI~~~~~~~~~~CHvF~c~~~a------------~~i~~~i~~aF~~a~~~~~~~~ 132 (134)
T smart00462 80 GPD------DLDVFGYIARDPGSSRFACHVFRCEKAA------------EDIALAIGQAFQLAYELKLKAR 132 (134)
T ss_pred CCC------CCcEEEEEeeCCCCCeEEEEEEEcCchH------------HHHHHHHHHHHHHHHHHHHhhc
Confidence 221 1245578887776643 5555555421 3457889999989998877654
No 46
>cd01216 Fe65 Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 Phosphotyrosine-binding (PTB) domain, phosphotyrosine-interaction (PI) domain. Fe65 is an amyloid beta A4 precursor (APP) protein-binding. It contains an N-terminal WW domain followed by two PTB domains. The C-terminal PTB domain is responsible for APP binding. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=95.69 E-value=0.0095 Score=54.24 Aligned_cols=101 Identities=23% Similarity=0.218 Sum_probs=59.9
Q ss_pred hhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCC-----
Q psy67 191 LKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNH----- 265 (526)
Q Consensus 191 IrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d----- 265 (526)
.+.++|||+++|++++|++++.+||++|+ ..++ ..+++.+ .....-..|.........
T Consensus 3 ~F~VkyLG~~eV~~~~g~~vv~~ai~~L~-~~~~--------~~~~~~v--------~l~Vs~~~l~l~d~~t~~~l~~~ 65 (123)
T cd01216 3 VFAVRSLGWVEVAEEDGSEALNKAIDDLS-SCSN--------WEDWKDL--------NMDLAPSTLSLIDPDNLTVLHEC 65 (123)
T ss_pred EEEEEeeeeEEECCCCCHHHHHHHHHHHH-hccc--------cccCeEE--------EEEEecCcEEEEcCCCCeEEEEE
Confidence 36799999999999999999999999884 2222 2223222 222222333333222111
Q ss_pred -CceEEEEEecCCcCeeeEEEEEecCc---------cHHHHHHHHHHHHHHHHHHh
Q psy67 266 -EKGFSYICRDGTTRRWMCHGFLALKE---------SGERLSHAVGCAFAACLERK 311 (526)
Q Consensus 266 -~KvFAFIARd~st~rf~CHVF~C~K~---------kAq~Ia~AIGQAFkVAfErK 311 (526)
-+-.+|.+.+.+. + .| .|.+... ..+.-+..|..|...|++..
T Consensus 66 ~i~~Isf~~~gk~~-r-~F-afI~~~~~~~~~CHVF~c~~~a~~i~~tv~~ac~l~ 118 (123)
T cd01216 66 RVRYLSFWGVGRDV-R-DF-AFIMRTERRRFMCHVFRCEPNAGALATTVEAACKLR 118 (123)
T ss_pred EeeEEEEEEcCCCC-c-EE-EEEEEcCCCeEEEEEEEcCCCHHHHHHHHHHHHHHH
Confidence 1233566665444 3 33 5555422 16778888999998888743
No 47
>KOG0507|consensus
Probab=95.23 E-value=0.0024 Score=72.66 Aligned_cols=180 Identities=12% Similarity=-0.031 Sum_probs=115.9
Q ss_pred cccccccchhcccceeeeeccccchhhHHHHhhhe-eEEEEEEEeeeEEeeccCchhhHHhhhhceEecc---e-Eeccc
Q psy67 130 DVLHLSASAFKYLGCVEVYESRGMQVCEDALKVVL-IYMFALCYLGCVEVYESRGMQVCEDALKVLRYLG---C-VEVYE 204 (526)
Q Consensus 130 ~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~~~l~-~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLG---s-VeV~e 204 (526)
--+||+-+....++.-+ +.++|+||+.....+. ...+.-+|||++.+..+-++--.+.-+...+--- . -.|.+
T Consensus 658 qs~~i~~p~~~~l~~r~--~~p~s~~~~~s~asvp~ep~~~r~~lgst~~~~~~~t~~~~~~~~~~~~~p~~~~v~sv~d 735 (854)
T KOG0507|consen 658 QSKPIPKPRVSNLKSRS--TEPTSDVQHNSHASVPPEPRRIRRQLGSTNLMNSLSTTDSDQKSDTTSEEPSWDRVESVFD 735 (854)
T ss_pred ccccCCCCccccCCCCC--CCCCcccccccccCCCCCCCchhhhcCCccccCCCCCCChhhhCCCCCCCcchhhcccccc
Confidence 45678888888888776 7789999998777774 5667778888877764322111111110000000 0 00000
Q ss_pred CcChHHHHHHHH--HH-HhcC-CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCe
Q psy67 205 SRGMQVCEDALK--VL-RNSR-RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRR 280 (526)
Q Consensus 205 ~rG~qV~eeAVk--rI-Kasg-KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~r 280 (526)
.- -|++.|- .+ ++.. ....++..-+|.-|+.-.+..++.++..++++.|--|..+..+-..|+|++... ..
T Consensus 736 ~~---p~e~~~~~r~y~~~~~~~~r~~g~~a~s~~gv~~~~~d~k~~~~c~~pe~i~e~~~~~~~l~~~a~~~~~~--~l 810 (854)
T KOG0507|consen 736 SF---PCEESVFVREYEPRVAVYLRDRGSKALSVTGVEDEFRDHKSLLVCKQPETIIEWLESDVMLAPVAADSVGA--LL 810 (854)
T ss_pred cc---ccccccchhhcccccccccccccccccccccCCCCCCCcccceeecChhhhcccccchhhhhhhhhhhhhc--ch
Confidence 00 1122110 00 0000 113455666788899999999999999999999999998887778888888764 35
Q ss_pred eeEEEEEecCcc-HHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 281 WMCHGFLALKES-GERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 281 f~CHVF~C~K~k-Aq~Ia~AIGQAFkVAfErKqKRek 316 (526)
.+||+|+.+... +.++..++|+||++|+|-.+.++.
T Consensus 811 ~~~~~~~vd~~g~~~~~i~t~g~af~~a~~~~~~~q~ 847 (854)
T KOG0507|consen 811 QTHGYDRVDQKGIINRSILTEGTAFKIASEIEKLKQD 847 (854)
T ss_pred hhccccccccchhHHHHHHhhhhhhhhHHHHHhhhcc
Confidence 689999997632 888999999999999996555543
No 48
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=95.19 E-value=0.014 Score=50.41 Aligned_cols=32 Identities=47% Similarity=0.667 Sum_probs=29.3
Q ss_pred EEEEEEEeeeEEeeccCchhhHHhhhhceEec
Q psy67 166 YMFALCYLGCVEVYESRGMQVCEDALKVLRYL 197 (526)
Q Consensus 166 ~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYL 197 (526)
+.|.|+|||+++|.++++++++.+||..++..
T Consensus 2 ~~f~v~ylG~~~v~~~~g~~~~~~ai~~l~~~ 33 (123)
T cd00934 2 ISFNVKYLGSVEVPEPRGSQVVRDAIRKLKAA 33 (123)
T ss_pred cEEEEEEEEEEEecCCCCchHHHHHHHHHHHh
Confidence 57999999999999999999999999988654
No 49
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=94.75 E-value=0.015 Score=51.34 Aligned_cols=25 Identities=48% Similarity=0.729 Sum_probs=19.3
Q ss_pred hhcccceeeeecc------ccchhhHHHHhh
Q psy67 138 AFKYLGCVEVYES------RGMQVCEDALKV 162 (526)
Q Consensus 138 ~~~~~g~~ev~es------~g~~~c~~a~~~ 162 (526)
..+|||+++|.++ .|+++|.++++.
T Consensus 2 ~vkYLGs~~V~~~~~~~~~~g~~~v~~ai~~ 32 (140)
T PF00640_consen 2 EVKYLGSVEVSSSRRGDKSRGSDVVREAIQR 32 (140)
T ss_dssp EEEEEEEEEESSSSSTCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEECCccCCCcchhHHHHHHHHHH
Confidence 4579999999888 577777776665
No 50
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain. These domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on a Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via `bridged' water molecules are coordinated by residues an Asn and a Ser residue []. The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6 [].; GO: 0005158 insulin receptor binding; PDB: 1XR0_B 1QQG_B 1IRS_A 2V76_D 1MK7_B 2K00_A 1MIZ_B 1MK9_B 1MIX_A 2H7E_A ....
Probab=90.37 E-value=7 Score=34.21 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=60.0
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC---CcCeeeEEEEEecCccHHHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG---TTRRWMCHGFLALKESGERLSHAVG 301 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~---st~rf~CHVF~C~K~kAq~Ia~AIG 301 (526)
.-...|.|+.+.|.+.+..++..+...|+..|.=|+.+ ...|.|-+.-. .... +.|.+. .|+.|..+|.
T Consensus 21 ~g~~~L~l~~~~l~L~~~~~~~~~~~Wpl~~lRryG~~---~~~F~fEaGRrc~tG~G~---f~f~t~--~a~~I~~~v~ 92 (100)
T PF02174_consen 21 SGPYLLCLTPDELILIDPQSGEPILEWPLRYLRRYGRD---DGIFSFEAGRRCPTGEGL---FWFQTP--DAEEIFETVE 92 (100)
T ss_dssp EEEEEEEEESSEEEEEETTTTEEEEEEEGGGEEEEEEE---TTEEEEEESTTSTTCSEE---EEEEES--THHHHHHHHH
T ss_pred eEEEEEEECCCEEEEecCCCCceEEEEEhHHhhhhccC---CCEEEEEECCcCCCCCcE---EEEEeC--CHHHHHHHHH
Confidence 34688999999999999999999999999999999884 56999988732 1233 578886 4999998887
Q ss_pred HHHHH
Q psy67 302 CAFAA 306 (526)
Q Consensus 302 QAFkV 306 (526)
.+.+.
T Consensus 93 ~~i~~ 97 (100)
T PF02174_consen 93 RAIKA 97 (100)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 51
>KOG3536|consensus
Probab=87.51 E-value=0.12 Score=54.20 Aligned_cols=138 Identities=19% Similarity=0.275 Sum_probs=93.0
Q ss_pred CCccccchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccchhhHHHHhhh-
Q psy67 85 PHQWQSDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQVCEDALKVV- 163 (526)
Q Consensus 85 ~~~w~~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~~~l- 163 (526)
+.-|-.--+.+-.|.-.|.+| |||++||.-..|..+-.++++-+
T Consensus 32 ~~~w~~t~e~l~~g~v~y~~k-----------------------------------flg~~ev~qpkG~~vv~~a~r~~r 76 (321)
T KOG3536|consen 32 PENWTHTRETLIEGHVPYSAK-----------------------------------FLGMTEVEQPKGTDVVREAIRAIR 76 (321)
T ss_pred ccccccchhhhhcccHHHHHH-----------------------------------hcccccccCCCccHHHHHHHHhhh
Confidence 445776666777776666666 99999999999985544665544
Q ss_pred --------------------eeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCC
Q psy67 164 --------------------LIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRR 223 (526)
Q Consensus 164 --------------------~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgK 223 (526)
..+.|+++++|+++|...-....|..|+.+ .....++..|-..-
T Consensus 77 r~~~~kkseg~k~~kvE~~Isi~gviI~~~~T~~v~~~~~l~rIs~cadd---------------k~~kR~fsfIar~~- 140 (321)
T KOG3536|consen 77 RTNPFKKSEGEKLQKVELSISIQGVIIRDLGTMAVKHNFPLYRISYCADD---------------KLAKRAFSFIARMT- 140 (321)
T ss_pred hcccccccccccccceeeeeccceeEEeecccccceecCChhhhhHhHhH---------------HHHHHHHHHHHHhc-
Confidence 378899999999999888776666666532 23455666663211
Q ss_pred CCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCC-CCceEEEEEe
Q psy67 224 RPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRN-HEKGFSYICR 274 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~-d~KvFAFIAR 274 (526)
+.+. +|-+.-+..|+.|+.|..+-..|.+--+.|-..+.. +++++++.-+
T Consensus 141 es~~-hlc~~f~s~Kla~~iTltigqaFdLay~~~~~s~~e~~Kri~glq~r 191 (321)
T KOG3536|consen 141 ESQS-HLCVAFDSLKLADDITLTIGQAFDLAYVKFLDSHEEKQKRIKGLQKR 191 (321)
T ss_pred ccCC-ceEEEeehhhhcchHHHHHHhhcchhhHHHHhhcchHHHHHHHHHhh
Confidence 1111 677777788899999988878887766666554443 4555555444
No 52
>cd01209 SHC SHC phosphotyrosine-binding (PTB) domain. SHC phosphotyrosine-binding (PTB) domain. SHC is a substrate for receptor tyrosine kinases, which can interact with phosphoproteins at NPXY motifs. SHC contains an PTB domain followed by an SH2 domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=86.87 E-value=0.46 Score=45.73 Aligned_cols=24 Identities=42% Similarity=0.791 Sum_probs=22.2
Q ss_pred ccceeeeecc-------ccchhhHHHHhhhe
Q psy67 141 YLGCVEVYES-------RGMQVCEDALKVVL 164 (526)
Q Consensus 141 ~~g~~ev~es-------~g~~~c~~a~~~l~ 164 (526)
|||++||.+| -+|++|.||+.++.
T Consensus 17 YlG~~eV~~Smr~~~~~~Rtqv~rEaI~rV~ 47 (160)
T cd01209 17 YMGCVEVLQSMRALDFETRTQVTRECISLVC 47 (160)
T ss_pred EeeEEeehhhcccCCcchhHHHHHHHHHHHH
Confidence 9999999998 89999999999885
No 53
>KOG4436|consensus
Probab=85.05 E-value=0.25 Score=57.30 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=61.8
Q ss_pred CeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCe---eeEEEEEecCcc-HHHHHHHHHHHHHHH
Q psy67 235 DGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRR---WMCHGFLALKES-GERLSHAVGCAFAAC 307 (526)
Q Consensus 235 dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~r---f~CHVF~C~K~k-Aq~Ia~AIGQAFkVA 307 (526)
..+-.+-+++++++..---.+||+|+....+.+-|+||++....+. +.|+||.|.... -+++.-++-+||.+|
T Consensus 77 ~~~~~iSpD~kel~ak~e~~~is~eSq~~~~~~~~g~~sr~~sg~s~~~~v~~v~~~~n~s~~DE~m~Tl~~a~s~~ 153 (948)
T KOG4436|consen 77 SEAPLISPDTKELLAKKEFKNISGESQSISHVSHFGFISRESSGNSQLEAVCYVFQCQNESLVDEDMWTLWGAFSAA 153 (948)
T ss_pred cccCCCCccHHHHhhhhhhhhccchhhhhhhhhhcCcccccCCCCCcccceeeeeccCCCcchhhhHHHHHHHHhhh
Confidence 3356667788888888888999999999999999999999765554 899999998875 888999999999883
No 54
>cd00824 PTBI IRS-like phosphotyrosine-binding domain. IRS-like phosphotyrosine-binding domain (PTBi); This domain has a PH-like fold and is found in insulin receptor substrate molecules and in other eukaryotic signaling molecules such as FRS2 and Dok. IRS and Dok molecules have an N-terminal PH domain, which is followed by an IRS-like PTB domain. FRS2 just has an N-terminal PTBi domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=84.91 E-value=11 Score=33.80 Aligned_cols=76 Identities=14% Similarity=0.069 Sum_probs=60.5
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC---CcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG---TTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~---st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
-...|.++.+.|.+.|..+...+...|+..|.-|+.|. ..|.|=+.-. .... +.|.|. .++.|.+.|..
T Consensus 21 G~y~L~lt~~~l~L~~~~~~~~~~~wpl~~lRRyG~~~---~~FsfEaGRrc~tG~G~---f~f~t~--~~~~I~~~v~~ 92 (104)
T cd00824 21 GSYRLCLTSKELTLVKLGSRVALVVWPLMFLRRYGYDS---NLFSFEAGRRCVTGEGI---FTFQTD--RAEEIFQNVHE 92 (104)
T ss_pred eeEEEEECCCEEEEEecCCCceEEEeehHHeeecccCC---CEEEEEccCcCCCCCCE---EEEEcC--CHHHHHHHHHH
Confidence 46789999999999999999999999999999999875 6898877631 1233 568885 48889988888
Q ss_pred HHHHHHH
Q psy67 303 AFAACLE 309 (526)
Q Consensus 303 AFkVAfE 309 (526)
++..+-+
T Consensus 93 ~i~~~~~ 99 (104)
T cd00824 93 TILAAMK 99 (104)
T ss_pred HHHHHHH
Confidence 7765543
No 55
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. This domain has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules The DOK family of eukaryotic signaling molecules have an N-terminal PH domain, followed by an IRS-like PTB domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=79.54 E-value=14 Score=33.50 Aligned_cols=72 Identities=14% Similarity=0.124 Sum_probs=57.3
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC---CcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG---TTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~---st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
-...|.|..+.|.+.|..+++++..-|+..+.-.+.| ...|+|-+.-. ... -+.|.|. .|++|...|..
T Consensus 21 G~y~L~v~~~~l~L~d~~~~~~l~~WP~~~LRryG~d---~~~FsFEAGRrC~tGeG---~f~F~t~--~~~~if~~v~~ 92 (104)
T cd01203 21 GSYMLRMGPTELQLKSEDLGATLYMWPYRFLRKYGRD---KGKFSFEAGRRCTSGEG---VFTFDTT--QGNEIFRAVEA 92 (104)
T ss_pred eeEEEEEcCCEEEEEcCCCCcEEEEeehHhhhhhccc---CCEEEEEecCcCCCCCc---EEEEecC--CHHHHHHHHHH
Confidence 4688999999999999999999999999998877765 67999998842 122 3678886 48888877666
Q ss_pred HHH
Q psy67 303 AFA 305 (526)
Q Consensus 303 AFk 305 (526)
+.+
T Consensus 93 ~i~ 95 (104)
T cd01203 93 AIK 95 (104)
T ss_pred HHH
Confidence 554
No 56
>cd01213 tensin Tensin Phosphotyrosine-binding (PTB) domain. Tensin Phosphotyrosine-binding (PTB) domain. Tensin is a a focal adhesion protein, which contains a C-terminal SH2 domain followed by a PTB domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=79.49 E-value=1.1 Score=42.18 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=26.8
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceE
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLR 195 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLK 195 (526)
-+.|.|||++||....|.+++.+||+++.
T Consensus 7 a~nv~yLgS~evesltg~~av~kAv~~~l 35 (138)
T cd01213 7 ACNVLYLGSVDTESLTGNEAIKKAIAQCS 35 (138)
T ss_pred ccceeeeeeEeeccccCcHHHHHHHHHHH
Confidence 46799999999999999999999998876
No 57
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like).
Probab=78.85 E-value=21 Score=31.91 Aligned_cols=72 Identities=11% Similarity=0.025 Sum_probs=56.8
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC---CcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG---TTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~---st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
-...|.++.+.|.+.|.+++..+...|+..|.-|+.| ..+|.|=+.-. .... +.|.|. .|+.|-++|..
T Consensus 20 G~y~L~lt~~~L~L~~~~~~~~~~~wpl~~lRRyG~~---~~~FsfEaGRrc~tG~G~---f~f~t~--~a~~i~~~v~~ 91 (98)
T smart00310 20 GSYRLRLTSETLVLWRLNPRVELVVWPLLSLRRYGRD---KNFFFFEAGRRCVSGPGE---FTFQTV--VAQEIFQLVLE 91 (98)
T ss_pred eeEEEEECCcEEEEEecCCCccEEEeehhHeeeecCC---CCEEEEEccCcCCCCCCE---EEEEcC--cHHHHHHHHHH
Confidence 4688999999999999989989999999999999984 46898877632 1233 457764 48999988877
Q ss_pred HHH
Q psy67 303 AFA 305 (526)
Q Consensus 303 AFk 305 (526)
|.+
T Consensus 92 a~~ 94 (98)
T smart00310 92 AMQ 94 (98)
T ss_pred HHH
Confidence 654
No 58
>cd01214 CG8312 CG8312 Phosphotyrosine-binding (PTB) domain. CG8312 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=76.19 E-value=1.4 Score=41.25 Aligned_cols=29 Identities=31% Similarity=0.477 Sum_probs=26.2
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceE
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLR 195 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLK 195 (526)
+|.|+|||.+-+.+++|...+++|+..+.
T Consensus 3 ty~VkYLG~~~t~~~~Geg~t~~av~~I~ 31 (133)
T cd01214 3 TYTVLYLGNVLTIQARGEGCTEKALGKIW 31 (133)
T ss_pred cEEEEEcccccccccCCCccHHHHHHHHH
Confidence 69999999999999999999999997664
No 59
>KOG4458|consensus
Probab=73.87 E-value=2.3 Score=35.86 Aligned_cols=19 Identities=16% Similarity=0.315 Sum_probs=15.7
Q ss_pred eEEEEEEEeeeEEeeccCc
Q psy67 165 IYMFALCYLGCVEVYESRG 183 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg 183 (526)
+++|-+||.|++++..|.+
T Consensus 33 gi~feakyvgsldiprp~s 51 (78)
T KOG4458|consen 33 GICFEAKYVGSLDIPRPGS 51 (78)
T ss_pred cceEeeeeeeeecCCCCCC
Confidence 7889999999988877755
No 60
>PF14719 PID_2: Phosphotyrosine interaction domain (PTB/PID)
Probab=50.18 E-value=9.7 Score=37.45 Aligned_cols=129 Identities=16% Similarity=0.135 Sum_probs=67.0
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCc
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKG 246 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKe 246 (526)
+|.|+|||.+.....+|...+++++..+.=-..-. . .+. -| +|. -.+.-+.+.--..++.......=.
T Consensus 1 ty~V~YLG~~~t~~~~Gegct~kpV~~lw~~~~~~-k--~~~-----~m-~L~---V~~~Gik~~~~~~~~~~y~i~RIt 68 (182)
T PF14719_consen 1 TYKVRYLGNVLTRGAKGEGCTEKPVSKLWRRYKQG-K--PDK-----KM-KLT---VSPSGIKMETKDKGLTEYWIHRIT 68 (182)
T ss_pred CeEEEEecceecccccccchHHHHHHHHHHHhccC-C--CCc-----ee-EEE---EcCCceEEEECCCCceEEEeeeEE
Confidence 48999999999999999888999997663110000 0 000 00 010 001122233233444444322100
Q ss_pred ee-eeeecceeEEE-eeCCCC-----CceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy67 247 LM-VDQTIEKVSFC-APDRNH-----EKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRDKE 317 (526)
Q Consensus 247 lL-~s~pI~rISFC-A~D~~d-----~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKReke 317 (526)
-. .+....+|--| ..+... -++.||+|...... +.-|..+.++..+||+.--++|..+++.
T Consensus 69 YC~ad~~~PrVFawIyrhe~~~~~~~L~CHAvlC~k~~~A----------kama~~L~~af~~Af~~~kr~k~~~~~~ 136 (182)
T PF14719_consen 69 YCTADPQHPRVFAWIYRHEGKKLKVELRCHAVLCSKEEKA----------KAMARALYQAFRSAFQEFKRDKRSRQNA 136 (182)
T ss_pred EecCCCCCCceEEEEEEcccCCCcccEEEEEEEECCHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00 01111333222 222211 26889999975432 2248899999999998766655555443
No 61
>KOG4458|consensus
Probab=41.71 E-value=13 Score=31.62 Aligned_cols=28 Identities=14% Similarity=0.262 Sum_probs=25.1
Q ss_pred hceEecceEecccCcChHHHHHHHHHHH
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLR 219 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIK 219 (526)
+.++|.|++++..+...-.+.+||++|+
T Consensus 36 feakyvgsldiprp~srieivaamrrir 63 (78)
T KOG4458|consen 36 FEAKYVGSLDIPRPGSRIEIVAAMRRIR 63 (78)
T ss_pred EeeeeeeeecCCCCCCeeehhHhhhhhe
Confidence 4789999999999988888999999985
No 62
>KOG3775|consensus
Probab=40.25 E-value=19 Score=39.36 Aligned_cols=124 Identities=19% Similarity=0.191 Sum_probs=67.5
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhce--EecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEE----
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVL--RYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLR---- 238 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqL--KYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIr---- 238 (526)
.-.|.|.|||++||..-||..|+-.||+++ .|--++... +--.-+.+-.++- |.+.+..++-.
T Consensus 336 ~erf~l~~LgSVEv~~HKGngVlcqAm~KI~t~ykns~~~~-~p~s~~lEislRg----------V~~s~k~~~~~~k~~ 404 (482)
T KOG3775|consen 336 VERFDLQFLGSVEVPCHKGNGVLCQAMQKIATAYKNSVHLR-PPASCVLEISLRG----------VKLSLKGGGPEFKFQ 404 (482)
T ss_pred hhheeeeeeeeeEeecccCccHHHHHHHHHHHHhcCCcccc-Ccchhhhhhhcce----------eEeecCCCCcccccc
Confidence 347999999999999999999999999876 222222211 1111111122221 22222222211
Q ss_pred ----EEECCCCceeeeeecceeEE--EeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHH
Q psy67 239 ----VVDDETKGLMVDQTIEKVSF--CAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLE 309 (526)
Q Consensus 239 ----VVD~kTKelL~s~pI~rISF--CA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfE 309 (526)
..-.+....+..||..++-| .+.++...+.|..|.+.... .++-|+.+-.+.-+-.+.-++
T Consensus 405 ~c~~f~~lknisfc~~hpr~n~~~gfitkhp~~~rfachVfks~es----------~rpvA~sVgRaF~~~yq~fl~ 471 (482)
T KOG3775|consen 405 RCSHFFQLKNISFCGCHPRNNCYFGFITKHPLLSRFACHVFKSQES----------TRPVAESVGRAFQEFYQEFLE 471 (482)
T ss_pred ccceeeEecccceeccccccceEEEeeccchhhhheeeeeeecccC----------ChHHHHHHHHHHHHHHHHHHH
Confidence 11223445566777766544 45555555666666665321 144577777777665554443
No 63
>PF08416 PTB: Phosphotyrosine-binding domain; InterPro: IPR013625 The phosphotyrosine-binding domain (PTB, also phosphotyrosine-interaction or PI domain) of tensin tends to be found at the C terminus of a protein. Tensin is a multi-domain protein that binds to actin filaments and functions as a focal-adhesion molecule (focal adhesions are regions of plasma membrane through which cells attach to the extracellular matrix). Human tensin has actin-binding sites, an SH2 (IPR000980 from INTERPRO) domain and a region similar to the tumour suppressor PTEN []. The PTB domain interacts with the cytoplasmic tails of beta integrin by binding to an NPXY motif []. ; GO: 0005515 protein binding; PDB: 3HQC_A 2DKQ_A 2LOZ_A 2CY5_A 2CY4_A 2GJY_A 1WVH_A.
Probab=37.38 E-value=22 Score=32.79 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=27.4
Q ss_pred EEEEEeeeEEeeccCchhhHHhhhhceEec
Q psy67 168 FALCYLGCVEVYESRGMQVCEDALKVLRYL 197 (526)
Q Consensus 168 FaVkYLGsvEV~e~rg~qVV~eAIrqLKYL 197 (526)
|.|-||+++.+....|.++|++||..|+.|
T Consensus 2 ~~V~hL~T~~~e~~~g~~~v~d~i~~l~~l 31 (131)
T PF08416_consen 2 YNVEHLATFDVESLTGPQAVEDAIRRLKLL 31 (131)
T ss_dssp EEEEEEEEEEECTTSCCCHHHHHHHHHHHH
T ss_pred cEEEEEEEEEcCCCcchhhHHHHHHHHHhh
Confidence 689999999999999999999999988755
No 64
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=34.07 E-value=3e+02 Score=26.64 Aligned_cols=77 Identities=13% Similarity=0.080 Sum_probs=54.4
Q ss_pred CCCCcEEEEEEECCeEEEEE------CCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHH
Q psy67 222 RRRPVRAILYVSGDGLRVVD------DETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGER 295 (526)
Q Consensus 222 gKK~qKV~L~VS~dGIrVVD------~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~ 295 (526)
+.+.++-.|.|+...|-++| .....+-...||..|+-.+..+..+.+|..-..+.. -.+|.|... -+
T Consensus 62 ~~K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I~~IsvS~~~D~~~vihv~~~~-----D~il~~~~k--~E 134 (199)
T PF06017_consen 62 RNKPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDITGISVSPLSDNFFVIHVPGEG-----DLILESDFK--TE 134 (199)
T ss_pred CCCccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccccEEEEccCCCCEEEEEECCCC-----CEEEEeCcH--HH
Confidence 34678889999999999995 445556677899999999888877788877764332 255777542 34
Q ss_pred HHHHHHHHHH
Q psy67 296 LSHAVGCAFA 305 (526)
Q Consensus 296 Ia~AIGQAFk 305 (526)
++..|.+++.
T Consensus 135 lv~~L~~~~~ 144 (199)
T PF06017_consen 135 LVTILCKAYK 144 (199)
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 65
>cd01273 CED-6 CED-6 Phosphotyrosine-binding (PTB) domain. CED-6 Phosphotyrosine-binding (PTB) domain. CED6 is an adaptor protein involved in the engulfment of apoptotic cells. It has a C-terminal PTB domain, which can bind to NPXY motifs. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=32.98 E-value=60 Score=30.13 Aligned_cols=37 Identities=30% Similarity=0.595 Sum_probs=34.5
Q ss_pred hhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccchhhHHHHhhhe
Q psy67 93 ASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQVCEDALKVVL 164 (526)
Q Consensus 93 ~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~~~l~ 164 (526)
+.+..|.|.|.|| |||++||.++.|+.+|.+|++.|+
T Consensus 2 ~~l~~g~v~f~vk-----------------------------------yLG~~eV~~~~g~~v~~eAi~ki~ 38 (142)
T cd01273 2 EYLINGHVEYVAK-----------------------------------FLGCVEVDQPKGSEVVREAIRKLR 38 (142)
T ss_pred hhHccCceEEEEE-----------------------------------EeeeEEecCCCCchHHHHHHHHHH
Confidence 3578999999999 999999999999999999999975
No 66
>cd01211 GAPCenA GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA Phosphotyrosine-binding (PTB) domain. GAPCenA is a centrosome-associated GTPase activating protein (GAP) for rab 6. It consists of an N-terminal PTB domain and a C-terminal TBC domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=29.00 E-value=34 Score=32.13 Aligned_cols=26 Identities=27% Similarity=0.548 Sum_probs=20.5
Q ss_pred EEEEeeeEEeeccCchhhHHhhhhce
Q psy67 169 ALCYLGCVEVYESRGMQVCEDALKVL 194 (526)
Q Consensus 169 aVkYLGsvEV~e~rg~qVV~eAIrqL 194 (526)
.|+||||+.|..|++-.....+|..+
T Consensus 5 ~vtYLGct~V~aP~sE~e~~r~m~~l 30 (125)
T cd01211 5 NVTYLGCSQLVNPDSENEMKRLMKVL 30 (125)
T ss_pred CcEEeeeEEecCCCCHHHHHHHHHHH
Confidence 48999999999999876666666433
No 67
>KOG4815|consensus
Probab=26.69 E-value=92 Score=33.72 Aligned_cols=24 Identities=33% Similarity=0.577 Sum_probs=18.9
Q ss_pred EEecCc-cHHHHHHHHHHHHHHHHH
Q psy67 286 FLALKE-SGERLSHAVGCAFAACLE 309 (526)
Q Consensus 286 F~C~K~-kAq~Ia~AIGQAFkVAfE 309 (526)
|...++ .|.+|+.+|||||++|.+
T Consensus 3 ~dqk~esqamrivrtigqafevchk 27 (511)
T KOG4815|consen 3 FDQKKESQAMRIVRTIGQAFEVCHK 27 (511)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 399999999999999987
No 68
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=25.82 E-value=1.8e+02 Score=25.40 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=29.6
Q ss_pred cChHHHHHHHHHHH-hcCCCCcEEEEEEECC----eEEEEECCCCceeeeeecc
Q psy67 206 RGMQVCEDALKVLR-NSRRRPVRAILYVSGD----GLRVVDDETKGLMVDQTIE 254 (526)
Q Consensus 206 rG~qV~eeAVkrIK-asgKK~qKV~L~VS~d----GIrVVD~kTKelL~s~pI~ 254 (526)
...+...+|+.+|. ........+.+.|..+ -|+|+|.+|+++|...|-.
T Consensus 34 ~~~e~l~~~v~~ln~~~~~~~~~l~F~vde~~~~~vVkViD~~T~eVIRqIP~E 87 (107)
T PF03646_consen 34 PSKEELEEAVEKLNEFLQALNTSLRFSVDEESGRVVVKVIDKETGEVIRQIPPE 87 (107)
T ss_dssp --HHHHHHHHHHHHHHHTTSS--EEEEEEEETTEEEEEEEETTT-SEEEEE-HH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCCcH
Confidence 34556777777773 2233456677777544 3899999999999888743
No 69
>KOG3697|consensus
Probab=22.44 E-value=44 Score=35.59 Aligned_cols=32 Identities=38% Similarity=0.539 Sum_probs=24.7
Q ss_pred cccchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccch
Q psy67 88 WQSDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQ 154 (526)
Q Consensus 88 w~~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~ 154 (526)
|..-.+.|+.-.-+|.|+ |||||||.+|--+.
T Consensus 5 ~~~~~d~v~~~GVs~~v~-----------------------------------YlGcVeV~~Sm~~l 36 (345)
T KOG3697|consen 5 EPHPADEVRGPGVSYSVT-----------------------------------YLGCVEVLESMNVL 36 (345)
T ss_pred ccCHHHhhccCCceEEEE-----------------------------------EeeeehHHhhhhhh
Confidence 445556677777888898 99999999986543
No 70
>cd01208 X11 X11 Phosphotyrosine-binding (PTB) domain. X11 Phosphotyrosine-binding (PTB) domain. The neuronal protein X11 has a PTB domain followed by two PDZ domains. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether. X11 binds to the cytoplasmic domain of the beta-amyloid precursor protein (beta-APP) and does not require the substrate to be tyrosine-phosphorylated for binding.
Probab=22.43 E-value=2.1e+02 Score=27.86 Aligned_cols=27 Identities=19% Similarity=0.335 Sum_probs=21.1
Q ss_pred hhcccceeeeecc------ccchhhHHHHhhhe
Q psy67 138 AFKYLGCVEVYES------RGMQVCEDALKVVL 164 (526)
Q Consensus 138 ~~~~~g~~ev~es------~g~~~c~~a~~~l~ 164 (526)
...|||+.+|.-+ --|++..||+.+++
T Consensus 8 ~a~YlG~t~~~~~~~~~~~tR~~~a~Eai~rik 40 (156)
T cd01208 8 RARYLGSTQLLCEKTPSKNVRMXQAQEAVSRIK 40 (156)
T ss_pred EEEeeceeeeeecCCCChhhhHHHHHHHHHHHh
Confidence 3459999996543 34889999999998
No 71
>PF07933 DUF1681: Protein of unknown function (DUF1681); InterPro: IPR012466 NECAP 1 localises to clathrin-coated pits and direct binding to the globular ear domain of the alpha-adaptin subunit (alpha-ear) of the adaptor protein 2 (AP-2) complex. This interaction is mediated by a specific motif, WVQF, that uses a distinct alpha-ear interface relative to known alpha-ear-binding partners. Disruption of this interaction blocks clathrin-mediated endocytosis [].; GO: 0006897 endocytosis, 0016020 membrane; PDB: 1TQZ_A.
Probab=20.15 E-value=4.4e+02 Score=25.74 Aligned_cols=72 Identities=22% Similarity=0.317 Sum_probs=38.9
Q ss_pred EEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 237 LRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 237 IrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKRek 316 (526)
|++.|..|+++...+|+..-..+-.--+.-++|+.=..|+ +.+ |+|.---- .++ .=+.-|.+|++...|+.+
T Consensus 55 i~leD~~tgeLFA~~P~~~~~~VE~v~DSSRYFvlRv~d~-~Gr---~AfiGiGF-~eR---sdAFDF~vaLqd~~k~~~ 126 (160)
T PF07933_consen 55 IRLEDPSTGELFAQCPYDDYAAVEPVIDSSRYFVLRVQDP-SGR---HAFIGIGF-RER---SDAFDFNVALQDHRKYLK 126 (160)
T ss_dssp EEEE-SS--SS-EEEEE-SS--EEE-TT--S-EEEEEEET-TTE---EEEEEEE--S-H---HHHHHHHHHHHHHHS-SS
T ss_pred EEecCCCCcceEEECcccCCCceEEeecccceEEEEEEcC-CCc---EEEEEEee-ccc---cccccHHHHHHHHHHHhh
Confidence 4678999999999999988655555555678999888887 444 77776422 111 011337888886665543
Done!