Query psy6704
Match_columns 332
No_of_seqs 104 out of 121
Neff 5.1
Searched_HMMs 13730
Date Sat Aug 17 00:55:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6704.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6704hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c4ba2 g.3.2.1 (A:117-144) Tr 48.0 2.7 0.0002 24.4 0.8 11 293-303 14-24 (28)
2 d1mcvi_ g.3.2.1 (I:) Trypsin i 44.6 2.5 0.00018 24.7 0.3 10 294-303 16-25 (28)
3 d2fh1a2 d.109.1.1 (A:533-628) 35.0 11 0.00081 27.4 2.7 43 225-271 2-45 (96)
4 d1m56d_ f.23.8.1 (D:) Bacteria 33.3 8.7 0.00064 24.7 1.6 25 54-78 17-41 (42)
5 d1kshb_ b.1.18.8 (B:) GMP-PDE 33.3 34 0.0025 27.3 5.7 20 170-189 16-35 (149)
6 d1qled_ f.23.8.1 (D:) Bacteria 32.3 7.3 0.00053 25.2 1.1 25 54-78 18-42 (43)
7 d2q4ma1 d.23.1.2 (A:24-212) Hy 32.0 13 0.00094 30.0 2.9 37 148-189 34-70 (189)
8 d1ha9a_ g.3.2.1 (A:) Trypsin i 28.9 6.3 0.00046 23.9 0.3 9 295-303 23-31 (34)
9 d2azeb1 e.63.1.2 (B:201-301) T 19.3 20 0.0015 26.7 1.6 35 226-262 60-94 (101)
10 d1h9ii_ g.3.2.1 (I:) Trypsin i 18.3 18 0.0013 21.1 0.8 10 294-303 16-25 (30)
No 1
>d2c4ba2 g.3.2.1 (A:117-144) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=47.98 E-value=2.7 Score=24.43 Aligned_cols=11 Identities=45% Similarity=1.065 Sum_probs=8.2
Q ss_pred ceEEeEecCCC
Q psy6704 293 AFKLCVCMPGG 303 (332)
Q Consensus 293 ~yklCvC~p~G 303 (332)
-..-|||.|+|
T Consensus 14 clagcvcgpng 24 (28)
T d2c4ba2 14 CLAGCVCGPNG 24 (28)
T ss_dssp SCTTCEECTTS
T ss_pred ccccceecCCC
Confidence 34459999887
No 2
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=44.58 E-value=2.5 Score=24.67 Aligned_cols=10 Identities=50% Similarity=1.155 Sum_probs=7.5
Q ss_pred eEEeEecCCC
Q psy6704 294 FKLCVCMPGG 303 (332)
Q Consensus 294 yklCvC~p~G 303 (332)
..-|||.|||
T Consensus 16 lagcvcgpng 25 (28)
T d1mcvi_ 16 LAGCVCGPNG 25 (28)
T ss_dssp CTTCCBCTTS
T ss_pred cccceecCCC
Confidence 3459999887
No 3
>d2fh1a2 d.109.1.1 (A:533-628) Gelsolin {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.04 E-value=11 Score=27.38 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=28.8
Q ss_pred ecce-EEEEcCceeEEEeceEEEEeecceEEEecCceEEEecCCceEE
Q psy6704 225 SETY-TRLKGNEGISMEGRTITWTADKDIFLKSVNGSLTLAAENGIFL 271 (332)
Q Consensus 225 S~tr-L~~~g~eGV~i~a~~i~~~a~~dI~L~S~~G~i~Lda~~gI~i 271 (332)
+.+| ..++|.....+.+..+.+++. .|+|.+ .-+||+++.||+
T Consensus 2 ~~~RLf~v~g~~~~~~~~~EV~~~~s---sLns~d-~fILd~~~~iyv 45 (96)
T d2fh1a2 2 ASTRLFQVRANSAGATRAVEVLPKAG---ALNSND-AFVLKTPSAAYL 45 (96)
T ss_dssp CSSEEEEEEECTTCCEEEEEECCSGG---GCBTTS-EEEEECSSCEEE
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCHH---HhCCCC-eEEEECCCEEEE
Confidence 4678 788888776655444443332 277766 778888888887
No 4
>d1m56d_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=33.34 E-value=8.7 Score=24.73 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=18.6
Q ss_pred ceeecchhhHHHHHHHHHHHHHHHH
Q psy6704 54 TGLHDGKSFTFWALIGLLYLFALIN 78 (332)
Q Consensus 54 ~Gi~GwRk~cly~~vllL~il~viN 78 (332)
-|.--|-+|..+.+|.+|..|++.|
T Consensus 17 ~gFik~~t~~~i~~i~~liflAi~n 41 (42)
T d1m56d_ 17 AGFVRMVTWAAVVIVAALIFLALAN 41 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3555677777788888888888877
No 5
>d1kshb_ b.1.18.8 (B:) GMP-PDE delta {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.26 E-value=34 Score=27.32 Aligned_cols=20 Identities=10% Similarity=0.053 Sum_probs=17.2
Q ss_pred eeeEEEeCCCCCceeEEecC
Q psy6704 170 VKEFNVYDPTDHLPIFSTGF 189 (332)
Q Consensus 170 ~~~F~V~d~~~g~~lFsad~ 189 (332)
.+.|.++|..+|+.||-...
T Consensus 16 ~~~~~iRD~etG~Vlfe~~~ 35 (149)
T d1kshb_ 16 LNWMNLRDAETGKILWQGTE 35 (149)
T ss_dssp EEEEEEEETTTTEEEEEECS
T ss_pred EEEEEEEeCCCCeEEEEecC
Confidence 47799999999999997554
No 6
>d1qled_ f.23.8.1 (D:) Bacterial aa3 type cytochrome c oxidase subunit IV {Paracoccus denitrificans [TaxId: 266]}
Probab=32.27 E-value=7.3 Score=25.24 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=18.6
Q ss_pred ceeecchhhHHHHHHHHHHHHHHHH
Q psy6704 54 TGLHDGKSFTFWALIGLLYLFALIN 78 (332)
Q Consensus 54 ~Gi~GwRk~cly~~vllL~il~viN 78 (332)
-|.--|-.|..+.+|.+|+.|++.|
T Consensus 18 ~gFi~~~t~~~i~~i~~liflAi~n 42 (43)
T d1qled_ 18 AGFIKGATWVSILSIAVLVFLALAN 42 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556677777788888888888876
No 7
>d2q4ma1 d.23.1.2 (A:24-212) Hypothetical protein At5g01750 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=32.03 E-value=13 Score=30.03 Aligned_cols=37 Identities=5% Similarity=-0.008 Sum_probs=21.6
Q ss_pred ecCCCceeeeEEEcCCceEEEeeeeEEEeCCCCCceeEEecC
Q psy6704 148 NFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGF 189 (332)
Q Consensus 148 ~~~~g~~~~~L~v~~~~~~~~~~~~F~V~d~~~g~~lFsad~ 189 (332)
.|.+|+. -..|....... -..+.++|+ +|++||+-.+
T Consensus 34 ~D~~G~~--vf~V~g~~~~~--~~~~~l~D~-~G~~L~~i~~ 70 (189)
T d2q4ma1 34 TDVNGNL--LFKVKEPVFGL--HDKRVLLDG-SGTPVVTLRE 70 (189)
T ss_dssp EETTSCE--EEEEECSBTTB--TTEEEEECT-TSCEEEEEEC
T ss_pred EeCCCCE--EEEEecccCCC--CCeEEEECC-CCCEEEEEEe
Confidence 4666664 44454433221 255677777 6777777765
No 8
>d1ha9a_ g.3.2.1 (A:) Trypsin inhibitor {Spiny bitter cucumber (Momordica cochinchinensis), MCOTI-II [TaxId: 3674]}
Probab=28.86 E-value=6.3 Score=23.94 Aligned_cols=9 Identities=33% Similarity=1.018 Sum_probs=7.0
Q ss_pred EEeEecCCC
Q psy6704 295 KLCVCMPGG 303 (332)
Q Consensus 295 klCvC~p~G 303 (332)
--|+|+|+|
T Consensus 23 ~~cic~~~g 31 (34)
T d1ha9a_ 23 GACICRGNG 31 (34)
T ss_dssp TTCCBCTTS
T ss_pred ccceecCCC
Confidence 359999887
No 9
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.32 E-value=20 Score=26.74 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=23.9
Q ss_pred cceEEEEcCceeEEEeceEEEEeecceEEEecCceEE
Q psy6704 226 ETYTRLKGNEGISMEGRTITWTADKDIFLKSVNGSLT 262 (332)
Q Consensus 226 ~trL~~~g~eGV~i~a~~i~~~a~~dI~L~S~~G~i~ 262 (332)
.|-+.++||.|..++-..=+ -.--|+|+|++|.|-
T Consensus 60 ~tviaIkAP~gT~LeVPdp~--~~yqi~lkS~~GpI~ 94 (101)
T d2azeb1 60 QMVMVIKAPPETQLQAVDSS--ENFQISLKSKQGPID 94 (101)
T ss_dssp EEEEEEECCTTCEEEEEECS--SCEEEEEECSSSCCE
T ss_pred ceEEEEECCCCCEEeecCCC--ccEEEEEecCCCCEE
Confidence 34488899999888764211 012588999998875
No 10
>d1h9ii_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=18.31 E-value=18 Score=21.14 Aligned_cols=10 Identities=30% Similarity=0.713 Sum_probs=6.7
Q ss_pred eEEeEecCCC
Q psy6704 294 FKLCVCMPGG 303 (332)
Q Consensus 294 yklCvC~p~G 303 (332)
..-|||.|+|
T Consensus 16 lagcvc~~n~ 25 (30)
T d1h9ii_ 16 LAGCVCTNNK 25 (30)
T ss_dssp CTTCEECTTS
T ss_pred cceeEecCCC
Confidence 4459997654
Done!