BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6707
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1H349|SOX6_XENTR Transcription factor Sox-6 OS=Xenopus tropicalis GN=sox6 PE=2 SV=1
Length = 777
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 55/74 (74%), Positives = 66/74 (89%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWKAMSN EKQPYYEEQ+RLSK+H+EK+P+Y+Y+PRPKRTCIVDGKK+RI EYK LMR
Sbjct: 605 GSRWKAMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMR 664
Query: 203 QRRNEMRQLWCRGE 216
RR EMRQ + G+
Sbjct: 665 SRRQEMRQFFTVGQ 678
>sp|P35711|SOX5_HUMAN Transcription factor SOX-5 OS=Homo sapiens GN=SOX5 PE=1 SV=3
Length = 763
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWKAM+N EKQPYYEEQ+RLSK H+EK+PDY+Y+PRPKRTC+VDGKK+RI EYK +MR
Sbjct: 591 GSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMR 650
Query: 203 QRRNEMRQLWCRGEAG--PSGSGGPAFP 228
RR EMRQ + G+ P + G +P
Sbjct: 651 NRRQEMRQYFNVGQQAQIPIATAGVVYP 678
>sp|P35710|SOX5_MOUSE Transcription factor SOX-5 OS=Mus musculus GN=Sox5 PE=1 SV=2
Length = 763
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWKAM+N EKQPYYEEQ+RLSK H+EK+PDY+Y+PRPKRTC+VDGKK+RI EYK +MR
Sbjct: 591 GSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMR 650
Query: 203 QRRNEMRQLWCRGEAG--PSGSGGPAFP 228
RR EMRQ + G+ P + G +P
Sbjct: 651 NRRQEMRQYFNVGQQAQIPIATAGVVYP 678
>sp|Q5RCU4|SOX6_PONAB Transcription factor SOX-6 OS=Pongo abelii GN=SOX6 PE=2 SV=1
Length = 787
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 66/74 (89%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+MSN EKQPYYEEQ+RLSK+H+EK+P+Y+Y+PRPKRTCIVDGKK+RI EYK LMR
Sbjct: 615 GSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMR 674
Query: 203 QRRNEMRQLWCRGE 216
RR EMRQ + G+
Sbjct: 675 SRRQEMRQFFTVGQ 688
>sp|P35712|SOX6_HUMAN Transcription factor SOX-6 OS=Homo sapiens GN=SOX6 PE=1 SV=3
Length = 828
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 66/74 (89%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+MSN EKQPYYEEQ+RLSK+H+EK+P+Y+Y+PRPKRTCIVDGKK+RI EYK LMR
Sbjct: 656 GSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMR 715
Query: 203 QRRNEMRQLWCRGE 216
RR EMRQ + G+
Sbjct: 716 SRRQEMRQFFTVGQ 729
>sp|P40645|SOX6_MOUSE Transcription factor SOX-6 OS=Mus musculus GN=Sox6 PE=1 SV=2
Length = 827
Score = 127 bits (320), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 66/74 (89%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+MSN EKQPYYEEQ+RLSK+H+EK+P+Y+Y+PRPKRTCIVDGKK+RI EYK LMR
Sbjct: 655 GSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMR 714
Query: 203 QRRNEMRQLWCRGE 216
RR EMRQ + G+
Sbjct: 715 SRRQEMRQFFTVGQ 728
>sp|Q28EW4|SOX13_XENTR Transcription factor Sox-13 OS=Xenopus tropicalis GN=sox13 PE=2
SV=1
Length = 566
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%), Gaps = 5/86 (5%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+MSNAEKQPYYEEQ+RLS+ H+E++PDY+Y+PRPKRTCIV+GK++R+ EYK LM+
Sbjct: 413 GSRWKSMSNAEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGKRLRVGEYKALMK 472
Query: 203 QRRNEMRQLWCRGEAG-----PSGSG 223
RR + RQ + G PS SG
Sbjct: 473 NRRQDTRQGYVITSIGALQCPPSPSG 498
>sp|P40649|SOX13_XENLA Transcription factor Sox-13 OS=Xenopus laevis GN=sox13 PE=2 SV=3
Length = 567
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+MSN EKQPYYEEQ+RLS+ H+E++PDY+Y+PRPKRTCIV+GK++R+ EYK LM+
Sbjct: 427 GSRWKSMSNGEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGKRLRVGEYKALMK 486
Query: 203 QRRNEMRQLWCRGEAGPSGSGGPAFPFPGDGSLSPSD 239
RR + R L + PS SG + G+ S SP +
Sbjct: 487 NRRQDTRSLG-SLQCPPSPSGFSSQSLLGNLSQSPQE 522
>sp|B3DM43|SOX5_XENTR Transcription factor Sox-5 OS=Xenopus tropicalis GN=sox5 PE=2 SV=1
Length = 753
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 59/65 (90%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWKAM+N EKQPYYEEQ+RLSK H+EK+PDY+Y+PRPKRTC+VDGKK+RI EYK +MR
Sbjct: 592 GSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMR 651
Query: 203 QRRNE 207
RR +
Sbjct: 652 SRRQQ 656
>sp|P40647|SOX5_XENLA Transcription factor Sox-5 OS=Xenopus laevis GN=sox5 PE=2 SV=2
Length = 757
Score = 114 bits (286), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 58/63 (92%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+M+N EKQPYYEEQ+RLSK H+EK+PDY+Y+PRPKRTC+VDGKK+RI EYK +MR
Sbjct: 594 GSRWKSMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMR 653
Query: 203 QRR 205
RR
Sbjct: 654 SRR 656
>sp|Q9UN79|SOX13_HUMAN Transcription factor SOX-13 OS=Homo sapiens GN=SOX13 PE=1 SV=3
Length = 622
Score = 114 bits (285), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 62/71 (87%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+M+N EKQPYYEEQ+RLS+ H+EK+PDY+Y+PRPKRTCIV+GK++R+ EYK LMR
Sbjct: 459 GSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMR 518
Query: 203 QRRNEMRQLWC 213
RR + RQ +
Sbjct: 519 TRRQDARQSYV 529
>sp|Q04891|SOX13_MOUSE Transcription factor SOX-13 OS=Mus musculus GN=Sox13 PE=2 SV=4
Length = 613
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 61/70 (87%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G+RWK+M+N EKQPYYEEQ+RLS+ H+EK+PDY+Y+PRPKRTC+V+G+++R+ EYK LMR
Sbjct: 451 GSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCVVEGRRLRVGEYKALMR 510
Query: 203 QRRNEMRQLW 212
RR RQ +
Sbjct: 511 TRRQGARQSY 520
>sp|Q6NVN0|SOX2_XENTR Transcription factor Sox-2 OS=Xenopus tropicalis GN=sox2 PE=2 SV=1
Length = 311
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+P+ +E RL LHM++HPD
Sbjct: 46 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPD 103
Query: 175 YRYRPRPKRTCIVDGKKMRI 194
Y+YRPR K ++ K +
Sbjct: 104 YKYRPRRKTKTLMKKDKYTL 123
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 17/109 (15%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+P+ +E RL LHM++HPD
Sbjct: 46 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPD 103
Query: 175 YRYRPRPKRTCIVDGKKMRISEYKTLMRQRRNEMRQLWCRGEAGPSGSG 223
Y+YRPR K ++ KK + + L+ N M G G G+G
Sbjct: 104 YKYRPRRKTKTLM--KKDKYTLPGGLLAPGANAM----TSGVGGSLGAG 146
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+P+ +E RL LHM++HPD
Sbjct: 48 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPD 105
Query: 175 YRYRPRPKRTCIV 187
Y+YRPR K ++
Sbjct: 106 YKYRPRRKTKTLM 118
>sp|Q2PG84|SOX1_XENLA Transcription factor Sox-1 OS=Xenopus laevis GN=sox1 PE=2 SV=1
Length = 393
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPR 180
GA WK MS AEK+P+ +E RL LHM++HPDY+YRPR
Sbjct: 69 GAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR 106
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 20/114 (17%)
Query: 82 MYSPHHDKNMYSPHDKNMYSPHDKNMYSPHHDKSEEQDLL------MSVWGAGGESPYKM 135
MYS + +++SP + +P P+ QD + VW G KM
Sbjct: 1 MYSMMMETDLHSPGPQTNTNPGQTG---PNSGSKANQDRVKRPMNAFMVWSRGQRR--KM 55
Query: 136 PEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPR 180
+E P GA WK MS AEK+P+ +E RL +HM++HPDY+YRPR
Sbjct: 56 AQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPR 109
>sp|O57401|SOX1_CHICK Transcription factor SOX-1 OS=Gallus gallus GN=SOX1 PE=2 SV=1
Length = 373
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK MS AEK+P+ +E RL LHM++HPD
Sbjct: 57 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPD 114
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 115 YKYRPR 120
>sp|A2TED3|SOX1_XENTR Transcription factor Sox-1 OS=Xenopus tropicalis GN=sox1 PE=2 SV=1
Length = 401
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPR 180
GA WK MS AEK+P+ +E RL LHM++HPDY+YRPR
Sbjct: 72 GAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR 109
>sp|P36396|SRY_URSAR Sex-determining region Y protein OS=Ursus arctos GN=SRY PE=3 SV=2
Length = 232
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G +W+ ++ AEK P++EE RL +H +K+PDY+YRPR K T D K + + TL R
Sbjct: 89 GYQWEMLTEAEKWPFFEEAQRLQAMHRQKYPDYKYRPRRKATPQKDDKLLPSASSSTLCR 148
Query: 203 QRR 205
Q R
Sbjct: 149 QVR 151
>sp|Q6P0E1|SOX2_DANRE Transcription factor Sox-2 OS=Danio rerio GN=sox2 PE=2 SV=1
Length = 315
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 11/80 (13%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S +EK+P+ +E RL LHM++HPD
Sbjct: 47 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPD 104
Query: 175 YRYRPRPKRTCIVDGKKMRI 194
Y+YRPR K ++ K +
Sbjct: 105 YKYRPRRKTKTLMKKDKYTL 124
>sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2
Length = 391
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK MS AEK+P+ +E RL LHM++HPD
Sbjct: 60 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPD 117
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 118 YKYRPR 123
>sp|P53783|SOX1_MOUSE Transcription factor SOX-1 OS=Mus musculus GN=Sox1 PE=2 SV=1
Length = 391
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPR 180
GA WK MS AEK+P+ +E RL LHM++HPDY+YRPR
Sbjct: 86 GAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPR 123
>sp|Q2Z1R2|SOX1B_DANRE Transcription factor Sox-1b OS=Danio rerio GN=sox1b PE=2 SV=1
Length = 340
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK MS AEK+P+ +E RL +HM++HPD
Sbjct: 46 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLRAMHMKEHPD 103
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 104 YKYRPR 109
>sp|P54231|SOX2_SHEEP Transcription factor SOX-2 OS=Ovis aries GN=SOX2 PE=3 SV=1
Length = 320
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S EK+P+ +E RL LHM++HPD
Sbjct: 53 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPD 110
Query: 175 YRYRPRPKRTCIVDGKKMRI 194
Y+YRPR K ++ K +
Sbjct: 111 YKYRPRRKTKTLMKKDKYTL 130
>sp|P48431|SOX2_HUMAN Transcription factor SOX-2 OS=Homo sapiens GN=SOX2 PE=1 SV=1
Length = 317
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S EK+P+ +E RL LHM++HPD
Sbjct: 50 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPD 107
Query: 175 YRYRPRPKRTCIVDGKKMRI 194
Y+YRPR K ++ K +
Sbjct: 108 YKYRPRRKTKTLMKKDKYTL 127
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S EK+P+ +E RL LHM++HPD
Sbjct: 52 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPD 109
Query: 175 YRYRPRPKRTCIVDGKKMRI 194
Y+YRPR K ++ K +
Sbjct: 110 YKYRPRRKTKTLMKKDKYTL 129
>sp|Q6TC41|SRY_MONSC Sex-determining region Y protein OS=Monachus schauinslandi GN=SRY
PE=3 SV=1
Length = 221
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
G +WK ++ AEK P++EE RL +H EK+PDY+YRPRPK
Sbjct: 89 GYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDYKYRPRPK 128
>sp|Q6EJB7|SOX3_DANRE Transcription factor Sox-3 OS=Danio rerio GN=sox3 PE=1 SV=1
Length = 300
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +++AEK+P+ +E RL +HM++HPD
Sbjct: 44 VWSRGQRR--KMAQENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPD 101
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 102 YKYRPR 107
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKM 192
GA WK +S AEK+P+ +E RL +HM++HPDY+YRPR K ++ K
Sbjct: 43 GAEWKLLSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKF 92
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPRPK 182
Y+YRPR K
Sbjct: 75 YKYRPRRK 82
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPRPK 182
Y+YRPR K
Sbjct: 75 YKYRPRRK 82
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
GA WK ++ +EK+P+ +E RL LHM++HPDY+YRPR K
Sbjct: 177 GAEWKLLAESEKRPFIDEAKRLRALHMKEHPDYKYRPRRK 216
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 75 YKYRPR 80
>sp|P36389|SRY_HORSE Sex-determining region Y protein OS=Equus caballus GN=SRY PE=2 SV=2
Length = 223
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
G +WK ++ AEK P++EE RL +H EK+PDY+YRPR K
Sbjct: 89 GCQWKMLTEAEKLPFFEEAQRLRAMHQEKYPDYKYRPRRK 128
>sp|Q6TC38|SRY_MIRLE Sex-determining region Y protein OS=Mirounga leonina GN=SRY PE=3
SV=1
Length = 218
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G +WK ++ AEK P++EE RL +H EK+PDY+YRPR K K + + TL R
Sbjct: 89 GYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDYKYRPRRKALPQKSDKLLPAASSSTLCR 148
Query: 203 Q 203
Q
Sbjct: 149 Q 149
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKM 192
GA WK ++ AEK+P+ +E RL +HM+ HPDY+YRPR K ++ K
Sbjct: 43 GAEWKLLTEAEKRPFIDEAKRLRAMHMKDHPDYKYRPRRKPKTLLKKDKF 92
>sp|Q9XT60|SRY_CANFA Sex-determining region Y protein OS=Canis familiaris GN=SRY PE=3
SV=1
Length = 220
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRT 184
G +WK ++ AEK P++EE RL +H EK+PDY+YRPR K T
Sbjct: 88 GYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDYKYRPRRKAT 129
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 75 YKYRPR 80
>sp|Q5FWM3|SOX3B_XENLA Transcription factor Sox-3-B OS=Xenopus laevis GN=sox3-b PE=2 SV=1
Length = 307
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 26/114 (22%)
Query: 91 MYSPHDKNMYSPHDK---------------NMYSPHHDKSEEQDLLMSVWGAGGESPYKM 135
MYS D +M SP + N +P D+ + VW G KM
Sbjct: 1 MYSMLDTDMKSPVQQSNALSGGPGTPGGKGNTSTPDQDRVKRPMNAFMVWSRGQRR--KM 58
Query: 136 PEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPR 180
+E P GA WK +S++EK+P+ +E RL +HM+ +PDY+YRPR
Sbjct: 59 AQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLRAVHMKDYPDYKYRPR 112
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 75 YKYRPR 80
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S AEK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPR 180
Y+YRPR
Sbjct: 75 YKYRPR 80
>sp|P47792|SX19A_DANRE Transcription factor Sox-19a OS=Danio rerio GN=sox19a PE=1 SV=2
Length = 297
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 11/73 (15%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +++AEK+P+ +E RL LHM+++PD
Sbjct: 62 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPD 119
Query: 175 YRYRPRPKRTCIV 187
Y+Y+PR K ++
Sbjct: 120 YKYKPRRKTKPVL 132
>sp|Q863D9|SRY_ALCAC Sex-determining region Y protein OS=Alces alces cameloides GN=SRY
PE=3 SV=1
Length = 229
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
G WK +++AEK+P++EE RL +H +K+PDY+YRPR K
Sbjct: 89 GYEWKRLTDAEKRPFFEEAQRLLAIHRDKYPDYKYRPRRK 128
>sp|Q6TC39|SRY_MIRAN Sex-determining region Y protein OS=Mirounga angustirostris GN=SRY
PE=3 SV=1
Length = 218
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRISEYKTLMR 202
G +WK ++ AEK P++EE RL H EK+PDY+YRPR K K + + TL R
Sbjct: 89 GYQWKMLTEAEKWPFFEEAQRLQATHREKYPDYKYRPRRKALPQKSDKLLPAASSSTLCR 148
Query: 203 Q 203
Q
Sbjct: 149 Q 149
>sp|Q6TC27|SRY_ENHLU Sex-determining region Y protein OS=Enhydra lutris GN=SRY PE=3 SV=1
Length = 219
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
G +WK ++ AEK+P++EE R+ +H EK+PDY+YRPR K
Sbjct: 89 GYQWKMLTEAEKRPFFEEAQRIQAMHREKYPDYKYRPRRK 128
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 124 VWGAGGESPYKMPEETPDK---------GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPD 174
VW G KM +E P GA WK +S +EK+PY +E RL HM++HPD
Sbjct: 17 VWSRGQRR--KMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPD 74
Query: 175 YRYRPRPK 182
Y+YRPR K
Sbjct: 75 YKYRPRRK 82
>sp|Q6TC28|SRY_LUTLU Sex-determining region Y protein OS=Lutra lutra GN=SRY PE=3 SV=1
Length = 219
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPK 182
G +WK ++ AEK+P++EE R+ +H EK+PDY+YRPR K
Sbjct: 89 GYQWKMLTEAEKRPFFEEAQRIQAMHREKYPDYKYRPRRK 128
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKM 192
GA WK ++ +EK+P+ +E RL +HM++HPDY+YRPR K ++ K
Sbjct: 43 GAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKF 92
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 143 GARWKAMSNAEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKM 192
GA WK ++ +EK+P+ +E RL +HM++HPDY+YRPR K ++ K
Sbjct: 43 GAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKF 92
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.128 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,021,530
Number of Sequences: 539616
Number of extensions: 4829792
Number of successful extensions: 29149
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 19346
Number of HSP's gapped (non-prelim): 6394
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)