BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6708
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFV 101
E+DFI++G G+AGS++ASRL+EV W +LL+EAGGD + P GS +D+ +
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 102 TEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEWGYD---AFKFDNVL 158
TE + LS QR P GK LGG+S ++ + Y RG+ DYD+W D + +++VL
Sbjct: 124 TEPEPMACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDVL 183
Query: 159 KYFKKSEFMTDSSKY-NEFHGTQGPFVVKPSP 189
+FKKSE D + E+H G V P
Sbjct: 184 PFFKKSEDNLDLDEVGTEYHAKGGLLPVGKFP 215
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFV 101
E+DFI++G G+AGS++ASRL+EV W +LL+EAGGD + P GS +D+ +
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 102 TEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---GYDAFKFDNVL 158
TE + LS QR P GK LGG+S ++ + Y RG+ DYD+W G + + +VL
Sbjct: 124 TEPERMACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDVL 183
Query: 159 KYFKKSE 165
+FKKSE
Sbjct: 184 PFFKKSE 190
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 98/172 (56%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E R +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPFM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAER 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPR-VDKTFDT 197
G + + + + L YF+K+E T + N++HG GP V S R V+ F+
Sbjct: 114 KGLENWTYLDCLPYFRKAE--TRDAGANDYHGGDGPVHVTTSKRGVNPLFEA 163
>sp|Q66D54|BETA_YERPS Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=betA PE=3 SV=1
Length = 567
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 25/166 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKT 194
+ + + + L YF+K+E T N+FHG +GP V +P++D
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDVGPNDFHGGEGPVSVT-TPKIDNN 155
>sp|B2K8U4|BETA_YERPB Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=betA PE=3 SV=1
Length = 567
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 25/166 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKT 194
+ + + + L YF+K+E T N+FHG +GP V +P++D
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDVGPNDFHGGEGPVSVT-TPKIDNN 155
>sp|Q8P5D7|BETA_XANCP Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=betA PE=3
SV=1
Length = 556
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 25/168 (14%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
+E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 3 REYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETEPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKTF 195
G + + + +VL YF+K+E T N++HG +GP V +P+ D
Sbjct: 114 GLEDWGYRDVLPYFRKAE--TRDIGANDYHGGEGPVSVA-TPKNDNNV 158
>sp|B0RNU9|BETA_XANCB Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain B100) GN=betA PE=3 SV=1
Length = 556
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 25/168 (14%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
+E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 3 REYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETEPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKTF 195
G + + + +VL YF+K+E T N++HG +GP V +P+ D
Sbjct: 114 GLEDWGYRDVLPYFRKAE--TRDIGANDYHGGEGPVSVA-TPKNDNNV 158
>sp|Q4UYN5|BETA_XANC8 Choline dehydrogenase OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=betA PE=3 SV=1
Length = 556
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 25/168 (14%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
+E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 3 REYDYIIIGAGSAGNVLAARLTEDPGVSVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETEPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKTF 195
G + + + +VL YF+K+E T N++HG +GP V +P+ D
Sbjct: 114 GLEDWGYRDVLPYFRKAE--TRDIGANDYHGGEGPVSVA-TPKNDNNV 158
>sp|Q9L4K0|BETA2_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=1 SV=1
Length = 558
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 89/158 (56%), Gaps = 26/158 (16%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQL 91
EFD+II+GAG+AG++LA+RL E ++LL+EAGG P+ ++Y L
Sbjct: 6 EFDYIIIGAGSAGNVLATRLTEDSDVSVLLLEAGGPDYRFDFRTQMPAALAY------PL 59
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WAF T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 60 QGKRYNWAFETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDHWAKQP 115
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L YFKKSE T N++HG GP V
Sbjct: 116 GLEEWDYLSCLPYFKKSE--TRDIGPNDYHGGDGPVSV 151
>sp|B4EX94|BETA_PROMH Choline dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=betA
PE=3 SV=1
Length = 555
Score = 100 bits (248), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 89/157 (56%), Gaps = 26/157 (16%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQLY 92
+D+II+GAG+AG++LA+RL E +LL+EAGG P+ ++Y L
Sbjct: 3 YDYIIIGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------PLQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ TE + M +N+R GKGLGGSS I+ + Y RG++ D+DEW G
Sbjct: 57 GRRYNWAYETEPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDEWAKLPG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + N L YF+K+E T N++HG GP V
Sbjct: 113 LEDWNYLNCLPYFRKAE--TRDIGANDYHGDSGPVSV 147
>sp|Q8PPG8|BETA_XANAC Choline dehydrogenase OS=Xanthomonas axonopodis pv. citri (strain
306) GN=betA PE=3 SV=1
Length = 556
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 25/168 (14%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
+E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 3 REYDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRVDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETEPEPYM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKTF 195
G + + + +VL YF+K+E T N++HG GP V +P+ D
Sbjct: 114 GLEDWSYRDVLPYFRKAE--TRDIGANDYHGGDGPVSVA-TPKNDNNV 158
>sp|Q2T6D0|BETA_BURTA Choline dehydrogenase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=betA PE=3 SV=1
Length = 565
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+EFD+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YF+K+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLEDWTYLDCLPYFRKAE--TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEA 163
>sp|Q3BXK8|BETA_XANC5 Choline dehydrogenase OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=betA PE=3 SV=1
Length = 556
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 93/168 (55%), Gaps = 25/168 (14%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
+E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 3 REYDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETEPEPYM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRVDKTF 195
G + + + +VL YF+K+E T N++HG GP V +P+ D
Sbjct: 114 GLEDWSYRDVLPYFRKAE--TRDIGANDYHGGDGPVSVA-TPKNDNNV 158
>sp|Q13NG7|BETA_BURXL Choline dehydrogenase OS=Burkholderia xenovorans (strain LB400)
GN=betA PE=3 SV=1
Length = 561
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 90/162 (55%), Gaps = 26/162 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
E+D+IIVGAG+AG++LASRLAE +LL+EAGG P+ ++Y
Sbjct: 4 NEYDYIIVGAGSAGNVLASRLAEDADVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAAH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS 188
G + + + + L YF+K+E T N +HG GP V S
Sbjct: 114 AGLENWTYLDCLPYFRKAE--TRDIGANAYHGGDGPVHVTTS 153
>sp|B1Z034|BETA_BURA4 Choline dehydrogenase OS=Burkholderia ambifaria (strain MC40-6)
GN=betA PE=3 SV=1
Length = 566
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEA 163
>sp|A9AMZ9|BETA_BURM1 Choline dehydrogenase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=betA PE=3 SV=1
Length = 566
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 QGLENWTYLDCLPYFKKAE--TRDIGPNDYHGGDGPVSVTTSKPGVNPLFEA 163
>sp|Q39A44|BETA_BURS3 Choline dehydrogenase OS=Burkholderia sp. (strain 383) GN=betA PE=3
SV=1
Length = 566
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGNGPVSVTTSKPGVNPLFEA 163
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=betA PE=3 SV=1
Length = 566
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEA 163
>sp|A0B2F7|BETA_BURCH Choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424)
GN=betA PE=3 SV=1
Length = 566
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEA 163
>sp|Q1BQE2|BETA_BURCA Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054)
GN=betA PE=3 SV=1
Length = 566
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEA 163
>sp|B1K707|BETA_BURCC Choline dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3)
GN=betA PE=3 SV=1
Length = 566
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YFKK+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGSGPVSVTTSKPGVNPLFEA 163
>sp|A4TNP2|BETA_YERPP Choline dehydrogenase OS=Yersinia pestis (strain Pestoides F)
GN=betA PE=3 SV=1
Length = 567
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVSVT-TPKI 152
>sp|Q1CFR7|BETA_YERPN Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=betA PE=3 SV=1
Length = 567
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVSVT-TPKI 152
>sp|Q8ZGW0|BETA_YERPE Choline dehydrogenase OS=Yersinia pestis GN=betA PE=3 SV=1
Length = 567
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVSVT-TPKI 152
>sp|Q1C932|BETA_YERPA Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=betA PE=3 SV=1
Length = 567
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVSVT-TPKI 152
>sp|B4SHV9|BETA_STRM5 Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
R551-3) GN=betA PE=3 SV=1
Length = 560
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 60
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W G
Sbjct: 61 GKRYNWAYKTDPEPFM----NNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPG 116
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N++HG +GP V
Sbjct: 117 LEDWTYLDCLPYFRKAE--TRDIGPNDYHGGEGPLRV 151
>sp|B1JSR0|BETA_YERPY Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=betA PE=3 SV=1
Length = 567
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVNVT-TPKI 152
>sp|A7FKL6|BETA_YERP3 Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=betA PE=3 SV=1
Length = 567
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 93/163 (57%), Gaps = 25/163 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E +LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPRV 191
+ + + + L YF+K+E T N+FHG +GP V +P++
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGEGPVNVT-TPKI 152
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 25/161 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG+ LA+RL E +LL+EAGG + + FP L
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 60
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ TE + M +N+R GKGLGGSS I+ + Y RG++ DYD W G
Sbjct: 61 GRRYNWAYETEPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPG 116
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPF-VVKPS 188
+ + + + L YF+K+E T N++HG +GP V KP
Sbjct: 117 LEDWSYLDCLPYFRKAE--TRDIGPNDYHGGEGPVSVTKPK 155
>sp|B2TCJ8|BETA_BURPP Choline dehydrogenase OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=betA PE=3 SV=1
Length = 561
Score = 98.6 bits (244), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 91/162 (56%), Gaps = 26/162 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
E+D+IIVGAG+AG++LASRL E +LL+EAGG P+ ++ FP
Sbjct: 4 NEYDYIIVGAGSAGNVLASRLTEDADVTVLLLEAGGPDYRFDFRTQMPAALA-FP----- 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAAH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS 188
G + + + + L YF+K+E T + N +HG GP V S
Sbjct: 114 AGLENWTYLDCLPYFRKAE--TRDAGANAYHGGDGPVHVTTS 153
>sp|Q0B711|BETA_BURCM Choline dehydrogenase OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=betA PE=3 SV=1
Length = 566
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 26/162 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS 188
G + + + + L YFKK+E T N++HG GP V S
Sbjct: 114 KGLENWTYLDCLPYFKKAE--TRDVGPNDYHGGNGPVSVTTS 153
>sp|Q3JLL7|BETA_BURP1 Choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b)
GN=betA PE=3 SV=1
Length = 565
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+EFD+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +++R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----NHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YF+K+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLEDWAYLDCLPYFRKAE--TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEA 163
>sp|Q62CH8|BETA_BURMA Choline dehydrogenase OS=Burkholderia mallei (strain ATCC 23344)
GN=betA PE=3 SV=1
Length = 565
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+EFD+II GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 4 REFDYIICGAGSAGNVLATRLTEDPGVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +++R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----NHRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS-PRVDKTFDT 197
G + + + + L YF+K+E T N++HG GP V S P V+ F+
Sbjct: 114 KGLEDWAYLDCLPYFRKAE--TRDVGPNDYHGGDGPVSVTTSKPGVNPLFEA 163
>sp|B2FQ89|BETA_STRMK Choline dehydrogenase OS=Stenotrophomonas maltophilia (strain
K279a) GN=betA PE=3 SV=1
Length = 560
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 60
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W G
Sbjct: 61 GKRYNWAYKTDPEPFM----NNRRMDCGRGKGLGGSSLINGMCYIRGNAMDYDNWASMPG 116
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N++HG GP V
Sbjct: 117 LEDWTYLDCLPYFRKAE--TRDIGPNDYHGGDGPLRV 151
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 89/157 (56%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GKRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N++HG GP V
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDVGSNDYHGATGPVSV 147
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 88/157 (56%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG+ LA+RL E +LL+EAGG + + FP L
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 60
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ TE + M +N+R GKGLGGSS I+ + Y RG++ DYD W G
Sbjct: 61 GRRYNWAYETEPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPG 116
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N++HG +GP V
Sbjct: 117 LEDWSYLDCLPYFRKAE--TRDIGPNDYHGGEGPVSV 151
>sp|B0V945|BETA_ACIBY Choline dehydrogenase OS=Acinetobacter baumannii (strain AYE)
GN=betA PE=3 SV=1
Length = 552
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++T+ + M +N+R GKGLGGSS I+ + Y RG++ D ++W
Sbjct: 58 LQGRRYNWAYLTDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDSGPVSV 150
>sp|B0VST3|BETA_ACIBS Choline dehydrogenase OS=Acinetobacter baumannii (strain SDF)
GN=betA PE=3 SV=1
Length = 552
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++T+ + M +N+R GKGLGGSS I+ + Y RG++ D ++W
Sbjct: 58 LQGRRYNWAYLTDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDSGPVSV 150
>sp|B2HV79|BETA_ACIBC Choline dehydrogenase OS=Acinetobacter baumannii (strain ACICU)
GN=betA PE=3 SV=1
Length = 552
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++T+ + M +N+R GKGLGGSS I+ + Y RG++ D ++W
Sbjct: 58 LQGRRYNWAYLTDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDSGPVSV 150
>sp|B7I895|BETA_ACIB5 Choline dehydrogenase OS=Acinetobacter baumannii (strain AB0057)
GN=betA PE=3 SV=1
Length = 552
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++T+ + M +N+R GKGLGGSS I+ + Y RG++ D ++W
Sbjct: 58 LQGRRYNWAYLTDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDSGPVSV 150
>sp|B7GYG5|BETA_ACIB3 Choline dehydrogenase OS=Acinetobacter baumannii (strain
AB307-0294) GN=betA PE=3 SV=1
Length = 552
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 KEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++T+ + M +N+R GKGLGGSS I+ + Y RG++ D ++W
Sbjct: 58 LQGRRYNWAYLTDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDSGPVSV 150
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II+GAG+AG++LA+RL E +LL+EAGG P+ ++Y
Sbjct: 5 REYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAY------P 58
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WAF T+ + M +N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 59 LQGKRYNWAFETDPEPYM----NNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKI 114
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + L YFK++E T N++HG GP V
Sbjct: 115 PGLEDWNYLQCLPYFKRAE--TRDIGPNDYHGGDGPVSV 151
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 24/158 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
QE+D+IIVGAG+AG+ LA+RL E +LL+EAGG + + FP L
Sbjct: 3 QEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ T+ + M +R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 QGRRYNWAYETDPEPHM----DGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLP 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L YF+K+E T N++HG +GP V
Sbjct: 114 GLENWTYLDCLPYFRKAE--TRDIGPNDYHGGEGPVSV 149
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=betA PE=3 SV=1
Length = 566
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 90/162 (55%), Gaps = 26/162 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
+E+D+II GAG+AG++LA+RL E + +LL+EAGG P+ ++Y
Sbjct: 4 REYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M N+R GKGLGGSS I+ + Y RG++ DYD W
Sbjct: 58 LQGRRYNWAYETDPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTH 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPS 188
G + + + + L YF+K+E T N++HG GP V S
Sbjct: 114 QGLERWTYLDCLPYFRKAE--TRDVGPNDYHGGDGPVSVTTS 153
>sp|Q6FDF9|BETA_ACIAD Choline dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=betA
PE=3 SV=1
Length = 553
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
Q FD+II+GAG+AG++LA+RL E ++LL+EAGG P+ ++Y
Sbjct: 4 QTFDYIIIGAGSAGNVLAARLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAY------P 57
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA++TE + M +N+R GKGLGGSS I+ + Y RG++ D + W
Sbjct: 58 LQGRRYNWAYLTEPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEGWSKL 113
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L Y+KK+E T N++HG GP V
Sbjct: 114 KGLENWTYADCLPYYKKAE--TRDIGGNDYHGDHGPVSV 150
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 89/158 (56%), Gaps = 24/158 (15%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQL 91
EFD+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 3 HEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRLDFRTQMPAALAFP-----L 57
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 58 QGRRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAK 113
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L YF+K+E + N++HG GP V
Sbjct: 114 GLEDWTYHDCLPYFRKAE--SRDIGPNDYHGGDGPVSV 149
>sp|Q88AE7|BETA_PSESM Choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=betA PE=3 SV=1
Length = 568
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG+ LA+RL E +LL+EAGG + + FP L
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGPDYRLDFRTQMPAALAFP-----LQ 60
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ TE + M N+R GKGLGGSS I+ + Y RG++ DYD W G
Sbjct: 61 GRRYNWAYETEPEPHM----DNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPG 116
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N++HG +GP V
Sbjct: 117 LEDWSYLDCLPYFRKAE--TRDIGPNDYHGGEGPVSV 151
>sp|A8GBX9|BETA_SERP5 Choline dehydrogenase OS=Serratia proteamaculans (strain 568)
GN=betA PE=3 SV=1
Length = 555
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 24/157 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY---------FPENRGQLY 92
E+D+II+GAG+AG++LA+RL E ++LL+EAGG + + FP L
Sbjct: 2 EYDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRMDFRTQMPAALAFP-----LQ 56
Query: 93 GSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW----G 148
G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W G
Sbjct: 57 GRRYNWAYETDPEPHM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWAKAPG 112
Query: 149 YDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
+ + + + L YF+K+E T N+FHG GP V
Sbjct: 113 LEDWSYLDCLPYFRKAE--TRDIGPNDFHGGDGPVSV 147
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 27/171 (15%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQL 91
+FD+II+GAG+AG++LA+RL E + +LL+EAGG P+ ++Y L
Sbjct: 2 QFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAY------PL 55
Query: 92 YGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW---- 147
G +WA+ TE + M +N+R GKGLGGSS I+ + Y RG++ D D W
Sbjct: 56 QGKRYNWAYETEPEPYM----NNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEP 111
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPF-VVKPSPRVDKTFDT 197
G + + + + L Y++K+E T N++HG GP V P P + F+
Sbjct: 112 GLEHWSYLDCLPYYRKAE--TRDIGPNDYHGGDGPVSVTTPKPGNNPLFEA 160
>sp|Q02DZ0|BETA_PSEAB Choline dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=betA PE=3 SV=1
Length = 561
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 92/159 (57%), Gaps = 26/159 (16%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------PSNISYFPENRGQ 90
QEFD+II+GAG+AG++LA+RL E ++LL+EAGG P+ ++ FP
Sbjct: 3 QEFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGPDYRFDFRTQMPAALA-FP----- 56
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
L G +WA+ T+ + M +N+R GKGLGGSS I+ + Y RG++ D+D W
Sbjct: 57 LQGRRYNWAYETDPEPYM----NNRRMECGRGKGLGGSSLINGMCYIRGNALDFDGWAKE 112
Query: 148 -GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
G + + + + L YF+K+E T N++HG GP V
Sbjct: 113 PGLEDWSYLDCLPYFRKAE--TRDIGPNDYHGGDGPVSV 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,190,706
Number of Sequences: 539616
Number of extensions: 3201604
Number of successful extensions: 9946
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 9597
Number of HSP's gapped (non-prelim): 242
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)