Query psy67
Match_columns 526
No_of_seqs 245 out of 592
Neff 4.0
Searched_HMMs 29240
Date Sat Aug 17 00:46:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy67.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/67hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f0w_A NUMB-R, NUMB-like prote 100.0 1.2E-35 4.2E-40 274.5 17.7 120 197-316 49-168 (168)
2 2ej8_A DCC-interacting protein 100.0 5.4E-31 1.9E-35 242.0 16.1 138 159-316 9-151 (160)
3 3so6_A LDL receptor adaptor pr 100.0 3.8E-30 1.3E-34 227.2 16.8 121 193-313 7-132 (137)
4 2ela_A Adapter protein contain 100.0 2.5E-30 8.6E-35 241.8 15.9 138 159-316 22-164 (175)
5 1ntv_A Disabled homolog 1; bet 100.0 3.3E-29 1.1E-33 228.4 17.8 135 156-317 6-149 (152)
6 1p3r_A Disabled homolog 2; PTB 100.0 1.1E-28 3.6E-33 227.1 17.7 126 165-317 16-148 (160)
7 4dbb_A Amyloid beta A4 precurs 100.0 1.7E-28 5.6E-33 226.4 14.9 134 159-315 2-140 (162)
8 3dxe_A Amyloid beta A4 protein 100.0 6.9E-28 2.4E-32 219.5 16.3 116 192-310 10-127 (140)
9 1aqc_A X11; PTB domain; 2.30A 99.9 2.2E-27 7.6E-32 221.0 16.5 133 163-313 5-166 (172)
10 1wgu_A APBB2, amyloid beta (A4 99.9 3.4E-27 1.2E-31 213.8 12.7 116 191-309 17-135 (136)
11 2ysz_A Amyloid beta A4 precurs 99.9 5.5E-27 1.9E-31 222.3 12.4 115 192-309 18-135 (185)
12 1n3h_A SHC transforming protei 99.9 8.7E-28 3E-32 230.2 6.8 85 225-310 119-204 (207)
13 2dyq_A Amyloid beta A4 precurs 99.9 1.7E-24 5.9E-29 198.2 15.9 116 192-310 18-140 (144)
14 3d8d_A Amyloid beta A4 precurs 99.9 4.2E-24 1.4E-28 196.4 15.0 127 165-305 2-135 (148)
15 2yt0_A Amyloid beta A4 protein 99.9 2.3E-23 7.9E-28 196.2 16.4 104 197-303 69-175 (176)
16 3suz_A Amyloid beta A4 precurs 99.9 1.2E-22 4.1E-27 208.6 16.4 130 161-313 4-168 (388)
17 1wvh_A Tensin, tensin1; beta s 99.8 2.9E-19 9.8E-24 162.1 14.6 113 190-302 2-131 (134)
18 3hqc_A Tensin-like C1 domain-c 99.8 4.7E-18 1.6E-22 157.7 14.2 116 188-303 12-143 (157)
19 4dx8_A Integrin beta-1-binding 99.1 3.5E-09 1.2E-13 97.9 17.3 85 226-310 62-151 (154)
20 2cy5_A Epidermal growth factor 99.0 4E-09 1.4E-13 96.4 13.9 117 167-307 10-133 (140)
21 2ej8_A DCC-interacting protein 97.4 0.00025 8.5E-09 64.9 7.0 114 188-316 14-147 (160)
22 2ela_A Adapter protein contain 97.3 0.00027 9.2E-09 66.0 6.2 114 188-316 27-160 (175)
23 3d8d_A Amyloid beta A4 precurs 96.6 0.0016 5.5E-08 60.2 4.3 24 141-164 9-37 (148)
24 1ntv_A Disabled homolog 1; bet 96.6 0.0012 4.2E-08 59.9 3.4 30 136-165 19-48 (152)
25 3dxe_A Amyloid beta A4 protein 96.4 0.0013 4.4E-08 59.9 2.7 119 164-312 6-133 (140)
26 3so6_A LDL receptor adaptor pr 96.1 0.0026 8.9E-08 55.6 3.0 33 165-197 3-35 (137)
27 2dyq_A Amyloid beta A4 precurs 96.0 0.0024 8E-08 58.7 2.3 32 165-196 15-46 (144)
28 1p3r_A Disabled homolog 2; PTB 96.0 0.003 1E-07 57.8 3.0 30 136-165 18-47 (160)
29 1wgu_A APBB2, amyloid beta (A4 95.8 0.0036 1.2E-07 56.7 2.5 33 164-196 14-46 (136)
30 2ysz_A Amyloid beta A4 precurs 95.6 0.0055 1.9E-07 58.3 3.1 118 164-310 14-140 (185)
31 3f0w_A NUMB-R, NUMB-like prote 94.3 0.013 4.5E-07 53.8 1.5 50 81-165 23-72 (168)
32 4dbb_A Amyloid beta A4 precurs 94.0 0.061 2.1E-06 49.3 5.5 24 141-164 15-44 (162)
33 4f7g_A Talin-1; alpha-helix bu 91.9 0.52 1.8E-05 44.2 8.6 74 225-306 142-215 (222)
34 1wvh_A Tensin, tensin1; beta s 91.5 0.097 3.3E-06 47.5 2.9 30 167-196 3-32 (134)
35 4dxa_B KREV interaction trappe 91.1 1 3.6E-05 44.6 10.1 69 226-302 242-310 (322)
36 1mix_A Talin; focal adhesion, 90.1 1.2 4.2E-05 40.6 9.0 69 225-301 131-199 (206)
37 1aqc_A X11; PTB domain; 2.30A 87.0 0.71 2.4E-05 42.7 5.1 24 141-164 14-43 (172)
38 3hqc_A Tensin-like C1 domain-c 83.1 0.52 1.8E-05 43.9 2.3 30 165-194 13-42 (157)
39 3ivf_A Talin-1; FERM domain, c 82.6 4.3 0.00015 40.8 9.0 69 226-302 297-365 (371)
40 3au4_A Myosin-X; protein-prote 81.0 6.7 0.00023 41.7 10.2 81 225-315 465-545 (555)
41 3pvl_A Myosin VIIA isoform 1; 75.5 11 0.00039 41.4 10.2 71 226-304 493-566 (655)
42 3suz_A Amyloid beta A4 precurs 74.0 2.3 8E-05 43.5 4.1 24 141-165 15-45 (388)
43 1j0w_A Downstream of tyrosine 73.2 45 0.0015 28.8 11.7 75 226-305 21-96 (103)
44 2v76_A Docking protein 1; alte 71.7 40 0.0014 29.3 10.7 74 227-305 24-101 (107)
45 1p5t_A DOK1, docking protein 1 71.6 39 0.0013 30.3 10.9 73 227-304 26-102 (127)
46 2dlw_A Docking protein 2, isof 61.9 21 0.00072 31.4 7.1 73 227-304 29-102 (113)
47 1ef1_A Moesin; membrane, FERM 60.3 81 0.0028 30.2 11.6 69 224-298 209-279 (294)
48 3voq_A Target of rapamycin com 58.0 59 0.002 29.3 9.3 77 226-304 30-118 (125)
49 1h4r_A Merlin; FERM, neurofibr 54.9 80 0.0027 30.6 10.7 69 224-298 229-299 (314)
50 2i1j_A Moesin; FERM, coiled-co 48.2 1.1E+02 0.0037 33.2 11.3 68 224-297 212-281 (575)
51 3ulb_A Target of rapamycin com 48.0 1.5E+02 0.0052 26.5 10.8 79 227-305 29-114 (121)
52 1qqg_A IRS-1, insulin receptor 43.6 1.2E+02 0.0042 29.3 10.0 77 226-309 178-255 (264)
53 3ml4_A Protein DOK-7; tyrosine 38.7 2.2E+02 0.0075 27.8 10.7 70 225-299 130-199 (224)
54 2kuq_A Fibroblast growth facto 29.3 3.5E+02 0.012 25.1 10.1 69 226-301 34-102 (153)
55 3qij_A Protein 4.1; cytoskelet 27.3 2E+02 0.0068 28.0 8.5 63 224-291 215-278 (296)
56 2hc5_A ORF 99, hypothetical pr 20.3 1.8E+02 0.006 25.5 5.9 48 207-254 36-88 (117)
No 1
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=100.00 E-value=1.2e-35 Score=274.50 Aligned_cols=120 Identities=78% Similarity=1.275 Sum_probs=109.7
Q ss_pred cceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC
Q psy67 197 LGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG 276 (526)
Q Consensus 197 LGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~ 276 (526)
||+++|..++|++++++||++|++.++++++|.|.||.+||+|+|.++++++++|+|++||||+.|+.+.++||||++++
T Consensus 49 LGs~~V~~~~g~~~~~~Ai~~lk~~~~k~~~V~L~VS~~GI~l~d~~t~~~l~~~~i~~ISf~~~d~~~~~~FafIar~~ 128 (168)
T 3f0w_A 49 LGHVEVEESRGMHVCEDAVKKLKAMGRKSVKSVLWVSADGLRVVDDKTKDLLVDQTIEKVSFCAPDRNLDKAFSYICRDG 128 (168)
T ss_dssp EEEEEESCSCCHHHHHHHHHHHHTTC--CEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECSSCTTEEEEEEEET
T ss_pred eeEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEEEECCEEEEEeCCCCeEEEeeecCcEEEEecCCCCCcEEEEEEecC
Confidence 66666777889999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred CcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 277 TTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 277 st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKRek 316 (526)
.+.++.||||.|.+++|+.|+.+||+||++||++||||+|
T Consensus 129 ~~~~~~CHvF~c~~~~A~~I~~aIgqAF~~a~~~kqk~~~ 168 (168)
T 3f0w_A 129 TTRRWICHCFLALKDSGERLSHAVGCAFAACLERKQRREK 168 (168)
T ss_dssp TTTEEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcEEEEEEEeccchHHHHHHHHHHHHHHHHHHhhhccC
Confidence 8899999999998767999999999999999999999986
No 2
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=99.97 E-value=5.4e-31 Score=242.03 Aligned_cols=138 Identities=20% Similarity=0.311 Sum_probs=110.4
Q ss_pred HHhhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEE
Q psy67 159 ALKVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLR 238 (526)
Q Consensus 159 a~~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIr 238 (526)
..+.++.+.|.|+||||+||.+++|++++.+||.+|++- +.++ ...++++|+|.||.+||+
T Consensus 9 ~~~~~~~~~f~vkYLGs~eV~~~~g~~~~~~Ai~~l~~~------------------~~~~-~~~~~~~v~L~VS~~gi~ 69 (160)
T 2ej8_A 9 TEDSILHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAA------------------RAIH-NIFRMTESHLLVTCDCLK 69 (160)
T ss_dssp CTTCSCEEEEEEEEEEEEEECCCSCTHHHHHHHHHHHHH------------------HHHT-TCCCCCEEEEEEESSEEE
T ss_pred CcccccccEEEEEeeeEEEeCCCCCHHHHHHHHHHHHHh------------------hccc-ccCcCCEEEEEEECCeEE
Confidence 456667899999999999988776665555555444320 1111 123679999999999999
Q ss_pred EEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC-----CcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 239 VVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG-----TTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 239 VVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~-----st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|+|++|+.++++|+|++||||+.|++|.++||||++++ ..++|.||||.|++ .|++|+.+||+||++||+++.+
T Consensus 70 l~d~~tk~~~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~-~A~~I~~tigqAF~~ay~~~l~ 148 (160)
T 2ej8_A 70 LIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNN-EGEKICDSVGLAKQIALHAELD 148 (160)
T ss_dssp EECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEECC------CEEEEEEEEESS-CHHHHHHHHHHHHHHHHHHC--
T ss_pred EEeCCCCeEEEEeeCCeEEEEEecCCCCeEEEEEEecCCcccCCCccEEEEEEEcch-hHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 26789999999987 5999999999999999997766
Q ss_pred hhh
Q psy67 314 RDK 316 (526)
Q Consensus 314 Rek 316 (526)
++.
T Consensus 149 ~~~ 151 (160)
T 2ej8_A 149 RRA 151 (160)
T ss_dssp ---
T ss_pred HhH
Confidence 553
No 3
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=99.97 E-value=3.8e-30 Score=227.16 Aligned_cols=121 Identities=29% Similarity=0.480 Sum_probs=103.2
Q ss_pred ceEecceEecccCcChHHHHHHHHHHHh----cCCCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCce
Q psy67 193 VLRYLGCVEVYESRGMQVCEDALKVLRN----SRRRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 193 qLKYLGsVeV~e~rG~qV~eeAVkrIKa----sgKK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~Kv 268 (526)
.++|||+++|..++|++++++||++|+. .++++++|.|.||.+||+|+|.++++++++|+|++||||+.|+.+.++
T Consensus 7 ~v~YLGs~~v~~~~g~~~~~~Av~~l~~~~k~~~~~~~~v~L~Vs~~gi~l~d~~~~~~~~~~~i~~Isf~~~d~~~~~~ 86 (137)
T 3so6_A 7 SLKYLGMTLVERPKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMHDKV 86 (137)
T ss_dssp EEEEEEEEEESSSCCHHHHHHHHHHHHHHHHHTCSCCEEEEEEEETTEEEEEETTTCCEEEEEEGGGEEEEEECSSSTTE
T ss_pred EEEEeeEEEecCCCChhHHHHHHHHHHHHhhccCCCCCEEEEEEeCCeEEEEECCCCcEEEeeccCEEEEEEecCCCCCE
Confidence 3444444444555677777777777743 456889999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcCeeeEEEEEecCc-cHHHHHHHHHHHHHHHHHHhhh
Q psy67 269 FSYICRDGTTRRWMCHGFLALKE-SGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 269 FAFIARd~st~rf~CHVF~C~K~-kAq~Ia~AIGQAFkVAfErKqK 313 (526)
||||++++.+..+.||||.|+++ .|++|+.+|++||++||+.+++
T Consensus 87 FafI~r~~~~~~~~CHvF~c~~~~~A~~i~~~l~~AF~~a~~~~q~ 132 (137)
T 3so6_A 87 FAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAFKVAFEFWQV 132 (137)
T ss_dssp EEEEEECSSSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCeEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888999999999875 4999999999999999997653
No 4
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.5e-30 Score=241.80 Aligned_cols=138 Identities=20% Similarity=0.311 Sum_probs=111.0
Q ss_pred HHhhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEE
Q psy67 159 ALKVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLR 238 (526)
Q Consensus 159 a~~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIr 238 (526)
..+.++.+.|.|+||||+||.+++|++++.+||++|++- +.++ ...++++|.|.||.+||+
T Consensus 22 ~~~~~~~~~f~vkYLGs~eV~~~~g~~v~~eAi~~l~~~------------------~~~~-~~~~~~~V~L~VS~~gI~ 82 (175)
T 2ela_A 22 TEDSILHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAA------------------RAIH-NIFRMTESHLLVTCDCLK 82 (175)
T ss_dssp ---CCCCEEEEEEEEEEEEECSCCSTHHHHHHHHHHHHH------------------HHHT-TCCCCEEEEEEECSSEEE
T ss_pred CccccccceEEEEcceEEEecCCCCHHHHHHHHHHHHHh------------------hccc-ccccCCEEEEEEECCeEE
Confidence 345557899999999999998776666655555544420 1111 123689999999999999
Q ss_pred EEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecC-----CcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 239 VVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDG-----TTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 239 VVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~-----st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|+|++|+.++++|+|++||||+.|++|.++||||++++ ..++|.||||.|++ .|++|+.+|||||++||+++.+
T Consensus 83 l~d~~tk~~i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~-~A~~I~~tIgqAF~~ay~~~l~ 161 (175)
T 2ela_A 83 LIDPQTQVTRLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNN-EGEKICDSVGLAKQIALHAELD 161 (175)
T ss_dssp EECTTTCCEEEEEEGGGEEEEEEETTEEEEEEEEEEEC-------CEEEEEEEEESS-CHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCcEEEEeecCEEEEEEeCCCCCcEEEEEEecCccccCCCcceEEEEEEcch-hHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 26789999999987 5999999999999999997776
Q ss_pred hhh
Q psy67 314 RDK 316 (526)
Q Consensus 314 Rek 316 (526)
++.
T Consensus 162 ~~~ 164 (175)
T 2ela_A 162 RRA 164 (175)
T ss_dssp C--
T ss_pred hhH
Confidence 554
No 5
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=99.96 E-value=3.3e-29 Score=228.44 Aligned_cols=135 Identities=20% Similarity=0.337 Sum_probs=111.9
Q ss_pred hHHHHhhhe--eEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHH-------hcCCCCc
Q psy67 156 CEDALKVVL--IYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLR-------NSRRRPV 226 (526)
Q Consensus 156 c~~a~~~l~--~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIK-------asgKK~q 226 (526)
.+.+++... ++.|.|+||||+||.+++ |++++.+||++|+ ..+++++
T Consensus 6 ~~~L~~~~~g~gv~f~vkYLGs~eV~~~~------------------------g~~v~~eA~~~i~~~~~~~k~~~~~~~ 61 (152)
T 1ntv_A 6 EATLIKRFKGEGVRYKAKLIGIDEVSAAR------------------------GDKLCQDSMMKLKGVVAGARSKGEHKQ 61 (152)
T ss_dssp HHHHHHHHSTTCEEEEEEEEEEEECSSSC------------------------CHHHHHHHHHHHHHHHHHHHTTTCCCE
T ss_pred HHHHHHhhcCCCcEEEEEeCCeEEecCCC------------------------CchHHHHHHHHHHHHHhhhhccCCCCC
Confidence 344444443 678888888888876554 5555556666554 3467899
Q ss_pred EEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHH
Q psy67 227 RAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAA 306 (526)
Q Consensus 227 KV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkV 306 (526)
+|+|.||.+||+|+|.+|++++++|+|++||||+.|+.|.++|+||++++. .+.||+|.+.+ .|++|+.+|||||++
T Consensus 62 ~v~L~IS~~GI~v~d~~tk~~~~~~~l~~ISf~a~d~~d~r~FafI~k~~~--~h~f~v~~s~~-~A~~I~~tigqAF~~ 138 (152)
T 1ntv_A 62 KIFLTISFGGIKIFDEKTGALQHHHAVHEISYIAKDITDHRAFGYVCGKEG--NHRFVAIKTAQ-AAEPVILDLRDLFQL 138 (152)
T ss_dssp EEEEEEETTEEEEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESSTT--CCEEEEEEESS-CSHHHHHHHHHHHHH
T ss_pred EEEEEEECCeEEEEECCCCceEeeeecCcEEEEeCCCCCCcEEEEEEEcCC--eEEEEEEccHH-HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999974 46788888754 599999999999999
Q ss_pred HHHHhhhhhhh
Q psy67 307 CLERKQKRDKE 317 (526)
Q Consensus 307 AfErKqKReke 317 (526)
||+.++++++|
T Consensus 139 ay~~~~~~~~~ 149 (152)
T 1ntv_A 139 IYELKQREELE 149 (152)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHhHHHHh
Confidence 99999998887
No 6
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=99.96 E-value=1.1e-28 Score=227.06 Aligned_cols=126 Identities=19% Similarity=0.348 Sum_probs=107.2
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHh-------cCCCCcEEEEEEECCeE
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRN-------SRRRPVRAILYVSGDGL 237 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKa-------sgKK~qKV~L~VS~dGI 237 (526)
++.|.|+||||++|.++ +|++++.+||++|+. .++++++|+|.||.+||
T Consensus 16 gv~f~vkYLGs~~V~~~------------------------~g~~~~~eA~~~i~~~~~~~k~~~~~~~~V~L~IS~~GI 71 (160)
T 1p3r_A 16 GVKYKAKLIGIDDVPDA------------------------RGDKMSQDSMMKLKGMAAAGRSQGQHKQRIWVNISLSGI 71 (160)
T ss_dssp CEEEEEEEEEEEEESSS------------------------CCHHHHHHHHHHHHHHHHHHHTTTCCCEEEEEEEETTEE
T ss_pred CeEEEEEeceeEEecCC------------------------CChHHHHHHHHHHHHHHhhhhccCCCCCEEEEEEECCeE
Confidence 47777777777777554 555666666666653 36788999999999999
Q ss_pred EEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy67 238 RVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQKRDKE 317 (526)
Q Consensus 238 rVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqKReke 317 (526)
+|+|.+|+.++++|+|++||||+.|+.|.++||||++++ ..+.||+|.+.+ .|++|+.+|||||++||+.+++.+.+
T Consensus 72 ~v~d~~tk~~~~~~~l~~ISfca~d~~d~r~FafI~k~~--~~h~c~vf~s~~-~A~~I~~tigqAF~~ay~~~~~~~~~ 148 (160)
T 1p3r_A 72 KIIDEKTGVIEHEHPVNKISFIARDVTDNRAFGYVCGGE--GQHQFFAIKTGQ-QAEPLVVDLKDLFQVIYNVKKKEEDK 148 (160)
T ss_dssp EEEETTTCCEEEEECGGGEEEEEECTTCTTEEEEEESST--TCEEEEEEEESS-CSHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEEECCCCeEEEecccCeEEEEecCCCCCcEEEEEEecC--CEEEEEEEccHH-HHHHHHHHHHHHHHHHHHhhhHHHHh
Confidence 999999999999999999999999999999999999986 477888888754 49999999999999999998877766
No 7
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=99.96 E-value=1.7e-28 Score=226.41 Aligned_cols=134 Identities=16% Similarity=0.318 Sum_probs=110.2
Q ss_pred HHhhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCe
Q psy67 159 ALKVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDG 236 (526)
Q Consensus 159 a~~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dG 236 (526)
+.+.+.++.|.||||||+||.++++. ....|++++++||++|+..+ ++.++|.|.||.+|
T Consensus 2 pe~l~~Gv~F~vkYLGs~eV~s~r~~------------------~~~~r~~~~~eAi~ri~~~~~~~~~~~V~L~IS~~g 63 (162)
T 4dbb_A 2 PEDLIDGIIFAANYLGSTQLLSDKTP------------------SKNVRMMQAQEAVSRIKPEGESQPMTEVDLFISTQR 63 (162)
T ss_dssp -CCCCCEEEEEEEEEEEEEEEESSCC------------------CHHHHHHHHHHHHHTCC-----CCCEEEEEEEESSE
T ss_pred chhccCCcEEEeEEEeEEEEcCCCCC------------------CcchhHHHHHHHHHHHHHhcCCCCCcEEEEEEECCE
Confidence 34556789999999999999988751 12346677777777776443 45789999999999
Q ss_pred EEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCC---cCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 237 LRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGT---TRRWMCHGFLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 237 IrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~s---t~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|+|+|++|++++++|+|++||||+.+ .++|+||++++. ..++.||||.|.+ |++|+++|||||++||++..+
T Consensus 64 Ikv~d~~t~~~i~~~~l~~ISf~a~~---~~~f~fIar~~~~~~~~~~~CHVF~~~~--A~~I~~tigqAF~~ay~~~l~ 138 (162)
T 4dbb_A 64 IKVLNADTQEPMMDHPLRTISYIADI---GNIVVLMARRRMPRSQYKMICHVFESED--AQLIAQSIGQAFSVAYQEFLR 138 (162)
T ss_dssp EEEEETTTCCEEEEEEGGGEEEEEEE---TTEEEEEEEECCSTTCEEEEEEEEECTT--HHHHHHHHHHHHHHHHGGGTT
T ss_pred EEEEECCCCcEEeeeecceeEEEEEC---CCEEEEEeccCCCCCCCcEEEEEEECCC--HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999975 479999999853 4799999999986 999999999999999997654
Q ss_pred hh
Q psy67 314 RD 315 (526)
Q Consensus 314 Re 315 (526)
..
T Consensus 139 ~~ 140 (162)
T 4dbb_A 139 AN 140 (162)
T ss_dssp C-
T ss_pred Hc
Confidence 44
No 8
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=99.95 E-value=6.9e-28 Score=219.51 Aligned_cols=116 Identities=24% Similarity=0.346 Sum_probs=104.1
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceE
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGF 269 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvF 269 (526)
+.++|||+++|++++||+++.+||++|+... +++++|.|.||++||.|+|.++++++.+++|++||||+.|+ |+++|
T Consensus 10 F~vkYLGsv~V~~p~G~~Vl~~Ai~ki~~~~~~~~~~~v~l~Vs~~gi~v~~~~t~e~l~~~~i~~ISFcg~~k-d~k~F 88 (140)
T 3dxe_A 10 FQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTILHQQTEAVLGECRVRFLSFLAVGR-DVHTF 88 (140)
T ss_dssp CEEEEEEEEEESCSCCHHHHHHHHHHHHHTCCGGGCEEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEECS-STTEE
T ss_pred EeeeecceEEECCCCcHHHHHHHHHHHHhcCCcCCCceEEEEEcCCEEEEEecCCcceeeeccEEEEeeeccCC-CCcEE
Confidence 4566667777778888999999999997654 35789999999999999999999999999999999999977 99999
Q ss_pred EEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 270 SYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 270 AFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
|||++++ +++|.||||.|++. |.+|++|||+||+++|++
T Consensus 89 afI~~~~-~~~f~CHvF~c~~~-A~~vs~aV~~Af~l~Yqk 127 (140)
T 3dxe_A 89 AFIMAAG-PASFCCHMFWCEPN-AASLSEAVQAACMLRYQK 127 (140)
T ss_dssp EEEEEEE-TTEEEEEEEEEESC-SHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-CccEEEEEEecCcc-hHHHHHHHHHHHHHHHHH
Confidence 9999997 89999999999864 889999999999999984
No 9
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=99.95 E-value=2.2e-27 Score=220.96 Aligned_cols=133 Identities=15% Similarity=0.295 Sum_probs=99.7
Q ss_pred heeEEEEEEEeeeEEeeccCchh------hHHhhhhceEecceEecccCcChHHHHHHHHHHHhc---CCCCcEEEEEEE
Q psy67 163 VLIYMFALCYLGCVEVYESRGMQ------VCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNS---RRRPVRAILYVS 233 (526)
Q Consensus 163 l~~~~FaVkYLGsvEV~e~rg~q------VV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKas---gKK~qKV~L~VS 233 (526)
+.++.|.|+||||+||.++++.. ++.+||.+|++...+. -++-|+. ..+.++|.|.||
T Consensus 5 ~~Gv~f~vkYLGs~eV~~~~g~~~~~R~~~~~eAi~rl~~~~~~~-------------~~r~k~~~g~~~~~~~V~L~IS 71 (172)
T 1aqc_A 5 IDGIIFAANYLGSTQLLSDKTPSKNVRMMQAQEAVSRIKMAQKLA-------------KSRKKAPEGESQPMTEVDLFIL 71 (172)
T ss_dssp TTCEEEEEEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHCC---------------------------CEEEEEEC
T ss_pred cCCceEEEEeceEEEecCCCCCCcchhHHHHHHHHHHHHHHHHhh-------------hccccccccccCCCcEEEEEEE
Confidence 35789999999999999887733 3555555444320000 0000110 124689999999
Q ss_pred CCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCC--------------------cCeeeEEEEEecCccH
Q psy67 234 GDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGT--------------------TRRWMCHGFLALKESG 293 (526)
Q Consensus 234 ~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~s--------------------t~rf~CHVF~C~K~kA 293 (526)
.+||+|+|++|++++++|+|++||||+.+ .++|+||++++. ..++.||||.|.+ |
T Consensus 72 ~~gikv~d~~t~~il~~~~l~~ISf~aD~---~~~FayIar~~~~~~~~~~n~~~~~~~~~~~~~~~~~CHVF~s~~--A 146 (172)
T 1aqc_A 72 TQRIKVLNADTQETMMDHPLRTISYIADI---GNIVVLMARRRIPRSNSQENVEASHPSQDGKRQYKMICHVFESED--A 146 (172)
T ss_dssp SSEEEEEETTTCCEEEEEEGGGEEEEEEE---TTEEEEEECCC----------------------CEEEEEEEECTT--H
T ss_pred CCeEEEEeCCCCceEeccccceEEEEeeC---CcEEEEEecCCCccccccccccccccccccCCCCcEEEEEEECcc--H
Confidence 99999999999999999999999999854 479999999874 2589999999985 9
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q psy67 294 ERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 294 q~Ia~AIGQAFkVAfErKqK 313 (526)
+.|+++|||||++||++.-+
T Consensus 147 ~~I~~tIGqAF~~ay~~~l~ 166 (172)
T 1aqc_A 147 QLIAQSIGQAFSVAYQEFLR 166 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999996543
No 10
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=99.94 E-value=3.4e-27 Score=213.83 Aligned_cols=116 Identities=22% Similarity=0.347 Sum_probs=103.8
Q ss_pred hhceEecceEecccCcChHHHHHHHHHHHhc--CCCCcEEEEEEECCeEEEEECCC-CceeeeeecceeEEEeeCCCCCc
Q psy67 191 LKVLRYLGCVEVYESRGMQVCEDALKVLRNS--RRRPVRAILYVSGDGLRVVDDET-KGLMVDQTIEKVSFCAPDRNHEK 267 (526)
Q Consensus 191 IrqLKYLGsVeV~e~rG~qV~eeAVkrIKas--gKK~qKV~L~VS~dGIrVVD~kT-KelL~s~pI~rISFCA~D~~d~K 267 (526)
.++++|||+++|+.++|++++.+||++|+.+ ++++++|.|.||++||.|.|.++ ++++.+++|++||||+.| .|++
T Consensus 17 ~f~vkyLGsv~V~~p~G~dV~~~Ai~~i~~~~~~~~~~~v~l~Vs~~gi~v~~~~~~~~~l~~~~l~~ISFc~~d-~~~k 95 (136)
T 1wgu_A 17 KFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVH 95 (136)
T ss_dssp CEEEEEEEEEECSCSSCSHHHHHHHHHHHHSSCTTTSCEEEEEEETTEEEEECSSCSSCEEEEEETTTEEEEEEC-SSTT
T ss_pred EEEEEecCcEEcCCCCcHHHHHHHHHHHHhccccccCceEEEEEccCEEEEEecCCCCceeccceEEEeeeEecC-CCCc
Confidence 4567777777788889999999999999764 35689999999999999999998 589999999999999997 7899
Q ss_pred eEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHH
Q psy67 268 GFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLE 309 (526)
Q Consensus 268 vFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfE 309 (526)
+||||++++ +++|.||||.|++ .|++|++||++||+++|+
T Consensus 96 ~FaFI~~~~-~~~f~CHvF~c~~-~A~~vs~aV~~A~~l~Y~ 135 (136)
T 1wgu_A 96 TFAFIMDTG-NQRFECHVFWCEP-NAANVSEAVQAACSGPSS 135 (136)
T ss_dssp CEEEEEECS-SSCEEEEEEECSS-CTHHHHHHHHHHHCCCCC
T ss_pred EEEEEEcCC-CccEEEEEEEcCc-chHHHHHHHHHHHHhhcC
Confidence 999999998 8999999999986 499999999999998875
No 11
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=99.94 E-value=5.5e-27 Score=222.27 Aligned_cols=115 Identities=22% Similarity=0.356 Sum_probs=102.2
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhc--CCCCcEEEEEEECCeEEEEECCC-CceeeeeecceeEEEeeCCCCCce
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNS--RRRPVRAILYVSGDGLRVVDDET-KGLMVDQTIEKVSFCAPDRNHEKG 268 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKas--gKK~qKV~L~VS~dGIrVVD~kT-KelL~s~pI~rISFCA~D~~d~Kv 268 (526)
++++|||+++|..++|++++.+||++|+.. ++++++|.|.||++||+|+|.++ ++++.+++|++||||+.| .|+++
T Consensus 18 F~vkYLGsv~V~~p~G~dV~~~Ai~kl~~~~~~~k~~~V~L~VS~~gI~v~d~~t~~e~l~~~~I~~ISFc~vd-~d~k~ 96 (185)
T 2ysz_A 18 FRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVHT 96 (185)
T ss_dssp EEEEEEEEEEESSSSCHHHHHHHHHHHHHHSCTTTSCEEEEEEETTEEEEEESSCSSCEEEEECTTTCCEEECC-SSTTE
T ss_pred EEEEecCcEEecCCCcHHHHHHHHHHHHhccccccCceEEEEEecCEEEEEecCCCcceeeeccEEEeeeeccC-CCCcE
Confidence 456666666677788899999999999754 35689999999999999999998 589999999999999998 78999
Q ss_pred EEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHH
Q psy67 269 FSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLE 309 (526)
Q Consensus 269 FAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfE 309 (526)
||||++++ +++|.||||+|++. |++|++||++||+++|+
T Consensus 97 FaFI~~~~-~~~f~CHVF~c~k~-A~~vs~aV~~Af~l~yQ 135 (185)
T 2ysz_A 97 FAFIMDTG-NQRFECHVFWCEPN-AANVSEAVQAACSGPSS 135 (185)
T ss_dssp EEEEEESS-SSCEEEEEEEESSC-STTHHHHHHHHHHSCCC
T ss_pred EEEEecCC-CccEEEEEEEccCc-hHHHHHHHHHHHHHHHH
Confidence 99999998 89999999999874 88999999999999887
No 12
>1n3h_A SHC transforming protein; free protein, beta sandwich, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.2 PDB: 1oy2_A 2l1c_A* 1shc_A*
Probab=99.94 E-value=8.7e-28 Score=230.23 Aligned_cols=85 Identities=18% Similarity=0.361 Sum_probs=79.3
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEe-eCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCA-PDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCA 303 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA-~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQA 303 (526)
.++|+|.||.+||+|+|.+|++++++|+|++||||+ .|+++.++|+||++++. +.+.||||.|....|++|+.+||||
T Consensus 119 ~~~V~L~IS~~gIkv~d~~t~~~i~~~~i~~ISf~a~~d~~~~~~FafIar~~~-~~~~CHVF~cs~~~A~~I~~tIgqA 197 (207)
T 1n3h_A 119 GMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPV-NQRACHILECPEGLAQDVISTIGQA 197 (207)
T ss_dssp SEEEEEEEETTEEEEEETTTTSCBCCCSCCCCSSSCSSSTTSSSCEEEEECCSS-SCCEEEEEECSSSTHHHHHHCCCCC
T ss_pred CceEEEEEECCeEEEEeCCCCceeeeeccceEEEEeccCCCcCCEEEEEecCCC-CCEEEEEEEcCHHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999999 78888899999999976 7899999999754599999999999
Q ss_pred HHHHHHH
Q psy67 304 FAACLER 310 (526)
Q Consensus 304 FkVAfEr 310 (526)
|++||++
T Consensus 198 F~lay~~ 204 (207)
T 1n3h_A 198 FELRFKQ 204 (207)
T ss_dssp CCCSSSS
T ss_pred HHHHHHH
Confidence 9999984
No 13
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=198.23 Aligned_cols=116 Identities=20% Similarity=0.241 Sum_probs=97.9
Q ss_pred hceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEEC-----CCCceeeeeecceeEEEeeCCC
Q psy67 192 KVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDD-----ETKGLMVDQTIEKVSFCAPDRN 264 (526)
Q Consensus 192 rqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~-----kTKelL~s~pI~rISFCA~D~~ 264 (526)
++++|||+++|++++||+++.+||.+|+.+. +++++|.|.||+.||+|+|. .+++++.+++|++||||+.+ .
T Consensus 18 f~~kyLGsv~V~~~~G~dVln~Ai~~l~~~~~~~~w~~v~l~Vs~~~i~v~~~~~~~~~~~~~l~~c~vr~ISFcgvg-k 96 (144)
T 2dyq_A 18 YEALYMGTLPVTKAMGMDVLNEAIGTLTARGDRNAWVPTMLSVSDSLMTAHPIQAEASTEEEPLWQCPVRLVTFIGVG-R 96 (144)
T ss_dssp CEEEEEEEEEESSSCCHHHHHHHHHHHHCCCSSCCCEEEEEEECSSEEEEEECC------CCCSSEEEGGGEEEEEEC-S
T ss_pred EEEEEeccEEecCccCHHHHHHHHHHHHhcCCcccCcceEEEEeccceEEeccccccccccceeeeceEEEEeeeecC-C
Confidence 3566666666777788888888888886533 35799999999999999998 48899999999999999995 5
Q ss_pred CCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 265 HEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 265 d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
|.+.||||++ ...++|.||||.|+. .|.+|+.||++||++.|++
T Consensus 97 d~r~FaFI~~-~~~~~f~CHVF~ce~-~A~~ls~aV~~Ac~l~Yqk 140 (144)
T 2dyq_A 97 DPHTFGLIAD-LGRQSFQCAAFWCQP-HAGGLSEAVQAACMVQYQK 140 (144)
T ss_dssp STTEEEEEEE-CSSSCEEEEEEECSS-CTHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEe-CCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHHH
Confidence 8899999995 557899999999975 5999999999999999984
No 14
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=99.91 E-value=4.2e-24 Score=196.36 Aligned_cols=127 Identities=20% Similarity=0.298 Sum_probs=104.7
Q ss_pred eEEEEEEEeeeEEeecc-----CchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCeEEE
Q psy67 165 IYMFALCYLGCVEVYES-----RGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRRRPVRAILYVSGDGLRV 239 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~-----rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dGIrV 239 (526)
.++|+||||||+||.++ +++.+|++||++|++.-.-.-.... .+|. ..+++.|.|+.++|+|
T Consensus 2 ~~~F~Vr~LG~vEv~e~~~~p~r~s~~v~~~ir~L~~~~~~~~d~~~----------~~wg---~gq~~~L~v~~~tlrL 68 (148)
T 3d8d_A 2 IKCFAVRSLGWVEMTEEELAPGRSSVAVNNCIRQLSYHKNNLHDPMS----------GGWG---EGKDLLLQLEDETLKL 68 (148)
T ss_dssp CEEEEEEEEEEEECCGGGGSTTTHHHHHHHHHHHHTTCCCCCCCTTS----------TTCS---TTCEEEEEEETTEEEE
T ss_pred ceeEEeeecccEEEecccCCccccHHHHHHHHHHHHhcccccccccc----------cccc---cCceEEEEEcCCeEEE
Confidence 47899999999999999 8999999999999864211000000 1121 1379999999999999
Q ss_pred EECCCCceeeeeecceeEEEeeCCCCCc--eEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHH
Q psy67 240 VDDETKGLMVDQTIEKVSFCAPDRNHEK--GFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFA 305 (526)
Q Consensus 240 VD~kTKelL~s~pI~rISFCA~D~~d~K--vFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFk 305 (526)
+|+.|+.+|++|||++|+||++++++.+ .||||++++++.+|+||||.|+. .|+.|+.||..+-.
T Consensus 69 vD~~tk~~L~~~pI~~I~f~~~gr~~~~~~dFAfv~rd~~t~~~~CHvFrCe~-~a~~Ia~al~~~c~ 135 (148)
T 3d8d_A 69 VEPQSQALLHAQPIISIRVWGVGRDSGRERDFAYVARDKLTQMLKCHVFRCEA-PAKNIATSLHEICS 135 (148)
T ss_dssp ECTTTCCEEEEEEGGGCCEEEECCCC--CCEEEEEEECTTTCCEEEEEEEESS-CHHHHHHHHHHHHH
T ss_pred ecCCCCceEEEeeEEEEEEEeCCCCCCccccEEEEEecCCCcceEeEEEEcCC-chHHHHHHHHHHHH
Confidence 9999999999999999999999998876 89999999999999999999985 59999999988643
No 15
>2yt0_A Amyloid beta A4 protein and amyloid beta A4 precursor protein-binding family B member...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus} PDB: 2yt1_A
Probab=99.90 E-value=2.3e-23 Score=196.20 Aligned_cols=104 Identities=23% Similarity=0.388 Sum_probs=94.6
Q ss_pred cceEecccCcChHHHHHHHHHHHhc--CCCCcEEEEEEECCeEEEEECCC-CceeeeeecceeEEEeeCCCCCceEEEEE
Q psy67 197 LGCVEVYESRGMQVCEDALKVLRNS--RRRPVRAILYVSGDGLRVVDDET-KGLMVDQTIEKVSFCAPDRNHEKGFSYIC 273 (526)
Q Consensus 197 LGsVeV~e~rG~qV~eeAVkrIKas--gKK~qKV~L~VS~dGIrVVD~kT-KelL~s~pI~rISFCA~D~~d~KvFAFIA 273 (526)
||+++|..++|++++.+||++|+.. ++++++|.|.||++||.|+|.++ ++++.+++|++||||+.| .|+++||||+
T Consensus 69 LGsv~V~~p~G~dVl~~AI~kl~~~~~~~~~~~V~L~VS~~gI~v~d~~t~~evl~~c~l~~ISFcgvd-~d~k~FaFI~ 147 (176)
T 2yt0_A 69 LGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVADATVTVISEKNEEEVLVECRVRFLSFMGVG-KDVHTFAFIM 147 (176)
T ss_dssp EEEEECSCSSCHHHHHHHHHHHHHHSCTTTSCEEEEECGGGEEEEEESSCTTCEEEEEETTTCCEEEEC-SSTTEEEEEE
T ss_pred cCceEccCCccHHHHHHHHHHHHhccCcccCcceEEEEcCCEEEEEecCCCcceecccceEEeeeEccC-CCCcEEEEEE
Confidence 7777788899999999999999754 35689999999999999999998 589999999999999998 7899999999
Q ss_pred ecCCcCeeeEEEEEecCccHHHHHHHHHHH
Q psy67 274 RDGTTRRWMCHGFLALKESGERLSHAVGCA 303 (526)
Q Consensus 274 Rd~st~rf~CHVF~C~K~kAq~Ia~AIGQA 303 (526)
+++ +++|.||||+|++. |.+|+.||+.|
T Consensus 148 ~~~-~~~f~CHVF~cek~-A~~ls~aI~aA 175 (176)
T 2yt0_A 148 DTG-NQRFECHVFWCEPN-AANVSEAVQAA 175 (176)
T ss_dssp EEE-TTEEEEEEEEESSC-SHHHHHHHHHH
T ss_pred eCC-CCCEEEEEEEccCC-hhHHHHHHHhh
Confidence 998 89999999999864 99999999987
No 16
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.89 E-value=1.2e-22 Score=208.56 Aligned_cols=130 Identities=18% Similarity=0.362 Sum_probs=103.9
Q ss_pred hhheeEEEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHHhc---------------CCCC
Q psy67 161 KVVLIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLRNS---------------RRRP 225 (526)
Q Consensus 161 ~~l~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKas---------------gKK~ 225 (526)
..+-+++|.||||||+||.++++. ..+.+|+++++||++|+.. ...+
T Consensus 4 ~l~~gv~f~~kylG~~~v~s~~~~------------------~~~~r~~~~~eai~rv~~~~k~~~~~~~~~~~~~~~~~ 65 (388)
T 3suz_A 4 DLIDGIIFAANYLGSTQLLSERNP------------------SKNIRMMQAQEAVSRVKRMQKAAKIKKKANSEGDAQTL 65 (388)
T ss_dssp HHHHCEEEEEEEEEEEEEEECSSC------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCSS
T ss_pred cccCCcEEeeeEeeeeeccCCCCC------------------CccchHHHHHHHHHHHHHHHhhccccccCCCccccccc
Confidence 345689999999999999877751 2233455555555555431 1346
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcC--------------------eeeEEE
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTR--------------------RWMCHG 285 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~--------------------rf~CHV 285 (526)
++|.|+||.+||+|+|.+|++++++|+|++||||+. +.++|+||+++.... +|+|||
T Consensus 66 ~~v~l~IS~~gi~v~~~~t~~~~~~~~l~~IS~~~d---~~~~~~~iak~~~~~~~~~~~~~~~~~~~~~~~~~~~~Chv 142 (388)
T 3suz_A 66 TEVDLFISTQRIKVLNADTQETMMDHALRTISYIAD---IGNIVVLMARRRMPRSASQDCIETTPGAQEGKKQYKMICHV 142 (388)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGEEEEEE---CSSEEEEEEEECCCCCC-------------CCCCEEEEEEE
T ss_pred ceEEEEEEeceEEEEecCCcChhhhccccceeEEee---cCceEEEEEecCCCccccccccccCccccccccccceEEEE
Confidence 899999999999999999999999999999999954 557999999986544 366999
Q ss_pred EEecCccHHHHHHHHHHHHHHHHHHhhh
Q psy67 286 FLALKESGERLSHAVGCAFAACLERKQK 313 (526)
Q Consensus 286 F~C~K~kAq~Ia~AIGQAFkVAfErKqK 313 (526)
|.|++ |+.|+++|+|||+++|++.-+
T Consensus 143 F~s~~--a~~i~~ti~qaf~~~y~~~l~ 168 (388)
T 3suz_A 143 FESED--AQLIAQSIGQAFSVAYQEFLR 168 (388)
T ss_dssp EECTT--HHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccC--HHHHHHHHHHHHHHHhhhhcc
Confidence 99974 999999999999999986543
No 17
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=99.81 E-value=2.9e-19 Score=162.08 Aligned_cols=113 Identities=21% Similarity=0.301 Sum_probs=93.6
Q ss_pred hhhceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEECCCCc-eeeeeecceeEEEeeCCCC-
Q psy67 190 ALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDDETKG-LMVDQTIEKVSFCAPDRNH- 265 (526)
Q Consensus 190 AIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~kTKe-lL~s~pI~rISFCA~D~~d- 265 (526)
|.++++|||+++|+..+|.+++.+||.++.+.. .++++|+|.||.+||+|+|..++. ...+||+++||||+.|+.+
T Consensus 2 aacnV~yLgSvevesltG~~av~~Ai~~~l~~~~~~~~t~vh~kVS~qGItLtD~~rk~ffRrhypl~~VsfCa~dP~~r 81 (134)
T 1wvh_A 2 AACNVLFINSVEMESLTGPQAISKAVAETLVADPTPTATIVHFKVSAQGITLTDNQRKLFFRRHYPLNTVTFCDLDPQER 81 (134)
T ss_dssp CEEEEEEEEEEEEETCCHHHHHHHHHHHHHTCSSCCCCEEEEEEEETTEEEEEESSSCSSCEEEEEGGGEEEEEECTTCC
T ss_pred CceEEEEEEEEEecCCcCHHHHHHHHHHHHhcCCCCCCeEEEEEEEcCCCeEEccCcceEEEEecccCcEEEecCCcccc
Confidence 456778888888888888888888888887544 368999999999999999999998 4789999999999999986
Q ss_pred ----------CceEEEEEecCC-cCeeeEEEEEecCc--cHHHHHHHHHH
Q psy67 266 ----------EKGFSYICRDGT-TRRWMCHGFLALKE--SGERLSHAVGC 302 (526)
Q Consensus 266 ----------~KvFAFIARd~s-t~rf~CHVF~C~K~--kAq~Ia~AIGQ 302 (526)
.++||||+|++. ...+.||||..... .|.+|+..|..
T Consensus 82 ~w~~~~~~~~~riFGFVar~~~~~~~n~CHvF~e~d~~qpa~~Iv~~v~~ 131 (134)
T 1wvh_A 82 KWTKTDGSGPAKLFGFVARKQGSTTDNVCHLFAELDPDQPAAAIVNFVSR 131 (134)
T ss_dssp EEECSSSSCEEEEEEEEECC-CCTTCEEEEEEEECCTTSCHHHHHHHHHH
T ss_pred cccccccCCCceEEEEEEccCCCCCCeeEEEecccCCCCCHHHHHHHHHh
Confidence 489999999875 47899999976433 38888887654
No 18
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=99.76 E-value=4.7e-18 Score=157.67 Aligned_cols=116 Identities=19% Similarity=0.292 Sum_probs=96.5
Q ss_pred HhhhhceEecceEecccCcChHHHHHHHHHHHhcC--CCCcEEEEEEECCeEEEEECCCCcee-eeeecceeEEEeeCCC
Q psy67 188 EDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSR--RRPVRAILYVSGDGLRVVDDETKGLM-VDQTIEKVSFCAPDRN 264 (526)
Q Consensus 188 ~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasg--KK~qKV~L~VS~dGIrVVD~kTKelL-~s~pI~rISFCA~D~~ 264 (526)
..|.++++|||+++|+..+|.++++.||..+.... .++++|.|.||.+||+|+|...+..+ .+||+++||||+.|+.
T Consensus 12 qgaacnv~yLgSvevesltG~~av~kAv~~~l~~~~~~~~t~V~fkVS~qGItLtD~~rK~FfrrHypl~~IsFC~~DP~ 91 (157)
T 3hqc_A 12 QGAACSVLYLTSVETESLTGPQAVARASSAALSCSPRPTPAVVHFKVSAQGITLTDNQRKLFFRRHYPVNSITFSSTDPQ 91 (157)
T ss_dssp HCEEEEEEEEEEEECTTCCHHHHHHHHHHHHHHCC---CCEEEEEEEETTEEEEEEEETTEEEEEEEEGGGEEEEEECTT
T ss_pred cCCeeeEEEeceEecCCCCChHHHHHHHHHHHhcCCCCCCeEEEEEEeCCCceEEecccceeehhcCcccceEeecCChh
Confidence 45677888888888999999999999999886543 47899999999999999999888764 5689999999999998
Q ss_pred CC----------ceEEEEEecCCc-CeeeEEEEEecCc--cHHHHHHHHHHH
Q psy67 265 HE----------KGFSYICRDGTT-RRWMCHGFLALKE--SGERLSHAVGCA 303 (526)
Q Consensus 265 d~----------KvFAFIARd~st-~rf~CHVF~C~K~--kAq~Ia~AIGQA 303 (526)
+. ++||||+|.+.. ..+.||+|....+ .|.+|+.-|...
T Consensus 92 ~r~w~~~~~~~~riFGFVARk~~s~~~n~CHlFae~dp~QPAsaIvnfv~kv 143 (157)
T 3hqc_A 92 DRRWTNPDGTTSKIFGFVAKKPGSPWENVCHLFAELDPDQPAGAIVTFITKV 143 (157)
T ss_dssp CCEEECTTSCEEEEEEEEEEETTEEEEEEEEEEECCBTTBCHHHHHHHHHHH
T ss_pred hccccccCCCcccEEEEEEccCCCCCCeeEEEeeccCCCCCHHHHHHHHHHH
Confidence 74 799999998764 5899999987433 388888776653
No 19
>4dx8_A Integrin beta-1-binding protein 1; protein-protien complex, PTB domain, nudix fold, protein-Pro interaction, membrane, nucleus, protein binding; 2.54A {Homo sapiens} PDB: 4dx9_A
Probab=99.10 E-value=3.5e-09 Score=97.86 Aligned_cols=85 Identities=14% Similarity=0.202 Sum_probs=73.3
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeE--EEeeCCC-CCc-eEEEEEecCCcCeeeEEEEEecCc-cHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVS--FCAPDRN-HEK-GFSYICRDGTTRRWMCHGFLALKE-SGERLSHAV 300 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rIS--FCA~D~~-d~K-vFAFIARd~st~rf~CHVF~C~K~-kAq~Ia~AI 300 (526)
.+|.|.||..||+|.|.++..+++.+||+.|. .|-.|.- +.+ +|+..+.++.+..+.||||+|... .|+.|+..+
T Consensus 62 Edvi~svSkyGvkl~~~d~~dvl~RipL~~I~~~v~YdDg~g~g~~vla~KT~~~~~~~~~~hv~Qc~s~~~A~~iC~~l 141 (154)
T 4dx8_A 62 EEFIMGVSKYGIKVSTSDQYDVLHRHALYLIIRMVCYDDGLGAGKSLLALKTTDASNEEYSLWVYQCNSLEQAQAICKVL 141 (154)
T ss_dssp CCEEEEEETTEEEEEETTSCCEEEEEEGGGEEEEEEEECCSSSCCEEEEEEEECTTSCCEEEEEEEESSHHHHHHHHHHH
T ss_pred CeEEEEEeccCcEEEeccCcccccchhHHHhhhheeeccccccccEEEEEEecCCCCceEEEEEEEcCCHHHHHHHHHHH
Confidence 57999999999999999999999999999998 4555554 333 778888888899999999999876 399999999
Q ss_pred HHHHHHHHHH
Q psy67 301 GCAFAACLER 310 (526)
Q Consensus 301 GQAFkVAfEr 310 (526)
+.+|..|+-.
T Consensus 142 ~~~f~~~~~~ 151 (154)
T 4dx8_A 142 STAFDSVLTS 151 (154)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhh
Confidence 9999999853
No 20
>2cy5_A Epidermal growth factor receptor pathway substrate 8-like protein 1; structural genomics, signal transduction, phosphorylation, PTB domain, NPPSFA; 1.90A {Mus musculus} SCOP: b.55.1.2 PDB: 2cy4_A
Probab=99.01 E-value=4e-09 Score=96.41 Aligned_cols=117 Identities=16% Similarity=0.196 Sum_probs=92.3
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceEecceEecccCcChHHHHHHHHHHH---hcC-CCCcEEEEEEECCeEEEEEC
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLRYLGCVEVYESRGMQVCEDALKVLR---NSR-RRPVRAILYVSGDGLRVVDD 242 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIK---asg-KK~qKV~L~VS~dGIrVVD~ 242 (526)
.|.|..|-...|....+... +++||++|+ +.| -+.++|.|.|...+|.++|.
T Consensus 10 qy~VeHL~Tf~l~~~~~~~~------------------------~~D~irkL~~ld~kg~iW~Q~m~L~v~~~~v~LlD~ 65 (140)
T 2cy5_A 10 QYHVNHLVTFCLGEEDGVHT------------------------VEDASRKLAVMDSQGRVWAQEMLLRVSPSQVTLLDP 65 (140)
T ss_dssp EEEEEEEEEEECCTTSSCCS------------------------HHHHHHHHHHHHHTTCCCCEEEEEEECSSEEEEECT
T ss_pred cEEEeeeEEEEeCCcCCcCC------------------------HHHHHHHHHhHHHcCCcccceeEEEECCCeEEEEcc
Confidence 46666666666655544444 455555554 334 46789999999999999999
Q ss_pred CCCceeeeeecceeEEEee---CCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHH
Q psy67 243 ETKGLMVDQTIEKVSFCAP---DRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAAC 307 (526)
Q Consensus 243 kTKelL~s~pI~rISFCA~---D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVA 307 (526)
.|++.+.+||+..|-.|.+ ....+.++.|+++++......-|+|+|+.-.|+.|...|..|.+-.
T Consensus 66 et~eelE~fpl~~I~~~~av~~~~~y~siLllv~q~~~~~~~~iH~FQc~ev~A~~v~~di~~al~~~ 133 (140)
T 2cy5_A 66 VSKEELESYPLDAIVRCDAVMPRGRSRSLLLLVCQEPERAQPDVHFFQGLLLGAELIREDIQGALQNY 133 (140)
T ss_dssp TTCCEEEEEEGGGEEEEEEECCSSCSSCEEEEEECCTTCSSCEEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred CccchhhcCChhhceeccccCCccccCcEEEEEEecCCCCCccEEEEEeccccHHHHHHHHHHHHHHh
Confidence 9999999999999999964 3445679999999998888999999998767999999988877543
No 21
>2ej8_A DCC-interacting protein 13 alpha; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.84A {Homo sapiens}
Probab=97.41 E-value=0.00025 Score=64.92 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=76.3
Q ss_pred HhhhhceEecceEecccCcChHHHHHHHHHHHhcCC-CCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCC
Q psy67 188 EDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRR-RPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHE 266 (526)
Q Consensus 188 ~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgK-K~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~ 266 (526)
....+.++|||+++|..++|++++.+||++|+.... +... ....+....+...|..+..+....
T Consensus 14 ~~~~f~vkYLGs~eV~~~~g~~~~~~Ai~~l~~~~~~~~~~---------------~~~~v~L~VS~~gi~l~d~~tk~~ 78 (160)
T 2ej8_A 14 LHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHNIF---------------RMTESHLLVTCDCLKLIDPQTQVT 78 (160)
T ss_dssp CEEEEEEEEEEEEEECCCSCTHHHHHHHHHHHHHHHHTTCC---------------CCCEEEEEEESSEEEEECTTTCCE
T ss_pred cccEEEEEeeeEEEeCCCCCHHHHHHHHHHHHHhhcccccC---------------cCCEEEEEEECCeEEEEeCCCCeE
Confidence 345688999999999999999999999999986532 2211 223344556667777765544331
Q ss_pred ------ceEEEEEecCCcCeeeEEEEEec------Cc-------cHHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 267 ------KGFSYICRDGTTRRWMCHGFLAL------KE-------SGERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 267 ------KvFAFIARd~st~rf~CHVF~C~------K~-------kAq~Ia~AIGQAFkVAfErKqKRek 316 (526)
.-.+|++.|+...++..++..-. .. .....+..|.+++..||+..-++-.
T Consensus 79 ~~~~~i~~ISfca~d~~~~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tigqAF~~ay~~~l 147 (160)
T 2ej8_A 79 RLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAEL 147 (160)
T ss_dssp EEEEEGGGEEEEEEETTEEEEEEEEEEECC------CEEEEEEEEESSCHHHHHHHHHHHHHHHHHHC-
T ss_pred EEEeeCCeEEEEEecCCCCeEEEEEEecCCcccCCCccEEEEEEEcchhHHHHHHHHHHHHHHHHHHHH
Confidence 23489999887665554444432 11 1444899999999999996554443
No 22
>2ela_A Adapter protein containing PH domain, PTB domain and leucine zipper motif 1; APPL, cell cycle; 2.00A {Homo sapiens}
Probab=97.31 E-value=0.00027 Score=65.99 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=76.1
Q ss_pred HhhhhceEecceEecccCcChHHHHHHHHHHHhcCC-CCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCC
Q psy67 188 EDALKVLRYLGCVEVYESRGMQVCEDALKVLRNSRR-RPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHE 266 (526)
Q Consensus 188 ~eAIrqLKYLGsVeV~e~rG~qV~eeAVkrIKasgK-K~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~ 266 (526)
....+.++|||+++|..++|++++.+||++|+.... +... ....+....+...|..+..+....
T Consensus 27 ~~~~f~vkYLGs~eV~~~~g~~v~~eAi~~l~~~~~~~~~~---------------~~~~V~L~VS~~gI~l~d~~tk~~ 91 (175)
T 2ela_A 27 LHQLFIVRFLGSMEVKSDDHPDVVYETMRQILAARAIHNIF---------------RMTESHLLVTCDCLKLIDPQTQVT 91 (175)
T ss_dssp CCEEEEEEEEEEEEECSCCSTHHHHHHHHHHHHHHHHTTCC---------------CCEEEEEEECSSEEEEECTTTCCE
T ss_pred ccceEEEEcceEEEecCCCCHHHHHHHHHHHHHhhcccccc---------------cCCEEEEEEECCeEEEEeCCCCcE
Confidence 456788999999999999999999999999986532 2211 122334455566666665443321
Q ss_pred ------ceEEEEEecCCcCeeeEEEEEec------Cc-------cHHHHHHHHHHHHHHHHHHhhhhhh
Q psy67 267 ------KGFSYICRDGTTRRWMCHGFLAL------KE-------SGERLSHAVGCAFAACLERKQKRDK 316 (526)
Q Consensus 267 ------KvFAFIARd~st~rf~CHVF~C~------K~-------kAq~Ia~AIGQAFkVAfErKqKRek 316 (526)
.-.+|++.|+...++..++..-. .. ..+..+..|..++..||+..-+.-.
T Consensus 92 i~~~~i~~ISfca~d~~d~r~FafIar~~~~~~~~~~~~~CHVF~~~~~A~~I~~tIgqAF~~ay~~~l 160 (175)
T 2ela_A 92 RLTFPLPCVVLYATHQENKRLFGFVLRTSSGRSESNLSSVCYIFESNNEGEKICDSVGLAKQIALHAEL 160 (175)
T ss_dssp EEEEEGGGEEEEEEETTEEEEEEEEEEEC-------CEEEEEEEEESSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCEEEEEEeCCCCCcEEEEEEecCccccCCCcceEEEEEEcchhHHHHHHHHHHHHHHHHHHHH
Confidence 23489999987666555544432 11 1444899999999999997654444
No 23
>3d8d_A Amyloid beta A4 precursor protein-binding family 1; alpha-beta structure, phosphotyrosine binding domain; 2.20A {Homo sapiens} PDB: 3d8e_A 3d8f_A
Probab=96.57 E-value=0.0016 Score=60.15 Aligned_cols=24 Identities=25% Similarity=0.387 Sum_probs=22.7
Q ss_pred ccceeeeecc-----ccchhhHHHHhhhe
Q psy67 141 YLGCVEVYES-----RGMQVCEDALKVVL 164 (526)
Q Consensus 141 ~~g~~ev~es-----~g~~~c~~a~~~l~ 164 (526)
|||++||.|+ +||..|.++++.+.
T Consensus 9 ~LG~vEv~e~~~~p~r~s~~v~~~ir~L~ 37 (148)
T 3d8d_A 9 SLGWVEMTEEELAPGRSSVAVNNCIRQLS 37 (148)
T ss_dssp EEEEEECCGGGGSTTTHHHHHHHHHHHHT
T ss_pred ecccEEEecccCCccccHHHHHHHHHHHH
Confidence 9999999999 99999999998886
No 24
>1ntv_A Disabled homolog 1; beta-sandwich, signaling protein; 1.50A {Mus musculus} SCOP: b.55.1.2 PDB: 1nu2_A* 1oqn_A*
Probab=96.55 E-value=0.0012 Score=59.88 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=26.8
Q ss_pred cchhcccceeeeeccccchhhHHHHhhhee
Q psy67 136 ASAFKYLGCVEVYESRGMQVCEDALKVVLI 165 (526)
Q Consensus 136 ~~~~~~~g~~ev~es~g~~~c~~a~~~l~~ 165 (526)
.+..+|||++||.++.|+.+|.+|++.|+.
T Consensus 19 ~f~vkYLGs~eV~~~~g~~v~~eA~~~i~~ 48 (152)
T 1ntv_A 19 RYKAKLIGIDEVSAARGDKLCQDSMMKLKG 48 (152)
T ss_dssp EEEEEEEEEEECSSSCCHHHHHHHHHHHHH
T ss_pred EEEEEeCCeEEecCCCCchHHHHHHHHHHH
Confidence 466789999999999999999999999874
No 25
>3dxe_A Amyloid beta A4 protein-binding family B member 1; alzheimer'S disease, APP, AICD, Fe65, PTB domain, alternative splicing, polymorphism, alzheimer disease, apoptosis; 2.00A {Homo sapiens} SCOP: b.55.1.0 PDB: 3dxd_A 3dxc_A
Probab=96.42 E-value=0.0013 Score=59.94 Aligned_cols=119 Identities=16% Similarity=0.245 Sum_probs=69.3
Q ss_pred eeEEEEEEEeeeEEeeccCchhhHHhhhhceEecce------Eec-ccCcChHHHHHHHHHHHhcCCCCcEEEEEEECCe
Q psy67 164 LIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGC------VEV-YESRGMQVCEDALKVLRNSRRRPVRAILYVSGDG 236 (526)
Q Consensus 164 ~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGs------VeV-~e~rG~qV~eeAVkrIKasgKK~qKV~L~VS~dG 236 (526)
+...|.|+|||+++|.+++|++++++||.+++-... +.+ -.+.|..+ ......++...++..-
T Consensus 6 ~~~~F~vkYLGsv~V~~p~G~~Vl~~Ai~ki~~~~~~~~~~~v~l~Vs~~gi~v----------~~~~t~e~l~~~~i~~ 75 (140)
T 3dxe_A 6 LVQKFQVYYLGNVPVAKPVGVDVINGALESVLSSSSREQWTPSHVSVAPATLTI----------LHQQTEAVLGECRVRF 75 (140)
T ss_dssp ----CEEEEEEEEEESCSCCHHHHHHHHHHHHHTCCGGGCEEEEEEECSSEEEE----------EETTTCCEEEEEEGGG
T ss_pred hhheEeeeecceEEECCCCcHHHHHHHHHHHHhcCCcCCCceEEEEEcCCEEEE----------EecCCcceeeeccEEE
Confidence 467899999999999999999999999998864311 000 00111100 0011223444444444
Q ss_pred EEEEECCCCceeeeeecceeEEEeeCCCCCc--eEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHHhh
Q psy67 237 LRVVDDETKGLMVDQTIEKVSFCAPDRNHEK--GFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLERKQ 312 (526)
Q Consensus 237 IrVVD~kTKelL~s~pI~rISFCA~D~~d~K--vFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfErKq 312 (526)
|...-.. -..+-.+|++.+. +.+ +.+|.+.... ..-++.|-.|.-.+++.+++.+.
T Consensus 76 ISFcg~~-------kd~k~FafI~~~~-~~~f~CHvF~c~~~A------------~~vs~aV~~Af~l~Yqk~l~~~~ 133 (140)
T 3dxe_A 76 LSFLAVG-------RDVHTFAFIMAAG-PASFCCHMFWCEPNA------------ASLSEAVQAACMLRYQKCLDARS 133 (140)
T ss_dssp EEEEEEC-------SSTTEEEEEEEEE-TTEEEEEEEEEESCS------------HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EeeeccC-------CCCcEEEEEecCC-CccEEEEEEecCcch------------HHHHHHHHHHHHHHHHHHHhhhh
Confidence 4443321 1356678888776 444 5566665432 12477888888899999998543
No 26
>3so6_A LDL receptor adaptor protein; PTB, endocytic adaptor, autosomal reces hypercholesterolemia, ARH, cholesterol; 1.37A {Rattus norvegicus}
Probab=96.14 E-value=0.0026 Score=55.57 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=30.5
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhceEec
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVLRYL 197 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYL 197 (526)
++.|.|+|||+++|.+++|++++.+||.+|+..
T Consensus 3 g~~f~v~YLGs~~v~~~~g~~~~~~Av~~l~~~ 35 (137)
T 3so6_A 3 GMVFSLKYLGMTLVERPKGEELSAAAVKRIVAT 35 (137)
T ss_dssp CEEEEEEEEEEEEESSSCCHHHHHHHHHHHHHH
T ss_pred ccEEEEEEeeEEEecCCCChhHHHHHHHHHHHH
Confidence 679999999999999999999999999988653
No 27
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=96.04 E-value=0.0024 Score=58.66 Aligned_cols=32 Identities=25% Similarity=0.434 Sum_probs=29.4
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhceEe
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVLRY 196 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKY 196 (526)
.+.|.|+|||++||..++||+++++||.+|+.
T Consensus 15 ~~~f~~kyLGsv~V~~~~G~dVln~Ai~~l~~ 46 (144)
T 2dyq_A 15 AQKYEALYMGTLPVTKAMGMDVLNEAIGTLTA 46 (144)
T ss_dssp CCCCEEEEEEEEEESSSCCHHHHHHHHHHHHC
T ss_pred hhEEEEEEeccEEecCccCHHHHHHHHHHHHh
Confidence 56799999999999999999999999999854
No 28
>1p3r_A Disabled homolog 2; PTB, signaling protein; 2.10A {Mus musculus} SCOP: b.55.1.2 PDB: 1m7e_A
Probab=96.03 E-value=0.003 Score=57.78 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=27.0
Q ss_pred cchhcccceeeeeccccchhhHHHHhhhee
Q psy67 136 ASAFKYLGCVEVYESRGMQVCEDALKVVLI 165 (526)
Q Consensus 136 ~~~~~~~g~~ev~es~g~~~c~~a~~~l~~ 165 (526)
.+..+|||+++|.++.|+.+|.+|++.|+.
T Consensus 18 ~f~vkYLGs~~V~~~~g~~~~~eA~~~i~~ 47 (160)
T 1p3r_A 18 KYKAKLIGIDDVPDARGDKMSQDSMMKLKG 47 (160)
T ss_dssp EEEEEEEEEEEESSSCCHHHHHHHHHHHHH
T ss_pred EEEEEeceeEEecCCCChHHHHHHHHHHHH
Confidence 456689999999999999999999999876
No 29
>1wgu_A APBB2, amyloid beta (A4) precursor protein-bindin, family B, member 2; phosphotyrosine-interaction domain, amyloid disease, structural genomics; NMR {Mus musculus} SCOP: b.55.1.2 PDB: 2roz_B
Probab=95.82 E-value=0.0036 Score=56.69 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=30.2
Q ss_pred eeEEEEEEEeeeEEeeccCchhhHHhhhhceEe
Q psy67 164 LIYMFALCYLGCVEVYESRGMQVCEDALKVLRY 196 (526)
Q Consensus 164 ~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKY 196 (526)
....|.|+|||+++|.+++|++++++||.+|+.
T Consensus 14 ~~~~f~vkyLGsv~V~~p~G~dV~~~Ai~~i~~ 46 (136)
T 1wgu_A 14 LVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMT 46 (136)
T ss_dssp CCCCEEEEEEEEEECSCSSCSHHHHHHHHHHHH
T ss_pred CceEEEEEecCcEEcCCCCcHHHHHHHHHHHHh
Confidence 467899999999999999999999999998864
No 30
>2ysz_A Amyloid beta A4 precursor protein-binding family B member 2 and amyloid beta A4 protein...; chimera, Fe65L, PID domain, amyloid precursor protein; NMR {Mus musculus}
Probab=95.64 E-value=0.0055 Score=58.27 Aligned_cols=118 Identities=15% Similarity=0.148 Sum_probs=69.8
Q ss_pred eeEEEEEEEeeeEEeeccCchhhHHhhhhceEecce--------EecccCcChHHHHHHHHHHHhcCCCC-cEEEEEEEC
Q psy67 164 LIYMFALCYLGCVEVYESRGMQVCEDALKVLRYLGC--------VEVYESRGMQVCEDALKVLRNSRRRP-VRAILYVSG 234 (526)
Q Consensus 164 ~~~~FaVkYLGsvEV~e~rg~qVV~eAIrqLKYLGs--------VeV~e~rG~qV~eeAVkrIKasgKK~-qKV~L~VS~ 234 (526)
....|.|+|||+++|.+++|++++++||.+|+.... +.|. +.|..+ ...+. .++...+..
T Consensus 14 ~~~~F~vkYLGsv~V~~p~G~dV~~~Ai~kl~~~~~~~k~~~V~L~VS-~~gI~v----------~d~~t~~e~l~~~~I 82 (185)
T 2ysz_A 14 LVQKFRVQYLGMLPVDRPVGMDTLNSAIENLMTSSSKEDWPSVNMNVA-DATVTV----------ISEKNEEEVLVECRV 82 (185)
T ss_dssp CCEEEEEEEEEEEEESSSSCHHHHHHHHHHHHHHSCTTTSCEEEEEEE-TTEEEE----------EESSCSSCEEEEECT
T ss_pred cceEEEEEecCcEEecCCCcHHHHHHHHHHHHhccccccCceEEEEEe-cCEEEE----------EecCCCcceeeeccE
Confidence 467899999999999999999999999998865311 0010 001000 00011 123334443
Q ss_pred CeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHHHHHHHH
Q psy67 235 DGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAFAACLER 310 (526)
Q Consensus 235 dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAFkVAfEr 310 (526)
.-|...-.. ...+-.+|++.+. +.+..+++...... . ..-++.|..|.-.+++.+++.
T Consensus 83 ~~ISFc~vd-------~d~k~FaFI~~~~-~~~f~CHVF~c~k~---------A-~~vs~aV~~Af~l~yQk~l~~ 140 (185)
T 2ysz_A 83 RFLSFMGVG-------KDVHTFAFIMDTG-NQRFECHVFWCEPN---------A-ANVSEAVQAACSGPSSGIEGR 140 (185)
T ss_dssp TTCCEEECC-------SSTTEEEEEEESS-SSCEEEEEEEESSC---------S-TTHHHHHHHHHHSCCCCCCCC
T ss_pred EEeeeeccC-------CCCcEEEEEecCC-CccEEEEEEEccCc---------h-HHHHHHHHHHHHHHHHHhhcc
Confidence 333333321 2246678988887 55644444443221 1 224778888888899988883
No 31
>3f0w_A NUMB-R, NUMB-like protein; PH domain-like, PID domain, phosphoprotein, signaling protei structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens} PDB: 1wj1_A 2nmb_A* 1ddm_A
Probab=94.26 E-value=0.013 Score=53.82 Aligned_cols=50 Identities=64% Similarity=1.072 Sum_probs=46.9
Q ss_pred CCCCCCccccchhhhcceeeEEEeeeeccccccCccceeeeecccCCCCcccccccchhcccceeeeeccccchhhHHHH
Q psy67 81 ESSKPHQWQSDEASVRAGTCYFHVKVCLGKVKQGEEHSVFMRFGYRPSGDVLHLSASAFKYLGCVEVYESRGMQVCEDAL 160 (526)
Q Consensus 81 ~~~~~~~w~~~~~~~~~~~c~f~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~ev~es~g~~~c~~a~ 160 (526)
++++|++|+.|++.++.|.|.|.|| |||+++|.++.|++.|.+|+
T Consensus 23 ~~~~p~~w~~~~e~l~~g~~~f~vk-----------------------------------YLGs~~V~~~~g~~~~~~Ai 67 (168)
T 3f0w_A 23 MASRPHQWQADEDAVRKGTCSFPVR-----------------------------------YLGHVEVEESRGMHVCEDAV 67 (168)
T ss_dssp HHCCCTTTHHHHHHHHTTCEEEEEE-----------------------------------EEEEEEESCSCCHHHHHHHH
T ss_pred cCCCCcCCcCCHHHHhCCceEEEEE-----------------------------------EeeEEEECCCCCHHHHHHHH
Confidence 6789999999999999999999999 99999999999999999999
Q ss_pred hhhee
Q psy67 161 KVVLI 165 (526)
Q Consensus 161 ~~l~~ 165 (526)
+.++.
T Consensus 68 ~~lk~ 72 (168)
T 3f0w_A 68 KKLKA 72 (168)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98864
No 32
>4dbb_A Amyloid beta A4 precursor protein-binding family 1; X11S/mints, PTB domain, chimera protein, protein transport; HET: IPA GOL; 1.90A {Rattus norvegicus}
Probab=94.04 E-value=0.061 Score=49.28 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=21.7
Q ss_pred ccceeeeeccc------cchhhHHHHhhhe
Q psy67 141 YLGCVEVYESR------GMQVCEDALKVVL 164 (526)
Q Consensus 141 ~~g~~ev~es~------g~~~c~~a~~~l~ 164 (526)
|||++||.+.+ +|++|.+|+++++
T Consensus 15 YLGs~eV~s~r~~~~~~r~~~~~eAi~ri~ 44 (162)
T 4dbb_A 15 YLGSTQLLSDKTPSKNVRMMQAQEAVSRIK 44 (162)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHTCC
T ss_pred EEeEEEEcCCCCCCcchhHHHHHHHHHHHH
Confidence 99999999777 6899999999986
No 33
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=91.94 E-value=0.52 Score=44.21 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=53.6
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAF 304 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAF 304 (526)
+..+.|-|+.+||.++|.++++++..++..+|.-+... .+.|-....+.... . |.+....|+.|+.-|+.=.
T Consensus 142 ~~~~~LgI~~~GI~v~~~~tk~~l~~~~~~~I~~~~~~---~~~f~I~~~~~~~~---~--~~~~T~q~~~I~~Li~~Yi 213 (222)
T 4f7g_A 142 LVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDG---Y--YSVQTTEGEQIAQLIAGYI 213 (222)
T ss_dssp EEEEEEEECSSEEEEECTTTCCEEEEEEGGGCCEEEEC---SSEEEEECCTTSSS---C--EEEECSCHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCcEEEEcCCCCceeEeccHHHeeeeccC---CCEEEEEECCccce---E--EEEECCcHHHHHHHHHHHH
Confidence 46899999999999999999999999998888666643 35676555543222 2 4444446999998877544
Q ss_pred HH
Q psy67 305 AA 306 (526)
Q Consensus 305 kV 306 (526)
..
T Consensus 214 ~~ 215 (222)
T 4f7g_A 214 DI 215 (222)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 34
>1wvh_A Tensin, tensin1; beta sandwich, cell adhesion; 1.50A {Gallus gallus} SCOP: b.55.1.2 PDB: 2gjy_A
Probab=91.50 E-value=0.097 Score=47.54 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=27.2
Q ss_pred EEEEEEeeeEEeeccCchhhHHhhhhceEe
Q psy67 167 MFALCYLGCVEVYESRGMQVCEDALKVLRY 196 (526)
Q Consensus 167 ~FaVkYLGsvEV~e~rg~qVV~eAIrqLKY 196 (526)
-+.|+|||++||....|+++|.+||+++.-
T Consensus 3 acnV~yLgSvevesltG~~av~~Ai~~~l~ 32 (134)
T 1wvh_A 3 ACNVLFINSVEMESLTGPQAISKAVAETLV 32 (134)
T ss_dssp EEEEEEEEEEEEETCCHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEEEecCCcCHHHHHHHHHHHHh
Confidence 478999999999999999999999997753
No 35
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=91.07 E-value=1 Score=44.57 Aligned_cols=69 Identities=13% Similarity=0.096 Sum_probs=51.6
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
..+.|-|+.+||.|+|.++++++..+++..|+ |.... +.+.|-....+.. .+++|... .|.+|+.-|..
T Consensus 242 ~~~~LgV~~~Gv~v~~~~tk~~l~~~~~~~is-w~~s~-~~~~f~i~~~~~~----~~~~~~t~--q~~~i~~li~~ 310 (322)
T 4dxa_B 242 IPVYVGVNIKGLHLLNMETKALLISLKYGCFM-WQLGD-TDTCFQIHSMENK----MSFIVHTK--QAGLVVKLLMK 310 (322)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEETTSEE-EEECS-STTEEEEEESSSC----CEEEEECT--THHHHHHHHHH
T ss_pred CeEEEEEccCceEEEcCCCceeeeccccceeE-EeecC-CCCEEEEEECCCC----ccEEEEeC--cHHHHHHHHHH
Confidence 58999999999999999999999999999999 66432 3456655444421 25666664 58888877654
No 36
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=90.06 E-value=1.2 Score=40.59 Aligned_cols=69 Identities=17% Similarity=0.264 Sum_probs=49.6
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVG 301 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIG 301 (526)
+..+.|-|+.+||.++|..++..+..++..+|.-+... .+.|.....+.... .|.+....|..|+.-|.
T Consensus 131 ~~~~~Lgi~~~Gi~~~~~~~~~~l~~~~~~~I~~~~~~---~~~f~i~~~~~~~~-----~~~~~t~~~~~i~~Li~ 199 (206)
T 1mix_A 131 LVPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDG-----YYSVQTTEGEQIAQLIA 199 (206)
T ss_dssp CEEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEC---SSEEEEECGGGSSS-----CEEEECSCHHHHHHHHH
T ss_pred cCcEEEEEcccceEEeCCCCCceeeeeehhHeeecccC---CCEEEEEeCcccce-----EEEEECCcHHHHHHHHH
Confidence 47899999999999999999999999998887766553 34565544443222 34454456888887654
No 37
>1aqc_A X11; PTB domain; 2.30A {Homo sapiens} SCOP: b.55.1.2 PDB: 1x11_A*
Probab=86.95 E-value=0.71 Score=42.66 Aligned_cols=24 Identities=21% Similarity=0.477 Sum_probs=21.2
Q ss_pred ccceeeeecccc------chhhHHHHhhhe
Q psy67 141 YLGCVEVYESRG------MQVCEDALKVVL 164 (526)
Q Consensus 141 ~~g~~ev~es~g------~~~c~~a~~~l~ 164 (526)
|||++||.+..| |++|.+|++.++
T Consensus 14 YLGs~eV~~~~g~~~~~R~~~~~eAi~rl~ 43 (172)
T 1aqc_A 14 YLGSTQLLSDKTPSKNVRMMQAQEAVSRIK 43 (172)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred eceEEEecCCCCCCcchhHHHHHHHHHHHH
Confidence 999999999888 467999999884
No 38
>3hqc_A Tensin-like C1 domain-containing phosphatase; TENC1, phosphotyrosine binding domain, PTB, TNS2, KIAA1075, struct genomics, PSI-2; 1.80A {Homo sapiens} SCOP: b.55.1.2 PDB: 2loz_A 2dkq_A
Probab=83.14 E-value=0.52 Score=43.89 Aligned_cols=30 Identities=23% Similarity=0.138 Sum_probs=28.0
Q ss_pred eEEEEEEEeeeEEeeccCchhhHHhhhhce
Q psy67 165 IYMFALCYLGCVEVYESRGMQVCEDALKVL 194 (526)
Q Consensus 165 ~~~FaVkYLGsvEV~e~rg~qVV~eAIrqL 194 (526)
+-.|.|.|||++||....|.++|..||..+
T Consensus 13 gaacnv~yLgSvevesltG~~av~kAv~~~ 42 (157)
T 3hqc_A 13 GAACSVLYLTSVETESLTGPQAVARASSAA 42 (157)
T ss_dssp CEEEEEEEEEEEECTTCCHHHHHHHHHHHH
T ss_pred CCeeeEEEeceEecCCCCChHHHHHHHHHH
Confidence 668999999999999999999999999866
No 39
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=82.61 E-value=4.3 Score=40.83 Aligned_cols=69 Identities=17% Similarity=0.261 Sum_probs=50.6
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
..+.|-|+.+||.++|.++++++..++..+|.-++.. .+.|.....+.... ...|.. ..|++|+.-|..
T Consensus 297 ~~~~LgI~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~---~~~f~I~~~~~~~~---~~~~~T--~~~~~I~~Li~~ 365 (371)
T 3ivf_A 297 VPRLLGITKECVMRVDEKTKEVIQEWSLTNIKRWAAS---PKSFTLDFGDYQDG---YYSVQT--TEGEQIAQLIAG 365 (371)
T ss_dssp EEEEEEECSSEEEEEETTTCCEEEEEEGGGCCEEEEE---TTEEEEECGGGSSS---CEEEEC--SCHHHHHHHHHH
T ss_pred ccEEEEEcCCcEEEEcCCCCceEEeeehhheeeeecC---CCEEEEEECCccCc---EEEEEC--ChHHHHHHHHHH
Confidence 4689999999999999999999999998888666554 35776666554322 234444 468888876653
No 40
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=81.05 E-value=6.7 Score=41.66 Aligned_cols=81 Identities=11% Similarity=0.074 Sum_probs=56.1
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAF 304 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAF 304 (526)
+..+.|-|+..||.++|.++++++..++..+|.-+..- ..+.|-.... + . ..+|.+ ..|..|+.-|..-+
T Consensus 465 ~~~l~LgV~~~GI~v~~~~~k~~l~~~~~~~I~~~~~~--~~~~f~i~~~-~---~--~l~f~T--~qa~~i~~LI~~Yi 534 (555)
T 3au4_A 465 PQELWLGVSADAVSVYKRGEGRPLEVFQYEHILSFGAP--LANTYKIVVD-E---R--ELLFET--SEVVDVAKLMKAYI 534 (555)
T ss_dssp CSEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEE--ETTEEEEEET-T---E--EEEEEC--TTHHHHHHHHHHHH
T ss_pred CceEEEEEcccceEEECCCCCeeEEEEEhhheeeecCC--CCCEEEEEEC-C---c--EEEEEC--CCHHHHHHHHHHHH
Confidence 36899999999999999999999999999998766531 1245543332 2 2 355665 46999998888777
Q ss_pred HHHHHHhhhhh
Q psy67 305 AACLERKQKRD 315 (526)
Q Consensus 305 kVAfErKqKRe 315 (526)
....+++..+.
T Consensus 535 ~~l~~~r~~~~ 545 (555)
T 3au4_A 535 SMIVKKRYSTT 545 (555)
T ss_dssp HHHHHHHCC--
T ss_pred HHHHHhhhccC
Confidence 66655443333
No 41
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=75.53 E-value=11 Score=41.43 Aligned_cols=71 Identities=15% Similarity=0.193 Sum_probs=52.0
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCC---ceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHE---KGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~---KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
..+.|-|+..||.|+|.+++.++ .++..+|+-++..+++. +.|.....+ -.+|+|.+. .|+.|+.-|..
T Consensus 493 ~~l~LgVn~~GV~v~d~~~k~ll-~f~~~eI~~is~~~~~~~~~~~ftl~~~~-----~~~~~F~T~--~a~~I~~LI~~ 564 (655)
T 3pvl_A 493 SDVIVAVNWTGVYFVDEQEQVLL-ELSFPEIMAVSSSRGTKMMAPSFTLATIK-----GDEYTFTSS--NAEDIRDLVVT 564 (655)
T ss_dssp SEEEEEEETTEEEEECTTCCEEE-EEEGGGEEEEEEECCCSSSCCEEEEEETT-----SCEEEEECT--THHHHHHHHHH
T ss_pred ccEEEEEcCCceEEEcCCCceEE-EechhHceEEeccCcccccccEEEEEecc-----CceEEEEcC--CHHHHHHHHHH
Confidence 47999999999999999998555 79998888887665432 456443222 236899986 48888877665
Q ss_pred HH
Q psy67 303 AF 304 (526)
Q Consensus 303 AF 304 (526)
-.
T Consensus 565 yi 566 (655)
T 3pvl_A 565 FL 566 (655)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 42
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=74.04 E-value=2.3 Score=43.47 Aligned_cols=24 Identities=29% Similarity=0.439 Sum_probs=20.7
Q ss_pred ccceeeeecccc-------chhhHHHHhhhee
Q psy67 141 YLGCVEVYESRG-------MQVCEDALKVVLI 165 (526)
Q Consensus 141 ~~g~~ev~es~g-------~~~c~~a~~~l~~ 165 (526)
|||+++|. |+. |++|.+|++++..
T Consensus 15 ylG~~~v~-s~~~~~~~~r~~~~~eai~rv~~ 45 (388)
T 3suz_A 15 YLGSTQLL-SERNPSKNIRMMQAQEAVSRVKR 45 (388)
T ss_dssp EEEEEEEE-ECSSCCHHHHHHHHHHHHHHHHH
T ss_pred Eeeeeecc-CCCCCCccchHHHHHHHHHHHHH
Confidence 99999997 443 8999999999976
No 43
>1j0w_A Downstream of tyrosine kinase 5; beta strands, ALFA helix, transferase; 2.50A {Homo sapiens} SCOP: b.55.1.2
Probab=73.24 E-value=45 Score=28.76 Aligned_cols=75 Identities=12% Similarity=0.039 Sum_probs=56.6
Q ss_pred cEEEEEEECCeEEEEECCCC-ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETK-GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAF 304 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTK-elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAF 304 (526)
-...|.|+.+.|.+.|..+. .++..-|+..|.=++.|. ..|+|-+...-..--=-+.|.|. .++.|...|..|.
T Consensus 21 G~~~L~l~~~~l~L~~~~~~~~~l~~Wp~~~LRRyG~~~---~~FsFEaGRrC~tG~G~f~F~~~--~~~~If~~v~~ai 95 (103)
T 1j0w_A 21 GECALQITYEYICLWDVQNPRVKLISWPLSALRRYGRDT---TWFTFEAGRMCETGEGLFIFQTR--DGEAIYQKVHSAA 95 (103)
T ss_dssp EEEEEEECSSEEEEEESSSTTBEEEEEEGGGEEEEEECS---SEEEEEECSSSSSCSEEEEEECS--CHHHHHHHHHHHH
T ss_pred ccEEEEECCCEEEEEecCCCCcceEEeeHHHHhhcCccC---CEEEEEeCCCCCCCCcEEEEEcC--CHHHHHHHHHHHH
Confidence 35789999999999999764 689999999999999876 59999877421110124678886 4889998886655
Q ss_pred H
Q psy67 305 A 305 (526)
Q Consensus 305 k 305 (526)
.
T Consensus 96 ~ 96 (103)
T 1j0w_A 96 L 96 (103)
T ss_dssp H
T ss_pred H
Confidence 3
No 44
>2v76_A Docking protein 1; alternative splicing, protein-binding, PTB domain, phosphorylation, adaptor protein; HET: PGE; 1.60A {Homo sapiens}
Probab=71.71 E-value=40 Score=29.27 Aligned_cols=74 Identities=15% Similarity=0.123 Sum_probs=54.2
Q ss_pred EEEEEEECCeEEEEEC----CCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 227 RAILYVSGDGLRVVDD----ETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 227 KV~L~VS~dGIrVVD~----kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
...|.|..+.|.+.+. ++++.+...|+..|.=++.|. ..|+|-+.-.-..--=-+.|.|. .+++|..+|..
T Consensus 24 ~y~L~v~~~~l~L~~~~~~~~~~~~~~~Wp~~~LRryG~d~---~~FsFEaGRrc~tG~G~f~F~~~--~~~~If~~l~~ 98 (107)
T 2v76_A 24 SYVLRVEAERLTLLTVGAQSQILEPLLSWPYTLLRRYGRDK---VMFSFEAGRRCPSGPGTFTFQTA--QGNDIFQAVET 98 (107)
T ss_dssp EEEEEECSSEEEEEEEC----CEEEEEEEEGGGEEEEEECS---SEEEEEECTTSTTCSEEEEEECS--CHHHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCccCCCCceeEEEEhHHhhhcCccC---CEEEEEecCCCCCCCcEEEEEeC--CHHHHHHHHHH
Confidence 6899999999999984 456788999999999999865 58999776321110113778886 48888877766
Q ss_pred HHH
Q psy67 303 AFA 305 (526)
Q Consensus 303 AFk 305 (526)
|.+
T Consensus 99 ~i~ 101 (107)
T 2v76_A 99 AIH 101 (107)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 45
>1p5t_A DOK1, docking protein 1; signaling protein; 2.35A {Mus musculus} SCOP: b.55.1.2 PDB: 1uef_A*
Probab=71.58 E-value=39 Score=30.28 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=53.7
Q ss_pred EEEEEEECCeEEEEECC----CCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHH
Q psy67 227 RAILYVSGDGLRVVDDE----TKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGC 302 (526)
Q Consensus 227 KV~L~VS~dGIrVVD~k----TKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQ 302 (526)
...|.|+.+.|.|.+.. +++.+...|+..|.=++.|. ..|+|-+.-.-..--=-+.|.|. .+++|..+|..
T Consensus 26 ~y~L~vt~~~l~L~~~~~~~~~~~~l~~Wp~~~LRryG~d~---~~FsFEaGRrC~tGeG~f~F~t~--~~~~If~~l~~ 100 (127)
T 1p5t_A 26 SYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDK---VMFSFEAGRRCPSGPGTFTFQTS--QGNDIFQAVEA 100 (127)
T ss_dssp EEEEEECSSEEEEEEECTTTCSEEEEEEEEGGGEEEEEECS---SEEEEEECTTSTTCSEEEEEECS--CHHHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCcccCCCcceEEEehHHhhhcCccC---CEEEEEecCCCCCCCcEEEEEeC--CHHHHHHHHHH
Confidence 68999999999999853 56688999999999999764 69999877321110123678886 48888766554
Q ss_pred HH
Q psy67 303 AF 304 (526)
Q Consensus 303 AF 304 (526)
+.
T Consensus 101 ~i 102 (127)
T 1p5t_A 101 AI 102 (127)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 46
>2dlw_A Docking protein 2, isoform A; IRS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.86 E-value=21 Score=31.35 Aligned_cols=73 Identities=15% Similarity=0.068 Sum_probs=55.8
Q ss_pred EEEEEEECCeEEE-EECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHHHHH
Q psy67 227 RAILYVSGDGLRV-VDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVGCAF 304 (526)
Q Consensus 227 KV~L~VS~dGIrV-VD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIGQAF 304 (526)
...|.|..+.|.| .+..++..+..-|+..|.=++.|. ..|.|-+.-.-..--=-+.|.|. .|++|-.+|..|.
T Consensus 29 ~y~L~l~~~~l~L~~~~~~~~~l~~Wpl~~LRryG~d~---~~FsfEaGRrC~tGeG~f~F~t~--~~~~if~~l~~~i 102 (113)
T 2dlw_A 29 SYTLRAGESALELWGGPEPGTQLYDWPYRFLRRFGRDK---VTFSFEAGRRCVSGEGNFEFETR--QGNEIFLALEEAI 102 (113)
T ss_dssp EEEEEECSSBEECCCSSSSCCCSSCCBGGGCCCEEEET---TEEEEEECSSCSSCSEEEEECCS--THHHHHHHHHHHH
T ss_pred cEEEEEcCCEEEEEecCCCCCceEEEEhHHhhhcCccC---CEEEEEecCCCCCCCCEEEEEcC--CHHHHHHHHHHHH
Confidence 8999999999999 788999999999999999998875 59999776321100013678885 4888887766644
No 47
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=60.33 E-value=81 Score=30.16 Aligned_cols=69 Identities=14% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCcEEEEEEECCeEEEEECCCC-ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHH
Q psy67 224 RPVRAILYVSGDGLRVVDDETK-GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKES-GERLSH 298 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTK-elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~ 298 (526)
+...+.|-|+..||.|.|..++ ..+..++...|.=++..+ +.|.....+... ..++|.+.... |+.|..
T Consensus 209 ~g~~~~Lgv~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~---~~f~i~~~~~~~---~~~~f~~~~~~~~k~l~~ 279 (294)
T 1ef1_A 209 KGSELWLGVDALGLNIYEQNDRLTPKIGFPWSEIRNISFND---KKFVIKPIDKKA---PDFVFYAPRLRINKRILA 279 (294)
T ss_dssp TCCEEEEEEETTEEEEEETTCSSSCSEEEEGGGEEEEEEET---TEEEEEESSSSS---CCEEEECSSHHHHHHHHH
T ss_pred CCCEEEEEEecCcEEEEeCCCccccceEEEcccceEeeecC---CEEEEEEccCcc---ceEEEEeCCHHHHHHHHH
Confidence 4589999999999999999998 566778777776655543 567666555322 24789987642 555543
No 48
>3voq_A Target of rapamycin complex 2 subunit mapkap1; PH domain, membrane protein; 2.00A {Homo sapiens}
Probab=58.03 E-value=59 Score=29.27 Aligned_cols=77 Identities=10% Similarity=0.087 Sum_probs=57.4
Q ss_pred cEEEEEEECCeEEEEECCCC---------ceeeeeecceeEEEeeCCCCC---ceEEEEEecCCcCeeeEEEEEecCccH
Q psy67 226 VRAILYVSGDGLRVVDDETK---------GLMVDQTIEKVSFCAPDRNHE---KGFSYICRDGTTRRWMCHGFLALKESG 293 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTK---------elL~s~pI~rISFCA~D~~d~---KvFAFIARd~st~rf~CHVF~C~K~kA 293 (526)
.++.|-|+.+-|.|.-..++ .--.++++..|--|-....++ ..|-.+.-. ...+.=|=|.++...|
T Consensus 30 te~~L~IdGd~ihI~P~~~~k~~~kf~~~~K~ts~~~~~Vv~Ckvs~~~p~s~~~Fklv~~~--~~~~KryDFEa~~~~A 107 (125)
T 3voq_A 30 TDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSDLLCACDLAEEKSPSHAIFKLTYLS--NHDYKHLYFESDAATV 107 (125)
T ss_dssp EEEEEEECSSEEEEEECC------CSBCCCCCEEEEGGGEEEEEEEEECSSSCEEEEEEEEE--TTEEEEEEEEECHHHH
T ss_pred eeEEEEecCcEEEEeeccCCccccccccCCcceEEeecceEEEEeeccCCCCcceEEEEEeC--CCCcccceeEcCcccH
Confidence 78999999999999887554 234578999999999766555 788766643 2456678899987568
Q ss_pred HHHHHHHHHHH
Q psy67 294 ERLSHAVGCAF 304 (526)
Q Consensus 294 q~Ia~AIGQAF 304 (526)
++|..-|..-.
T Consensus 108 ~EIV~kin~IL 118 (125)
T 3voq_A 108 NEIVLKVNYIL 118 (125)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhhe
Confidence 88987776543
No 49
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=54.87 E-value=80 Score=30.62 Aligned_cols=69 Identities=16% Similarity=0.127 Sum_probs=47.5
Q ss_pred CCcEEEEEEECCeEEEEECCCCc-eeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCc-cHHHHHH
Q psy67 224 RPVRAILYVSGDGLRVVDDETKG-LMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKE-SGERLSH 298 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTKe-lL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~-kAq~Ia~ 298 (526)
+...+.|-|+.+||.|+|..++. ++..++..+|.-++... +.|-....+.... .++|.+... .|+.|..
T Consensus 229 ~g~~~~LgI~~~Gi~v~~~~~k~~~~~~f~w~~I~~~~~~~---~~f~i~~~~~~~~---~~~f~~~~~~~~k~i~~ 299 (314)
T 1h4r_A 229 KGTELLLGVDALGLHIYDPENRLTPKISFPWNEIRNISYSD---KEFTIKPLDKKID---VFKFNSSKLRVNKLILQ 299 (314)
T ss_dssp TCCEEEEEECSSEEEEECTTCSSSCSEEEEGGGEEEEEEET---TEEEEEESSTTSC---CEEEECCCHHHHHHHHH
T ss_pred CCCEEEEEEeCCceEEEeCCCCcccceEEecccceEEEeeC---CEEEEEEcCCCCc---eEEEEcCCHHHHHHHHH
Confidence 45789999999999999999986 56778776665555432 4676666654322 478888653 2555553
No 50
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=48.23 E-value=1.1e+02 Score=33.19 Aligned_cols=68 Identities=15% Similarity=0.127 Sum_probs=47.1
Q ss_pred CCcEEEEEEECCeEEEEECCCC-ceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHH
Q psy67 224 RPVRAILYVSGDGLRVVDDETK-GLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKES-GERLS 297 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTK-elL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia 297 (526)
....+.|-|+..||.|++..++ .++..|+...|.-++... +.|-....+... ..++|.+.... |..|.
T Consensus 212 ~g~~l~LGV~~~GI~v~~~~~k~~~l~~f~w~~I~~isf~~---k~F~I~~~~~~~---~~l~F~t~~~~~ak~i~ 281 (575)
T 2i1j_A 212 KNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFND---RKFIIKPIDKKA---PDFVFFAPRVRVNKRIL 281 (575)
T ss_dssp TCCEEEEEECSSEEEEEETTCSSSCSEEEEGGGEEEEEEET---TEEEEEESCTTS---CCEEEECSCHHHHHHHH
T ss_pred CCCEEEEEEcCCeeEEEeCCCCcccceEecHHHhhcccCCC---CeEEEEEccCCc---ceeEEEeCCchhHHHHH
Confidence 4578999999999999999987 456778877776555443 567666554322 24789887642 45543
No 51
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=47.99 E-value=1.5e+02 Score=26.46 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=57.8
Q ss_pred EEEEEEECCeEEEEECCCCc------eeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCcc-HHHHHHH
Q psy67 227 RAILYVSGDGLRVVDDETKG------LMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKES-GERLSHA 299 (526)
Q Consensus 227 KV~L~VS~dGIrVVD~kTKe------lL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~k-Aq~Ia~A 299 (526)
+-.|.|..+=|.|+-.+++. -..++.|.+|--|-+.+.++..|-.|...+......=+=|...... |.+|...
T Consensus 29 ER~L~IDGdYIHImP~~~~~~~~~~~KTtS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ 108 (121)
T 3ulb_A 29 ERTLAIDGDYIYIVPPEGRIHWHDNVKTKSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTR 108 (121)
T ss_dssp EEEEEEETTEEEEECCC-------CCCCEEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHH
T ss_pred cEEEEEcCceEEEecCCCCcccccCCcEEEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHH
Confidence 45688899999999776553 2346889999999999999999988876533333456789998763 8888888
Q ss_pred HHHHHH
Q psy67 300 VGCAFA 305 (526)
Q Consensus 300 IGQAFk 305 (526)
|....+
T Consensus 109 ik~~~~ 114 (121)
T 3ulb_A 109 LQNLLS 114 (121)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776553
No 52
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=43.56 E-value=1.2e+02 Score=29.29 Aligned_cols=77 Identities=8% Similarity=-0.001 Sum_probs=54.1
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCC-cCeeeEEEEEecCccHHHHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGT-TRRWMCHGFLALKESGERLSHAVGCAF 304 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~s-t~rf~CHVF~C~K~kAq~Ia~AIGQAF 304 (526)
-.-.|.+..+.|.+++..++..+..-|+..|..|+.+. ..|.|=+.-.- +.. ==+.|.++. +.|++.|..|+
T Consensus 178 G~y~l~l~~~~l~L~~~~~~~~~~~wpl~~lRr~G~~~---~~F~fEaGR~c~~G~-G~f~f~t~~---~~i~~~i~~~i 250 (264)
T 1qqg_A 178 GIYRLCLTSKTISFVKLNSEAAAVVLQLMNIRRCGHSE---NFFFIEVGRSAVTGP-GEFWMQVDD---SVVAQNMHETI 250 (264)
T ss_dssp EEEEEEECSSEEEEEETTCSSCSEEEEGGGEEEEEEET---TEEEEEECTTSTTCS-EEEEEECSC---HHHHHHHHHHH
T ss_pred CceEEEEeCcEEEEEecCCCcceEEeehhheecccccC---cEEEEEecCCCCCCC-cEEEEecCc---HHHHHHHHHHH
Confidence 46778899999999999999999999999999999873 47777666321 111 114566653 35666666666
Q ss_pred HHHHH
Q psy67 305 AACLE 309 (526)
Q Consensus 305 kVAfE 309 (526)
..|..
T Consensus 251 ~~~~~ 255 (264)
T 1qqg_A 251 LEAMR 255 (264)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 53
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=38.66 E-value=2.2e+02 Score=27.83 Aligned_cols=70 Identities=17% Similarity=0.087 Sum_probs=52.6
Q ss_pred CcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHH
Q psy67 225 PVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHA 299 (526)
Q Consensus 225 ~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~A 299 (526)
.-.+.|.|....+.|.+.....++..-+|..+.-.+.+.+ .|.|-+...-..-==-|+|.+. .+++|.+.
T Consensus 130 sG~a~Lhl~~~~l~L~~~~~~~~l~~W~L~~LRRYG~~~~---~F~FE~grrC~~geG~f~f~t~--qge~I~~l 199 (224)
T 3ml4_A 130 SGPATLHLCNDILVLARDIPPTVMGQWKLSDLRRYGAVPN---GFIFEGGTRCGYWAGVFFLSSA--EGEQMSFL 199 (224)
T ss_dssp CEEEEEEEETTEEEEEETTTTEEEEEEEGGGEEEEEEETT---EEEEEECGGGGGGCEEEEEECS--CHHHHHHH
T ss_pred CCcEEEEecCCcEEEccCCCccEEEEcchHHhhhhcccCC---EeEEecCCcCCCCCCEEEEecC--cHHHHHHH
Confidence 4578999999999999999999999999999887776553 8888776311111124889985 58888843
No 54
>2kuq_A Fibroblast growth factor receptor substrate 3, LI residue peptide from ALK tyrosine...; chimera, SNT-2, PTB domain, HALK, structural genomics; NMR {Homo sapiens} PDB: 2yt2_A
Probab=29.31 E-value=3.5e+02 Score=25.06 Aligned_cols=69 Identities=10% Similarity=0.006 Sum_probs=49.5
Q ss_pred cEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCcCeeeEEEEEecCccHHHHHHHHH
Q psy67 226 VRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTTRRWMCHGFLALKESGERLSHAVG 301 (526)
Q Consensus 226 qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st~rf~CHVF~C~K~kAq~Ia~AIG 301 (526)
-...|.|+...|.+.+..++ +..-|+..|.=++.|. ..|.|-+.-.-..--=-+.|.|. .|++|...|.
T Consensus 34 G~~~L~lt~~~L~L~~~~~~--~~~WPy~~LRRYG~d~---~~FsFEaGRRC~tGeGiF~F~t~--~~e~If~~l~ 102 (153)
T 2kuq_A 34 GSGVMELTQSELVLHLHRRE--AVRWPYLCLRRYGYDS---NLFSFESGRRCQTGQGIFAFKCS--RAEEIFNLLQ 102 (153)
T ss_dssp EEEEEEECSSCEEEECSSSC--CEEECGGGEEEEEEET---TEEEEEECTTSTTCSEEEEEECT--THHHHHHHHH
T ss_pred eeEEEEEcCCEEEEEeCCCC--ceEccHHHhhhcCccC---CEEEEECCCCCCCCCcEEEEEcC--CHHHHHHHHH
Confidence 46889999999999988764 4578999998888776 49999887421100124678886 4888875544
No 55
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=27.27 E-value=2e+02 Score=27.95 Aligned_cols=63 Identities=25% Similarity=0.184 Sum_probs=42.3
Q ss_pred CCcEEEEEEECCeEEEEECCCCceeeeeecceeEEEeeCCCCCceEEEEEecCCc-CeeeEEEEEecCc
Q psy67 224 RPVRAILYVSGDGLRVVDDETKGLMVDQTIEKVSFCAPDRNHEKGFSYICRDGTT-RRWMCHGFLALKE 291 (526)
Q Consensus 224 K~qKV~L~VS~dGIrVVD~kTKelL~s~pI~rISFCA~D~~d~KvFAFIARd~st-~rf~CHVF~C~K~ 291 (526)
....+.|-|+..||.|.|..++ +..++..+|.-++..+ +.|-...+.... ..-..++|.+++.
T Consensus 215 ~~~~~~LgV~~~Gi~v~~~~~k--l~~f~w~~I~~~s~~~---k~F~i~~~~~~~~~~~~~~~f~~~~~ 278 (296)
T 3qij_A 215 EGVDIILGVCSSGLLVYKDKLR--INRFPWPKVLKISYKR---SSFFIKIRPGEQEQYESTIGFKLPSY 278 (296)
T ss_dssp TSCEEEEEECSSEEEEEETTEE--EEEEEGGGEEEEEEET---TEEEEEEC-------CEEEEEECSSH
T ss_pred CCCEEEEEECCCeEEEEeCCCe--EEEEEhhhcCEEEecC---CEEEEEEecCccCCccceEEEECCCH
Confidence 4578999999999999999875 6788877777766543 456544443221 1224678998765
No 56
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=20.32 E-value=1.8e+02 Score=25.52 Aligned_cols=48 Identities=8% Similarity=0.113 Sum_probs=32.8
Q ss_pred ChHHHHHHHHHHHh-cCCCCcEEEEEEEC----CeEEEEECCCCceeeeeecc
Q psy67 207 GMQVCEDALKVLRN-SRRRPVRAILYVSG----DGLRVVDDETKGLMVDQTIE 254 (526)
Q Consensus 207 G~qV~eeAVkrIKa-sgKK~qKV~L~VS~----dGIrVVD~kTKelL~s~pI~ 254 (526)
..+..++|+.+|.. .....+.+.+.|.. --|+|+|.+|+++|...|-.
T Consensus 36 ~~eel~~av~~lN~~~~~~n~~L~F~vdee~~~~vVkVvD~~TgEVIRqIPpE 88 (117)
T 2hc5_A 36 SYTNLAEMVGEMNKLLEPSQVHLKFELHDKLNEYYVKVIEDSTNEVIREIPPK 88 (117)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCCEEEEEEEETTEEEEEEEETTTTEEEEEECHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCceEEEEecCCCcEEEEEEECCCCcEEEeCChH
Confidence 45667888888842 22234556666643 23899999999999888743
Done!