Your job contains 1 sequence.
>psy6704
MESDIDVVGDEVKINKLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGK
SFTFWALIGLLYLFALINLVLTLTLMTMLRIGWGMETIEMLPLLNMVKLYGDIDLGKLYK
DDGYFSSFKDSGLRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTD
HLPIFSTGFRSADFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISME
GRTITWTADKDIFLKSVNGSLTLAAENGIFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCM
PGGRIFRVKADDIMSHNACHNINTSPEHHPCR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6704
(332 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0038042 - symbol:Scgbeta "Sarcoglycan beta" specie... 367 9.5e-34 1
ZFIN|ZDB-GENE-030131-6695 - symbol:sgcb "sarcoglycan, bet... 266 4.8e-23 1
MGI|MGI:1346523 - symbol:Sgcb "sarcoglycan, beta (dystrop... 261 1.6e-22 1
RGD|1594202 - symbol:Sgcb "sarcoglycan, beta (dystrophin-... 255 7.0e-22 1
UNIPROTKB|F1NLD5 - symbol:SGCB "Uncharacterized protein" ... 250 2.4e-21 1
UNIPROTKB|F1P4K5 - symbol:SGCB "Uncharacterized protein" ... 250 2.4e-21 1
UNIPROTKB|Q16585 - symbol:SGCB "Beta-sarcoglycan" species... 244 1.0e-20 1
UNIPROTKB|F1SE70 - symbol:SGCB "Uncharacterized protein" ... 240 2.7e-20 1
UNIPROTKB|F1PA70 - symbol:SGCB "Uncharacterized protein" ... 239 3.5e-20 1
UNIPROTKB|A6QP70 - symbol:SGCB "Beta-sarcoglycan" species... 235 9.2e-20 1
UNIPROTKB|J9P0F1 - symbol:SGCB "Uncharacterized protein" ... 232 1.9e-19 1
UNIPROTKB|B7Z635 - symbol:SGCB "cDNA FLJ57888, highly sim... 183 6.5e-14 1
>FB|FBgn0038042 [details] [associations]
symbol:Scgbeta "Sarcoglycan beta" species:7227 "Drosophila
melanogaster" [GO:0008307 "structural constituent of muscle"
evidence=ISS] [GO:0016012 "sarcoglycan complex" evidence=ISS;NAS]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR006875
Pfam:PF04790 EMBL:AE014297 GO:GO:0016021 GO:GO:0007010
GO:GO:0016012 GeneTree:ENSGT00390000008110 KO:K12566
FlyBase:FBgn0038042 EMBL:AY071368 RefSeq:NP_524327.1
UniGene:Dm.2438 STRING:Q9VG77 EnsemblMetazoa:FBtr0082596
GeneID:41525 KEGG:dme:Dmel_CG5657 UCSC:CG5657-RA CTD:41525
InParanoid:Q9VG77 OMA:KICVCMP GenomeRNAi:41525 NextBio:824252
Uniprot:Q9VG77
Length = 352
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 86/273 (31%), Positives = 140/273 (51%)
Query: 53 HTGLHDGKS-FTFWALIGLLYLFALINXXXXXXXXXXXRIGWGMETIEMLPLLNMVKLYG 111
H G H G++ F FW ++ LL + + N R+G G++ +E++P +++VK YG
Sbjct: 68 HPG-HQGRNTFAFWTIVVLLLVLTVGNLLLTLTIVGVLRLGKGVQGMEVIPEVDLVKFYG 126
Query: 112 DIDLGKLYKDD-GYFSSFKDSGLRITGRQG---GSVHIDV---NFGVNRTRRMLSIEPEG 164
DL ++ + G F D + I+ G G VH+ V G R + + EG
Sbjct: 127 TTDLERVQTNSIGQIHGFSDVPVTISSDAGDGEGGVHVRVFRNGNGAASERDRIVLNREG 186
Query: 165 VRVTNVKEFNVYDPTDHLPIFSTGFRSADFGLPRGVKKLDVQQVRTSRIISPIEDDLTLR 224
+ V F V DP D PIF+T + +P GV+ L + V S I+SPI++ L L
Sbjct: 187 ILVQATNLFEVKDPVDKQPIFTT--HRPQYNIPGGVEALQAKVVSASGIVSPIDESLVLE 244
Query: 225 SETYTRLKGNEGISMEGRTITWTADKDIFLKSVNGSLTLAAENGIFLEVKKLPFVKKNLF 284
S+ ++G+EG+ +G ++ A+ I + S G+ L A GIFL++ ++P V L
Sbjct: 245 SDGRMAIRGSEGVYFDGASVDMQAEHHILINSTQGATILEAGTGIFLDMDRIPIVSSELG 304
Query: 285 LDSNLHNAAFKLCVCMPGGRIFRVKADDIMSHN 317
L + + +K+CVCMP G +FR+ + HN
Sbjct: 305 LRTG--SVQYKICVCMPHGTLFRIAIPRV--HN 333
>ZFIN|ZDB-GENE-030131-6695 [details] [associations]
symbol:sgcb "sarcoglycan, beta
(dystrophin-associated glycoprotein)" species:7955 "Danio rerio"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0016012 "sarcoglycan
complex" evidence=IEA] [GO:0042383 "sarcolemma" evidence=IDA]
[GO:0016010 "dystrophin-associated glycoprotein complex"
evidence=NAS] InterPro:IPR006875 Pfam:PF04790
ZFIN:ZDB-GENE-030131-6695 GO:GO:0016021 GO:GO:0007010 GO:GO:0042383
GO:GO:0016010 GO:GO:0016012 CTD:6443 eggNOG:NOG84633
GeneTree:ENSGT00390000008110 HOGENOM:HOG000133159
HOVERGEN:HBG004508 KO:K12566 OMA:NMGCQTS OrthoDB:EOG4GTKDD
EMBL:CT583700 EMBL:BC103486 IPI:IPI00508099 RefSeq:NP_001030145.1
UniGene:Dr.19595 STRING:Q3ZB93 Ensembl:ENSDART00000074172
GeneID:559788 KEGG:dre:559788 InParanoid:Q3ZB93 NextBio:20883135
Uniprot:Q3ZB93
Length = 313
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 91/300 (30%), Positives = 147/300 (49%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRV-IEDPGGSPSHTGLHDGKSFTFWALIGLLYLF 74
K S+R+K + +R+ N+ H+ NF+AG V IE+ TGL K +I LL+L
Sbjct: 13 KKSMREKAIERRSANK-EHNSNFKAGYVPIEEE--RLHKTGLRGRKGIFAIGIIILLFLL 69
Query: 75 ALINXXXXXXXXXXXRIG-WGMETIEMLPLLNMVKLYGDIDLGKLYK-DDGYFSSFKDSG 132
ALIN RIG G E++E +++ D+G ++ KD
Sbjct: 70 ALINLIITLVIWTVIRIGPGGCESMEFHES-GLLRFKQKADMGIVHPLHKSTVGGRKDQD 128
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E + + + + DP FST F +
Sbjct: 129 LVITGNNNPVV-----FRQGNTK--LSVEEDKTSIVSDLGISFTDPRTQNTFFSTDFDTH 181
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP+ VK L+V++ T RI S DLT++ + ++GNEG+ + G+T+ ++ I
Sbjct: 182 EFHLPKEVKVLNVKKASTERITSNASSDLTIKGDGKAIIRGNEGVYIMGKTVEFSMGGGI 241
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLP--FVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVK 309
LK+ N S+ L NG + + ++P + +L+ + L +KLC+C G +FRV+
Sbjct: 242 ELKAEN-SIIL---NGSVMISPSRIPNSSLGGDLYFNDGLER--YKLCMCADG-TLFRVQ 294
>MGI|MGI:1346523 [details] [associations]
symbol:Sgcb "sarcoglycan, beta (dystrophin-associated
glycoprotein)" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0016010 "dystrophin-associated glycoprotein
complex" evidence=ISO] [GO:0016012 "sarcoglycan complex"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0035051 "cardiocyte
differentiation" evidence=IMP] InterPro:IPR006875 Pfam:PF04790
MGI:MGI:1346523 GO:GO:0005737 GO:GO:0007010 GO:GO:0005887
GO:GO:0005856 GO:GO:0042383 GO:GO:0016044 GO:GO:0035051
GO:GO:0016012 CTD:6443 eggNOG:NOG84633 GeneTree:ENSGT00390000008110
HOGENOM:HOG000133159 HOVERGEN:HBG004508 KO:K12566 OMA:NMGCQTS
EMBL:AF169288 EMBL:AB024921 EMBL:AK014381 EMBL:AK132306
EMBL:AK169403 EMBL:BC052349 IPI:IPI00124836 RefSeq:NP_036020.1
UniGene:Mm.89310 ProteinModelPortal:P82349 STRING:P82349
PhosphoSite:P82349 PaxDb:P82349 PRIDE:P82349
Ensembl:ENSMUST00000081170 GeneID:24051 KEGG:mmu:24051
NextBio:303987 Bgee:P82349 Genevestigator:P82349
GermOnline:ENSMUSG00000029156 Uniprot:P82349
Length = 320
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 94/315 (29%), Positives = 148/315 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 21 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIVLLFILA 78
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 79 VINLLITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNEN 136
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E +T+ +DP H +FST + +
Sbjct: 137 LVITGNNQPIV-----FQQGTTK--LSVEKNKTSITSDIGMQFFDPRTHNILFSTDYETH 189
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + D+
Sbjct: 190 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGDV 249
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVKAD 311
LK+ N S+ L NG + + +LP S +KLC+C G +F+V+
Sbjct: 250 ELKAEN-SIIL---NGTVMVSPTRLPSSSSGDQSGSG-DWVRYKLCMCADG-TLFKVQ-- 301
Query: 312 DIMSHNACHNINTSP 326
+ HN ++ +P
Sbjct: 302 -VTGHNMGCQVSDNP 315
>RGD|1594202 [details] [associations]
symbol:Sgcb "sarcoglycan, beta (dystrophin-associated
glycoprotein)" species:10116 "Rattus norvegicus" [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0016010
"dystrophin-associated glycoprotein complex" evidence=ISO]
[GO:0016012 "sarcoglycan complex" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0035051 "cardiocyte
differentiation" evidence=IEA;ISO] InterPro:IPR006875 Pfam:PF04790
RGD:1594202 GO:GO:0016021 GO:GO:0007010 GO:GO:0035051 GO:GO:0016012
CTD:6443 GeneTree:ENSGT00390000008110 KO:K12566 OMA:NMGCQTS
OrthoDB:EOG4GTKDD EMBL:CH473981 IPI:IPI00958572
RefSeq:NP_001177997.1 UniGene:Rn.98258 Ensembl:ENSRNOT00000002921
GeneID:680229 KEGG:rno:680229 UCSC:RGD:1594202 NextBio:718251
Uniprot:D4A5E5
Length = 320
Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 94/315 (29%), Positives = 148/315 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 21 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIVLLFILA 78
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDIDL-GKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 79 VINLLITLVIWAVIRIGPNGCDSLEFHESGLLRFKQVSDMGIIHPLYKST--VGGRRNEN 136
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E +T+ +DP +FST + +
Sbjct: 137 LVITGNNQPIV-----FQQGTTK--LSVEKNKTSITSDIGMQFFDPRTQNILFSTDYETH 189
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + D+
Sbjct: 190 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMRGDV 249
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVKAD 311
LK+ N S+ L NG + + +LP S +KLC+C G +F+V+
Sbjct: 250 ELKAEN-SIIL---NGTVMVSPTRLPSSSGGDQSGSG-DWVRYKLCMCADG-TLFKVQ-- 301
Query: 312 DIMSHNACHNINTSP 326
+ SHN ++ +P
Sbjct: 302 -VTSHNMGCQVSDNP 315
>UNIPROTKB|F1NLD5 [details] [associations]
symbol:SGCB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0016012 "sarcoglycan complex" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0035051 "cardiocyte
differentiation" evidence=IEA] InterPro:IPR006875 Pfam:PF04790
GO:GO:0016021 GO:GO:0007010 GO:GO:0016012
GeneTree:ENSGT00390000008110 OMA:NMGCQTS EMBL:AADN02031292
IPI:IPI00821446 Ensembl:ENSGALT00000032087 Uniprot:F1NLD5
Length = 320
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 96/321 (29%), Positives = 150/321 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 21 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIVLLFILA 78
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 79 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNED 136
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E + +T+ DP +FST + +
Sbjct: 137 LVITGNNQPIV-----FQQGTTK--LSVEKDKTSITSDIGMEFVDPRTQNTLFSTDYETH 189
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++
Sbjct: 190 EFHLPNGVKILNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFITGKTIEFRMGGNM 249
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKN-LFLDSNLHNAAFKLCVCMPGGRIFRVKA 310
LK+ N S+ L NG + + +LP F + N FKLC+C G +F+V+
Sbjct: 250 ELKAEN-SIIL---NGTVMVSPSRLPSSSYGEQFNNGNW--LRFKLCMCADG-TLFKVQ- 301
Query: 311 DDIMSHN-ACH-NINTSPEHH 329
+ HN C ++N H
Sbjct: 302 --VTGHNMGCQTSVNPCGATH 320
>UNIPROTKB|F1P4K5 [details] [associations]
symbol:SGCB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0016012 "sarcoglycan complex" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR006875
Pfam:PF04790 GO:GO:0016021 GO:GO:0007010 GO:GO:0016012
GeneTree:ENSGT00390000008110 EMBL:AADN02031292 IPI:IPI00651330
Ensembl:ENSGALT00000022640 Uniprot:F1P4K5
Length = 312
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 96/321 (29%), Positives = 150/321 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 13 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIVLLFILA 70
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 71 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNED 128
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E + +T+ DP +FST + +
Sbjct: 129 LVITGNNQPIV-----FQQGTTK--LSVEKDKTSITSDIGMEFVDPRTQNTLFSTDYETH 181
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++
Sbjct: 182 EFHLPNGVKILNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFITGKTIEFRMGGNM 241
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKN-LFLDSNLHNAAFKLCVCMPGGRIFRVKA 310
LK+ N S+ L NG + + +LP F + N FKLC+C G +F+V+
Sbjct: 242 ELKAEN-SIIL---NGTVMVSPSRLPSSSYGEQFNNGNW--LRFKLCMCADG-TLFKVQ- 293
Query: 311 DDIMSHN-ACH-NINTSPEHH 329
+ HN C ++N H
Sbjct: 294 --VTGHNMGCQTSVNPCGATH 312
>UNIPROTKB|Q16585 [details] [associations]
symbol:SGCB "Beta-sarcoglycan" species:9606 "Homo sapiens"
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0016012
"sarcoglycan complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0016010 "dystrophin-associated
glycoprotein complex" evidence=IDA] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007517 "muscle organ development"
evidence=TAS] InterPro:IPR006875 Pfam:PF04790 GO:GO:0005737
GO:GO:0007010 GO:GO:0005887 GO:GO:0005856 GO:GO:0042383
GO:GO:0007517 GO:GO:0035051 GO:GO:0016012 CTD:6443 eggNOG:NOG84633
HOGENOM:HOG000133159 HOVERGEN:HBG004508 KO:K12566 OMA:NMGCQTS
OrthoDB:EOG4GTKDD EMBL:U31116 EMBL:U29586 EMBL:U63801 EMBL:U63796
EMBL:U63797 EMBL:U63798 EMBL:U63800 EMBL:Y09781 EMBL:BC020709
IPI:IPI00002970 PIR:I39151 RefSeq:NP_000223.1 UniGene:Hs.438953
ProteinModelPortal:Q16585 IntAct:Q16585 STRING:Q16585
PhosphoSite:Q16585 DMDM:13431857 PaxDb:Q16585 PRIDE:Q16585
DNASU:6443 Ensembl:ENST00000381431 GeneID:6443 KEGG:hsa:6443
UCSC:uc003gzj.2 GeneCards:GC04M052886 HGNC:HGNC:10806 HPA:HPA011422
MIM:600900 MIM:604286 neXtProt:NX_Q16585 Orphanet:119
PharmGKB:PA35717 InParanoid:Q16585 PhylomeDB:Q16585 ChiTaRS:SGCB
GenomeRNAi:6443 NextBio:25039 PMAP-CutDB:Q16585 ArrayExpress:Q16585
Bgee:Q16585 CleanEx:HS_SGCB Genevestigator:Q16585
GermOnline:ENSG00000163069 Uniprot:Q16585
Length = 318
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 93/315 (29%), Positives = 148/315 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +R+ N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 19 KKSMREKAVERRSVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIILLFILA 76
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 77 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNEN 134
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E +T+ +DP +FST + +
Sbjct: 135 LVITGNNQPIV-----FQQGTTK--LSVENNKTSITSDIGMQFFDPRTQNILFSTDYETH 187
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++
Sbjct: 188 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNM 247
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVKAD 311
LK+ N S+ L NG + + +LP L S +KLC+C G +F+V+
Sbjct: 248 ELKAEN-SIIL---NGSVMVSTTRLPSSSSGDQLGSG-DWVRYKLCMCADG-TLFKVQ-- 299
Query: 312 DIMSHNACHNINTSP 326
+ S N I+ +P
Sbjct: 300 -VTSQNMGCQISDNP 313
>UNIPROTKB|F1SE70 [details] [associations]
symbol:SGCB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035051 "cardiocyte differentiation" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016012
"sarcoglycan complex" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] InterPro:IPR006875 Pfam:PF04790
GO:GO:0016021 GO:GO:0007010 GO:GO:0035051 GO:GO:0016012
GeneTree:ENSGT00390000008110 OMA:NMGCQTS EMBL:CU928766
Ensembl:ENSSSCT00000009669 ArrayExpress:F1SE70 Uniprot:F1SE70
Length = 319
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 89/298 (29%), Positives = 140/298 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 20 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIILLFILA 77
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 78 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNEN 135
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E +T+ +DP +FST + +
Sbjct: 136 LVITGNNQPIV-----FQQGTTK--LSVEKNKTSITSDIGMQFFDPRTQNILFSTDYETH 188
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++
Sbjct: 189 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNM 248
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVK 309
LK+ N S+ L NG + + +LP S +KLC+C G +F+V+
Sbjct: 249 ELKAEN-SIIL---NGTVTVSTTRLPSSSSGDQFGSG-DWVRYKLCMCADG-TLFKVQ 300
>UNIPROTKB|F1PA70 [details] [associations]
symbol:SGCB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016012 "sarcoglycan complex" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] InterPro:IPR006875
Pfam:PF04790 GO:GO:0016021 GO:GO:0007010 GO:GO:0035051
GO:GO:0016012 GeneTree:ENSGT00390000008110 OMA:NMGCQTS
EMBL:AAEX03009057 Ensembl:ENSCAFT00000003166 Uniprot:F1PA70
Length = 320
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 88/298 (29%), Positives = 140/298 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 21 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIILLFILA 78
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 79 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNEN 136
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+E +T+ +DP +FST + +
Sbjct: 137 LVITGNNQPIV-----FQQGTTK--LSVEKNKTSITSDIGMQFFDPRTQNILFSTDYETH 189
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++
Sbjct: 190 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNM 249
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVK 309
LK+ N S+ L NG + + +LP + +KLC+C G +F+V+
Sbjct: 250 ELKAEN-SIIL---NGTVMVSTTRLPSSSSGDQFGAG-DWVRYKLCMCADG-TLFKVQ 301
>UNIPROTKB|A6QP70 [details] [associations]
symbol:SGCB "Beta-sarcoglycan" species:9913 "Bos taurus"
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016012 "sarcoglycan
complex" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] InterPro:IPR006875 Pfam:PF04790 GO:GO:0016021
GO:GO:0005737 GO:GO:0007010 GO:GO:0005856 GO:GO:0042383
GO:GO:0035051 GO:GO:0016012 EMBL:BC149178 IPI:IPI00867134
RefSeq:NP_001095658.1 UniGene:Bt.66812 STRING:A6QP70 PRIDE:A6QP70
Ensembl:ENSBTAT00000053713 GeneID:535372 KEGG:bta:535372 CTD:6443
eggNOG:NOG84633 GeneTree:ENSGT00390000008110 HOGENOM:HOG000133159
HOVERGEN:HBG004508 KO:K12566 OMA:NMGCQTS OrthoDB:EOG4GTKDD
NextBio:20876719 Uniprot:A6QP70
Length = 317
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 88/298 (29%), Positives = 138/298 (46%)
Query: 16 KLSIRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFA 75
K S+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A
Sbjct: 18 KKSMREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIVLLFILA 75
Query: 76 LINXXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSG 132
+IN RIG G +++E L K D+ + LYK ++
Sbjct: 76 VINLIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNEN 133
Query: 133 LRITGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSA 192
L ITG V F T+ LS+ +T+ +DP +FST + +
Sbjct: 134 LVITGNNQPIV-----FQQGTTK--LSVGKNKTSITSDTGMQFFDPRTQNILFSTDYETH 186
Query: 193 DFGLPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDI 252
+F LP GVK L+VQ+ T RI S DL ++ ++GNEG+ + G+TI + ++
Sbjct: 187 EFHLPSGVKSLNVQKASTERITSNATSDLNIKVGGRAIVRGNEGVFIMGKTIQFHMGGNM 246
Query: 253 FLKSVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVK 309
LK+ N S+ L NG + + +LP + +KLC+C G +FRV+
Sbjct: 247 ELKAEN-SIIL---NGTVMVSTNRLPSSSSGDQFGGD-DWVRYKLCMCADG-TLFRVQ 298
>UNIPROTKB|J9P0F1 [details] [associations]
symbol:SGCB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016012 "sarcoglycan complex" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] InterPro:IPR006875
Pfam:PF04790 GO:GO:0016021 GO:GO:0007010 GO:GO:0016012
GeneTree:ENSGT00390000008110 EMBL:AAEX03009057
Ensembl:ENSCAFT00000045882 Uniprot:J9P0F1
Length = 297
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 86/295 (29%), Positives = 138/295 (46%)
Query: 19 IRDKMLLKRNFNRLRHSENFQAGRVIEDPGGSPSHTGLHDGKSFTFWALIGLLYLFALIN 78
+R+K + +RN N+ H+ NF+AG + D TGL K +I LL++ A+IN
Sbjct: 1 MREKAVERRNVNK-EHNSNFKAGYIPIDEDRLHK-TGLRGRKGNLAICVIILLFILAVIN 58
Query: 79 XXXXXXXXXXXRIGW-GMETIEMLPL-LNMVKLYGDID-LGKLYKDDGYFSSFKDSGLRI 135
RIG G +++E L K D+ + LYK ++ L I
Sbjct: 59 LIITLVIWAVIRIGPNGCDSMEFHESGLLRFKQVSDMGVIHPLYKST--VGGRRNENLVI 116
Query: 136 TGRQGGSVHIDVNFGVNRTRRMLSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSADFG 195
TG V F T+ LS+E +T+ +DP +FST + + +F
Sbjct: 117 TGNNQPIV-----FQQGTTK--LSVEKNKTSITSDIGMQFFDPRTQNILFSTDYETHEFH 169
Query: 196 LPRGVKKLDVQQVRTSRIISPIEDDLTLRSETYTRLKGNEGISMEGRTITWTADKDIFLK 255
LP GVK L+VQ+ T RI S DL ++ + ++GNEG+ + G+TI + ++ LK
Sbjct: 170 LPSGVKSLNVQKASTERITSNATSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMELK 229
Query: 256 SVNGSLTLAAENG-IFLEVKKLPFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVK 309
+ N S+ L NG + + +LP + +KLC+C G +F+V+
Sbjct: 230 AEN-SIIL---NGTVMVSTTRLPSSSSGDQFGAG-DWVRYKLCMCADG-TLFKVQ 278
>UNIPROTKB|B7Z635 [details] [associations]
symbol:SGCB "cDNA FLJ57888, highly similar to
Beta-sarcoglycan" species:9606 "Homo sapiens" [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0016012 "sarcoglycan
complex" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR006875 Pfam:PF04790 GO:GO:0016021
GO:GO:0007010 EMBL:AC093858 GO:GO:0016012 HOVERGEN:HBG004508
UniGene:Hs.438953 HGNC:HGNC:10806 ChiTaRS:SGCB EMBL:AK299765
IPI:IPI01015886 STRING:B7Z635 Ensembl:ENST00000535450
UCSC:uc011bzp.1 Uniprot:B7Z635
Length = 248
Score = 183 (69.5 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 53/170 (31%), Positives = 87/170 (51%)
Query: 158 LSIEPEGVRVTNVKEFNVYDPTDHLPIFSTGFRSADFGLPRGVKKLDVQQVRTSRIISPI 217
LS+E +T+ +DP +FST + + +F LP GVK L+VQ+ T RI S
Sbjct: 83 LSVENNKTSITSDIGMQFFDPRTQNILFSTDYETHEFHLPSGVKSLNVQKASTERITSNA 142
Query: 218 EDDLTLRSETYTRLKGNEGISMEGRTITWTADKDIFLKSVNGSLTLAAENG-IFLEVKKL 276
DL ++ + ++GNEG+ + G+TI + ++ LK+ N S+ L NG + + +L
Sbjct: 143 TSDLNIKVDGRAIVRGNEGVFIMGKTIEFHMGGNMELKAEN-SIIL---NGSVMVSTTRL 198
Query: 277 PFVKKNLFLDSNLHNAAFKLCVCMPGGRIFRVKADDIMSHNACHNINTSP 326
P L S +KLC+C G +F+V+ + S N I+ +P
Sbjct: 199 PSSSSGDQLGSG-DWVRYKLCMCADG-TLFKVQ---VTSQNMGCQISDNP 243
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.420 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 332 321 0.00085 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 603 (64 KB)
Total size of DFA: 212 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.45u 0.14s 24.59t Elapsed: 00:00:02
Total cpu time: 24.45u 0.14s 24.59t Elapsed: 00:00:02
Start: Thu Aug 15 17:19:39 2013 End: Thu Aug 15 17:19:41 2013