RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6708
(197 letters)
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 109 bits (273), Expect = 3e-29
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 35 DPDQWP-QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYF---PENRGQ 90
DP + + +D+II G G G +A++L E +L++E G SN P GQ
Sbjct: 16 DPSKVAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQ 75
Query: 91 LYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW--- 147
++G+++D ++T ++N+ I GKGLGGS+ I+ +TR D D W
Sbjct: 76 IFGTTVDQNYLTVPL------INNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKV 129
Query: 148 -GYDAFKFDNVLKYFKKSE---------FMTDSSKYNEFHGTQGPFVVKPSPR 190
G + + +DN+ +Y KK+E S HGT G
Sbjct: 130 FGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDN 182
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 101 bits (251), Expect = 4e-26
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 34 QDPDQWP-QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYF---PENRG 89
DP + D+II G G G A+RL E + ++L++E+G S+ G
Sbjct: 8 TDPKDVSGRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYG 67
Query: 90 QLYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW-- 147
++GSS+D A+ T E + +NQ I G GLGGS+ ++ +TR D W
Sbjct: 68 DIFGSSVDHAYETVEL-----ATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWET 122
Query: 148 --GYDAFKFDNVLKYFKKSEFMTD 169
G + + +DNV Y ++E
Sbjct: 123 VFGNEGWNWDNVAAYSLQAERARA 146
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 94.7 bits (234), Expect = 7e-24
Identities = 21/163 (12%), Positives = 45/163 (27%), Gaps = 16/163 (9%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAF 100
++D +IVG+G G A L + + + + G S + + + F
Sbjct: 3 IKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKF 61
Query: 101 VTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW------------- 147
V Q L + L +S S ++ R S +
Sbjct: 62 VNVIQGQ--LMSVSVPVNTLVVDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVV 119
Query: 148 GYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSPR 190
G + + F + + + + + +
Sbjct: 120 GGMSTHWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAES 162
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 92.6 bits (229), Expect = 3e-23
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 25 NTTSVPHTPQDPDQWPQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYF 84
+ S + D + +D++IVG GT+G LA+ L+E + +L++E G P+
Sbjct: 10 SYLSFAYDATDLEL-EGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSLPTAYPNV 66
Query: 85 PENRGQLYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDY 144
G +Y + T + + S G+ LGG+S I++ Y R ++ Y
Sbjct: 67 LTADGFVYNLQQEDDGKTPVERFV----SEDGIDNVRGRVLGGTSIINAGVYARANTSIY 122
Query: 145 DEWGYDAFKFDNVLKYFKKSE 165
G + D V + ++ E
Sbjct: 123 SASG-VDWDMDLVNQTYEWVE 142
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 86.5 bits (213), Expect = 8e-21
Identities = 20/162 (12%), Positives = 46/162 (28%), Gaps = 20/162 (12%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFP--------------- 85
+++G+G G++ A RL + +VE G
Sbjct: 6 DRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMW 64
Query: 86 ----ENRGQLYGSSMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDS 141
++ + G+ S + G+G+GG S ++
Sbjct: 65 LADKTDQPVSNFMGFGINKSIDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKR 124
Query: 142 RDYDEWGYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPF 183
++E + KYF ++ + ++ +
Sbjct: 125 NYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFESTEW 166
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 75.4 bits (184), Expect = 6e-17
Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 21/157 (13%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD----------------PSNISYFPEN 87
+++G G ++ A RL E L++E G P S + +N
Sbjct: 4 PAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKN 62
Query: 88 RGQLYGSSMDWAFVT----EEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRD 143
R + S W V + +G+ ++ + ++ G+G+GG S ++
Sbjct: 63 RTEAPLGSFLWLDVVNRNIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSY 122
Query: 144 YDEWGYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQ 180
++E + +YF ++ M + +
Sbjct: 123 FEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFED 159
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 73.1 bits (178), Expect = 4e-16
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 13/145 (8%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSM----- 96
+D+IIVGAG G I A RL+E +LL+E GG + + S +
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 97 ---DWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEWGYDAFK 153
+ T+ + + T+ G +GG +S++ Y + D+
Sbjct: 61 PGLFESLFTDSNPFWW----CKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSS 116
Query: 154 FDNVLKYFKKSEFMTDSSKYNEFHG 178
+ N Y K S+ + G
Sbjct: 117 WTNHAPYTSKLSSRLPSTDHPSTDG 141
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4
{Thale cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 41.8 bits (97), Expect = 2e-05
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
E D ++VGAG+AG A +++ + + ++E P
Sbjct: 33 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSP 69
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 41.8 bits (96), Expect = 2e-05
Identities = 11/52 (21%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLY 92
+E+D I++G G IL+ ++ +L ++ S +LY
Sbjct: 5 EEYDVIVLGTGLTECILSGIMSV-NGKKVLHMDRNPYYGGESSSITPLEELY 55
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 41.6 bits (96), Expect = 3e-05
Identities = 12/64 (18%), Positives = 23/64 (35%), Gaps = 7/64 (10%)
Query: 21 DTTTNTTSVPHTPQDPDQWPQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSN 80
D + ++ P D D ++VG+G AG A + ++L+E
Sbjct: 1 DKSERQAALASAPHD------TVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVIGG 53
Query: 81 ISYF 84
+
Sbjct: 54 NAKL 57
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 41.2 bits (95), Expect = 3e-05
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
+D I++G G +G + A AE N+LL++ G
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNKL 37
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig
(Sus scrofa) [TaxId: 9823]}
Length = 380
Score = 41.0 bits (95), Expect = 3e-05
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRS-----WNILLVEAGGDP 78
E D +IVGAG AG A+RL ++ + + LVE
Sbjct: 32 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 73
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 297
Score = 40.6 bits (93), Expect = 5e-05
Identities = 8/35 (22%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAG 75
++D I++G G IL+ L+ +L ++
Sbjct: 4 TDYDVIVLGTGITECILSGLLSV-DGKKVLHIDKQ 37
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO
{Bacillus sp. [TaxId: 1409]}
Length = 276
Score = 40.1 bits (92), Expect = 7e-05
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDW 98
+ ++ +++G G GS +A LA+ + N L E+G + G L +
Sbjct: 3 RHYEAVVIGGGIIGSAIAYYLAK-ENKNTALFESGTMGGRTTSA--AAGMLGAHAECE 57
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 39.7 bits (91), Expect = 8e-05
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVEA---GGDPSNISYFP 85
+D I++G G+ G A R A + + LVE GG N+ P
Sbjct: 2 YDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSRLGGTCVNVGCVP 46
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 288
Score = 39.7 bits (91), Expect = 1e-04
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISY 83
D +I GAG G A L + + L+E+ + +
Sbjct: 2 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGV 42
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 39.3 bits (90), Expect = 1e-04
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
FD I+VGAG+ G +LA+ + LLV+A P
Sbjct: 2 THFDVIVVGAGSMGMAAGYQLAK-QGVKTLLVDAFDPP 38
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 39.1 bits (90), Expect = 1e-04
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEA----GGDPSNISYFPENRGQLYGSSM 96
+ D +I+G G AG + A + A+ +N VE GG N+ P
Sbjct: 4 KSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLF 62
Query: 97 DWAFVTEEQSGM 108
++ G+
Sbjct: 63 HQMHTEAQKRGI 74
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 38.7 bits (89), Expect = 2e-04
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
Q + II+GAG AG A++LA+ ++ + + G
Sbjct: 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKKI 39
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 38.4 bits (88), Expect = 2e-04
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 39 WPQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYF 84
+ D +I+G+G AG A + ++L+E P +
Sbjct: 20 VKETTDVVIIGSGGAGLAAAVSARD-AGAKVILLEKEPIPGGNTKL 64
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 38.2 bits (88), Expect = 3e-04
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVEA 74
+D+IIVG+G G++ A+ L + + +L++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKK-LNKKVLVIEK 32
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 37.9 bits (87), Expect = 4e-04
Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 5/71 (7%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEA----GGDPSNISYFPENRGQLYGSSM 96
E D +I+G G G + A + A+ + +E GG N+ P
Sbjct: 2 DENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMY 60
Query: 97 DWAFVTEEQSG 107
A + G
Sbjct: 61 HEAKHSFANHG 71
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 37.6 bits (86), Expect = 4e-04
Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEA---GGDPSNISYFPENRGQLYGSSMDW 98
+D+I +G G+ G +R A L+EA GG N+ P+ +
Sbjct: 2 HYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREA 60
Query: 99 AFVTEEQSGM 108
+ G
Sbjct: 61 IHMYGPDYGF 70
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 38.0 bits (87), Expect = 4e-04
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 39 WPQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDW 98
+ ++VGAG+AG + + N++LV+ S G+
Sbjct: 16 PSETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFSGGNSMISAGGMNAVGTKQQT 74
Query: 99 AFVTEE 104
A E+
Sbjct: 75 AHGVED 80
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter
sp., py2 [TaxId: 35809]}
Length = 261
Score = 37.6 bits (86), Expect = 4e-04
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 40 PQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGD 77
P+E+D I +G G AG ++ L L+V+
Sbjct: 40 PREYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWPF 76
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 37.1 bits (85), Expect = 5e-04
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 13/149 (8%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEA---GGDPSNISYFPENRGQLYGSSMDW 98
E + ++VGAG G + A R A+ + +VE GG N+ P +
Sbjct: 3 ETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQ 61
Query: 99 AFVTEEQSGMFLSLSNQRTTIPCG---------KGLGGSSSIHSLYYTRGDSRDYDEWGY 149
A +EE +++ + G+ G + + +G++ D
Sbjct: 62 AKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTV 121
Query: 150 DAFKFDNVLKYFKKSEFMTDSSKYNEFHG 178
D+ Y K+ + S+ E G
Sbjct: 122 RVVNGDSAQTYTFKNAIIATGSRPIELVG 150
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 37.2 bits (85), Expect = 5e-04
Identities = 7/58 (12%), Positives = 20/58 (34%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDW 98
+ +D +++GAG+ G A + + +++ Y + +
Sbjct: 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPK 59
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 37.3 bits (85), Expect = 6e-04
Identities = 8/58 (13%), Positives = 21/58 (36%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDW 98
+ FD +++GAG+ G A A + + +++ + + +
Sbjct: 2 KIFDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPK 59
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 36.9 bits (84), Expect = 6e-04
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAF 100
Q+FD I++GAG G + A + A+ L+E + +
Sbjct: 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALL 60
Query: 101 VTEEQSGMF 109
+ +
Sbjct: 61 DSSYKFHEA 69
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 36.8 bits (84), Expect = 7e-04
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEA---GGDPSNISYFP 85
+D++++G G+ G A R AE +VE+ GG N+ P
Sbjct: 3 SYDYLVIGGGSGGLASARRAAE-LGARAAVVESHKLGGTCVNVGCVP 48
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide
dehydrogenase {Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 36.9 bits (84), Expect = 7e-04
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAG 75
+ +I+G G G + A R + +LVE
Sbjct: 5 QTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQ 37
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 311
Score = 36.8 bits (84), Expect = 9e-04
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVR-SWNILLVEAGGDP 78
D IIVGAG++G A +A+ R + ++E+ P
Sbjct: 50 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 87
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 36.1 bits (82), Expect = 0.001
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGG 76
E+D +++G G G A A+ + +VE
Sbjct: 6 EYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYK 39
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 36.4 bits (83), Expect = 0.001
Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 20/75 (26%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAF 100
+EFD +++GAG AG A ++++ L+ + S A
Sbjct: 6 REFDAVVIGAGGAGMRAALQISQ-SGQTCALLS--------------KVFPTRSHTVSA- 49
Query: 101 VTEEQSGMFLSLSNQ 115
Q G+ ++L N
Sbjct: 50 ----QGGITVALGNT 60
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 36.3 bits (82), Expect = 0.001
Identities = 8/39 (20%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 40 PQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
P +VG +G A L + ++ + E P
Sbjct: 2 PTTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSPQP 39
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 36.0 bits (82), Expect = 0.002
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAG 75
D +I+G+G AG LA RLA+ ++++ G
Sbjct: 6 HSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKG 38
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 35.9 bits (81), Expect = 0.002
Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 41 QEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAG 75
Q D +++G G AG A + + + +++
Sbjct: 4 QYCDSLVIGGGLAGLRAAVATQQ-KGLSTIVLSLI 37
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase
{Soil-living yeast (Trichosporon cutaneum) [TaxId:
5554]}
Length = 360
Score = 35.5 bits (80), Expect = 0.003
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Query: 44 DFIIVGAGTAGSILASRLAE----VRSWNILLVEAGGDPSNIS 82
D +IVGAG AG + A L+E + +++
Sbjct: 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNG 51
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 35.0 bits (79), Expect = 0.003
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 40 PQEFDFIIVGAGTAGSILASRLAEV-RSWNILLVEAGGDPS 79
P F+++G GTA A + +L+V +
Sbjct: 2 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 42
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate
hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 35.3 bits (80), Expect = 0.003
Identities = 8/39 (20%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNIS 82
I+GAG +G +L L + + +++E +
Sbjct: 4 QVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLG 41
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 35.2 bits (80), Expect = 0.003
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 40 PQEFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
P+E D ++VGAG +G RL E ++ ++E GD
Sbjct: 5 PEEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGDV 42
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 35.1 bits (79), Expect = 0.003
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPS 79
+FD II+G G+ G A A+ +++++
Sbjct: 3 DFDLIIIGGGSGGLAAAKEAAK-FDKKVMVLDFVTPTP 39
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 34.2 bits (77), Expect = 0.008
Identities = 11/37 (29%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 42 EFDFIIVGAGTAG---SILASRLAEVRSWNILLVEAG 75
E D +I+G G +G + A+ A++ + LVE
Sbjct: 21 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKA 57
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 34.0 bits (76), Expect = 0.008
Identities = 18/104 (17%), Positives = 34/104 (32%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFVTE 103
+I+GAG G+ LA L NI +++ G G ++ ++ +
Sbjct: 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASF 62
Query: 104 EQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW 147
+ + LS + C +GG + R
Sbjct: 63 AKYTVEKLLSLTEDGVSCFNQVGGLEVATTETRLADLKRKLGYA 106
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 33.9 bits (76), Expect = 0.009
Identities = 8/64 (12%), Positives = 21/64 (32%), Gaps = 3/64 (4%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFVTEEQ 105
+++G+G G A LA + +++ ++ S G++ +
Sbjct: 10 VVLGSGVIGLSSALILAR-KGYSVHILARDLPEDVSSQ--TFASPWAGANWTPFMTLTDG 66
Query: 106 SGMF 109
Sbjct: 67 PRQA 70
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 33.6 bits (75), Expect = 0.010
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
+ +VG G +G +A L R + +L+E+
Sbjct: 2 NVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARL 35
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase
{Escherichia coli [TaxId: 562]}
Length = 311
Score = 33.4 bits (75), Expect = 0.012
Identities = 12/35 (34%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 42 EFDFIIVGAGTAGSILASRLAEVRS-WNILLVEAG 75
+ D IVGAG AG A A+ I L+
Sbjct: 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKV 39
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 33.2 bits (74), Expect = 0.015
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEA 74
D ++VG G +G A L + N++++EA
Sbjct: 1 DVVVVGGGISGMAAAKLLHD-SGLNVVVLEA 30
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 33.0 bits (73), Expect = 0.018
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 44 DFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
I+VGAG +G A RL+E ++L++EA
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 36
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 32.5 bits (73), Expect = 0.022
Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 11/113 (9%)
Query: 45 FIIVGAGTAGSILASRLAEVRSWNILLVEA----GG------DPSNISYFPENRGQLYGS 94
+IVGAG +G+++ +LAE + + +++ GG D ++ +
Sbjct: 5 ILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT 63
Query: 95 SMDWAFVTEEQSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEW 147
+ + + + N+ G+ ++H++ + DE
Sbjct: 64 DNETVWNYVNKHAEMMPYVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEA 116
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 32.4 bits (72), Expect = 0.031
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
+IVGAG AG A LA + ++EA P
Sbjct: 34 VIVGAGMAGLSAAYVLAG-AGHQVTVLEASERP 65
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 31.0 bits (69), Expect = 0.064
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDPS 79
+++GAG G A + E R ++L +
Sbjct: 4 VVIGAGVIGLSTALCIHE-RYHSVLQPLDVKVYA 36
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 31.3 bits (69), Expect = 0.070
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
++GAG +G A +L N+ + EA G
Sbjct: 5 AVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKA 36
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 449
Score = 31.1 bits (68), Expect = 0.079
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
II+G+G +G A +L ++ L+EA
Sbjct: 9 IIIGSGVSGLAAARQLQS-FGMDVTLLEARDRV 40
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 491
Score = 31.2 bits (70), Expect = 0.082
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 37 DQWPQEFDFIIVGAGTAGSILASRLA 62
D P +FD I++G G SI+A+ +
Sbjct: 1 DNLPSDFDVIVIGTGLPESIIAAACS 26
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.8 bits (68), Expect = 0.097
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 6/118 (5%)
Query: 46 IIVGAGTAGSILASRLAEVR-SWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFVTEE 104
I+GAG +G + A L + + L E G P + + +T E
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTE 67
Query: 105 QSGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEWGYDAFKFDNVLKYFK 162
+L + + + + + + + +Y +
Sbjct: 68 PIVGPAALPVYPSPLYR-----DLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQR 120
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 29.9 bits (66), Expect = 0.10
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 45 FIIVGAGTAGSILASRLAE 63
F ++G G G + L
Sbjct: 3 FAVIGLGRFGGSIVKELHR 21
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 30.0 bits (67), Expect = 0.13
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMD 97
+ +IVGAG +G+ A LA+ + L+ D + + P GS ++
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQSLDAVMMPFLPPKPPFPPGSLLE 56
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase
{Pyrococcus furiosus [TaxId: 2261]}
Length = 167
Score = 29.3 bits (64), Expect = 0.20
Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 2/59 (3%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFVTEE 104
+IVG G G LA +L+ +++ + +++ P + + + +
Sbjct: 4 VIVGNGPGGFELAKQLS--QTYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLD 60
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 29.4 bits (64), Expect = 0.20
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 46 IIVGAGTAGSILASRLAEV-RSWNILLVEAG 75
++VG GT G+ A + S + L+E
Sbjct: 6 VVVGGGTGGATAAKYIKLADPSIEVTLIEPN 36
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide
dehydrogenase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 233
Score = 29.7 bits (65), Expect = 0.21
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 46 IIVGAGTAGSILASRLAEV--RSWNILLVEA---GGDPSNISYFP 85
+I+G G AG A A + + +++ GG P
Sbjct: 5 VILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVP 49
>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus
faecalis [TaxId: 1351]}
Length = 198
Score = 29.4 bits (64), Expect = 0.22
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 46 IIVGAGTAGSILASRLAEV-RSWNILLVEAGGDPS 79
I++G+ G L + I E G S
Sbjct: 4 IVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex,
C-terminal domain {Thermus aquaticus [TaxId: 271]}
Length = 126
Score = 27.9 bits (62), Expect = 0.41
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNI 69
IVG G GS LA S+ +
Sbjct: 7 CIVGMGRLGSALADYPGFGESFEL 30
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 28.2 bits (61), Expect = 0.52
Identities = 16/130 (12%), Positives = 39/130 (30%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDPSNISYFPENRGQLYGSSMDWAFVTEEQ 105
++GAG A AS LA + +I + E +S + +L +++ +
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKD 67
Query: 106 SGMFLSLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEWGYDAFKFDNVLKYFKKSE 165
G+ + + + + G + + E
Sbjct: 68 LGVKIICGKSLSENEITLNTLKEEGYKAAFIGIGLPEVLRDPKVKEALSPIKFNRWDLPE 127
Query: 166 FMTDSSKYNE 175
++ + +E
Sbjct: 128 VDPETMQTSE 137
>d2fvga1 b.49.3.1 (A:65-148) Endoglucanase TM1049 {Thermotoga
maritima [TaxId: 2336]}
Length = 84
Score = 27.0 bits (60), Expect = 0.54
Identities = 6/36 (16%), Positives = 11/36 (30%)
Query: 111 SLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDE 146
L + + KG+ G IH ++
Sbjct: 25 ILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFEN 60
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 132
Score = 27.6 bits (60), Expect = 0.70
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 46 IIVGAGTAGSILASRLAE 63
II G G G LA L+E
Sbjct: 4 IIAGIGRVGYTLAKSLSE 21
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 27.8 bits (60), Expect = 0.79
Identities = 18/146 (12%), Positives = 32/146 (21%), Gaps = 5/146 (3%)
Query: 43 FDFIIVGAGTAGSILASRLAEVRSWNILLVE--AGGDPSNISYFPENRGQLYGSSMDWAF 100
+D +IVG+G AG+ A A L+ GG + A
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGI-RTGLMGERFGGQILDTVDIENYISVPKTEGQKLAG 60
Query: 101 VTEEQSGMFL--SLSNQRTTIPCGKGLGGSSSIHSLYYTRGDSRDYDEWGYDAFKFDNVL 158
+ + + +Q + + G A +
Sbjct: 61 ALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKLPNTNW 120
Query: 159 KYFKKSEFMTDSSKYNEFHGTQGPFV 184
+ T V
Sbjct: 121 LEGAVERNRMGEIIIDAKCETNVKGV 146
>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel
Kch {Escherichia coli [TaxId: 562]}
Length = 153
Score = 27.5 bits (60), Expect = 0.83
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 45 FIIVGAGTAGSILASRLAE 63
FI+ G +L +
Sbjct: 6 FIVCGHSILAINTILQLNQ 24
>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein
MthK {Archaeon Methanothermobacter thermautotrophicus
[TaxId: 145262]}
Length = 129
Score = 27.2 bits (59), Expect = 0.95
Identities = 4/29 (13%), Positives = 9/29 (31%), Gaps = 3/29 (10%)
Query: 45 FIIVGAGTAGSILASRLAEVRSWNILLVE 73
+I G + L R + ++
Sbjct: 3 VVICGWSESTLECLREL---RGSEVFVLA 28
>d1ydwa2 d.81.1.5 (A:134-304) Probable oxidoreductase At4g09670
{Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 171
Score = 27.3 bits (59), Expect = 0.96
Identities = 10/120 (8%), Positives = 29/120 (24%), Gaps = 4/120 (3%)
Query: 70 LLVEAG--GDPSNI-SYFPENRGQLYGSSMDWAFVTEEQSGMFLSL-SNQRTTIPCGKGL 125
L ++ G + S F + + + + G
Sbjct: 10 FLSDSERFGQLKTVQSCFSFAGDEDFLKNDIRVKPGLDGLGALGDAGWYAIRATLLANNF 69
Query: 126 GGSSSIHSLYYTRGDSRDYDEWGYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVV 185
++ + + + +++ F+ + + GT+G V
Sbjct: 70 ELPKTVTAFPGAVLNEAGVILSCGASLSWEDGRTATIYCSFLANLTMEITAIGTKGTLRV 129
>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice
blast fungus (Magnaporthe grisea) [TaxId: 148305]}
Length = 182
Score = 26.9 bits (58), Expect = 1.2
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 46 IIVGAGTAGSILASRLAE 63
+++G+G L +
Sbjct: 6 LMLGSGFVTRPTLDVLTD 23
>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 26.8 bits (58), Expect = 1.3
Identities = 4/17 (23%), Positives = 9/17 (52%)
Query: 47 IVGAGTAGSILASRLAE 63
++G G G + + L +
Sbjct: 5 VLGCGALGQLWLTALCK 21
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin
reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Length = 183
Score = 26.6 bits (57), Expect = 1.6
Identities = 7/33 (21%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 46 IIVGAGTAGSILASRLAEVRSWNILLVEAGGDP 78
+++GAG A + L + + L+ G +
Sbjct: 7 VVLGAGLASVSFVAELRQ-AGYQGLITVVGDEA 38
>d2f05a1 a.59.1.1 (A:1-85) Sin3B {Mouse (Mus musculus) [TaxId:
10090]}
Length = 85
Score = 25.6 bits (56), Expect = 1.8
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 150 DAFKFDNVLKYFK--KSEFMTDSSKYNEF 176
D+ +F+N + Y K+ F+ Y F
Sbjct: 3 DSVEFNNAISYVNKIKTRFLDHPEIYRSF 31
>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase
{Pseudomonas putida [TaxId: 303]}
Length = 185
Score = 25.9 bits (55), Expect = 2.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 44 DFIIVGAGTAGSILASRLAE 63
+ +IVG G AG +A L
Sbjct: 5 NVVIVGTGLAGVEVAFGLRA 24
>d1urja_ e.58.1.1 (A:) Infected cell protein 8, ICP8 {Herpes simplex
virus 1 [TaxId: 10298]}
Length = 1122
Score = 25.5 bits (56), Expect = 5.2
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 9/64 (14%)
Query: 8 VASLIYILSYGSEDTTTNTTSVPHTPQDPDQWPQEFDFIIVGAGTAGSILASRLAEVRSW 67
+AS++ + + ++ + P D WP + G TA A+R V ++
Sbjct: 306 LASVMAGDAALALESIVSMAVFDEPPTDISAWP-----LFEGQDTA----AARANAVGAY 356
Query: 68 NILL 71
Sbjct: 357 LARA 360
>d1r46a2 c.1.8.1 (A:32-323) Melibiase {Human (Homo sapiens) [TaxId:
9606]}
Length = 292
Score = 25.2 bits (54), Expect = 5.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 132 HSLYYTRGDSRDYDEWGYDAFKFDNV 157
S Y D++ + +WG D KFD
Sbjct: 116 GSFGYYDIDAQTFADWGVDLLKFDGC 141
>d1s5qb_ a.59.1.1 (B:) Sin3A {Mouse (Mus musculus) [TaxId: 10090]}
Length = 89
Score = 24.1 bits (52), Expect = 6.3
Identities = 6/25 (24%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 154 FDNVLKYFK--KSEFMTDSSKYNEF 176
F++ + Y K+ F Y F
Sbjct: 10 FNHAINYVNKIKNRFQGQPDIYKAF 34
>d2foka1 a.4.5.12 (A:5-143) Restriction endonuclease FokI,
N-terminal (recognition) domain {Flavobacterium
okeanokoites [TaxId: 244]}
Length = 139
Score = 24.1 bits (52), Expect = 9.2
Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 147 WGYDAFKFDNVLKYFKKSEFMTDSSKYNEFHGTQGPFVVKPSP 189
W + KF+N+ + F +S +NE + P +VK S
Sbjct: 6 WVQNPGKFENLKRVV--QVFDRNSKVHNEVKNIKIPTLVKESK 46
>d1x3za1 d.3.1.4 (A:8-327) Peptide:N-glycanase 1, PNG1 {Baker's
yeast(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 320
Score = 24.5 bits (53), Expect = 9.9
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
Query: 145 DEWGYDAFKFDNVLKYFKKSEFMT 168
E Y + +L+YF K +F
Sbjct: 93 GENIYTDYLVKELLRYF-KQDFFK 115
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.402
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 723,851
Number of extensions: 31686
Number of successful extensions: 200
Number of sequences better than 10.0: 1
Number of HSP's gapped: 189
Number of HSP's successfully gapped: 86
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)