BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6709
(288 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340718292|ref|XP_003397603.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Bombus
terrestris]
Length = 355
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTV--K 201
+I+++++ D SL + V KL+YLVSARPTAVNMK AAD + ++ +K VN + K
Sbjct: 62 EIRNEEYMDKKSLRRDVEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMK 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R I IE+MLEKDI+DNKAIG GAQ ++ G + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIAAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH N + AYC+ETRPYNQGAR
Sbjct: 182 VIRSLHKRNSLEHAYCSETRPYNQGAR 208
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 108/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I +E L+ILDQ+LLP S+ + + VED ++ I +MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAIKWENGKLEILDQILLPAISRYIPVKGVEDGWKVINNMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I+++++ D +ELIQL
Sbjct: 62 EIRNEEYMDKKSLRRDVEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+MLEKDI+DNKAIG GAQ ++ + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIAAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSLH N +
Sbjct: 182 VIRSLHKRNSL 192
>gi|380028132|ref|XP_003697763.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Apis
florea]
Length = 355
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTV--K 201
+IK++++ D SL + V KL+YLVSARPTAVNMK AAD + ++ +K VN + +
Sbjct: 62 EIKNEKYIDKKSLRQDVEGKLNYLVSARPTAVNMKIAADELIHLANKLSKDETVNVIEMQ 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R I+ IE+MLEKDI+DNKAIG GAQ ++ G + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIKAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH N + AYC+ETRPYNQGAR
Sbjct: 182 VIRSLHKKNSLELAYCSETRPYNQGAR 208
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 107/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I +E L+ILDQ+LLP S+ + + VED ++ I +MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAIKWENGKLEILDQILLPAMSRYISVRGVEDGWKVINNMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+IK++++ D +ELI L
Sbjct: 62 EIKNEKYIDKKSLRQDVEGKLNYLVSARPTAVNMKIAADELIHLANKLSKDETVNVIEMQ 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+MLEKDI+DNKAIG GAQ ++ + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIKAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSLH N +
Sbjct: 182 VIRSLHKKNSL 192
>gi|350401743|ref|XP_003486247.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Bombus
impatiens]
Length = 355
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTV--K 201
+I+++++ D SL + + KL+YLVSARPTAVNMK AAD + ++ +K VN + K
Sbjct: 62 EIRNEEYMDKKSLRRDIEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMK 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R I IE+MLEKDI+DNKAIG GAQ ++ G + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIAAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH N + AYC+ETRPYNQGAR
Sbjct: 182 VIRSLHKRNSLEHAYCSETRPYNQGAR 208
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 108/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I +E L+ILDQ+LLP S+ + + VED ++ I +MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAIKWENGKLEILDQILLPAISRYIPVKGVEDGWKVINNMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I+++++ D +ELIQL
Sbjct: 62 EIRNEEYMDKKSLRRDIEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+MLEKDI+DNKAIG GAQ ++ + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIAAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSLH N +
Sbjct: 182 VIRSLHKRNSL 192
>gi|156553460|ref|XP_001604505.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Nasonia
vitripennis]
Length = 350
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 110/149 (73%), Gaps = 5/149 (3%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS---VKSSLSEWAKASPVNT 199
V+I+ K + D +L K V EKL+YLV+ARPTAVN+K AAD + ++LS ++SP +
Sbjct: 61 VEIQHKSYEDTKALLKDVKEKLEYLVTARPTAVNIKLAADDFTRLATNLSH-DESSPED- 118
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
+K R+I I SMLEKD++DNKAIG +GA ++ +P L ++THCNTGSLATA YGTA
Sbjct: 119 MKKRIISEITSMLEKDVADNKAIGDHGAAEILKTHPNEKNLRIITHCNTGSLATAGYGTA 178
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIRS+H K+ AYCTETRPYNQGAR
Sbjct: 179 LGVIRSIHSNGKLEHAYCTETRPYNQGAR 207
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 105/190 (55%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I ++ L+ILDQLLLP SK +++ +VED + AI MQVRGAPAIAIVGCL L V
Sbjct: 2 TLQAIKWKSGKLEILDQLLLPAQSKYIEVTSVEDGWNAIYKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPDNE------------------------------------------------- 73
+I+ K + D +
Sbjct: 62 EIQHKSYEDTKALLKDVKEKLEYLVTARPTAVNIKLAADDFTRLATNLSHDESSPEDMKK 121
Query: 74 -LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+I I SMLEKD++DNKAIG +GA ++ +P L ++THCNTGSLATA YGTALGV
Sbjct: 122 RIISEITSMLEKDVADNKAIGDHGAAEILKTHPNEKNLRIITHCNTGSLATAGYGTALGV 181
Query: 133 IRSLHGANKI 142
IRS+H K+
Sbjct: 182 IRSIHSNGKL 191
>gi|383850068|ref|XP_003700639.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Megachile
rotundata]
Length = 355
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 108/147 (73%), Gaps = 2/147 (1%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTV--K 201
+IK++++ D SL + + KL+YLVSARPTAVNMK AA+ + ++ +K VN + K
Sbjct: 62 EIKNEEYMDKKSLRRDIEGKLNYLVSARPTAVNMKIAAEELIQLANKLSKDETVNVIEMK 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R +Q IE+ML+KD++DNKAIG GAQ ++ G + + +LTHCNTGSLATA YGTALG
Sbjct: 122 QRFLQAIEAMLDKDVADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH N + AYC+ETRPYNQGAR
Sbjct: 182 VIRSLHKKNSLEHAYCSETRPYNQGAR 208
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 107/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I +E L+ILDQ+LLP S+ + + VED ++ I +MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAIKWENGRLEILDQILLPAISRYIPVKGVEDGWKVINNMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+IK++++ D ELIQL
Sbjct: 62 EIKNEEYMDKKSLRRDIEGKLNYLVSARPTAVNMKIAAEELIQLANKLSKDETVNVIEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+ML+KD++DNKAIG GAQ ++ + + +LTHCNTGSLATA YGTALG
Sbjct: 122 QRFLQAIEAMLDKDVADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSLH N +
Sbjct: 182 VIRSLHKKNSL 192
>gi|48096956|ref|XP_392553.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Apis
mellifera]
Length = 355
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTV--K 201
+IK++++ D +L + V KL+YLVSARPTAVNMK AAD + ++ +K VN + +
Sbjct: 62 EIKNEKYIDKKNLRQDVEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMQ 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R I+ IE+MLEKDI+DNKAIG GAQ ++ G + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIKAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH N + YC+ETRPYNQGAR
Sbjct: 182 VIRSLHKKNSLELVYCSETRPYNQGAR 208
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 108/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I +E L+ILDQ+LLP S+ + + VED ++ I +MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAIKWENGKLEILDQILLPAMSRYISVRGVEDGWKVINNMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+IK++++ D +ELIQL
Sbjct: 62 EIKNEKYIDKKNLRQDVEGKLNYLVSARPTAVNMKIAADELIQLANKLSKDETVNVIEMQ 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+MLEKDI+DNKAIG GAQ ++ + + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIKAIEAMLEKDIADNKAIGDYGAQEILKNVSGDNFVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSLH N +
Sbjct: 182 VIRSLHKKNSL 192
>gi|157137579|ref|XP_001664017.1| translation initiation factor eif-2b [Aedes aegypti]
gi|122093211|sp|Q16I17.1|MTNA_AEDAE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|108869682|gb|EAT33907.1| AAEL013828-PA [Aedes aegypti]
Length = 360
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I ++F + ++ V KL+YLVSARPTAVNMK AA+ + S + A+ + V+T+
Sbjct: 61 VEIFGEKFDTKQTFKQEVEGKLNYLVSARPTAVNMKLAAEDLISLANALAQDESISVDTM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K R ++ IE ML+KDI+DN AIG+NGA ++ P + +LTHCNTGSLATA YGTAL
Sbjct: 121 KERFLKAIEDMLDKDIADNMAIGKNGADIILSHIPNGGSVRILTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR LH N++ YCTETRPYNQGAR
Sbjct: 181 GVIRKLHEMNRLEHVYCTETRPYNQGAR 208
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 102/191 (53%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I Y L+ILDQLLLP SK +D+ VED ++AI MQVRGAPAIAIVGCL L V
Sbjct: 2 SLKAIKYSNGKLEILDQLLLPAQSKYIDVKGVEDGWKAINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPDNE------------------------------------------------- 73
+I ++F +
Sbjct: 62 EIFGEKFDTKQTFKQEVEGKLNYLVSARPTAVNMKLAAEDLISLANALAQDESISVDTMK 121
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++ IE ML+KDI+DN AIG+NGA ++ P + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFLKAIEDMLDKDIADNMAIGKNGADIILSHIPNGGSVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIR LH N++
Sbjct: 182 VIRKLHEMNRL 192
>gi|170059628|ref|XP_001865446.1| translation initiation factor eif-2b [Culex quinquefasciatus]
gi|167878335|gb|EDS41718.1| translation initiation factor eif-2b [Culex quinquefasciatus]
Length = 328
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/148 (53%), Positives = 102/148 (68%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS--PVNTV 200
V+I ++ F ++ + KL+YLVSARPTAVNMK AAD + +++W + S V +
Sbjct: 36 VEIYNETFITKQMFKQEIEGKLNYLVSARPTAVNMKLAADDLIGMVNDWVEKSVISVTEI 95
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K R I IE+MLEKDIS+N AIG GA+ ++ P S L +LTHCNTGSLATA YGTAL
Sbjct: 96 KERFIHEIEAMLEKDISNNMAIGTFGAERILKDVPSGSSLQLLTHCNTGSLATAGYGTAL 155
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR + N++ +CTETRPYNQGAR
Sbjct: 156 GVIRKIFDQNRLEHVFCTETRPYNQGAR 183
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 83/167 (49%), Gaps = 51/167 (30%)
Query: 27 KLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNEL------------ 74
+ + I VED ++ I MQVRGAPAIAIVGCL L V+I ++ F ++
Sbjct: 1 RYISIAGVEDGWKVISKMQVRGAPAIAIVGCLSLAVEIYNETFITKQMFKQEIEGKLNYL 60
Query: 75 ---------------------------------------IQLIESMLEKDISDNKAIGRN 95
I IE+MLEKDIS+N AIG
Sbjct: 61 VSARPTAVNMKLAADDLIGMVNDWVEKSVISVTEIKERFIHEIEAMLEKDISNNMAIGTF 120
Query: 96 GAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
GA+ ++ P S L +LTHCNTGSLATA YGTALGVIR + N++
Sbjct: 121 GAERILKDVPSGSSLQLLTHCNTGSLATAGYGTALGVIRKIFDQNRL 167
>gi|31242175|ref|XP_321518.1| AGAP001589-PA [Anopheles gambiae str. PEST]
gi|74799227|sp|Q7PKS9.1|MTNA_ANOGA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|30173764|gb|EAA43149.1| AGAP001589-PA [Anopheles gambiae str. PEST]
Length = 351
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 105/150 (70%), Gaps = 6/150 (4%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNT 199
+V+I DKQ+ +L +GE L YLV++RPTAVN+K AAD VK + + V+
Sbjct: 60 VVEIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDG 119
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGT 258
+K +I+ IE MLEKDISDN+AIG NGA L+ GV + L +LTHCNTGSLATA YGT
Sbjct: 120 MKQEVIKAIEYMLEKDISDNRAIGDNGANVLVK---GVDRPLKLLTHCNTGSLATAGYGT 176
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRS++ N + YCTETRPYNQGAR
Sbjct: 177 ALGVIRSVNERNLLEHVYCTETRPYNQGAR 206
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 103/189 (54%), Gaps = 53/189 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y+ L+ILDQLLLP SK + + V+D + AI MQVRGAPAIAIVGCL LVV
Sbjct: 2 TLEAIKYKSGQLQILDQLLLPAESKYIPVAGVKDGWSAIHKMQVRGAPAIAIVGCLSLVV 61
Query: 63 DIKDKQFP---------------------------------------------------D 71
+I DKQ+
Sbjct: 62 EIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDGMK 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
E+I+ IE MLEKDISDN+AIG NGA L+ R L +LTHCNTGSLATA YGTALG
Sbjct: 122 QEVIKAIEYMLEKDISDNRAIGDNGANVLVKGVDR--PLKLLTHCNTGSLATAGYGTALG 179
Query: 132 VIRSLHGAN 140
VIRS++ N
Sbjct: 180 VIRSVNERN 188
>gi|195449892|ref|XP_002072272.1| GK22419 [Drosophila willistoni]
gi|313471317|sp|B4NG41.1|MTNA_DROWI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194168357|gb|EDW83258.1| GK22419 [Drosophila willistoni]
Length = 365
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 105/157 (66%), Gaps = 11/157 (7%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F SL + + KL+YLVSARPTAVNMK AAD + S ++ KA V+ +
Sbjct: 61 VEIYPEEFESKKSLRQEIEGKLNYLVSARPTAVNMKIAADELLSLANDLTKAEDVSVPDM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL---------NPGVSKLNVLTHCNTGSL 251
K R + E+ML+KDI+DN+AIG NGAQA++ G + VLTHCNTGSL
Sbjct: 121 KQRFLNATEAMLQKDIADNRAIGANGAQAILKRVATTLGAAGTSGNGSVRVLTHCNTGSL 180
Query: 252 ATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ATA YGTALGVIR+LH K+ YCTETRPYNQGAR
Sbjct: 181 ATAGYGTALGVIRNLHELGKLEHVYCTETRPYNQGAR 217
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 106/203 (52%), Gaps = 66/203 (32%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK V + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYNRGSLEILDQLLLPVQSKYVAVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQF-------------------------------------------------PD-- 71
+I ++F PD
Sbjct: 62 EIYPEEFESKKSLRQEIEGKLNYLVSARPTAVNMKIAADELLSLANDLTKAEDVSVPDMK 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS------------KLNVLTHCNTG 119
+ E+ML+KDI+DN+AIG NGAQA++ RV+ + VLTHCNTG
Sbjct: 122 QRFLNATEAMLQKDIADNRAIGANGAQAILK---RVATTLGAAGTSGNGSVRVLTHCNTG 178
Query: 120 SLATAEYGTALGVIRSLHGANKI 142
SLATA YGTALGVIR+LH K+
Sbjct: 179 SLATAGYGTALGVIRNLHELGKL 201
>gi|19577378|emb|CAD27760.1| putative translation initiation factor [Anopheles gambiae]
Length = 348
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 103/148 (69%), Gaps = 5/148 (3%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
+V+I DKQ+ +L +GE L YLV++RPTAVN+K AAD VK + E A+ TV
Sbjct: 60 VVEIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQV-ESLLANETVTVD 118
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTAL 260
+ IE MLEKDISDN+AIG NGA L+ GV + L +LTHCNTGSLATA YGTAL
Sbjct: 119 GMKQEAIEYMLEKDISDNRAIGDNGANVLVK---GVDRPLKLLTHCNTGSLATAGYGTAL 175
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRS++ N + YCTETRPYNQGAR
Sbjct: 176 GVIRSVNERNLLEHVYCTETRPYNQGAR 203
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 103/186 (55%), Gaps = 50/186 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y+ L+ILDQLLLP SK + + V+D + AI MQVRGAPAIAIVGCL LVV
Sbjct: 2 TLEAIKYKSGQLQILDQLLLPAESKYIPVAGVKDGWSAIHKMQVRGAPAIAIVGCLSLVV 61
Query: 63 DIKDKQFPD-----------------------------------------NELI------ 75
+I DKQ+ NE +
Sbjct: 62 EIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDGMK 121
Query: 76 -QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ IE MLEKDISDN+AIG NGA L+ R L +LTHCNTGSLATA YGTALGVIR
Sbjct: 122 QEAIEYMLEKDISDNRAIGDNGANVLVKGVDR--PLKLLTHCNTGSLATAGYGTALGVIR 179
Query: 135 SLHGAN 140
S++ N
Sbjct: 180 SVNERN 185
>gi|195053724|ref|XP_001993776.1| GH21593 [Drosophila grimshawi]
gi|313471312|sp|B4JRX2.1|MTNA_DROGR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|193895646|gb|EDV94512.1| GH21593 [Drosophila grimshawi]
Length = 363
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 106/155 (68%), Gaps = 9/155 (5%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F SL + + KL+YLVSARPTAVNMK +AD + + +E +K V +
Sbjct: 61 VEIYPEEFETKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELSKNDDVTVANM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NPG-VSKLNVLTHCNTGSLAT 253
K R + E+MLEKDI+DN+AIG NGA+A+++ +PG S + VLTHCNTGSLAT
Sbjct: 121 KQRFLDATEAMLEKDIADNRAIGSNGAKAILERVAEATGSPGSASPVRVLTHCNTGSLAT 180
Query: 254 AEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
A YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 AGYGTALGVVRHLSELGKLEHVYCTETRPYNQGAR 215
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 108/198 (54%), Gaps = 58/198 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYKRGSLEILDQLLLPVVSKYLPVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +ELI L
Sbjct: 62 EIYPEEFETKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELSKNDDVTVANMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDL------NP-RVSKLNVLTHCNTGSLATA 124
E+MLEKDI+DN+AIG NGA+A+++ +P S + VLTHCNTGSLATA
Sbjct: 122 QRFLDATEAMLEKDIADNRAIGSNGAKAILERVAEATGSPGSASPVRVLTHCNTGSLATA 181
Query: 125 EYGTALGVIRSLHGANKI 142
YGTALGV+R L K+
Sbjct: 182 GYGTALGVVRHLSELGKL 199
>gi|193704600|ref|XP_001943893.1| PREDICTED: methylthioribose-1-phosphate isomerase-like
[Acyrthosiphon pisum]
Length = 363
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 105/148 (70%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F +L + V KL+YL+SARPTAVNMK+AAD + S ++ V+ +
Sbjct: 61 VEISKEEFEKKKALRREVEGKLNYLISARPTAVNMKQAADHLISYINSLDNDESVSAQEM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+ R + IE+MLEKDISDN++IG GA+A+++ ++ +LTHCNTGSLATA +GTAL
Sbjct: 121 QARFVAAIEAMLEKDISDNRSIGEFGAKAILNNVTDGEQVRILTHCNTGSLATAYFGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+R LH A+++ Y TETRPYNQGAR
Sbjct: 181 GVVRCLHSASRLENCYFTETRPYNQGAR 208
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I YE +L++LDQLLLP SK + I VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 TLQAIKYENGTLEVLDQLLLPKESKYIPILGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFP----------------------------------------DNE--------- 73
+I ++F DN+
Sbjct: 62 EISKEEFEKKKALRREVEGKLNYLISARPTAVNMKQAADHLISYINSLDNDESVSAQEMQ 121
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ IE+MLEKDISDN++IG GA+A+++ ++ +LTHCNTGSLATA +GTALG
Sbjct: 122 ARFVAAIEAMLEKDISDNRSIGEFGAKAILNNVTDGEQVRILTHCNTGSLATAYFGTALG 181
Query: 132 VIRSLHGANKI 142
V+R LH A+++
Sbjct: 182 VVRCLHSASRL 192
>gi|195112931|ref|XP_002001025.1| GI10562 [Drosophila mojavensis]
gi|313471313|sp|B4K8A4.1|MTNA_DROMO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|193917619|gb|EDW16486.1| GI10562 [Drosophila mojavensis]
Length = 362
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/154 (53%), Positives = 107/154 (69%), Gaps = 8/154 (5%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I ++F SL + + KL+YLVSARPTAVNMK +AD + + +E K A V +
Sbjct: 61 VEIYPEEFSSKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELTKDDAITVEEM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL---NPGVS---KLNVLTHCNTGSLATA 254
K R ++ E+MLEKDI+DN+AIG NGA+A+++ GV+ + VLTHCNTGSLATA
Sbjct: 121 KQRFLKATEAMLEKDIADNRAIGANGAKAILEHVAEATGVATAGPVRVLTHCNTGSLATA 180
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
YGTALGV+R+L K+ YCTETRPYNQGAR
Sbjct: 181 GYGTALGVVRNLSELGKLEHVYCTETRPYNQGAR 214
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 107/197 (54%), Gaps = 57/197 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYQRGSLEILDQLLLPVVSKYLPVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +ELI L
Sbjct: 62 EIYPEEFSSKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELTKDDAITVEEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVS------KLNVLTHCNTGSLATAE 125
E+MLEKDI+DN+AIG NGA+A+++ + + VLTHCNTGSLATA
Sbjct: 122 QRFLKATEAMLEKDIADNRAIGANGAKAILEHVAEATGVATAGPVRVLTHCNTGSLATAG 181
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGV+R+L K+
Sbjct: 182 YGTALGVVRNLSELGKL 198
>gi|91093825|ref|XP_969152.1| PREDICTED: similar to translation initiation factor eif-2b
[Tribolium castaneum]
gi|270015901|gb|EFA12349.1| hypothetical protein TcasGA2_TC002054 [Tribolium castaneum]
Length = 354
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 106/149 (71%), Gaps = 4/149 (2%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD---SVKSSLSEWAKASPVNT 199
V+++ + F L + + KL++LVS+RPTAVNMK AA+ ++ + LSE ++ + T
Sbjct: 61 VELQRENFETKRQLRQDIEGKLNFLVSSRPTAVNMKIAAEELIALSNKLSE-DESIELET 119
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
+K+R +Q IE+MLEKDI DNK+IG GA+ ++ G S + +LTHCNTGSLATA YGTA
Sbjct: 120 MKSRFLQTIEAMLEKDIHDNKSIGDFGAREILSGVSGDSLVRILTHCNTGSLATAGYGTA 179
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR LH ++ YCTETRPYNQGAR
Sbjct: 180 LGVIRKLHELKRLEHCYCTETRPYNQGAR 208
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 100/186 (53%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I YE +SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLKAIKYENNSLEILDQLLLPAQSKYIQVKGVEDGWRVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFP---------------------------------------------------D 71
+++ + F
Sbjct: 62 ELQRENFETKRQLRQDIEGKLNFLVSSRPTAVNMKIAAEELIALSNKLSEDESIELETMK 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ +Q IE+MLEKDI DNK+IG GA+ ++ S + +LTHCNTGSLATA YGTALG
Sbjct: 122 SRFLQTIEAMLEKDIHDNKSIGDFGAREILSGVSGDSLVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLH 137
VIR LH
Sbjct: 182 VIRKLH 187
>gi|395513042|ref|XP_003760740.1| PREDICTED: methylthioribose-1-phosphate isomerase [Sarcophilus
harrisii]
Length = 358
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 100/141 (70%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTVKTRLIQLI 208
P ++L +V + L YLV+ARPTAVNM +AA + S+ A + + + V+ RLI
Sbjct: 70 PGLEALVTFVQDSLKYLVTARPTAVNMAQAAREMSEVASQEAGQEGATESAVRERLICWA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKD+ DN++IG +GAQ L++ + PG ++ VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 130 EHMLEKDVKDNQSIGDHGAQHLLERVAPGGGQVTVLTHCNTGSLATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ +CTETRPYNQGAR
Sbjct: 190 ALGRLKHVFCTETRPYNQGAR 210
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 103/193 (53%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL---- 58
SL++I Y + SL +LDQLLLP S + +V A++AI++M+VRGAPAIAIVGCL
Sbjct: 2 SLEAIRYHRGSLHVLDQLLLPQQSHYESVTSVRQAWEAIRAMKVRGAPAIAIVGCLSLAV 61
Query: 59 ------------GLVVDIKDK--------------------------QFPDNE------- 73
LV ++D Q E
Sbjct: 62 ELHAGSGGPGLEALVTFVQDSLKYLVTARPTAVNMAQAAREMSEVASQEAGQEGATESAV 121
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
LI E MLEKD+ DN++IG +GAQ L++ + P ++ VLTHCNTGSLATA YGTA
Sbjct: 122 RERLICWAEHMLEKDVKDNQSIGDHGAQHLLERVAPGGGQVTVLTHCNTGSLATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHALGRL 194
>gi|21357667|ref|NP_651868.1| CG11334, isoform B [Drosophila melanogaster]
gi|24651647|ref|NP_733430.1| CG11334, isoform A [Drosophila melanogaster]
gi|442622070|ref|NP_001263144.1| CG11334, isoform C [Drosophila melanogaster]
gi|74867947|sp|Q9V9X4.1|MTNA_DROME RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|7302052|gb|AAF57154.1| CG11334, isoform A [Drosophila melanogaster]
gi|7302053|gb|AAF57155.1| CG11334, isoform B [Drosophila melanogaster]
gi|16769926|gb|AAL28212.1| GH08894p [Drosophila melanogaster]
gi|220946662|gb|ACL85874.1| CG11334-PA [synthetic construct]
gi|440218112|gb|AGB96523.1| CG11334, isoform C [Drosophila melanogaster]
Length = 364
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 105/159 (66%), Gaps = 16/159 (10%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I + F + SL + + KL+YLVSARPTAVNMK AAD + + +E K A V +
Sbjct: 61 VEINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEAIDVTQM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-----------LNVLTHCNTG 249
K R + E+ML+KDI+DN+AIG NGAQA++ GV+K + VLTHCNTG
Sbjct: 121 KHRFLDATEAMLKKDIADNRAIGANGAQAILQ---GVAKAGKAPAGSTGSVRVLTHCNTG 177
Query: 250 SLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
SLATA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 178 SLATAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 103/193 (53%), Gaps = 59/193 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK V + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLEILDQLLLPGQSKYVVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I + F + +ELI L
Sbjct: 62 EINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEAIDVTQMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK--------LNVLTHCNTGSLAT 123
E+ML+KDI+DN+AIG NGAQA++ + K + VLTHCNTGSLAT
Sbjct: 122 HRFLDATEAMLKKDIADNRAIGANGAQAILQGVAKAGKAPAGSTGSVRVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSL 136
A YGTALGV+R L
Sbjct: 182 AGYGTALGVVRQL 194
>gi|195575310|ref|XP_002105622.1| GD16414 [Drosophila simulans]
gi|313471344|sp|B4QSM8.1|MTNA_DROSI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194201549|gb|EDX15125.1| GD16414 [Drosophila simulans]
Length = 364
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 103/156 (66%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I + F + SL + + KL+YLVSARPTAVNMK AAD + + +E K A+ V +
Sbjct: 61 VEINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEATDVTQM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK--------LNVLTHCNTGSLA 252
K R + E+ML+KDI+DN+AIG NGAQA++ K + VLTHCNTGSLA
Sbjct: 121 KHRFLDATEAMLKKDIADNRAIGANGAQAILQRVAKAGKTPAGSTGSVRVLTHCNTGSLA 180
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 TAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 103/193 (53%), Gaps = 59/193 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK V + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLEILDQLLLPGQSKYVVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I + F + +ELI L
Sbjct: 62 EINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEATDVTQMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK--------LNVLTHCNTGSLAT 123
E+ML+KDI+DN+AIG NGAQA++ + K + VLTHCNTGSLAT
Sbjct: 122 HRFLDATEAMLKKDIADNRAIGANGAQAILQRVAKAGKTPAGSTGSVRVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSL 136
A YGTALGV+R L
Sbjct: 182 AGYGTALGVVRQL 194
>gi|307172475|gb|EFN63924.1| Translation initiation factor eIF-2B subunit alpha/beta/delta-like
protein [Camponotus floridanus]
Length = 355
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 97/146 (66%), Gaps = 2/146 (1%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS--PVNTVKT 202
I K+F + + ++ KL+YLV+ARPTAVNMK+AAD +E S ++++K
Sbjct: 66 INHKEFKNKQAFFDFMKAKLNYLVTARPTAVNMKKAADEFIKLANELYNDSNYSLSSMKD 125
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
R++ E MLE D+ N AIG NGAQ ++ N + +LTHCNTGSLATA YGTALGV
Sbjct: 126 RIVNDFEGMLEIDVKVNMAIGNNGAQEILSKNASKDSIIILTHCNTGSLATAGYGTALGV 185
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSLH K+ YCTETRPYNQGAR
Sbjct: 186 IRSLHKMEKLIHVYCTETRPYNQGAR 211
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 104/197 (52%), Gaps = 54/197 (27%)
Query: 3 SLQSIIY--EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L++I + E++ L ILDQ LLP + + I +V+D ++AI M+VRGAPAIAIVGCL L
Sbjct: 2 TLEAIKWNREENKLVILDQTLLPDMTLYLHIKDVQDGWKAINMMKVRGAPAIAIVGCLSL 61
Query: 61 VVDI------KDKQ-FPD-----------------------NELIQL------------- 77
+I K+KQ F D +E I+L
Sbjct: 62 TSEIINHKEFKNKQAFFDFMKAKLNYLVTARPTAVNMKKAADEFIKLANELYNDSNYSLS 121
Query: 78 ---------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
E MLE D+ N AIG NGAQ ++ N + +LTHCNTGSLATA YGT
Sbjct: 122 SMKDRIVNDFEGMLEIDVKVNMAIGNNGAQEILSKNASKDSIIILTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLHGANKIVDI 145
ALGVIRSLH K++ +
Sbjct: 182 ALGVIRSLHKMEKLIHV 198
>gi|195341767|ref|XP_002037477.1| GM12085 [Drosophila sechellia]
gi|313471315|sp|B4I029.1|MTNA_DROSE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194131593|gb|EDW53636.1| GM12085 [Drosophila sechellia]
Length = 364
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I + F + SL + + KL+YLVSARPTAVNMK AAD + + +E K A V +
Sbjct: 61 VEINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEAIDVTQM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK--------LNVLTHCNTGSLA 252
K R + E+ML+KDI+DN+AIG NGAQA++ K + VLTHCNTGSLA
Sbjct: 121 KHRFLDATEAMLKKDIADNRAIGANGAQAILQRVAKAGKTTAGTTGSVRVLTHCNTGSLA 180
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 TAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 103/193 (53%), Gaps = 59/193 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK V + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLEILDQLLLPGQSKYVVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I + F + +ELI L
Sbjct: 62 EINPEDFENKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANELYKDEAIDVTQMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK--------LNVLTHCNTGSLAT 123
E+ML+KDI+DN+AIG NGAQA++ + K + VLTHCNTGSLAT
Sbjct: 122 HRFLDATEAMLKKDIADNRAIGANGAQAILQRVAKAGKTTAGTTGSVRVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSL 136
A YGTALGV+R L
Sbjct: 182 AGYGTALGVVRQL 194
>gi|115400868|ref|XP_001216022.1| hypothetical protein ATEG_07401 [Aspergillus terreus NIH2624]
gi|121735993|sp|Q0CFY3.1|MTNA_ASPTN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|114189963|gb|EAU31663.1| hypothetical protein ATEG_07401 [Aspergillus terreus NIH2624]
Length = 377
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/145 (53%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRL 204
DK P+ + ++ +V EKL YLVS+RPTAVN+ AA ++ +++ A+A TV T
Sbjct: 70 DKLSPEAEDVQTFVVEKLRYLVSSRPTAVNLSDAARKLEVVVAQSARAPGATGKTVATAF 129
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLN-PGVSKLNVLTHCNTGSLATAEYGTALGVI 263
IQ E ML KD+ DNK IG +GAQ ++ + G K VLTHCNTGSLAT+ YGTALGVI
Sbjct: 130 IQAAEEMLVKDVEDNKKIGEHGAQWILKNSLEGHGKATVLTHCNTGSLATSGYGTALGVI 189
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RSL A+ + AYCTETRPYNQG+R
Sbjct: 190 RSLASADSLQHAYCTETRPYNQGSR 214
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPR-VSKLNVLTHCNTGSLATAEYGTALGV 132
IQ E ML KD+ DNK IG +GAQ ++ + K VLTHCNTGSLAT+ YGTALGV
Sbjct: 129 FIQAAEEMLVKDVEDNKKIGEHGAQWILKNSLEGHGKATVLTHCNTGSLATSGYGTALGV 188
Query: 133 IRSLHGANKI 142
IRSL A+ +
Sbjct: 189 IRSLASADSL 198
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+LQ+I Y L I+DQL LPH K V I+N E+ + AIK M+VRGA
Sbjct: 2 TLQAIKYNNGDLAIIDQLQLPHVEKYVTIHNSEEGWHAIKDMRVRGA 48
>gi|395851008|ref|XP_003798062.1| PREDICTED: methylthioribose-1-phosphate isomerase [Otolemur
garnettii]
Length = 364
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 98/141 (69%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-DSVKSSLSEWAKASPVN-TVKTRLIQLI 208
P D+L +V +KL +LV+ARPTAVNM RAA D K + E A+ V+ R+I+
Sbjct: 70 PGLDALVAFVRDKLSFLVTARPTAVNMARAAQDLAKDAAQEAAREGATEEAVRERVIRYA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E ML+KD+ DN++IG GA L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 130 EDMLDKDLRDNRSIGDLGAHHLLERVAPSSGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQGAR
Sbjct: 190 NMGCLEHAFCTETRPYNQGAR 210
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 105/188 (55%), Gaps = 53/188 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLPH S +++V+ A++AI+SM+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPHQSCYKSVDSVDQAWEAIRSMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLDALVAFVRDKLSFLVTARPTAVNMARAAQDLAKDAAQEAAREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E ML+KD+ DN++IG GA L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRYAEDMLDKDLRDNRSIGDLGAHHLLERVAPSSGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLH 137
LGVIRSLH
Sbjct: 182 LGVIRSLH 189
>gi|332373116|gb|AEE61699.1| unknown [Dendroctonus ponderosae]
Length = 357
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 104/148 (70%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V++++ +F L + V KL+YLVS+RPTAVNMK AA+ + ++ +K V+ +
Sbjct: 63 VEMRNDKFESKKQLRQEVEGKLNYLVSSRPTAVNMKGAAEELIDLANQLSKDKSVSLEDM 122
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+ + I+ +LEKDI+DN++IG NGA+ ++ G S++ V+THCNTGSLATA YGTAL
Sbjct: 123 IHKFLLKIQHLLEKDITDNQSIGDNGAKEILSRVSGDSQVRVVTHCNTGSLATAGYGTAL 182
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRSLH ++ YCTETRPYNQGAR
Sbjct: 183 GVIRSLHAMKRLEHVYCTETRPYNQGAR 210
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 109/193 (56%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SL+SIIY++ ++L+ILDQLLLP +K V + VED ++ I MQVRGAPAIAIVGCL L
Sbjct: 2 SLKSIIYDQVTNNLEILDQLLLPGITKYVKVKGVEDGWKVINKMQVRGAPAIAIVGCLSL 61
Query: 61 VVDIKDKQFPD-----------------------------NELIQL-------------- 77
V++++ +F ELI L
Sbjct: 62 AVEMRNDKFESKKQLRQEVEGKLNYLVSSRPTAVNMKGAAEELIDLANQLSKDKSVSLED 121
Query: 78 --------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
I+ +LEKDI+DN++IG NGA+ ++ S++ V+THCNTGSLATA YGTA
Sbjct: 122 MIHKFLLKIQHLLEKDITDNQSIGDNGAKEILSRVSGDSQVRVVTHCNTGSLATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHAMKRL 194
>gi|195391148|ref|XP_002054225.1| GJ22917 [Drosophila virilis]
gi|313471316|sp|B4LWZ8.1|MTNA_DROVI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194152311|gb|EDW67745.1| GJ22917 [Drosophila virilis]
Length = 362
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 101/154 (65%), Gaps = 8/154 (5%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F SL + + KL+YLVSARPTAVNMK +AD + + +E K V +
Sbjct: 61 VEIYPEEFGSKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELTKDDNVTVEDM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALID------LNPGVSKLNVLTHCNTGSLATA 254
K R + E+MLEKDI+DN+AIG NGA+A+++ + VLTHCNTGSLATA
Sbjct: 121 KQRFLNATEAMLEKDIADNRAIGANGAKAILEHVAESASAAAAGPVRVLTHCNTGSLATA 180
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 GYGTALGVVRHLSELGKLEHVYCTETRPYNQGAR 214
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 105/197 (53%), Gaps = 57/197 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYQRGSLEILDQLLLPVVSKYLTVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +ELI L
Sbjct: 62 EIYPEEFGSKKSLRQEIEGKLNYLVSARPTAVNMKISADELITLANELTKDDNVTVEDMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALID------LNPRVSKLNVLTHCNTGSLATAE 125
E+MLEKDI+DN+AIG NGA+A+++ + VLTHCNTGSLATA
Sbjct: 122 QRFLNATEAMLEKDIADNRAIGANGAKAILEHVAESASAAAAGPVRVLTHCNTGSLATAG 181
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGV+R L K+
Sbjct: 182 YGTALGVVRHLSELGKL 198
>gi|350630885|gb|EHA19257.1| hypothetical protein ASPNIDRAFT_54270 [Aspergillus niger ATCC 1015]
Length = 382
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 97/135 (71%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLE 213
++ ++ +KLDYLVS+RPTAVN+ AA +++ S+ + S +V T LIQ E ML+
Sbjct: 79 VQAFIAKKLDYLVSSRPTAVNLADAARKLRAVASDHTQRPGSTGRSVATALIQAAEEMLK 138
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
KDI DNK IG++GAQ ++ G K VLTHCNTGSLAT+ YGTALGVIR+L A+ +
Sbjct: 139 KDIEDNKNIGKHGAQWIMANAAGKPKATVLTHCNTGSLATSGYGTALGVIRALASADNLN 198
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 199 HAYCTETRPYNQGSR 213
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 50/69 (72%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
LIQ E ML+KDI DNK IG++GAQ ++ K VLTHCNTGSLAT+ YGTALGVI
Sbjct: 129 LIQAAEEMLKKDIEDNKNIGKHGAQWIMANAAGKPKATVLTHCNTGSLATSGYGTALGVI 188
Query: 134 RSLHGANKI 142
R+L A+ +
Sbjct: 189 RALASADNL 197
>gi|307202374|gb|EFN81802.1| Translation initiation factor eIF-2B subunit alpha/beta/delta-like
protein [Harpegnathos saltator]
Length = 363
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/148 (54%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD---SVKSSLSEWAKASPVNTV 200
+I + D V KL+YLVSARPTAVNMK AAD ++ +SLSE K + +
Sbjct: 62 EILPENITDKKRFRHEVEGKLNYLVSARPTAVNMKTAADELITLVNSLSENDKVTACE-M 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K R I I +MLEKD++DN+AIG GA ++ P S + +LTHCNTGSLATA YGTAL
Sbjct: 121 KDRFINTIVAMLEKDVADNQAIGNYGADEILRSVPRDSFIRILTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRSL K+ YCTETRPYNQGAR
Sbjct: 181 GVIRSLRRRKKLDHVYCTETRPYNQGAR 208
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 102/191 (53%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I ++ L+ILDQ LLP T++ V IN VED + AI MQVRGAPAIAIVGCL L
Sbjct: 2 TLQAITWDNGRLEILDQTLLPETTRSVLINGVEDGWHAINKMQVRGAPAIAIVGCLSLAT 61
Query: 63 DIKDKQFPD-----------------------------NELIQLIES------------- 80
+I + D +ELI L+ S
Sbjct: 62 EILPENITDKKRFRHEVEGKLNYLVSARPTAVNMKTAADELITLVNSLSENDKVTACEMK 121
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
MLEKD++DN+AIG GA ++ PR S + +LTHCNTGSLATA YGTALG
Sbjct: 122 DRFINTIVAMLEKDVADNQAIGNYGADEILRSVPRDSFIRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSL K+
Sbjct: 182 VIRSLRRRKKL 192
>gi|125773381|ref|XP_001357949.1| GA10928 [Drosophila pseudoobscura pseudoobscura]
gi|121991956|sp|Q29BB3.1|MTNA_DROPS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|54637683|gb|EAL27085.1| GA10928 [Drosophila pseudoobscura pseudoobscura]
Length = 362
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 8/154 (5%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F SL + + KL+YLVSARPTAVNMK AAD + S ++ K V+ +
Sbjct: 61 VEIHPEEFDSKKSLRQELEGKLNYLVSARPTAVNMKMAADELLSLANDLTKDDNVDVAAM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NPGVSKLNVLTHCNTGSLATA 254
K R + E+ML+KDI+DN+AIG +GA+A++ L P + VLTHCNTGSLATA
Sbjct: 121 KQRFLNATEAMLKKDIADNRAIGAHGAKAILQLVAAAAGAPMAGPVRVLTHCNTGSLATA 180
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 GYGTALGVVRQLSELGKLEHVYCTETRPYNQGAR 214
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 105/197 (53%), Gaps = 57/197 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYTRGSLEILDQLLLPVQSKYLPVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +EL+ L
Sbjct: 62 EIHPEEFDSKKSLRQELEGKLNYLVSARPTAVNMKMAADELLSLANDLTKDDNVDVAAMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAE 125
E+ML+KDI+DN+AIG +GA+A++ L P + VLTHCNTGSLATA
Sbjct: 122 QRFLNATEAMLKKDIADNRAIGAHGAKAILQLVAAAAGAPMAGPVRVLTHCNTGSLATAG 181
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGV+R L K+
Sbjct: 182 YGTALGVVRQLSELGKL 198
>gi|345567412|gb|EGX50344.1| hypothetical protein AOL_s00076g108 [Arthrobotrys oligospora ATCC
24927]
Length = 374
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 1/138 (0%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
P + + ++ + +KLDYLV++RPTAVN+ A++ +KS + A +P KT I+ E
Sbjct: 67 PPSSNPKEEIHQKLDYLVTSRPTAVNLADASNKLKSLTNSVANETPEIVTKT-FIEAAEQ 125
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
ML +D+ DNKAIG +GAQ + + S + VLTHCNTGSLATA YGTALG+IRSLH
Sbjct: 126 MLTQDVEDNKAIGHHGAQWIQNAVGKTSDIKVLTHCNTGSLATASYGTALGIIRSLHSDT 185
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 186 SLSHAYCTETRPYNQGSR 203
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 95/181 (52%), Gaps = 46/181 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I Y + +L ILDQL LPH S + + +V A+ AIK+MQVRGAPAIAIV L L V
Sbjct: 2 ALQAIKYTRGTLSILDQLFLPHQSIYISVPDVTTAWNAIKTMQVRGAPAIAIVAVLSLAV 61
Query: 63 DIKDKQFPDNE----------------------------------------------LIQ 76
++ + N I+
Sbjct: 62 ELHNNPPSSNPKEEIHQKLDYLVTSRPTAVNLADASNKLKSLTNSVANETPEIVTKTFIE 121
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E ML +D+ DNKAIG +GAQ + + + S + VLTHCNTGSLATA YGTALG+IRSL
Sbjct: 122 AAEQMLTQDVEDNKAIGHHGAQWIQNAVGKTSDIKVLTHCNTGSLATASYGTALGIIRSL 181
Query: 137 H 137
H
Sbjct: 182 H 182
>gi|194904902|ref|XP_001981082.1| GG11866 [Drosophila erecta]
gi|313471311|sp|B3P538.1|MTNA_DROER RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|190655720|gb|EDV52952.1| GG11866 [Drosophila erecta]
Length = 364
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 103/156 (66%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTV 200
V+I + F SL + V KL+YLVSARPTAVNMK AAD + + ++ K A VN +
Sbjct: 61 VEINPEDFETKKSLRQEVEGKLNYLVSARPTAVNMKIAADELITLANDLYKDEAIDVNGM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NPGVS--KLNVLTHCNTGSLA 252
K R + E+ML+KDI+DN+AIG NGA+A++ P S + VLTHCNTGSLA
Sbjct: 121 KQRFLDATEAMLKKDIADNRAIGANGAKAILQRVAEKGGAPAGSTGSVRVLTHCNTGSLA 180
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 TAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 103/196 (52%), Gaps = 65/196 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLEILDQLLLPGQSKYEVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I + F +ELI L
Sbjct: 62 EINPEDFETKKSLRQEVEGKLNYLVSARPTAVNMKIAADELITLANDLYKDEAIDVNGMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK-----------LNVLTHCNTGS 120
E+ML+KDI+DN+AIG NGA+A++ RV++ + VLTHCNTGS
Sbjct: 122 QRFLDATEAMLKKDIADNRAIGANGAKAILQ---RVAEKGGAPAGSTGSVRVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSL 136
LATA YGTALGV+R L
Sbjct: 179 LATAGYGTALGVVRQL 194
>gi|195165860|ref|XP_002023756.1| GL27236 [Drosophila persimilis]
gi|313471314|sp|B4GYU1.1|MTNA_DROPE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194105916|gb|EDW27959.1| GL27236 [Drosophila persimilis]
Length = 362
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 103/154 (66%), Gaps = 8/154 (5%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F SL + + KL+YLVSARPTAVNMK AAD + S ++ K V+ +
Sbjct: 61 VEIHPEEFDSKKSLRQELEGKLNYLVSARPTAVNMKMAADELLSLANDLTKDDNVDVAAM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NPGVSKLNVLTHCNTGSLATA 254
K R + E+ML+KDI+DN+AIG +GA+A++ L P + VLTHCNTGSLATA
Sbjct: 121 KQRFLNATEAMLKKDIADNRAIGAHGAKAILQLVAAAAGAPMAGPVRVLTHCNTGSLATA 180
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 GYGTALGVVRQLSELGKLEHIYCTETRPYNQGAR 214
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 106/200 (53%), Gaps = 57/200 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYTRGSLEILDQLLLPVQSKYLPVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +EL+ L
Sbjct: 62 EIHPEEFDSKKSLRQELEGKLNYLVSARPTAVNMKMAADELLSLANDLTKDDNVDVAAMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAE 125
E+ML+KDI+DN+AIG +GA+A++ L P + VLTHCNTGSLATA
Sbjct: 122 QRFLNATEAMLKKDIADNRAIGAHGAKAILQLVAAAAGAPMAGPVRVLTHCNTGSLATAG 181
Query: 126 YGTALGVIRSLHGANKIVDI 145
YGTALGV+R L K+ I
Sbjct: 182 YGTALGVVRQLSELGKLEHI 201
>gi|289742017|gb|ADD19756.1| putative translation initiation factor [Glossina morsitans
morsitans]
Length = 356
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 98/148 (66%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I + + +L + + KL+YLVSARPTAVNMK AAD + + ++ K +N +
Sbjct: 61 VEIFPESYDSKKTLRQEIEGKLNYLVSARPTAVNMKIAADELIALANDLTKDDSINVDQM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K R + E+ML+KDI DN+AIG NGA ++ + +LTHCNTGSLATA YGTAL
Sbjct: 121 KERFLAATEAMLQKDIDDNRAIGANGASIILKNLKKEGPVRILTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+R LH K+ YCTETRPYNQGAR
Sbjct: 181 GVVRKLHELKKLEHVYCTETRPYNQGAR 208
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 100/194 (51%), Gaps = 59/194 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQS+ Y L+ILDQLLLP SK + + VED ++AI MQVRGAPAIAIVGCL L V+
Sbjct: 3 LQSVKYAPGKLEILDQLLLPVQSKYLAVKGVEDGWKAINKMQVRGAPAIAIVGCLSLAVE 62
Query: 64 IKDKQFPD---------------------------------NELIQL------------- 77
I FP+ +ELI L
Sbjct: 63 I----FPESYDSKKTLRQEIEGKLNYLVSARPTAVNMKIAADELIALANDLTKDDSINVD 118
Query: 78 ---------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
E+ML+KDI DN+AIG NGA ++ + + +LTHCNTGSLATA YGT
Sbjct: 119 QMKERFLAATEAMLQKDIDDNRAIGANGASIILKNLKKEGPVRILTHCNTGSLATAGYGT 178
Query: 129 ALGVIRSLHGANKI 142
ALGV+R LH K+
Sbjct: 179 ALGVVRKLHELKKL 192
>gi|147905530|ref|NP_001090076.1| methylthioribose-1-phosphate isomerase [Xenopus laevis]
gi|123903944|sp|Q4FZP2.1|MTNA_XENLA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|71051875|gb|AAH99301.1| MGC116493 protein [Xenopus laevis]
Length = 354
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTV 200
V++ K D SL +V E L +LVSARPTAVNMK+AAD + + L+E A + +
Sbjct: 61 VELTTKPCQDVPSLITFVRESLHHLVSARPTAVNMKKAADELNAFLAEEADKPGATSQRL 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
++Q ES+L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTAL
Sbjct: 121 TESVVQWAESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+RSLH ++ +CTETRPYNQG+R
Sbjct: 181 GVVRSLHALGRLSHVFCTETRPYNQGSR 208
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 99/191 (51%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+S+ Y + SL++L+QLLLPH S+ + V+ AI++M+VRGAPAIAIVG L L V
Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAV 61
Query: 63 DIKDKQFPD--------------------------------------------------- 71
++ K D
Sbjct: 62 ELTTKPCQDVPSLITFVRESLHHLVSARPTAVNMKKAADELNAFLAEEADKPGATSQRLT 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++Q ES+L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTALG
Sbjct: 122 ESVVQWAESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
V+RSLH ++
Sbjct: 182 VVRSLHALGRL 192
>gi|348536646|ref|XP_003455807.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Oreochromis
niloticus]
Length = 353
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 109/187 (58%), Gaps = 48/187 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+IL+QLLLPH + DI +V+DAY+AIKSM+VRGAPAIAIVGCL L V
Sbjct: 2 TLEAIRYRTGSLQILNQLLLPHQTVYDDIRSVQDAYEAIKSMKVRGAPAIAIVGCLSLAV 61
Query: 63 DIKD-----------------------------------KQFPDNE------------LI 75
+++ +F +NE +I
Sbjct: 62 ELRAGAGGDDPVTFIRESLCHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVI 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
IE MLE+D++DN+ IG GAQ ++ PR S + +LTHCNTGSLATA YGTALGV+RS
Sbjct: 122 AWIEDMLERDVNDNRKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRS 180
Query: 136 LHGANKI 142
LH ++
Sbjct: 181 LHALGRL 187
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ E L +L SARPTAVNM RAA + + ++ +I IE MLE+D++D
Sbjct: 75 FIRESLCHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVIAWIEDMLERDVND 134
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
N+ IG GAQ ++ P S + +LTHCNTGSLATA YGTALGV+RSLH ++ YCT
Sbjct: 135 NRKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRSLHALGRLKRVYCT 193
Query: 279 ETRPYNQGAR 288
ETRPYNQG+R
Sbjct: 194 ETRPYNQGSR 203
>gi|195505456|ref|XP_002099512.1| GE23315 [Drosophila yakuba]
gi|313471318|sp|B4PNE2.1|MTNA_DROYA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|194185613|gb|EDW99224.1| GE23315 [Drosophila yakuba]
Length = 364
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I + F SL + + KL+YLVSARPTAVNMK AAD + + ++ K +N +
Sbjct: 61 VEINPEDFETKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANDLYKDEAINVTEM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALID------LNPGVS--KLNVLTHCNTGSLA 252
K R + E+ML+KDI+DN+AIG NGA+A++ P S + VLTHCNTGSLA
Sbjct: 121 KQRFLDATEAMLKKDIADNRAIGANGAKAILQRVAETGAAPAGSTGSVRVLTHCNTGSLA 180
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 TAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 104/196 (53%), Gaps = 65/196 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL+ILDQLLLP SK + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLEILDQLLLPGQSKYLVVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I + F +ELI L
Sbjct: 62 EINPEDFETKKSLRQEIEGKLNYLVSARPTAVNMKIAADELITLANDLYKDEAINVTEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK-----------LNVLTHCNTGS 120
E+ML+KDI+DN+AIG NGA+A++ RV++ + VLTHCNTGS
Sbjct: 122 QRFLDATEAMLKKDIADNRAIGANGAKAILQ---RVAETGAAPAGSTGSVRVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSL 136
LATA YGTALGV+R L
Sbjct: 179 LATAGYGTALGVVRQL 194
>gi|195996173|ref|XP_002107955.1| hypothetical protein TRIADDRAFT_19292 [Trichoplax adhaerens]
gi|313471366|sp|B3RLE6.1|MTNA_TRIAD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|190588731|gb|EDV28753.1| hypothetical protein TRIADDRAFT_19292 [Trichoplax adhaerens]
Length = 360
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 97/148 (65%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTV 200
V+++ K F + + +K++ + L++L +ARPTAVN+ A D + + V
Sbjct: 67 VELRSKSFTEMNEFDKFIRDSLEHLKTARPTAVNIFLACDLITKLIDNLIILGDEAVGVA 126
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K +I+ IE ML KD+ NK IG GA+A++ P K+NVLTHCNTGSLATA YGTAL
Sbjct: 127 KIEVIRHIEEMLHKDVESNKRIGSYGAEAILAKVPSKEKINVLTHCNTGSLATAGYGTAL 186
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRSL+G + I +CTETRPYNQG+R
Sbjct: 187 GVIRSLYGRDSIDRVFCTETRPYNQGSR 214
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 104/194 (53%), Gaps = 53/194 (27%)
Query: 2 KSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
+SL++I Y+ LKIL+QLLLP ++ +ED +QAI+ M+VRGAPAIAIVG L
Sbjct: 5 QSLEAIRYDHDHGQLKILNQLLLPSEYVYENVEGIEDGWQAIRQMKVRGAPAIAIVGMLS 64
Query: 60 LVVDIKDKQFP-------------------------------------DN---------- 72
L V+++ K F DN
Sbjct: 65 LAVELRSKSFTEMNEFDKFIRDSLEHLKTARPTAVNIFLACDLITKLIDNLIILGDEAVG 124
Query: 73 ----ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
E+I+ IE ML KD+ NK IG GA+A++ P K+NVLTHCNTGSLATA YGT
Sbjct: 125 VAKIEVIRHIEEMLHKDVESNKRIGSYGAEAILAKVPSKEKINVLTHCNTGSLATAGYGT 184
Query: 129 ALGVIRSLHGANKI 142
ALGVIRSL+G + I
Sbjct: 185 ALGVIRSLYGRDSI 198
>gi|112983334|ref|NP_001037650.1| methylthioribose-1-phosphate isomerase [Bombyx mori]
gi|122066488|sp|Q0ZB81.1|MTNA_BOMMO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|110174953|gb|ABG54283.1| eIF2B-alpha-like protein [Bombyx mori]
Length = 364
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 97/144 (67%), Gaps = 6/144 (4%)
Query: 151 PDNDSLEKYVGE----KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--VKTRL 204
PDN+S +K + + KL+YLVSARPTAVN+K AAD + + + ++ K R
Sbjct: 65 PDNESSKKNMRQEIEGKLNYLVSARPTAVNIKLAADELINLANTLCADDSISAEIFKERF 124
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
I IE ML KDI DNKAIG G +A++ G S + VLTHCNTGSLATA YGTALGVIR
Sbjct: 125 IGSIEDMLTKDIHDNKAIGSLGCEAILKNIDGDSPVRVLTHCNTGSLATAGYGTALGVIR 184
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
SLH ++ +CTETRPYNQGAR
Sbjct: 185 SLHATKRLEHVFCTETRPYNQGAR 208
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 101/195 (51%), Gaps = 59/195 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+SI Y + SL+ILDQLLLP ++ + + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLESIKYTRGSLEILDQLLLPLQTRYIKVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPDN---------------------------------ELIQL------------ 77
++ PDN ELI L
Sbjct: 62 ELS----PDNESSKKNMRQEIEGKLNYLVSARPTAVNIKLAADELINLANTLCADDSISA 117
Query: 78 ----------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYG 127
IE ML KDI DNKAIG G +A++ S + VLTHCNTGSLATA YG
Sbjct: 118 EIFKERFIGSIEDMLTKDIHDNKAIGSLGCEAILKNIDGDSPVRVLTHCNTGSLATAGYG 177
Query: 128 TALGVIRSLHGANKI 142
TALGVIRSLH ++
Sbjct: 178 TALGVIRSLHATKRL 192
>gi|410917207|ref|XP_003972078.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Takifugu
rubripes]
Length = 353
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 109/187 (58%), Gaps = 48/187 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+IL+QLLLPH + D+ +V+DAY+AIKSM+VRGAPAIAIVGCL L V
Sbjct: 2 TLEAIRYRAGSLQILNQLLLPHQTVYDDLRSVQDAYEAIKSMKVRGAPAIAIVGCLSLAV 61
Query: 63 DIKD-----------------------------------KQFPDNE------------LI 75
+++ +F +NE +I
Sbjct: 62 ELRAGAGGDDPVNFIRESLYHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVI 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
IE MLE+D++DNK IG GAQ ++ PR S + +LTHCNTGSLATA YGTALGV+RS
Sbjct: 122 AWIEDMLERDVNDNKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRS 180
Query: 136 LHGANKI 142
LH ++
Sbjct: 181 LHALARL 187
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ E L +L SARPTAVNM RAA + + ++ +I IE MLE+D++D
Sbjct: 75 FIRESLYHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVIAWIEDMLERDVND 134
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
NK IG GAQ ++ P S + +LTHCNTGSLATA YGTALGV+RSLH ++ YCT
Sbjct: 135 NKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRSLHALARLKRVYCT 193
Query: 279 ETRPYNQGAR 288
ETRPYNQG+R
Sbjct: 194 ETRPYNQGSR 203
>gi|194741994|ref|XP_001953494.1| GF17194 [Drosophila ananassae]
gi|313471310|sp|B3M098.1|MTNA_DROAN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|190626531|gb|EDV42055.1| GF17194 [Drosophila ananassae]
Length = 364
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 102/156 (65%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+I ++F L + V KL+YLVSARPTAVNMK AAD + + ++ K ++ +
Sbjct: 61 VEIYPEEFESKKRLRQEVEGKLNYLVSARPTAVNMKIAADELLALANDLTKDETIDVAGM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALID-------LNPGVS-KLNVLTHCNTGSLA 252
K R + E+MLEKDI+DN+AIG +GAQA++ G + + VLTHCNTGSLA
Sbjct: 121 KERFLNATEAMLEKDIADNQAIGSHGAQAILKRVAEAAGAQTGTAGPVRVLTHCNTGSLA 180
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R L K+ YCTETRPYNQGAR
Sbjct: 181 TAGYGTALGVVRQLAELGKLEHVYCTETRPYNQGAR 216
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 104/196 (53%), Gaps = 65/196 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y + SL ILDQLLLP SK V + VED ++ I MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQSIKYSRGSLDILDQLLLPVQSKYVAVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQL---------------- 77
+I ++F +EL+ L
Sbjct: 62 EIYPEEFESKKRLRQEVEGKLNYLVSARPTAVNMKIAADELLALANDLTKDETIDVAGMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSK-----------LNVLTHCNTGS 120
E+MLEKDI+DN+AIG +GAQA++ RV++ + VLTHCNTGS
Sbjct: 122 ERFLNATEAMLEKDIADNQAIGSHGAQAILK---RVAEAAGAQTGTAGPVRVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSL 136
LATA YGTALGV+R L
Sbjct: 179 LATAGYGTALGVVRQL 194
>gi|355704260|gb|AES02170.1| methylthioribose-1-phosphate isomerase-like protein [Mustela
putorius furo]
Length = 251
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 96/137 (70%), Gaps = 3/137 (2%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSV--KSSLSEWAKASPVNTVKTRLIQLIESML 212
+L +V + L +LV+ARPTAVNM RAA + ++L + + V+ R+I+ E ML
Sbjct: 1 ALVAFVRDALSFLVTARPTAVNMARAARHLVETAALEAEREGATEEAVRERVIRCAEDML 60
Query: 213 EKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
EKD+ DN++IG GA L++ PG K+ VLTHCNTG+LATA YGTALGVIRSLH +
Sbjct: 61 EKDLKDNRSIGDLGAHHLLERAAPGGGKVTVLTHCNTGALATAGYGTALGVIRSLHTLGR 120
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQGAR
Sbjct: 121 LDHAFCTETRPYNQGAR 137
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+I+ E MLEKD+ DN++IG GA L++ P K+ VLTHCNTG+LATA YGTALGV
Sbjct: 52 VIRCAEDMLEKDLKDNRSIGDLGAHHLLERAAPGGGKVTVLTHCNTGALATAGYGTALGV 111
Query: 133 IRSLH 137
IRSLH
Sbjct: 112 IRSLH 116
>gi|345312499|ref|XP_001510432.2| PREDICTED: methylthioribose-1-phosphate isomerase-like
[Ornithorhynchus anatinus]
Length = 324
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 11/145 (7%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK------ASPVNTVKTRL 204
P +L +V E L YLV+ARPTAVNM RAA LS++A+ + ++V+ +
Sbjct: 36 PGLQALVAFVQESLRYLVTARPTAVNMARAA----RELSDFAEREAGRHGATEDSVRESV 91
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
I+ E+MLEKD+ DN+ IG +GA+ +++ P K+ VLTHCNTGSLATA YGTALGVI
Sbjct: 92 IRWAENMLEKDVGDNRKIGDHGARHILERAAPTGGKVTVLTHCNTGSLATAGYGTALGVI 151
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RSLH ++ YCTETRPYNQGAR
Sbjct: 152 RSLHSLGRLDHVYCTETRPYNQGAR 176
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 76/153 (49%), Gaps = 53/153 (34%)
Query: 43 SMQVRGAPAIAIVGCLGLVVDIKD------------------------------------ 66
+ QVRGAPAIAIVGCL L V+++
Sbjct: 8 ATQVRGAPAIAIVGCLSLAVELRAGGGGPGLQALVAFVQESLRYLVTARPTAVNMARAAR 67
Query: 67 --KQFPDNE--------------LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSK 109
F + E +I+ E+MLEKD+ DN+ IG +GA+ +++ P K
Sbjct: 68 ELSDFAEREAGRHGATEDSVRESVIRWAENMLEKDVGDNRKIGDHGARHILERAAPTGGK 127
Query: 110 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+ VLTHCNTGSLATA YGTALGVIRSLH ++
Sbjct: 128 VTVLTHCNTGSLATAGYGTALGVIRSLHSLGRL 160
>gi|311248954|ref|XP_003123394.1| PREDICTED: methylthioribose-1-phosphate isomerase [Sus scrofa]
Length = 358
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLI 208
P SL +V + L +LV+ARPTAVNM RAA + ++ A+ + V+ R+I
Sbjct: 70 PGLSSLVAFVRDALSFLVTARPTAVNMARAARDLTDVAAQEAEREGATEEAVRERVISWA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKD+SDN++IG GA+ L++ P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 130 EDMLEKDLSDNRSIGDLGARHLLERAAPQGGKVIVLTHCNTGALATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQGAR
Sbjct: 190 SLGRLEHAFCTETRPYNQGAR 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 ----------------------------------------DIKDKQFPDNE--------- 73
D+ D + E
Sbjct: 62 ELQAGAGGPGLSSLVAFVRDALSFLVTARPTAVNMARAARDLTDVAAQEAEREGATEEAV 121
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E MLEKD+SDN++IG GA+ L++ P+ K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVISWAEDMLEKDLSDNRSIGDLGARHLLERAAPQGGKVIVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|156408602|ref|XP_001641945.1| predicted protein [Nematostella vectensis]
gi|313471325|sp|A7RF00.1|MTNA_NEMVE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|156229086|gb|EDO49882.1| predicted protein [Nematostella vectensis]
Length = 350
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR 203
+I K F ++ L ++V +KL YL +ARPTAVNM A + + +++ K SP + +K +
Sbjct: 62 EIYSKPFASSEELAEFVKQKLQYLNTARPTAVNMTNAVIELTAFVADLTKCSPKD-MKQK 120
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
L+ IE ML +DI+ NKAIG+ GA++++ G + +LTHCNTGSLATA YGT LGVI
Sbjct: 121 LLSKIEGMLSEDIAQNKAIGKFGAESILGAVGG--PVRMLTHCNTGSLATAGYGTGLGVI 178
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RS+H ++ YCTETRPYNQG+R
Sbjct: 179 RSIHEMKQLEHVYCTETRPYNQGSR 203
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 98/183 (53%), Gaps = 50/183 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I Y+K L+IL+QLLLPH S +++ ED ++AI+ M+VRGAPAIAIVG L L
Sbjct: 2 SLEAIKYKKGRLEILNQLLLPHESTYEVVSDTEDGWKAIREMKVRGAPAIAIVGALSLAA 61
Query: 63 DIKDKQFPDNE------------------------------------------------L 74
+I K F +E L
Sbjct: 62 EIYSKPFASSEELAEFVKQKLQYLNTARPTAVNMTNAVIELTAFVADLTKCSPKDMKQKL 121
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ IE ML +DI+ NKAIG+ GA+++ L + +LTHCNTGSLATA YGT LGVIR
Sbjct: 122 LSKIEGMLSEDIAQNKAIGKFGAESI--LGAVGGPVRMLTHCNTGSLATAGYGTGLGVIR 179
Query: 135 SLH 137
S+H
Sbjct: 180 SIH 182
>gi|301771260|ref|XP_002921063.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase-like [Ailuropoda melanoleuca]
Length = 362
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 95/136 (69%), Gaps = 3/136 (2%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSV--KSSLSEWAKASPVNTVKTRLIQLIESMLE 213
L +V + L +LV+ARPTAVNM RAA + ++L + + V+ R+I+ E MLE
Sbjct: 79 LVAFVRDALSFLVTARPTAVNMARAARHLAETAALEAEREGATEEAVRERVIRCAEDMLE 138
Query: 214 KDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
KD+ DN++IG GA L++ PG K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 139 KDLKDNRSIGDLGALHLLERAAPGGGKVTVLTHCNTGALATAGYGTALGVIRSLHALGRL 198
Query: 273 GAAYCTETRPYNQGAR 288
A+CTETRPYNQGAR
Sbjct: 199 DHAFCTETRPYNQGAR 214
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 103/197 (52%), Gaps = 57/197 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG--- 59
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL
Sbjct: 2 ALEAIRYSRGSLEILDQLLLPQHSRYEPVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 60 -----------------LVVDIKD------------------------------------ 66
LV ++D
Sbjct: 62 ELQAGAGGGARXPGPAALVAFVRDALSFLVTARPTAVNMARAARHLAETAALEAEREGAT 121
Query: 67 KQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAE 125
++ +I+ E MLEKD+ DN++IG GA L++ P K+ VLTHCNTG+LATA
Sbjct: 122 EEAVRERVIRCAEDMLEKDLKDNRSIGDLGALHLLERAAPGGGKVTVLTHCNTGALATAG 181
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGVIRSLH ++
Sbjct: 182 YGTALGVIRSLHALGRL 198
>gi|389612723|dbj|BAM19778.1| translation initiation factor eif-2b, partial [Papilio xuthus]
Length = 215
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 93/129 (72%), Gaps = 4/129 (3%)
Query: 163 KLDYLVSARPTAVNMKRAAD---SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
KL+YLVSA PTAVN+K AA+ ++ ++LS S + K R I IESML KDI DN
Sbjct: 8 KLNYLVSAXPTAVNIKLAAEELINLANTLSADENVS-XXSFKERFITCIESMLVKDIEDN 66
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
KAIG+ G +A++ G S + VLTHC TGSLATA YGTALGVIRSLH ++++ YCTE
Sbjct: 67 KAIGKFGCEAILKQLEGDSXVRVLTHCXTGSLATAGYGTALGVIRSLHKSSRLEHVYCTE 126
Query: 280 TRPYNQGAR 288
TRPYNQGAR
Sbjct: 127 TRPYNQGAR 135
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 51/69 (73%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I IESML KDI DNKAIG+ G +A++ S + VLTHC TGSLATA YGTALGVI
Sbjct: 51 FITCIESMLVKDIEDNKAIGKFGCEAILKQLEGDSXVRVLTHCXTGSLATAGYGTALGVI 110
Query: 134 RSLHGANKI 142
RSLH ++++
Sbjct: 111 RSLHKSSRL 119
>gi|327267177|ref|XP_003218379.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Anolis
carolinensis]
Length = 359
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 97/137 (70%), Gaps = 3/137 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESM 211
D+LE +V + L YLVSARPTAVNM +AA + + + AK S V +++ ++I E+M
Sbjct: 74 DNLETFVLDSLSYLVSARPTAVNMAQAAQELGRIVRQEAKREGSTVESLREKVICWAEAM 133
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L++D+ DN++IG +GA L+ G K+ VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 134 LDQDLKDNRSIGDHGALHLLQ-QVGQDKVIVLTHCNTGSLATAGYGTALGVIRSLHTMGC 192
Query: 272 IGAAYCTETRPYNQGAR 288
+ YCTETRPYNQGAR
Sbjct: 193 LEHVYCTETRPYNQGAR 209
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 102/188 (54%), Gaps = 54/188 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I Y + SL+IL+QLLLP S + +V ++AI+SM+VRGAPAIAI+GCL L V
Sbjct: 2 SLEAIRYRRGSLEILNQLLLPQQSLYEAVGSVRQGWEAIRSMKVRGAPAIAIIGCLSLAV 61
Query: 63 DIKD----KQFPDN---------------------------------------------- 72
++ + ++ DN
Sbjct: 62 ELHNKTTTEESVDNLETFVLDSLSYLVSARPTAVNMAQAAQELGRIVRQEAKREGSTVES 121
Query: 73 ---ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
++I E+ML++D+ DN++IG +GA L+ + K+ VLTHCNTGSLATA YGTA
Sbjct: 122 LREKVICWAEAMLDQDLKDNRSIGDHGALHLLQQVGQ-DKVIVLTHCNTGSLATAGYGTA 180
Query: 130 LGVIRSLH 137
LGVIRSLH
Sbjct: 181 LGVIRSLH 188
>gi|58219514|ref|NP_001010947.1| methylthioribose-1-phosphate isomerase [Rattus norvegicus]
gi|81882932|sp|Q5HZE4.1|MTNA_RAT RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|57870423|gb|AAH89060.1| Translation initiation factor eIF-2B subunit alpha/beta/delta-like
protein [Rattus norvegicus]
gi|149037867|gb|EDL92227.1| similar to hypothetical protein MGC3207, isoform CRA_a [Rattus
norvegicus]
Length = 369
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V ++L LV+ARPTAVNM RAA + + A+ + TV+ R+I+ E MLEKD+
Sbjct: 78 FVRDQLSLLVAARPTAVNMARAARDLTHMAAREAELEGATEETVRERVIRFAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ NP K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 138 KDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHT 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 103/192 (53%), Gaps = 53/192 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y SL+ILDQL LP +++V+ A +AI++M+VRGAPAIA+VGCL L V+
Sbjct: 3 LEAIRYSPGSLQILDQLQLPEHCHYETLSSVQQAREAIRAMKVRGAPAIALVGCLSLAVE 62
Query: 64 ----------------IKDK------------------------------------QFPD 71
++D+ +
Sbjct: 63 LQAGAGGPGLAALVAFVRDQLSLLVAARPTAVNMARAARDLTHMAAREAELEGATEETVR 122
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTAL 130
+I+ E MLEKD+ DN++IG GA+ L++ NPR K+ VLTHCNTG+LATA YGTAL
Sbjct: 123 ERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTAL 182
Query: 131 GVIRSLHGANKI 142
GVIRSLH ++
Sbjct: 183 GVIRSLHEMGRL 194
>gi|358373523|dbj|GAA90121.1| translation initiation factor [Aspergillus kawachii IFO 4308]
Length = 340
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLE 213
++ ++ +KLDYLVS+RPTAVN+ AA +++ S+ + S +V T LIQ E ML
Sbjct: 37 VQAFIMDKLDYLVSSRPTAVNLADAARKLRAVASDHTQRPGSTGRSVATALIQAAEEMLV 96
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
KDI DNK IG++GAQ ++ G K VLTHCNTGSLAT+ YGTALGVIR+L + +
Sbjct: 97 KDIEDNKNIGKHGAQWIMANAVGKPKATVLTHCNTGSLATSGYGTALGVIRALASTDNLN 156
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 157 RAYCTETRPYNQGSR 171
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 46/63 (73%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
LIQ E ML KDI DNK IG++GAQ ++ K VLTHCNTGSLAT+ YGTALGVI
Sbjct: 87 LIQAAEEMLVKDIEDNKNIGKHGAQWIMANAVGKPKATVLTHCNTGSLATSGYGTALGVI 146
Query: 134 RSL 136
R+L
Sbjct: 147 RAL 149
>gi|332026277|gb|EGI66416.1| Methylthioribose-1-phosphate isomerase [Acromyrmex echinatior]
Length = 362
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 107/163 (65%), Gaps = 6/163 (3%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+ ++ SL A +I ++ + D L + + + ++YLV+ARPTAVNMK AA+ + +
Sbjct: 52 AIAIVGSLSVAVEI--LQHPNYDDKKVLSRAIKDNMNYLVTARPTAVNMKVAANFF-TEI 108
Query: 189 SEWAKAS---PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+++ +S ++ +K I I+ ML DI DNKAIG+ GA ++ P S + VLTH
Sbjct: 109 ADYLSSSDEFTLSQMKDEFIDRIDKMLMDDIKDNKAIGKFGADEILRNVPEGSSVRVLTH 168
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTGSLATA YGTALGVIRSLH ++ YCTETRPYNQGAR
Sbjct: 169 CNTGSLATAGYGTALGVIRSLHEMGRLEHVYCTETRPYNQGAR 211
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 97/194 (50%), Gaps = 54/194 (27%)
Query: 3 SLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+LQ+I + K L+ILDQ LLP T+ + + V+D + I MQVRGAPAIAIVG L +
Sbjct: 2 TLQAIKWSKTDGKLEILDQTLLPATTSYIQVKGVKDGWNVINKMQVRGAPAIAIVGSLSV 61
Query: 61 VVDI------KDKQ-----FPDN------------------------------------- 72
V+I DK+ DN
Sbjct: 62 AVEILQHPNYDDKKVLSRAIKDNMNYLVTARPTAVNMKVAANFFTEIADYLSSSDEFTLS 121
Query: 73 ----ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
E I I+ ML DI DNKAIG+ GA ++ P S + VLTHCNTGSLATA YGT
Sbjct: 122 QMKDEFIDRIDKMLMDDIKDNKAIGKFGADEILRNVPEGSSVRVLTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLHGANKI 142
ALGVIRSLH ++
Sbjct: 182 ALGVIRSLHEMGRL 195
>gi|354479557|ref|XP_003501976.1| PREDICTED: methylthioribose-1-phosphate isomerase [Cricetulus
griseus]
gi|344244526|gb|EGW00630.1| Methylthioribose-1-phosphate isomerase [Cricetulus griseus]
Length = 369
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 96/141 (68%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLI 208
P SL +V +L LV+ARPTAVNM RAA + ++ A+ + TV+ R+I L
Sbjct: 70 PGLASLVAFVQNQLRLLVAARPTAVNMARAARDLARVAAQEAEREGATEETVRERVIGLA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKD+ DN+ IG GA+ L++ NP K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 130 EDMLEKDLRDNRNIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ +CTETRPYNQGAR
Sbjct: 190 EMGQLEHTFCTETRPYNQGAR 210
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 100/187 (53%), Gaps = 53/187 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y SL+ILDQL LP + + +V+ A +AI++M+VRGAPAIA+VGCL L V+
Sbjct: 3 LEAIRYSPGSLQILDQLQLPEHCRYEALGSVQQAREAIRAMKVRGAPAIALVGCLSLAVE 62
Query: 64 IKDKQ----------FPDNEL--------------------------------------- 74
++ F N+L
Sbjct: 63 LRAGAGGPGLASLVAFVQNQLRLLVAARPTAVNMARAARDLARVAAQEAEREGATEETVR 122
Query: 75 ---IQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTAL 130
I L E MLEKD+ DN+ IG GA+ L++ NPR K+ VLTHCNTG+LATA YGTAL
Sbjct: 123 ERVIGLAEDMLEKDLRDNRNIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTAL 182
Query: 131 GVIRSLH 137
GVIRSLH
Sbjct: 183 GVIRSLH 189
>gi|268838020|ref|NP_080699.3| methylthioribose-1-phosphate isomerase [Mus musculus]
gi|81903589|sp|Q9CQT1.1|MTNA_MOUSE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|12846058|dbj|BAB27014.1| unnamed protein product [Mus musculus]
gi|12851419|dbj|BAB29034.1| unnamed protein product [Mus musculus]
gi|19264018|gb|AAH25049.1| Methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) [Mus
musculus]
gi|74227912|dbj|BAE37957.1| unnamed protein product [Mus musculus]
gi|148678994|gb|EDL10941.1| RIKEN cDNA 2410018C20, isoform CRA_b [Mus musculus]
Length = 369
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V ++L LV+ARPTAVNM RAA + ++ A+ + TV+ R+I+ E MLEKD+
Sbjct: 78 FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ NP K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 138 KDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLHEMGRLEHT 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 106/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+ILDQL LP +++V+ A +AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK--------------------------QFPDNE------- 73
+ ++D+ Q + E
Sbjct: 62 ELRAGAGGPGLAALVAFVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETV 121
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ NPR K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHEMGRL 194
>gi|198412387|ref|XP_002126254.1| PREDICTED: similar to CG11334 CG11334-PB, partial [Ciona
intestinalis]
Length = 231
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 2/147 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM-KRAADSVKSSLSEWAKASPVNTVK 201
V+++ + F + +++ EKL YL +ARPTAVNM K A D VK + + + +K
Sbjct: 54 VELRKENFDGIERFREFMNEKLSYLTTARPTAVNMSKSAKDLVKLVDNLIEEKHLLEKMK 113
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
+R+++ IE ML DI+DNK + GA+ ++ N K+ +LTHCNTGSLATA YGTALG
Sbjct: 114 SRVLETIEQMLHDDITDNKQLSEFGAKHILS-NSQSDKITILTHCNTGSLATAGYGTALG 172
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
V+R+LH + + AYCTETRPYNQGAR
Sbjct: 173 VVRALHETSNLEIAYCTETRPYNQGAR 199
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 95/174 (54%), Gaps = 51/174 (29%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFP--- 70
+KIL+ LLLPH S +IN+VEDA++AIK M+VRGAP IAIVGCL + V+++ + F
Sbjct: 6 VKILNALLLPHESIYEEINSVEDAWKAIKEMKVRGAPMIAIVGCLSVAVELRKENFDGIE 65
Query: 71 ----------------------------------DN-------------ELIQLIESMLE 83
DN +++ IE ML
Sbjct: 66 RFREFMNEKLSYLTTARPTAVNMSKSAKDLVKLVDNLIEEKHLLEKMKSRVLETIEQMLH 125
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
DI+DNK + GA+ ++ N + K+ +LTHCNTGSLATA YGTALGV+R+LH
Sbjct: 126 DDITDNKQLSEFGAKHILS-NSQSDKITILTHCNTGSLATAGYGTALGVVRALH 178
>gi|357616339|gb|EHJ70136.1| eIF2B-alpha-like protein [Danaus plexippus]
Length = 351
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIE 209
D + + + KL+YLVSARPTAVN+K A D + + + V + + R I+ IE
Sbjct: 70 DKKIMRQEIEGKLNYLVSARPTAVNIKLAGDELINFANSLCADENVTADDFRERFIRSIE 129
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+ML KDI DNKAIG+ G +A++ G + +LTHCNTGSLATA YGTALGVIRSL+ A
Sbjct: 130 NMLIKDIEDNKAIGKYGCEAILKTIEGDGHVRILTHCNTGSLATAGYGTALGVIRSLNAA 189
Query: 270 NKIGAAYCTETRPYNQGAR 288
K+ YCTETRPYNQGAR
Sbjct: 190 KKLEHVYCTETRPYNQGAR 208
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 102/191 (53%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+SI YE+ L+ILDQLLLP ++ V + VED ++ I MQVRGAPAIAIVGCL L +
Sbjct: 2 SLESIKYERGKLEILDQLLLPLQTRYVKVQGVEDGWKVINKMQVRGAPAIAIVGCLSLAI 61
Query: 63 -----DIKDKQFPDNEL------------------------------------------- 74
D DK+ E+
Sbjct: 62 ELMKDDCSDKKIMRQEIEGKLNYLVSARPTAVNIKLAGDELINFANSLCADENVTADDFR 121
Query: 75 ---IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ IE+ML KDI DNKAIG+ G +A++ + +LTHCNTGSLATA YGTALG
Sbjct: 122 ERFIRSIENMLIKDIEDNKAIGKYGCEAILKTIEGDGHVRILTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLHGANKI 142
VIRSL+ A K+
Sbjct: 182 VIRSLNAAKKL 192
>gi|426387461|ref|XP_004060186.1| PREDICTED: methylthioribose-1-phosphate isomerase [Gorilla gorilla
gorilla]
Length = 369
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + A+ + V+ R+I E MLEKD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|72534748|ref|NP_001026897.1| methylthioribose-1-phosphate isomerase isoform 1 [Homo sapiens]
gi|74733279|sp|Q9BV20.1|MTNA_HUMAN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName: Full=Mediator of
RhoA-dependent invasion; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|12804573|gb|AAH01703.1| Methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)
[Homo sapiens]
gi|37181460|gb|AAQ88543.1| TLEA6390 [Homo sapiens]
gi|119604776|gb|EAW84370.1| hypothetical protein MGC3207, isoform CRA_b [Homo sapiens]
gi|190690267|gb|ACE86908.1| hypothetical protein MGC3207 protein [synthetic construct]
gi|190691641|gb|ACE87595.1| hypothetical protein MGC3207 protein [synthetic construct]
gi|312152418|gb|ADQ32721.1| hypothetical protein MGC3207 [synthetic construct]
Length = 369
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + A+ + V+ R+I E MLEKD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|321460476|gb|EFX71518.1| hypothetical protein DAPPUDRAFT_308831 [Daphnia pulex]
Length = 352
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 108/163 (66%), Gaps = 6/163 (3%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDS-LEKYVGEKLDYLVSARPTAVNMKRAADS-VKS 186
A+ ++ SL A V+++ P+ L V EKLDYLV++RPTAVNM+ AA++ VK
Sbjct: 51 AIAIVGSLSLA---VELRKLAAPETKKDLHSLVKEKLDYLVTSRPTAVNMQLAAEACVKL 107
Query: 187 SLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
S + KAS K L++ +E+ML DI+DN AIG +GA+ + KL VLTH
Sbjct: 108 SNNLVDKASVDAAEAKDVLVKHLEAMLANDIADNLAIGEHGARDIAKKCGNKDKLRVLTH 167
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTGSLATA YGTALGVIRSLH AN + YCTETRPYNQG+R
Sbjct: 168 CNTGSLATAGYGTALGVIRSLHKANLVDQVYCTETRPYNQGSR 210
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 104/194 (53%), Gaps = 52/194 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ+I Y SL+ILDQLLLP + + INNV+DA+ AI+ M+VRGAPAIAIVG L L
Sbjct: 1 MATLQAIKYNDGSLEILDQLLLPESCTYISINNVQDAWSAIREMKVRGAPAIAIVGSLSL 60
Query: 61 VVDIKDKQFPDNE----------------------------------------------- 73
V+++ P+ +
Sbjct: 61 AVELRKLAAPETKKDLHSLVKEKLDYLVTSRPTAVNMQLAAEACVKLSNNLVDKASVDAA 120
Query: 74 -----LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
L++ +E+ML DI+DN AIG +GA+ + KL VLTHCNTGSLATA YGT
Sbjct: 121 EAKDVLVKHLEAMLANDIADNLAIGEHGARDIAKKCGNKDKLRVLTHCNTGSLATAGYGT 180
Query: 129 ALGVIRSLHGANKI 142
ALGVIRSLH AN +
Sbjct: 181 ALGVIRSLHKANLV 194
>gi|397487682|ref|XP_003814918.1| PREDICTED: methylthioribose-1-phosphate isomerase [Pan paniscus]
Length = 323
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 95/137 (69%), Gaps = 3/137 (2%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESML 212
+L +V +KL +LV+ARPTAVNM RAA + + A+ + V+ R+I E ML
Sbjct: 28 ALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDML 87
Query: 213 EKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
EKD+ DN++IG GA+ L++ P K+ VLTHCNTG+LATA YGTALGVIRSLH +
Sbjct: 88 EKDLRDNRSIGDLGARHLLERAAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGR 147
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQGAR
Sbjct: 148 LEHAFCTETRPYNQGAR 164
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQ------VRGAPAIAIVG 56
+L++I Y + SL+ILDQLLLP + V D + + + R A +A V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVA 61
Query: 57 CLGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTH 115
+ ++ +I E MLEKD+ DN++IG GA+ L++ P K+ VLTH
Sbjct: 62 AREAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERAAPSGGKVTVLTH 121
Query: 116 CNTGSLATAEYGTALGVIRSLHGANKI 142
CNTG+LATA YGTALGVIRSLH ++
Sbjct: 122 CNTGALATAGYGTALGVIRSLHSLGRL 148
>gi|348564814|ref|XP_003468199.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Cavia
porcellus]
Length = 362
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 94/141 (66%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLI 208
P L +V E+L +LV+ARPTAVNM RAA + + + A + V+ R+I
Sbjct: 70 PGPAELAAFVRERLGHLVTARPTAVNMARAARDLGDAATREAARDGATEEAVRERVICYA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E ML+KD+ DN++IG GA L+D P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 130 EDMLKKDLRDNRSIGDLGAHHLLDRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQGAR
Sbjct: 190 QLGRLERAFCTETRPYNQGAR 210
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 101/188 (53%), Gaps = 53/188 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI YE SL++LDQLLLP S+ + +V+ A++ I++M+VRGAPAIA+VGCL L V
Sbjct: 2 ALESIRYEPGSLQVLDQLLLPQQSRYEVVGSVQQAWEVIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 ----------------------------------------DIKD------------KQFP 70
D+ D ++
Sbjct: 62 ELRAGAGGPGPAELAAFVRERLGHLVTARPTAVNMARAARDLGDAATREAARDGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E ML+KD+ DN++IG GA L+D P+ K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICYAEDMLKKDLRDNRSIGDLGAHHLLDRAAPQGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLH 137
LGVIRSLH
Sbjct: 182 LGVIRSLH 189
>gi|123909174|sp|Q0VFN1.1|MTNA_XENTR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|110645730|gb|AAI18768.1| Translation initiation factor eIF-2B subunit alpha/beta/delta-like
protein [Xenopus (Silurana) tropicalis]
Length = 354
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 100/148 (67%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V++ + D S +V E L +LV ARPTAVNMK+AAD + + L++ A+ + T +
Sbjct: 61 VELTSRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGL 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+IQ E++L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTAL
Sbjct: 121 AESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+RSLH ++ +CTETRPYNQG+R
Sbjct: 181 GVVRSLHVLGRLSHVFCTETRPYNQGSR 208
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 97/186 (52%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+S+ Y + SL++L+QLLLPH S+ + V+ AI++M+VRGAPAIAIVG L L V
Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAV 61
Query: 63 DIKDKQFPD--------------------------------------------------- 71
++ + D
Sbjct: 62 ELTSRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGLA 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+IQ E++L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTALG
Sbjct: 122 ESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLH 137
V+RSLH
Sbjct: 182 VVRSLH 187
>gi|410209594|gb|JAA02016.1| methylthioribose-1-phosphate isomerase homolog [Pan troglodytes]
gi|410249060|gb|JAA12497.1| methylthioribose-1-phosphate isomerase homolog [Pan troglodytes]
gi|410292892|gb|JAA25046.1| methylthioribose-1-phosphate isomerase homolog [Pan troglodytes]
gi|410292894|gb|JAA25047.1| methylthioribose-1-phosphate isomerase homolog [Pan troglodytes]
gi|410352101|gb|JAA42654.1| methylthioribose-1-phosphate isomerase homolog [Pan troglodytes]
Length = 369
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + A+ + V+ R+I E ML+KD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLQKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E ML+KD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCTEDMLQKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|225719344|gb|ACO15518.1| Translation initiation factor eIF-2B subunit alpha/beta/delta-like
protein [Caligus clemensi]
Length = 349
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 99/146 (67%), Gaps = 5/146 (3%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V+I++ DN ++ +V +K++YLV+ARPTAVN+ +A D +++ + EW + N V
Sbjct: 65 VEIRNNSAKDNRVMKSFVWDKMNYLVTARPTAVNIYKARDELRAKMDEWKEDELTNKV-- 122
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
++ E +L+ DI DN AIG G++A+++ K+ +LT CNTGSLATA YGTALGV
Sbjct: 123 --VEWCEGLLKADIRDNVAIGSIGSKAILETGRE-KKIRILTTCNTGSLATAGYGTALGV 179
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSLH ++ AY TETRPYNQG R
Sbjct: 180 IRSLHNMKRLECAYYTETRPYNQGIR 205
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 98/184 (53%), Gaps = 46/184 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y L+ILDQL LP + + I N EDA+ I+ MQVRGAPAIA+VGCL L V+
Sbjct: 7 LRAIEYSDARLRILDQLKLPFKKEYIPILNTEDAWHCIRKMQVRGAPAIALVGCLSLAVE 66
Query: 64 IKDKQFPDN---------------------------------------------ELIQLI 78
I++ DN ++++
Sbjct: 67 IRNNSAKDNRVMKSFVWDKMNYLVTARPTAVNIYKARDELRAKMDEWKEDELTNKVVEWC 126
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E +L+ DI DN AIG G++A+++ R K+ +LT CNTGSLATA YGTALGVIRSLH
Sbjct: 127 EGLLKADIRDNVAIGSIGSKAILETG-REKKIRILTTCNTGSLATAGYGTALGVIRSLHN 185
Query: 139 ANKI 142
++
Sbjct: 186 MKRL 189
>gi|114675693|ref|XP_001171000.1| PREDICTED: methylthioribose-1-phosphate isomerase isoform 1 [Pan
troglodytes]
Length = 369
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 95/140 (67%), Gaps = 17/140 (12%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAA---------DSVKSSLSEWAKASPVNTVKTRLIQLIE 209
+V +KL +LV+ARPTAVNM R A D+V+ +E A V+ R+I E
Sbjct: 78 FVRDKLSFLVTARPTAVNMSRTARDLADVAARDTVREGATEEA-------VRERVICCTE 130
Query: 210 SMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
ML+KD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 131 DMLQKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHS 190
Query: 269 ANKIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQGAR
Sbjct: 191 LGRLEHAFCTETRPYNQGAR 210
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMSRTARDLADVAARDTVREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E ML+KD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCTEDMLQKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|126323168|ref|XP_001366752.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Monodelphis
domestica]
Length = 355
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTVKTRLIQLI 208
P ++L +V + L+ LV+ARPTAVNM +AA + + A + + + V+ RLI
Sbjct: 70 PGLEALVTFVQDSLNDLVTARPTAVNMAQAAREMSEVATREAGREGATEDAVRERLICWA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKDI DN++IG GAQ L++ + PG ++ VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 130 EHMLEKDIKDNQSIGDLGAQHLLERVAPGGGQVTVLTHCNTGSLATAGYGTALGVIRSLH 189
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ +CTETRP NQGAR
Sbjct: 190 ALGRLKHVFCTETRPNNQGAR 210
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 53/217 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL---- 58
+L+S+ Y + SL +LDQLLLP + + +V A++AI++M+VRGAPAIAIVGCL
Sbjct: 2 TLESVRYSRGSLLVLDQLLLPQECRYEAVTSVRQAWEAIRAMKVRGAPAIAIVGCLSLAV 61
Query: 59 ------------GLVVDIKD-------------------KQFPD---------------- 71
LV ++D ++ +
Sbjct: 62 ELQAGAGGPGLEALVTFVQDSLNDLVTARPTAVNMAQAAREMSEVATREAGREGATEDAV 121
Query: 72 -NELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
LI E MLEKDI DN++IG GAQ L++ + P ++ VLTHCNTGSLATA YGTA
Sbjct: 122 RERLICWAEHMLEKDIKDNQSIGDLGAQHLLERVAPGGGQVTVLTHCNTGSLATAGYGTA 181
Query: 130 LGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDY 166
LGVIRSLH ++ + + N+ + +L Y
Sbjct: 182 LGVIRSLHALGRLKHVFCTETRPNNQGARLTAYELVY 218
>gi|432847903|ref|XP_004066207.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Oryzias
latipes]
Length = 353
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 108/187 (57%), Gaps = 48/187 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+IL+QLLLPH + +I V+ AY+AIK+M+VRGAPAIAIVGCL L V
Sbjct: 2 TLEAIRYGTGSLQILNQLLLPHQTVYEEIRGVQAAYEAIKAMKVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDK-----------------------------------QFPDNE------------LI 75
+++ +F +NE +I
Sbjct: 62 ELRAGAGGDDPVTFIRESLCHLTSARPTAVNMGRAARELIEFAENESMEKNSEQLRESVI 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
IE ML++D++DNK IG GAQ ++ PR S ++VLTHCNTGSLATA YGTALGV+RS
Sbjct: 122 AWIEEMLQRDVNDNKKIGNYGAQHILSGVPRDS-VSVLTHCNTGSLATAGYGTALGVVRS 180
Query: 136 LHGANKI 142
LH ++
Sbjct: 181 LHALGRL 187
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 87/130 (66%), Gaps = 1/130 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ E L +L SARPTAVNM RAA + + ++ +I IE ML++D++D
Sbjct: 75 FIRESLCHLTSARPTAVNMGRAARELIEFAENESMEKNSEQLRESVIAWIEEMLQRDVND 134
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
NK IG GAQ ++ P S ++VLTHCNTGSLATA YGTALGV+RSLH ++ YCT
Sbjct: 135 NKKIGNYGAQHILSGVPRDS-VSVLTHCNTGSLATAGYGTALGVVRSLHALGRLKRVYCT 193
Query: 279 ETRPYNQGAR 288
ETRPYNQG+R
Sbjct: 194 ETRPYNQGSR 203
>gi|121706416|ref|XP_001271470.1| translation initiation factor, putative [Aspergillus clavatus NRRL
1]
gi|313471302|sp|A1CGN9.1|MTNA_ASPCL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|119399618|gb|EAW10044.1| translation initiation factor, putative [Aspergillus clavatus NRRL
1]
Length = 385
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 91/134 (67%), Gaps = 4/134 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEKDI 216
++ EKLDYLVS+RPTAVN+ AA + + +S+ A+ S V IQ E ML KD+
Sbjct: 82 FIQEKLDYLVSSRPTAVNLSDAARKLAAHVSDHAEMPNSTGRAVAEAFIQAAEEMLAKDL 141
Query: 217 SDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
DN IG+ GA+ +I L G SK +LTHCNTGSLAT+ YGTALGVIR+L N +
Sbjct: 142 KDNTNIGKYGAEWIIRNALAGGRSKATILTHCNTGSLATSGYGTALGVIRALASKNALAY 201
Query: 275 AYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 202 AYCTETRPYNQGSR 215
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IQ E ML KD+ DN IG+ GA+ +I L SK +LTHCNTGSLAT+ YGTALG
Sbjct: 129 FIQAAEEMLAKDLKDNTNIGKYGAEWIIRNALAGGRSKATILTHCNTGSLATSGYGTALG 188
Query: 132 VIRSLHGANKI 142
VIR+L N +
Sbjct: 189 VIRALASKNAL 199
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+L++I Y L I+DQL LP+ K +++ +DA+ AIK M+VRGA
Sbjct: 2 TLEAIRYSTGKLVIIDQLQLPYVEKYIEVPTSKDAWHAIKKMRVRGA 48
>gi|255938620|ref|XP_002560080.1| Pc14g00860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|313471331|sp|B6H5R4.1|MTNA_PENCW RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|211584701|emb|CAP74227.1| Pc14g00860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 382
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 99/145 (68%), Gaps = 3/145 (2%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRL 204
DK + + +Y+ EKL YLV++RPTAVN+ AA +++ +++ KA S + V T
Sbjct: 69 DKLSQSPEEVCQYITEKLAYLVTSRPTAVNLADAARKLEAVVTDCTKAPGSTGHEVATAF 128
Query: 205 IQLIESMLEKDISDNKAIGRNGAQAL-IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
I+ E M+ KD+ DNK IG NGA+ + I G S++ VLTHCNTGSLAT+ YGTALGV+
Sbjct: 129 IKAAEDMMGKDLEDNKRIGHNGAEWIAIHAAKGNSEVAVLTHCNTGSLATSGYGTALGVV 188
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RSL N + AYCTETRPYNQG+R
Sbjct: 189 RSLAEKNTLRHAYCTETRPYNQGSR 213
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 95/197 (48%), Gaps = 59/197 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I + K +L+ILDQL LP + + I ED + AIK M+VRGAPAIAIV L L +
Sbjct: 2 LQAIKFSKGNLEILDQLQLPFVEEYIPIRTTEDGWHAIKDMKVRGAPAIAIVAMLALAAE 61
Query: 64 I-------KDKQFPDNELIQLI-------------------------------------- 78
+ K Q P+ E+ Q I
Sbjct: 62 LTSAVDSDKLSQSPE-EVCQYITEKLAYLVTSRPTAVNLADAARKLEAVVTDCTKAPGST 120
Query: 79 ------------ESMLEKDISDNKAIGRNGAQAL-IDLNPRVSKLNVLTHCNTGSLATAE 125
E M+ KD+ DNK IG NGA+ + I S++ VLTHCNTGSLAT+
Sbjct: 121 GHEVATAFIKAAEDMMGKDLEDNKRIGHNGAEWIAIHAAKGNSEVAVLTHCNTGSLATSG 180
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGV+RSL N +
Sbjct: 181 YGTALGVVRSLAEKNTL 197
>gi|62859691|ref|NP_001016877.1| methylthioribose-1-phosphate isomerase [Xenopus (Silurana)
tropicalis]
gi|89272769|emb|CAJ83906.1| novel protein containing Initiation factor 2 subunit family domain
[Xenopus (Silurana) tropicalis]
Length = 354
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT--V 200
V+ + D S +V E L +LV ARPTAVNMK+AAD + + L++ A+ + T +
Sbjct: 61 VERTSRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGL 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+IQ E++L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTAL
Sbjct: 121 AESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+RSLH ++ +CTETRPYNQG+R
Sbjct: 181 GVVRSLHVLGRLSHVFCTETRPYNQGSR 208
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 96/186 (51%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+S+ Y + SL++L+QLLLPH S+ + V+ AI++M+VRGAPAIAIVG L L V
Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAV 61
Query: 63 DIKDKQFPD--------------------------------------------------- 71
+ + D
Sbjct: 62 ERTSRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGLA 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+IQ E++L+KD+ DN+ IG GA+ +++ K+ +LTHCNTGSLATA YGTALG
Sbjct: 122 ESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLH 137
V+RSLH
Sbjct: 182 VVRSLH 187
>gi|162139066|ref|NP_001104708.1| methylthioribose-1-phosphate isomerase [Danio rerio]
gi|313471309|sp|A9JRE2.1|MTNA_DANRE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|161612166|gb|AAI55627.1| Zgc:172216 protein [Danio rerio]
gi|213624637|gb|AAI71374.1| Zgc:172216 [Danio rerio]
gi|213627458|gb|AAI71376.1| Zgc:172216 [Danio rerio]
Length = 353
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 104/182 (57%), Gaps = 48/182 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+IL+QLLLP + +I +V D Y+AIKSM+VRGAPAIAIVGCL L V
Sbjct: 2 TLEAIRYRSGSLQILNQLLLPRETVYDEIRSVRDGYEAIKSMKVRGAPAIAIVGCLSLAV 61
Query: 63 DIKD-----------------------------------KQFPDNE------------LI 75
+++ +F +NE +I
Sbjct: 62 ELRAGAGAEDLVSFVRDSLCHLTSARPTAVNMGRAARELMEFTENESMEKNTEQLRDSVI 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
IE MLE+D++DNK IG GAQ ++ PR S + +LTHCNTGSLATA YGTALGV+RS
Sbjct: 122 GWIEEMLERDVNDNKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRS 180
Query: 136 LH 137
LH
Sbjct: 181 LH 182
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 88/135 (65%), Gaps = 1/135 (0%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ L +V + L +L SARPTAVNM RAA + + ++ +I IE MLE
Sbjct: 70 EDLVSFVRDSLCHLTSARPTAVNMGRAARELMEFTENESMEKNTEQLRDSVIGWIEEMLE 129
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D++DNK IG GAQ ++ P S + +LTHCNTGSLATA YGTALGV+RSLH ++
Sbjct: 130 RDVNDNKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTALGVVRSLHMLGRLK 188
Query: 274 AAYCTETRPYNQGAR 288
YCTETRPYNQGAR
Sbjct: 189 RLYCTETRPYNQGAR 203
>gi|167516826|ref|XP_001742754.1| hypothetical protein [Monosiga brevicollis MX1]
gi|313471323|sp|A9UQ62.1|MTNA_MONBE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|163779378|gb|EDQ92992.1| predicted protein [Monosiga brevicollis MX1]
Length = 361
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V +K F L +V L++L ++RPTAVN+ A +++ L E ++
Sbjct: 62 VVMKRSTFATAAELAAFVRTSLEHLRTSRPTAVNLFEMAGRLEALLQEQPADCTEAALRQ 121
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALI-DLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
++ IE M++ DI+DN+AIG+ GA+A++ DL+ V K+ VLTHCNTGSLATA YGTALG
Sbjct: 122 AVLSYIEGMMQADIADNQAIGKFGAEAILKDLSADV-KVKVLTHCNTGSLATARYGTALG 180
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSLH ++ A+CTETRPYNQGAR
Sbjct: 181 VIRSLHEQQRLEHAFCTETRPYNQGAR 207
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 51/192 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L++I Y+ L +LDQ+ LP + ++ +++D + AI+ M+VRGAPAIAIV L +
Sbjct: 1 MATLEAIKYDGEKLLVLDQIKLPLETHYDEVLSIQDGWDAIREMRVRGAPAIAIVAALTI 60
Query: 61 VVDIKDKQFPD------------------------------------------------- 71
V +K F
Sbjct: 61 AVVMKRSTFATAAELAAFVRTSLEHLRTSRPTAVNLFEMAGRLEALLQEQPADCTEAALR 120
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
++ IE M++ DI+DN+AIG+ GA+A++ DL+ V K+ VLTHCNTGSLATA YGTAL
Sbjct: 121 QAVLSYIEGMMQADIADNQAIGKFGAEAILKDLSADV-KVKVLTHCNTGSLATARYGTAL 179
Query: 131 GVIRSLHGANKI 142
GVIRSLH ++
Sbjct: 180 GVIRSLHEQQRL 191
>gi|26338690|dbj|BAC33016.1| unnamed protein product [Mus musculus]
Length = 369
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V ++L LV+ARPTAVNM RAA + ++ A+ + TV+ R+I+ E MLEKD+
Sbjct: 78 FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ NP K+ VLTH NTG+LATA YGTALGVIRSLH ++
Sbjct: 138 KDNRSIGDLGARHLLEQTNPRGGKVTVLTHLNTGALATAGYGTALGVIRSLHDMGRLEHT 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+ILDQL LP +++V+ A +AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK--------------------------QFPDNE------- 73
+ ++D+ Q + E
Sbjct: 62 ELRAGAGGPGLAALVAFVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETV 121
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ NPR K+ VLTH NTG+LATA YGTA
Sbjct: 122 RERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHLNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHDMGRL 194
>gi|405976258|gb|EKC40771.1| Methylthioribose-1-phosphate isomerase [Crassostrea gigas]
Length = 661
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 99/149 (66%), Gaps = 5/149 (3%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV---KSSLSEWAKASPVNT 199
V++K F + L K++ EKL+YLV++RPTAVNM +AA SL+ +K + +
Sbjct: 61 VELKKTSFSSKEELSKFIEEKLNYLVTSRPTAVNMGKAAKKFIQKSESLTTNSKFTLQDM 120
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
+K R++ IE ML DIS NK + + GA ++ L +++LTHCNTGSLATA YGTA
Sbjct: 121 LK-RIVTAIEEMLPNDISVNKTLSKYGADHILQLF-NDEPVDILTHCNTGSLATAGYGTA 178
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR+LH K+ YCTETRPYNQGAR
Sbjct: 179 LGVIRTLHERKKLLHVYCTETRPYNQGAR 207
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 102/194 (52%), Gaps = 52/194 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I YE +L+ILDQLLLP K + I++VED ++AIK MQVRGAPAIAIVGCL L V
Sbjct: 2 TLEAIKYENDTLEILDQLLLPGEHKYIPISSVEDGWKAIKLMQVRGAPAIAIVGCLSLAV 61
Query: 63 DIKDKQFPDNE------------------------------------------------- 73
++K F E
Sbjct: 62 ELKKTSFSSKEELSKFIEEKLNYLVTSRPTAVNMGKAAKKFIQKSESLTTNSKFTLQDML 121
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++ IE ML DIS NK + + GA ++ L +++LTHCNTGSLATA YGTALG
Sbjct: 122 KRIVTAIEEMLPNDISVNKTLSKYGADHILQLF-NDEPVDILTHCNTGSLATAGYGTALG 180
Query: 132 VIRSLHGANKIVDI 145
VIR+LH K++ +
Sbjct: 181 VIRTLHERKKLLHV 194
>gi|255550413|ref|XP_002516257.1| Methylthioribose-1-phosphate isomerase, putative [Ricinus communis]
gi|313471351|sp|B9RR88.1|MTNA_RICCO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|223544743|gb|EEF46259.1| Methylthioribose-1-phosphate isomerase, putative [Ricinus communis]
Length = 382
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 2/149 (1%)
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNT 199
++ + D ND+ ++ +KL+YLVS+RPTAVN+ AA+ +K + + A AS N+
Sbjct: 76 EVFNFDDFTGTSNDA-ASFLFKKLEYLVSSRPTAVNLSDAANKLKEVIYKAAATASDSNS 134
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
V I+ E ML+ DI+ NKAIG +GA + + +L++LTHCNTGSLATA YGTA
Sbjct: 135 VFQAYIEAAEIMLKDDIASNKAIGSHGASFIQNQLKNPQRLSILTHCNTGSLATAGYGTA 194
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR+LH A + AYCTETRP+NQG+R
Sbjct: 195 LGVIRALHAAGVLRRAYCTETRPFNQGSR 223
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E ML+ DI+ NKAIG +GA + + +L++LTHCNTGSLATA YGTALGVIR
Sbjct: 140 IEAAEIMLKDDIASNKAIGSHGASFIQNQLKNPQRLSILTHCNTGSLATAGYGTALGVIR 199
Query: 135 SLHGA 139
+LH A
Sbjct: 200 ALHAA 204
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+LQSI Y + SLK+LDQ LP ++ +DI N D + AI+ M VRGA
Sbjct: 16 TLQSICYNRGSLKLLDQRKLPLETEFLDIRNSSDGWSAIREMVVRGA 62
>gi|212543327|ref|XP_002151818.1| translation initiation factor, putative [Talaromyces marneffei ATCC
18224]
gi|313471346|sp|B6QRG1.1|MTNA_PENMQ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|210066725|gb|EEA20818.1| translation initiation factor, putative [Talaromyces marneffei ATCC
18224]
Length = 384
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 92/134 (68%), Gaps = 4/134 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
++ EKL YLV++RPTAVN+ AA ++ ++E K S ++ +Q E ML D+
Sbjct: 82 FIIEKLHYLVTSRPTAVNLADAARKFETMVTEHTKTQGSTGQSLVAAYLQEAELMLVHDL 141
Query: 217 SDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
SDNK IG GA+ +++ G +K+NVLTHCNTGSLATA YGTALGVIRSLH N +
Sbjct: 142 SDNKNIGAYGAKWILERAATEGQAKVNVLTHCNTGSLATAGYGTALGVIRSLHEGNALNR 201
Query: 275 AYCTETRPYNQGAR 288
YCTETRPYNQGAR
Sbjct: 202 VYCTETRPYNQGAR 215
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+Q E ML D+SDNK IG GA+ +++ +K+NVLTHCNTGSLATA YGTALGV
Sbjct: 130 LQEAELMLVHDLSDNKNIGAYGAKWILERAATEGQAKVNVLTHCNTGSLATAGYGTALGV 189
Query: 133 IRSLHGANKI 142
IRSLH N +
Sbjct: 190 IRSLHEGNAL 199
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+I Y + L+I+DQL LP ++ + I + +D + AIK M+VRGAPAIAIV L L V
Sbjct: 2 SLQAIKYADNQLQIIDQLQLPFVTEYIPIRSAQDGWHAIKEMRVRGAPAIAIVAILSLAV 61
Query: 63 DIKDKQ 68
++ + Q
Sbjct: 62 ELSEIQ 67
>gi|258566575|ref|XP_002584032.1| S-methyl-5-thioribose-1-phosphate isomerase [Uncinocarpus reesii
1704]
gi|313471337|sp|C4JWQ7.1|MTNA_UNCRE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|237907733|gb|EEP82134.1| S-methyl-5-thioribose-1-phosphate isomerase [Uncinocarpus reesii
1704]
Length = 386
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 97/142 (68%), Gaps = 5/142 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL--IQLIE 209
D + + Y+ +K+DYLVS+RPTAVN+ +A +K L + A+ S ++ V+T + IQ E
Sbjct: 77 DGEDVRAYIEQKMDYLVSSRPTAVNLSDSAQKIKLLLDQRARKSGLSGVETAMAFIQHAE 136
Query: 210 SMLEKDISDNKAIGRNGAQALI-DLNPGVSKLN--VLTHCNTGSLATAEYGTALGVIRSL 266
ML +D++DN +IG GA ++ + + N VLTHCNTGSLATA YGTALG+IR L
Sbjct: 137 QMLARDLADNHSIGEYGATWILKNTRAALEGGNTCVLTHCNTGSLATAGYGTALGIIRRL 196
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
H ++ AYCTETRPYNQGAR
Sbjct: 197 HEHGRLSRAYCTETRPYNQGAR 218
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 61/195 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y++ L I+DQL LPH +K + I++ E + AIK+MQVRGAPAIAIV L L V
Sbjct: 4 ALEAIKYDRGRLFIIDQLQLPHVTKFIPIDSSEAGWHAIKAMQVRGAPAIAIVAVLSLAV 63
Query: 63 D----IKDKQFPDN---------------------------------------------- 72
+ + + P++
Sbjct: 64 EMLNLVSENMIPEDGEDVRAYIEQKMDYLVSSRPTAVNLSDSAQKIKLLLDQRARKSGLS 123
Query: 73 ------ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS----KLNVLTHCNTGSLA 122
IQ E ML +D++DN +IG GA ++ N R + VLTHCNTGSLA
Sbjct: 124 GVETAMAFIQHAEQMLARDLADNHSIGEYGATWILK-NTRAALEGGNTCVLTHCNTGSLA 182
Query: 123 TAEYGTALGVIRSLH 137
TA YGTALG+IR LH
Sbjct: 183 TAGYGTALGIIRRLH 197
>gi|317145214|ref|XP_001820594.2| methylthioribose-1-phosphate isomerase [Aspergillus oryzae RIB40]
Length = 366
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEK 214
+ ++ EKL YLVS+RPTAVN+ AA +++ ++E K S + V T IQ E+ML K
Sbjct: 80 QTFITEKLHYLVSSRPTAVNLSDAAGKLETIVAESVKMPESTGHAVATAFIQAAEAMLAK 139
Query: 215 DISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
D+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALGVIR+L + +
Sbjct: 140 DVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALGVIRALSSTDTL 199
Query: 273 GAAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 200 RHAYCTETRPYNQGSR 215
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IQ E+ML KD+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALG
Sbjct: 129 FIQAAEAMLAKDVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALG 188
Query: 132 VIRSL 136
VIR+L
Sbjct: 189 VIRAL 193
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+LQ+I Y L I+DQL LPH K V I+ E+ + AIK M+VRGA
Sbjct: 2 TLQAIKYSGGKLAIIDQLQLPHVEKYVTIHTSEEGWHAIKEMRVRGA 48
>gi|332253026|ref|XP_003275653.1| PREDICTED: methylthioribose-1-phosphate isomerase isoform 1
[Nomascus leucogenys]
Length = 369
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + ++ A+ + V+ R+I+ E MLEKD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADAAAQEAEREGATEEAVRERVIRCAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLKHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 108/193 (55%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK--------------------------QFPDNE------- 73
+ ++DK Q + E
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADAAAQEAEREGATEEAV 121
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|119501360|ref|XP_001267437.1| translation initiation factor, putative [Neosartorya fischeri NRRL
181]
gi|313471326|sp|A1CY38.1|MTNA_NEOFI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|119415602|gb|EAW25540.1| translation initiation factor, putative [Neosartorya fischeri NRRL
181]
Length = 387
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 96/148 (64%), Gaps = 4/148 (2%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKT 202
+ DK + ++ ++ EKLDYLVS+RPTAVN+ AA ++S++S+ A TV
Sbjct: 70 VHDKLSSGAEEVKLFIREKLDYLVSSRPTAVNLSDAARKLESTISDHADTPGATGRTVAE 129
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTAL 260
I+ E M+ KD+ DN IG+NGA+ +I L S VLTHCNTGSLAT+ YGTAL
Sbjct: 130 AFIRAAEDMMTKDLDDNMRIGKNGAEWIIKHALAARKSTATVLTHCNTGSLATSGYGTAL 189
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR+L + AYCTETRPYNQG+R
Sbjct: 190 GVIRALASKKALEHAYCTETRPYNQGSR 217
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 90/191 (47%), Gaps = 58/191 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y + L I+DQL LP+ K + I EDA+ AIK M+VRGAPAIAIV L L +
Sbjct: 5 LQAIRYSRGKLAIIDQLQLPYVEKFITIQTPEDAWHAIKEMRVRGAPAIAIVAALALASE 64
Query: 64 IKD--------------KQFPDNELIQLIESM------------LEKDISDNK----AIG 93
+ K F +L L+ S LE ISD+ A G
Sbjct: 65 LNTLIVHDKLSSGAEEVKLFIREKLDYLVSSRPTAVNLSDAARKLESTISDHADTPGATG 124
Query: 94 RNGAQALI-----------DLNPRVSK-----------------LNVLTHCNTGSLATAE 125
R A+A I D N R+ K VLTHCNTGSLAT+
Sbjct: 125 RTVAEAFIRAAEDMMTKDLDDNMRIGKNGAEWIIKHALAARKSTATVLTHCNTGSLATSG 184
Query: 126 YGTALGVIRSL 136
YGTALGVIR+L
Sbjct: 185 YGTALGVIRAL 195
>gi|121803335|sp|Q2UIM3.1|MTNA_ASPOR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|83768454|dbj|BAE58592.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 381
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEK 214
+ ++ EKL YLVS+RPTAVN+ AA +++ ++E K S + V T IQ E+ML K
Sbjct: 80 QTFITEKLHYLVSSRPTAVNLSDAAGKLETIVAESVKMPESTGHAVATAFIQAAEAMLAK 139
Query: 215 DISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
D+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALGVIR+L + +
Sbjct: 140 DVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALGVIRALSSTDTL 199
Query: 273 GAAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 200 RHAYCTETRPYNQGSR 215
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IQ E+ML KD+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALG
Sbjct: 129 FIQAAEAMLAKDVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALG 188
Query: 132 VIRSL 136
VIR+L
Sbjct: 189 VIRAL 193
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+LQ+I Y L I+DQL LPH K V I+ E+ + AIK M+VRGA
Sbjct: 2 TLQAIKYSGGKLAIIDQLQLPHVEKYVTIHTSEEGWHAIKEMRVRGA 48
>gi|391874046|gb|EIT82996.1| putative translation initiation factor [Aspergillus oryzae 3.042]
Length = 381
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/136 (51%), Positives = 94/136 (69%), Gaps = 4/136 (2%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEK 214
+ ++ EKL YLVS+RPTAVN+ AA +++ ++E K S + V T IQ E+ML K
Sbjct: 80 QTFITEKLHYLVSSRPTAVNLSDAAGKLETIVAESVKMPESTGHAVATAFIQAAEAMLAK 139
Query: 215 DISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
D+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALGVIR+L + +
Sbjct: 140 DVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALGVIRALSSTDTL 199
Query: 273 GAAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 200 RHAYCTETRPYNQGSR 215
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IQ E+ML KD+ DN+ IG GA+ + + L+ +K VLTHCNTGSLATA +GTALG
Sbjct: 129 FIQAAEAMLAKDVEDNRMIGEYGAKWISENALSKNFTKATVLTHCNTGSLATAGFGTALG 188
Query: 132 VIRSL 136
VIR+L
Sbjct: 189 VIRAL 193
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+LQ+I Y L I+DQL LPH K V I+ E+ + AIK M+VRGA
Sbjct: 2 TLQAIKYSGGKLAIIDQLQLPHVEKYVTIHTSEEGWHAIKEMRVRGA 48
>gi|70994928|ref|XP_752241.1| translation initiation factor [Aspergillus fumigatus Af293]
gi|74671078|sp|Q4WNI1.1|MTNA_ASPFU RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|313471303|sp|B0Y5C3.1|MTNA_ASPFC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|66849875|gb|EAL90203.1| translation initiation factor, putative [Aspergillus fumigatus
Af293]
gi|159124841|gb|EDP49958.1| translation initiation factor, putative [Aspergillus fumigatus
A1163]
Length = 387
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 4/148 (2%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKT 202
I DK + ++ ++ EKLDYLVS+RPTAVN+ AA ++S++S A TV
Sbjct: 70 IHDKLSSRAEEVKLFIREKLDYLVSSRPTAVNLSDAARKLESTISGHADTPGATGRTVAE 129
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTAL 260
I+ E M+ KD+ DN IG+NGA+ +I L S VLTHCNTGSLAT+ YGTAL
Sbjct: 130 AFIRAAEEMMTKDLDDNMKIGQNGAEWIIKHALARHKSTATVLTHCNTGSLATSGYGTAL 189
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRSL + AYCTETRPYNQG+R
Sbjct: 190 GVIRSLASKKALEHAYCTETRPYNQGSR 217
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 88/191 (46%), Gaps = 58/191 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y L I+DQL LP+ K + I EDA+ AIK M+VRGAPAIAIV L L +
Sbjct: 5 LQAIRYSHGKLAIIDQLQLPYVEKFITIRTSEDAWHAIKEMRVRGAPAIAIVAALALASE 64
Query: 64 IKD--------------KQFPDNELIQLIESM------------LEKDISDNK----AIG 93
+ K F +L L+ S LE IS + A G
Sbjct: 65 LNTLIIHDKLSSRAEEVKLFIREKLDYLVSSRPTAVNLSDAARKLESTISGHADTPGATG 124
Query: 94 RNGAQALI-----------DLNPRV-----------------SKLNVLTHCNTGSLATAE 125
R A+A I D N ++ S VLTHCNTGSLAT+
Sbjct: 125 RTVAEAFIRAAEEMMTKDLDDNMKIGQNGAEWIIKHALARHKSTATVLTHCNTGSLATSG 184
Query: 126 YGTALGVIRSL 136
YGTALGVIRSL
Sbjct: 185 YGTALGVIRSL 195
>gi|322788005|gb|EFZ13846.1| hypothetical protein SINV_10550 [Solenopsis invicta]
Length = 361
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 92/137 (67%), Gaps = 5/137 (3%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKS---SLSEWAKASPVNTVKTRLIQLIESM 211
+L + + + LDYL++ARPTAVNMK AA+ + SL+E ++ + R I + M
Sbjct: 76 ALRQAIKDNLDYLLTARPTAVNMKTAANELGDLAYSLNE--DTCTLSEMIDRFIDKVSDM 133
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
LE DI DNK+IG G+ ++ P S + VLTHCNTGSLATA YGTALGVIRSLH K
Sbjct: 134 LELDIKDNKSIGDFGSNEILGNVPKESCVRVLTHCNTGSLATAGYGTALGVIRSLHKTGK 193
Query: 272 IGAAYCTETRPYNQGAR 288
+ YCTETRPYNQGAR
Sbjct: 194 LEQVYCTETRPYNQGAR 210
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 96/193 (49%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L++I + K L+ILDQ LLP T+ + +N V+D + I MQVRGAPAIA+VG L L
Sbjct: 2 TLEAIKWNKVNGKLEILDQTLLPATTCYIQVNGVKDGWHVINKMQVRGAPAIALVGSLSL 61
Query: 61 VVDI----------------------------------------KDKQFPDNE------- 73
V+I D + NE
Sbjct: 62 AVEILQHPGYEHKMALRQAIKDNLDYLLTARPTAVNMKTAANELGDLAYSLNEDTCTLSE 121
Query: 74 ----LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
I + MLE DI DNK+IG G+ ++ P+ S + VLTHCNTGSLATA YGTA
Sbjct: 122 MIDRFIDKVSDMLELDIKDNKSIGDFGSNEILGNVPKESCVRVLTHCNTGSLATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH K+
Sbjct: 182 LGVIRSLHKTGKL 194
>gi|313471329|sp|C1G9Q3.1|MTNA_PARBD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|226292485|gb|EEH47905.1| methylthioribose-1-phosphate isomerase [Paracoccidioides
brasiliensis Pb18]
Length = 382
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 103/168 (61%), Gaps = 8/168 (4%)
Query: 129 ALGVIRSLHGANKIVDI--KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKS 186
A+ ++ +L A ++ D+ K K +E ++ EKL+Y+ S+RPTAVN+ AA +
Sbjct: 50 AIAIVAALSLAVELYDLIQKGKLSDQAKEVEIFIREKLEYIASSRPTAVNLVEAAGRLGK 109
Query: 187 SLSEWAKASPVN--TVKTRLIQLIESMLEKDISDNKAIGRNGAQAL----IDLNPGVSKL 240
+ + V V I+ E MLE D+ DN+ IG GA+ + ID G K+
Sbjct: 110 IVVARSCGEGVTGREVAEEYIRAAEKMLEDDVKDNRGIGEFGAKWIMKQAIDGAEGKGKV 169
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCNTGSLATA YGTALGVIRSLH AN + AYCTETRPYNQG+R
Sbjct: 170 AVLTHCNTGSLATAGYGTALGVIRSLHAANSLKHAYCTETRPYNQGSR 217
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 92/199 (46%), Gaps = 60/199 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I Y L IL+QL LPH + I + DA+ AI M+VRGAPAIAIV L L V+
Sbjct: 3 LIAISYSHGKLSILNQLFLPHQTTYDPIYSACDAWHAIHDMRVRGAPAIAIVAALSLAVE 62
Query: 64 IKD--------KQFPDNEL----------------IQLIES------------------- 80
+ D Q + E+ + L+E+
Sbjct: 63 LYDLIQKGKLSDQAKEVEIFIREKLEYIASSRPTAVNLVEAAGRLGKIVVARSCGEGVTG 122
Query: 81 ---------MLEKDISDN----KAIGRNGAQAL----IDLNPRVSKLNVLTHCNTGSLAT 123
EK + D+ + IG GA+ + ID K+ VLTHCNTGSLAT
Sbjct: 123 REVAEEYIRAAEKMLEDDVKDNRGIGEFGAKWIMKQAIDGAEGKGKVAVLTHCNTGSLAT 182
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSLH AN +
Sbjct: 183 AGYGTALGVIRSLHAANSL 201
>gi|449452584|ref|XP_004144039.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Cucumis
sativus]
Length = 395
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQLIESMLEKDIS 217
++ +KLDYLVS+RPTAVN+ AA +K +S A S + V I+ E+MLE D++
Sbjct: 107 FIADKLDYLVSSRPTAVNLGDAAIKLKEIVSRAAAISSEASSVFQAFIEAAEAMLEDDVA 166
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG GA + D + K +VLTHCNTGSLATA YGTALGVIR+LH A + AYC
Sbjct: 167 SNKAIGLYGANYIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYC 226
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 227 TETRPFNQGSR 237
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I+ E+MLE D++ NKAIG GA + D + K +VLTHCNTGSLATA YGTALGVI
Sbjct: 153 FIEAAEAMLEDDVASNKAIGLYGANYIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVI 212
Query: 134 RSLHGA 139
R+LH A
Sbjct: 213 RALHSA 218
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
SLQSI Y++ SL++LDQ LP + +DI + D + AI+ M VRGA
Sbjct: 30 SLQSICYKRGSLRLLDQRKLPLETVYLDIKDATDGWHAIRDMVVRGA 76
>gi|449519354|ref|XP_004166700.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Cucumis
sativus]
Length = 325
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQLIESMLEKDIS 217
++ +KLDYLVS+RPTAVN+ AA +K +S A S + V I+ E+MLE D++
Sbjct: 37 FIADKLDYLVSSRPTAVNLGDAAIKLKEIVSRAAAISSEASSVFQAFIEAAEAMLEDDVA 96
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG GA + D + K +VLTHCNTGSLATA YGTALGVIR+LH A + AYC
Sbjct: 97 SNKAIGLYGANYIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVIRALHSAGVLERAYC 156
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 157 TETRPFNQGSR 167
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I+ E+MLE D++ NKAIG GA + D + K +VLTHCNTGSLATA YGTALGVI
Sbjct: 83 FIEAAEAMLEDDVASNKAIGLYGANYIRDQQKSLEKFSVLTHCNTGSLATAGYGTALGVI 142
Query: 134 RSLHGA 139
R+LH A
Sbjct: 143 RALHSA 148
>gi|443710349|gb|ELU04603.1| hypothetical protein CAPTEDRAFT_225838 [Capitella teleta]
Length = 318
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 100/162 (61%), Gaps = 6/162 (3%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV+ SL A +++ + F D L+ ++ +KLDYLVSARPTAVNM +
Sbjct: 10 AIGVVGSLSLAVELIPLTFSSF---DDLKAFMQKKLDYLVSARPTAVNMADCRSKLMKRT 66
Query: 189 SEWAKASPVNT--VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHC 246
E S V VK L+ ++E L D+ NK + + GA +++ N K+ +LTHC
Sbjct: 67 DELIAKSGVTVEEVKAALVSMMEGFLPLDVETNKKMCKFGADHILE-NVKDEKVIILTHC 125
Query: 247 NTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
NTGSLATA YGTALGV+RSLHG + +CTETRPYNQGAR
Sbjct: 126 NTGSLATAGYGTALGVVRSLHGRGLLEHCFCTETRPYNQGAR 167
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L+ ++E L D+ NK + + GA +++ N + K+ +LTHCNTGSLATA YGTALGV+
Sbjct: 84 LVSMMEGFLPLDVETNKKMCKFGADHILE-NVKDEKVIILTHCNTGSLATAGYGTALGVV 142
Query: 134 RSLHG 138
RSLHG
Sbjct: 143 RSLHG 147
>gi|224088736|ref|XP_002308521.1| predicted protein [Populus trichocarpa]
gi|313471349|sp|B9HCR2.1|MTNA_POPTR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|222854497|gb|EEE92044.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 92/131 (70%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDIS 217
++ KLDYLVS+RPTAVN+ AA +K +S+ A A S +V I+ E ML D++
Sbjct: 91 FLAGKLDYLVSSRPTAVNLSDAATKLKEVVSKAAAAASNCQSVFQAYIEAAEIMLADDVA 150
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG GA+ + + +KL+VLTHCNTGSLATA YGTALGVIR+LHG + AYC
Sbjct: 151 SNKAIGSYGARFIQNQQKDPTKLSVLTHCNTGSLATAGYGTALGVIRALHGEGVLQRAYC 210
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 211 TETRPFNQGSR 221
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 88/188 (46%), Gaps = 52/188 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------- 47
+LQSI Y + SLK+LDQ LP + +DI + D + AI+ M VR
Sbjct: 14 TLQSICYHRGSLKLLDQRKLPLETTYLDIKDASDGWLAIREMVVRGAPAIAISAALSLAV 73
Query: 48 ---------GAPAIA----------IVGCLGLVVDIKDKQFPDNEL-------------- 74
G P A +V V++ D E+
Sbjct: 74 EVSNLENFNGTPVEAASFLAGKLDYLVSSRPTAVNLSDAATKLKEVVSKAAAAASNCQSV 133
Query: 75 ----IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
I+ E ML D++ NKAIG GA+ + + +KL+VLTHCNTGSLATA YGTAL
Sbjct: 134 FQAYIEAAEIMLADDVASNKAIGSYGARFIQNQQKDPTKLSVLTHCNTGSLATAGYGTAL 193
Query: 131 GVIRSLHG 138
GVIR+LHG
Sbjct: 194 GVIRALHG 201
>gi|242786340|ref|XP_002480786.1| translation initiation factor, putative [Talaromyces stipitatus
ATCC 10500]
gi|313471334|sp|B8M7D2.1|MTNA_TALSN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|218720933|gb|EED20352.1| translation initiation factor, putative [Talaromyces stipitatus
ATCC 10500]
Length = 384
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 4/134 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEKDI 216
++ EKL YLV++RPTAVN+ AA ++ ++E +A S ++ ++ E ML D+
Sbjct: 82 FIIEKLHYLVTSRPTAVNLADAARKFENMVTEHTRAQDSTGQSLVAAYLKEAELMLVHDL 141
Query: 217 SDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
SDN+ IG GA+ +++ G +K+NVLTHCNTGSLATA YGTALGVIRSLH N +
Sbjct: 142 SDNQNIGEYGAKWILERAATQGQNKVNVLTHCNTGSLATAGYGTALGVIRSLHAKNALNR 201
Query: 275 AYCTETRPYNQGAR 288
YCTETRPYNQGAR
Sbjct: 202 VYCTETRPYNQGAR 215
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 2/66 (3%)
Query: 79 ESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E ML D+SDN+ IG GA+ +++ +K+NVLTHCNTGSLATA YGTALGVIRSL
Sbjct: 134 ELMLVHDLSDNQNIGEYGAKWILERAATQGQNKVNVLTHCNTGSLATAGYGTALGVIRSL 193
Query: 137 HGANKI 142
H N +
Sbjct: 194 HAKNAL 199
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+I Y + L+I+DQL LP ++ + I + +D + AIK M+VRGAPAIAIV L L V
Sbjct: 2 SLQAIKYFDNQLQIIDQLQLPFVTEYIPIRSAQDGWYAIKEMRVRGAPAIAIVAILSLAV 61
Query: 63 DIKD 66
++ +
Sbjct: 62 ELNE 65
>gi|344283249|ref|XP_003413385.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Loxodonta
africana]
Length = 326
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V + L +LV+ARPTAVNM RAA + ++++ A+ + V+ R+I+ E MLEKD+
Sbjct: 46 FVNDSLSFLVTARPTAVNMARAARDLADAVAQEAEREGATEEAVRERVIRYAEDMLEKDL 105
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA L+ PG K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 106 KDNRSIGDLGAHHLLKRAAPGGGKVTVLTHCNTGALATAGYGTALGVIRSLHRLGRLEHT 165
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 166 FCTETRPYNQGAR 178
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+I+ E MLEKD+ DN++IG GA L+ P K+ VLTHCNTG+LATA YGTALGV
Sbjct: 93 VIRYAEDMLEKDLKDNRSIGDLGAHHLLKRAAPGGGKVTVLTHCNTGALATAGYGTALGV 152
Query: 133 IRSLH 137
IRSLH
Sbjct: 153 IRSLH 157
>gi|313471372|sp|C5GGE5.1|MTNA_AJEDR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|239611749|gb|EEQ88736.1| S-methyl-5-thioribose-1-phosphate isomerase [Ajellomyces
dermatitidis ER-3]
gi|327348236|gb|EGE77093.1| S-methyl-5-thioribose-1-phosphate isomerase [Ajellomyces
dermatitidis ATCC 18188]
Length = 392
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 95/150 (63%), Gaps = 14/150 (9%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLI 208
P+ +E ++ EKL+YLVS+RPTAVN+ AA + +S A+ V+ V I
Sbjct: 74 PEPKEVEVFIREKLEYLVSSRPTAVNLAEAAGRLGGIVSAKAEVRGVDGREVAEAYIAAA 133
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVS----------KLNVLTHCNTGSLATAEYGT 258
+ MLE D+ DN+AIG GA+ + L GV+ K+ VLTHCNTGSLATA YGT
Sbjct: 134 QRMLEDDVKDNRAIGEFGARWV--LENGVATGSESGSEKGKVAVLTHCNTGSLATAGYGT 191
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH + AYCTETRPYNQG+R
Sbjct: 192 ALGVIRSLHATGSLERAYCTETRPYNQGSR 221
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 93/204 (45%), Gaps = 64/204 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLAAITYTRGSLSILNQLLLPHQTTYDPLHSACDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIK------D 66
G LG +V K D
Sbjct: 62 ELDALAANNQLSPEPKEVEVFIREKLEYLVSSRPTAVNLAEAAGRLGGIVSAKAEVRGVD 121
Query: 67 KQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID--------LNPRVSKLNVLTHCNT 118
+ I + MLE D+ DN+AIG GA+ +++ K+ VLTHCNT
Sbjct: 122 GREVAEAYIAAAQRMLEDDVKDNRAIGEFGARWVLENGVATGSESGSEKGKVAVLTHCNT 181
Query: 119 GSLATAEYGTALGVIRSLHGANKI 142
GSLATA YGTALGVIRSLH +
Sbjct: 182 GSLATAGYGTALGVIRSLHATGSL 205
>gi|303316299|ref|XP_003068154.1| methylthioribose-1-phosphate isomerase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|313471369|sp|C5PBM5.1|MTNA_COCP7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|240107830|gb|EER26009.1| methylthioribose-1-phosphate isomerase, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|392867739|gb|EAS29011.2| methylthioribose-1-phosphate isomerase [Coccidioides immitis RS]
Length = 390
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
Y+ EKLDYL ++RPTAVN+ + +KS L + + + + I E+ML D+
Sbjct: 84 YIEEKLDYLATSRPTAVNLSDSVRKMKSVLEQKTRTLTCSGEEIAMSFIAYAENMLVHDV 143
Query: 217 SDNKAIGRNGAQALIDLNP-GV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DN++IG +GA ++ P GV SKL +LTHCNTGSLATA YGTALG+IR LH +++
Sbjct: 144 ADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLATAGYGTALGIIRHLHEKSQLC 203
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQGAR
Sbjct: 204 HAYCTETRPYNQGAR 218
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 59/194 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y++ L I+DQLLLPH ++ + I + ED + +IK M VRGAPAIAIV L L V
Sbjct: 4 ALEAIRYKRGHLLIIDQLLLPHVTRFIPIRSAEDGWHSIKEMHVRGAPAIAIVAMLSLAV 63
Query: 63 DIK--------DKQFPDNEL----------------------IQLIESMLEK-------- 84
++ K D + ++ ++S+LE+
Sbjct: 64 EMSGLVSQQKISKNAEDTRVYIEEKLDYLATSRPTAVNLSDSVRKMKSVLEQKTRTLTCS 123
Query: 85 ------------------DISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
D++DN++IG +GA ++ P SKL +LTHCNTGSLAT
Sbjct: 124 GEEIAMSFIAYAENMLVHDVADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLAT 183
Query: 124 AEYGTALGVIRSLH 137
A YGTALG+IR LH
Sbjct: 184 AGYGTALGIIRHLH 197
>gi|115484735|ref|NP_001067511.1| Os11g0216900 [Oryza sativa Japonica Group]
gi|122227930|sp|Q0ITU1.1|MTNA_ORYSJ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName: Full=Protein IRON
DEFICIENCY INDUCIBLE 2; Short=OsIDI2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|113644733|dbj|BAF27874.1| Os11g0216900 [Oryza sativa Japonica Group]
gi|122936797|tpd|FAA00313.1| TPA: eukaryotic translation initiation factor 2B-like putative
methylthioribose-1-phosphate isomerase [Oryza sativa
Japonica Group]
gi|222615724|gb|EEE51856.1| hypothetical protein OsJ_33377 [Oryza sativa Japonica Group]
Length = 374
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDIS 217
+V EKL+YLVS+RPTAVN+ AA ++S +S A+ + I E+ML D+S
Sbjct: 83 FVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAKAIFQAYIDAAETMLVDDVS 142
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
DNKAIG +GA+ L ++VLTHCNTGSLATA YGTALGVIR+LH + A+C
Sbjct: 143 DNKAIGSHGAEFLKQKLEVSKDISVLTHCNTGSLATAGYGTALGVIRALHSGGILEKAFC 202
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 203 TETRPFNQGSR 213
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 90/190 (47%), Gaps = 54/190 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR------------- 47
+ +LQSI+Y + SL++LDQ LP +D+ D + AI+ M VR
Sbjct: 4 LGALQSIVYHRGSLRLLDQRKLPLEVDYIDVKCSGDGWNAIRDMVVRGAPAIAIAAALAL 63
Query: 48 -----------GAPAIA----------IVGCLGLVVDI------------------KDKQ 68
G PA A +V V++ KD +
Sbjct: 64 AVEVSGLEDFTGTPAEAAVFVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAK 123
Query: 69 FPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYG 127
I E+ML D+SDNKAIG +GA+ + VSK ++VLTHCNTGSLATA YG
Sbjct: 124 AIFQAYIDAAETMLVDDVSDNKAIGSHGAE-FLKQKLEVSKDISVLTHCNTGSLATAGYG 182
Query: 128 TALGVIRSLH 137
TALGVIR+LH
Sbjct: 183 TALGVIRALH 192
>gi|313471327|sp|A2ZCP0.1|MTNA_ORYSI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|125533826|gb|EAY80374.1| hypothetical protein OsI_35550 [Oryza sativa Indica Group]
Length = 374
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDIS 217
+V EKL+YLVS+RPTAVN+ AA ++S +S A+ + I E+ML D+S
Sbjct: 83 FVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAKAIFQAYIDAAETMLVDDVS 142
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
DNKAIG +GA+ L ++VLTHCNTGSLATA YGTALGVIR+LH + A+C
Sbjct: 143 DNKAIGSHGAEFLKQKLEVSKDISVLTHCNTGSLATAGYGTALGVIRALHSGGILEKAFC 202
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 203 TETRPFNQGSR 213
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 90/190 (47%), Gaps = 54/190 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR------------- 47
+ +LQSI+Y + SL++LDQ LP +D+ D + AI+ M VR
Sbjct: 4 LGALQSIVYHRGSLRLLDQRKLPLEVDYIDVKCSGDGWNAIRDMVVRGAPAIAIAAALAL 63
Query: 48 -----------GAPAIA----------IVGCLGLVVDI------------------KDKQ 68
G PA A +V V++ KD +
Sbjct: 64 AVEVSGLEDFTGTPAEAAAFVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAK 123
Query: 69 FPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYG 127
I E+ML D+SDNKAIG +GA+ + VSK ++VLTHCNTGSLATA YG
Sbjct: 124 AIFQAYIDAAETMLVDDVSDNKAIGSHGAE-FLKQKLEVSKDISVLTHCNTGSLATAGYG 182
Query: 128 TALGVIRSLH 137
TALGVIR+LH
Sbjct: 183 TALGVIRALH 192
>gi|290992795|ref|XP_002679019.1| predicted protein [Naegleria gruberi]
gi|313471368|sp|D2VAA9.1|MTNA_NAEGR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|284092634|gb|EFC46275.1| predicted protein [Naegleria gruberi]
Length = 380
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 95/154 (61%), Gaps = 7/154 (4%)
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN 198
AN+++ D D ++ K EKLD L +RPTAVN+ +A K+ + A++ N
Sbjct: 69 ANQLLQSNDALLADASAIAKLFNEKLDRLAESRPTAVNLFQAVGDFKNKI---AQSLETN 125
Query: 199 TVKTRLIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATA 254
T ++QLI E+++ +DI +N I G+ +I NP + L VLTHCNTG+LAT
Sbjct: 126 KTGTEIVQLIIDEAEALMNRDIEENAKISECGSDHIISTNPSSTTLKVLTHCNTGALATM 185
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+YGTALGVIR L N + A+CTETRPYNQGAR
Sbjct: 186 KYGTALGVIRFLQKKNVLEHAFCTETRPYNQGAR 219
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 94/194 (48%), Gaps = 56/194 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLL+P + ++ E A+ AI+ M+VRGAPAIAIV L L V
Sbjct: 8 TLEAIKYTRGSLEILDQLLIPKSFIYEVVDTTEKAFHAIRDMKVRGAPAIAIVAVLTLAV 67
Query: 63 ---------------------------------------------DIKDK-------QFP 70
D K+K
Sbjct: 68 EANQLLQSNDALLADASAIAKLFNEKLDRLAESRPTAVNLFQAVGDFKNKIAQSLETNKT 127
Query: 71 DNELIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEY 126
E++QLI E+++ +DI +N I G+ +I NP + L VLTHCNTG+LAT +Y
Sbjct: 128 GTEIVQLIIDEAEALMNRDIEENAKISECGSDHIISTNPSSTTLKVLTHCNTGALATMKY 187
Query: 127 GTALGVIRSLHGAN 140
GTALGVIR L N
Sbjct: 188 GTALGVIRFLQKKN 201
>gi|119176870|ref|XP_001240294.1| hypothetical protein CIMG_07457 [Coccidioides immitis RS]
Length = 326
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
Y+ EKLDYL ++RPTAVN+ + +KS L + + + + I E+ML D+
Sbjct: 20 YIEEKLDYLATSRPTAVNLSDSVRKMKSVLEQKTRTLTCSGEEIAMSFIAYAENMLVHDV 79
Query: 217 SDNKAIGRNGAQALIDLNP-GV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DN++IG +GA ++ P GV SKL +LTHCNTGSLATA YGTALG+IR LH +++
Sbjct: 80 ADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLATAGYGTALGIIRHLHEKSQLC 139
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQGAR
Sbjct: 140 HAYCTETRPYNQGAR 154
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLATAEYGTAL 130
I E+ML D++DN++IG +GA ++ P SKL +LTHCNTGSLATA YGTAL
Sbjct: 67 FIAYAENMLVHDVADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLATAGYGTAL 126
Query: 131 GVIRSLH 137
G+IR LH
Sbjct: 127 GIIRHLH 133
>gi|162459748|ref|NP_001105275.1| methylthioribose-1-phosphate isomerase [Zea mays]
gi|52699545|gb|AAU86895.1| isopentenyl-diphosphate delta isomerase 2 [Zea mays]
Length = 367
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDN-DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTV 200
V++ D F + +V +KL+YLVS+RPTAVN+ AA +++ +S+ A+ A ++
Sbjct: 65 VEVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSI 124
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTAL
Sbjct: 125 FQVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTAL 184
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR+LH + A+CTETRP+NQG+R
Sbjct: 185 GVIRALHSGGVLEKAFCTETRPFNQGSR 212
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 93/186 (50%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQSI+Y + SL++LDQ LP + +D+ + D + AI+ M VRGAPAIAI L L V
Sbjct: 6 ALQSIVYSRGSLRLLDQRKLPLEMEYIDVKSSADGWNAIRDMVVRGAPAIAIAAALALAV 65
Query: 63 DIKDKQF---PDNE---------------------------------------------- 73
++ D F P+
Sbjct: 66 EVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSIF 125
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTALG
Sbjct: 126 QVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTALG 185
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 186 VIRALH 191
>gi|313471343|sp|B6TZD1.1|MTNA_MAIZE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName: Full=Protein IRON
DEFICIENCY INDUCIBLE 2; Short=ZmIDI2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|195645992|gb|ACG42464.1| methylthioribose-1-phosphate isomerase [Zea mays]
gi|413920649|gb|AFW60581.1| methylthioribose-1-phosphate isomerase isoform 1 [Zea mays]
gi|413920650|gb|AFW60582.1| methylthioribose-1-phosphate isomerase isoform 2 [Zea mays]
Length = 367
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDN-DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTV 200
V++ D F + +V +KL+YLVS+RPTAVN+ AA +++ +S+ A+ A ++
Sbjct: 65 VEVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSI 124
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTAL
Sbjct: 125 FQVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTAL 184
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR+LH + A+CTETRP+NQG+R
Sbjct: 185 GVIRALHSGGVLEKAFCTETRPFNQGSR 212
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 93/186 (50%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQSI+Y + SL++LDQ LP + +D+ + D + AI+ M VRGAPAIAI L L V
Sbjct: 6 ALQSIVYSRGSLRLLDQRKLPLEMEYIDVKSSADGWNAIRDMVVRGAPAIAIAAALALAV 65
Query: 63 DIKDKQF---PDNE---------------------------------------------- 73
++ D F P+
Sbjct: 66 EVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSIF 125
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTALG
Sbjct: 126 QVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTALG 185
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 186 VIRALH 191
>gi|195636806|gb|ACG37871.1| methylthioribose-1-phosphate isomerase [Zea mays]
Length = 367
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDN-DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTV 200
V++ D F + +V +KL+YLVS+RPTAVN+ AA +++ +S+ A+ A ++
Sbjct: 65 VEVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSI 124
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTAL
Sbjct: 125 FQVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTAL 184
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR+LH + A+CTETRP+NQG+R
Sbjct: 185 GVIRALHSGGVLEKAFCTETRPFNQGSR 212
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 93/186 (50%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQSI+Y + SL++LDQ LP + +D+ + D + AI+ M VRGAPAIAI L L V
Sbjct: 6 ALQSIVYSRGSLRLLDQRKLPLEMEYIDVKSSADGWNAIRDMVVRGAPAIAIAAALALAV 65
Query: 63 DIKDKQF---PDNE---------------------------------------------- 73
++ D F P+
Sbjct: 66 EVSDLDFIGTPEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQTLVSKAAETAKDSKSIF 125
Query: 74 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ E+ML D++DNKAIG +GA L K++VLTHCNTGSLATA YGTALG
Sbjct: 126 QVYIEAAETMLVDDVADNKAIGSHGAVFLQRQLANSKKISVLTHCNTGSLATAGYGTALG 185
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 186 VIRALH 191
>gi|320032547|gb|EFW14500.1| methylthioribose-1-phosphate isomerase [Coccidioides posadasii str.
Silveira]
Length = 356
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
Y+ EKLDYL ++RPTAVN+ + +KS L + + + + I E+ML D+
Sbjct: 40 YIEEKLDYLATSRPTAVNLSDSVRKMKSVLEQKTRTLTCSGEEIAMSFIAYAENMLVHDV 99
Query: 217 SDNKAIGRNGAQALIDLNP-GV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DN++IG +GA ++ P GV SKL +LTHCNTGSLATA YGTALG+IR LH +++
Sbjct: 100 ADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLATAGYGTALGIIRHLHEKSQLC 159
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQGAR
Sbjct: 160 HAYCTETRPYNQGAR 174
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLATAEYGTAL 130
I E+ML D++DN++IG +GA ++ P SKL +LTHCNTGSLATA YGTAL
Sbjct: 87 FIAYAENMLVHDVADNRSIGEHGANWIVANTPSGVEDSKLCILTHCNTGSLATAGYGTAL 146
Query: 131 GVIRSLH 137
G+IR LH
Sbjct: 147 GIIRHLH 153
>gi|313471300|sp|C0P108.1|MTNA_AJECG RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|225554345|gb|EEH02644.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 392
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 11/144 (7%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIESMLE 213
+E + EKL++LVS+RPTAVN+ AA + ++ A+ V N V I+ E MLE
Sbjct: 79 VELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVGGNEVAEAYIEAAERMLE 138
Query: 214 KDISDNKAIGRNGAQALIDL---------NPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
D+ DN+AIG +GA+ +++ G +K+ VLTHCNTGSLATA YGTALGVIR
Sbjct: 139 DDVRDNRAIGESGAKWVLEHAITTKGSMSGTGQAKVAVLTHCNTGSLATAGYGTALGVIR 198
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
SLH + AYCTETRPYNQG+R
Sbjct: 199 SLHATGSLERAYCTETRPYNQGSR 222
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 101/205 (49%), Gaps = 65/205 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLVAITYTRGSLHILNQLLLPHQTTYDPLHSARDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIKDK--QFP 70
G LG +V+ + +
Sbjct: 62 ELHTLATNNQLSAEPKDVELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVG 121
Query: 71 DNEL----IQLIESMLEKDISDNKAIGRNGAQALID--LNPRVS-------KLNVLTHCN 117
NE+ I+ E MLE D+ DN+AIG +GA+ +++ + + S K+ VLTHCN
Sbjct: 122 GNEVAEAYIEAAERMLEDDVRDNRAIGESGAKWVLEHAITTKGSMSGTGQAKVAVLTHCN 181
Query: 118 TGSLATAEYGTALGVIRSLHGANKI 142
TGSLATA YGTALGVIRSLH +
Sbjct: 182 TGSLATAGYGTALGVIRSLHATGSL 206
>gi|261201256|ref|XP_002627028.1| S-methyl-5-thioribose-1-phosphate isomerase [Ajellomyces
dermatitidis SLH14081]
gi|313471371|sp|C5JGS0.1|MTNA_AJEDS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|239592087|gb|EEQ74668.1| S-methyl-5-thioribose-1-phosphate isomerase [Ajellomyces
dermatitidis SLH14081]
Length = 392
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 10/148 (6%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLI 208
P+ +E ++ EKL+YLVS+RPTAVN+ AA + +S A+ V+ V I
Sbjct: 74 PEPKEVEVFIREKLEYLVSSRPTAVNLAEAAGRLGGIVSAKAEVRGVDGREVAEAYIAAA 133
Query: 209 ESMLEKDISDNKAIGRNGAQALID--LNPGV------SKLNVLTHCNTGSLATAEYGTAL 260
+ MLE D+ DN+AIG GA+ +++ + G K+ VLTHCNTGSLATA YGTAL
Sbjct: 134 QRMLEDDVKDNRAIGEFGARWVLENAVATGSESGSEKGKVAVLTHCNTGSLATAGYGTAL 193
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIRSLH + AYCTETRPYNQG+R
Sbjct: 194 GVIRSLHATGSLERAYCTETRPYNQGSR 221
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 93/204 (45%), Gaps = 64/204 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLAAITYTRGSLSILNQLLLPHQTTYDPLHSACDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIK------D 66
G LG +V K D
Sbjct: 62 ELDALAANNQLSPEPKEVEVFIREKLEYLVSSRPTAVNLAEAAGRLGGIVSAKAEVRGVD 121
Query: 67 KQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID--------LNPRVSKLNVLTHCNT 118
+ I + MLE D+ DN+AIG GA+ +++ K+ VLTHCNT
Sbjct: 122 GREVAEAYIAAAQRMLEDDVKDNRAIGEFGARWVLENAVATGSESGSEKGKVAVLTHCNT 181
Query: 119 GSLATAEYGTALGVIRSLHGANKI 142
GSLATA YGTALGVIRSLH +
Sbjct: 182 GSLATAGYGTALGVIRSLHATGSL 205
>gi|449295224|gb|EMC91246.1| hypothetical protein BAUCODRAFT_319460 [Baudoinia compniacensis
UAMH 10762]
Length = 389
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESM 211
+ + ++ EKLDYLV++RPTAVN+ AA +K + AK +S + VK M
Sbjct: 73 EEVSAFIIEKLDYLVTSRPTAVNLADAARKLKKIVESAAKHASSTGDAVKKAYCDAAAQM 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L D++DN+ IG+ GA A I+ G +++VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LISDVADNQGIGKYGA-AWIEQQAGGGQVSVLTHCNTGSLATAGYGTALGVIRSLHANGS 191
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 192 LKRAFCTETRPYNQGSR 208
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 95/186 (51%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y+ SL+IL+QL LPH + ++ N D + AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LEAIRYKPGSLQILNQLKLPHQEEYDEVKNSTDGWHAIKEMRTRGAPAIAIVAALSLAVE 62
Query: 64 IKDKQFPDN------------------------------ELIQLIES------------- 80
++ D +L +++ES
Sbjct: 63 LQTGAVSDQAEEVSAFIIEKLDYLVTSRPTAVNLADAARKLKKIVESAAKHASSTGDAVK 122
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
ML D++DN+ IG+ GA A I+ +++VLTHCNTGSLATA YGTALG
Sbjct: 123 KAYCDAAAQMLISDVADNQGIGKYGA-AWIEQQAGGGQVSVLTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLH 137
VIRSLH
Sbjct: 182 VIRSLH 187
>gi|410950622|ref|XP_003982003.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase [Felis catus]
Length = 369
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
+V + L +LV+ARPTAVN+ RAA + + + A+ TV+ R+I E MLEKD+
Sbjct: 78 FVRDALSFLVTARPTAVNLARAASQLADAAALEAEREGATEETVRERVICCAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA L++ + PG K+ VLTHCNTG+LATA YGTALGVIR+LH ++ A
Sbjct: 138 RDNRSIGDLGAHHLLEQVAPGGGKVTVLTHCNTGALATAGYGTALGVIRALHTLGRLDHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 104/193 (53%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 ALEAIRYSRGSLEILDQLLLPQHSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIK----------DKQFPDNELIQLI-------------------------------ESM 81
+++ F + L L+ E++
Sbjct: 62 ELQAGAGGPGLAALLAFVRDALSFLVTARPTAVNLARAASQLADAAALEAEREGATEETV 121
Query: 82 LEK-----------DISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
E+ D+ DN++IG GA L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCAEDMLEKDLRDNRSIGDLGAHHLLEQVAPGGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIR+LH ++
Sbjct: 182 LGVIRALHTLGRL 194
>gi|75168674|sp|Q9AYT7.1|MTNA_HORVU RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName: Full=Protein IRON
DEFICIENCY INDUCIBLE 2; Short=HvIDI2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|12407304|dbj|BAB21393.1| IDI2 [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
Query: 143 VDIKDKQFPDNDS-LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTV 200
V++ D F + +V +KL+YLVS+RPTAVN+ AA +++ +S A+ A ++
Sbjct: 65 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 124
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTA 259
I+ E+ML D++DNKAIG +GA+ + G SK ++VLTHCNTGSLATA YGTA
Sbjct: 125 FQVFIEAAETMLVDDVADNKAIGLHGAE-FLQRQLGSSKNISVLTHCNTGSLATAGYGTA 183
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR+LH + A+CTETRP+NQG+R
Sbjct: 184 LGVIRALHSGGVLEKAFCTETRPFNQGSR 212
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 88/186 (47%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------- 47
+LQSI+Y + +L++LDQ LP VD+ + D + AI+ M VR
Sbjct: 6 ALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGAPAIAIAAALSLAV 65
Query: 48 --------GAPAIA----------IVGCLGLVVDI------------------KDKQFPD 71
G PA A +V V++ KD +
Sbjct: 66 EVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIF 125
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ E+ML D++DNKAIG +GA+ L ++VLTHCNTGSLATA YGTALG
Sbjct: 126 QVFIEAAETMLVDDVADNKAIGLHGAEFLQRQLGSSKNISVLTHCNTGSLATAGYGTALG 185
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 186 VIRALH 191
>gi|326503502|dbj|BAJ86257.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511176|dbj|BAJ87602.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
Query: 143 VDIKDKQFPDNDS-LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTV 200
V++ D F + +V +KL+YLVS+RPTAVN+ AA +++ +S A+ A ++
Sbjct: 65 VEVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSI 124
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTA 259
I+ E+ML D++DNKAIG +GA+ + G SK ++VLTHCNTGSLATA YGTA
Sbjct: 125 FQVFIEAAETMLVDDVADNKAIGLHGAE-FLQRQLGSSKNISVLTHCNTGSLATAGYGTA 183
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR+LH + A+CTETRP+NQG+R
Sbjct: 184 LGVIRALHSGGVLEKAFCTETRPFNQGSR 212
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 88/186 (47%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------- 47
+LQSI+Y + +L++LDQ LP VD+ + D + AI+ M VR
Sbjct: 6 ALQSILYGRGALRLLDQRKLPLEEVYVDVKDSADGWNAIRDMVVRGAPAIAIAAALSLAV 65
Query: 48 --------GAPAIA----------IVGCLGLVVDI------------------KDKQFPD 71
G PA A +V V++ KD +
Sbjct: 66 EVNDHNFIGTPAEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVSTTAETAKDAKSIF 125
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
I+ E+ML D++DNKAIG +GA+ L ++VLTHCNTGSLATA YGTALG
Sbjct: 126 QVFIEAAETMLVDDVADNKAIGLHGAEFLQRQLGSSKNISVLTHCNTGSLATAGYGTALG 185
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 186 VIRALH 191
>gi|402904471|ref|XP_003915067.1| PREDICTED: methylthioribose-1-phosphate isomerase isoform 1 [Papio
anubis]
Length = 369
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + + A+ V+ R+I+ E MLEKD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADAAAREAEREGATEEAVRERVIRCAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADAAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|240273225|gb|EER36747.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 329
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 11/144 (7%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIESMLE 213
+E + EKL++LVS+RPTAVN+ AA + ++ A+ V N V I+ E MLE
Sbjct: 79 VELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVGGNEVAEAYIEAAERMLE 138
Query: 214 KDISDNKAIGRNGAQALIDL---------NPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
D+ DN+AIG +GA+ +++ G +K+ VLTHCNTGSLATA YGTALGVIR
Sbjct: 139 DDVRDNRAIGESGAKWVLEHAITTKGSMSGTGQAKVAVLTHCNTGSLATAGYGTALGVIR 198
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
SLH + AYCTETRPYNQG+R
Sbjct: 199 SLHATGSLERAYCTETRPYNQGSR 222
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 101/205 (49%), Gaps = 65/205 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLVAITYTRGSLHILNQLLLPHQTTYDPLHSARDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIKDK--QFP 70
G LG +V+ + +
Sbjct: 62 ELHTLATNNQLSAEPKDVELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVG 121
Query: 71 DNEL----IQLIESMLEKDISDNKAIGRNGAQALID--LNPRVS-------KLNVLTHCN 117
NE+ I+ E MLE D+ DN+AIG +GA+ +++ + + S K+ VLTHCN
Sbjct: 122 GNEVAEAYIEAAERMLEDDVRDNRAIGESGAKWVLEHAITTKGSMSGTGQAKVAVLTHCN 181
Query: 118 TGSLATAEYGTALGVIRSLHGANKI 142
TGSLATA YGTALGVIRSLH +
Sbjct: 182 TGSLATAGYGTALGVIRSLHATGSL 206
>gi|325089252|gb|EGC42562.1| translation initiation factor [Ajellomyces capsulatus H88]
Length = 394
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 11/144 (7%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIESMLE 213
+E + EKL++LVS+RPTAVN+ AA + ++ A+ V N V I+ E MLE
Sbjct: 79 VELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVGGNEVAEAYIEAAERMLE 138
Query: 214 KDISDNKAIGRNGAQALIDL---------NPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
D+ DN+AIG +GA+ +++ G +K+ VLTHCNTGSLATA YGTALGVIR
Sbjct: 139 DDVRDNRAIGESGAKWVLEHAITTKGSMSGMGQAKVAVLTHCNTGSLATAGYGTALGVIR 198
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
SLH + AYCTETRPYNQG+R
Sbjct: 199 SLHATGSLERAYCTETRPYNQGSR 222
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 101/205 (49%), Gaps = 65/205 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLVAITYTRGSLHILNQLLLPHQTTYDPLHSARDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIKDK--QFP 70
G LG +V+ + +
Sbjct: 62 ELHTLATNNQLSAEPKDVELLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVG 121
Query: 71 DNEL----IQLIESMLEKDISDNKAIGRNGAQALID--LNPRVS-------KLNVLTHCN 117
NE+ I+ E MLE D+ DN+AIG +GA+ +++ + + S K+ VLTHCN
Sbjct: 122 GNEVAEAYIEAAERMLEDDVRDNRAIGESGAKWVLEHAITTKGSMSGMGQAKVAVLTHCN 181
Query: 118 TGSLATAEYGTALGVIRSLHGANKI 142
TGSLATA YGTALGVIRSLH +
Sbjct: 182 TGSLATAGYGTALGVIRSLHATGSL 206
>gi|108864141|gb|ABA92066.2| Initiation factor 2 subunit family protein, expressed [Oryza sativa
Japonica Group]
gi|108864142|gb|ABA92067.2| Initiation factor 2 subunit family protein, expressed [Oryza sativa
Japonica Group]
Length = 508
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDIS 217
+V EKL+YLVS+RPTAVN+ AA ++S +S A+ + I E+ML D+S
Sbjct: 217 FVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAKAIFQAYIDAAETMLVDDVS 276
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
DNKAIG +GA+ L ++VLTHCNTGSLATA YGTALGVIR+LH + A+C
Sbjct: 277 DNKAIGSHGAEFLKQKLEVSKDISVLTHCNTGSLATAGYGTALGVIRALHSGGILEKAFC 336
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 337 TETRPFNQGSR 347
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 90/190 (47%), Gaps = 54/190 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR------------- 47
+ +LQSI+Y + SL++LDQ LP +D+ D + AI+ M VR
Sbjct: 138 LGALQSIVYHRGSLRLLDQRKLPLEVDYIDVKCSGDGWNAIRDMVVRGAPAIAIAAALAL 197
Query: 48 -----------GAPAIA----------IVGCLGLVVDI------------------KDKQ 68
G PA A +V V++ KD +
Sbjct: 198 AVEVSGLEDFTGTPAEAAVFVSEKLEYLVSSRPTAVNLSDAATKLRSLVSRTAETEKDAK 257
Query: 69 FPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYG 127
I E+ML D+SDNKAIG +GA+ + VSK ++VLTHCNTGSLATA YG
Sbjct: 258 AIFQAYIDAAETMLVDDVSDNKAIGSHGAE-FLKQKLEVSKDISVLTHCNTGSLATAGYG 316
Query: 128 TALGVIRSLH 137
TALGVIR+LH
Sbjct: 317 TALGVIRALH 326
>gi|297831660|ref|XP_002883712.1| eukaryotic translation initiation factor 2B family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297329552|gb|EFH59971.1| eukaryotic translation initiation factor 2B family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 369
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++ +KLDYLVS+RPTAVN+ AA +K +++ A A+ ++ I+ E MLE D++
Sbjct: 85 FLEKKLDYLVSSRPTAVNLADAALKLKQVIAKALAIATEPKSIFKVYIEAAEDMLEDDVA 144
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG G+ L KL+VLTHCNTGSLATA YGTALGVIR+LH + AYC
Sbjct: 145 SNKAIGTFGSSLLRQQAKNADKLSVLTHCNTGSLATAGYGTALGVIRALHAQGILERAYC 204
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 205 TETRPFNQGSR 215
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 45/63 (71%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E MLE D++ NKAIG G+ L KL+VLTHCNTGSLATA YGTALGVIR
Sbjct: 132 IEAAEDMLEDDVASNKAIGTFGSSLLRQQAKNADKLSVLTHCNTGSLATAGYGTALGVIR 191
Query: 135 SLH 137
+LH
Sbjct: 192 ALH 194
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+L++I Y+ SL++LDQ LP + ++I + D + AI+ M VRGA
Sbjct: 8 TLKAICYKPGSLQLLDQRKLPLETIYLEIRDASDGWSAIQEMVVRGA 54
>gi|359322226|ref|XP_003639811.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase [Canis lupus familiaris]
Length = 369
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/136 (53%), Positives = 96/136 (70%), Gaps = 3/136 (2%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLE 213
L +V + L +LV+ARPTAVNM RAA + + + A+ + V+ R+I+ E MLE
Sbjct: 75 LVAFVRDALSFLVTARPTAVNMARAARHLADAAALEAERDGATEEAVRERVIRCAEDMLE 134
Query: 214 KDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
KD+ DN++IG GA+ L++ PG K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 135 KDLKDNRSIGDLGARHLLERAAPGGGKVTVLTHCNTGALATAGYGTALGVIRSLHTLGRL 194
Query: 273 GAAYCTETRPYNQGAR 288
A+CTETRPYNQGAR
Sbjct: 195 DHAFCTETRPYNQGAR 210
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 104/193 (53%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L
Sbjct: 2 ALEAIRYSRGSLEILDQLLLPQRSRYEPVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 61 --------------VVDIKD------------------------------------KQFP 70
V ++D ++
Sbjct: 62 ELQAGAGGPGPAALVAFVRDALSFLVTARPTAVNMARAARHLADAAALEAERDGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLKDNRSIGDLGARHLLERAAPGGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHTLGRL 194
>gi|452980274|gb|EME80035.1| hypothetical protein MYCFIDRAFT_204427 [Pseudocercospora fijiensis
CIRAD86]
Length = 385
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ + ++ EKLDYLV++RPTAVN+ A +K ++ A S N +V ++M
Sbjct: 73 EEVAAFIVEKLDYLVTSRPTAVNLADAVGKLKKIVTSAAAISDANGDSVSKTYCDAAQAM 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L D+SDNK IG+ GA+ I+ G +++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LAADVSDNKGIGKYGAE-WIEKVAGGGQVSVVTHCNTGSLATAGYGTALGVIRSLHANGS 191
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 192 LKHAFCTETRPYNQGSR 208
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 93/186 (50%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y SL+IL+QL LPH + ++ ED + AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LEAIRYAPCSLQILNQLKLPHQEEYDEVKTAEDGWHAIKDMRTRGAPAIAIVAALSLAVE 62
Query: 64 IKDKQFPD--NELIQLI------------------------------------------- 78
+ + + D E+ I
Sbjct: 63 LSNNKTSDKAEEVAAFIVEKLDYLVTSRPTAVNLADAVGKLKKIVTSAAAISDANGDSVS 122
Query: 79 -------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++ML D+SDNK IG+ GA+ I+ +++V+THCNTGSLATA YGTALG
Sbjct: 123 KTYCDAAQAMLAADVSDNKGIGKYGAE-WIEKVAGGGQVSVVTHCNTGSLATAGYGTALG 181
Query: 132 VIRSLH 137
VIRSLH
Sbjct: 182 VIRSLH 187
>gi|396458172|ref|XP_003833699.1| hypothetical protein LEMA_P064600.1 [Leptosphaeria maculans JN3]
gi|312210247|emb|CBX90334.1| hypothetical protein LEMA_P064600.1 [Leptosphaeria maculans JN3]
Length = 479
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 94/139 (67%), Gaps = 4/139 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ ++ +V EKLDYLV++RPTAVN+ AA ++ E A + +V+ I E M
Sbjct: 160 EEVKVFVTEKLDYLVTSRPTAVNLADAAGKLRRITEETAARDGADGESVREAYIAAAEQM 219
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
L D+SDN+ IG++GA+ + P K +++LTHCNTGSLATA YGTALGVIRSLH A
Sbjct: 220 LIDDVSDNQNIGKHGAEWIAKNTPAGQKGPVSMLTHCNTGSLATAGYGTALGVIRSLHAA 279
Query: 270 NKIGAAYCTETRPYNQGAR 288
+ A+C+ETRPYNQG+R
Sbjct: 280 GSLKHAFCSETRPYNQGSR 298
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 91/196 (46%), Gaps = 60/196 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP------------- 50
LQ+I Y + L+ILDQL LPH+ + + + DA+ AIK M+ RGAP
Sbjct: 90 LQAIKYSRGRLEILDQLKLPHSEEYDSMYSSTDAWHAIKDMRTRGAPAIAIVAALALAVE 149
Query: 51 -------AIA-------------IVGCLGLVVDIKDKQFPDNELIQLIESMLEKDISDNK 90
+IA +V V++ D +L ++ E +D +D +
Sbjct: 150 LANMKLSSIAEEVKVFVTEKLDYLVTSRPTAVNLADAA---GKLRRITEETAARDGADGE 206
Query: 91 AI----------------------GRNGAQALIDLNPRVSK--LNVLTHCNTGSLATAEY 126
++ G++GA+ + P K +++LTHCNTGSLATA Y
Sbjct: 207 SVREAYIAAAEQMLIDDVSDNQNIGKHGAEWIAKNTPAGQKGPVSMLTHCNTGSLATAGY 266
Query: 127 GTALGVIRSLHGANKI 142
GTALGVIRSLH A +
Sbjct: 267 GTALGVIRSLHAAGSL 282
>gi|109123691|ref|XP_001111047.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Macaca
mulatta]
Length = 356
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
+V +KL +LV++RPTAVNM RAA + + + A+ V+ R+I+ E MLEKD+
Sbjct: 78 FVRDKLSFLVTSRPTAVNMARAARDLADAAAREAEREGATEEAVRERVIRCAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTSRPTAVNMARAARDLADAAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|154278838|ref|XP_001540232.1| hypothetical protein HCAG_04072 [Ajellomyces capsulatus NAm1]
gi|313471301|sp|A6R364.1|MTNA_AJECN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|150412175|gb|EDN07562.1| hypothetical protein HCAG_04072 [Ajellomyces capsulatus NAm1]
Length = 391
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 91/137 (66%), Gaps = 10/137 (7%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIESMLEKDISDN 219
EKL++LVS+RPTAVN+ AA + ++ A+ V N V I+ E ML+ D+ DN
Sbjct: 85 EKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVGGNEVAEAYIEAAERMLDDDVRDN 144
Query: 220 KAIGRNGAQALIDL--------NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+AIG +GA+ +++ G +K+ VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 145 RAIGESGAKWVLEHAITKGSISGTGQAKVAVLTHCNTGSLATAGYGTALGVIRSLHATGS 204
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 205 LERAYCTETRPYNQGSR 221
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 121/275 (44%), Gaps = 86/275 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV------- 55
+L +I Y + SL IL+QLLLPH + +++ DA+ AI M+VRGAPAIAIV
Sbjct: 2 TLVAITYTRGSLHILNQLLLPHQTTYDPLHSARDAWHAIHEMRVRGAPAIAIVAALSLAV 61
Query: 56 -------------------------------------------GCLGLVVDIKDK--QFP 70
G LG +V+ + +
Sbjct: 62 ELHTLATSNQLSAEPKDVGQLILEKLEFLVSSRPTAVNLAEAAGRLGRIVNGRAQVQGVG 121
Query: 71 DNEL----IQLIESMLEKDISDNKAIGRNGAQALIDL--------NPRVSKLNVLTHCNT 118
NE+ I+ E ML+ D+ DN+AIG +GA+ +++ +K+ VLTHCNT
Sbjct: 122 GNEVAEAYIEAAERMLDDDVRDNRAIGESGAKWVLEHAITKGSISGTGQAKVAVLTHCNT 181
Query: 119 GSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
GSLATA YGTALGVIRSLH SLE+ Y E Y +R TA +
Sbjct: 182 GSLATAGYGTALGVIRSLHATG--------------SLERAYCTETRPYNQGSRLTAFEL 227
Query: 178 KR-------AADSVKSSLSEWAKASPVNTVKTRLI 205
DS+ ++L A P +V I
Sbjct: 228 VHDNIPATLITDSMAAALLARQSAGPAQSVGVSAI 262
>gi|403302429|ref|XP_003941862.1| PREDICTED: methylthioribose-1-phosphate isomerase [Saimiri
boliviensis boliviensis]
Length = 346
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 97/141 (68%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLI 208
P +L +V +KL +LV+ARPTAVNM RAA + + + A+ V+ R+I+
Sbjct: 41 PGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADAAAREAEREGATEEAVRERVIRCA 100
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E ML+KD+ DN++IG GA+ L+D P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 101 EDMLDKDLRDNQSIGDLGARHLLDRAAPNGGKVAVLTHCNTGALATAGYGTALGVIRSLH 160
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQGAR
Sbjct: 161 SLGRLEHAFCTETRPYNQGAR 181
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 79/157 (50%), Gaps = 53/157 (33%)
Query: 39 QAIKSMQVRGAPAIAIVGCLGLVVD----------------IKDK--------------- 67
Q+ +S++VRGAPAIA+VGCL L V+ ++DK
Sbjct: 9 QSDESLKVRGAPAIALVGCLSLAVELQTGAGGPGLAALVAFVRDKLSFLVTARPTAVNMA 68
Query: 68 ---------------------QFPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNP 105
+ +I+ E ML+KD+ DN++IG GA+ L+D P
Sbjct: 69 RAARDLADAAAREAEREGATEEAVRERVIRCAEDMLDKDLRDNQSIGDLGARHLLDRAAP 128
Query: 106 RVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
K+ VLTHCNTG+LATA YGTALGVIRSLH ++
Sbjct: 129 NGGKVAVLTHCNTGALATAGYGTALGVIRSLHSLGRL 165
>gi|355703214|gb|EHH29705.1| Methylthioribose-1-phosphate isomerase [Macaca mulatta]
gi|380789503|gb|AFE66627.1| methylthioribose-1-phosphate isomerase isoform 1 [Macaca mulatta]
gi|380789505|gb|AFE66628.1| methylthioribose-1-phosphate isomerase isoform 1 [Macaca mulatta]
gi|383414583|gb|AFH30505.1| methylthioribose-1-phosphate isomerase isoform 1 [Macaca mulatta]
gi|383414585|gb|AFH30506.1| methylthioribose-1-phosphate isomerase isoform 1 [Macaca mulatta]
gi|383414587|gb|AFH30507.1| methylthioribose-1-phosphate isomerase isoform 1 [Macaca mulatta]
Length = 369
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 95/133 (71%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
+V +KL +LV++RPTAVNM RAA + + + A+ V+ R+I+ E MLEKD+
Sbjct: 78 FVRDKLSFLVTSRPTAVNMARAARDLADAAAREAEREGATEEAVRERVIRCAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTSRPTAVNMARAARDLADAAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|326428583|gb|EGD74153.1| methylthioribose-1-phosphate isomerase [Salpingoeca sp. ATCC 50818]
Length = 378
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTV 200
V++ + F ++ LD+L ++RPTAVN+ AA+ +++ ++ A + + V
Sbjct: 75 VELHKRTFASAGDAAAFIKTSLDHLRTSRPTAVNLFEAANKLEALSAKLAAQEGATAQQV 134
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+ IE M+ DI+DN+AIG++GA+A++ G K+ +LTHCNTGSLATA+YGTAL
Sbjct: 135 VAGTLAKIEGMMAADIADNRAIGKHGAEAIL-AKTGKDKVRILTHCNTGSLATAQYGTAL 193
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR LH + A+CTETRPYNQGAR
Sbjct: 194 GVIRCLHELGSLDHAFCTETRPYNQGAR 221
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 52/185 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I Y L I++QL LP ++ I++V+D + AI+ M+VRGAPAIAIV L L V+
Sbjct: 17 LEAIRYRDGQLSIINQLKLPLVTEYDAISSVQDGWDAIREMRVRGAPAIAIVAALSLAVE 76
Query: 64 IKDKQFPD-----------------------------NELIQL----------------- 77
+ + F N+L L
Sbjct: 77 LHKRTFASAGDAAAFIKTSLDHLRTSRPTAVNLFEAANKLEALSAKLAAQEGATAQQVVA 136
Query: 78 -----IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
IE M+ DI+DN+AIG++GA+A++ + K+ +LTHCNTGSLATA+YGTALGV
Sbjct: 137 GTLAKIEGMMAADIADNRAIGKHGAEAILAKTGK-DKVRILTHCNTGSLATAQYGTALGV 195
Query: 133 IRSLH 137
IR LH
Sbjct: 196 IRCLH 200
>gi|75164750|sp|Q948X8.1|MTNA_TOBAC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|15216226|dbj|BAB63262.1| CIG2 [Nicotiana tabacum]
Length = 374
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 90/137 (65%), Gaps = 1/137 (0%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTVKTRLIQLIESM 211
+D ++ KLDYLVS+RPTAVN+ AA +K + + A A N+V I+ E M
Sbjct: 81 SDDASDFLSNKLDYLVSSRPTAVNLSDAAVKLKEVIKKAATTAKDANSVFQAYIEAAEVM 140
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
LE D++ NKAIG GA L + K+ +LTHCNTGSLATA YGTALGVIR+L+
Sbjct: 141 LEDDVTSNKAIGSYGASFLKEHLTDSQKITILTHCNTGSLATAGYGTALGVIRALYTDGV 200
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRP+NQG+R
Sbjct: 201 LERAFCTETRPFNQGSR 217
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 92/188 (48%), Gaps = 52/188 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K+L SI Y + SL++LDQ LP + +DI + +D + AIK M VRGAPAIAI L L
Sbjct: 9 KTLLSICYNRGSLQLLDQRKLPLETIYLDIQDTKDGWDAIKEMVVRGAPAIAIAAALSLA 68
Query: 62 VDIKD-----------KQFPDNELIQLIES------------------------------ 80
V++ + F N+L L+ S
Sbjct: 69 VEVSNLSSFDGTSDDASDFLSNKLDYLVSSRPTAVNLSDAAVKLKEVIKKAATTAKDANS 128
Query: 81 -----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
MLE D++ NKAIG GA L + K+ +LTHCNTGSLATA YGTA
Sbjct: 129 VFQAYIEAAEVMLEDDVTSNKAIGSYGASFLKEHLTDSQKITILTHCNTGSLATAGYGTA 188
Query: 130 LGVIRSLH 137
LGVIR+L+
Sbjct: 189 LGVIRALY 196
>gi|357157139|ref|XP_003577698.1| PREDICTED: methylthioribose-1-phosphate isomerase-like
[Brachypodium distachyon]
Length = 368
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTVKTRLIQLIESMLEKDIS 217
+V +KL+YLVS+RPTAVN+ AA +++ + A+ A ++ I+ E+ML D++
Sbjct: 83 FVSKKLEYLVSSRPTAVNLSDAATKLQNLVLRTAETAKDAKSIFQVFIEATETMLVDDVA 142
Query: 218 DNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
DNKAIG +GA+ + G SK ++VLTHCNTGSLATA YGTALGVIR+LH + A+
Sbjct: 143 DNKAIGLHGAE-FLQRQVGRSKNISVLTHCNTGSLATAGYGTALGVIRALHSGGVLEKAF 201
Query: 277 CTETRPYNQGAR 288
CTETRP+NQG+R
Sbjct: 202 CTETRPFNQGSR 213
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 91/186 (48%), Gaps = 51/186 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQSI+Y++ SL++LDQ LP +D+ + D + AI+ M VRGAPAIAI L L V
Sbjct: 7 ALQSILYDRGSLRLLDQRKLPLEEVYIDVKDSTDGWNAIRDMVVRGAPAIAIAAALSLAV 66
Query: 63 DIKDKQF--PDNELIQLIESMLE------------------------------------- 83
++ ++ F E + LE
Sbjct: 67 EVFNQDFIGTSEEAASFVSKKLEYLVSSRPTAVNLSDAATKLQNLVLRTAETAKDAKSIF 126
Query: 84 ------------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
D++DNKAIG +GA+ L R ++VLTHCNTGSLATA YGTALG
Sbjct: 127 QVFIEATETMLVDDVADNKAIGLHGAEFLQRQVGRSKNISVLTHCNTGSLATAGYGTALG 186
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 187 VIRALH 192
>gi|302821439|ref|XP_002992382.1| hypothetical protein SELMODRAFT_135203 [Selaginella moellendorffii]
gi|300139798|gb|EFJ06532.1| hypothetical protein SELMODRAFT_135203 [Selaginella moellendorffii]
Length = 368
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVK--SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
++LDYLVS+RPTAVN+ AA+ +K +S++ + V I+ E+ LE+D+S N
Sbjct: 87 KRLDYLVSSRPTAVNLADAAEKLKKVASVAASTDNASAQDVFQAYIEAAEAFLEEDVSSN 146
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
KAIG G+ L++ KL VLTHCNTGSLATA YGTALGVIR+LH N++ A+CTE
Sbjct: 147 KAIGDYGSAFLLNGADESRKLAVLTHCNTGSLATAGYGTALGVIRALHSQNRLHTAFCTE 206
Query: 280 TRPYN-QGAR 288
TRPYN QG+R
Sbjct: 207 TRPYNQQGSR 216
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E+ LE+D+S NKAIG G+ L++ KL VLTHCNTGSLATA YGTALGVIR
Sbjct: 132 IEAAEAFLEEDVSSNKAIGDYGSAFLLNGADESRKLAVLTHCNTGSLATAGYGTALGVIR 191
Query: 135 SLHGANKI 142
+LH N++
Sbjct: 192 ALHSQNRL 199
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+L++I+Y + SL++LDQ LP +D+N+ ++AIK M VRGA
Sbjct: 6 ALRAIVYNRGSLRLLDQRELPFKIVYLDVNDSGTGWKAIKDMVVRGA 52
>gi|291226417|ref|XP_002733184.1| PREDICTED: GK22419-like [Saccoglossus kowalevskii]
Length = 365
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 103/147 (70%), Gaps = 2/147 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVK 201
V++ +QF L ++V L +L +ARPTAVNM AA+ + + + S V +K
Sbjct: 61 VELIKQQFESKTKLSEFVETSLTHLKTARPTAVNMTEAANRLIKLVEVLCQNSMSVEIIK 120
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
R+I+ E+ML+KD++DNK++G++GA+ +I+ G L+V+THCNTGSLATA YGTA+G
Sbjct: 121 ERIIEECEAMLKKDVADNKSMGQHGAKVIIN-QCGNDNLHVMTHCNTGSLATAGYGTAIG 179
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIR+LH K+ AYCTETRPYNQG+R
Sbjct: 180 VIRALHEIGKLEHAYCTETRPYNQGSR 206
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 108/190 (56%), Gaps = 51/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+SI Y+ SLKIL+Q LLP S +I+ ++DA+ AIK+M VRGAPAIAIVG L L V
Sbjct: 2 SLESIHYKTGSLKILNQRLLPTKSVYEEIHTIQDAWDAIKTMMVRGAPAIAIVGALTLAV 61
Query: 63 DIKDKQFPD-----------------------------NELIQLIE-------------- 79
++ +QF N LI+L+E
Sbjct: 62 ELIKQQFESKTKLSEFVETSLTHLKTARPTAVNMTEAANRLIKLVEVLCQNSMSVEIIKE 121
Query: 80 -------SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+ML+KD++DNK++G++GA+ +I+ L+V+THCNTGSLATA YGTA+GV
Sbjct: 122 RIIEECEAMLKKDVADNKSMGQHGAKVIINQCGN-DNLHVMTHCNTGSLATAGYGTAIGV 180
Query: 133 IRSLHGANKI 142
IR+LH K+
Sbjct: 181 IRALHEIGKL 190
>gi|291416090|ref|XP_002724279.1| PREDICTED: translation initiation factor eIF-2B subunit
alpha/beta/delta-like protein [Oryctolagus cuniculus]
Length = 365
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V E+L YLV+ARPTAVNM RAA + + + A+ + V+ R+I+ E ML++D+
Sbjct: 78 FVREQLRYLVTARPTAVNMARAARDLADAAAREAEQEGATEEAVRERVIRYAEDMLDRDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN+ IG GA+ L++ P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRRIGDLGARHLLERAAPEGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLERA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 102/193 (52%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV- 61
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L
Sbjct: 2 ALEAIRYSRGSLQILDQLLLPEQSRYEAVESVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 62 --------------VDIKDKQF-------PD----------------------------- 71
VD +Q P
Sbjct: 62 ELQAGAGGPGLAALVDFVREQLRYLVTARPTAVNMARAARDLADAAAREAEQEGATEEAV 121
Query: 72 -NELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E ML++D+ DN+ IG GA+ L++ P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRYAEDMLDRDLRDNRRIGDLGARHLLERAAPEGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|302768677|ref|XP_002967758.1| hypothetical protein SELMODRAFT_87975 [Selaginella moellendorffii]
gi|300164496|gb|EFJ31105.1| hypothetical protein SELMODRAFT_87975 [Selaginella moellendorffii]
Length = 368
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVK--SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
++LDYLVS+RPTAVN+ AA+ +K +S++ + V I+ E+ LE+D+S N
Sbjct: 87 KRLDYLVSSRPTAVNLADAAEKLKRVASVAASTDNASAQDVFQAYIEAAEAFLEEDVSSN 146
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
KAIG G+ L++ KL VLTHCNTGSLATA YGTALGVIR+LH N++ A+CTE
Sbjct: 147 KAIGDYGSAFLLNGADESRKLAVLTHCNTGSLATAGYGTALGVIRALHSQNRLHTAFCTE 206
Query: 280 TRPYN-QGAR 288
TRPYN QG+R
Sbjct: 207 TRPYNQQGSR 216
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E+ LE+D+S NKAIG G+ L++ KL VLTHCNTGSLATA YGTALGVIR
Sbjct: 132 IEAAEAFLEEDVSSNKAIGDYGSAFLLNGADESRKLAVLTHCNTGSLATAGYGTALGVIR 191
Query: 135 SLHGANKI 142
+LH N++
Sbjct: 192 ALHSQNRL 199
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
+L++IIY + SL++LDQ LP +D+N+ ++AIK M VRGA
Sbjct: 6 ALRAIIYNRGSLRLLDQRELPFKIVYLDVNDSGTGWKAIKDMVVRGA 52
>gi|189193785|ref|XP_001933231.1| methylthioribose-1-phosphate isomerase [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|313471355|sp|B2VZQ8.1|MTNA_PYRTR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|187978795|gb|EDU45421.1| methylthioribose-1-phosphate isomerase [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 392
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 99/140 (70%), Gaps = 6/140 (4%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV---NTVKTRLIQLIES 210
+ ++ ++ EKLDYLV++RPTAVN+ AA ++ ++E A AS ++V+ + E
Sbjct: 73 EEVKVFITEKLDYLVTSRPTAVNLADAAGKLQR-ITESAAASEGADGDSVREAYVSAAEK 131
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHG 268
ML D+SDN++IG++GA+ ++ K ++++THCNTGSLATA YGTALGVIRSLH
Sbjct: 132 MLVDDVSDNESIGKHGAEWIMKNTEAGKKGPVSMMTHCNTGSLATAGYGTALGVIRSLHS 191
Query: 269 ANKIGAAYCTETRPYNQGAR 288
A + A+C+ETRPYNQG+R
Sbjct: 192 AGSLKHAFCSETRPYNQGSR 211
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 99/194 (51%), Gaps = 56/194 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y + L+ILDQL LPH + I + DA+ AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LQAIKYSRGQLEILDQLKLPHAEEYDHIYSSTDAWHAIKEMRTRGAPAIAIVAALALAVE 62
Query: 64 IKDKQFPD------------------------------NELIQLIES------------- 80
+ + + P +L ++ ES
Sbjct: 63 LSNMKLPSVAEEVKVFITEKLDYLVTSRPTAVNLADAAGKLQRITESAAASEGADGDSVR 122
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGT 128
ML D+SDN++IG++GA+ ++ N K ++++THCNTGSLATA YGT
Sbjct: 123 EAYVSAAEKMLVDDVSDNESIGKHGAEWIMK-NTEAGKKGPVSMMTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLHGANKI 142
ALGVIRSLH A +
Sbjct: 182 ALGVIRSLHSAGSL 195
>gi|313235430|emb|CBY10945.1| unnamed protein product [Oikopleura dioica]
Length = 385
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 34/172 (19%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I YE L ILDQL LP S+ + IN+VED ++AIK M VRGAPAIAIVGCL + V
Sbjct: 2 SLEAIKYENGKLTILDQLKLPLFSEYLKINSVEDGFRAIKEMNVRGAPAIAIVGCLTVAV 61
Query: 63 DIKDKQFPD-NELIQLIESMLEK-------------------------------DISDNK 90
++ K+F + EL + +++ E+ D+ NK
Sbjct: 62 AVQKKKFENMKELAEFVKTSFERLVAARPTAVNMTENKKMRENLLSKLESEMASDVKTNK 121
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
IG +GA +I L + +LTHCNTGSLATA YGTALGVIRSL NK+
Sbjct: 122 LIGDHGAAEIIKLLG--DNVTILTHCNTGSLATAGYGTALGVIRSLQRENKL 171
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 19/146 (13%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V ++ K+F + L ++V + LV+ARPTAVNM + ++
Sbjct: 61 VAVQKKKFENMKELAEFVKTSFERLVAARPTAVNM-----------------TENKKMRE 103
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
L+ +ES + D+ NK IG +GA +I L + +LTHCNTGSLATA YGTALGV
Sbjct: 104 NLLSKLESEMASDVKTNKLIGDHGAAEIIKLLG--DNVTILTHCNTGSLATAGYGTALGV 161
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSL NK+ +CTETRPYNQGAR
Sbjct: 162 IRSLQRENKLKHVFCTETRPYNQGAR 187
>gi|355755523|gb|EHH59270.1| Methylthioribose-1-phosphate isomerase [Macaca fascicularis]
Length = 369
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 94/133 (70%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
+V +KL +LV++RPTAVNM RAA + + + A+ ++ R+I+ E MLEK +
Sbjct: 78 FVRDKLSFLVTSRPTAVNMARAAPHLADAAAREAEREGATEEALRERVIRCAEDMLEKGL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLHSLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTSRPTAVNMARAAPHLADAAAREAEREGATEEAL 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEK + DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKGLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHSLGRL 194
>gi|307110326|gb|EFN58562.1| hypothetical protein CHLNCDRAFT_140697 [Chlorella variabilis]
Length = 836
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 7/147 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTVKTRLIQ 206
QF + YV +++D+LV++RPTAVN+ AA+++K E A + +V ++
Sbjct: 77 QFQGPAAAAAYVAQQMDFLVTSRPTAVNLSIAAEALKRLAGEEAGRAGATAASVTAAVVA 136
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALG 261
++M+ +D++ NKA+GR+GA AL+ G +L VLTHCNTGSLATA YGTALG
Sbjct: 137 ACQAMMAEDVAANKAMGRHGADALLAAAQERGRAGSGRLRVLTHCNTGSLATAAYGTALG 196
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIR+LH ++ AYC ETRPYNQGAR
Sbjct: 197 VIRALHEQGRLEHAYCCETRPYNQGAR 223
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPR-----VSKLNVLTHCNTGSLATAEYGTALGVI 133
++M+ +D++ NKA+GR+GA AL+ +L VLTHCNTGSLATA YGTALGVI
Sbjct: 139 QAMMAEDVAANKAMGRHGADALLAAAQERGRAGSGRLRVLTHCNTGSLATAAYGTALGVI 198
Query: 134 RSLHGANKI 142
R+LH ++
Sbjct: 199 RALHEQGRL 207
>gi|395756899|ref|XP_003780201.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase [Pongo abelii]
Length = 323
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 99/146 (67%), Gaps = 6/146 (4%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP-AIAIVGCLGLV 61
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+V GAP + A+VGCL L
Sbjct: 2 TLEAIRYTRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVCGAPRSYALVGCLSLA 61
Query: 62 VDIKDKQF----PDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHC 116
V+++ +I E MLEKD+ DN++IG GA+ L+ + P K+ VLTHC
Sbjct: 62 VELQAGAGGTGNSPRSVICCTEDMLEKDLRDNRSIGDLGARHLLQRVAPSGGKVTVLTHC 121
Query: 117 NTGSLATAEYGTALGVIRSLHGANKI 142
NTG+LATA YGTALGVIRSLH ++
Sbjct: 122 NTGALATAGYGTALGVIRSLHSLGRL 147
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
+I E MLEKD+ DN++IG GA+ L+ + P K+ VLTHCNTG+LATA YGTALGV
Sbjct: 78 VICCTEDMLEKDLRDNRSIGDLGARHLLQRVAPSGGKVTVLTHCNTGALATAGYGTALGV 137
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSLH ++ A+CTETRPYNQGAR
Sbjct: 138 IRSLHSLGRLEHAFCTETRPYNQGAR 163
>gi|431898034|gb|ELK06741.1| Methylthioribose-1-phosphate isomerase [Pteropus alecto]
Length = 361
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLI 208
P L +V + L +LV+ARPTAVNM RAA + + + A+ + TV+ R+I
Sbjct: 71 PGLAELVAFVRDALTFLVTARPTAVNMARAARDLAEAAAREAEREGATEETVRERVICYA 130
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKD+ DN++IG GA L++ P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 131 EDMLEKDLRDNRSIGDLGAHHLLERAAPKGGKVTVLTHCNTGALATAGYGTALGVIRSLH 190
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQGAR
Sbjct: 191 NLGRLERAFCTETRPYNQGAR 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 102/195 (52%), Gaps = 53/195 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M L++I Y + SL+ILDQLLLP S + +V A++AI++M+VRGAPAIA+VGCL L
Sbjct: 1 MPPLEAIRYSRGSLQILDQLLLPQQSHYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSL 60
Query: 61 ----------------VVDIKD------------------------------------KQ 68
V ++D ++
Sbjct: 61 AVELQAGAGGPGLAELVAFVRDALTFLVTARPTAVNMARAARDLAEAAAREAEREGATEE 120
Query: 69 FPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYG 127
+I E MLEKD+ DN++IG GA L++ P+ K+ VLTHCNTG+LATA YG
Sbjct: 121 TVRERVICYAEDMLEKDLRDNRSIGDLGAHHLLERAAPKGGKVTVLTHCNTGALATAGYG 180
Query: 128 TALGVIRSLHGANKI 142
TALGVIRSLH ++
Sbjct: 181 TALGVIRSLHNLGRL 195
>gi|67528168|ref|XP_661894.1| hypothetical protein AN4290.2 [Aspergillus nidulans FGSC A4]
gi|74596023|sp|Q5B590.1|MTNA_EMENI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|40740852|gb|EAA60042.1| hypothetical protein AN4290.2 [Aspergillus nidulans FGSC A4]
gi|259482906|tpe|CBF77829.1| TPA: translation initiation factor, putative (AFU_orthologue;
AFUA_4G05830) [Aspergillus nidulans FGSC A4]
Length = 379
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 106/167 (63%), Gaps = 8/167 (4%)
Query: 129 ALGVIRSLHGANKI--VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKS 186
A+ ++ +L A+++ + I++K + + ++ E+L +LVS+RPTAVN+ AA ++
Sbjct: 50 AIAIVAALSLASELHELSIRNKISTTAEDVTAFIRERLGHLVSSRPTAVNLSDAARKLEV 109
Query: 187 SLSEWAK--ASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVS---KLN 241
+SE ++ S + IQ E ML KD+ DN IG NGA+ I +N + K
Sbjct: 110 IVSERSQTPGSTAQDIVNVFIQAAEGMLAKDVEDNTRIGENGAK-WISMNALPTDHDKAV 168
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCNTGSLATA YGTALGVIRSL N + AYCTETRPYNQG+R
Sbjct: 169 VLTHCNTGSLATAGYGTALGVIRSLMANNTLQHAYCTETRPYNQGSR 215
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 93/197 (47%), Gaps = 58/197 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
L++I Y+ L I+DQL LP T + ++I E+ +QAIK+MQVRGAPAIAIV L L
Sbjct: 3 LEAIRYKDGKLSIIDQLQLPFTERYIEIRTSEEGWQAIKNMQVRGAPAIAIVAALSLASE 62
Query: 62 ---VDIKDK---------QFPDNELIQLIESM------------LEKDISDNKAIGRNGA 97
+ I++K F L L+ S LE +S+ + A
Sbjct: 63 LHELSIRNKISTTAEDVTAFIRERLGHLVSSRPTAVNLSDAARKLEVIVSERSQTPGSTA 122
Query: 98 QALIDL---------------NPRVS-----------------KLNVLTHCNTGSLATAE 125
Q ++++ N R+ K VLTHCNTGSLATA
Sbjct: 123 QDIVNVFIQAAEGMLAKDVEDNTRIGENGAKWISMNALPTDHDKAVVLTHCNTGSLATAG 182
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGVIRSL N +
Sbjct: 183 YGTALGVIRSLMANNTL 199
>gi|356530441|ref|XP_003533789.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase-like [Glycine max]
Length = 370
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLEKDISDNK 220
+KL+YLV++RPTAVN+ AA +K +S A S +V I E MLE D++ N+
Sbjct: 91 KKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVFQVYIDAAEVMLEDDVASNR 150
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
AIG GA ++I KL+VLTHCNTGSLATA YGTALGVIR+LH A + AYCTET
Sbjct: 151 AIGSYGA-SIIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSAGVLKRAYCTET 209
Query: 281 RPYNQGAR 288
RP+NQG+R
Sbjct: 210 RPFNQGSR 217
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 52/188 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I Y++ SL++LDQ LP + ++I + D + AI+ M VRGAPAIAI L L V
Sbjct: 12 TLQAICYKRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIREMVVRGAPAIAIAAALSLAV 71
Query: 63 DIKDKQF--PDNELIQLIESMLE------------------------------------- 83
++ + F + + L++ LE
Sbjct: 72 EVFNLDFNGSATDAVSLLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVF 131
Query: 84 ------------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
D++ N+AIG GA ++I KL+VLTHCNTGSLATA YGTALG
Sbjct: 132 QVYIDAAEVMLEDDVASNRAIGSYGA-SIIQQQTEKQKLSVLTHCNTGSLATAGYGTALG 190
Query: 132 VIRSLHGA 139
VIR+LH A
Sbjct: 191 VIRALHSA 198
>gi|313235429|emb|CBY10944.1| unnamed protein product [Oikopleura dioica]
Length = 424
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 34/172 (19%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I YE L ILDQL LP S+ + IN+VED ++AIK M VRGAPAIAIVGCL + V
Sbjct: 2 SLEAIKYENGKLTILDQLKLPLFSEYLKINSVEDGFRAIKEMNVRGAPAIAIVGCLTVAV 61
Query: 63 DIKDKQFPD-NELIQLIESMLEK-------------------------------DISDNK 90
++ K+F + EL + +++ E+ D+ NK
Sbjct: 62 AVQKKKFENMKELAEFVKTSFERLVAARPTAVNMTENKKMRENLLSKLESEMASDVKTNK 121
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
IG +GA +I L + +LTHCNTGSLATA YGTALGVIRSL NK+
Sbjct: 122 LIGDHGAAEIIKLLG--DNVTILTHCNTGSLATAGYGTALGVIRSLQRENKL 171
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 19/146 (13%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V ++ K+F + L ++V + LV+ARPTAVNM + ++
Sbjct: 61 VAVQKKKFENMKELAEFVKTSFERLVAARPTAVNM-----------------TENKKMRE 103
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
L+ +ES + D+ NK IG +GA +I L + +LTHCNTGSLATA YGTALGV
Sbjct: 104 NLLSKLESEMASDVKTNKLIGDHGAAEIIKLLG--DNVTILTHCNTGSLATAGYGTALGV 161
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSL NK+ +CTETRPYNQGAR
Sbjct: 162 IRSLQRENKLKHVFCTETRPYNQGAR 187
>gi|398394465|ref|XP_003850691.1| hypothetical protein MYCGRDRAFT_73955 [Zymoseptoria tritici IPO323]
gi|339470570|gb|EGP85667.1| hypothetical protein MYCGRDRAFT_73955 [Zymoseptoria tritici IPO323]
Length = 389
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 92/137 (67%), Gaps = 3/137 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ + ++ EKLDYLV++RPTAVN+ AA +K + + A + +VK M
Sbjct: 73 EEVAAFILEKLDYLVTSRPTAVNLADAAGKLKKIVDTASNAEGADGASVKKAYCDAAAEM 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L D++DN+ IG++GA+ I + G K++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LVADVADNRGIGKHGAE-WITKSAGGGKVSVVTHCNTGSLATAGYGTALGVIRSLHANGS 191
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 192 LQHAFCTETRPYNQGSR 208
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
ML D++DN+ IG++GA+ I + K++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 132 MLVADVADNRGIGKHGAE-WITKSAGGGKVSVVTHCNTGSLATAGYGTALGVIRSLH 187
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
L++I Y+ SL+IL+QL LPH + I + ED + AIK M+ RGAP
Sbjct: 3 LEAIRYQPGSLQILNQLKLPHQEEYDHIRSAEDGWHAIKDMRTRGAP 49
>gi|313235405|emb|CBY10920.1| unnamed protein product [Oikopleura dioica]
Length = 228
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 99/172 (57%), Gaps = 34/172 (19%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL++I YE L ILDQL LP S+ + IN+VED ++AIK M VRGAPAIAIVGCL + V
Sbjct: 2 SLEAIKYENGKLTILDQLKLPLFSEYLKINSVEDGFRAIKEMNVRGAPAIAIVGCLTVAV 61
Query: 63 DIKDKQFPD-NELIQLIESMLEK-------------------------------DISDNK 90
++ K+F + EL + +++ E+ D+ NK
Sbjct: 62 AVQKKKFENMKELAEFVKTSFERLVAARPTAVNMTENKKMRENLLSKLESEMASDVKTNK 121
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
IG +GA +I L + +LTHCNTGSLATA YGTALGVIRSL NK+
Sbjct: 122 LIGDHGAAEIIKL--LGDNVTILTHCNTGSLATAGYGTALGVIRSLQRENKL 171
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 87/146 (59%), Gaps = 19/146 (13%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V ++ K+F + L ++V + LV+ARPTAVNM +E K ++
Sbjct: 61 VAVQKKKFENMKELAEFVKTSFERLVAARPTAVNM-----------TENKK------MRE 103
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
L+ +ES + D+ NK IG +GA +I L + +LTHCNTGSLATA YGTALGV
Sbjct: 104 NLLSKLESEMASDVKTNKLIGDHGAAEIIKLLG--DNVTILTHCNTGSLATAGYGTALGV 161
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSL NK+ +CTETRPYNQGAR
Sbjct: 162 IRSLQRENKLKHVFCTETRPYNQGAR 187
>gi|168003678|ref|XP_001754539.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694160|gb|EDQ80509.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLEKDIS 217
++ +LDYLVS+RPTAVN+ AA ++ + A K V ++ E ML D++
Sbjct: 77 FLKNRLDYLVSSRPTAVNLAEAATNLLNICQAVADKGDDAEAVYQAYLEAAEKMLAADVA 136
Query: 218 DNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
NKAIG GA+AL+ P + VLTHCNTGSLAT++YGTALGVIR+LH K+ A
Sbjct: 137 SNKAIGAYGAEALLQAKPASGNGMRVLTHCNTGSLATSQYGTALGVIRALHAQGKLETAI 196
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 197 CTETRPYNQGSR 208
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 91/192 (47%), Gaps = 53/192 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I Y + SL++LDQ LP+ S DI + + AI M VRGAPAIAI L L V+
Sbjct: 1 LLAIRYRRGSLQLLDQRKLPYESIYSDIKDAVAGWAAISDMVVRGAPAIAIAAALALAVE 60
Query: 64 IKDKQ-----------FPDNELIQLIES-------------------------------- 80
++ + F N L L+ S
Sbjct: 61 VESLKPFSGAGLEAVAFLKNRLDYLVSSRPTAVNLAEAATNLLNICQAVADKGDDAEAVY 120
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYGTAL 130
ML D++ NKAIG GA+AL+ P + VLTHCNTGSLAT++YGTAL
Sbjct: 121 QAYLEAAEKMLAADVASNKAIGAYGAEALLQAKPASGNGMRVLTHCNTGSLATSQYGTAL 180
Query: 131 GVIRSLHGANKI 142
GVIR+LH K+
Sbjct: 181 GVIRALHAQGKL 192
>gi|242006354|ref|XP_002424016.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212507308|gb|EEB11278.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 357
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 103/148 (69%), Gaps = 2/148 (1%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TV 200
V+++ ++ +L + V KL+YLVSARPTAVNMK AAD + + ++ K V+ +
Sbjct: 61 VELQKEEHDSKKTLRQDVEGKLNYLVSARPTAVNMKIAADELIALANDLEKNDLVSHAEM 120
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
K + I IE+ML+KD++DN+ IG GA A++ G + +LTHCNTGSLATA +GTAL
Sbjct: 121 KQKFITAIEAMLKKDLTDNETIGALGAAAILANIQGDGPVRILTHCNTGSLATAGFGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+IR+LH + K+ YCTETRPYNQGAR
Sbjct: 181 GIIRTLHSSKKLDLVYCTETRPYNQGAR 208
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 106/191 (55%), Gaps = 51/191 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+I Y+ SL+ILDQLLLP SK + +N VED ++ I +MQVRGAPAIAIVGCL L V
Sbjct: 2 SLQAIKYKNGSLEILDQLLLPGQSKYISVNGVEDGWKVINTMQVRGAPAIAIVGCLSLCV 61
Query: 63 DIKDKQ-----------------------------FPDNELIQL---------------- 77
+++ ++ +ELI L
Sbjct: 62 ELQKEEHDSKKTLRQDVEGKLNYLVSARPTAVNMKIAADELIALANDLEKNDLVSHAEMK 121
Query: 78 ------IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+ML+KD++DN+ IG GA A++ + +LTHCNTGSLATA +GTALG
Sbjct: 122 QKFITAIEAMLKKDLTDNETIGALGAAAILANIQGDGPVRILTHCNTGSLATAGFGTALG 181
Query: 132 VIRSLHGANKI 142
+IR+LH + K+
Sbjct: 182 IIRTLHSSKKL 192
>gi|425770037|gb|EKV08512.1| Methylthioribose-1-phosphate isomerase [Penicillium digitatum Pd1]
gi|425771728|gb|EKV10165.1| Methylthioribose-1-phosphate isomerase [Penicillium digitatum
PHI26]
Length = 382
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 89/134 (66%), Gaps = 3/134 (2%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKD 215
+Y+ EKL YLV++RPTAVN+ AA +++ + KAS V IQ E M+ KD
Sbjct: 80 QYITEKLAYLVTSRPTAVNLADAARKLEAVVVTRTKASGSTGQEVAAAFIQAAEDMMGKD 139
Query: 216 ISDNKAIGRNGAQAL-IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
+ DNK IG NGA+ + G S++ VLTHCNTGSLAT+ YGTALGV+RSL +
Sbjct: 140 LEDNKRIGHNGAEWIATHAARGNSEVAVLTHCNTGSLATSGYGTALGVVRSLASKKILRH 199
Query: 275 AYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 200 AYCTETRPYNQGSR 213
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 93/191 (48%), Gaps = 59/191 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I + K +L+ILDQL LP + + I ED + AIK M+VRGAPAIAIV L L +
Sbjct: 2 LQAIKFSKGNLEILDQLQLPFVEEYIPIRTTEDGWHAIKDMKVRGAPAIAIVAMLALASE 61
Query: 64 I-------KDKQFPDNELIQLI-------------------------------------- 78
+ K Q P+ E+ Q I
Sbjct: 62 LTSAVDSGKLSQSPE-EVCQYITEKLAYLVTSRPTAVNLADAARKLEAVVVTRTKASGST 120
Query: 79 ------------ESMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAE 125
E M+ KD+ DNK IG NGA+ + R S++ VLTHCNTGSLAT+
Sbjct: 121 GQEVAAAFIQAAEDMMGKDLEDNKRIGHNGAEWIATHAARGNSEVAVLTHCNTGSLATSG 180
Query: 126 YGTALGVIRSL 136
YGTALGV+RSL
Sbjct: 181 YGTALGVVRSL 191
>gi|452837696|gb|EME39638.1| hypothetical protein DOTSEDRAFT_75327 [Dothistroma septosporum
NZE10]
Length = 391
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN----TVKTRLIQLIE 209
+ + ++ EKL+YLV++RPTAVN+ AA +K ++E A A + V
Sbjct: 73 EEVAAFIIEKLNYLVTSRPTAVNLADAAGKLKK-ITESAAAQSSDDDGAAVSKAYCDAAA 131
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+ML D+SDN+ IG +GA ++ P ++VLTHCNTGSLATA YGTALGVIRSLH +
Sbjct: 132 AMLIADVSDNEGIGHHGADWILRNTPHKGPISVLTHCNTGSLATAGYGTALGVIRSLHFS 191
Query: 270 NKIGAAYCTETRPYNQGAR 288
K+ A+CTETRPYNQG+R
Sbjct: 192 GKLHHAFCTETRPYNQGSR 210
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 96/192 (50%), Gaps = 53/192 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L++I YE SL IL+QL LPH + +I ED + AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LEAIRYEPGSLYILNQLKLPHQEEYDEIKTAEDGWHAIKDMRTRGAPAIAIVAALSLAVE 62
Query: 64 IKDKQFPD------------------------------NELIQLIES------------- 80
+ + + D +L ++ ES
Sbjct: 63 LTNTKVSDKAEEVAAFIIEKLNYLVTSRPTAVNLADAAGKLKKITESAAAQSSDDDGAAV 122
Query: 81 ----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
ML D+SDN+ IG +GA ++ P ++VLTHCNTGSLATA YGTAL
Sbjct: 123 SKAYCDAAAAMLIADVSDNEGIGHHGADWILRNTPHKGPISVLTHCNTGSLATAGYGTAL 182
Query: 131 GVIRSLHGANKI 142
GVIRSLH + K+
Sbjct: 183 GVIRSLHFSGKL 194
>gi|145328274|ref|NP_001077883.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
gi|330250884|gb|AEC05978.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
Length = 328
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++ KLDYLVS+RPTAVN+ AA +K +++ A A+ ++ I+ E MLE D+
Sbjct: 39 FLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVV 98
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG G L KL+VLTHCNTGSLATA YGTALGVIR+LH + AYC
Sbjct: 99 SNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALHTQGILERAYC 158
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 159 TETRPFNQGSR 169
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 43/63 (68%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E MLE D+ NKAIG G L KL+VLTHCNTGSLATA YGTALGVIR
Sbjct: 86 IEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIR 145
Query: 135 SLH 137
+LH
Sbjct: 146 ALH 148
>gi|42570709|ref|NP_973428.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
gi|79322184|ref|NP_001031339.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
gi|20466258|gb|AAM20446.1| putative translation initiation factor eIF-2B alpha subunit
[Arabidopsis thaliana]
gi|22136322|gb|AAM91239.1| putative translation initiation factor eIF-2B alpha subunit
[Arabidopsis thaliana]
gi|330250882|gb|AEC05976.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
gi|330250883|gb|AEC05977.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
Length = 326
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++ KLDYLVS+RPTAVN+ AA +K +++ A A+ ++ I+ E MLE D+
Sbjct: 37 FLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVV 96
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG G L KL+VLTHCNTGSLATA YGTALGVIR+LH + AYC
Sbjct: 97 SNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALHTQGILERAYC 156
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 157 TETRPFNQGSR 167
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 43/63 (68%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E MLE D+ NKAIG G L KL+VLTHCNTGSLATA YGTALGVIR
Sbjct: 84 IEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIR 143
Query: 135 SLH 137
+LH
Sbjct: 144 ALH 146
>gi|18396170|ref|NP_027726.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
gi|75216779|sp|Q9ZUG4.2|MTNA_ARATH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|20197503|gb|AAC95160.2| putative translation initiation factor eIF-2B alpha subunit
[Arabidopsis thaliana]
gi|330250881|gb|AEC05975.1| NagB/RpiA/CoA transferase-like protein [Arabidopsis thaliana]
Length = 374
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 87/131 (66%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++ KLDYLVS+RPTAVN+ AA +K +++ A A+ ++ I+ E MLE D+
Sbjct: 85 FLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVV 144
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG G L KL+VLTHCNTGSLATA YGTALGVIR+LH + AYC
Sbjct: 145 SNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTALGVIRALHTQGILERAYC 204
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 205 TETRPFNQGSR 215
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 90/187 (48%), Gaps = 52/187 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y+ SL++LDQ LP + ++I + D + AI+ M VRGAPAIAI L L V
Sbjct: 8 TLKAICYKPGSLQLLDQRKLPLETIYLEIRDASDGWSAIQEMVVRGAPAIAIAAALSLAV 67
Query: 63 DIKDKQ-----------FPDNELIQLI--------------------------------- 78
++ + F +N+L L+
Sbjct: 68 EVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSI 127
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
E MLE D+ NKAIG G L KL+VLTHCNTGSLATA YGTAL
Sbjct: 128 FKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNTGSLATAGYGTAL 187
Query: 131 GVIRSLH 137
GVIR+LH
Sbjct: 188 GVIRALH 194
>gi|326477394|gb|EGE01404.1| S-methyl-5-thioribose-1-phosphate isomerase [Trichophyton equinum
CBS 127.97]
Length = 385
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
DK + + +E ++ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 70 DKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQ---KRKQIGDPKGKDLA 126
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 127 EAYVEAAEKMLIDDAMDNHRLGDFGATWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGT 186
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH ++K+ AYCTETRPYNQGAR
Sbjct: 187 ALGVIRSLHASDKLEHAYCTETRPYNQGAR 216
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 94/199 (47%), Gaps = 59/199 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +
Sbjct: 2 SLQSIRYKRGMLQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSI 61
Query: 63 DI-------------------------------------------------KDKQFPD-- 71
++ K KQ D
Sbjct: 62 ELTELMDHDKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQKRKQIGDPK 121
Query: 72 -----NELIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLAT
Sbjct: 122 GKDLAEAYVEAAEKMLIDDAMDNHRLGDFGATWIMNNTPVGKDGKKVGVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSLH ++K+
Sbjct: 182 AGYGTALGVIRSLHASDKL 200
>gi|440912467|gb|ELR62033.1| Methylthioribose-1-phosphate isomerase, partial [Bos grunniens
mutus]
Length = 365
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V + L +LV+ARPTAVNM RAA + ++ A+ + V+ R+I E ML+KD+
Sbjct: 85 FVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAVRERVICWAEDMLDKDL 144
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA L+ P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 145 RDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLKHA 204
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 205 FCTETRPYNQGAR 217
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 103/193 (53%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 9 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 68
Query: 63 DIKDKQ----------FPDNELIQLI-------------------------------ESM 81
+++ F + L L+ E++
Sbjct: 69 ELQAGAGGPGLAALVAFVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAV 128
Query: 82 LEK-----------DISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
E+ D+ DN++IG GA L+ P+ K+ VLTHCNTG+LATA YGTA
Sbjct: 129 RERVICWAEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTA 188
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 189 LGVIRSLHNLGRL 201
>gi|326472910|gb|EGD96919.1| translation initiation factor [Trichophyton tonsurans CBS 112818]
Length = 385
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
DK + + +E ++ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 70 DKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQ---KRKQIGDPKGKDLA 126
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 127 EAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGT 186
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH ++K+ AYCTETRPYNQGAR
Sbjct: 187 ALGVIRSLHASDKLEHAYCTETRPYNQGAR 216
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 94/199 (47%), Gaps = 59/199 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +
Sbjct: 2 SLQSIRYKRGMLQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSI 61
Query: 63 DI-------------------------------------------------KDKQFPD-- 71
++ K KQ D
Sbjct: 62 ELTELMDHDKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQKRKQIGDPK 121
Query: 72 -----NELIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLAT
Sbjct: 122 GKDLAEAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSLH ++K+
Sbjct: 182 AGYGTALGVIRSLHASDKL 200
>gi|114052032|ref|NP_001039852.1| methylthioribose-1-phosphate isomerase [Bos taurus]
gi|122136509|sp|Q2NL31.1|MTNA_BOVIN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|84708710|gb|AAI11155.1| Methylthioribose-1-phosphate isomerase homolog (S. cerevisiae) [Bos
taurus]
gi|296485974|tpg|DAA28089.1| TPA: methylthioribose-1-phosphate isomerase [Bos taurus]
Length = 358
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 91/133 (68%), Gaps = 3/133 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V + L +LV+ARPTAVNM RAA + ++ A+ + V+ R+I E ML+KD+
Sbjct: 78 FVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAVRERVICWAEDMLDKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
DN++IG GA L+ P K+ VLTHCNTG+LATA YGTALGVIRSLH ++ A
Sbjct: 138 RDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLEHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQGAR
Sbjct: 198 FCTETRPYNQGAR 210
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 103/193 (53%), Gaps = 53/193 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIKDKQ----------FPDNELIQLI-------------------------------ESM 81
+++ F + L L+ E++
Sbjct: 62 ELQAGAGGPGLAALVAFVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAV 121
Query: 82 LEK-----------DISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
E+ D+ DN++IG GA L+ P+ K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICWAEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRSLHGANKI 142
LGVIRSLH ++
Sbjct: 182 LGVIRSLHNLGRL 194
>gi|351711541|gb|EHB14460.1| Methylthioribose-1-phosphate isomerase, partial [Heterocephalus
glaber]
Length = 351
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 101/181 (55%), Gaps = 46/181 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I YE SL++LDQLLLP S+ + +V+ A++ + ++ RGAPAIA+VGCL L V
Sbjct: 2 ALEAICYEPGSLRVLDQLLLPQQSRYEAVGSVQQAWEGNRGLKGRGAPAIALVGCLSLAV 61
Query: 63 DIK---------------------------------------------DKQFPDNELIQL 77
+++ ++ P ++I+
Sbjct: 62 ELRTGAGGPGPAELAAFVRDRLNLLVTARPTAIHDGSRSIQASATRGFQEEGPTEQVIRY 121
Query: 78 IESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E MLEKD+ DN++IG GA L++ P+ K+ VLTHCNTG+LATA YGTALGVIRSL
Sbjct: 122 AEDMLEKDLRDNRSIGDLGAHHLLEQAAPKGGKVTVLTHCNTGALATAGYGTALGVIRSL 181
Query: 137 H 137
H
Sbjct: 182 H 182
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 8/140 (5%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIE 209
P L +V ++L+ LV+ARPTA++ + S+++S + + + P V I+ E
Sbjct: 70 PGPAELAAFVRDRLNLLVTARPTAIH--DGSRSIQASATRGFQEEGPTEQV----IRYAE 123
Query: 210 SMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
MLEKD+ DN++IG GA L++ P K+ VLTHCNTG+LATA YGTALGVIRSLH
Sbjct: 124 DMLEKDLRDNRSIGDLGAHHLLEQAAPKGGKVTVLTHCNTGALATAGYGTALGVIRSLHQ 183
Query: 269 ANKIGAAYCTETRPYNQGAR 288
++ +CTETRPYNQGAR
Sbjct: 184 LGRLEHTFCTETRPYNQGAR 203
>gi|330914039|ref|XP_003296469.1| hypothetical protein PTT_06581 [Pyrenophora teres f. teres 0-1]
gi|311331353|gb|EFQ95433.1| hypothetical protein PTT_06581 [Pyrenophora teres f. teres 0-1]
Length = 392
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 91/134 (67%), Gaps = 4/134 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESMLEKDI 216
++ EKLDYLV++RPTAVN+ AA ++ A N +V+ + E ML D+
Sbjct: 78 FIAEKLDYLVTSRPTAVNLADAAGKLRRITESAAALEGANGDSVREAYVAAAEKMLVDDV 137
Query: 217 SDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
SDN++IG++GA+ ++ K ++++THCNTGSLATA YGTALGVIRSLH + +
Sbjct: 138 SDNESIGKHGAEWIMKNTEAGKKGPVSMMTHCNTGSLATAGYGTALGVIRSLHSSASLKH 197
Query: 275 AYCTETRPYNQGAR 288
A+C+ETRPYNQG+R
Sbjct: 198 AFCSETRPYNQGSR 211
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 97/189 (51%), Gaps = 56/189 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y + L+ILDQL LPH + I + DA+ AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LQAIKYSRGQLEILDQLKLPHAEEYDHIYSSTDAWHAIKEMRTRGAPAIAIVAALALAVE 62
Query: 64 IKDKQFPD------------------------------NELIQLIES------------- 80
+ + + P +L ++ ES
Sbjct: 63 LSNMKLPSVAEEVNVFIAEKLDYLVTSRPTAVNLADAAGKLRRITESAAALEGANGDSVR 122
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGT 128
ML D+SDN++IG++GA+ ++ N K ++++THCNTGSLATA YGT
Sbjct: 123 EAYVAAAEKMLVDDVSDNESIGKHGAEWIMK-NTEAGKKGPVSMMTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLH 137
ALGVIRSLH
Sbjct: 182 ALGVIRSLH 190
>gi|302501450|ref|XP_003012717.1| hypothetical protein ARB_00968 [Arthroderma benhamiae CBS 112371]
gi|291176277|gb|EFE32077.1| hypothetical protein ARB_00968 [Arthroderma benhamiae CBS 112371]
Length = 430
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
DK + + +E ++ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 59 DKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQ---KRKQIGDPKGKDLA 115
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 116 EAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGT 175
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH ++K+ AYCTETRPYNQGAR
Sbjct: 176 ALGVIRSLHASDKLEHAYCTETRPYNQGAR 205
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 59/188 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI--------- 64
L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +++
Sbjct: 2 LQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSIELTELMDHDKL 61
Query: 65 ----------------------------------------KDKQFPD-------NELIQL 77
K KQ D ++
Sbjct: 62 SAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQKRKQIGDPKGKDLAEAYVEA 121
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGTALGVIR
Sbjct: 122 AEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGTALGVIR 181
Query: 135 SLHGANKI 142
SLH ++K+
Sbjct: 182 SLHASDKL 189
>gi|302666927|ref|XP_003025058.1| hypothetical protein TRV_00716 [Trichophyton verrucosum HKI 0517]
gi|291189140|gb|EFE44447.1| hypothetical protein TRV_00716 [Trichophyton verrucosum HKI 0517]
Length = 518
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 95/150 (63%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
DK + + +E ++ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 59 DKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQ---KRKQIGDPKGKDLA 115
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 116 EAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGT 175
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH ++K+ AYCTETRPYNQGAR
Sbjct: 176 ALGVIRSLHASDKLEHAYCTETRPYNQGAR 205
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 87/188 (46%), Gaps = 59/188 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI--------- 64
L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +++
Sbjct: 2 LQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSIELTELMDHDKL 61
Query: 65 ----------------------------------------KDKQFPDNE-------LIQL 77
K KQ D + ++
Sbjct: 62 SAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQKRKQIGDPKGKDLAEAYVEA 121
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGTALGVIR
Sbjct: 122 AEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGTALGVIR 181
Query: 135 SLHGANKI 142
SLH ++K+
Sbjct: 182 SLHASDKL 189
>gi|453081837|gb|EMF09885.1| methylthioribose-1-phosphate isomerase [Mycosphaerella populorum
SO2202]
Length = 389
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 3/137 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ + ++ EKL+YLV++RPTAVN+ AA +K ++ A++ + TV M
Sbjct: 73 EEVAAFIVEKLEYLVTSRPTAVNLADAAGKLKKIVTSAARSDGASGATVSQAYCDAAAQM 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L D++DN+ IG+ GA+ I G K++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LVADVADNEGIGKYGAE-WISKAAGGGKVSVVTHCNTGSLATAGYGTALGVIRSLHANGS 191
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 192 LKHAFCTETRPYNQGSR 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
ML D++DN+ IG+ GA+ I K++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 132 MLVADVADNEGIGKYGAE-WISKAAGGGKVSVVTHCNTGSLATAGYGTALGVIRSLH 187
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
LQ+I Y+ SL+IL+QL LPH + +I + ED + AIK M+ RGAP
Sbjct: 3 LQAIRYQPGSLQILNQLKLPHQEEYDEIKSAEDGWHAIKDMRTRGAP 49
>gi|357450083|ref|XP_003595318.1| Methylthioribose-1-phosphate isomerase [Medicago truncatula]
gi|355484366|gb|AES65569.1| Methylthioribose-1-phosphate isomerase [Medicago truncatula]
Length = 382
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLEKDIS 217
++ +KLDYLVS+RPTAVN+ AA +K +S+ A S V ++ E MLE D++
Sbjct: 88 FLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEAKGVFQAYLEAAEIMLEDDVA 147
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
N+AIG GA + + + KL+VLTHCNTGSLATA YGTALGVIR+L+ + AYC
Sbjct: 148 SNRAIGTYGASFIQNQTEKL-KLSVLTHCNTGSLATAGYGTALGVIRALYSGGVLERAYC 206
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 207 TETRPFNQGSR 217
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 90/186 (48%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA---------- 53
LQ+I Y + SL++LDQ LP S ++I + D + AI+ M VRGAPAIA
Sbjct: 12 LQAIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALSLAVE 71
Query: 54 ------------------------IVGCLGLVVDIKDKQFPDNELIQ-----------LI 78
+V V++ D E+I +
Sbjct: 72 VSNLDDFNGSTDDAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEAKGVF 131
Query: 79 ESMLEK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++ LE D++ N+AIG GA + + ++ KL+VLTHCNTGSLATA YGTALG
Sbjct: 132 QAYLEAAEIMLEDDVASNRAIGTYGASFIQNQTEKL-KLSVLTHCNTGSLATAGYGTALG 190
Query: 132 VIRSLH 137
VIR+L+
Sbjct: 191 VIRALY 196
>gi|296425551|ref|XP_002842304.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638567|emb|CAZ86495.1| unnamed protein product [Tuber melanosporum]
Length = 363
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 91/135 (67%), Gaps = 7/135 (5%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
YV +LDYLV +RPTAVN+ AA +K+ +S A+A V R ++ E ML D+ D
Sbjct: 84 YVHRRLDYLVQSRPTAVNLADAAGKLKAVVS--AEAGTAEAVVGRYVEAAEKMLVDDVMD 141
Query: 219 NKAIGRNGAQALID---LNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
N+ IGR GA+ +++ + G K + VLTHCNTGSLATA YGTALG+IRSL+ + +
Sbjct: 142 NENIGRFGAEWILENAKVGEGEEKGMVAVLTHCNTGSLATAGYGTALGIIRSLNSRSNLT 201
Query: 274 AAYCTETRPYNQGAR 288
YCTETRPYNQG+R
Sbjct: 202 HIYCTETRPYNQGSR 216
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%), Gaps = 7/77 (9%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK------LNVLTHCNTGSLATAEYGT 128
++ E ML D+ DN+ IGR GA+ +++ N +V + + VLTHCNTGSLATA YGT
Sbjct: 128 VEAAEKMLVDDVMDNENIGRFGAEWILE-NAKVGEGEEKGMVAVLTHCNTGSLATAGYGT 186
Query: 129 ALGVIRSLHGANKIVDI 145
ALG+IRSL+ + + I
Sbjct: 187 ALGIIRSLNSRSNLTHI 203
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 3 SLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPA 51
SLQ+I+Y +L+ILDQL LPH S V I EDAY AIK M VRGAPA
Sbjct: 2 SLQAILYTPTPPALQILDQLKLPHESVYVPICTCEDAYDAIKRMVVRGAPA 52
>gi|328770852|gb|EGF80893.1| hypothetical protein BATDEDRAFT_19408 [Batrachochytrium
dendrobatidis JAM81]
Length = 399
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 94/139 (67%), Gaps = 9/139 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAAD----SVKSSLSEWAKA---SPVNTVKTRLIQLIESM 211
++ ++L L ++RPTAVN+ AAD +V+ + ++ AK +P+ + + E+M
Sbjct: 88 FISDRLTLLKTSRPTAVNLFEAADRLLRTVQDAATKAAKDLVDNPIAVIVKAYMDTAEAM 147
Query: 212 LEKDISDNKAIGRNGAQALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
L++DI DN IGR GAQ + D + SK+ VLTHCNTGSLATA +GTALG++R LH
Sbjct: 148 LQQDIQDNMNIGRFGAQFIQDHAVKHQGSKVRVLTHCNTGSLATAGWGTALGIVRELHSR 207
Query: 270 NKIGAAYCTETRPYNQGAR 288
+K+ A+CTETRPYNQGAR
Sbjct: 208 DKLDHAFCTETRPYNQGAR 226
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 23/136 (16%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNELI 75
I D+L L TS+ +N E A + ++++Q A K DN +
Sbjct: 89 ISDRLTLLKTSRPTAVNLFEAADRLLRTVQDAATKAA--------------KDLVDNPIA 134
Query: 76 QLI-------ESMLEKDISDNKAIGRNGAQALID--LNPRVSKLNVLTHCNTGSLATAEY 126
++ E+ML++DI DN IGR GAQ + D + + SK+ VLTHCNTGSLATA +
Sbjct: 135 VIVKAYMDTAEAMLQQDIQDNMNIGRFGAQFIQDHAVKHQGSKVRVLTHCNTGSLATAGW 194
Query: 127 GTALGVIRSLHGANKI 142
GTALG++R LH +K+
Sbjct: 195 GTALGIVRELHSRDKL 210
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I Y + L ILDQL+LP S I D Y AIK+M+VRGAPAIAIV L L V
Sbjct: 6 TLQAIKYSRGHLDILDQLILPFESVYETIKTAHDGYNAIKTMKVRGAPAIAIVAALSLAV 65
Query: 63 DI 64
++
Sbjct: 66 EL 67
>gi|390345348|ref|XP_001199953.2| PREDICTED: methylthioribose-1-phosphate isomerase-like
[Strongylocentrotus purpuratus]
Length = 321
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+ ++ SL A V++ F + L ++ ++ +L +ARPTAVNM A +SL
Sbjct: 50 AIAIVGSLCVA---VELTHMTFENKSDLVAFISKQFRHLNTARPTAVNMSEAVKRF-TSL 105
Query: 189 SEWAKASP---VNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+E P ++K R+I+ E+M+E D+ NK+IG +GA L+ ++ G ++ V+TH
Sbjct: 106 AEELGHDPDLTTESMKDRIIEEAENMMEMDVRTNKSIGMHGANHLM-ISSGGGQV-VMTH 163
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTGSLATA YGTALGVIR+LH + YCTETRPYNQGAR
Sbjct: 164 CNTGSLATAGYGTALGVIRALHEKGNLEHVYCTETRPYNQGAR 206
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 101/186 (54%), Gaps = 53/186 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y++ SL+IL+Q LLP S ++ + +D + AIK M+VRGAPAIAIVG L + V
Sbjct: 2 TLKAIRYKRGSLEILNQKLLPLESVYEELKSADDGFYAIKDMKVRGAPAIAIVGSLCVAV 61
Query: 63 DIK--------------DKQF------------------------------PD------- 71
++ KQF PD
Sbjct: 62 ELTHMTFENKSDLVAFISKQFRHLNTARPTAVNMSEAVKRFTSLAEELGHDPDLTTESMK 121
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ +I+ E+M+E D+ NK+IG +GA L+ ++ ++ V+THCNTGSLATA YGTALG
Sbjct: 122 DRIIEEAENMMEMDVRTNKSIGMHGANHLM-ISSGGGQV-VMTHCNTGSLATAGYGTALG 179
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 180 VIRALH 185
>gi|294462973|gb|ADE77025.1| unknown [Picea sitchensis]
Length = 384
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 103/164 (62%), Gaps = 8/164 (4%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA----DSV 184
A+ + +L A ++ ++ + ND++ ++ ++L++LVS+RPTAVN+ AA D V
Sbjct: 61 AIAISAALSLAVEVANLGSVDWSVNDAI-SFLQKRLEFLVSSRPTAVNLSDAATKLNDVV 119
Query: 185 KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLT 244
+ ++ +K + ++ E ML DI NKAIG NGA+ ++ L+VLT
Sbjct: 120 LKATNDMSKP---EAIFQAYVEAAEGMLIDDIDTNKAIGSNGAKFILSQTQKCHNLHVLT 176
Query: 245 HCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
HCNTGSLATA YGTALGVIR+LH + A+CTETRPYNQG+R
Sbjct: 177 HCNTGSLATAGYGTALGVIRALHSEGLLETAFCTETRPYNQGSR 220
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 88/187 (47%), Gaps = 52/187 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
+LQSI Y + L++LDQ LPH S +DI + + AI M VRGAPAIAI L L
Sbjct: 13 TLQSIRYSRGRLQLLDQRKLPHDSVYIDIQDSTAGWHAIHDMVVRGAPAIAISAALSLAV 72
Query: 61 -VVDIKDKQFPDNELIQLI----------------------------------------- 78
V ++ + N+ I +
Sbjct: 73 EVANLGSVDWSVNDAISFLQKRLEFLVSSRPTAVNLSDAATKLNDVVLKATNDMSKPEAI 132
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
E ML DI NKAIG NGA+ ++ + L+VLTHCNTGSLATA YGTAL
Sbjct: 133 FQAYVEAAEGMLIDDIDTNKAIGSNGAKFILSQTQKCHNLHVLTHCNTGSLATAGYGTAL 192
Query: 131 GVIRSLH 137
GVIR+LH
Sbjct: 193 GVIRALH 199
>gi|388521661|gb|AFK48892.1| unknown [Medicago truncatula]
Length = 304
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 90/131 (68%), Gaps = 2/131 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLEKDIS 217
++ +KLDYLVS+RPTAVN+ AA +K +S+ A S V ++ E MLE D++
Sbjct: 88 FLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEARGVFQAYLEAAEIMLEDDVA 147
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
N+AIG GA + + + KL+VLTHCNTGSLATA YGTALGVIR+L+ + AYC
Sbjct: 148 SNRAIGTYGASFIQNQTEKL-KLSVLTHCNTGSLATAGYGTALGVIRALYSGGVLERAYC 206
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 207 TETRPFNQGSR 217
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 90/186 (48%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA---------- 53
LQ+I Y + SL++LDQ LP S ++I + D + AI+ M VRGAPAIA
Sbjct: 12 LQTIRYNRGSLQLLDQTKLPLESVYLEIRDSNDGWNAIRDMVVRGAPAIAIAAALSLAVE 71
Query: 54 ------------------------IVGCLGLVVDIKDKQFPDNELIQ-----------LI 78
+V V++ D E+I +
Sbjct: 72 VSNLDDFNGSTDDAVYFLQKKLDYLVSSRPTAVNLSDAATKLKEIISKAAATTSEARGVF 131
Query: 79 ESMLEK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++ LE D++ N+AIG GA + + ++ KL+VLTHCNTGSLATA YGTALG
Sbjct: 132 QAYLEAAEIMLEDDVASNRAIGTYGASFIQNQTEKL-KLSVLTHCNTGSLATAGYGTALG 190
Query: 132 VIRSLH 137
VIR+L+
Sbjct: 191 VIRALY 196
>gi|313471330|sp|C0S1C8.1|MTNA_PARBP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|225680790|gb|EEH19074.1| methylthioribose-1-phosphate isomerase [Paracoccidioides
brasiliensis Pb03]
Length = 386
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 102/172 (59%), Gaps = 12/172 (6%)
Query: 129 ALGVIRSLHGANKIVDI--KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKS 186
A+ ++ +L A ++ D+ K K +E ++ EKL+Y+ S+RPTAVN+ AA +
Sbjct: 50 AIAIVAALSVAVELYDLIQKGKLSDQAKEVEIFIREKLEYIASSRPTAVNLVEAAGRLGK 109
Query: 187 SLSEWAKASPVN--TVKTRLIQLIESMLEKDISDNKAIGRNGAQALID--------LNPG 236
+ + V V I+ E MLE D+ DN+ IG GA+ ++ G
Sbjct: 110 IVVARSCGEGVTGREVAEEYIRAAEKMLEDDVKDNRGIGEFGAKWIMKQAIDGAEGEGEG 169
Query: 237 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
K+ VLTHCNTGSLATA YGTALGVIRSLH AN + AYCTETRPYNQG+R
Sbjct: 170 KGKVAVLTHCNTGSLATAGYGTALGVIRSLHAANSLKHAYCTETRPYNQGSR 221
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 8/79 (10%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALID--------LNPRVSKLNVLTHCNTGSLAT 123
E I+ E MLE D+ DN+ IG GA+ ++ K+ VLTHCNTGSLAT
Sbjct: 127 EEYIRAAEKMLEDDVKDNRGIGEFGAKWIMKQAIDGAEGEGEGKGKVAVLTHCNTGSLAT 186
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSLH AN +
Sbjct: 187 AGYGTALGVIRSLHAANSL 205
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I Y L IL+QL LPH + I + DA+ AI M+VRGAPAIAIV L + V+
Sbjct: 3 LIAISYSHGKLSILNQLFLPHQTTYDPIYSACDAWHAIHDMRVRGAPAIAIVAALSVAVE 62
Query: 64 IKD--KQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTG 119
+ D ++ ++ + +E + + + + A R A L++ R+ K+ V C G
Sbjct: 63 LYDLIQKGKLSDQAKEVEIFIREKL-EYIASSRPTAVNLVEAAGRLGKIVVARSCGEG 119
>gi|47223861|emb|CAG06038.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 99/175 (56%), Gaps = 48/175 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+IL+QLLLP + D+ +V+DAY+AIKSM+VRGAPAIAIVGCL L V
Sbjct: 2 TLEAIRYRAGSLQILNQLLLPRQTVYDDLRSVQDAYEAIKSMRVRGAPAIAIVGCLSLAV 61
Query: 63 DIKD-----------------------------------KQFPDNE------------LI 75
+++ +F +NE +I
Sbjct: 62 ELRAGAGGDDPVAFIRESLCHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVI 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
IE MLE+DI+DNK IG GAQ ++ PR S + +LTHCNTGSLATA YGTAL
Sbjct: 122 TWIEDMLERDINDNKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTAL 175
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ E L +L SARPTAVNM RAA + + ++ +I IE MLE+DI+D
Sbjct: 75 FIRESLCHLTSARPTAVNMGRAARELMEFAENESMEKNSEQLRESVITWIEDMLERDIND 134
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
NK IG GAQ ++ P S + +LTHCNTGSLATA YGTAL + H N++ YCT
Sbjct: 135 NKKIGNYGAQHILSGVPRDS-VTILTHCNTGSLATAGYGTAL----ASHALNRLKRVYCT 189
Query: 279 ETRPYNQGAR 288
ETRPYNQG+R
Sbjct: 190 ETRPYNQGSR 199
>gi|21593194|gb|AAM65143.1| putative translation initiation factor eIF-2B alpha subunit
[Arabidopsis thaliana]
Length = 374
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/131 (51%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++ KLDYLVS+RPTAVN+ AA +K +++ A A+ ++ I+ E MLE D+
Sbjct: 85 FLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSIFKAYIEASEDMLEDDVV 144
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKAIG G L KL+VLTHCN GSLATA YGTALGVIR+LH + AYC
Sbjct: 145 SNKAIGNFGLSLLRQQAKNPDKLSVLTHCNXGSLATAGYGTALGVIRALHTQGILERAYC 204
Query: 278 TETRPYNQGAR 288
TETRP+NQG+R
Sbjct: 205 TETRPFNQGSR 215
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 89/187 (47%), Gaps = 52/187 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y+ SL++LDQ LP + ++I + D + AI+ M VRGAPAIAI L L V
Sbjct: 8 TLKAICYKPGSLQLLDQRKLPLETIYLEIRDASDGWSAIQEMVVRGAPAIAIATALSLAV 67
Query: 63 DIKDKQ-----------FPDNELIQLI--------------------------------- 78
++ + F +N+L L+
Sbjct: 68 EVFNFHGFDGSASDAVAFLENKLDYLVSSRPTAVNLADAALKLKHVIAKALATATEAKSI 127
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
E MLE D+ NKAIG G L KL+VLTHCN GSLATA YGTAL
Sbjct: 128 FKAYIEASEDMLEDDVVSNKAIGNFGLSLLRQQAKNPDKLSVLTHCNXGSLATAGYGTAL 187
Query: 131 GVIRSLH 137
GVIR+LH
Sbjct: 188 GVIRALH 194
>gi|315045634|ref|XP_003172192.1| methylthioribose-1-phosphate isomerase [Arthroderma gypseum CBS
118893]
gi|311342578|gb|EFR01781.1| methylthioribose-1-phosphate isomerase [Arthroderma gypseum CBS
118893]
Length = 385
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNT-VKTRL 204
DK + D +E Y+ EKLDYLV++RPTAVN+ AA +K+ + + P +
Sbjct: 70 DKLSAEADEVEAYILEKLDYLVTSRPTAVNLSDAAIKLKALVQTRKQIGDPKGKDLAEAY 129
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGTALG 261
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGTALG
Sbjct: 130 VEAAEKMLIDDAMDNHRLGDFGAAWIVNNTPVGKEGKKVGVLTHCNTGSLATAGYGTALG 189
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIRSL ++K+ AYCTETRPYNQGAR
Sbjct: 190 VIRSLLASDKLEHAYCTETRPYNQGAR 216
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 94/199 (47%), Gaps = 59/199 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +
Sbjct: 2 SLQSIRYKRGMLQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSI 61
Query: 63 DIKD-------------------------------------------------KQFPDNE 73
++ + KQ D +
Sbjct: 62 ELTELMDHDKLSAEADEVEAYILEKLDYLVTSRPTAVNLSDAAIKLKALVQTRKQIGDPK 121
Query: 74 LIQLIES-------MLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
L E+ ML D DN +G GA +++ P K+ VLTHCNTGSLAT
Sbjct: 122 GKDLAEAYVEAAEKMLIDDAMDNHRLGDFGAAWIVNNTPVGKEGKKVGVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSL ++K+
Sbjct: 182 AGYGTALGVIRSLLASDKL 200
>gi|327304533|ref|XP_003236958.1| methylthioribose-1-phosphate isomerase [Trichophyton rubrum CBS
118892]
gi|326459956|gb|EGD85409.1| methylthioribose-1-phosphate isomerase [Trichophyton rubrum CBS
118892]
Length = 385
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 95/150 (63%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
+K + + +E ++ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 70 EKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQ---KRKQIGDPKGKDLA 126
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 127 EAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLATAGYGT 186
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSLH ++K+ AYCTETRPYNQGAR
Sbjct: 187 ALGVIRSLHASDKLEHAYCTETRPYNQGAR 216
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 94/199 (47%), Gaps = 59/199 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +
Sbjct: 2 SLQSIRYKRGMLQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSI 61
Query: 63 DI-------------------------------------------------KDKQFPD-- 71
++ K KQ D
Sbjct: 62 ELTELMDHEKLSAEANEVEAFILEKLDYLVTSRPTAVNLSDAAIKLKALVQKRKQIGDPK 121
Query: 72 -----NELIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLAT
Sbjct: 122 GKDLAEAYVEAAEKMLIDDAMDNHRLGDFGAAWIMNNTPVGKDGKKVGVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSLH ++K+
Sbjct: 182 AGYGTALGVIRSLHASDKL 200
>gi|225444690|ref|XP_002277806.1| PREDICTED: methylthioribose-1-phosphate isomerase [Vitis vinifera]
gi|317412019|sp|D7TCD0.2|MTNA_VITVI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
Length = 376
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESM 211
+D ++ KLDYLV++RPTAVN+ A +K +S A A +V ++ E M
Sbjct: 82 SDDAASFLNSKLDYLVTSRPTAVNLSDAVTKLKGVISNAAATAFEAMSVFQAFLEAAEDM 141
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L +D++ N+AIG GA L L++LTHCNTGSLATA YGTALGVIRS+H
Sbjct: 142 LREDVAANRAIGLYGASFLQSHIKDSKNLSILTHCNTGSLATAGYGTALGVIRSVHAEGI 201
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYCTETRP+NQG+R
Sbjct: 202 LLRAYCTETRPFNQGSR 218
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 93/187 (49%), Gaps = 52/187 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ SL++LDQ LP + ++I +D + AI+ M VRGAPAIAI L L V
Sbjct: 11 SLQSICYKRGSLQLLDQRKLPLETVYLEIKGADDGWHAIRDMVVRGAPAIAIAAALSLAV 70
Query: 63 DIKDKQ-----------FPDNELIQLIES------------------------------- 80
++ + + F +++L L+ S
Sbjct: 71 EVSNLEDFIGTSDDAASFLNSKLDYLVTSRPTAVNLSDAVTKLKGVISNAAATAFEAMSV 130
Query: 81 ----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
ML +D++ N+AIG GA L L++LTHCNTGSLATA YGTAL
Sbjct: 131 FQAFLEAAEDMLREDVAANRAIGLYGASFLQSHIKDSKNLSILTHCNTGSLATAGYGTAL 190
Query: 131 GVIRSLH 137
GVIRS+H
Sbjct: 191 GVIRSVH 197
>gi|297738543|emb|CBI27788.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESM 211
+D ++ KLDYLV++RPTAVN+ A +K +S A A +V ++ E M
Sbjct: 124 SDDAASFLNSKLDYLVTSRPTAVNLSDAVTKLKGVISNAAATAFEAMSVFQAFLEAAEDM 183
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L +D++ N+AIG GA L L++LTHCNTGSLATA YGTALGVIRS+H
Sbjct: 184 LREDVAANRAIGLYGASFLQSHIKDSKNLSILTHCNTGSLATAGYGTALGVIRSVHAEGI 243
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYCTETRP+NQG+R
Sbjct: 244 LLRAYCTETRPFNQGSR 260
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 93/187 (49%), Gaps = 52/187 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ SL++LDQ LP + ++I +D + AI+ M VRGAPAIAI L L V
Sbjct: 53 SLQSICYKRGSLQLLDQRKLPLETVYLEIKGADDGWHAIRDMVVRGAPAIAIAAALSLAV 112
Query: 63 DIKDKQ-----------FPDNELIQLIES------------------------------- 80
++ + + F +++L L+ S
Sbjct: 113 EVSNLEDFIGTSDDAASFLNSKLDYLVTSRPTAVNLSDAVTKLKGVISNAAATAFEAMSV 172
Query: 81 ----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
ML +D++ N+AIG GA L L++LTHCNTGSLATA YGTAL
Sbjct: 173 FQAFLEAAEDMLREDVAANRAIGLYGASFLQSHIKDSKNLSILTHCNTGSLATAGYGTAL 232
Query: 131 GVIRSLH 137
GVIRS+H
Sbjct: 233 GVIRSVH 239
>gi|296805355|ref|XP_002843502.1| methylthioribose-1-phosphate isomerase [Arthroderma otae CBS
113480]
gi|313471367|sp|C5FY68.1|MTNA_NANOT RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238844804|gb|EEQ34466.1| methylthioribose-1-phosphate isomerase [Arthroderma otae CBS
113480]
Length = 385
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 11/150 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--- 203
+K + D +E Y+ EKLDYLV++RPTAVN+ AA +K+ + K + K +
Sbjct: 70 EKLSTEADEVEAYILEKLDYLVTSRPTAVNLSDAAIKLKTLVQ---KRKQIGDPKGKDLA 126
Query: 204 --LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGT 258
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLATA YGT
Sbjct: 127 EAYVEAAEKMLIDDAMDNHRLGDFGATWIVNNTPVGKEGKKVGVLTHCNTGSLATAGYGT 186
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIRSL ++K+ AYCTETRPYNQGAR
Sbjct: 187 ALGVIRSLLASDKLEHAYCTETRPYNQGAR 216
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 94/199 (47%), Gaps = 59/199 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQSI Y++ L++LDQL +PH + + ++ ++ + IK M VRGAPAIAIV L L +
Sbjct: 2 SLQSIRYKRGMLQVLDQLQVPHVERYIPVSTAKEGWHVIKEMHVRGAPAIAIVAVLSLSI 61
Query: 63 DI-------------------------------------------------KDKQFPDNE 73
++ K KQ D +
Sbjct: 62 ELTELMDHEKLSTEADEVEAYILEKLDYLVTSRPTAVNLSDAAIKLKTLVQKRKQIGDPK 121
Query: 74 -------LIQLIESMLEKDISDNKAIGRNGAQALIDLNP---RVSKLNVLTHCNTGSLAT 123
++ E ML D DN +G GA +++ P K+ VLTHCNTGSLAT
Sbjct: 122 GKDLAEAYVEAAEKMLIDDAMDNHRLGDFGATWIVNNTPVGKEGKKVGVLTHCNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANKI 142
A YGTALGVIRSL ++K+
Sbjct: 182 AGYGTALGVIRSLLASDKL 200
>gi|407921561|gb|EKG14703.1| Initiation factor 2B-related protein [Macrophomina phaseolina MS6]
Length = 383
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 96/140 (68%), Gaps = 6/140 (4%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ ++ +V EKL YLV++RPTAVN+ AA + ++ A A + +VK ++ E M
Sbjct: 77 EEVKVFVEEKLSYLVTSRPTAVNLADAARKLNKTVDAAASAQDASGLSVKDAYVKAAEKM 136
Query: 212 LEKDISDNKAIGRNGAQALI---DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
L D+SDN+ IG++GA+ ++ + G +++V+THCNTGSLATA YGTALGVIRSLH
Sbjct: 137 LVDDVSDNENIGKHGAEWIVKNTEAGKG-GQVSVVTHCNTGSLATAGYGTALGVIRSLHA 195
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 196 TGTLRHAFCTETRPYNQGSR 215
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 101/193 (52%), Gaps = 60/193 (31%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y++ SL+ILDQL LPH ++++ +DA+ AIK M+ RGAPAIAIV LGL V+
Sbjct: 3 LQAIKYQRGSLQILDQLRLPHEEVYDEVHSAQDAWHAIKEMRTRGAPAIAIVAALGLAVE 62
Query: 64 IKD--------------KQFPDNELIQLI------------------------------- 78
++ K F + +L L+
Sbjct: 63 LETIAAKNELSSVAEEVKVFVEEKLSYLVTSRPTAVNLADAARKLNKTVDAAASAQDASG 122
Query: 79 -----------ESMLEKDISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATA 124
E ML D+SDN+ IG++GA+ ++ N K ++V+THCNTGSLATA
Sbjct: 123 LSVKDAYVKAAEKMLVDDVSDNENIGKHGAEWIVK-NTEAGKGGQVSVVTHCNTGSLATA 181
Query: 125 EYGTALGVIRSLH 137
YGTALGVIRSLH
Sbjct: 182 GYGTALGVIRSLH 194
>gi|340382034|ref|XP_003389526.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Amphimedon
queenslandica]
Length = 352
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 88/149 (59%), Gaps = 6/149 (4%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA---DSVKSSLSEWAKASPVNT 199
V++K + F L +V E YL SARPTAVN+ AA + L E K P
Sbjct: 63 VELKKRNFLSLSELSSFVNESFSYLQSARPTAVNITEAAKRFSEITQGLVERIK-DPKKA 121
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
L E ML++DIS N +IGRNGA+ ++ G + +LTHCNTGSLA A YGTA
Sbjct: 122 CDILYKNLYE-MLQEDISTNTSIGRNGAEHILTQYSG-GDVTILTHCNTGSLACAGYGTA 179
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIRSL ++ YCTETRPYNQG+R
Sbjct: 180 LGVIRSLQEKGRLKQVYCTETRPYNQGSR 208
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 98/187 (52%), Gaps = 53/187 (28%)
Query: 3 SLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SLQSI+++K L IL+QLLLP S +IN V+DA+ AIK+M+ RGAPAIAIVG L +
Sbjct: 2 SLQSIVFDKEEGKLSILNQLLLPDVSLYEEINTVQDAWDAIKNMKTRGAPAIAIVGALSI 61
Query: 61 VVDIKDKQFPD--------NELIQLIES-------------------------------- 80
V++K + F NE ++S
Sbjct: 62 AVELKKRNFLSLSELSSFVNESFSYLQSARPTAVNITEAAKRFSEITQGLVERIKDPKKA 121
Query: 81 ----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
ML++DIS N +IGRNGA+ ++ + +LTHCNTGSLA A YGTAL
Sbjct: 122 CDILYKNLYEMLQEDISTNTSIGRNGAEHILT-QYSGGDVTILTHCNTGSLACAGYGTAL 180
Query: 131 GVIRSLH 137
GVIRSL
Sbjct: 181 GVIRSLQ 187
>gi|361130875|gb|EHL02612.1| putative Methylthioribose-1-phosphate isomerase [Glarea lozoyensis
74030]
Length = 441
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 97/171 (56%), Gaps = 34/171 (19%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA------KASPVNTVKTRLI 205
++ L KY+ KLDYL+ +RPTAV++ A +KS A +A+ V+T I
Sbjct: 73 NSQELVKYINSKLDYLMGSRPTAVDLSNAIKLLKSRTQNAASNSTSDEAASCANVRTVFI 132
Query: 206 QLIESMLEKDISDNKAIGRNGAQAL----------IDLN----------PGVS------- 238
++ E +LE D + N AIGR GA+ L +D PG
Sbjct: 133 EVAEKILEDDYTTNLAIGRYGAEYLRRQQRAIVTPVDAEAELRYYTTSPPGTQGLPDRTY 192
Query: 239 -KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
KL+VLTHCNTGSLAT+ +GTALG+IRSLH N + AYCTETRPYNQG+R
Sbjct: 193 RKLSVLTHCNTGSLATSGHGTALGIIRSLHKMNYLDHAYCTETRPYNQGSR 243
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 50/99 (50%), Gaps = 32/99 (32%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGA------------------------------QALIDL 103
I++ E +LE D + N AIGR GA Q L D
Sbjct: 131 FIEVAEKILEDDYTTNLAIGRYGAEYLRRQQRAIVTPVDAEAELRYYTTSPPGTQGLPDR 190
Query: 104 NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
R KL+VLTHCNTGSLAT+ +GTALG+IRSLH N +
Sbjct: 191 TYR--KLSVLTHCNTGSLATSGHGTALGIIRSLHKMNYL 227
>gi|390345338|ref|XP_003726311.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase-like [Strongylocentrotus purpuratus]
Length = 376
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+ ++ SL A V++ F + L ++ ++ +L +ARPTAVNM A + +SL
Sbjct: 71 AIAIVGSLCVA---VELTHMTFENKSDLVAFISKQFRHLNTARPTAVNMSEAVKRL-TSL 126
Query: 189 SEWAKASP---VNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+E P ++K R+I+ E+M+E D+ NK+IG +GA + ++ G ++ V+TH
Sbjct: 127 AEELGNDPDLTTESMKDRIIEEAENMMEMDVRTNKSIGMHGANHXM-ISSGGGQV-VMTH 184
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTGSLATA YGTALGVIR+LH + YCTETRPYNQGAR
Sbjct: 185 CNTGSLATAGYGTALGVIRALHEKGNLEHVYCTETRPYNQGAR 227
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 100/186 (53%), Gaps = 53/186 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y++ SL+IL+Q LLP S ++ + +D + AIK M+VRGAPAIAIVG L + V
Sbjct: 23 TLKAIRYKRGSLEILNQKLLPLESVYEELKSADDGFYAIKDMKVRGAPAIAIVGSLCVAV 82
Query: 63 DIK--------------DKQF------------------------------PD------- 71
++ KQF PD
Sbjct: 83 ELTHMTFENKSDLVAFISKQFRHLNTARPTAVNMSEAVKRLTSLAEELGNDPDLTTESMK 142
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ +I+ E+M+E D+ NK+IG +GA + ++ ++ V+THCNTGSLATA YGTALG
Sbjct: 143 DRIIEEAENMMEMDVRTNKSIGMHGANHXM-ISSGGGQV-VMTHCNTGSLATAGYGTALG 200
Query: 132 VIRSLH 137
VIR+LH
Sbjct: 201 VIRALH 206
>gi|451848710|gb|EMD62015.1| hypothetical protein COCSADRAFT_38815 [Cochliobolus sativus ND90Pr]
Length = 392
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 91/139 (65%), Gaps = 4/139 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ ++ ++ EKLDYLV++RPTAVN+ AA ++ A N V+ + E M
Sbjct: 73 EEVKVFIIEKLDYLVTSRPTAVNLADAAGKLRKITENAAAKEEANGEAVREAYVAAAEQM 132
Query: 212 LEKDISDNKAIGRNGAQALI-DLNPG-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
L D+SDN++IG++GA ++ + G + ++THCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LVDDVSDNESIGKHGADWIVKNTEAGKAGPVGMMTHCNTGSLATAGYGTALGVIRSLHAN 192
Query: 270 NKIGAAYCTETRPYNQGAR 288
+ A+C+ETRPYNQG+R
Sbjct: 193 GSLKHAFCSETRPYNQGSR 211
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 93/189 (49%), Gaps = 56/189 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I Y + L+ILDQL LPH + I + DA+ AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LHAIKYSRGQLEILDQLKLPHAEEYDHIYSSTDAWHAIKDMRTRGAPAIAIVAALALAVE 62
Query: 64 IKDKQFPD------------------------------NELIQLIESMLEKD-------- 85
+ + + P +L ++ E+ K+
Sbjct: 63 LTNMKLPSAAEEVKVFIIEKLDYLVTSRPTAVNLADAAGKLRKITENAAAKEEANGEAVR 122
Query: 86 --------------ISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGT 128
+SDN++IG++GA ++ N K + ++THCNTGSLATA YGT
Sbjct: 123 EAYVAAAEQMLVDDVSDNESIGKHGADWIVK-NTEAGKAGPVGMMTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLH 137
ALGVIRSLH
Sbjct: 182 ALGVIRSLH 190
>gi|451998527|gb|EMD90991.1| hypothetical protein COCHEDRAFT_1176662 [Cochliobolus
heterostrophus C5]
Length = 392
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 4/139 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIESM 211
+ ++ ++ EKLDYLV++RPTAVN+ AA ++ A N V+ + E M
Sbjct: 73 EEVKVFIIEKLDYLVTSRPTAVNLADAAGKLQKITENAAAKEGANGEAVREAYVAAAEQM 132
Query: 212 LEKDISDNKAIGRNGAQALI-DLNPG-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
L D+SDN++IG++GA ++ + G ++++THCNTGSLATA YGTALGVIRSLH
Sbjct: 133 LVDDVSDNESIGKHGADWIVKNTEAGKTGPVSMMTHCNTGSLATAGYGTALGVIRSLHAN 192
Query: 270 NKIGAAYCTETRPYNQGAR 288
+ A+C+ETRPYNQG+R
Sbjct: 193 GSLKHAFCSETRPYNQGSR 211
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 95/189 (50%), Gaps = 56/189 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y + L+ILDQL LPH + I + DA+ AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LQAIKYSRGQLEILDQLKLPHAEEYDHIYSSTDAWHAIKDMRTRGAPAIAIVAALALAVE 62
Query: 64 IKDKQFPD------------------------------NELIQLIESMLEK--------- 84
+ + + P +L ++ E+ K
Sbjct: 63 VTNMKLPSAAEEVKVFIIEKLDYLVTSRPTAVNLADAAGKLQKITENAAAKEGANGEAVR 122
Query: 85 -------------DISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGT 128
D+SDN++IG++GA ++ N K ++++THCNTGSLATA YGT
Sbjct: 123 EAYVAAAEQMLVDDVSDNESIGKHGADWIVK-NTEAGKTGPVSMMTHCNTGSLATAGYGT 181
Query: 129 ALGVIRSLH 137
ALGVIRSLH
Sbjct: 182 ALGVIRSLH 190
>gi|384489942|gb|EIE81164.1| S-methyl-5-thioribose-1-phosphate isomerase [Rhizopus delemar RA
99-880]
Length = 377
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTVKTRLIQL 207
+F + + +++ + L+YL ++RPTAVN+ AA +++ + AK A TV I+
Sbjct: 77 EFSTVEQVVQFLKDALEYLKTSRPTAVNLFDAAAKLEALIESTAKEAKEPATVVYAYIEA 136
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E ML D+ DNK IGR GA+ + + + VLTHCNTGSLATA +GTALG+IR LH
Sbjct: 137 AEKMLVDDVQDNKNIGRLGAEYITNHVKDKGDIAVLTHCNTGSLATAGWGTALGIIRDLH 196
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ AYCTETRPYNQG+R
Sbjct: 197 ANGQLKHAYCTETRPYNQGSR 217
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 95/191 (49%), Gaps = 54/191 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K+L++I Y + +L+IL+QL+LPH + + N+++ + AIK+M+ RGAPAIAIV L L
Sbjct: 7 KTLEAIQYTRGNLRILNQLVLPHETVFESVCNIQNGHAAIKTMKTRGAPAIAIVAALSLA 66
Query: 62 VDIKDK-------------QFPDNEL---------------------------------- 74
VD+ + QF + L
Sbjct: 67 VDVNSRFEKGEFSTVEQVVQFLKDALEYLKTSRPTAVNLFDAAAKLEALIESTAKEAKEP 126
Query: 75 -------IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYG 127
I+ E ML D+ DNK IGR GA+ + + + VLTHCNTGSLATA +G
Sbjct: 127 ATVVYAYIEAAEKMLVDDVQDNKNIGRLGAEYITNHVKDKGDIAVLTHCNTGSLATAGWG 186
Query: 128 TALGVIRSLHG 138
TALG+IR LH
Sbjct: 187 TALGIIRDLHA 197
>gi|391333931|ref|XP_003741363.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Metaseiulus
occidentalis]
Length = 355
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNKA 221
LD+LV++RPTAVNMK AA+ K+ S N R +I+ E M +D+ NK+
Sbjct: 87 LDHLVTSRPTAVNMKNAAEEFKALSSSLLNDVDTNGTSHRQKIIEAAEDMYRRDVETNKS 146
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ R GA+ ++ P K+NVLT CNTGSLATA YGTALGVIR LH N++ AY TETR
Sbjct: 147 LARFGAEYILRAIPA-GKVNVLTVCNTGSLATAGYGTALGVIRKLHEENRLETAYFTETR 205
Query: 282 PYNQGAR 288
PYNQG R
Sbjct: 206 PYNQGER 212
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 52/188 (27%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV---- 61
+I YE+ SL+ILDQL LP ++++ I ++DA+ AI MQVRGAPAIAIVG L +
Sbjct: 10 AIFYERGSLRILDQLSLPEKTEMIQIRTIDDAWNAINKMQVRGAPAIAIVGVLSVAVLLE 69
Query: 62 ----------------------------VDIKD--KQFP-----------------DNEL 74
V++K+ ++F ++
Sbjct: 70 RMETEEKAEIHREIVRALDHLVTSRPTAVNMKNAAEEFKALSSSLLNDVDTNGTSHRQKI 129
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
I+ E M +D+ NK++ R GA+ ++ P K+NVLT CNTGSLATA YGTALGVIR
Sbjct: 130 IEAAEDMYRRDVETNKSLARFGAEYILRAIP-AGKVNVLTVCNTGSLATAGYGTALGVIR 188
Query: 135 SLHGANKI 142
LH N++
Sbjct: 189 KLHEENRL 196
>gi|255647295|gb|ACU24114.1| unknown [Glycine max]
Length = 213
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLEKDISDNK 220
+KL+YLV++RPTAVN+ AA +K +S A S +V I E MLE D++ N+
Sbjct: 91 KKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVFQVYIDAAEVMLEDDVASNR 150
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
AIG GA ++I KL+VLTHCNTGSLATA YGTALGVIR+LH A + AYCTET
Sbjct: 151 AIGSYGA-SIIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSAGVLKRAYCTET 209
Query: 281 RPYN 284
RP+N
Sbjct: 210 RPFN 213
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 93/188 (49%), Gaps = 52/188 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+LQ+I Y++ SL++LDQ LP + ++I + D + AI+ M VRGAPAIAI L L V
Sbjct: 12 TLQAICYKRGSLQLLDQRKLPLETVYLEIRDSTDGWNAIREMVVRGAPAIAIAAALSLAV 71
Query: 63 DIKDKQF--PDNELIQLIESMLE------------------------------------- 83
++ + F + + L++ LE
Sbjct: 72 EVFNLDFNGSATDAVSLLQKKLEYLVTSRPTAVNLSDAATKLKEVISNAAATTSEGRSVF 131
Query: 84 ------------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
D++ N+AIG GA ++I KL+VLTHCNTGSLATA YGTALG
Sbjct: 132 QVYIDAAEVMLEDDVASNRAIGSYGA-SIIQQQTEKQKLSVLTHCNTGSLATAGYGTALG 190
Query: 132 VIRSLHGA 139
VIR+LH A
Sbjct: 191 VIRALHSA 198
>gi|313235428|emb|CBY10943.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 97/177 (54%), Gaps = 39/177 (22%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL +I Y+ L ILDQL LP S+ + IN+VED ++AIK M VRGAPAIAIVGCL + V
Sbjct: 2 SLGAIKYQNGKLTILDQLKLPLFSEYLKINSVEDGFRAIKDMNVRGAPAIAIVGCLTVAV 61
Query: 63 DIKDKQFPDNE-------------------------------------LIQLIESMLEKD 85
++ K+F + + L+ +ES + D
Sbjct: 62 AVQKKEFENTKEFAKHDVKLINKKICNDDFSAKQLKDFQKWILGLWKNLLSKLESEMAAD 121
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+ NK IG +GA ++ L + +LTHCNTGSLATA YGTALGVIRSL NK+
Sbjct: 122 VKTNKLIGDHGAAEIVKL--LGDDVTILTHCNTGSLATAGYGTALGVIRSLQRENKL 176
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
L+ +ES + D+ NK IG +GA ++ L + +LTHCNTGSLATA YGTALGVI
Sbjct: 110 LLSKLESEMAADVKTNKLIGDHGAAEIVKLLG--DDVTILTHCNTGSLATAGYGTALGVI 167
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RSL NK+ +CTETRPYNQGAR
Sbjct: 168 RSLQRENKLKHVFCTETRPYNQGAR 192
>gi|320169618|gb|EFW46517.1| translation initiation factor eif-2b [Capsaspora owczarzaki ATCC
30864]
Length = 361
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 4/161 (2%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM-KRAADSVKSS 187
A+ ++ +L A ++ +P+ ++ +V + L ++RPTAVN+ + A+ +
Sbjct: 54 AIAIVAALSVAVELAAAPRAAWPNAQAVADHVRLAFEALCTSRPTAVNLSEAASALTARA 113
Query: 188 LSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCN 247
+ A + V+T L++ +E ML KD++DN+AIG +G A++ S+ +LTHCN
Sbjct: 114 AALAASNASVDTTVDALLKAMEDMLLKDVADNRAIGAHGRAAILAAK---SQAAMLTHCN 170
Query: 248 TGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TGSLATA YGTALG+IR+LH K+ AYCTETRPYNQGAR
Sbjct: 171 TGSLATAGYGTALGIIRALHETGKLSHAYCTETRPYNQGAR 211
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 97/193 (50%), Gaps = 56/193 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL ILDQL LP + V I + A+ AI+SMQVRGAPAIAIV L + V
Sbjct: 6 TLEAIRYTRGSLDILDQLQLPAQTVYVSIPDSRAAWTAIRSMQVRGAPAIAIVAALSVAV 65
Query: 63 DI---KDKQFPDNELI-------------------------------------------- 75
++ +P+ + +
Sbjct: 66 ELAAAPRAAWPNAQAVADHVRLAFEALCTSRPTAVNLSEAASALTARAAALAASNASVDT 125
Query: 76 ------QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
+ +E ML KD++DN+AIG +G A++ S+ +LTHCNTGSLATA YGTA
Sbjct: 126 TVDALLKAMEDMLLKDVADNRAIGAHGRAAILAAK---SQAAMLTHCNTGSLATAGYGTA 182
Query: 130 LGVIRSLHGANKI 142
LG+IR+LH K+
Sbjct: 183 LGIIRALHETGKL 195
>gi|378725532|gb|EHY51991.1| S-methyl-5-thioribose-1-phosphate isomerase [Exophiala dermatitidis
NIH/UT8656]
Length = 396
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 91/149 (61%), Gaps = 12/149 (8%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK--SSLSEWAKASPVNTVKTRLIQLI 208
P D ++ + ++L+YL ++RPTAVN+ A +K + + + ++V I
Sbjct: 80 PSADETKETISQRLEYLKTSRPTAVNLGDAVGKLKILAKKAAMQSGASADSVAQAYITAA 139
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSK---------LNVLTHCNTGSLATAEYGTA 259
E ML D++DNKAIG +GA+ I+ N + L VLTHCNTGSLATA YGTA
Sbjct: 140 ERMLVDDVADNKAIGAHGAR-WIEENTVAGRQRRQDKAHELEVLTHCNTGSLATAGYGTA 198
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIRSL N + AYCTETRPYNQG+R
Sbjct: 199 LGVIRSLRAGNMLTRAYCTETRPYNQGSR 227
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 10/78 (12%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNP---------RVSKLNVLTHCNTGSLATAE 125
I E ML D++DNKAIG +GA+ I+ N + +L VLTHCNTGSLATA
Sbjct: 136 ITAAERMLVDDVADNKAIGAHGAR-WIEENTVAGRQRRQDKAHELEVLTHCNTGSLATAG 194
Query: 126 YGTALGVIRSLHGANKIV 143
YGTALGVIRSL N +
Sbjct: 195 YGTALGVIRSLRAGNMLT 212
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 4 LQSIIYEKHS------LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
LQ+I YE S L ILDQLLLPH + I + E A+ AIK M+VRGAP
Sbjct: 3 LQAIKYEPASGPSPPTLHILDQLLLPHRTTYEAITDCEQAHAAIKQMKVRGAP 55
>gi|313220671|emb|CBY31516.1| unnamed protein product [Oikopleura dioica]
Length = 342
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
V ++ K+F + L ++V + LV+ARPTAVNM A+ + S+ +N
Sbjct: 61 VAVQKKEFENTKELAEFVKTSFERLVAARPTAVNMTFASKIINLSILFLNNFHFLN---- 116
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
L+ +ES + D+ NK IG +GA ++ L + +LTHCNTGSLATA YGTALGV
Sbjct: 117 -LLSKLESEMASDVKTNKLIGDHGAAEIVKLLG--DNVTILTHCNTGSLATAGYGTALGV 173
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IRSL NK+ +CTETRPYNQGAR
Sbjct: 174 IRSLQRENKLKHVFCTETRPYNQGAR 199
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 98/184 (53%), Gaps = 46/184 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I YE L ILDQL LP + + IN+VED ++AIK M VRGAPAIAIVGCL + V
Sbjct: 2 TLEAIKYENGKLMILDQLKLPLFLEYIKINSVEDGFRAIKEMNVRGAPAIAIVGCLTVAV 61
Query: 63 DIKDKQFPDN-ELIQLIESMLEK------------------------------------- 84
++ K+F + EL + +++ E+
Sbjct: 62 AVQKKEFENTKELAEFVKTSFERLVAARPTAVNMTFASKIINLSILFLNNFHFLNLLSKL 121
Query: 85 ------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
D+ NK IG +GA ++ L + +LTHCNTGSLATA YGTALGVIRSL
Sbjct: 122 ESEMASDVKTNKLIGDHGAAEIVKL--LGDNVTILTHCNTGSLATAGYGTALGVIRSLQR 179
Query: 139 ANKI 142
NK+
Sbjct: 180 ENKL 183
>gi|346473279|gb|AEO36484.1| hypothetical protein [Amblyomma maculatum]
Length = 315
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 89/138 (64%), Gaps = 5/138 (3%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS--PVNTVKTRLIQLIESMLE 213
L V ++LDYL ++RPTAVN+ A + ++ A+ + V ++ + E ML
Sbjct: 33 LAALVRKRLDYLKTSRPTAVNLANMAAHLGRTVDTLAQKNGLSVQAMRDAICGEAEGMLA 92
Query: 214 KDISDNKAIGRNGAQALI---DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
D++ N+AIGR GA+ ++ G KL VLTHCNTGSLATA YGTALGV+R LH +
Sbjct: 93 ADVAANQAIGRYGAEHMVANCRTAAGDGKLGVLTHCNTGSLATAGYGTALGVVRRLHESG 152
Query: 271 KIGAAYCTETRPYNQGAR 288
++ A+CTETRPYNQG+R
Sbjct: 153 QLARAFCTETRPYNQGSR 170
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 73/155 (47%), Gaps = 57/155 (36%)
Query: 44 MQVRGAPAIAIVGCLGLVVDIKDKQFPDN--ELIQLI----------------------- 78
M+VRGAPAIA+V LGL ++ + P + EL L+
Sbjct: 1 MKVRGAPAIAMVAALGLAAELCRTELPSSRAELAALVRKRLDYLKTSRPTAVNLANMAAH 60
Query: 79 ---------------------------ESMLEKDISDNKAIGRNGAQALIDLNPRVS--- 108
E ML D++ N+AIGR GA+ ++ N R +
Sbjct: 61 LGRTVDTLAQKNGLSVQAMRDAICGEAEGMLAADVAANQAIGRYGAEHMVA-NCRTAAGD 119
Query: 109 -KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
KL VLTHCNTGSLATA YGTALGV+R LH + ++
Sbjct: 120 GKLGVLTHCNTGSLATAGYGTALGVVRRLHESGQL 154
>gi|19113402|ref|NP_596610.1| methylthioribose-1-phosphate isomerase (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582365|sp|O60185.1|MTNA_SCHPO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|3116128|emb|CAA18878.1| methylthioribose-1-phosphate isomerase (predicted)
[Schizosaccharomyces pombe]
Length = 359
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 85/141 (60%), Gaps = 5/141 (3%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
K ++ ++YV ++L +RPTAVN+ A ++ + K + ++IQ
Sbjct: 64 KHLSEDADAKEYVINSFEHLKQSRPTAVNLFETAKFMQGIALQEGK-----NCRNKIIQE 118
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E ML KD+ DN IG G + L+ KL VLTHCNTGSLAT+ YGTALG+IRSLH
Sbjct: 119 AERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLH 178
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ + AYCTETRPYNQG+R
Sbjct: 179 ESGNLEHAYCTETRPYNQGSR 199
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 97/177 (54%), Gaps = 42/177 (23%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+IIY + L +LDQLLLP+ K + ++NVEDA+ IK MQVRGAPAIAIV L + V
Sbjct: 2 SLQAIIYNEDKLLVLDQLLLPYERKYISVSNVEDAFAVIKKMQVRGAPAIAIVAALSVAV 61
Query: 63 DIKD-------KQF------------PD-----------------------NELIQLIES 80
+K K++ P N++IQ E
Sbjct: 62 GLKHLSEDADAKEYVINSFEHLKQSRPTAVNLFETAKFMQGIALQEGKNCRNKIIQEAER 121
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
ML KD+ DN IG G + L+ KL VLTHCNTGSLAT+ YGTALG+IRSLH
Sbjct: 122 MLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLH 178
>gi|298709506|emb|CBJ48521.1| eukaryotic translation initiation factor 2B family protein / eIF-2B
family protein [Ectocarpus siliculosus]
Length = 759
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTVKTRLIQLIESMLEKDISDN 219
EKLDYL ++R TAVN+ A D++K+++S A + S ++ + E+MLE+DI+ N
Sbjct: 84 EKLDYLKTSRETAVNLANACDALKTTISGEAAREGSTWSSTVEAFVGAAEAMLEEDIAAN 143
Query: 220 KAIGRNGAQALIDLNP---GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ G +AL+ P G ++L+VLTHCNTGSLATA +GTALGVIR+L + + Y
Sbjct: 144 RRQGGYAVEALLS-EPSCKGKARLSVLTHCNTGSLATAGFGTALGVIRALDEKGLLASCY 202
Query: 277 CTETRPYNQGAR 288
CTETRPYNQGAR
Sbjct: 203 CTETRPYNQGAR 214
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
I Y + SL++L+QL LPH ++ +D+ EDA+ AIK+M VRGAP IAIV LGL V+
Sbjct: 8 IRYTRGSLQVLNQLKLPHETEYMDVRGAEDAFDAIKTMMVRGAPLIAIVAALGLAVE 64
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV---SKLNVLTHCNTGSLATAEYGTAL 130
+ E+MLE+DI+ N+ G +AL+ P ++L+VLTHCNTGSLATA +GTAL
Sbjct: 128 FVGAAEAMLEEDIAANRRQGGYAVEALLS-EPSCKGKARLSVLTHCNTGSLATAGFGTAL 186
Query: 131 GVIRSL 136
GVIR+L
Sbjct: 187 GVIRAL 192
>gi|412986718|emb|CCO15144.1| translation initiation factor, aIF-2BI family [Bathycoccus
prasinos]
Length = 879
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/156 (42%), Positives = 90/156 (57%), Gaps = 10/156 (6%)
Query: 143 VDIKDKQFPDNDS-LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-- 199
V+++ F D D+ L ++V K +YL+ +RPTAVN+ S+ E N+
Sbjct: 77 VELEQTSFADGDAALFQFVKTKAEYLLKSRPTAVNLGNMVKSLIKYCEEIEHEELNNSGD 136
Query: 200 -------VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLA 252
+ +++ E MLE DI NKAIG GA+AL+ KL VLT CNTGSLA
Sbjct: 137 ENGEKGNKREMIVRWCEDMLETDIRHNKAIGEIGAKALLKACCNKKKLKVLTCCNTGSLA 196
Query: 253 TAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA YGTALGV+R+LH ++ Y ETRPYNQG+R
Sbjct: 197 TAGYGTALGVVRTLHEQGRLEMCYAVETRPYNQGSR 232
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 48/69 (69%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+++ E MLE DI NKAIG GA+AL+ KL VLT CNTGSLATA YGTALGV+
Sbjct: 148 IVRWCEDMLETDIRHNKAIGEIGAKALLKACCNKKKLKVLTCCNTGSLATAGYGTALGVV 207
Query: 134 RSLHGANKI 142
R+LH ++
Sbjct: 208 RTLHEQGRL 216
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L+SI Y + SL +LDQ+ LP ++ + + N ++ IK+M VRGAPAIAI L + V+
Sbjct: 19 LESIKYTRGSLFVLDQIQLPSKTEHLPVENCSKCFELIKNMNVRGAPAIAITAALSIAVE 78
Query: 64 IKDKQFPDNE--LIQLIESMLE 83
++ F D + L Q +++ E
Sbjct: 79 LEQTSFADGDAALFQFVKTKAE 100
>gi|46121349|ref|XP_385229.1| hypothetical protein FG05053.1 [Gibberella zeae PH-1]
Length = 391
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 89/132 (67%), Gaps = 4/132 (3%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E LDYL +RPTAV++ A + +K+++ E ++ + V + I+ E + EKD+ N
Sbjct: 84 IDEALDYLKESRPTAVDLTNAINQLKATIREVGSSATKDQVISAFIEEAEKIFEKDLQTN 143
Query: 220 KAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+IG +GA+ L G S K++VLTHCNTGSLAT+ +GTALG+IR+L + + A+
Sbjct: 144 LSIGDHGAEWLRS-QAGASPDQKISVLTHCNTGSLATSGHGTALGIIRTLQSKDLLQHAF 202
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 203 CTETRPYNQGSR 214
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 55/191 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH D++N +A+ +I +M+VRGAPAIAIV LGL
Sbjct: 4 MSTLQAVKYTRGQLQVLDQLRLPHEFHYDDVSNRTEAFDSIATMRVRGAPAIAIVAALGL 63
Query: 61 VVDIKDKQFP-----------DNELIQLIES----------------------------- 80
V++++ D L L ES
Sbjct: 64 AVELQNGSITASDAEGTISQIDEALDYLKESRPTAVDLTNAINQLKATIREVGSSATKDQ 123
Query: 81 -----------MLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEY 126
+ EKD+ N +IG +GA+ L +P K++VLTHCNTGSLAT+ +
Sbjct: 124 VISAFIEEAEKIFEKDLQTNLSIGDHGAEWLRSQAGASPD-QKISVLTHCNTGSLATSGH 182
Query: 127 GTALGVIRSLH 137
GTALG+IR+L
Sbjct: 183 GTALGIIRTLQ 193
>gi|310800670|gb|EFQ35563.1| S-methyl-5-thioribose-1-phosphate isomerase [Glomerella graminicola
M1.001]
Length = 387
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 94/135 (69%), Gaps = 9/135 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI---ESMLEKD 215
Y+ +LDYL +RPTAV++ A + +K+ + +++P + VK+ + I E++L+KD
Sbjct: 80 YIDSRLDYLKESRPTAVDLTNAINQLKTRI----RSAPHDDVKSIIAAYIDEAENILQKD 135
Query: 216 ISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+ N +IG +GAQ L ++ SK++VLTHCNTGSLAT+ +GTALG+IR+L + +
Sbjct: 136 LETNLSIGHHGAQWLKEVAGASSESKISVLTHCNTGSLATSGHGTALGIIRTLWSNSLLR 195
Query: 274 AAYCTETRPYNQGAR 288
AYCTETRPYNQG+R
Sbjct: 196 HAYCTETRPYNQGSR 210
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 52/188 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ Y + L++LDQL LPH ++ E+A+ IKSM+VRGAPAIAIV L
Sbjct: 1 MSGLQAVKYTRGCLEVLDQLRLPHEFHYDKVSTSEEAFDCIKSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD-------------------------------------------KQFPDNELIQL 77
V++ + + P +++ +
Sbjct: 61 AVELHNGSCTASSPQDTISYIDSRLDYLKESRPTAVDLTNAINQLKTRIRSAPHDDVKSI 120
Query: 78 I-------ESMLEKDISDNKAIGRNGAQALIDLN--PRVSKLNVLTHCNTGSLATAEYGT 128
I E++L+KD+ N +IG +GAQ L ++ SK++VLTHCNTGSLAT+ +GT
Sbjct: 121 IAAYIDEAENILQKDLETNLSIGHHGAQWLKEVAGASSESKISVLTHCNTGSLATSGHGT 180
Query: 129 ALGVIRSL 136
ALG+IR+L
Sbjct: 181 ALGIIRTL 188
>gi|380491573|emb|CCF35223.1| S-methyl-5-thioribose-1-phosphate isomerase, partial
[Colletotrichum higginsianum]
Length = 263
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 5/133 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
Y+ +LDYL +RPTAV++ A + +K+ + A ++ I ES+L KD+
Sbjct: 80 YIDSRLDYLKESRPTAVDLTNAINQLKTRI-RGAPQDDAASIIAAYIDEAESILRKDLQT 138
Query: 219 NKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
N +IG +GAQ L D+ +P SK+++LTHCNTGSLAT+ +GTALG+IR+L N + A
Sbjct: 139 NLSIGDHGAQWLKDVAGASPD-SKISILTHCNTGSLATSGHGTALGIIRTLWSGNLLQHA 197
Query: 276 YCTETRPYNQGAR 288
YCTETRPYNQG+R
Sbjct: 198 YCTETRPYNQGSR 210
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 99/193 (51%), Gaps = 54/193 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ Y + L++LDQL LPH +++ E+A+ IKSM+VRGAPAIAIV L
Sbjct: 1 MSGLQAVKYTRGRLEVLDQLRLPHEFHYDEVSTSEEAFDCIKSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD-------------------------------------------KQFPDNELIQL 77
V++ + + P ++ +
Sbjct: 61 AVELHNGSCKASSPQDTVSYIDSRLDYLKESRPTAVDLTNAINQLKTRIRGAPQDDAASI 120
Query: 78 I-------ESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYG 127
I ES+L KD+ N +IG +GAQ L D+ +P SK+++LTHCNTGSLAT+ +G
Sbjct: 121 IAAYIDEAESILRKDLQTNLSIGDHGAQWLKDVAGASPD-SKISILTHCNTGSLATSGHG 179
Query: 128 TALGVIRSLHGAN 140
TALG+IR+L N
Sbjct: 180 TALGIIRTLWSGN 192
>gi|422293503|gb|EKU20803.1| methylthioribose-1-phosphate isomerase [Nannochloropsis gaditana
CCMP526]
Length = 852
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 89/139 (64%), Gaps = 10/139 (7%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSV--------KSSLSEWAKASPVNTVKTRLIQLIES 210
++ E + YL ++RPTAVN+ A D V K + A + + +++ E
Sbjct: 101 WLQEAVVYLKTSRPTAVNLFTAMDEVLLLSQATTKKHDAVGACVQNAAPLVSAVVRFAEQ 160
Query: 211 MLEKDISDNKAIGRNGAQALI-DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
ML++D+ N+AIG +GA A++ +L PG + VLTHCNTGSLATA YGTALGVIRSLH
Sbjct: 161 MLKEDVESNQAIGDHGAAAILANLLPG-QGVKVLTHCNTGSLATAGYGTALGVIRSLHKE 219
Query: 270 NKIGAAYCTETRPYNQGAR 288
++ +CTETRPYNQGAR
Sbjct: 220 GRLARVFCTETRPYNQGAR 238
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+++ E ML++D+ N+AIG +GA A++ +L P + VLTHCNTGSLATA YGTALGV
Sbjct: 154 VVRFAEQMLKEDVESNQAIGDHGAAAILANLLPG-QGVKVLTHCNTGSLATAGYGTALGV 212
Query: 133 IRSLHGANKIVDI 145
IRSLH ++ +
Sbjct: 213 IRSLHKEGRLARV 225
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 3 SLQSIIY-------EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV 55
+LQS+IY E+ SL++LDQLLLP+ + + +DA++ I+ M VRGAP IAIV
Sbjct: 12 ALQSLIYTPRSPQSEQPSLEVLDQLLLPNKKAYIPVKTTQDAWKVIRDMNVRGAPLIAIV 71
Query: 56 GCLGLVVDIKDK 67
L L V++ K
Sbjct: 72 AVLSLAVEMSAK 83
>gi|432106149|gb|ELK32054.1| Coiled-coil domain-containing protein 130 [Myotis davidii]
Length = 644
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 79/129 (61%), Gaps = 2/129 (1%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN-TVKTRLIQLIESMLEKDISDNK 220
E D + P +N AD S E + V+ R+I+ E MLEKD+ DN+
Sbjct: 368 EAADPQDTPHPYTLNSSLVADYSDSETQEAGREGATEEAVRERVIRFAEDMLEKDLKDNR 427
Query: 221 AIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+IG GA L++ P SK+ VLTHCNTG+LATA YGTALGVIRSLH ++ +CTE
Sbjct: 428 SIGDLGAHHLLERAAPTGSKVTVLTHCNTGALATAGYGTALGVIRSLHNLGRLKHVFCTE 487
Query: 280 TRPYNQGAR 288
TRPYNQGAR
Sbjct: 488 TRPYNQGAR 496
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 52/70 (74%), Gaps = 1/70 (1%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+I+ E MLEKD+ DN++IG GA L++ P SK+ VLTHCNTG+LATA YGTALGV
Sbjct: 411 VIRFAEDMLEKDLKDNRSIGDLGAHHLLERAAPTGSKVTVLTHCNTGALATAGYGTALGV 470
Query: 133 IRSLHGANKI 142
IRSLH ++
Sbjct: 471 IRSLHNLGRL 480
>gi|346977971|gb|EGY21423.1| methylthioribose-1-phosphate isomerase [Verticillium dahliae
VdLs.17]
Length = 388
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
Q +D + Y+ +LDYL +RPTAV++ A + +K+ E A +K I+
Sbjct: 70 QATSSDEVISYIHGRLDYLKESRPTAVDLTNAINQLKARTQELAGQDRDAIIKA-YIEEA 128
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSL 266
E +LEKD+ N +IG +GA L D+ K++VLTHCNTGSLAT+ +GTALG+IR+L
Sbjct: 129 EKILEKDLKTNLSIGDHGADWLKDVAQAGPDGKISVLTHCNTGSLATSGHGTALGIIRTL 188
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 189 QSRGWLNHAYCTETRPYNQGSR 210
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 54/189 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + SL++LDQL LPH +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MSTLQAVRYSRGSLEVLDQLRLPHEFHYDNVSTSEEAFDCIRSMRVRGAPAIAIVASLAH 60
Query: 61 VVDIKD---KQFPDNELIQLI--------------------------------------- 78
V++ + + +E+I I
Sbjct: 61 AVELHNGSCQATSSDEVISYIHGRLDYLKESRPTAVDLTNAINQLKARTQELAGQDRDAI 120
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYG 127
E +LEKD+ N +IG +GA L D+ P K++VLTHCNTGSLAT+ +G
Sbjct: 121 IKAYIEEAEKILEKDLKTNLSIGDHGADWLKDVAQAGPD-GKISVLTHCNTGSLATSGHG 179
Query: 128 TALGVIRSL 136
TALG+IR+L
Sbjct: 180 TALGIIRTL 188
>gi|341057652|gb|EGS24083.1| putative translation initiation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 382
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/154 (44%), Positives = 96/154 (62%), Gaps = 12/154 (7%)
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP 196
HGA K ++D Y+ +LDYL +RPTAV++ A +K+++ + +SP
Sbjct: 66 HGACKATTVQDTI--------SYIDGRLDYLKESRPTAVDLFNAIAKLKAAIRV-SPSSP 116
Query: 197 VNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALID-LNPGVS-KLNVLTHCNTGSLATA 254
+ + T I E +L D+S+N +IG +GA L N S K++VLTHCNTGSLAT+
Sbjct: 117 TDIIST-FIATAEEILRLDLSNNTSIGAHGADWLTQQYNLSSSNKISVLTHCNTGSLATS 175
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+GTALG+IR+LH + AYCTETRPYNQG+R
Sbjct: 176 GHGTALGIIRTLHSRQLLYHAYCTETRPYNQGSR 209
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTALG 131
I E +L D+S+N +IG +GA L S K++VLTHCNTGSLAT+ +GTALG
Sbjct: 123 FIATAEEILRLDLSNNTSIGAHGADWLTQQYNLSSSNKISVLTHCNTGSLATSGHGTALG 182
Query: 132 VIRSLH 137
+IR+LH
Sbjct: 183 IIRTLH 188
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
M +L+++ Y + L +LDQL LPH ++N E A+ I++M+VRGAP
Sbjct: 1 MATLEAVKYSRGKLLVLDQLRLPHEHHYDEVNTAEQAFDCIRAMRVRGAP 50
>gi|342879970|gb|EGU81202.1| hypothetical protein FOXB_08352 [Fusarium oxysporum Fo5176]
Length = 388
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E LDYL +RPTAV++ A + +KS++ + V T I+ E + EKD+ N
Sbjct: 81 IEEALDYLKESRPTAVDLTNAINQLKSTIRAVGSTATKEQVITAFIEEAEKIFEKDLQTN 140
Query: 220 KAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+IG +GA+ L G S K++VLTHCNTGSLAT+ +GTALG+IR+L + + A+
Sbjct: 141 LSIGDHGAEWL-RAQAGASPDKKISVLTHCNTGSLATSGHGTALGIIRTLQSKDLLQHAF 199
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 200 CTETRPYNQGSR 211
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 55/191 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M SL+++ Y + L++LDQL LPH D++N +A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSSLKAVKYTRGQLQVLDQLRLPHEFHYDDVSNRTEAFDSIATMRVRGAPAIAIVAALGL 60
Query: 61 VVDIKDKQF----PDNELIQLIESM----------------------------------- 81
V++ + ++ + Q+ E++
Sbjct: 61 AVELHNGSITASNAEDTISQIEEALDYLKESRPTAVDLTNAINQLKSTIRAVGSTATKEQ 120
Query: 82 ------------LEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEY 126
EKD+ N +IG +GA+ L +P K++VLTHCNTGSLAT+ +
Sbjct: 121 VITAFIEEAEKIFEKDLQTNLSIGDHGAEWLRAQAGASPD-KKISVLTHCNTGSLATSGH 179
Query: 127 GTALGVIRSLH 137
GTALG+IR+L
Sbjct: 180 GTALGIIRTLQ 190
>gi|384250534|gb|EIE24013.1| hypothetical protein COCSUDRAFT_65695 [Coccomyxa subellipsoidea
C-169]
Length = 1818
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 96/147 (65%), Gaps = 7/147 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQ 206
QF + + + E+L+YLV++RPTAVN++ AA+ + + + A + +V +I
Sbjct: 29 QFESAQAAYQKITEQLEYLVTSRPTAVNLQIAANRLSAIAKKEASVEGGSGVSVTIAVIS 88
Query: 207 LIESMLEKDISDNKAIGRNGAQALID--LNPGVSK---LNVLTHCNTGSLATAEYGTALG 261
++M + DI+ NK +G+ GA+ ++ + G S + VLTHCNTGSLATA YGTALG
Sbjct: 89 AADAMFKDDITANKTMGKLGAEGILAELASRGGSSGAGVRVLTHCNTGSLATAAYGTALG 148
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
V+R+LH A + A+CTETRPYNQG+R
Sbjct: 149 VVRALHAAGHLQHAFCTETRPYNQGSR 175
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALI-DLNPRV----SKLNVLTHCNTGSLATAEYGT 128
+I ++M + DI+ NK +G+ GA+ ++ +L R + + VLTHCNTGSLATA YGT
Sbjct: 86 VISAADAMFKDDITANKTMGKLGAEGILAELASRGGSSGAGVRVLTHCNTGSLATAAYGT 145
Query: 129 ALGVIRSLHGANKI 142
ALGV+R+LH A +
Sbjct: 146 ALGVVRALHAAGHL 159
>gi|440636322|gb|ELR06241.1| S-methyl-5-thioribose-1-phosphate isomerase [Geomyces destructans
20631-21]
Length = 454
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 95/170 (55%), Gaps = 39/170 (22%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-----------VKTRLIQ 206
KYV ++LDYL+ +RPTAV++ A +K +++ A A T ++ I+
Sbjct: 79 KYVHDRLDYLMGSRPTAVDLSNAIRLLKMTVNAAAIAEADRTSNKTAQPDAAVIRQAYIK 138
Query: 207 LIESMLEKDISDNKAIGRNGAQALI-----------DLN---------PGVS-------- 238
E +LE D+ N AIGR GA+ L D++ PG
Sbjct: 139 AAEKILEDDLQTNLAIGRYGAEYLRRQQLPVLSPENDVDDIRYFTTSPPGTQGAPDRTYR 198
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
KL+VLTHCNTGSLAT+ +GTALG+IRSLH N + AYCTETRPYNQGAR
Sbjct: 199 KLSVLTHCNTGSLATSGHGTALGIIRSLHKMNYLDHAYCTETRPYNQGAR 248
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 50/96 (52%), Gaps = 28/96 (29%)
Query: 75 IQLIESMLEKDISDNKAIGRNGA-----QALIDLNPR----------------------- 106
I+ E +LE D+ N AIGR GA Q L L+P
Sbjct: 137 IKAAEKILEDDLQTNLAIGRYGAEYLRRQQLPVLSPENDVDDIRYFTTSPPGTQGAPDRT 196
Query: 107 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
KL+VLTHCNTGSLAT+ +GTALG+IRSLH N +
Sbjct: 197 YRKLSVLTHCNTGSLATSGHGTALGIIRSLHKMNYL 232
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
M +LQ+I Y + L++LDQL LPH S D++ E A+ IKSM+VRGAP
Sbjct: 1 MSALQAIKYTRGKLEVLDQLRLPHESVYDDVSTCEQAFDCIKSMRVRGAP 50
>gi|255072737|ref|XP_002500043.1| translation initiation factor fusion with methylthioribose kinase
[Micromonas sp. RCC299]
gi|226515305|gb|ACO61301.1| translation initiation factor fusion with methylthioribose kinase
[Micromonas sp. RCC299]
Length = 799
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
+V K+D+L ++RPTAVN+ A + +K L+ S + V+ +I E ML DI++
Sbjct: 82 FVATKMDHLNTSRPTAVNLGEAVERIKK-LAASLDGSGADAVEA-VIAECEGMLAADIAN 139
Query: 219 NKAIGRNGAQALIDL--NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+AIG GA AL P + + VLTHCNTGSLATA +GTALGV+R+L +++ Y
Sbjct: 140 NRAIGSFGADALCAAVGKPAGAPIRVLTHCNTGSLATAGFGTALGVVRALRETDRLEHIY 199
Query: 277 CTETRPYNQGAR 288
C ETRPYNQGAR
Sbjct: 200 CNETRPYNQGAR 211
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDL--NPRVSKLNVLTHCNTGSLATAEYGTALG 131
+I E ML DI++N+AIG GA AL P + + VLTHCNTGSLATA +GTALG
Sbjct: 125 VIAECEGMLAADIANNRAIGSFGADALCAAVGKPAGAPIRVLTHCNTGSLATAGFGTALG 184
Query: 132 VIRSLHGANKIVDI 145
V+R+L +++ I
Sbjct: 185 VVRALRETDRLEHI 198
>gi|302420905|ref|XP_003008283.1| methylthioribose-1-phosphate isomerase [Verticillium albo-atrum
VaMs.102]
gi|313471357|sp|C9SB02.1|MTNA_VERA1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|261353934|gb|EEY16362.1| methylthioribose-1-phosphate isomerase [Verticillium albo-atrum
VaMs.102]
Length = 388
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 3/132 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
Y+ +LDYL +RPTAV++ A + +K+ E A +K I+ E++LEKD+
Sbjct: 80 YIHGRLDYLKESRPTAVDLTNAINQLKARTQELAGQDRDAIIKA-YIEEAENILEKDLKT 138
Query: 219 NKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N +IG +GA L D+ K++VLTHCNTGSLAT+ +GTALG+IR+L + AY
Sbjct: 139 NLSIGDHGADWLKDVAQAGPDGKISVLTHCNTGSLATSGHGTALGIIRTLQSRGWLNHAY 198
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 199 CTETRPYNQGSR 210
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 97/189 (51%), Gaps = 54/189 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + +L++LDQL LPH +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MSTLQAVKYSRGNLEVLDQLRLPHEFHYDNVSTSEEAFDCIRSMRVRGAPAIAIVASLAH 60
Query: 61 VVDIKD---KQFPDNELIQLI--------------------------------------- 78
V++ + + E+I I
Sbjct: 61 AVELHNGSCRATSSEEVISYIHGRLDYLKESRPTAVDLTNAINQLKARTQELAGQDRDAI 120
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYG 127
E++LEKD+ N +IG +GA L D+ P K++VLTHCNTGSLAT+ +G
Sbjct: 121 IKAYIEEAENILEKDLKTNLSIGDHGADWLKDVAQAGPD-GKISVLTHCNTGSLATSGHG 179
Query: 128 TALGVIRSL 136
TALG+IR+L
Sbjct: 180 TALGIIRTL 188
>gi|119604775|gb|EAW84369.1| hypothetical protein MGC3207, isoform CRA_a [Homo sapiens]
Length = 222
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 99/186 (53%), Gaps = 53/186 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQAGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I E MLEKD+ DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGVIRS 135
L V RS
Sbjct: 182 LDVKRS 187
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 74/110 (67%), Gaps = 3/110 (2%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V +KL +LV+ARPTAVNM RAA + + A+ + V+ R+I E MLEKD+
Sbjct: 78 FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
DN++IG GA+ L++ + P K+ VLTHCNTG+LATA YGTAL V RS
Sbjct: 138 RDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALDVKRS 187
>gi|429860784|gb|ELA35505.1| methylthioribose-1-phosphate isomerase [Colletotrichum
gloeosporioides Nara gc5]
Length = 389
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 88/133 (66%), Gaps = 5/133 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
Y+ +LDYL +RPTAV++ A +K+ + + P + T I+ E +LEKD+
Sbjct: 80 YIDSRLDYLKESRPTAVDLTNAILQLKACIRSAPQDDP-KAIITAYIEEAEKILEKDLQT 138
Query: 219 NKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
N AIG++G++ L G S +++VLTHCNTGSLAT+ +GTALG+IR+L N + A
Sbjct: 139 NLAIGKHGSEWL-QKKAGASAEKQISVLTHCNTGSLATSGHGTALGIIRTLFSDNLLQHA 197
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQG+R
Sbjct: 198 FCTETRPYNQGSR 210
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 52/192 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ Y + L++LDQL LPH D++ E+A+ IKSM+VRGAPAIAIV L
Sbjct: 1 MSGLQAVKYTRGRLEVLDQLRLPHEFHYDDVSTSEEAFDCIKSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD-------------------------------------------KQFPDNE---- 73
V++ + + P ++
Sbjct: 61 AVELHNGSCTASSAQDTVSYIDSRLDYLKESRPTAVDLTNAILQLKACIRSAPQDDPKAI 120
Query: 74 ---LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGT 128
I+ E +LEKD+ N AIG++G++ L + +++VLTHCNTGSLAT+ +GT
Sbjct: 121 ITAYIEEAEKILEKDLQTNLAIGKHGSEWLQKKAGASAEKQISVLTHCNTGSLATSGHGT 180
Query: 129 ALGVIRSLHGAN 140
ALG+IR+L N
Sbjct: 181 ALGIIRTLFSDN 192
>gi|408395732|gb|EKJ74908.1| hypothetical protein FPSE_04944 [Fusarium pseudograminearum CS3096]
Length = 335
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E LDYL +RPTAV++ A + +K+++ ++ + + + I+ E + EKD+ N
Sbjct: 81 IDEALDYLKESRPTAVDLTNAINQLKATIRAVGSSATKDQIISAFIEEAERIFEKDLQTN 140
Query: 220 KAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+IG +GA+ L G S K++VLTHCNTGSLAT+ +GTALG+IR+L + + A+
Sbjct: 141 LSIGDHGAEWLRS-QAGASPDQKISVLTHCNTGSLATSGHGTALGIIRTLQSKDLLQHAF 199
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 200 CTETRPYNQGSR 211
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 55/191 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH D++N +A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSTLQAVKYTRGQLQVLDQLRLPHEFHYDDVSNRTEAFDSIATMRVRGAPAIAIVAALGL 60
Query: 61 VVDIKDKQFP-----------DNELIQLIES----------------------------- 80
V++++ D L L ES
Sbjct: 61 AVELQNGSVTASDAEGTISQIDEALDYLKESRPTAVDLTNAINQLKATIRAVGSSATKDQ 120
Query: 81 -----------MLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEY 126
+ EKD+ N +IG +GA+ L +P K++VLTHCNTGSLAT+ +
Sbjct: 121 IISAFIEEAERIFEKDLQTNLSIGDHGAEWLRSQAGASPD-QKISVLTHCNTGSLATSGH 179
Query: 127 GTALGVIRSLH 137
GTALG+IR+L
Sbjct: 180 GTALGIIRTLQ 190
>gi|156057707|ref|XP_001594777.1| hypothetical protein SS1G_04585 [Sclerotinia sclerotiorum 1980]
gi|313471332|sp|A7EGZ3.1|MTNA_SCLS1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|154702370|gb|EDO02109.1| hypothetical protein SS1G_04585 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 445
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 92/166 (55%), Gaps = 35/166 (21%)
Query: 158 KYVGEKLDYLVSARPTAVNM-------KRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+Y+ ++LDYL+ +RPTAV++ KR + S + + ++ V+ I E
Sbjct: 79 QYINKRLDYLLGSRPTAVDLSNAIKLLKRVSQSAAEATNALDDSAACADVRKGYIDAAEK 138
Query: 211 MLEKDISDNKAIGRNGAQALI-----------DLNPG-----------------VSKLNV 242
+LE D++ N AIGR GA+ L D +P KL+V
Sbjct: 139 ILEDDLTTNLAIGRYGAEYLRRQQMPIGGEEDDEDPSKFFTTSPPCTQGAPDRTYRKLSV 198
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTGSLAT+ +GTALG+IRSLH N + AYCTETRPYNQG+R
Sbjct: 199 LTHCNTGSLATSGHGTALGIIRSLHKMNYLDHAYCTETRPYNQGSR 244
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 49/94 (52%), Gaps = 28/94 (29%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALI-----------DLNPR----------------- 106
I E +LE D++ N AIGR GA+ L D +P
Sbjct: 133 IDAAEKILEDDLTTNLAIGRYGAEYLRRQQMPIGGEEDDEDPSKFFTTSPPCTQGAPDRT 192
Query: 107 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
KL+VLTHCNTGSLAT+ +GTALG+IRSLH N
Sbjct: 193 YRKLSVLTHCNTGSLATSGHGTALGIIRSLHKMN 226
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
M L++I Y + L++LDQL LPH +++ E+A+ +IKSM+VRGAP
Sbjct: 1 MAGLEAIKYGRGRLEVLDQLRLPHEFVYDNVSTCEEAFDSIKSMRVRGAP 50
>gi|341884295|gb|EGT40230.1| hypothetical protein CAEBREN_11102 [Caenorhabditis brenneri]
Length = 366
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 98/184 (53%), Gaps = 43/184 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ L S+ ++ SL++LDQLLLPH K + I NV DA+ IKSMQVRGAP IA+VG LGL+
Sbjct: 23 QRLDSLKFDGQSLQVLDQLLLPHEFKYIPIENVSDAFAVIKSMQVRGAPLIAVVGSLGLL 82
Query: 62 VDIK-------------------------DKQFPDNELIQLIESMLEKD----------- 85
++++ D + N L+ ++ES+++ D
Sbjct: 83 LELQKVSELNLDDIRQKIEYLISSRPTAVDLRNSVNGLLPILESVVDTDHIKLEKCRQYL 142
Query: 86 -------ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
N+ + N Q L+ P KL V+T CNTGSLAT +GTALGVIR+LH
Sbjct: 143 LEVYASEKQQNRILVWNAYQELLQAFPTKKKLTVMTICNTGSLATVSWGTALGVIRALHS 202
Query: 139 ANKI 142
+++
Sbjct: 203 EHRL 206
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 82/132 (62%), Gaps = 8/132 (6%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD- 218
+ +K++YL+S+RPTAV+++ + + + L S V+T +L + + +LE S+
Sbjct: 96 IRQKIEYLISSRPTAVDLRNSVNGLLPILE-----SVVDTDHIKLEKCRQYLLEVYASEK 150
Query: 219 --NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+ + N Q L+ P KL V+T CNTGSLAT +GTALGVIR+LH +++ AY
Sbjct: 151 QQNRILVWNAYQELLQAFPTKKKLTVMTICNTGSLATVSWGTALGVIRALHSEHRLNLAY 210
Query: 277 CTETRPYNQGAR 288
ETRPYNQG R
Sbjct: 211 VLETRPYNQGIR 222
>gi|397578527|gb|EJK50909.1| hypothetical protein THAOC_29980 [Thalassiosira oceanica]
Length = 389
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 71/296 (23%)
Query: 4 LQSIIYE-----KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
L+S+I++ + +L +LDQL LPH +K ++ NVEDA+ A
Sbjct: 6 LRSLIFDVLQDGRATLSVLDQLALPHETKYCEVKNVEDAWDA------------------ 47
Query: 59 GLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN- 117
I SM+ + I NP + + + C+
Sbjct: 48 -------------------IRSMVSRAI-----------------NPAILLVGLSLVCSY 71
Query: 118 TGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSL---EKYVGEKLDYLVSARPTA 174
T SL G L I ++ G + DK + ++ ++++ K+DYL ++RPTA
Sbjct: 72 TVSLLQRIRGAPLIAIVAVLGLAVDLTSNDKTISELNAAPDAKQFIHLKMDYLKTSRPTA 131
Query: 175 VNMKRAADSVKSSLSEWAKASPVNT--VKTRLIQLIESMLEKDISDNKAIGRNGAQALID 232
VN+ A L + +P +T + T ++ + MLE+D++DNKAIG +GA L+
Sbjct: 132 VNLFNAI----QELMDIVDKAPDSTGDIVTAIVTHAQFMLERDVADNKAIGNSGADDLLS 187
Query: 233 LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
P + ++T CNTGSLATA +GTALGV R L K+ + ETRPYNQG+R
Sbjct: 188 RFP--EGVRLVTICNTGSLATASWGTALGVARELQSRGKLESIAALETRPYNQGSR 241
>gi|400600447|gb|EJP68121.1| S-methyl-5-thioribose-1-phosphate isomerase [Beauveria bassiana
ARSEF 2860]
Length = 388
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 99/165 (60%), Gaps = 9/165 (5%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLE--KYVGEKLDYLVSARPTAVNMKRAADSVKS 186
A+ ++ SL A V++ + PD + + Y+ LDYL +RPTAV++ A + +K+
Sbjct: 51 AIAIVASLGLA---VELHNGSAPDGSTQDIVSYIDTALDYLKESRPTAVDLTNAINQLKA 107
Query: 187 SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVS---KLNVL 243
+ A+ + V I E++ EKD+ N AIG GA+ L G S +++VL
Sbjct: 108 RIRAAGDAATKDEVVQAFIDEAENIFEKDLKTNLAIGDYGAEWL-RAQVGASSDKQISVL 166
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTGSLAT+ +GTALG+IR+L + A+CTETRPYNQG+R
Sbjct: 167 THCNTGSLATSGHGTALGIIRTLQSKGLLQHAFCTETRPYNQGSR 211
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 53/190 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH ++ E+A+ +I SM+ RGAPAIAIV LGL
Sbjct: 1 MSTLQAVKYTRGQLQVLDQLRLPHEFHYDNVATREEAFDSIASMRTRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFPD-----------------------------------------------NE 73
V++ + PD +E
Sbjct: 61 AVELHNGSAPDGSTQDIVSYIDTALDYLKESRPTAVDLTNAINQLKARIRAAGDAATKDE 120
Query: 74 LIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
++Q E++ EKD+ N AIG GA+ L S +++VLTHCNTGSLAT+ +G
Sbjct: 121 VVQAFIDEAENIFEKDLKTNLAIGDYGAEWLRAQVGASSDKQISVLTHCNTGSLATSGHG 180
Query: 128 TALGVIRSLH 137
TALG+IR+L
Sbjct: 181 TALGIIRTLQ 190
>gi|308806015|ref|XP_003080319.1| methylthioribose kinase (ISS) [Ostreococcus tauri]
gi|116058779|emb|CAL54486.1| methylthioribose kinase (ISS) [Ostreococcus tauri]
Length = 1089
Score = 113 bits (283), Expect = 9e-23, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 87/143 (60%), Gaps = 4/143 (2%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
+F + + + E+ DY+ ++RPTAVN+ A ++ A+ V +I+
Sbjct: 361 RFRASAEVAAFARERFDYMYTSRPTAVNLGEARGRIQKVAMTLAETCDVTETIDGVIEAC 420
Query: 209 ESMLEKDISDNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
E+MLE+D+ + IGR GA+AL + G K+ V+T CNTGSLATA YGTALGVIR+
Sbjct: 421 EAMLEEDVRSCREIGRRGAEALLASVGAKDG-EKIKVMTCCNTGSLATAGYGTALGVIRA 479
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
L ++ AYC ETRPYNQG+R
Sbjct: 480 LWERGRLERAYCLETRPYNQGSR 502
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDL--NPRVSKLNVLTHCNTGSLATAEYGTALG 131
+I+ E+MLE+D+ + IGR GA+AL+ K+ V+T CNTGSLATA YGTALG
Sbjct: 416 VIEACEAMLEEDVRSCREIGRRGAEALLASVGAKDGEKIKVMTCCNTGSLATAGYGTALG 475
Query: 132 VIRSL 136
VIR+L
Sbjct: 476 VIRAL 480
Score = 45.8 bits (107), Expect = 0.019, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
M +L++I Y + SL++LDQL LP + VD+ E ++ IK M+VRGA
Sbjct: 292 MATLEAIAYVRGSLRVLDQLRLPLETTYVDVPTCEACWRCIKDMRVRGA 340
>gi|340521176|gb|EGR51411.1| hypothetical protein TRIREDRAFT_75304 [Trichoderma reesei QM6a]
Length = 373
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 86/132 (65%), Gaps = 5/132 (3%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E LDYL +RPTAV++ A + +K+++ A+ + + I+ E + EKD+ N
Sbjct: 81 IDEALDYLKESRPTAVDLTNAINQLKATIRT-AEGKGKDAIVQAFIEEAERIFEKDLQSN 139
Query: 220 KAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+IG +GAQ L G S K++VLTHCNTG+LAT+ +GTALG+IR+L + A+
Sbjct: 140 LSIGEHGAQWL-QARAGASPDHKISVLTHCNTGALATSGHGTALGIIRTLQSKGYLKHAF 198
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 199 CTETRPYNQGSR 210
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 54/190 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ Y++ L++LDQLLLPH ++ ++A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSLLQAVKYQRGKLEVLDQLLLPHEFHYDTVSTRQEAFDSIATMRVRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFP---DNELIQLI--------------------------------------- 78
V++ + D E+I I
Sbjct: 61 AVELHNNSIAGTSDGEVIAQIDEALDYLKESRPTAVDLTNAINQLKATIRTAEGKGKDAI 120
Query: 79 --------ESMLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEYG 127
E + EKD+ N +IG +GAQ L +P K++VLTHCNTG+LAT+ +G
Sbjct: 121 VQAFIEEAERIFEKDLQSNLSIGEHGAQWLQARAGASPD-HKISVLTHCNTGALATSGHG 179
Query: 128 TALGVIRSLH 137
TALG+IR+L
Sbjct: 180 TALGIIRTLQ 189
>gi|302893787|ref|XP_003045774.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|313471342|sp|C7Z638.1|MTNA_NECH7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|256726701|gb|EEU40061.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 388
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 89/140 (63%), Gaps = 7/140 (5%)
Query: 155 SLEKYVG---EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
S E+ +G E LDYL +RPTAV++ A + +K+ + E + + + I+ E +
Sbjct: 73 SAEETIGQIEEALDYLKESRPTAVDLTNAINQLKARIREVGSTATKEAIISAFIEEAEKI 132
Query: 212 LEKDISDNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
EKD+ N +IG GA+ L + +P +++VLTHCNTGSLAT+ +GTALG+IR+L
Sbjct: 133 FEKDLKTNLSIGDFGAEWLRAQVGASPE-QQISVLTHCNTGSLATSGHGTALGIIRTLQA 191
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 192 KKLLHHAFCTETRPYNQGSR 211
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 95/191 (49%), Gaps = 55/191 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH +++N +A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSTLQAVKYIRGKLEVLDQLRLPHEFHYDEVSNRTEAFDSIYTMRVRGAPAIAIVAALGL 60
Query: 61 VVDIKDKQFPDN---ELIQLIESML----------------------------------- 82
V++ + + E I IE L
Sbjct: 61 AVELHNGSCTASSAEETIGQIEEALDYLKESRPTAVDLTNAINQLKARIREVGSTATKEA 120
Query: 83 -------------EKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEY 126
EKD+ N +IG GA+ L + +P +++VLTHCNTGSLAT+ +
Sbjct: 121 IISAFIEEAEKIFEKDLKTNLSIGDFGAEWLRAQVGASPE-QQISVLTHCNTGSLATSGH 179
Query: 127 GTALGVIRSLH 137
GTALG+IR+L
Sbjct: 180 GTALGIIRTLQ 190
>gi|154323222|ref|XP_001560925.1| hypothetical protein BC1G_00010 [Botryotinia fuckeliana B05.10]
gi|313471304|sp|A6RHT9.1|MTNA_BOTFB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|347830296|emb|CCD45993.1| hypothetical protein [Botryotinia fuckeliana]
Length = 440
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 91/165 (55%), Gaps = 34/165 (20%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN-------TVKTRLIQLIES 210
+Y+ ++LDYL+ +RPTAV++ A +K A+ + N V+ I E
Sbjct: 79 QYINKRLDYLLGSRPTAVDLSNAIKLLKRVSQAAAETTGTNDDNAACANVRNGYIVAAEK 138
Query: 211 MLEKDISDNKAIGRNGAQAL------------------IDLNPGVS---------KLNVL 243
+LE D++ N AIGR GA+ L +P + KL+VL
Sbjct: 139 ILEDDLTTNLAIGRYGAEYLRRQQMPIGEENNDDPSKFFTTSPPCTQGAMDKTYRKLSVL 198
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTGSLAT+ +GTALG+IRSLH N + AYCTETRPYNQG+R
Sbjct: 199 THCNTGSLATSGHGTALGIIRSLHKMNYLDHAYCTETRPYNQGSR 243
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 27/96 (28%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQAL------------------IDLNPRVS----- 108
N I E +LE D++ N AIGR GA+ L +P +
Sbjct: 130 NGYIVAAEKILEDDLTTNLAIGRYGAEYLRRQQMPIGEENNDDPSKFFTTSPPCTQGAMD 189
Query: 109 ----KLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
KL+VLTHCNTGSLAT+ +GTALG+IRSLH N
Sbjct: 190 KTYRKLSVLTHCNTGSLATSGHGTALGIIRSLHKMN 225
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
M L++I Y + L++LDQL LPH +++ E+A+ +IKSM+VRGAP
Sbjct: 1 MAGLEAIKYGRGRLEVLDQLRLPHEFVYDNVSTCEEAFDSIKSMRVRGAP 50
>gi|17557462|ref|NP_506714.1| Protein C01G10.9 [Caenorhabditis elegans]
gi|3183495|sp|Q93169.1|MTNA_CAEEL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|3873873|emb|CAB02711.1| Protein C01G10.9 [Caenorhabditis elegans]
Length = 366
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 97/184 (52%), Gaps = 43/184 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K L S+ ++ +L++LDQLLLPH K + + V DA+ IKSMQVRGAP IA+VG LGL+
Sbjct: 23 KRLDSLKFDGTNLEVLDQLLLPHEFKYIPVEGVSDAFAVIKSMQVRGAPLIAVVGSLGLL 82
Query: 62 VDIKDKQFPDNE-LIQLIESML---------------------EKDISD----------- 88
++I+ D+E +IQ I ++ +D SD
Sbjct: 83 LEIQKASELDSESIIQKINFLISSRPTAVDLRNSLNGLKPILESQDYSDVVKLEKCRSYL 142
Query: 89 ----------NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
N+ + N Q L+ P KL V+T CNTGSLAT +GTALGVIR+LH
Sbjct: 143 LNVYTDEKLQNRILVWNAYQELLSAFPDKEKLTVMTICNTGSLATISWGTALGVIRALHS 202
Query: 139 ANKI 142
N++
Sbjct: 203 ENRL 206
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 75/127 (59%), Gaps = 2/127 (1%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+K+++L+S+RPTAV+++ + + +K L + V K R L EK N+
Sbjct: 98 QKINFLISSRPTAVDLRNSLNGLKPILESQDYSDVVKLEKCRSYLLNVYTDEK--LQNRI 155
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ N Q L+ P KL V+T CNTGSLAT +GTALGVIR+LH N++ Y ETR
Sbjct: 156 LVWNAYQELLSAFPDKEKLTVMTICNTGSLATISWGTALGVIRALHSENRLKLVYVLETR 215
Query: 282 PYNQGAR 288
PYNQG R
Sbjct: 216 PYNQGIR 222
>gi|303277177|ref|XP_003057882.1| translation initiation factor fusion with methylthioribose kinase
[Micromonas pusilla CCMP1545]
gi|226460539|gb|EEH57833.1| translation initiation factor fusion with methylthioribose kinase
[Micromonas pusilla CCMP1545]
Length = 815
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 90/146 (61%), Gaps = 12/146 (8%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKS-SLSEWAKASPVNTVKTRLIQLIESMLE 213
++ +V +K+D+L ++RPTAVN+ A +K+ + + A V +++ E MLE
Sbjct: 80 AVATFVTQKMDHLCTSRPTAVNLGEAVIRLKALADASVADGLDAAAVVDAVVRACEKMLE 139
Query: 214 KDISDNKAIGRNGAQALIDL------NPGVSK-----LNVLTHCNTGSLATAEYGTALGV 262
D++ N AIG +GA AL +P +K L VLTHCNTGSLATA YGTALGV
Sbjct: 140 DDVAANMAIGAHGADALCAAVASKAADPARAKPVGAALRVLTHCNTGSLATAGYGTALGV 199
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
+R+L G N + YC ETRPYNQGAR
Sbjct: 200 VRALRGRNLLEHVYCNETRPYNQGAR 225
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 91/204 (44%), Gaps = 67/204 (32%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVE--------------------------- 35
+L++I Y + SL++LDQL LP ++ +D+ + +
Sbjct: 5 TLEAIRYARGSLQLLDQLKLPTSTVFIDVPDCDACWSAIKEMNVRGAPAIAIAAALALAV 64
Query: 36 DAYQAIKSMQVRGAPAIAIVG-------C--------LGLVVDIKDKQFPDNEL------ 74
+A++ ++ GA A+A C LG V I+ K D +
Sbjct: 65 EAHKTRDALVASGAAAVATFVTQKMDHLCTSRPTAVNLGEAV-IRLKALADASVADGLDA 123
Query: 75 -------IQLIESMLEKDISDNKAIGRNGAQALI-----------DLNPRVSKLNVLTHC 116
++ E MLE D++ N AIG +GA AL P + L VLTHC
Sbjct: 124 AAVVDAVVRACEKMLEDDVAANMAIGAHGADALCAAVASKAADPARAKPVGAALRVLTHC 183
Query: 117 NTGSLATAEYGTALGVIRSLHGAN 140
NTGSLATA YGTALGV+R+L G N
Sbjct: 184 NTGSLATAGYGTALGVVRALRGRN 207
>gi|406866134|gb|EKD19174.1| S-methyl-5-thioribose-1-phosphate isomerase [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 457
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 97/177 (54%), Gaps = 42/177 (23%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--------------KASPVNT 199
+ L +++ +LDYL+ +RPTAV++ A +KS + + + ++
Sbjct: 79 EDLVRFIEARLDYLMGSRPTAVDLSNAITLLKSRTTSASSICCSSSSSSSSSSPVTAISE 138
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQAL----------IDLN----------PGVS- 238
++T I+ E +LE D++ N+ IGR GA+ L +D PG
Sbjct: 139 IRTAYIEAAEKILEDDLATNRKIGRYGAEYLRRQQEPVVTPVDGTDELRYYTTSPPGTQG 198
Query: 239 -------KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
K++VLTHCNTGSLAT+ +GTALG+IRSLH N + A+CTETRPYNQG+R
Sbjct: 199 ALDCTYRKISVLTHCNTGSLATSGHGTALGIIRSLHSMNYLSHAFCTETRPYNQGSR 255
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 28/96 (29%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQAL----------ID------------------LNPR 106
I+ E +LE D++ N+ IGR GA+ L +D L+
Sbjct: 144 IEAAEKILEDDLATNRKIGRYGAEYLRRQQEPVVTPVDGTDELRYYTTSPPGTQGALDCT 203
Query: 107 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
K++VLTHCNTGSLAT+ +GTALG+IRSLH N +
Sbjct: 204 YRKISVLTHCNTGSLATSGHGTALGIIRSLHSMNYL 239
>gi|308463178|ref|XP_003093865.1| hypothetical protein CRE_18213 [Caenorhabditis remanei]
gi|308248854|gb|EFO92806.1| hypothetical protein CRE_18213 [Caenorhabditis remanei]
Length = 366
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 43/184 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K L S+ ++ +L++LDQLLLPH K + I NV DA+ IKSMQVRGAP IA+VG LGL+
Sbjct: 23 KRLDSLKFDGQNLEVLDQLLLPHEFKYIPILNVSDAFDVIKSMQVRGAPLIAVVGSLGLL 82
Query: 62 VDIKDKQ-------------------------------FP------DNELIQL---IESM 81
++++ FP D++ ++L E +
Sbjct: 83 LELQKMSELNSDEIRKKIEFLISSRPTAVDLRNSLTGIFPILEKEGDSDGVKLEKCREYL 142
Query: 82 LEKDISD---NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
LE S+ N+ + N Q L+ P +KL V+T CNTGSLAT +GTALGVIR+LH
Sbjct: 143 LEVYTSEKLQNRILVWNAYQELLAAFPNKNKLTVMTICNTGSLATVSWGTALGVIRALHS 202
Query: 139 ANKI 142
N++
Sbjct: 203 ENRL 206
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD- 218
+ +K+++L+S+RPTAV+++ + + L + + V K R E +LE S+
Sbjct: 96 IRKKIEFLISSRPTAVDLRNSLTGIFPILEKEGDSDGVKLEKCR-----EYLLEVYTSEK 150
Query: 219 --NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+ + N Q L+ P +KL V+T CNTGSLAT +GTALGVIR+LH N++ AY
Sbjct: 151 LQNRILVWNAYQELLAAFPNKNKLTVMTICNTGSLATVSWGTALGVIRALHSENRLELAY 210
Query: 277 CTETRPYNQGAR 288
ETRPYNQG R
Sbjct: 211 VLETRPYNQGIR 222
>gi|224005651|ref|XP_002291786.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|313471335|sp|B8C6V3.1|MTNA_THAPS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|220972305|gb|EED90637.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 373
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 88/141 (62%), Gaps = 13/141 (9%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR------LIQL 207
D ++ +V K++YL ++RPTAVN+ A D +KS + + + +KTR ++Q
Sbjct: 91 DEVKAFVTTKMEYLKTSRPTAVNLFNAMDELKSFIDD-------DAIKTREEVVSAIVQH 143
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
MLE+D+SDNKAIG +GA L+ + + V+T CNTGSLATA +GTALGV R L
Sbjct: 144 AYLMLERDVSDNKAIGSHGADDLLSRHVHPEGVCVVTICNTGSLATAGWGTALGVARELQ 203
Query: 268 GANKIGAAYCTETRPYNQGAR 288
K+ + ETRPYNQG+R
Sbjct: 204 RRGKLRSIAALETRPYNQGSR 224
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 99/205 (48%), Gaps = 62/205 (30%)
Query: 3 SLQSIIYE------KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG 56
+L+S+I++ K +L +LDQL LP + I NV+DA+ AI+SM++RGAP IA+V
Sbjct: 7 TLRSLIFDVDSATNKATLSVLDQLRLPDETMYTKIVNVQDAWDAIRSMRIRGAPLIAVVA 66
Query: 57 CLGLVVDIKD---------------------------------------------KQFPD 71
LGL VD+ K F D
Sbjct: 67 VLGLAVDLSSNELTIGELDLISGIDEVKAFVTTKMEYLKTSRPTAVNLFNAMDELKSFID 126
Query: 72 NELIQLIES-----------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGS 120
++ I+ E MLE+D+SDNKAIG +GA L+ + + V+T CNTGS
Sbjct: 127 DDAIKTREEVVSAIVQHAYLMLERDVSDNKAIGSHGADDLLSRHVHPEGVCVVTICNTGS 186
Query: 121 LATAEYGTALGVIRSLHGANKIVDI 145
LATA +GTALGV R L K+ I
Sbjct: 187 LATAGWGTALGVARELQRRGKLRSI 211
>gi|320587478|gb|EFW99958.1| translation initiation factor [Grosmannia clavigera kw1407]
Length = 339
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 9/138 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI-----QLIESMLE 213
++ +LDYL +RPTAV++ A ++K+++ E ++ ++ LI + E +LE
Sbjct: 37 HIDSRLDYLKKSRPTAVDLFNAIANLKTAVREVPVSALEDSAAKALIIETYIRTAEHILE 96
Query: 214 KDISDNKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ N AIG GA L G S +++VLTHCNTGSLAT+ +GTALG+IRSLH
Sbjct: 97 KDLKTNLAIGNFGADWL-QQQSGASDDRQISVLTHCNTGSLATSGHGTALGIIRSLHERG 155
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 156 LLQHAYCTETRPYNQGSR 173
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTALGV 132
I+ E +LEKD+ N AIG GA L + +++VLTHCNTGSLAT+ +GTALG+
Sbjct: 88 IRTAEHILEKDLKTNLAIGNFGADWLQQQSGASDDRQISVLTHCNTGSLATSGHGTALGI 147
Query: 133 IRSLH 137
IRSLH
Sbjct: 148 IRSLH 152
>gi|296233084|ref|XP_002761866.1| PREDICTED: methylthioribose-1-phosphate isomerase [Callithrix
jacchus]
Length = 240
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 97/183 (53%), Gaps = 53/183 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+IL+QLLLP + + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLKAIRYSRGSLQILNQLLLPQQTHYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 D----------------IKDK------------------------------------QFP 70
+ ++DK +
Sbjct: 62 ELQTGAGGPGLAALVAFVRDKLSFLVTARPTAVNMARAARDMADAAAREAEREGATEEAV 121
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSLATAEYGTA 129
+I+ E MLEKD+ DN++IG GA L+D + P K+ VLTHCNTG+LATA YGTA
Sbjct: 122 RERVIRCAEDMLEKDLRDNESIGDFGALFLLDQVAPNGGKVTVLTHCNTGALATAGYGTA 181
Query: 130 LGV 132
LG+
Sbjct: 182 LGI 184
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLI 208
P +L +V +KL +LV+ARPTAVNM RAA + + + A+ V+ R+I+
Sbjct: 70 PGLAALVAFVRDKLSFLVTARPTAVNMARAARDMADAAAREAEREGATEEAVRERVIRCA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
E MLEKD+ DN++IG GA L+D + P K+ VLTHCNTG+LATA YGTALG+
Sbjct: 130 EDMLEKDLRDNESIGDFGALFLLDQVAPNGGKVTVLTHCNTGALATAGYGTALGI 184
>gi|426230488|ref|XP_004009303.1| PREDICTED: LOW QUALITY PROTEIN: methylthioribose-1-phosphate
isomerase [Ovis aries]
Length = 291
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 4/108 (3%)
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALID-LNPGVSKL 240
++V S W + +K +I E MLEKD+ DN++IG GA L+ P K+
Sbjct: 28 EAVGSVRQAW---EAIRAMKVEVICWAEDMLEKDLRDNRSIGDLGAHHLLKRAAPQGGKV 84
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCNTG+LATA YGTALGVIRSLH ++ A+CTETRPYNQGAR
Sbjct: 85 TVLTHCNTGALATAGYGTALGVIRSLHNLGRLEHAFCTETRPYNQGAR 132
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 84/141 (59%), Gaps = 27/141 (19%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKV---------------- 45
Query: 63 DIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHCNTGSL 121
E+I E MLEKD+ DN++IG GA L+ P+ K+ VLTHCNTG+L
Sbjct: 46 ----------EVICWAEDMLEKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGAL 95
Query: 122 ATAEYGTALGVIRSLHGANKI 142
ATA YGTALGVIRSLH ++
Sbjct: 96 ATAGYGTALGVIRSLHNLGRL 116
>gi|313471333|sp|P0CI29.1|MTNA_SORMK RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
Length = 388
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-----WAKASPVNTVKTRLIQLIESML 212
KY+ +LDYL +RPTAV++ A +K ++ + A + I+ E +L
Sbjct: 79 KYIDGRLDYLYESRPTAVDLGNAVKLLKKTVRDVKTEGLTDAEAKEAIIKAFIEASEEIL 138
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ NK+IG GA+ L + SK+ V+THCNTGSLAT+ +GTALG+IR+L
Sbjct: 139 AKDLKTNKSIGAFGAKWLQEQYKITDDSKITVITHCNTGSLATSGHGTALGIIRTLRDEG 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLRHAYCTETRPYNQGSR 216
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 58/194 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG------------ 48
M +L++I Y + L++LDQL LPH +++ E+A+ IK+M+VRG
Sbjct: 1 MSALEAIKYSRGKLEVLDQLRLPHEHHYDEVSTSEEAFDCIKTMRVRGAPAIAIVAALAA 60
Query: 49 ------------APAIAIVGCLG------------------------LVVDIKDKQFPDN 72
+P AI G V D+K + D
Sbjct: 61 SVELHNGSCTATSPEEAIKYIDGRLDYLYESRPTAVDLGNAVKLLKKTVRDVKTEGLTDA 120
Query: 73 E--------LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV--SKLNVLTHCNTGSLA 122
E I+ E +L KD+ NK+IG GA+ L + SK+ V+THCNTGSLA
Sbjct: 121 EAKEAIIKAFIEASEEILAKDLKTNKSIGAFGAKWLQEQYKITDDSKITVITHCNTGSLA 180
Query: 123 TAEYGTALGVIRSL 136
T+ +GTALG+IR+L
Sbjct: 181 TSGHGTALGIIRTL 194
>gi|145348509|ref|XP_001418690.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|313471328|sp|A4S068.1|MTNA_OSTLU RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|144578920|gb|ABO96983.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 365
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 89/137 (64%), Gaps = 2/137 (1%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
++ E +V E+ D++ ++RPTAVN+ A + +++ +++ V+ + +I+ E+M
Sbjct: 75 EAAEAFVRERFDHMYTSRPTAVNLGEAKNRIQALAKRLSESGDVSGMIEGVIEGCEAMHA 134
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D++ +AIG GA AL+ N V+T CNTGSLATA YGTALGVIR+L + +
Sbjct: 135 EDVASCRAIGDKGAAALLRACGAKDGENIKVMTCCNTGSLATAGYGTALGVIRALWESGR 194
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYC ETRPYNQG+R
Sbjct: 195 LERAYCLETRPYNQGSR 211
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLN--VLTHCNTGSLATAEYGTALG 131
+I+ E+M +D++ +AIG GA AL+ N V+T CNTGSLATA YGTALG
Sbjct: 125 VIEGCEAMHAEDVASCRAIGDKGAAALLRACGAKDGENIKVMTCCNTGSLATAGYGTALG 184
Query: 132 VIRSLHGANKI 142
VIR+L + ++
Sbjct: 185 VIRALWESGRL 195
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
M SL++I Y + +L++LDQL LP +K +D+ + ++ IK M VRGA
Sbjct: 1 MSSLEAIRYARGNLELLDQLALPLETKYIDVRDCNACWRCIKDMNVRGA 49
>gi|268559432|ref|XP_002637707.1| Hypothetical protein CBG11572 [Caenorhabditis briggsae]
gi|313471305|sp|A8XDI8.1|MTNA_CAEBR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
Length = 366
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 94/184 (51%), Gaps = 43/184 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K L S+ ++ L++LDQLLLPH K + +N+V DA+ IKSMQVRGAP IA+VG LGL+
Sbjct: 23 KRLDSLKFDGQRLEVLDQLLLPHEFKYIPVNDVSDAFNVIKSMQVRGAPLIAVVGSLGLL 82
Query: 62 VDIKDKQFPDNELIQ----------------------LIESMLEKDISDNKAIGR----- 94
++ + E I+ LI + + I+D++ + +
Sbjct: 83 LEFNKNSELNIETIREKIEYLITSRPTAVDLRNSVTGLIPILETEGITDDEKLAKCQEYL 142
Query: 95 ----------------NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
N Q L+ P K V+T CNTGSLAT +GTALGVIR+LH
Sbjct: 143 LNVYTAEKLQNRILLWNAYQELLTAFPGKEKFTVMTICNTGSLATVSWGTALGVIRALHS 202
Query: 139 ANKI 142
N++
Sbjct: 203 ENRL 206
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 3/141 (2%)
Query: 149 QFPDNDSLE-KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
+F N L + + EK++YL+++RPTAV+++ + + L K + L
Sbjct: 84 EFNKNSELNIETIREKIEYLITSRPTAVDLRNSVTGLIPILETEGITDDEKLAKCQEYLL 143
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
EK N+ + N Q L+ PG K V+T CNTGSLAT +GTALGVIR+LH
Sbjct: 144 NVYTAEK--LQNRILLWNAYQELLTAFPGKEKFTVMTICNTGSLATVSWGTALGVIRALH 201
Query: 268 GANKIGAAYCTETRPYNQGAR 288
N++ AY ETRPYNQG R
Sbjct: 202 SENRLNLAYVLETRPYNQGIR 222
>gi|85093163|ref|XP_959639.1| hypothetical protein NCU02226 [Neurospora crassa OR74A]
gi|74615618|sp|Q7S4G7.1|MTNA_NEUCR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|28921085|gb|EAA30403.1| hypothetical protein NCU02226 [Neurospora crassa OR74A]
Length = 388
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 7/138 (5%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSL-----SEWAKASPVNTVKTRLIQLIESML 212
KY+ +LDYL +RPTAV++ A +K ++ A + I+ E +L
Sbjct: 79 KYIDSRLDYLYESRPTAVDLGNAVRLLKKTVRGVKTEGLTDAEAKEAIIKAFIEASEEIL 138
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ NK+IG GA+ L + SK+ V+THCNTGSLAT+ +GTALG+IR+L
Sbjct: 139 AKDLKTNKSIGAFGAKWLQEQYKITDDSKITVMTHCNTGSLATSGHGTALGIIRTLRDEG 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLRHAYCTETRPYNQGSR 216
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 58/194 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L++I Y + L++LDQL LPH +++ E+A+ IK+M+VRGAPAIAIV L
Sbjct: 1 MSALEAIKYSRGKLEVLDQLRLPHEHHYDEVSTSEEAFDCIKAMRVRGAPAIAIVAALAA 60
Query: 61 VVDIKDK-----------QFPDNELIQLIES------------MLEKDISDNKAIGRNGA 97
V++ + ++ D+ L L ES +L+K + K G A
Sbjct: 61 SVELHNGSCTATGTEDVIKYIDSRLDYLYESRPTAVDLGNAVRLLKKTVRGVKTEGLTDA 120
Query: 98 Q-------ALIDLNPRV----------------------------SKLNVLTHCNTGSLA 122
+ A I+ + + SK+ V+THCNTGSLA
Sbjct: 121 EAKEAIIKAFIEASEEILAKDLKTNKSIGAFGAKWLQEQYKITDDSKITVMTHCNTGSLA 180
Query: 123 TAEYGTALGVIRSL 136
T+ +GTALG+IR+L
Sbjct: 181 TSGHGTALGIIRTL 194
>gi|322692342|gb|EFY84262.1| methylthioribose-1-phosphate isomerase [Metarhizium acridum CQMa
102]
Length = 365
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 88/135 (65%), Gaps = 10/135 (7%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSL--SEWAKASPVNTVKTRLIQLIESMLEKDI 216
++ E LDYL +RPTAV++ A + +K+ + S KAS + I+ E++ EKD+
Sbjct: 80 HIDEALDYLKQSRPTAVDLTNAINQLKARIRTSGETKASIIQG----FIEEAENIFEKDL 135
Query: 217 SDNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
N AIG GA+ L + P + ++VLTHCNTGSLAT+ +GTALG+IR+L ++
Sbjct: 136 KTNLAIGDYGAEWLKAQVGATPD-NTVSVLTHCNTGSLATSGHGTALGIIRTLQANGQLR 194
Query: 274 AAYCTETRPYNQGAR 288
A+CTETRPYNQG+R
Sbjct: 195 HAFCTETRPYNQGSR 209
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 93/189 (49%), Gaps = 53/189 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH ++ ++A+ +I SM+ RGAPAIAIV LGL
Sbjct: 1 MSTLQAVRYSRGKLEVLDQLRLPHEFHYDQVSTRQEAFDSIASMRTRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFPDNELIQLI------------------------------------------ 78
V++ + + Q+I
Sbjct: 61 AVELFNGPVAADSPQQVIAHIDEALDYLKQSRPTAVDLTNAINQLKARIRTSGETKASII 120
Query: 79 -------ESMLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEYGT 128
E++ EKD+ N AIG GA+ L + P + ++VLTHCNTGSLAT+ +GT
Sbjct: 121 QGFIEEAENIFEKDLKTNLAIGDYGAEWLKAQVGATPD-NTVSVLTHCNTGSLATSGHGT 179
Query: 129 ALGVIRSLH 137
ALG+IR+L
Sbjct: 180 ALGIIRTLQ 188
>gi|313471306|sp|C4YJ78.1|MTNA_CANAW RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238881924|gb|EEQ45562.1| hypothetical protein CAWG_03891 [Candida albicans WO-1]
Length = 416
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 57/195 (29%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++LQ+I +++ ++K ILDQLLLP+++ + INN+EDA++AIK MQVRGAPAIAIVG
Sbjct: 6 RTLQAIKFDRDNIKLEILDQLLLPYSTSYIPINNIEDAFKAIKLMQVRGAPAIAIVGAFS 65
Query: 60 LVVDIKD------------KQFPD-------------------NELIQLIE--------- 79
+VV++ + K D N++ QL++
Sbjct: 66 VVVEVSNYLKQSDSNQKTIKNLNDSLNYLITSRPTAVNLANALNDIKQLLQKYNETDIID 125
Query: 80 ------------SMLEKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATA 124
++ ++D+++NK IG NG + +ID L + K +++T CNTGSLAT+
Sbjct: 126 EKIYQQIYDYAITLYDEDLANNKKIGENGLKYIIDTLTEQNFKGPFSIITICNTGSLATS 185
Query: 125 EYGTALGVIRSLHGA 139
+GTALG+IRS + A
Sbjct: 186 GHGTALGIIRSTYQA 200
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 13/154 (8%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQ 206
KQ N K + + L+YL+++RPTAVN+ A + +K L ++ + ++ + ++
Sbjct: 75 KQSDSNQKTIKNLNDSLNYLITSRPTAVNLANALNDIKQLLQKYNETDIIDEKIYQQIYD 134
Query: 207 LIESMLEKDISDNKAIGRNGAQALID-LNPGVSK--LNVLTHCNTGSLATAEYGTALGVI 263
++ ++D+++NK IG NG + +ID L K +++T CNTGSLAT+ +GTALG+I
Sbjct: 135 YAITLYDEDLANNKKIGENGLKYIIDTLTEQNFKGPFSIITICNTGSLATSGHGTALGII 194
Query: 264 RSLHGANK---------IGAAYCTETRPYNQGAR 288
RS + A + + Y ETRPYNQGA+
Sbjct: 195 RSTYQALQKNNSKQDFWLDHIYPCETRPYNQGAK 228
>gi|336273210|ref|XP_003351360.1| hypothetical protein SMAC_03666 [Sordaria macrospora k-hell]
gi|380092881|emb|CCC09634.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 838
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-----WAKASPVNTVKTRLIQLIESML 212
KY+ +LDYL +RPTAV++ A +K ++ + A + I+ E +L
Sbjct: 79 KYIDGRLDYLYESRPTAVDLGNAVKLLKKTVRDVKTEGLTDAEAKEAIIKAFIEASEEIL 138
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ NK+IG GA+ L + SK+ V+THCNTGSLAT+ +GTALG+IR+L
Sbjct: 139 AKDLKTNKSIGAFGAKWLQEQYKITDDSKITVITHCNTGSLATSGHGTALGIIRTLRDEG 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLRHAYCTETRPYNQGSR 216
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 58/194 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG------------ 48
M +L++I Y + L++LDQL LPH +++ E+A+ IK+M+VRG
Sbjct: 1 MSALEAIKYSRGKLEVLDQLRLPHEHHYDEVSTSEEAFDCIKTMRVRGAPAIAIVAALAA 60
Query: 49 ------------APAIAIVGCLG------------------------LVVDIKDKQFPDN 72
+P AI G V D+K + D
Sbjct: 61 SVELHNGSCTATSPEEAIKYIDGRLDYLYESRPTAVDLGNAVKLLKKTVRDVKTEGLTDA 120
Query: 73 E--------LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV--SKLNVLTHCNTGSLA 122
E I+ E +L KD+ NK+IG GA+ L + SK+ V+THCNTGSLA
Sbjct: 121 EAKEAIIKAFIEASEEILAKDLKTNKSIGAFGAKWLQEQYKITDDSKITVITHCNTGSLA 180
Query: 123 TAEYGTALGVIRSL 136
T+ +GTALG+IR+L
Sbjct: 181 TSGHGTALGIIRTL 194
>gi|68472533|ref|XP_719585.1| potential Initiation factor 2 subunit family protein [Candida
albicans SC5314]
gi|68472784|ref|XP_719457.1| potential Initiation factor 2 subunit family protein [Candida
albicans SC5314]
gi|74586759|sp|Q5AD59.1|MTNA_CANAL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|46441276|gb|EAL00574.1| potential Initiation factor 2 subunit family protein [Candida
albicans SC5314]
gi|46441409|gb|EAL00706.1| potential Initiation factor 2 subunit family protein [Candida
albicans SC5314]
Length = 416
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 110/195 (56%), Gaps = 57/195 (29%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++LQ+I +++ ++K ILDQLLLP+++ + INN+EDA++AIK MQVRGAPAIAIVG
Sbjct: 6 RTLQAIKFDRDNIKLEILDQLLLPYSTSYIPINNIEDAFKAIKLMQVRGAPAIAIVGAFS 65
Query: 60 LVVDIKD------------KQFPD-------------------NELIQLIE--------- 79
+VV++ + K D N++ QL++
Sbjct: 66 VVVEVSNYLKQSDSNQKTIKNLNDSLNYLITSRPTAVNLANALNDIKQLLQKYNETDIID 125
Query: 80 ------------SMLEKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATA 124
++ ++D+++NK IG NG + +ID L + K +++T CNTGSLAT+
Sbjct: 126 EKIYQQIYDYAITLYDEDLANNKKIGENGLKYIIDTLTEQNFKGPFSIITICNTGSLATS 185
Query: 125 EYGTALGVIRSLHGA 139
+GTALG+IRS + A
Sbjct: 186 GHGTALGIIRSTYQA 200
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 13/154 (8%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQ 206
KQ N K + + L+YL+++RPTAVN+ A + +K L ++ + ++ + ++
Sbjct: 75 KQSDSNQKTIKNLNDSLNYLITSRPTAVNLANALNDIKQLLQKYNETDIIDEKIYQQIYD 134
Query: 207 LIESMLEKDISDNKAIGRNGAQALID-LNPGVSK--LNVLTHCNTGSLATAEYGTALGVI 263
++ ++D+++NK IG NG + +ID L K +++T CNTGSLAT+ +GTALG+I
Sbjct: 135 YAITLYDEDLANNKKIGENGLKYIIDTLTEQNFKGPFSIITICNTGSLATSGHGTALGII 194
Query: 264 RSLHGANK---------IGAAYCTETRPYNQGAR 288
RS + A + + Y ETRPYNQGA+
Sbjct: 195 RSTYQALQKNNSKQDFWLDHIYPCETRPYNQGAK 228
>gi|389622105|ref|XP_003708706.1| S-methyl-5-thioribose-1-phosphate isomerase [Magnaporthe oryzae
70-15]
gi|351648235|gb|EHA56094.1| S-methyl-5-thioribose-1-phosphate isomerase [Magnaporthe oryzae
70-15]
gi|440465056|gb|ELQ34398.1| methylthioribose-1-phosphate isomerase [Magnaporthe oryzae Y34]
gi|440481114|gb|ELQ61730.1| methylthioribose-1-phosphate isomerase [Magnaporthe oryzae P131]
Length = 393
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 85/135 (62%), Gaps = 6/135 (4%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE--WAKASPVNTVKTRLIQLIESMLEKDI 216
++ KLDYL +RPTAV++ A +KSS+ + A + +Q E++L KD+
Sbjct: 84 FIDSKLDYLKGSRPTAVDLSNAITLLKSSIRQVDLAATKANENILAAYVQAAENILAKDL 143
Query: 217 SDNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
N +IG GA L +D+ K++VLTHCNTGSLAT+ +GTALG+IRSL +
Sbjct: 144 QTNISIGSFGAAWLESQLDVTSD-HKVSVLTHCNTGSLATSGHGTALGIIRSLQERKTLH 202
Query: 274 AAYCTETRPYNQGAR 288
A+CTETRPYNQG+R
Sbjct: 203 HAFCTETRPYNQGSR 217
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 97/198 (48%), Gaps = 63/198 (31%)
Query: 1 MKSLQSIIYEKHS---LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
M SLQ+I Y + L++LDQL LPH + +I+ E+A+ IKSM+VRGAPAIAIV
Sbjct: 1 MSSLQAIRYSGGTTPKLEVLDQLRLPHENHYDEISTCEEAFDCIKSMRVRGAPAIAIVAA 60
Query: 58 LGLVVDIK-----DKQFPDNELIQLIES-------------------------------- 80
L L V+++ Q P NE I I+S
Sbjct: 61 LALAVELQLANSSTNQTP-NEYIAFIDSKLDYLKGSRPTAVDLSNAITLLKSSIRQVDLA 119
Query: 81 ------------------MLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTG 119
+L KD+ N +IG GA L +D+ K++VLTHCNTG
Sbjct: 120 ATKANENILAAYVQAAENILAKDLQTNISIGSFGAAWLESQLDVTSD-HKVSVLTHCNTG 178
Query: 120 SLATAEYGTALGVIRSLH 137
SLAT+ +GTALG+IRSL
Sbjct: 179 SLATSGHGTALGIIRSLQ 196
>gi|402075699|gb|EJT71122.1| S-methyl-5-thioribose-1-phosphate isomerase [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 395
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 87/138 (63%), Gaps = 9/138 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR-----LIQLIESMLE 213
Y+ +LDYL +RPTAV++ A +KS++ E A+ R I E++LE
Sbjct: 79 YIDSRLDYLKESRPTAVDLSNAIALLKSAIREVDIANLQGPEAKRRILDTYIAAAENILE 138
Query: 214 KDISDNKAIGRNGAQALI---DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ N +IG GA L D +P +++VLTHCNTGSLAT+ +GTALG+IRSL N
Sbjct: 139 KDLQANLSIGGFGASWLQEQHDASPE-RRISVLTHCNTGSLATSGHGTALGIIRSLFTRN 197
Query: 271 KIGAAYCTETRPYNQGAR 288
+ A+CTETRPYNQG+R
Sbjct: 198 LLNHAFCTETRPYNQGSR 215
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 94/197 (47%), Gaps = 60/197 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+I Y L++LDQL LPH ++ E+A+ I+SM+VRGAPAIAIV L + V
Sbjct: 2 SLQAINYTCGRLEVLDQLRLPHEHHYDVVSTSEEAFDCIRSMRVRGAPAIAIVAGLAVAV 61
Query: 63 --------------------------------------------------DIKDKQFPD- 71
DI + Q P+
Sbjct: 62 ELQSGSCTAISPGEAIAYIDSRLDYLKESRPTAVDLSNAIALLKSAIREVDIANLQGPEA 121
Query: 72 -----NELIQLIESMLEKDISDNKAIGRNGAQALI---DLNPRVSKLNVLTHCNTGSLAT 123
+ I E++LEKD+ N +IG GA L D +P +++VLTHCNTGSLAT
Sbjct: 122 KRRILDTYIAAAENILEKDLQANLSIGGFGASWLQEQHDASPE-RRISVLTHCNTGSLAT 180
Query: 124 AEYGTALGVIRSLHGAN 140
+ +GTALG+IRSL N
Sbjct: 181 SGHGTALGIIRSLFTRN 197
>gi|313471387|sp|A5DNT0.2|MTNA_PICGU RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|190348388|gb|EDK40833.2| hypothetical protein PGUG_04931 [Meyerozyma guilliermondii ATCC
6260]
Length = 390
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 58/219 (26%)
Query: 1 MKSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M +L++I +++ +L+ILDQLL+P++++ ++I V+DAY AIKSMQVRGAPAIAIVG
Sbjct: 1 MTTLEAIKFDRTNVTLQILDQLLIPYSTEYLNIEGVDDAYDAIKSMQVRGAPAIAIVGSF 60
Query: 59 GLVVDIKDKQFPD-NEL---IQLIES---------------------------------- 80
+VV+IK++ +EL I +ES
Sbjct: 61 AIVVEIKNRHISSIDELAAKIDYLESSRPTAVNLSNACNEIRALLGNSESLDEVYKRVFD 120
Query: 81 ----MLEKDISDNKAIGRNGAQALID-LNPR--VSKLNVLTHCNTGSLATAEYGTALGVI 133
+ + D+S+N IG NG L++ L + +++T+CNTGSLAT+ +GTALG++
Sbjct: 121 FAVALYDDDLSNNHKIGSNGVDYLVESLRSQNFEGPFSIITYCNTGSLATSGHGTALGIV 180
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARP 172
RS + K +S EK+ E++ Y RP
Sbjct: 181 RSAY----------KALSKENSKEKFWLEQI-YPCETRP 208
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 19/159 (11%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
+V+IK++ D L K+DYL S+RPTAVN+ A + +++ L + ++ V
Sbjct: 63 VVEIKNRHISSIDEL----AAKIDYLESSRPTAVNLSNACNEIRALL---GNSESLDEVY 115
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGT 258
R+ ++ + D+S+N IG NG L++ +++T+CNTGSLAT+ +GT
Sbjct: 116 KRVFDFAVALYDDDLSNNHKIGSNGVDYLVESLRSQNFEGPFSIITYCNTGSLATSGHGT 175
Query: 259 ALGVIRSLHGA---------NKIGAAYCTETRPYNQGAR 288
ALG++RS + A + Y ETRPYNQGA+
Sbjct: 176 ALGIVRSAYKALSKENSKEKFWLEQIYPCETRPYNQGAK 214
>gi|50307533|ref|XP_453746.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606280|sp|Q6CQP3.1|MTNA_KLULA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|49642880|emb|CAH00842.1| KLLA0D15455p [Kluyveromyces lactis]
Length = 407
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 101/199 (50%), Gaps = 60/199 (30%)
Query: 3 SLQSIIYE----KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
SL++I+++ K S+KILDQLLLP+ ++ + IN ++D Y++IKSMQVRGAPAIAIVG L
Sbjct: 2 SLKAIVFDRVLGKCSVKILDQLLLPYQTQYLTINTIDDGYRSIKSMQVRGAPAIAIVGVL 61
Query: 59 GLVVD---------IKDKQFPD-------------------------------------- 71
+++ +K + F D
Sbjct: 62 STLMECQLLLQESFVKTQSFYDLTQLEKILNERLDLLLSSRPTAVNLSNAITDLRKLISN 121
Query: 72 ------NELIQLIESMLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLA 122
N L Q +++ D +DN +G NGA+ L ++ VLT CNTGSLA
Sbjct: 122 DIGKTYNSLFQYACDIIDHDYADNFTMGENGAKHLLAQLEKEAFEGDFGVLTICNTGSLA 181
Query: 123 TAEYGTALGVIRSLHGANK 141
T+ YGTALGVIRSL+ K
Sbjct: 182 TSGYGTALGVIRSLYERTK 200
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 86/165 (52%), Gaps = 26/165 (15%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
+K + F D LEK + E+LD L+S+RPTAVN+ A ++ +S + + L
Sbjct: 76 VKTQSFYDLTQLEKILNERLDLLLSSRPTAVNLSNAITDLRKLIS-----NDIGKTYNSL 130
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALI---DLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
Q +++ D +DN +G NGA+ L+ + VLT CNTGSLAT+ YGTALG
Sbjct: 131 FQYACDIIDHDYADNFTMGENGAKHLLAQLEKEAFEGDFGVLTICNTGSLATSGYGTALG 190
Query: 262 VIRSLHGAN------------------KIGAAYCTETRPYNQGAR 288
VIRSL+ K+ + ETRPYNQG+R
Sbjct: 191 VIRSLYERTKKQISGDEQPKRTKTSNAKMVRVFPLETRPYNQGSR 235
>gi|322712542|gb|EFZ04115.1| methylthioribose-1-phosphate isomerase [Metarhizium anisopliae
ARSEF 23]
Length = 386
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 86/134 (64%), Gaps = 8/134 (5%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSL--SEWAKASPVNTVKTRLIQLIESMLEKDI 216
++ E LDYL +RPTAV++ A + +K+ + S KAS + I+ E++ EKD+
Sbjct: 80 HIDEALDYLKQSRPTAVDLTNAINQLKARIRTSGETKASIIQG----FIEEAENIFEKDL 135
Query: 217 SDNKAIGRNGAQALIDLNPGVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
N AIG GA+ L S ++VLTHCNTGSLAT+ +GTALG+IR+L ++
Sbjct: 136 KTNLAIGDYGAEWLKAQVGATSDNTVSVLTHCNTGSLATSGHGTALGIIRTLQANGQLRH 195
Query: 275 AYCTETRPYNQGAR 288
A+CTETRPYNQG+R
Sbjct: 196 AFCTETRPYNQGSR 209
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 91/188 (48%), Gaps = 51/188 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH ++ ++A+ +I SM+ RGAPAIAIV LGL
Sbjct: 1 MSTLQAVRYSRGKLEVLDQLRLPHEFHYDQVSTRQEAFDSIASMRTRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFPDNELIQLI------------------------------------------ 78
V++ + + Q+I
Sbjct: 61 AVELFNGPVAADSPQQVIAHIDEALDYLKQSRPTAVDLTNAINQLKARIRTSGETKASII 120
Query: 79 -------ESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTA 129
E++ EKD+ N AIG GA+ L S ++VLTHCNTGSLAT+ +GTA
Sbjct: 121 QGFIEEAENIFEKDLKTNLAIGDYGAEWLKAQVGATSDNTVSVLTHCNTGSLATSGHGTA 180
Query: 130 LGVIRSLH 137
LG+IR+L
Sbjct: 181 LGIIRTLQ 188
>gi|146414011|ref|XP_001482976.1| hypothetical protein PGUG_04931 [Meyerozyma guilliermondii ATCC
6260]
Length = 390
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 58/219 (26%)
Query: 1 MKSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M +L++I +++ +L+ILDQLL+P++++ ++I V+DAY AIKSMQVRGAPAIAIVG
Sbjct: 1 MTTLEAIKFDRTNVTLQILDQLLIPYSTEYLNIEGVDDAYDAIKSMQVRGAPAIAIVGSF 60
Query: 59 GLVVDIKDKQFPD-NEL---IQLIES---------------------------------- 80
+VV+IK++ +EL I +ES
Sbjct: 61 AIVVEIKNRHISSIDELAAKIDYLESSRPTAVNLSNACNEIRALLGNSESLDEVYKRVFD 120
Query: 81 ----MLEKDISDNKAIGRNGAQALID-LNPR--VSKLNVLTHCNTGSLATAEYGTALGVI 133
+ + D+S+N IG NG L++ L + +++T+CNTGSLAT+ +GTALG++
Sbjct: 121 FAVALYDDDLSNNHKIGLNGVDYLVESLRSQNFEGPFSIITYCNTGSLATSGHGTALGIV 180
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARP 172
RS + K +S EK+ E++ Y RP
Sbjct: 181 RSAY----------KALSKENSKEKFWLEQI-YPCETRP 208
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 88/159 (55%), Gaps = 19/159 (11%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
+V+IK++ D L K+DYL S+RPTAVN+ A + +++ L + ++ V
Sbjct: 63 VVEIKNRHISSIDEL----AAKIDYLESSRPTAVNLSNACNEIRALL---GNSESLDEVY 115
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGT 258
R+ ++ + D+S+N IG NG L++ +++T+CNTGSLAT+ +GT
Sbjct: 116 KRVFDFAVALYDDDLSNNHKIGLNGVDYLVESLRSQNFEGPFSIITYCNTGSLATSGHGT 175
Query: 259 ALGVIRSLHGA---------NKIGAAYCTETRPYNQGAR 288
ALG++RS + A + Y ETRPYNQGA+
Sbjct: 176 ALGIVRSAYKALSKENSKEKFWLEQIYPCETRPYNQGAK 214
>gi|213407962|ref|XP_002174752.1| methylthioribose-1-phosphate isomerase [Schizosaccharomyces
japonicus yFS275]
gi|313471356|sp|B6K4Q2.1|MTNA_SCHJY RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|212002799|gb|EEB08459.1| methylthioribose-1-phosphate isomerase [Schizosaccharomyces
japonicus yFS275]
Length = 356
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 84/135 (62%), Gaps = 5/135 (3%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D L YV E + L +RPTAVN+ + A ++ + A+A ++ +++ E +L
Sbjct: 69 DDLRNYVIESFERLKQSRPTAVNLFQIAYKMR----KLAEAYEGEEIRVVVVKEAEDLLA 124
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D+ DN IG G++ ++ L +L +LTHCNTGSLAT+ YGTALG+IRSL+ I
Sbjct: 125 RDLRDNHTIGELGSEYVLKL-VNKPRLTILTHCNTGSLATSGYGTALGIIRSLNEKGAIE 183
Query: 274 AAYCTETRPYNQGAR 288
YCTETRP NQG+R
Sbjct: 184 RVYCTETRPNNQGSR 198
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 47/179 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDI------------------------------- 31
SLQ+I+YE + L +LDQLLLPH K + I
Sbjct: 2 SLQAIVYEDNKLSVLDQLLLPHEHKYIPIKSVEDAYSVIKNMQVRGAPAIAIVAALAVAV 61
Query: 32 -----------NNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNELIQLIES 80
N V ++++ +K + I + + + + + +++ E
Sbjct: 62 SLVNVKTDDLRNYVIESFERLKQSRPTAVNLFQIAYKMRKLAEAYEGEEIRVVVVKEAED 121
Query: 81 MLEKDISDNKAIGRNGAQALIDL--NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+L +D+ DN IG G++ ++ L PR L +LTHCNTGSLAT+ YGTALG+IRSL+
Sbjct: 122 LLARDLRDNHTIGELGSEYVLKLVNKPR---LTILTHCNTGSLATSGYGTALGIIRSLN 177
>gi|336467579|gb|EGO55743.1| hypothetical protein NEUTE1DRAFT_67681 [Neurospora tetrasperma FGSC
2508]
gi|350287769|gb|EGZ69005.1| putative translation initiation factor [Neurospora tetrasperma FGSC
2509]
Length = 388
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 7/138 (5%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKS-----SLSEWAKASPVNTVKTRLIQLIESML 212
KY+ +LDYL +RPTAV++ A +K A + I+ E +L
Sbjct: 79 KYIDSRLDYLYESRPTAVDLGNAVRLLKKIVRGVKTEGLTDAEAKEAIIKAFIEASEEIL 138
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV--SKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ NK+IG GA+ L + SK+ V+THCNTGSLAT+ +GTALG+IR+L
Sbjct: 139 AKDLKTNKSIGAFGAKWLQEQYKITDDSKITVMTHCNTGSLATSGHGTALGIIRTLRDEG 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLRHAYCTETRPYNQGSR 216
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 58/194 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L++I Y + L++LDQL LPH +++ E+A+ IK+M+VRGAPAIAIV L
Sbjct: 1 MSALEAIKYSRGKLEVLDQLRLPHEHHYDEVSTSEEAFDCIKAMRVRGAPAIAIVAALAA 60
Query: 61 VVDIKDK-----------QFPDNELIQLIES------------MLEKDISDNKAIGRNGA 97
V++ + ++ D+ L L ES +L+K + K G A
Sbjct: 61 SVELHNGSCTATGTEDVIKYIDSRLDYLYESRPTAVDLGNAVRLLKKIVRGVKTEGLTDA 120
Query: 98 Q-------ALIDLNPRV----------------------------SKLNVLTHCNTGSLA 122
+ A I+ + + SK+ V+THCNTGSLA
Sbjct: 121 EAKEAIIKAFIEASEEILAKDLKTNKSIGAFGAKWLQEQYKITDDSKITVMTHCNTGSLA 180
Query: 123 TAEYGTALGVIRSL 136
T+ +GTALG+IR+L
Sbjct: 181 TSGHGTALGIIRTL 194
>gi|358380477|gb|EHK18155.1| hypothetical protein TRIVIDRAFT_80802 [Trichoderma virens Gv29-8]
Length = 386
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 82/132 (62%), Gaps = 5/132 (3%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E LDYL +RPTAV++ A +K+ + A + I+ E + EKD+ N
Sbjct: 81 IDEALDYLKESRPTAVDLTNAITQLKTIIRT-ADGKGKEAIVQAFIEEAERIFEKDLQSN 139
Query: 220 KAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+IG GAQ L + +P K++VLTHCNTG+LAT+ +GTALG+IR+L + A+
Sbjct: 140 LSIGDFGAQWLQSQVGASPD-QKISVLTHCNTGALATSGHGTALGIIRTLQSKGYLKHAF 198
Query: 277 CTETRPYNQGAR 288
CTETRPYNQG+R
Sbjct: 199 CTETRPYNQGSR 210
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 96/190 (50%), Gaps = 54/190 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ Y++ L++LDQLLLPH ++ ++A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSLLQAVKYQRGKLEVLDQLLLPHEFHYDTVSTRQEAFDSIATMRVRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQF---PDNELIQLI--------------------------------------- 78
V++ + D E+I I
Sbjct: 61 AVELHNNSISASSDGEVIAQIDEALDYLKESRPTAVDLTNAITQLKTIIRTADGKGKEAI 120
Query: 79 --------ESMLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEYG 127
E + EKD+ N +IG GAQ L + +P K++VLTHCNTG+LAT+ +G
Sbjct: 121 VQAFIEEAERIFEKDLQSNLSIGDFGAQWLQSQVGASPD-QKISVLTHCNTGALATSGHG 179
Query: 128 TALGVIRSLH 137
TALG+IR+L
Sbjct: 180 TALGIIRTLQ 189
>gi|367032128|ref|XP_003665347.1| hypothetical protein MYCTH_2135256 [Myceliophthora thermophila ATCC
42464]
gi|347012618|gb|AEO60102.1| hypothetical protein MYCTH_2135256 [Myceliophthora thermophila ATCC
42464]
Length = 389
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 83/140 (59%), Gaps = 13/140 (9%)
Query: 159 YVGEKLDYLVSARPTAVNM-------KRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
Y+ +LDYL +RPTAV++ KRAA + K + + I+ E +
Sbjct: 80 YIESRLDYLKESRPTAVDLSNAITLLKRAARAAK--IEGLGHPEAKEAILNSYIEAAEKI 137
Query: 212 LEKDISDNKAIGRNGA---QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
L KD+ +N +IG GA Q + P L+VLTHCNTGSLAT+ +GTALG+IR+LH
Sbjct: 138 LAKDLENNTSIGSFGAAWLQQQYNATPD-RPLSVLTHCNTGSLATSGHGTALGIIRTLHA 196
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 197 QKLLKHAYCTETRPYNQGSR 216
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 62/198 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M SLQ+I Y + L +LDQL LPH +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MASLQAIKYSRGKLLVLDQLRLPHEHHYDEVSTAEEAFDCIRSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD----KQFPDNELIQLIESMLE--------------------------------- 83
V++ + P++ I IES L+
Sbjct: 61 AVELHNGGCTATTPED-TIAYIESRLDYLKESRPTAVDLSNAITLLKRAARAAKIEGLGH 119
Query: 84 --------------------KDISDNKAIGRNGA---QALIDLNPRVSKLNVLTHCNTGS 120
KD+ +N +IG GA Q + P L+VLTHCNTGS
Sbjct: 120 PEAKEAILNSYIEAAEKILAKDLENNTSIGSFGAAWLQQQYNATPD-RPLSVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSLHG 138
LAT+ +GTALG+IR+LH
Sbjct: 179 LATSGHGTALGIIRTLHA 196
>gi|50545201|ref|XP_500138.1| YALI0A16698p [Yarrowia lipolytica]
gi|74635979|sp|Q6CGS4.1|MTNA_YARLI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|49646003|emb|CAG84070.1| YALI0A16698p [Yarrowia lipolytica CLIB122]
Length = 372
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 103/193 (53%), Gaps = 56/193 (29%)
Query: 3 SLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SL++I Y++ H+L ILDQL LPH S+ V INN +D ++AIK M VRGAPAIAIV L L
Sbjct: 2 SLEAIRYDEKNHTLTILDQLRLPHESEYVPINNSDDGWKAIKDMVVRGAPAIAIVAILSL 61
Query: 61 VVDI-------KDKQFPD-----------------------------NELIQ-------- 76
V++ +D+ + +L+Q
Sbjct: 62 AVELVHGGKVSRDQTRAEVGSFISDRLDYLNTSRPTAVNLSDAVGSFKKLVQTQTGSASE 121
Query: 77 LIES-------MLEKDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEY 126
LIE+ ML D+ DNK IG+ G + + P+ + K++ LT CNTGSLATA Y
Sbjct: 122 LIEAFLSASHKMLLDDVQDNKNIGKYGLEWIQKNVPQAANGHKISALTICNTGSLATAGY 181
Query: 127 GTALGVIRSLHGA 139
GTALG+IR+LH A
Sbjct: 182 GTALGIIRALHEA 194
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ ++LDYL ++RPTAVN+ A S K + + + + + ML D+ D
Sbjct: 83 FISDRLDYLNTSRPTAVNLSDAVGSFKKLVQ--TQTGSASELIEAFLSASHKMLLDDVQD 140
Query: 219 NKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
NK IG+ G + + P + K++ LT CNTGSLATA YGTALG+IR+LH A +
Sbjct: 141 NKNIGKYGLEWIQKNVPQAANGHKISALTICNTGSLATAGYGTALGIIRALHEAGVLERV 200
Query: 276 YCTETRPYNQGAR 288
Y ETRPYNQG+R
Sbjct: 201 YALETRPYNQGSR 213
>gi|116200782|ref|XP_001226203.1| hypothetical protein CHGG_10936 [Chaetomium globosum CBS 148.51]
gi|121775661|sp|Q2GM68.1|MTNA_CHAGB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|88175650|gb|EAQ83118.1| hypothetical protein CHGG_10936 [Chaetomium globosum CBS 148.51]
Length = 389
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 9/138 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVK-----SSLSEWAKASPVNTVKTRLIQLIESMLE 213
Y+ +LDYL +RPTAV++ A +K +++ A + I E++L
Sbjct: 80 YIESRLDYLKDSRPTAVDLSNAIALLKQAARAATVEGLAHPEAKEAILNAYIAAAETILA 139
Query: 214 KDISDNKAIGRNGA---QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ +N +IG +GA Q P L+VLTHCNTGSLAT+ +GTALG+IRSLH
Sbjct: 140 KDLDNNTSIGTHGAAWLQQQYHATPS-RPLSVLTHCNTGSLATSGHGTALGIIRSLHQQQ 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLKHAYCTETRPYNQGSR 216
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 92/197 (46%), Gaps = 62/197 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ+I Y + L +LDQL LPH +++ E A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MATLQAIKYSRGKLLVLDQLRLPHEHHYDEVSTAEQAFDCIRSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD----KQFPDNELIQLIESMLE--------------------------------- 83
V++ + P++ I IES L+
Sbjct: 61 AVELHNGDCTATTPEDT-IAYIESRLDYLKDSRPTAVDLSNAIALLKQAARAATVEGLAH 119
Query: 84 --------------------KDISDNKAIGRNGA---QALIDLNPRVSKLNVLTHCNTGS 120
KD+ +N +IG +GA Q P L+VLTHCNTGS
Sbjct: 120 PEAKEAILNAYIAAAETILAKDLDNNTSIGTHGAAWLQQQYHATPS-RPLSVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSLH 137
LAT+ +GTALG+IRSLH
Sbjct: 179 LATSGHGTALGIIRSLH 195
>gi|340059330|emb|CCC53713.1| putative translation initiation factor 2 subunit [Trypanosoma vivax
Y486]
Length = 384
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 95/160 (59%), Gaps = 6/160 (3%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+ R LHG + V ++ D ++ + D ++++RPTAVN+ + +K+ L
Sbjct: 66 AVAAERKLHGKDDGVPLRTA-----DEALCFILKSCDTVMTSRPTAVNLSKTLTQLKADL 120
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
AKA V ++L E + D++ N+ I R+GA L+ L P +L++LT CNT
Sbjct: 121 VA-AKAGRAEEVVQTCVRLAEEIYAADVAYNEGIMRHGAAHLLALIPLKKRLSILTICNT 179
Query: 249 GSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LAT+ YGTALGV+R L+ ++K+ Y ETRP+NQGAR
Sbjct: 180 GALATSRYGTALGVVRQLYYSDKLERLYACETRPWNQGAR 219
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 56/197 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
++L+SI Y L++LDQ LPH + DI ++ D +AIK M+VRGAPAIA+ G L +
Sbjct: 7 ETLESIKYHNGKLQLLDQRRLPHETVFDDICSIGDICKAIKEMRVRGAPAIAVSGALAIA 66
Query: 62 VDI------KDKQFP--------------------------------------------- 70
V KD P
Sbjct: 67 VAAERKLHGKDDGVPLRTADEALCFILKSCDTVMTSRPTAVNLSKTLTQLKADLVAAKAG 126
Query: 71 -DNELIQ----LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAE 125
E++Q L E + D++ N+ I R+GA L+ L P +L++LT CNTG+LAT+
Sbjct: 127 RAEEVVQTCVRLAEEIYAADVAYNEGIMRHGAAHLLALIPLKKRLSILTICNTGALATSR 186
Query: 126 YGTALGVIRSLHGANKI 142
YGTALGV+R L+ ++K+
Sbjct: 187 YGTALGVVRQLYYSDKL 203
>gi|346326589|gb|EGX96185.1| methylthioribose-1-phosphate isomerase [Cordyceps militaris CM01]
Length = 388
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 82/133 (61%), Gaps = 4/133 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
++ LDYL +RPTAV++ A + +K+ + A+ + I E + EKD+
Sbjct: 80 HIDAALDYLKESRPTAVDLTNAINQLKARIRAGGDAATKAEIVEAFIDEAEKIFEKDLKT 139
Query: 219 NKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
N +IG GA+ L G S +++VLTHCNTGSLAT+ +GTALG+IR+L + A
Sbjct: 140 NLSIGDYGAEWL-RAQAGASSDKQISVLTHCNTGSLATSGHGTALGIIRTLQSKGLLQHA 198
Query: 276 YCTETRPYNQGAR 288
+CTETRPYNQG+R
Sbjct: 199 FCTETRPYNQGSR 211
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 92/190 (48%), Gaps = 53/190 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ++ Y + L++LDQL LPH ++ +A+ +I SM+ RGAPAIAIV LGL
Sbjct: 1 MSALQAVKYSRGKLEVLDQLRLPHEFHYDNVATRLEAFDSIASMRTRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFPD-------------------------------NEL--------------- 74
V++ + P+ N+L
Sbjct: 61 AVELHNGPVPEGSGQDIVAHIDAALDYLKESRPTAVDLTNAINQLKARIRAGGDAATKAE 120
Query: 75 -----IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
I E + EKD+ N +IG GA+ L S +++VLTHCNTGSLAT+ +G
Sbjct: 121 IVEAFIDEAEKIFEKDLKTNLSIGDYGAEWLRAQAGASSDKQISVLTHCNTGSLATSGHG 180
Query: 128 TALGVIRSLH 137
TALG+IR+L
Sbjct: 181 TALGIIRTLQ 190
>gi|171680707|ref|XP_001905298.1| hypothetical protein [Podospora anserina S mat+]
gi|170939981|emb|CAP65207.1| unnamed protein product [Podospora anserina S mat+]
Length = 495
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVK-----SSLSEWAKASPVNTVKTRLIQLIESMLE 213
++ ++LDYL +RPTAV++ A +K ++L A + IQ E +L
Sbjct: 180 HIEKRLDYLKESRPTAVDLSNAITLLKLATRAANLEGLAHPEAKEAILNTYIQTAEEILA 239
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
KD+ +N +IG G L S+ ++VLTHCNTGSLAT+ +GTALG+IR+LH
Sbjct: 240 KDLHNNTSIGSYGTAWLQQQYSASSEKPISVLTHCNTGSLATSGHGTALGIIRTLHSEGL 299
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 300 LKHAYCTETRPYNQGSR 316
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 58/195 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ+I Y + L +LDQL LPH + +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 101 MATLQAIKYSRGKLLVLDQLRLPHENHYDEVSTAEEAFDCIRSMRVRGAPAIAIVAALAH 160
Query: 61 VVDIKD---KQFPDNELIQLIESMLE---------------------------------- 83
V++ + E+I IE L+
Sbjct: 161 AVELHNGDCTATEPEEVIAHIEKRLDYLKESRPTAVDLSNAITLLKLATRAANLEGLAHP 220
Query: 84 -------------------KDISDNKAIGRNGAQALIDLNPRVSK--LNVLTHCNTGSLA 122
KD+ +N +IG G L S+ ++VLTHCNTGSLA
Sbjct: 221 EAKEAILNTYIQTAEEILAKDLHNNTSIGSYGTAWLQQQYSASSEKPISVLTHCNTGSLA 280
Query: 123 TAEYGTALGVIRSLH 137
T+ +GTALG+IR+LH
Sbjct: 281 TSGHGTALGIIRTLH 295
>gi|313471376|sp|B2AML6.2|MTNA_PODAN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
Length = 395
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVK-----SSLSEWAKASPVNTVKTRLIQLIESMLE 213
++ ++LDYL +RPTAV++ A +K ++L A + IQ E +L
Sbjct: 80 HIEKRLDYLKESRPTAVDLSNAITLLKLATRAANLEGLAHPEAKEAILNTYIQTAEEILA 139
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
KD+ +N +IG G L S+ ++VLTHCNTGSLAT+ +GTALG+IR+LH
Sbjct: 140 KDLHNNTSIGSYGTAWLQQQYSASSEKPISVLTHCNTGSLATSGHGTALGIIRTLHSEGL 199
Query: 272 IGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 200 LKHAYCTETRPYNQGSR 216
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 58/195 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ+I Y + L +LDQL LPH + +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MATLQAIKYSRGKLLVLDQLRLPHENHYDEVSTAEEAFDCIRSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD---KQFPDNELIQLIESMLE---------------------------------- 83
V++ + E+I IE L+
Sbjct: 61 AVELHNGDCTATEPEEVIAHIEKRLDYLKESRPTAVDLSNAITLLKLATRAANLEGLAHP 120
Query: 84 -------------------KDISDNKAIGRNGAQALIDLNPRVSK--LNVLTHCNTGSLA 122
KD+ +N +IG G L S+ ++VLTHCNTGSLA
Sbjct: 121 EAKEAILNTYIQTAEEILAKDLHNNTSIGSYGTAWLQQQYSASSEKPISVLTHCNTGSLA 180
Query: 123 TAEYGTALGVIRSLH 137
T+ +GTALG+IR+LH
Sbjct: 181 TSGHGTALGIIRTLH 195
>gi|45184921|ref|NP_982639.1| AAR098Wp [Ashbya gossypii ATCC 10895]
gi|74695728|sp|Q75EI1.1|MTNA_ASHGO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|44980530|gb|AAS50463.1| AAR098Wp [Ashbya gossypii ATCC 10895]
gi|374105838|gb|AEY94749.1| FAAR098Wp [Ashbya gossypii FDAG1]
Length = 403
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 137/312 (43%), Gaps = 99/312 (31%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SLQ+I +++ S+++LDQLLLP+ S+ + I V+D + I+SMQVRGAPAIAIVG
Sbjct: 2 SLQAIQFQRGDKSQVSVRVLDQLLLPYVSRYIPIQTVDDGFAVIRSMQVRGAPAIAIVGV 61
Query: 58 LGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRVSKLNVLTHC 116
L ++V+ Q NE +++ D+S A GR L L R + +N L+H
Sbjct: 62 LSVLVEC---QLLCNEDFVAVQAFY--DLSSYAAFGRTMRMRLAHLLGSRPTAVN-LSH- 114
Query: 117 NTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN 176
+L E R L A + +D+ + Y E LD V+
Sbjct: 115 ---ALRDVE--------RLLDSATSLSQFRDRMY-------DYACELLDMDVA------- 149
Query: 177 MKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALID--LN 234
+N +G NGA+ L+D +
Sbjct: 150 -----------------------------------------NNVRMGDNGARFLLDALIA 168
Query: 235 PGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG--------AAYCT------- 278
G VLT CNTGSLATA YGTALG IRSL + G A+ C
Sbjct: 169 EGFDGSFAVLTICNTGSLATAGYGTALGAIRSLWQHAEAGLTAPKKQKASACAPRMTHVF 228
Query: 279 --ETRPYNQGAR 288
ETRPYNQG+R
Sbjct: 229 PLETRPYNQGSR 240
>gi|393217270|gb|EJD02759.1| eukaryotic translation initiation factor 2B [Fomitiporia
mediterranea MF3/22]
Length = 397
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 91/139 (65%), Gaps = 5/139 (3%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLE 213
+L++ V KLD+L++ARPTAVN+ A ++ LS+ K+ + T+ L++ ++ +
Sbjct: 85 ALQECVEPKLDFLLTARPTAVNLGAAIRRLRRVLSDGVKSGTDARTIAEALVREARAIAD 144
Query: 214 KDISDNKAIGRNGAQALIDLNPG----VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+D+ NK + ++GA+ L+++ S LN+LT CNTGSLAT+ YGTALG+I L
Sbjct: 145 EDLGRNKEMSKHGAEWLVEVRKAKGEDASALNLLTVCNTGSLATSGYGTALGLITHLFET 204
Query: 270 NKIGAAYCTETRPYNQGAR 288
++G AY T+T PY+QG+R
Sbjct: 205 GRLGTAYFTQTAPYHQGSR 223
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SI + ++I++QLLLPH + V IN++++A+ AIK+M++RGAPAIA + L
Sbjct: 9 SIRTNGNEIEIVNQLLLPHVVEYVKINSIKEAHDAIKTMKIRGAPAIASLAVLSF 63
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPR----VSKLNVLTHCNTGSLATAEYGTA 129
L++ ++ ++D+ NK + ++GA+ L+++ S LN+LT CNTGSLAT+ YGTA
Sbjct: 135 LVREARAIADEDLGRNKEMSKHGAEWLVEVRKAKGEDASALNLLTVCNTGSLATSGYGTA 194
Query: 130 LGVIRSLHGANKI 142
LG+I L ++
Sbjct: 195 LGLITHLFETGRL 207
>gi|358401163|gb|EHK50478.1| hypothetical protein TRIATDRAFT_297230 [Trichoderma atroviride IMI
206040]
Length = 386
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 94/163 (57%), Gaps = 12/163 (7%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+LG+ LH N I D + L + E LDYL +RPTAV++ A +K+ +
Sbjct: 57 SLGLAVELHN-NPIAAASDSE------LITRIDEALDYLKESRPTAVDLSNAIAQLKAVI 109
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVS---KLNVLTH 245
+ + I+ E + +KD+ +N +IG G Q L G S +++VLTH
Sbjct: 110 RT-TEGKGQTAITESFIEEAERIFKKDLQNNLSIGDFGTQWL-QSQAGASAEQQISVLTH 167
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTG+LAT+ +GTALG+IR+LH + + A+CTETRPYNQG+R
Sbjct: 168 CNTGALATSGHGTALGIIRTLHYKSFLKHAFCTETRPYNQGSR 210
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 96/189 (50%), Gaps = 52/189 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L+++ Y++ L++LDQL LPH ++ ++A+ +I +M+VRGAPAIAIV LGL
Sbjct: 1 MSALEAVKYQRGKLEVLDQLRLPHEFHYDPVSTRQEAFDSIATMRVRGAPAIAIVASLGL 60
Query: 61 VVDIKDKQFP---DNELIQLI--------------------------------------- 78
V++ + D+ELI I
Sbjct: 61 AVELHNNPIAAASDSELITRIDEALDYLKESRPTAVDLSNAIAQLKAVIRTTEGKGQTAI 120
Query: 79 --------ESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGT 128
E + +KD+ +N +IG G Q L + +++VLTHCNTG+LAT+ +GT
Sbjct: 121 TESFIEEAERIFKKDLQNNLSIGDFGTQWLQSQAGASAEQQISVLTHCNTGALATSGHGT 180
Query: 129 ALGVIRSLH 137
ALG+IR+LH
Sbjct: 181 ALGIIRTLH 189
>gi|363752151|ref|XP_003646292.1| hypothetical protein Ecym_4427 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889927|gb|AET39475.1| hypothetical protein Ecym_4427 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 138/317 (43%), Gaps = 101/317 (31%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I +++ S+K+LDQLLLP+ +K V I ++D + IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIKFDRADKNVVSVKVLDQLLLPYITKYVAIYTIDDGFAVIKSMQVRGAPAIAIVGV 61
Query: 58 LGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN 117
L + L+E L K N+A R +Q D++ S C
Sbjct: 62 LSV----------------LMECQLLK----NEAFVR--SQCFYDMS-SFSGFTKTLMCR 98
Query: 118 TGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
L ++ TA+ + S+ +IVD P+ S ++ DY
Sbjct: 99 LEFLLSSR-PTAVNLSNSIMDMRRIVDD-----PNCGSFVEFFDRLYDYAC--------- 143
Query: 178 KRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALID---LN 234
+++ D+ +NK +G +GA+ L++
Sbjct: 144 --------------------------------KLIDDDLRNNKIMGDHGARYLLESLAQE 171
Query: 235 PGVSK-LNVLTHCNTGSLATAEYGTALGVIRSL----------------------HGANK 271
G + VLT CNTGSLAT+ YGTALGVIRSL + K
Sbjct: 172 EGFEQDFAVLTICNTGSLATSGYGTALGVIRSLWQDSQYKVSSGGKEAKKQKTSANSGAK 231
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQG+R
Sbjct: 232 LVHVYPLETRPYNQGSR 248
>gi|169601586|ref|XP_001794215.1| hypothetical protein SNOG_03661 [Phaeosphaeria nodorum SN15]
gi|160705970|gb|EAT88866.2| hypothetical protein SNOG_03661 [Phaeosphaeria nodorum SN15]
Length = 378
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 82/137 (59%), Gaps = 14/137 (10%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA--KASPVNTVKTRLIQLIESM 211
+ ++ ++ EKL+YLV++RPTAVN+ AA +K E A + + +V+ +Q E M
Sbjct: 73 EEVQVFITEKLEYLVTSRPTAVNLADAAGKLKKITDEAAAREGTSGESVREAYVQAAEQM 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L D+SDNK IG++GA+ ++ + G YGTALGVIRSLH +
Sbjct: 133 LIDDVSDNKNIGKHGAEWIVK------------NSEAGKKGPVRYGTALGVIRSLHASGN 180
Query: 272 IGAAYCTETRPYNQGAR 288
+ A+C+ETRPYNQG+R
Sbjct: 181 LKHAFCSETRPYNQGSR 197
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 82/191 (42%), Gaps = 64/191 (33%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
LQ+I Y + L+ILDQL LPH + I + DA+ AIK M+ RGAPAIAIV L L V+
Sbjct: 3 LQAIKYTRGQLEILDQLKLPHAEEYDHIYSSTDAWHAIKEMRTRGAPAIAIVAALSLAVE 62
Query: 64 IKDKQ----------FPDNELIQLI----------------------------------- 78
+ + + F +L L+
Sbjct: 63 LTNMKLSSIAEEVQVFITEKLEYLVTSRPTAVNLADAAGKLKKITDEAAAREGTSGESVR 122
Query: 79 -------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
E ML D+SDNK IG++GA+ ++ + G YGTALG
Sbjct: 123 EAYVQAAEQMLIDDVSDNKNIGKHGAEWIVK------------NSEAGKKGPVRYGTALG 170
Query: 132 VIRSLHGANKI 142
VIRSLH + +
Sbjct: 171 VIRSLHASGNL 181
>gi|367047655|ref|XP_003654207.1| hypothetical protein THITE_2117012 [Thielavia terrestris NRRL 8126]
gi|347001470|gb|AEO67871.1| hypothetical protein THITE_2117012 [Thielavia terrestris NRRL 8126]
Length = 389
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 9/138 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-----WAKASPVNTVKTRLIQLIESMLE 213
Y+ +LD+L +RPTAV++ A +K + A + I+ E++L
Sbjct: 80 YIESRLDFLKESRPTAVDLSNAIALLKLAARAAKLEGLAHPEAKEAILNSYIEAAENILA 139
Query: 214 KDISDNKAIGRNGA---QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
KD+ +N +IG GA Q D +P +++VLTHCNTGSLAT+ +GTALG+IR+LH
Sbjct: 140 KDLENNTSIGSFGAAWLQQQFDASPD-RRISVLTHCNTGSLATSGHGTALGIIRTLHARG 198
Query: 271 KIGAAYCTETRPYNQGAR 288
+ AYCTETRPYNQG+R
Sbjct: 199 LLRHAYCTETRPYNQGSR 216
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 62/197 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +LQ+I Y + L +LDQL LPH +++ E+A+ I+SM+VRGAPAIAIV L
Sbjct: 1 MATLQAIKYSRGKLLVLDQLRLPHEHHYDEVSTAEEAFDCIRSMRVRGAPAIAIVAALAH 60
Query: 61 VVDIKD----KQFPDNELIQLIESMLE--------------------------------- 83
V++ + P++ I IES L+
Sbjct: 61 AVELHNGSCTATTPED-TIAYIESRLDFLKESRPTAVDLSNAIALLKLAARAAKLEGLAH 119
Query: 84 --------------------KDISDNKAIGRNGA---QALIDLNPRVSKLNVLTHCNTGS 120
KD+ +N +IG GA Q D +P +++VLTHCNTGS
Sbjct: 120 PEAKEAILNSYIEAAENILAKDLENNTSIGSFGAAWLQQQFDASPD-RRISVLTHCNTGS 178
Query: 121 LATAEYGTALGVIRSLH 137
LAT+ +GTALG+IR+LH
Sbjct: 179 LATSGHGTALGIIRTLH 195
>gi|241950725|ref|XP_002418085.1| methylthioribose-1-phosphate isomerase, putative; mtr-1-p
isomerase, putative; s-methyl-5-thioribose-1-phosphate
isomerase, putative [Candida dubliniensis CD36]
gi|313471307|sp|B9WAG5.1|MTNA_CANDC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|223641424|emb|CAX43385.1| methylthioribose-1-phosphate isomerase, putative [Candida
dubliniensis CD36]
Length = 424
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 111/195 (56%), Gaps = 57/195 (29%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++LQ+I ++++++K ILDQLLLP+++ + I ++EDA++AIK MQVRGAPAIAIVG
Sbjct: 6 RTLQAIKFDRNNIKLEILDQLLLPYSTTYIPITSIEDAFKAIKLMQVRGAPAIAIVGAFS 65
Query: 60 LVVDIKD-------------------------------------------KQFPDNELI- 75
+VV++ + ++F D ++I
Sbjct: 66 VVVEVSNYLKQSDSNRKTIENLNDSLDYLITSRPTAVNLANALNDIKQLLQEFNDTDIIN 125
Query: 76 -----QLIE---SMLEKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATA 124
Q+ + ++ ++D+++NK IG NG + +I+ L + K +++T CNTGSLAT+
Sbjct: 126 EKIYQQIYDYAIALYDEDLANNKKIGENGLKYIINTLTEQNFKGPFSIMTICNTGSLATS 185
Query: 125 EYGTALGVIRSLHGA 139
+GTALG+IRS + A
Sbjct: 186 GHGTALGIIRSTYQA 200
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 86/142 (60%), Gaps = 13/142 (9%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQLIESMLEKDISD 218
+ + LDYL+++RPTAVN+ A + +K L E+ +N + ++ ++ ++D+++
Sbjct: 87 LNDSLDYLITSRPTAVNLANALNDIKQLLQEFNDTDIINEKIYQQIYDYAIALYDEDLAN 146
Query: 219 NKAIGRNGAQALID-LNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANK---- 271
NK IG NG + +I+ L K +++T CNTGSLAT+ +GTALG+IRS + A +
Sbjct: 147 NKKIGENGLKYIINTLTEQNFKGPFSIMTICNTGSLATSGHGTALGIIRSTYQALQKNNS 206
Query: 272 -----IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 207 KEEFWLDHIYPCETRPYNQGAK 228
>gi|150864110|ref|XP_001382812.2| hypothetical protein PICST_40776 [Scheffersomyces stipitis CBS
6054]
gi|313471375|sp|A3LN21.2|MTNA_PICST RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|149385366|gb|ABN64783.2| translation initiation factor [Scheffersomyces stipitis CBS 6054]
Length = 409
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 56/192 (29%)
Query: 2 KSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+LQ+I ++K SL+ILDQLLLP+T+ +DI +EDA+ AI+ MQVRGAPAIAIVG
Sbjct: 6 KTLQAIKFDKENISLQILDQLLLPYTTHYLDIKTIEDAFSAIRLMQVRGAPAIAIVGAFA 65
Query: 60 LVVD------------------------------------------IKDKQFPDNELI-- 75
+VVD + +F N+L+
Sbjct: 66 VVVDTNASLKNGGNKTVSKLFDSIDYLETSRPTAVNLANALNDIKKLVSAKFGQNDLVDE 125
Query: 76 ---QLIE----SMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAE 125
Q+I ++ E D+++N IG NG +++ + +++T CNTGSLAT+
Sbjct: 126 DVYQIIYKYSVALYEDDLANNFKIGANGLNYIVETLKKDGFKGAFSIVTICNTGSLATSG 185
Query: 126 YGTALGVIRSLH 137
+GTALG+IRS +
Sbjct: 186 HGTALGIIRSTY 197
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 81/143 (56%), Gaps = 18/143 (12%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE----SMLEKDIS 217
+ +DYL ++RPTAVN+ A + +K +S AK + V + Q+I ++ E D++
Sbjct: 87 DSIDYLETSRPTAVNLANALNDIKKLVS--AKFGQNDLVDEDVYQIIYKYSVALYEDDLA 144
Query: 218 DNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK--- 271
+N IG NG +++ + +++T CNTGSLAT+ +GTALG+IRS + K
Sbjct: 145 NNFKIGANGLNYIVETLKKDGFKGAFSIVTICNTGSLATSGHGTALGIIRSTYDKLKKSE 204
Query: 272 ------IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 205 SSEEFWLDHVYPCETRPYNQGAK 227
>gi|255724120|ref|XP_002546989.1| hypothetical protein CTRG_01295 [Candida tropicalis MYA-3404]
gi|313471370|sp|C5M614.1|MTNA_CANTT RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|240134880|gb|EER34434.1| hypothetical protein CTRG_01295 [Candida tropicalis MYA-3404]
Length = 410
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 105/193 (54%), Gaps = 57/193 (29%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++L++I +++ ++K IL+QLLLP+++ + I+ +EDA+QAIK MQVRGAPAIAIVG
Sbjct: 6 RTLEAIKFDRENIKLDILNQLLLPYSTTYISISTIEDAFQAIKLMQVRGAPAIAIVGAFS 65
Query: 60 LVVDIKDKQFPDN----ELIQLIES----------------------------------- 80
+VVDI + +N ++ +LIES
Sbjct: 66 IVVDIFNYLKLENNTSKKVKELIESLDYLITSRPTAVNLANALNDIKEILKNYNESDIIN 125
Query: 81 -------------MLEKDISDNKAIGRNGAQALIDL--NPRVS-KLNVLTHCNTGSLATA 124
+ ++D+S+NK IG NG +I+ N + +++T CNTGSLAT+
Sbjct: 126 KEIYEKIYNYSIKLYDEDLSNNKKIGENGLNYIINTLKNQKFKGPFSIMTICNTGSLATS 185
Query: 125 EYGTALGVIRSLH 137
+GTALG+IRS +
Sbjct: 186 GHGTALGIIRSTY 198
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 13/140 (9%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN-TVKTRLIQLIESMLEKDISDNK 220
E LDYL+++RPTAVN+ A + +K L + ++ +N + ++ + ++D+S+NK
Sbjct: 89 ESLDYLITSRPTAVNLANALNDIKEILKNYNESDIINKEIYEKIYNYSIKLYDEDLSNNK 148
Query: 221 AIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK------ 271
IG NG +I+ +++T CNTGSLAT+ +GTALG+IRS + + K
Sbjct: 149 KIGENGLNYIINTLKNQKFKGPFSIMTICNTGSLATSGHGTALGIIRSTYESLKKDNSNE 208
Query: 272 ---IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 209 DFYLDHIYPCETRPYNQGAK 228
>gi|344233959|gb|EGV65829.1| putative translation initiation factor [Candida tenuis ATCC 10573]
Length = 403
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 56/194 (28%)
Query: 2 KSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+L++I + K+ SL ILDQLLLP+T+K ++I +EDA+QAIK MQVRGAPAIAIVG
Sbjct: 6 KTLKAIKFNKNDVSLDILDQLLLPYTTKYIEIQTIEDAFQAIKKMQVRGAPAIAIVGAFA 65
Query: 60 LVVD-----------------IKD-------------------------KQFPDNELIQL 77
+ V+ IKD K++ + LI
Sbjct: 66 IAVEVFHYLQDKNSGKTVGDLIKDIDYLVTSRPTAVNLSNACNEIKDSLKKYDSSSLIVK 125
Query: 78 IES---------MLEKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATAE 125
+S + E D+++N IG NG + + LN K +++T CNTGSLAT+
Sbjct: 126 EQSDLILDYAVNLYEDDLANNFKIGDNGVEYIKRVLNAENFKGPFSIMTICNTGSLATSG 185
Query: 126 YGTALGVIRSLHGA 139
+GTALG+IRS + +
Sbjct: 186 HGTALGIIRSAYSS 199
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 83/138 (60%), Gaps = 13/138 (9%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI-QLIESMLEKDISDNKAI 222
+DYLV++RPTAVN+ A + +K SL ++ +S + ++ LI ++ E D+++N I
Sbjct: 90 IDYLVTSRPTAVNLSNACNEIKDSLKKYDSSSLIVKEQSDLILDYAVNLYEDDLANNFKI 149
Query: 223 GRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK-------- 271
G NG + + ++ +++T CNTGSLAT+ +GTALG+IRS + + +
Sbjct: 150 GDNGVEYIKRVLNAENFKGPFSIMTICNTGSLATSGHGTALGIIRSAYSSLQKDVSKEEF 209
Query: 272 -IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 210 FLEHVYPCETRPYNQGAK 227
>gi|302835900|ref|XP_002949511.1| eukaryotic translation initiation factor 2B alpha [Volvox carteri
f. nagariensis]
gi|300265338|gb|EFJ49530.1| eukaryotic translation initiation factor 2B alpha [Volvox carteri
f. nagariensis]
Length = 401
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 94/147 (63%), Gaps = 7/147 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQ 206
+F Y+ LDYLV++RPTAVN+ AA+ +K++ + A A ++V + ++
Sbjct: 79 EFSSVKEATDYINSTLDYLVTSRPTAVNLADAANKLKAAAALAAAADAATPSSVCSAVMD 138
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDL----NPGVS-KLNVLTHCNTGSLATAEYGTALG 261
E+ +DI+ NKA+G GA AL+ GV KL VLTHCNTGSLATA YGTALG
Sbjct: 139 AAEAYFVEDIASNKAMGATGAAALLAAAHARGRGVGGKLRVLTHCNTGSLATAGYGTALG 198
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIR+LH + A+CTETRPYNQGAR
Sbjct: 199 VIRALHEQGTLEHAFCTETRPYNQGAR 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SLQ+I Y + SL++LDQ LLP + +D+ +V+ A+ I+ M VRGAPAI G L + V
Sbjct: 9 SLQAIRYTRGSLQLLDQRLLPFQTAYLDVPDVKAAWTQIRDMVVRGAPAIGCTGALAMAV 68
Query: 63 DIKDKQFPDNELIQLIES 80
+++ + E + E+
Sbjct: 69 ELQTHKGAGTEFSSVKEA 86
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/29 (89%), Positives = 27/29 (93%)
Query: 109 KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
KL VLTHCNTGSLATA YGTALGVIR+LH
Sbjct: 176 KLRVLTHCNTGSLATAGYGTALGVIRALH 204
>gi|254580441|ref|XP_002496206.1| ZYRO0C12936p [Zygosaccharomyces rouxii]
gi|313471360|sp|C5DU12.1|MTNA_ZYGRC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238939097|emb|CAR27273.1| ZYRO0C12936p [Zygosaccharomyces rouxii]
Length = 414
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 66/205 (32%)
Query: 3 SLQSIIYE-----KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I ++ K S+K+LDQLLLP+T+K + ++ ++D Y+ IK+MQVRGAPAIAIVG
Sbjct: 2 SLEAIKFDRSEPRKVSVKVLDQLLLPYTTKYIPVHTIDDGYRVIKNMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK----DKQ-----FPD--------NELIQLIE--------------------- 79
L ++ +++ D Q F D ++L+Q IE
Sbjct: 62 LSILTEVQFLQLDSQKSTQWFYDLSDWSNVNSKLLQRIEFLLSSRPTAVNLSNSLTEIRG 121
Query: 80 --------------------SMLEKDISDNKAIGRNGAQALID---LNPRVSKLNVLTHC 116
++++ D+++N +G NGA+ L++ + + VLT C
Sbjct: 122 ILQNSSDLSDFDSKLFQYVCTLIDDDLANNITMGNNGAEYLLESLVQDGFQGEFGVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSLHGANK 141
NTGSLAT+ YGTALGVIRSL ++
Sbjct: 182 NTGSLATSGYGTALGVIRSLWAKSQ 206
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 86/150 (57%), Gaps = 26/150 (17%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+++++L+S+RPTAVN+ + ++ L +S ++ ++L Q + ++++ D+++N
Sbjct: 97 QRIEFLLSSRPTAVNLSNSLTEIRGILQ---NSSDLSDFDSKLFQYVCTLIDDDLANNIT 153
Query: 222 IGRNGAQALID--LNPGVS-KLNVLTHCNTGSLATAEYGTALGVIRSLH----------- 267
+G NGA+ L++ + G + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 154 MGNNGAEYLLESLVQDGFQGEFGVLTICNTGSLATSGYGTALGVIRSLWAKSQSQGSENP 213
Query: 268 ---------GANKIGAAYCTETRPYNQGAR 288
K+ + ETRPYNQG+R
Sbjct: 214 PSKKQKKDAAPTKMVQVFPLETRPYNQGSR 243
>gi|392593439|gb|EIW82764.1| eukaryotic translation initiation factor 2B [Coniophora puteana
RWD-64-598 SS2]
Length = 391
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 6/141 (4%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP--VNTVKTRLIQLIESM 211
D+L +V + L+YL +ARPTAVN+ A +++ L E +A V + LI + ++
Sbjct: 83 DALVAHVTQILEYLYTARPTAVNLGAATARLRARLRESVEAEKKDVKGIVDDLIAVGRAI 142
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSK----LNVLTHCNTGSLATAEYGTALGVIRSLH 267
++D+ NK + + G LI G LNVLT CNTGSLAT+ YGTALG+I LH
Sbjct: 143 ADEDVGRNKEMAKWGGDWLIKQVKGAGGTGDGLNVLTVCNTGSLATSGYGTALGLITYLH 202
Query: 268 GANKIGAAYCTETRPYNQGAR 288
K+G AY T+T PY+QG+R
Sbjct: 203 EQGKLGKAYFTQTAPYHQGSR 223
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 95/203 (46%), Gaps = 63/203 (31%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L I + L+I++QLLLPHT++ ++I ++EDA+ AIKSM++RGAPAIA L LV
Sbjct: 5 ALVGIKFTDDKLEIVNQLLLPHTTQFIEITSIEDAHDAIKSMKIRGAPAIASCASLALVS 64
Query: 63 D----IKDKQFPD-----NELIQLIESMLE------------------------------ 83
+K PD + L+ + +LE
Sbjct: 65 HLSKALKVSPSPDFLASPDALVAHVTQILEYLYTARPTAVNLGAATARLRARLRESVEAE 124
Query: 84 -KDIS----DNKAIGRNGAQALIDLNPRVSK-------------------LNVLTHCNTG 119
KD+ D A+GR A + N ++K LNVLT CNTG
Sbjct: 125 KKDVKGIVDDLIAVGRAIADEDVGRNKEMAKWGGDWLIKQVKGAGGTGDGLNVLTVCNTG 184
Query: 120 SLATAEYGTALGVIRSLHGANKI 142
SLAT+ YGTALG+I LH K+
Sbjct: 185 SLATSGYGTALGLITYLHEQGKL 207
>gi|294654341|ref|XP_456394.2| DEHA2A01276p [Debaryomyces hansenii CBS767]
gi|313471389|sp|Q6BZH5.2|MTNA_DEBHA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|199428805|emb|CAG84341.2| DEHA2A01276p [Debaryomyces hansenii CBS767]
Length = 406
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 58/194 (29%)
Query: 2 KSLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+LQ+I +++ + L ILDQLL+P+ ++ + I ++EDAYQAIK MQVRGAPAIAIVG
Sbjct: 6 KTLQAIKFDRETKTLDILDQLLIPYATEYISIKSIEDAYQAIKLMQVRGAPAIAIVGAFS 65
Query: 60 LVVDI-------KDK-------------------------------------QFPDNELI 75
+VVD+ K+K +F +EL+
Sbjct: 66 IVVDVYNNLKETKEKSRTIGDLVESIHYLITARPTAVNLSNACLDIEKLILTEFKKDELV 125
Query: 76 ---------QLIESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLAT 123
Q ++ + D+ +N IG NG +++ +++T CNTGSLAT
Sbjct: 126 NQHTFDIVYQYSVALYDDDLDNNFKIGDNGLHYIVETLKSQSFTGPFSIITICNTGSLAT 185
Query: 124 AEYGTALGVIRSLH 137
+ +GTALG+IR++
Sbjct: 186 SGHGTALGIIRTVF 199
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 77/140 (55%), Gaps = 13/140 (9%)
Query: 162 EKLDYLVSARPTAVNMKRAA-DSVKSSLSEWAKASPVNTVKTRLI-QLIESMLEKDISDN 219
E + YL++ARPTAVN+ A D K L+E+ K VN ++ Q ++ + D+ +N
Sbjct: 89 ESIHYLITARPTAVNLSNACLDIEKLILTEFKKDELVNQHTFDIVYQYSVALYDDDLDNN 148
Query: 220 KAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA- 275
IG NG +++ +++T CNTGSLAT+ +GTALG+IR++ A
Sbjct: 149 FKIGDNGLHYIVETLKSQSFTGPFSIITICNTGSLATSGHGTALGIIRTVFKKLSKDAGE 208
Query: 276 -------YCTETRPYNQGAR 288
Y ETRPYNQGAR
Sbjct: 209 KFWLEHVYPCETRPYNQGAR 228
>gi|291278494|ref|YP_003495329.1| translation initiation factor IF-2B [Deferribacter desulfuricans
SSM1]
gi|290753196|dbj|BAI79573.1| translation initiation factor IF-2B [Deferribacter desulfuricans
SSM1]
Length = 329
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 53/208 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ II+E LK+LDQ +LPH + V+ N E+ AIK M VRGAPAI + G+V+
Sbjct: 2 VEPIIWENGVLKLLDQRILPHEKRYVECNTAENVANAIKDMVVRGAPAIGVTAAFGVVLG 61
Query: 64 IKDKQFPDNEL------------------------------IQLIES----MLEKDISDN 89
+K+ + D I +E + E+DI N
Sbjct: 62 LKEGKNIDEIYSLLLNTRPTAVNLKWALDKMKAAYEYAEGNIDFVEESAVKLFERDIEYN 121
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
+ IG++G Q + D + N+LTHCN G+LATA YGTALGV+R+ A
Sbjct: 122 RMIGKSGLQVIKDGD------NILTHCNAGALATAGYGTALGVLRAAKEAGL-------- 167
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNM 177
++ YV E YL AR TA +
Sbjct: 168 -----NIHVYVDETRPYLQGARLTAFEL 190
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 12/131 (9%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
K + E L++ RPTAVN+K A D +K++ E+A+ + ++ V+ ++L E+DI
Sbjct: 66 KNIDEIYSLLLNTRPTAVNLKWALDKMKAAY-EYAEGN-IDFVEESAVKL----FERDIE 119
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
N+ IG++G Q + D + N+LTHCN G+LATA YGTALGV+R+ A Y
Sbjct: 120 YNRMIGKSGLQVIKDGD------NILTHCNAGALATAGYGTALGVLRAAKEAGLNIHVYV 173
Query: 278 TETRPYNQGAR 288
ETRPY QGAR
Sbjct: 174 DETRPYLQGAR 184
>gi|219129798|ref|XP_002185067.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403562|gb|EEC43514.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 817
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 138/297 (46%), Gaps = 81/297 (27%)
Query: 3 SLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SL+S+IY+ SLK+LDQL +P +D+ +++ A+
Sbjct: 8 SLRSLIYDPSGPSLKVLDQLKVPAEKAYIDVTDIQTAWSV-------------------- 47
Query: 61 VVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGS 120
I++ Q LI ++ S+ A+ + +DL+ +S
Sbjct: 48 ---IRNMQIRGAPLIAIVASL-------GLAVDLVSPASTMDLDSMIS------------ 85
Query: 121 LATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
+HG D+ P + Y+ K+DYL ++RPTAVN+ A
Sbjct: 86 ---------------MHG--------DRHGP---VILSYIQGKIDYLETSRPTAVNLFNA 119
Query: 181 ADSVKSSL-----SEWAKASPVNTVKTRLIQLI----ESMLEKDISDNKAIGRNGAQALI 231
++ +L + ++ + R++Q + E MLE+D+ D + IG++GA +
Sbjct: 120 LSELRQALLHAHDETSTTKTSTDSPRERMVQAVMKHAEFMLERDMKDCQRIGQHGADEI- 178
Query: 232 DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L V+K+ +LT CNTG+LA + YGTALGV+R++ ++ + ETRPYNQG+R
Sbjct: 179 -LRDAVNKVTILTICNTGALACSAYGTALGVVRAVRERGQLKSIIALETRPYNQGSR 234
>gi|154346396|ref|XP_001569135.1| putative translation initiation factor 2 subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|313471320|sp|A4HQ10.1|MTNA_LEIBR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|134066477|emb|CAM44270.1| putative translation initiation factor 2 subunit [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 374
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 85/135 (62%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
++ ++ + D+++++RPTAVN+ +K+ + ++ P V ++L E++ +D
Sbjct: 84 VQAFLLKSCDFVMASRPTAVNLFNCLRDLKAQVDKFDSTKPAGEVAKAFVELAEAVYAED 143
Query: 216 ISDNKAIGRNGAQALIDL--NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+ N++I R+GA ++ G K+++LT CNTG+LAT+ YGTALGV+R L +K+
Sbjct: 144 VGLNESIMRHGAAHILAAAKEYGREKVSILTICNTGALATSRYGTALGVVRQLFYDDKLE 203
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 204 KVYACETRPWNQGAR 218
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 55/195 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL +LDQ LP + D+ VED + AIK M+VRGAPAIA+ LG+ V
Sbjct: 8 TLESIKYTSGSLSLLDQSKLPLETVFHDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAV 67
Query: 63 -------------------------------------------DIK------DKQFPDNE 73
D+K D P E
Sbjct: 68 ATQRKVDCGALKSGSEVQAFLLKSCDFVMASRPTAVNLFNCLRDLKAQVDKFDSTKPAGE 127
Query: 74 ----LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV--SKLNVLTHCNTGSLATAEYG 127
++L E++ +D+ N++I R+GA ++ K+++LT CNTG+LAT+ YG
Sbjct: 128 VAKAFVELAEAVYAEDVGLNESIMRHGAAHILAAAKEYGREKVSILTICNTGALATSRYG 187
Query: 128 TALGVIRSLHGANKI 142
TALGV+R L +K+
Sbjct: 188 TALGVVRQLFYDDKL 202
>gi|406601416|emb|CCH46939.1| hypothetical protein BN7_6545 [Wickerhamomyces ciferrii]
Length = 421
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 103/198 (52%), Gaps = 64/198 (32%)
Query: 3 SLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SL++I ++++ SL ILDQLLLP+ ++ + IN + DA+ IK MQVRGAPAIAIVG L +
Sbjct: 2 SLEAIRFDRNARSLNILDQLLLPYATEYIPINTIADAHNVIKKMQVRGAPAIAIVGILSI 61
Query: 61 VVDI--------KDKQFPD--------------------------------NELIQLIES 80
+V++ KD+ F D NE+I+LI+S
Sbjct: 62 LVELDHYVDGKFKDQSFYDLGDFANFQNQLIQRLEYLVTSRPTAVNLSNAVNEVIELIKS 121
Query: 81 -------------------MLEKDISDNKAIGRNGAQALI---DLNPRVSKLNVLTHCNT 118
+++ D ++N +G +G +I + K +VLT CNT
Sbjct: 122 TKAKSIDELYPEIFKYGCDLIDDDYTNNVKLGDHGKDWIIKHLENEGFNGKFSVLTICNT 181
Query: 119 GSLATAEYGTALGVIRSL 136
GSLAT+ YGTALGV+RSL
Sbjct: 182 GSLATSGYGTALGVVRSL 199
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 33/191 (17%)
Query: 130 LGVIRSLHGANKIVD--IKDKQFPDNDSLEKY---VGEKLDYLVSARPTAVNMKRAADSV 184
+G++ L + VD KD+ F D + + ++L+YLV++RPTAVN+ A + V
Sbjct: 56 VGILSILVELDHYVDGKFKDQSFYDLGDFANFQNQLIQRLEYLVTSRPTAVNLSNAVNEV 115
Query: 185 KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL--NPGVS-KLN 241
L + KA ++ + + + +++ D ++N +G +G +I N G + K +
Sbjct: 116 -IELIKSTKAKSIDELYPEIFKYGCDLIDDDYTNNVKLGDHGKDWIIKHLENEGFNGKFS 174
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANK------------------------IGAAYC 277
VLT CNTGSLAT+ YGTALGV+RSL K Y
Sbjct: 175 VLTICNTGSLATSGYGTALGVVRSLWNHAKSFTTSNEESNQEPATKKSKPSGAHFSKVYT 234
Query: 278 TETRPYNQGAR 288
ETRPYNQGAR
Sbjct: 235 LETRPYNQGAR 245
>gi|359688684|ref|ZP_09258685.1| translation initiation factor 2B [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749421|ref|ZP_13305711.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira licerasiae
str. MMD4847]
gi|418755866|ref|ZP_13312056.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|384117191|gb|EIE03446.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira licerasiae
serovar Varillal str. VAR 010]
gi|404274892|gb|EJZ42208.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira licerasiae
str. MMD4847]
Length = 359
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 99/223 (44%), Gaps = 63/223 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
++L+ I +EK LK+LDQ +P + N EDA AIK M VRGAPAIAI G G V
Sbjct: 4 ENLRPIFWEKEGLKLLDQRQIPGKKEWFTAQNSEDAIFAIKEMVVRGAPAIAITGLFGAV 63
Query: 62 VDIKD-KQFPDNELIQLIES---------------------------------------- 80
++ K + PD + Q I S
Sbjct: 64 LEFKKFSKKPDYQEFQTILSKILESRPTAVNLRRAFEELSSIFPKEKYENVSLSELQQKS 123
Query: 81 ------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ E+DI +N + +NG L +P +KL ++THCNTG+LATA +GTALGVIR
Sbjct: 124 EEFAIHVFEEDIRNNLELAKNGV-GLFPSSP--TKLKIITHCNTGALATAGHGTALGVIR 180
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
SL A L Y E YL AR TA +
Sbjct: 181 SLKEA-------------GHDLTVYADETRPYLQGARLTAWEL 210
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM----LEKDISDN 219
L ++ +RPTAVN++RA + + S K N + L Q E E+DI +N
Sbjct: 82 LSKILESRPTAVNLRRAFEELSSIFP---KEKYENVSLSELQQKSEEFAIHVFEEDIRNN 138
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +NG L +P +KL ++THCNTG+LATA +GTALGVIRSL A Y E
Sbjct: 139 LELAKNGV-GLFPSSP--TKLKIITHCNTGALATAGHGTALGVIRSLKEAGHDLTVYADE 195
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 196 TRPYLQGAR 204
>gi|389741858|gb|EIM83046.1| putative translation initiation factor
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Stereum hirsutum FP-91666 SS1]
Length = 392
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 90/142 (63%), Gaps = 11/142 (7%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNM----KRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+L+ ++ LDYL +ARPTAVN+ +R A ++SS+ E A TV L++ E+
Sbjct: 79 ALQSHITPILDYLFTARPTAVNLGAATRRLARKLQSSIDEGKDA---RTVAKELVEEGEA 135
Query: 211 MLEKDISDNKAIGRNGAQALI---DLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSL 266
+ +D+ N+A+ + G + L+ G K LNV+T CNTGSLAT+ YGTALG+I L
Sbjct: 136 VAGEDVGRNRAMAKWGGEWLVGEVKKAGGEGKDLNVMTVCNTGSLATSGYGTALGLITYL 195
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
+ N++G AY T+T PY+QG+R
Sbjct: 196 YETNQLGRAYFTQTAPYHQGSR 217
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 44/55 (80%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
+ SI ++I++QLLLPHT++ ++IN+VE+A++AIKSM++RGAPAIA + L
Sbjct: 1 MTSIRASDGKIEIVNQLLLPHTTEWLEINSVEEAHEAIKSMKIRGAPAIASLAAL 55
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 65 KDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS----KLNVLTHCNTGS 120
KD + EL++ E++ +D+ N+A+ + G + L+ + LNV+T CNTGS
Sbjct: 120 KDARTVAKELVEEGEAVAGEDVGRNRAMAKWGGEWLVGEVKKAGGEGKDLNVMTVCNTGS 179
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALG+I L+ N++
Sbjct: 180 LATSGYGTALGLITYLYETNQL 201
>gi|407401883|gb|EKF29009.1| translation initiation factor 2 subunit, putative [Trypanosoma
cruzi marinkellei]
Length = 373
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
N+I KD D+ +++ E D +++ARPTAVN+ + +K ++E +
Sbjct: 71 NEIKKKKDGVCNSVDNTRRFLLESCDTVMTARPTAVNLSKTLTQLKGDITEVTANTAEEL 130
Query: 200 VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA 259
V+ + L E + +D++ N+ I R+GA ++ L S++++LT CNTG+LAT+ YGTA
Sbjct: 131 VEACTV-LAEKIYAEDVAYNEGIMRHGAAHIMQL-VKTSRVSILTICNTGALATSRYGTA 188
Query: 260 LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LGVIR L K+ Y ETRP+NQGAR
Sbjct: 189 LGVIRQLFYEGKLEQVYACETRPWNQGAR 217
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L E + +D++ N+ I R+GA ++ L + S++++LT CNTG+LAT+ YGTALGVIR L
Sbjct: 137 LAEKIYAEDVAYNEGIMRHGAAHIMQL-VKTSRVSILTICNTGALATSRYGTALGVIRQL 195
Query: 137 HGANKI 142
K+
Sbjct: 196 FYEGKL 201
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y K +L++LDQ LP + +I V+D AIK M+VRGAP
Sbjct: 8 TLESIRYTKGTLQLLDQRKLPFETVFDEIFGVDDICMAIKEMRVRGAP 55
>gi|384135279|ref|YP_005517993.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289364|gb|AEJ43474.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 340
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
++ +ARPTAVN+ +A D + ++L E +P + L Q ++ E+DI N+ IG
Sbjct: 79 WMKTARPTAVNLMQAVDELMAALEE----APPGSEADALYQRAVAIAERDIETNRRIGEL 134
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA+ + + VLTHCNTGSLAT EYGTALG++R++H A + Y ETRPY Q
Sbjct: 135 GAKWVAEHGG-----RVLTHCNTGSLATVEYGTALGILRAMHEAGTLEHVYVDETRPYLQ 189
Query: 286 GAR 288
GAR
Sbjct: 190 GAR 192
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 99/216 (45%), Gaps = 60/216 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA-------------- 49
+++I Y+ L++LDQ LPH + ED YQAI+SMQVRGA
Sbjct: 1 MRAIRYQPDRLELLDQTRLPHEKVWLTCRTAEDVYQAIRSMQVRGAPAIGAAAAFGLALE 60
Query: 50 -------------PAIA------------IVGCLGLVVDIKDKQFPDNE---LIQLIESM 81
P +A ++ + ++ ++ P +E L Q ++
Sbjct: 61 ARRIGPADVRSRLPQVAAWMKTARPTAVNLMQAVDELMAALEEAPPGSEADALYQRAVAI 120
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
E+DI N+ IG GA+ + + RV LTHCNTGSLAT EYGTALG++R++H A
Sbjct: 121 AERDIETNRRIGELGAKWVAEHGGRV-----LTHCNTGSLATVEYGTALGILRAMHEAGT 175
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ + YV E YL AR TA +
Sbjct: 176 LEHV-------------YVDETRPYLQGARLTAYEL 198
>gi|342186193|emb|CCC95679.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 390
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+ +++ E +++ARPTAVN+ + + + E KA NTV +QL E + D
Sbjct: 87 VRQFLMESCVKIMAARPTAVNLSKVLLQLMQDI-EAIKADSANTVVDACVQLAEKIYAAD 145
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
++ N++I ++GA + + P KLNVLT CNTG+LAT+ YGTALGV+R L +
Sbjct: 146 VAFNESIMQHGASHFMKITPK-KKLNVLTICNTGALATSRYGTALGVVRQLFYDGHLQQL 204
Query: 276 YCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 205 YACETRPWNQGAR 217
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 56/189 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP--------AIAI 54
+L+SI Y + L++LDQ LP + V+I +V+D AIK MQVRGAP AIA+
Sbjct: 8 TLESIKYSRGKLQLLDQRRLPLETVYVNITSVDDICHAIKEMQVRGAPAIAVSAALAIAV 67
Query: 55 VG-------------------------C-----------------LGLVVDIKDKQFPD- 71
V C L L+ DI+ +
Sbjct: 68 VAEREHRQRQTSTWETAAEVRQFLMESCVKIMAARPTAVNLSKVLLQLMQDIEAIKADSA 127
Query: 72 ----NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYG 127
+ +QL E + D++ N++I ++GA + + P+ KLNVLT CNTG+LAT+ YG
Sbjct: 128 NTVVDACVQLAEKIYAADVAFNESIMQHGASHFMKITPK-KKLNVLTICNTGALATSRYG 186
Query: 128 TALGVIRSL 136
TALGV+R L
Sbjct: 187 TALGVVRQL 195
>gi|313471336|sp|D0A8W2.1|MTNA_TRYB9 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|261335119|emb|CBH18113.1| translation initiation factor 2 subunit,putative [Trypanosoma
brucei gambiense DAL972]
Length = 386
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D + +++ D ++SARPTAVN+ + +K + E KA+ + V +QL E +
Sbjct: 85 DDMRQFLLMSCDKMMSARPTAVNLSKVLIQLKKDI-ETDKANTMEAVLETCVQLAEKIYA 143
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
D+S N+ I R+GA L+ L ++N+LT CNTG+LAT+ YGTALG++R L +
Sbjct: 144 ADVSFNERIMRHGAAHLLKL-ASKERVNILTICNTGALATSRYGTALGIVRQLFYEGHLQ 202
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 203 HLYACETRPWNQGAR 217
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+QL E + D+S N+ I R+GA L+ L + ++N+LT CNTG+LAT+ YGTALG++R
Sbjct: 135 VQLAEKIYAADVSFNERIMRHGAAHLLKLASK-ERVNILTICNTGALATSRYGTALGIVR 193
Query: 135 SL 136
L
Sbjct: 194 QL 195
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y + L++LDQ LP + DI +++D AIK M+VRGAP
Sbjct: 7 TLESIKYRRGVLQLLDQRRLPLETVYCDITSIDDICCAIKEMRVRGAP 54
>gi|74025196|ref|XP_829164.1| translation initiation factor 2 subunit [Trypanosoma brucei
TREU927]
gi|122100039|sp|Q383H9.1|MTNA_TRYB2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|70834550|gb|EAN80052.1| translation initiation factor 2 subunit, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 386
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D + +++ D ++SARPTAVN+ + +K + E KA+ + V +QL E +
Sbjct: 85 DDMRQFLLMSCDKMMSARPTAVNLSKVLIQLKKDI-ETDKANTMEAVLETCVQLAEKIYA 143
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
D+S N+ I R+GA L+ L ++N+LT CNTG+LAT+ YGTALG++R L +
Sbjct: 144 ADVSFNERIMRHGAAHLLKL-ASKERVNILTICNTGALATSRYGTALGIVRQLFYEGHLQ 202
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 203 HLYACETRPWNQGAR 217
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+QL E + D+S N+ I R+GA L+ L + ++N+LT CNTG+LAT+ YGTALG++R
Sbjct: 135 VQLAEKIYAADVSFNERIMRHGAAHLLKLASK-ERVNILTICNTGALATSRYGTALGIVR 193
Query: 135 SL 136
L
Sbjct: 194 QL 195
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y + L++LDQ LP + DI +++D AIK M+VRGAP
Sbjct: 7 TLESIKYRRGVLQLLDQRRLPLETVYCDITSIDDICCAIKEMRVRGAP 54
>gi|448110838|ref|XP_004201703.1| Piso0_001902 [Millerozyma farinosa CBS 7064]
gi|359464692|emb|CCE88397.1| Piso0_001902 [Millerozyma farinosa CBS 7064]
Length = 402
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 103/190 (54%), Gaps = 58/190 (30%)
Query: 3 SLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L++I ++K ++K ILDQL +P+ +K V IN +EDAYQAIK MQVRGAPAIAIVG +
Sbjct: 6 ALEAIKFDKDAIKLEILDQLCIPYQTKYVRINGIEDAYQAIKKMQVRGAPAIAIVGAFAV 65
Query: 61 VVD----IKDK------QF-----------PD--------NELIQLIE------------ 79
+V+ IK K +F P NE++++I
Sbjct: 66 LVEASEAIKQKRGLYLTEFLKSIEYLITSRPTAVNLSKACNEIMEMISNRFDTKQQISLD 125
Query: 80 ----------SMLEKDISDNKAIGRNGA----QALIDLNPRVSKLNVLTHCNTGSLATAE 125
S+ E D+ +N +IG NG + L D N + +++T CNTGSLAT+
Sbjct: 126 VFNDIKNYAISLYEDDLKNNYSIGENGVNYIKKTLRDENFK-GPFSIITICNTGSLATSG 184
Query: 126 YGTALGVIRS 135
+GTALG++R+
Sbjct: 185 HGTALGIVRT 194
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS------EWAKASPVNTVKTRLIQLIESMLEKDIS 217
++YL+++RPTAVN+ +A + + +S + N +K I S+ E D+
Sbjct: 88 IEYLITSRPTAVNLSKACNEIMEMISNRFDTKQQISLDVFNDIKNYAI----SLYEDDLK 143
Query: 218 DNKAIGRNGA----QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH------ 267
+N +IG NG + L D N +++T CNTGSLAT+ +GTALG++R+
Sbjct: 144 NNYSIGENGVNYIKKTLRDENFK-GPFSIITICNTGSLATSGHGTALGIVRTAFSDLSKD 202
Query: 268 -GAN-KIGAAYCTETRPYNQGAR 288
G + + Y ETRPYNQG+R
Sbjct: 203 SGEDFWVDHVYPCETRPYNQGSR 225
>gi|349581921|dbj|GAA27078.1| K7_Ypr118wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 411
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKA----------------------IGRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA +G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 206 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 240
>gi|349805617|gb|AEQ18281.1| putative methylthioribose-1-phosphate isomerase [Hymenochirus
curtipes]
Length = 174
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
+IQ ES+L+KD+ DN+ IG GA+ ++ + ++THCNTGSLATA YGTALGV
Sbjct: 4 VIQWAESLLKKDVEDNRMIGDLGAKHILQNVEPTENVCLMTHCNTGSLATAGYGTALGVA 63
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RSLH ++ +CTETRPYNQG+R
Sbjct: 64 RSLHSLGRLSHVFCTETRPYNQGSR 88
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 6/111 (5%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+IQ ES+L+KD+ DN+ IG GA+ ++ + ++THCNTGSLATA YGTALGV
Sbjct: 4 VIQWAESLLKKDVEDNRMIGDLGAKHILQNVEPTENVCLMTHCNTGSLATAGYGTALGVA 63
Query: 134 RSLHGANKIVDI---KDKQFPDNDSLEKY--VGEKLD-YLVSARPTAVNMK 178
RSLH ++ + + + + L Y V EK+ L++ +V MK
Sbjct: 64 RSLHSLGRLSHVFCTETRPYNQGSRLTAYELVYEKIPATLITDSMASVTMK 114
>gi|6325375|ref|NP_015443.1| S-methyl-5-thioribose-1-phosphate isomerase MRI1 [Saccharomyces
cerevisiae S288c]
gi|3183489|sp|Q06489.1|MTNA_YEAST RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|313471340|sp|B3LK82.1|MTNA_YEAS1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|313471341|sp|B5VTQ8.1|MTNA_YEAS6 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|313471359|sp|C8ZJE0.1|MTNA_YEAS8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|313471373|sp|A6ZWZ9.1|MTNA_YEAS7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|1066474|gb|AAB68059.1| Ypr118wp [Saccharomyces cerevisiae]
gi|151942895|gb|EDN61241.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408045|gb|EDV11310.1| hypothetical protein SCRG_02596 [Saccharomyces cerevisiae RM11-1a]
gi|207340305|gb|EDZ68699.1| YPR118Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259150268|emb|CAY87071.1| EC1118_1P2_4456p [Saccharomyces cerevisiae EC1118]
gi|285815641|tpg|DAA11533.1| TPA: S-methyl-5-thioribose-1-phosphate isomerase MRI1
[Saccharomyces cerevisiae S288c]
gi|323306846|gb|EGA60131.1| YPR118W-like protein [Saccharomyces cerevisiae FostersO]
gi|323335183|gb|EGA76473.1| YPR118W-like protein [Saccharomyces cerevisiae Vin13]
gi|392296122|gb|EIW07225.1| Mri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 411
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKA----------------------IGRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA +G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 206 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 240
>gi|313471358|sp|C7GXT0.1|MTNA_YEAS2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|256269068|gb|EEU04405.1| YPR118W-like protein [Saccharomyces cerevisiae JAY291]
Length = 411
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSELENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKA----------------------IGRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA +G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 206 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 240
>gi|365762585|gb|EHN04119.1| YPR118W-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 309
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKA----------------------IGRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA +G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILKS---SSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 206 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 240
>gi|323331350|gb|EGA72768.1| YPR118W-like protein [Saccharomyces cerevisiae AWRI796]
Length = 403
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 104/200 (52%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLINWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKA----------------------IGRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA +G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 206 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 240
>gi|358057100|dbj|GAA97007.1| hypothetical protein E5Q_03681 [Mixia osmundae IAM 14324]
Length = 419
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 84/131 (64%), Gaps = 9/131 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
DYL+S+RPTAVN+ A ++ +++ K+ P + +++ +S+ + DI+ N IG
Sbjct: 122 DYLLSSRPTAVNLSAAIKLIRR-VTQANKSEPAEQLVQAIVKTCKSVWQDDIARNVWIGM 180
Query: 225 NGAQALID-------LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NGA+ L++ L P S +NVLT CNTGSLAT++YGTALGVI +LH ++ A+
Sbjct: 181 NGARWLLETLEREGSLKPDES-VNVLTVCNTGSLATSDYGTALGVITALHELGRLEHAFY 239
Query: 278 TETRPYNQGAR 288
+T PY QGAR
Sbjct: 240 AQTAPYQQGAR 250
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 10/82 (12%)
Query: 66 DKQFPDNELIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPRVSKL------NVLTH 115
+K P +L+Q I +S+ + DI+ N IG NGA+ L++ R L NVLT
Sbjct: 148 NKSEPAEQLVQAIVKTCKSVWQDDIARNVWIGMNGARWLLETLEREGSLKPDESVNVLTV 207
Query: 116 CNTGSLATAEYGTALGVIRSLH 137
CNTGSLAT++YGTALGVI +LH
Sbjct: 208 CNTGSLATSDYGTALGVITALH 229
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
K ++I+DQLLLPH + + I + E A+ AI+SMQ+RGAP
Sbjct: 30 KGYVEIVDQLLLPHHIEWIKITSAEQAWHAIRSMQIRGAP 69
>gi|448096828|ref|XP_004198526.1| Piso0_001902 [Millerozyma farinosa CBS 7064]
gi|359379948|emb|CCE82189.1| Piso0_001902 [Millerozyma farinosa CBS 7064]
Length = 402
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 58/190 (30%)
Query: 3 SLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L++I ++K + L+ILDQL +P+ +K V IN +EDAYQAIK MQVRGAPAIAIVG +
Sbjct: 6 ALEAIKFDKDAIRLEILDQLCIPYQTKYVRINGIEDAYQAIKKMQVRGAPAIAIVGAFAI 65
Query: 61 VVD----IKDK------QF-----------PD--------NELIQLIE------------ 79
+V+ IK K +F P NE+ ++I
Sbjct: 66 LVEASEAIKQKRCLYLTEFLKSIEYLITSRPTAVNLSKACNEITEMISNRFDTKQQIDLN 125
Query: 80 ----------SMLEKDISDNKAIGRNGA----QALIDLNPRVSKLNVLTHCNTGSLATAE 125
S+ E D+ +N +IG NG + L + N R +++T CNTGSLAT+
Sbjct: 126 VLNDIKNYAISLYEDDLRNNYSIGENGVNYIKKTLKEENFR-GPFSIITICNTGSLATSG 184
Query: 126 YGTALGVIRS 135
+GTALG++R+
Sbjct: 185 HGTALGIVRT 194
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 78/142 (54%), Gaps = 21/142 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS------EWAKASPVNTVKTRLIQLIESMLEKDIS 217
++YL+++RPTAVN+ +A + + +S + + +N +K I S+ E D+
Sbjct: 88 IEYLITSRPTAVNLSKACNEITEMISNRFDTKQQIDLNVLNDIKNYAI----SLYEDDLR 143
Query: 218 DNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH------- 267
+N +IG NG + + +++T CNTGSLAT+ +GTALG++R+
Sbjct: 144 NNYSIGENGVNYIKKTLKEENFRGPFSIITICNTGSLATSGHGTALGIVRTAFSDLSKDA 203
Query: 268 GAN-KIGAAYCTETRPYNQGAR 288
G + + Y ETRPYNQG+R
Sbjct: 204 GEDFWVDHVYPCETRPYNQGSR 225
>gi|258511613|ref|YP_003185047.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478339|gb|ACV58658.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 340
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 76/123 (61%), Gaps = 9/123 (7%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
++ +ARPTAVN+ +A D V ++L E +P + L Q ++ E+DI N+ IG
Sbjct: 79 WMKTARPTAVNLMQAIDEVMAALEE----APPGSEADALYQRAVAIAERDIETNRRIGEM 134
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA+ + + G VLTHCNTGSLAT EYGTALG++R++H + Y ETRPY Q
Sbjct: 135 GAK-WVAKHGG----RVLTHCNTGSLATVEYGTALGILRAMHEVGTLEHVYVDETRPYLQ 189
Query: 286 GAR 288
GAR
Sbjct: 190 GAR 192
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 60/217 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA-------------- 49
+++I Y+ L++LDQ LPH + V ED YQAI+SMQVRGA
Sbjct: 1 MRAIRYQPDRLELLDQTRLPHETVWVTCRTAEDVYQAIRSMQVRGAPAIGAAAAFGLALE 60
Query: 50 -------------PAIA------------IVGCLGLVVDIKDKQFPDNE---LIQLIESM 81
P +A ++ + V+ ++ P +E L Q ++
Sbjct: 61 ARRLGPANVRSRLPEVAAWMKTARPTAVNLMQAIDEVMAALEEAPPGSEADALYQRAVAI 120
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
E+DI N+ IG GA+ + RV LTHCNTGSLAT EYGTALG++R++H
Sbjct: 121 AERDIETNRRIGEMGAKWVAKHGGRV-----LTHCNTGSLATVEYGTALGILRAMHEVGT 175
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
+ + YV E YL AR TA ++
Sbjct: 176 LEHV-------------YVDETRPYLQGARLTAYELQ 199
>gi|260940136|ref|XP_002614368.1| hypothetical protein CLUG_05854 [Clavispora lusitaniae ATCC 42720]
gi|313471308|sp|C4YC37.1|MTNA_CLAL4 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238852262|gb|EEQ41726.1| hypothetical protein CLUG_05854 [Clavispora lusitaniae ATCC 42720]
Length = 402
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 100/193 (51%), Gaps = 57/193 (29%)
Query: 3 SLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L++I ++K +L ILDQLLLP+ S+ ++I +++DA++AIKSMQVRGAPAIAIVG +
Sbjct: 5 TLEAIRFDKENVTLDILDQLLLPYESRYINIKSIQDAFEAIKSMQVRGAPAIAIVGAFAI 64
Query: 61 VVDIK--------DKQFPD----------------------NELIQLIESMLEK------ 84
VD K D NE+ L+ S EK
Sbjct: 65 TVDTHLYLKSGETSKTVADLLNSIDYLVTSRPTAVNLANACNEIKALLVSHFEKSDLVTE 124
Query: 85 ----------------DISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATAE 125
D+ +N IG NG + + + L + K +++T CNTGSLAT+
Sbjct: 125 KVWKLLFDYSVSLHEDDLRNNFKIGENGLRFISETLKAQNFKGPFSIVTVCNTGSLATSG 184
Query: 126 YGTALGVIRSLHG 138
+GTALGVIR++H
Sbjct: 185 HGTALGVIRTVHA 197
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 14/139 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNKA 221
+DYLV++RPTAVN+ A + +K+ L + S + T K L S+ E D+ +N
Sbjct: 88 IDYLVTSRPTAVNLANACNEIKALLVSHFEKSDLVTEKVWKLLFDYSVSLHEDDLRNNFK 147
Query: 222 IGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG------ANK- 271
IG NG + + + +++T CNTGSLAT+ +GTALGVIR++H +N+
Sbjct: 148 IGENGLRFISETLKAQNFKGPFSIVTVCNTGSLATSGHGTALGVIRTVHAQLSKSVSNEE 207
Query: 272 --IGAAYCTETRPYNQGAR 288
Y ETRPYNQGA+
Sbjct: 208 FWFEHVYPLETRPYNQGAK 226
>gi|50286367|ref|XP_445612.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610691|sp|Q6FVY2.1|MTNA_CANGA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|49524917|emb|CAG58523.1| unnamed protein product [Candida glabrata]
Length = 415
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 89/163 (54%), Gaps = 32/163 (19%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D +++ + E+L +L+S+RPTA+N+ A D +K L AS + T K L + +
Sbjct: 88 DWENIRSKIDERLAFLLSSRPTAINLSNALDEIKIVLDS---ASDLQTFKNNLFDYVCKL 144
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLN------VLTHCNTGSLATAEYGTALGVIRS 265
++ D ++NK +G NGA+ L++L + K N V T CNTGSLAT+ YGTALGVIRS
Sbjct: 145 IDDDFANNKRMGDNGAEFLLNL---LKKENFNEDFAVFTICNTGSLATSGYGTALGVIRS 201
Query: 266 L--------------------HGANKIGAAYCTETRPYNQGAR 288
L + K+ + ETRPYNQG+R
Sbjct: 202 LWNDSKSKTQEGNPNKKVKLTESSPKMVQVFPLETRPYNQGSR 244
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 49/68 (72%), Gaps = 5/68 (7%)
Query: 1 MKSLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV 55
M +L++I +++ S+ +LDQLLLP+T+K + I ++D + IK MQVRGAPAIAIV
Sbjct: 1 MNALRAIDFKRDDPNNVSVSVLDQLLLPYTTKYIPIYTIDDGFTVIKKMQVRGAPAIAIV 60
Query: 56 GCLGLVVD 63
G L ++++
Sbjct: 61 GALSVLME 68
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 66 DKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLA 122
D Q N L + +++ D ++NK +G NGA+ L++L + + V T CNTGSLA
Sbjct: 129 DLQTFKNNLFDYVCKLIDDDFANNKRMGDNGAEFLLNLLKKENFNEDFAVFTICNTGSLA 188
Query: 123 TAEYGTALGVIRSLHGANK 141
T+ YGTALGVIRSL +K
Sbjct: 189 TSGYGTALGVIRSLWNDSK 207
>gi|254492125|ref|ZP_05105300.1| methylthioribose-1-phosphate isomerase [Methylophaga thiooxidans
DMS010]
gi|224462677|gb|EEF78951.1| methylthioribose-1-phosphate isomerase [Methylophaga thiooxydans
DMS010]
Length = 349
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 65/224 (29%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K+++ II+ ++SL +LDQ +LPH + ++ N+ +AIK+M VRGAPAI + G+V
Sbjct: 6 KTIEPIIWRENSLFLLDQRVLPHQQRWLEFNDSSAVAEAIKTMVVRGAPAIGVTAAYGVV 65
Query: 62 V----------------------------------------------DIKDKQFPDNELI 75
+ ++ Q P++ L+
Sbjct: 66 LAARQAWDMAAVNWKEALTASLDELADSRPTAVNLFWAIQQMQRVMDELASDQSPEHHLL 125
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ + + +D+ NK +G+ GA AL+D N +LTHCN G+LATA +GTALGVIR
Sbjct: 126 EAAQLIHRQDVEANKKLGQFGA-ALLDDNS-----TILTHCNAGALATAGFGTALGVIR- 178
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ F DN YV E +L +R TA + +
Sbjct: 179 ------------QGFSDNKVTHVYVNETRPWLQGSRLTAWELMQ 210
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 74/126 (58%), Gaps = 11/126 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTVKTRLIQLIESMLEKDISDNKAI 222
LD L +RPTAVN+ A ++ + E A SP + L++ + + +D+ NK +
Sbjct: 87 LDELADSRPTAVNLFWAIQQMQRVMDELASDQSP----EHHLLEAAQLIHRQDVEANKKL 142
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
G+ GA AL+D N +LTHCN G+LATA +GTALGVIR NK+ Y ETRP
Sbjct: 143 GQFGA-ALLDDNS-----TILTHCNAGALATAGFGTALGVIRQGFSDNKVTHVYVNETRP 196
Query: 283 YNQGAR 288
+ QG+R
Sbjct: 197 WLQGSR 202
>gi|393244832|gb|EJD52343.1| Methylthioribose-1-phosphate isomerase [Auricularia delicata
TFB-10046 SS5]
Length = 378
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 84/139 (60%), Gaps = 6/139 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D +L +V LD++ +ARPTAVN+ A ++ L A V V +L+ ++
Sbjct: 79 DVAALRAHVAPLLDFVYTARPTAVNLGAAVTRLRGVL---ASDGAVRDVAQKLVLEGRAV 135
Query: 212 LEKDISDNKAIGRNGAQALIDL--NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
++D+ N+ + R GA+ L+ L +P LNVLT CNTGSLAT+ YGTALGVI LH
Sbjct: 136 ADEDVGRNREMSRRGAEWLVQLAGDPA-DGLNVLTVCNTGSLATSGYGTALGVITHLHET 194
Query: 270 NKIGAAYCTETRPYNQGAR 288
K+ A+ T++ PY+QG+R
Sbjct: 195 GKLRRAFFTQSAPYHQGSR 213
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDL--NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
++ ++D+ N+ + R GA+ L+ L +P LNVLT CNTGSLAT+ YGTALGVI L
Sbjct: 133 RAVADEDVGRNREMSRRGAEWLVQLAGDP-ADGLNVLTVCNTGSLATSGYGTALGVITHL 191
Query: 137 HGANKI 142
H K+
Sbjct: 192 HETGKL 197
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAI 52
M +L SI ++I+DQLLLPH + V+I +V DA+ AIKSM++RGAPAI
Sbjct: 1 MAALVSIRTTGDKIEIVDQLLLPHVVQYVEITSVHDAHAAIKSMRIRGAPAI 52
>gi|380478426|emb|CCF43609.1| S-methyl-5-thioribose-1-phosphate isomerase, partial
[Colletotrichum higginsianum]
Length = 283
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 4/83 (4%)
Query: 209 ESMLEKDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
ES+L KD+ N +IG +GAQ L D+ +P SK+++LTHCNTGSLAT+ +GTALG+IR+
Sbjct: 25 ESILRKDLQTNLSIGDHGAQWLKDVAGASPD-SKISILTHCNTGSLATSGHGTALGIIRT 83
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
L N + AYCTETRPYNQG+R
Sbjct: 84 LWSGNLLQHAYCTETRPYNQGSR 106
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
ES+L KD+ N +IG +GAQ L D+ +P SK+++LTHCNTGSLAT+ +GTALG+IR+
Sbjct: 25 ESILRKDLQTNLSIGDHGAQWLKDVAGASPD-SKISILTHCNTGSLATSGHGTALGIIRT 83
Query: 136 LHGAN 140
L N
Sbjct: 84 LWSGN 88
>gi|367015714|ref|XP_003682356.1| hypothetical protein TDEL_0F03340 [Torulaspora delbrueckii]
gi|359750018|emb|CCE93145.1| hypothetical protein TDEL_0F03340 [Torulaspora delbrueckii]
Length = 414
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I +++ S+K+LDQLLLP+T+K + I ++D Y IK+MQVRGAPAIAIVG
Sbjct: 2 SLEAIKFDRSEPRHVSVKVLDQLLLPYTTKYIPIYTIDDGYSVIKTMQVRGAPAIAIVGT 61
Query: 58 LGLVVDI---------KDKQFPD--------NELIQLIESML------------------ 82
L ++ ++ K + F D L+Q I+ +L
Sbjct: 62 LSVLTEVQLLQSESYTKSQWFYDLTNWESVRERLLQRIDYLLSSRPTAVNLYNSIKDIRI 121
Query: 83 -----------------------EKDISDNKAIGRNGAQALI-DLNPR--VSKLNVLTHC 116
++D+ +N +G NGA L+ DL VLT C
Sbjct: 122 LVGESQRLQALDEKLFAYTCQLIDQDLLNNMKMGDNGASFLLNDLQEEGFEGDFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 25/157 (15%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S+ + + +++DYL+S+RPTAVN+ + ++ + E + + + +L +++
Sbjct: 89 ESVRERLLQRIDYLLSSRPTAVNLYNSIKDIRILVGE---SQRLQALDEKLFAYTCQLID 145
Query: 214 KDISDNKAIGRNGAQALI-DLNP-GVS-KLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+ +N +G NGA L+ DL G VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 QDLLNNMKMGDNGASFLLNDLQEEGFEGDFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 267 ---------------HGANKIGAAYCTETRPYNQGAR 288
+ +K+ + ETRPYNQG+R
Sbjct: 206 MVKSKSSGSKKAKISNSNSKLTHVFPLETRPYNQGSR 242
>gi|51247995|pdb|1W2W|A Chain A, Crystal Structure Of Yeast Ypr118w, A Methylthioribose-1-
Phosphate Isomerase Related To Regulatory Eif2b Subunits
gi|51247997|pdb|1W2W|E Chain E, Crystal Structure Of Yeast Ypr118w, A Methylthioribose-1-
Phosphate Isomerase Related To Regulatory Eif2b Subunits
gi|51247999|pdb|1W2W|I Chain I, Crystal Structure Of Yeast Ypr118w, A Methylthioribose-1-
Phosphate Isomerase Related To Regulatory Eif2b Subunits
gi|51248001|pdb|1W2W|M Chain M, Crystal Structure Of Yeast Ypr118w, A Methylthioribose-1-
Phosphate Isomerase Related To Regulatory Eif2b Subunits
Length = 211
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I++++ S+K+LDQLLLP+T+K V I+ ++D Y IKS QVRGAPAIAIVG
Sbjct: 2 SLEAIVFDRSEPENVSVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSXQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK-DKQFPDNEL------------------------------IQLIESMLE--- 83
L ++ +++ K P +++ + L S++E
Sbjct: 62 LSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKN 121
Query: 84 --KDISDNKAI----------------------GRNGAQALIDL---NPRVSKLNVLTHC 116
K SD KA G NGA+ LID+ + + VLT C
Sbjct: 122 ILKSSSDLKAFDGSLYNYVCELIDEDLANNXKXGDNGAKYLIDVLQKDGFKDEFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 89 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILKS---SSDLKAFDGSLYNYVCELID 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL 266
+D+++N G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLANNXKXGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSL 201
>gi|284161258|ref|YP_003399881.1| translation initiation factor, aIF-2BI family [Archaeoglobus
profundus DSM 5631]
gi|284011255|gb|ADB57208.1| translation initiation factor, aIF-2BI family [Archaeoglobus
profundus DSM 5631]
Length = 348
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 84/143 (58%), Gaps = 11/143 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
++ F D D L+++V ++ + L S RPTAVN+ D V L S V ++ + ++
Sbjct: 63 ERDFKDVDELKEHVKKRAELLASTRPTAVNLFYGIDRV---LEVVLSGSDVEEIRKKALE 119
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS- 265
E + E+D+ NK +G+ GA+ L D + VLT+CNTG LAT +YGTALGVIRS
Sbjct: 120 EAERIAEEDVRRNKLMGKYGAELLEDGD------TVLTYCNTGRLATVDYGTALGVIRSA 173
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ KI C ETRP NQG+R
Sbjct: 174 VEQGKKIKVIAC-ETRPLNQGSR 195
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 52/178 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I +E +++K++DQ LLP K++ V++ AIK + VRGAPA+ G G+ +
Sbjct: 1 MRTIYWEDNAVKLIDQTLLPDEFKIITCRTVDELADAIKRLAVRGAPALEASGAYGVALA 60
Query: 64 IKDKQFPD-----------------------------NELIQLI---------------- 78
++ F D + +++++
Sbjct: 61 CYERDFKDVDELKEHVKKRAELLASTRPTAVNLFYGIDRVLEVVLSGSDVEEIRKKALEE 120
Query: 79 -ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E + E+D+ NK +G+ GA+ L D + VLT+CNTG LAT +YGTALGVIRS
Sbjct: 121 AERIAEEDVRRNKLMGKYGAELLEDGD------TVLTYCNTGRLATVDYGTALGVIRS 172
>gi|149248506|ref|XP_001528640.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|313471322|sp|A5DUX4.1|MTNA_LODEL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|146448594|gb|EDK42982.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 403
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 56/193 (29%)
Query: 2 KSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++LQ+I +++ +L ILDQL+LP+++ + I +++DAY AIKSMQVRGAPAIAIVG
Sbjct: 6 RTLQAIKFDRQNVTLDILDQLVLPYSTTYISIKSIDDAYNAIKSMQVRGAPAIAIVGAFA 65
Query: 60 LVVDI------KD----------------KQFPD--------NELIQLIES--------- 80
+VVDI KD + P N++ Q++ S
Sbjct: 66 IVVDIYNNLKSKDGNSSIGDLQTSLQHLLRSRPTAVNLANAINDIEQILCSYETSEVLNE 125
Query: 81 ------------MLEKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATAE 125
+ + D+++N IG NG + +++ L K +++T CNTGSLAT+
Sbjct: 126 SIYKQIFDYATRLYDDDLANNHKIGENGLKYIVESLKQENFKGPFSIITICNTGSLATSG 185
Query: 126 YGTALGVIRSLHG 138
+GTALG+IRS +
Sbjct: 186 HGTALGIIRSTYA 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN-TVKTRLIQLIESMLEKDISDNKAI 222
L +L+ +RPTAVN+ A + ++ L + + +N ++ ++ + + D+++N I
Sbjct: 90 LQHLLRSRPTAVNLANAINDIEQILCSYETSEVLNESIYKQIFDYATRLYDDDLANNHKI 149
Query: 223 GRNGAQALID-LNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGA---------N 270
G NG + +++ L K +++T CNTGSLAT+ +GTALG+IRS +
Sbjct: 150 GENGLKYIVESLKQENFKGPFSIITICNTGSLATSGHGTALGIIRSTYAKLHKEVSGEDF 209
Query: 271 KIGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 210 FLDHVYPCETRPYNQGAK 227
>gi|328854348|gb|EGG03481.1| hypothetical protein MELLADRAFT_65615 [Melampsora larici-populina
98AG31]
Length = 460
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 87/141 (61%), Gaps = 9/141 (6%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSS---LSEWAKASPVNTVKTRLIQLIESML 212
L+ Y+ + +L+SARPTAVN++ A V + + E + +L+ + +++
Sbjct: 94 LQNYLEKTSQHLLSARPTAVNLREALLRVAQAFHKIHEQGGERDPKKITEKLVAVCKAVW 153
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVS-----KLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E+D+ NK IG NGA+ LI+ G+S K+++LT CNTGSLATA +GTALGVI +LH
Sbjct: 154 EEDLERNKKIGYNGARWLIN-KLGISDRPERKISMLTVCNTGSLATAGFGTALGVITALH 212
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ AY +T PY QGAR
Sbjct: 213 ELGRLEHAYYMQTGPYMQGAR 233
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 54/77 (70%), Gaps = 4/77 (5%)
Query: 65 KDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALID---LNPRVS-KLNVLTHCNTGS 120
+D + +L+ + +++ E+D+ NK IG NGA+ LI+ ++ R K+++LT CNTGS
Sbjct: 136 RDPKKITEKLVAVCKAVWEEDLERNKKIGYNGARWLINKLGISDRPERKISMLTVCNTGS 195
Query: 121 LATAEYGTALGVIRSLH 137
LATA +GTALGVI +LH
Sbjct: 196 LATAGFGTALGVITALH 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+ E S++I+DQL+LPH K ++N +A++AIKSM++RGAPAI + L + ++
Sbjct: 13 LEETRSVEIIDQLILPHELKWCKVSNTNEAFEAIKSMKIRGAPAIGSIAALSIACEL 69
>gi|407841351|gb|EKG00716.1| translation initiation factor 2 subunit, putative [Trypanosoma
cruzi]
Length = 297
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
KD D +++ E D +++ARPTAVN+ + +K +++ + V+ +
Sbjct: 76 KDGACNSVDGTRRFLLESCDTVMTARPTAVNLSKTLIQMKRDIADVTANTAGGLVEACAV 135
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
L E + +D++ N+ I R+GA L L SKL+VLT CNTG+LAT+ YGTALGV+R
Sbjct: 136 -LAEKIYAEDVAYNEGIMRHGAAHLTQLVKK-SKLSVLTICNTGALATSRYGTALGVVRQ 193
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
L K+ Y ETRP+NQGAR
Sbjct: 194 LFYEGKLEQVYACETRPWNQGAR 216
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L E + +D++ N+ I R+GA L L + SKL+VLT CNTG+LAT+ YGTALGV+R L
Sbjct: 136 LAEKIYAEDVAYNEGIMRHGAAHLTQLVKK-SKLSVLTICNTGALATSRYGTALGVVRQL 194
Query: 137 HGANKI 142
K+
Sbjct: 195 FYEGKL 200
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y + +L++LDQ LP + +I V+D + AIK M+VRGAP
Sbjct: 8 TLESIQYARGTLRLLDQRKLPLETVFDEILTVDDIWTAIKEMRVRGAP 55
>gi|336371333|gb|EGN99672.1| hypothetical protein SERLA73DRAFT_106370 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384086|gb|EGO25234.1| hypothetical protein SERLADRAFT_448229 [Serpula lacrymans var.
lacrymans S7.9]
Length = 386
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 90/146 (61%), Gaps = 17/146 (11%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNM----KRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
++L +V LD+L++ARPTAVN+ +R +++SS+ A P + V L+ + E
Sbjct: 81 EALRDHVLPILDFLITARPTAVNLGAATRRLTKTLQSSID--AGKDPRSIV---LVLIAE 135
Query: 210 SML--EKDISDNKAIGRNGAQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGV 262
S L ++D+ NK + + G + LID G S LNVLT CNTGSLAT+ YGTALG+
Sbjct: 136 SHLVADEDVGRNKEMSKWGGEWLIDQVKQAGGDGTS-LNVLTVCNTGSLATSGYGTALGL 194
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
I LH +G AY T+T PY+QG+R
Sbjct: 195 ITYLHEVGNLGKAYYTQTAPYHQGSR 220
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M + SI ++I++QLLLPHT++ ++I +E A+ AIKSM++RGAPAIA + L
Sbjct: 1 MAPMTSIRLSGDKIEIVNQLLLPHTTEFIEIQTIEQAHDAIKSMKIRGAPAIASLAALSF 60
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 74 LIQLIESML--EKDISDNKAIGRNGAQALIDLNPRV----SKLNVLTHCNTGSLATAEYG 127
L+ + ES L ++D+ NK + + G + LID + + LNVLT CNTGSLAT+ YG
Sbjct: 130 LVLIAESHLVADEDVGRNKEMSKWGGEWLIDQVKQAGGDGTSLNVLTVCNTGSLATSGYG 189
Query: 128 TALGVIRSLH 137
TALG+I LH
Sbjct: 190 TALGLITYLH 199
>gi|312375497|gb|EFR22859.1| hypothetical protein AND_14088 [Anopheles darlingi]
Length = 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 10/118 (8%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV----KSSLSEWAKASPV 197
+V+I KQ+ + L + + L YLV++RPTAVN+K AAD V S L E K +
Sbjct: 82 VVEIYGKQYETKEELHAELSKHLQYLVTSRPTAVNLKLAADDVLAQANSLLDE--KTTDA 139
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATA 254
T+K +I+ IE MLEKDI DN+AIG NGA L+ G+ + L +LTHCNTGSLATA
Sbjct: 140 ETMKKSIIESIEQMLEKDIKDNRAIGDNGANVLLK---GIDRPLKLLTHCNTGSLATA 194
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 91/195 (46%), Gaps = 75/195 (38%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSM------------------ 44
+L++I Y++ L+ILDQLLLP S+ + I VED +++I +M
Sbjct: 2 TLEAIKYKQGQLQILDQLLLPGESRYISIAGVEDGWRSINTMQVCFVLPGKDAYEERLTI 61
Query: 45 ----QVRGAPAIAIVGCLGLVVDIKDKQFPDNE--------------------------- 73
QVRGAPAIAIVGCL LVV+I KQ+ E
Sbjct: 62 PVLFQVRGAPAIAIVGCLSLVVEIYGKQYETKEELHAELSKHLQYLVTSRPTAVNLKLAA 121
Query: 74 ------------------------LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK 109
+I+ IE MLEKDI DN+AIG NGA L+ R
Sbjct: 122 DDVLAQANSLLDEKTTDAETMKKSIIESIEQMLEKDIKDNRAIGDNGANVLLKGIDR--P 179
Query: 110 LNVLTHCNTGSLATA 124
L +LTHCNTGSLATA
Sbjct: 180 LKLLTHCNTGSLATA 194
>gi|345859711|ref|ZP_08812045.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus sp. OT]
gi|344327168|gb|EGW38612.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus sp. OT]
Length = 345
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 85/167 (50%), Gaps = 20/167 (11%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A YG ALG I G D + L KY+ E + L RPTAVN+ A
Sbjct: 51 AAVAYGFALGAI-EYQG-------------DLEGLPKYMEEVQNRLAETRPTAVNLFWAL 96
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
++ L E ++ V+ L++ + E D N+ IG++G + + + K N
Sbjct: 97 RRMEDRLRECWDVEDLDEVRQILVEEAGRIAEDDRRMNRLIGQHGNEIVPE------KAN 150
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT EYGTALGVIR+ H A K Y ETRP QGAR
Sbjct: 151 VLTHCNAGALATVEYGTALGVIRAAHEAGKSIHVYADETRPLLQGAR 197
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 67/224 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++SI + +SL+ILDQ LP + + + +D +AI+ M+VRGAPAI G +
Sbjct: 1 MKSIEWLGNSLRILDQSKLPVETVYRNALSYKDVAEAIEQMEVRGAPAIGAAVAYGFALG 60
Query: 63 -----------------------------------------------DIKDKQFPDNELI 75
D++D L+
Sbjct: 61 AIEYQGDLEGLPKYMEEVQNRLAETRPTAVNLFWALRRMEDRLRECWDVEDLDEVRQILV 120
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ + E D N+ IG++G + + + K NVLTHCN G+LAT EYGTALGVIR+
Sbjct: 121 EEAGRIAEDDRRMNRLIGQHGNEIVPE------KANVLTHCNAGALATVEYGTALGVIRA 174
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
H A K S+ Y E L AR TA+ + R
Sbjct: 175 AHEAGK-------------SIHVYADETRPLLQGARLTALELLR 205
>gi|146102787|ref|XP_001469414.1| putative translation initiation factor 2 subunit [Leishmania
infantum JPCM5]
gi|398024938|ref|XP_003865630.1| translation initiation factor 2 subunit, putative [Leishmania
donovani]
gi|313471321|sp|A4ICE5.1|MTNA_LEIIN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|134073784|emb|CAM72523.1| putative translation initiation factor 2 subunit [Leishmania
infantum JPCM5]
gi|322503867|emb|CBZ38953.1| translation initiation factor 2 subunit, putative [Leishmania
donovani]
Length = 375
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 83/146 (56%), Gaps = 2/146 (1%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
+ + + ++ + D+++++RPTAVN+ +K + + V
Sbjct: 74 VANGELKSGSEVQAFFLSSCDFVMTSRPTAVNLFNCLRDLKEQVEKLDPTKAAAEVAQAC 133
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGV 262
++L E++ KD++ N+ I R+GA ++ + G K+++LT CNTG+LAT+ YGTALGV
Sbjct: 134 VELAEAVYTKDVAFNEGIMRHGAAHILAVAKAEGRDKVSILTICNTGALATSRYGTALGV 193
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
+R L K+ Y ETRP+NQGAR
Sbjct: 194 VRQLFYDGKLERVYACETRPWNQGAR 219
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 55/195 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL++LDQ LP + D+ VED + AI M+VRGAPAIA+ LG+ V
Sbjct: 9 TLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAINEMRVRGAPAIAVSAALGIAV 68
Query: 63 -------------------------------------------DIK---DKQFPDNELIQ 76
D+K +K P +
Sbjct: 69 ATQRKVANGELKSGSEVQAFFLSSCDFVMTSRPTAVNLFNCLRDLKEQVEKLDPTKAAAE 128
Query: 77 LIESMLE-------KDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
+ ++ +E KD++ N+ I R+GA ++ + K+++LT CNTG+LAT+ YG
Sbjct: 129 VAQACVELAEAVYTKDVAFNEGIMRHGAAHILAVAKAEGRDKVSILTICNTGALATSRYG 188
Query: 128 TALGVIRSLHGANKI 142
TALGV+R L K+
Sbjct: 189 TALGVVRQLFYDGKL 203
>gi|71415712|ref|XP_809913.1| translation initiation factor 2 subunit [Trypanosoma cruzi strain
CL Brener]
gi|122019616|sp|Q4D6B2.1|MTNA2_TRYCC RecName: Full=Methylthioribose-1-phosphate isomerase 2; Short=M1Pi
2; Short=MTR-1-P isomerase 2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 2;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein 2
gi|70874367|gb|EAN88062.1| translation initiation factor 2 subunit, putative [Trypanosoma
cruzi]
Length = 372
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 2/143 (1%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
KD D +++ E D +++ARPTAVN+ + +K +++ + V+ +
Sbjct: 76 KDGACNSVDGTRRFLLESCDTVMTARPTAVNLSKTLIQLKRDIADVTANTAGGLVEACAV 135
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
L E + +D++ N+ I R+GA L L SK++VLT CNTG+LAT+ YGTALGV+R
Sbjct: 136 -LAEKIYAEDVACNEGIMRHGAAHLTQLVKK-SKVSVLTICNTGALATSRYGTALGVVRQ 193
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
L K+ Y ETRP+NQGAR
Sbjct: 194 LFYEGKLEQVYACETRPWNQGAR 216
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L E + +D++ N+ I R+GA L L + SK++VLT CNTG+LAT+ YGTALGV+R L
Sbjct: 136 LAEKIYAEDVACNEGIMRHGAAHLTQLVKK-SKVSVLTICNTGALATSRYGTALGVVRQL 194
Query: 137 HGANKI 142
K+
Sbjct: 195 FYEGKL 200
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y + +L++LDQ LP + +I V+D + AIK M+VRGAP
Sbjct: 8 TLESIQYARGTLRLLDQRKLPLETVFDEILTVDDIWTAIKEMRVRGAP 55
>gi|456863872|gb|EMF82311.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira weilii
serovar Topaz str. LT2116]
Length = 362
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWTNKELILLDQRVLPGTTSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 65
Query: 60 -------------------------------LVVDIKDKQFPDNE-----LIQLIES--- 80
LV++ +FP+ + L ++ +S
Sbjct: 66 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLVIEEFFSRFPETDYSSANLKKMQKSAEE 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFANETRPYLQGARLTAWELK 211
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDISDNKA 221
KLD L+ +RPTAVN++ + S E +S + ++ + MLE+D+ +N
Sbjct: 81 KLDELLESRPTAVNLRLVIEEFFSRFPETDYSSANLKKMQKSAEEFALFMLEEDLENNLT 140
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ETR
Sbjct: 141 LSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFANETR 197
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 198 PYLQGAR 204
>gi|367001282|ref|XP_003685376.1| hypothetical protein TPHA_0D03060 [Tetrapisispora phaffii CBS 4417]
gi|357523674|emb|CCE62942.1| hypothetical protein TPHA_0D03060 [Tetrapisispora phaffii CBS 4417]
Length = 422
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 99/200 (49%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SLQ+I +++ S+ +LDQLLLP+ +K + I+ +ED Y AIKSMQVRGAPAIAIVG
Sbjct: 2 SLQAIRFDRSNPLNVSVTVLDQLLLPYVTKYIPISTIEDGYTAIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVD---IKDKQFPDNE--------------LIQLIESMLEK---------------- 84
L ++++ ++ F + LI+ ++ +LE
Sbjct: 62 LSVLMETQMMRTDLFARTQTYYDLNNWRNIKLRLIERLDWLLESRPTAVNLSNSLMEIGH 121
Query: 85 --------------------DISD-----NKAIGRNGAQALIDL---NPRVSKLNVLTHC 116
D+SD N +G NGA+ L+D VLT C
Sbjct: 122 LLDASDDLTKFNSKLFNYVCDLSDDDLKNNIKLGDNGAKFLLDSLKEENFSGDFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 34/158 (21%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E+LD+L+ +RPTAVN+ + + L + + ++L + + + D+ +N
Sbjct: 97 ERLDWLLESRPTAVNLSNSLMEIGHLLD---ASDDLTKFNSKLFNYVCDLSDDDLKNNIK 153
Query: 222 IGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH----------G 268
+G NGA+ L+D VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 154 LGDNGAKFLLDSLKEENFSGDFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAKGNVDS 213
Query: 269 ANKIGA------------------AYCTETRPYNQGAR 288
A + G Y ETRPYNQG+R
Sbjct: 214 ATETGEPSQKKAKKLVDVKASLKHVYPLETRPYNQGSR 251
>gi|255714855|ref|XP_002553709.1| KLTH0E05236p [Lachancea thermotolerans]
gi|313471361|sp|C5DHL1.1|MTNA_LACTC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238935091|emb|CAR23272.1| KLTH0E05236p [Lachancea thermotolerans CBS 6340]
Length = 417
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 97/200 (48%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I +++ S+++LDQLLLP+T+K V I ++D Y I +MQVRGAPAIAIVG
Sbjct: 2 SLEAIQFDRSHRDDISVRVLDQLLLPYTTKYVPIYTIDDGYTVINTMQVRGAPAIAIVGA 61
Query: 58 LGLVVDI---------KDKQFPDNELIQLIESML-------------------------- 82
L ++++I + + F D +L S L
Sbjct: 62 LAVLMEIQLLQNDGFARTQTFYDISSFELTRSALSQRLDFLLSSRPTAVNLSNALREIRV 121
Query: 83 -----------------------EKDISDNKAIGRNGAQALIDLNPRV---SKLNVLTHC 116
++D+++N +G NGA L+D + VLT C
Sbjct: 122 LLAQSAGLAAFGNGVYDFVCRLIDEDLTNNVKMGDNGAAFLLDALQQEGFDEDFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGV+RSL
Sbjct: 182 NTGSLATSGYGTALGVVRSL 201
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 90/171 (52%), Gaps = 31/171 (18%)
Query: 146 KDKQFPDNDSLE---KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKT 202
+ + F D S E + ++LD+L+S+RPTAVN+ A ++ L A+++ +
Sbjct: 78 RTQTFYDISSFELTRSALSQRLDFLLSSRPTAVNLSNALREIRVLL---AQSAGLAAFGN 134
Query: 203 RLIQLIESMLEKDISDNKAIGRNGAQALIDL--NPGVSK-LNVLTHCNTGSLATAEYGTA 259
+ + ++++D+++N +G NGA L+D G + VLT CNTGSLAT+ YGTA
Sbjct: 135 GVYDFVCRLIDEDLTNNVKMGDNGAAFLLDALQQEGFDEDFAVLTICNTGSLATSGYGTA 194
Query: 260 LGVIRSL----------------------HGANKIGAAYCTETRPYNQGAR 288
LGV+RSL G K+ Y ETRPYNQGAR
Sbjct: 195 LGVVRSLWNDSLAKSQAPGDGSAKKRKLNQGRAKMVQVYPLETRPYNQGAR 245
>gi|365982067|ref|XP_003667867.1| hypothetical protein NDAI_0A04680 [Naumovozyma dairenensis CBS 421]
gi|343766633|emb|CCD22624.1| hypothetical protein NDAI_0A04680 [Naumovozyma dairenensis CBS 421]
Length = 415
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 27/151 (17%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
++L +L+S+RPTAVN+ A + ++L+ K+ + L + ++ ++ D+S+NK
Sbjct: 97 DRLAFLLSSRPTAVNLSNALKEISTTLN---KSDNIKAFDRSLFEFVKRLINDDLSNNKK 153
Query: 222 IGRNGAQALIDL--NPGVS-KLNVLTHCNTGSLATAEYGTALGVIRSL------------ 266
+G NGA+ L+D G + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 154 MGDNGAKFLLDTLEKEGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWEDSKTKSYPTN 213
Query: 267 ---------HGANKIGAAYCTETRPYNQGAR 288
+ +K+ Y ETRPYNQG+R
Sbjct: 214 IKKKAKTTENSQSKMVHVYPLETRPYNQGSR 244
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 54/68 (79%), Gaps = 5/68 (7%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I + K ++++LDQLLLP+T+K + I++++D Y+ IK+MQVRGAPAIAIVG
Sbjct: 2 SLEAIKFNKSNPANVTVEVLDQLLLPYTTKYIPIHSIDDGYRVIKTMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK 65
L ++++I+
Sbjct: 62 LSVLLEIQ 69
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV---SKLNVLTHCNTGSLATAEYG 127
D L + ++ ++ D+S+NK +G NGA+ L+D + + VLT CNTGSLAT+ YG
Sbjct: 133 DRSLFEFVKRLINDDLSNNKKMGDNGAKFLLDTLEKEGFKDEFAVLTICNTGSLATSGYG 192
Query: 128 TALGVIRSLHGANKIVDIKDKQFPDN 153
TALGVIRSL D K K +P N
Sbjct: 193 TALGVIRSLWE-----DSKTKSYPTN 213
>gi|365757851|gb|EHM99723.1| YPR118W-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 411
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S++K V EKLD+L+S+RPTAVN+ + +K+ L ++ + L + +++
Sbjct: 89 ESIKKMVNEKLDFLLSSRPTAVNLSNSLAEIKNILKS---SNDLEVFDRDLYSYVCKLVD 145
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH--- 267
D+++N +G NGA+ L+++ + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 DDLANNMRMGDNGAKYLVNMLEKDGFKGAFAVLTICNTGSLATSGYGTALGVIRSLWKDS 205
Query: 268 ---------GAN-----KIGAAYCTETRPYNQGAR 288
G+N K+ + ETRPYNQG+R
Sbjct: 206 LAKTQKVRSGSNDEKHPKMDHVFPLETRPYNQGSR 240
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 3 SLQSIIY-----EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I + E+ S+KILDQLLLP+T+K V I+ +ED Y IK MQVRGAPAIAIVG
Sbjct: 2 SLEAISFNRSNPERVSVKILDQLLLPYTTKFVPIHTIEDGYSVIKKMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK 65
L ++ +++
Sbjct: 62 LSVLTEVQ 69
>gi|297617460|ref|YP_003702619.1| translation initiation factor, aIF-2BI family [Syntrophothermus
lipocalidus DSM 12680]
gi|297145297|gb|ADI02054.1| translation initiation factor, aIF-2BI family [Syntrophothermus
lipocalidus DSM 12680]
Length = 342
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG AL D PD D + + E D L S RPTAVN+ A +
Sbjct: 52 TAAYGVALAAWGF-----------DGPEPDFD---RRMQEVFDLLASTRPTAVNLFWALN 97
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+K +E +A V L+Q E M +D++ N+A+G G + ++ +
Sbjct: 98 RMKKVYTE-HRAQGREQVAVALLQEAEEMFAEDVATNQAMGDFGEKLF------APRVTL 150
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LT CN GSLAT YGTALGVIRS H K+ Y ETRP QGAR
Sbjct: 151 LTVCNAGSLATCGYGTALGVIRSCHREGKLAMVYACETRPVLQGAR 196
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 80/186 (43%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ +++ L +LDQ LP T + E+ QAI+ + VRGAP I + G+ +
Sbjct: 1 MKTVYWQEGVLYLLDQTALPGTVRYQACREAEEVAQAIRDLVVRGAPLIGVTAAYGVALA 60
Query: 64 IK--DKQFPDNE---------------------------------------------LIQ 76
D PD + L+Q
Sbjct: 61 AWGFDGPEPDFDRRMQEVFDLLASTRPTAVNLFWALNRMKKVYTEHRAQGREQVAVALLQ 120
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E M +D++ N+A+G G + PRV+ +LT CN GSLAT YGTALGVIRS
Sbjct: 121 EAEEMFAEDVATNQAMGDFGEKLF---APRVT---LLTVCNAGSLATCGYGTALGVIRSC 174
Query: 137 HGANKI 142
H K+
Sbjct: 175 HREGKL 180
>gi|409080331|gb|EKM80691.1| hypothetical protein AGABI1DRAFT_71165 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 385
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 92/148 (62%), Gaps = 9/148 (6%)
Query: 149 QFPDNDSLEK-YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEW--AKASPVNTVKTRLI 205
QF + +L K ++ E L +L +RPTAVN+ A + L+E A+ S + V+ ++
Sbjct: 77 QFLTSIALFKSHIEETLAHLYESRPTAVNLGAATRRLMQVLNEGVAAEKSISDIVQDLMV 136
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDL----NPGVSK-LNVLTHCNTGSLATAEYGTAL 260
+ I ++ +D+ NKA+ + G L+DL N S+ LNVLT CNTGSLAT+ YGTAL
Sbjct: 137 EGI-AIAGEDVGRNKAMAQWGGDWLVDLVTKKNGAPSEGLNVLTVCNTGSLATSGYGTAL 195
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+I LH K+G AY T+T PY+QG+R
Sbjct: 196 GLITYLHDTGKLGKAYFTQTAPYHQGSR 223
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 96/202 (47%), Gaps = 63/202 (31%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
+ SI + + + I++QLLLPH ++ V+IN++EDA+ AI+SM++RGAPAIA + L +V
Sbjct: 6 ISSIKVDGNQITIINQLLLPHVTEYVEINSIEDAFDAIRSMKIRGAPAIASLAALSVVQH 65
Query: 62 VDIKDKQFPDNEL---IQLIESMLE----------------------------------- 83
+D + P + I L +S +E
Sbjct: 66 LDRTRRADPQPQFLTSIALFKSHIEETLAHLYESRPTAVNLGAATRRLMQVLNEGVAAEK 125
Query: 84 ------------------KDISDNKAIGRNGAQALIDLNPR-----VSKLNVLTHCNTGS 120
+D+ NKA+ + G L+DL + LNVLT CNTGS
Sbjct: 126 SISDIVQDLMVEGIAIAGEDVGRNKAMAQWGGDWLVDLVTKKNGAPSEGLNVLTVCNTGS 185
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALG+I LH K+
Sbjct: 186 LATSGYGTALGLITYLHDTGKL 207
>gi|402224152|gb|EJU04215.1| Methylthioribose-1-phosphate isomerase [Dacryopinax sp. DJM-731
SS1]
Length = 384
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 90/143 (62%), Gaps = 11/143 (7%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES--ML 212
+L ++ LD+L+++RPTAVN+ +A ++S S+ +A ++ T L + ES +
Sbjct: 79 ALSSHLSPILDHLLTSRPTAVNLSQAITRIRSVFSK-GEAQLLSGGDTALAVIAESRAVA 137
Query: 213 EKDISDNKAIGRNGAQALIDL-------NPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
++D+ NKA+ R GA+ ++ + PG +NVLT CNTGSLAT+ YGTALG+I
Sbjct: 138 DEDVGRNKAMSRLGAEWVLAMLEAEGTVAPG-EPINVLTVCNTGSLATSGYGTALGLITH 196
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
LH ++G A+ T++ PY+QG R
Sbjct: 197 LHEQGRLGRAFYTQSAPYHQGTR 219
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 88/198 (44%), Gaps = 64/198 (32%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ SI ++I+DQLLLPH + V + EDAY AIKSM++RGAPAIA + L +
Sbjct: 1 MTSIRTNGDEIEIVDQLLLPHVVRWVPVLTPEDAYDAIKSMKIRGAPAIASLAALSIARY 60
Query: 64 IK---DKQFPDNEL------------------------------IQLIESMLEKD----- 85
I P + L I I S+ K
Sbjct: 61 ISLALSASPPPSWLSTPAALSSHLSPILDHLLTSRPTAVNLSQAITRIRSVFSKGEAQLL 120
Query: 86 ---------ISDNKA-----IGRNGAQ---------ALIDLNPRVS---KLNVLTHCNTG 119
I++++A +GRN A A+++ V+ +NVLT CNTG
Sbjct: 121 SGGDTALAVIAESRAVADEDVGRNKAMSRLGAEWVLAMLEAEGTVAPGEPINVLTVCNTG 180
Query: 120 SLATAEYGTALGVIRSLH 137
SLAT+ YGTALG+I LH
Sbjct: 181 SLATSGYGTALGLITHLH 198
>gi|312898687|ref|ZP_07758077.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera
micronuciformis F0359]
gi|310620606|gb|EFQ04176.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera
micronuciformis F0359]
Length = 350
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ARPTAVN+ + + + E AS V T+ L + + +D+ NK IGR G
Sbjct: 81 LDKARPTAVNLHWGLERMNQVIQEHRDAS-VETLIEALEDEAKFIYAEDVDVNKCIGRFG 139
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ALI K VLTHCN G+LATA+ GTALGVIR+LHG +I + ETRP QG
Sbjct: 140 AEALI-ARIRKDKFTVLTHCNAGALATADIGTALGVIRNLHGKGRIANVFADETRPLLQG 198
Query: 287 AR 288
AR
Sbjct: 199 AR 200
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 109/231 (47%), Gaps = 62/231 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC------ 57
++++ +EK++L +LDQ LP + + ++ +AIK + VRGAPAI +
Sbjct: 1 MKTLTWEKNTLILLDQTKLPTQEEYLQCSSWRQVEEAIKVLAVRGAPAIGVAAAYAVVLA 60
Query: 58 -------------LGLVVDIKDKQFPD-----------NELIQ-----LIESMLE----- 83
L V+ DK P N++IQ +E+++E
Sbjct: 61 ALELKKETDFRQKLVDVIITLDKARPTAVNLHWGLERMNQVIQEHRDASVETLIEALEDE 120
Query: 84 ------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+D+ NK IGR GA+ALI R K VLTHCN G+LATA+ GTALGVIR+LH
Sbjct: 121 AKFIYAEDVDVNKCIGRFGAEALI-ARIRKDKFTVLTHCNAGALATADIGTALGVIRNLH 179
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
G +I ++ + E L AR TA ++ AD + +L
Sbjct: 180 GKGRIANV-------------FADETRPLLQGARLTATELQ--ADKIPVTL 215
>gi|418721073|ref|ZP_13280261.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. UI 09149]
gi|421092761|ref|ZP_15553490.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. 200801926]
gi|410364350|gb|EKP15374.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. 200801926]
gi|410742552|gb|EKQ91300.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. UI 09149]
gi|456890503|gb|EMG01317.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. 200701203]
Length = 413
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 57 LKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 116
Query: 60 -------------------------------LVVDIKDKQFPDNE-----LIQLIES--- 80
LV++ +FP+ + L ++ +S
Sbjct: 117 LNGLSSQPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEE 176
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 177 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 233
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 234 RDA-------------GHSLTVFADETRPYLQGARLTAWELK 262
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNK 220
KLD L+ +RPTAVN++ + S E A S N K + + MLE+D+ +N
Sbjct: 132 KLDELLESRPTAVNLRLVIEEFFSRFPE-ADYSSANLEKMQKSAEEFALFMLEEDLENNL 190
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ET
Sbjct: 191 TLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADET 247
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 248 RPYLQGAR 255
>gi|418735072|ref|ZP_13291484.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|410749328|gb|EKR02220.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
Length = 413
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 57 LKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 116
Query: 60 -------------------------------LVVDIKDKQFPDNE-----LIQLIES--- 80
LV++ +FP+ + L ++ +S
Sbjct: 117 LNGLSSKPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEE 176
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 177 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 233
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 234 RDA-------------GHSLTVFADETRPYLQGARLTAWELK 262
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNK 220
KLD L+ +RPTAVN++ + S E A S N K + + MLE+D+ +N
Sbjct: 132 KLDELLESRPTAVNLRLVIEEFFSRFPE-ADYSSANLEKMQKSAEEFALFMLEEDLENNL 190
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ET
Sbjct: 191 TLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADET 247
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 248 RPYLQGAR 255
>gi|299751092|ref|XP_001830048.2| translation initiation factor 2B subunit I family protein
[Coprinopsis cinerea okayama7#130]
gi|298409216|gb|EAU91713.2| translation initiation factor 2B subunit I family protein
[Coprinopsis cinerea okayama7#130]
Length = 397
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 90/140 (64%), Gaps = 9/140 (6%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNM----KRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+++ +V LDYL+++RPTAVN+ KR + + S++ A +P + V + LI+ +
Sbjct: 83 AIKNHVQPLLDYLLTSRPTAVNLGNATKRLSKLIDDSIA--ANEAPKSIVHS-LIEDAKL 139
Query: 211 MLEKDISDNKAIGRNGAQALID-LNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ ++D+ NKA+ + G LI + P K LNVLT CNTGSLAT+ YGTALG+I LH
Sbjct: 140 IADEDVGRNKAMAKWGGDWLIKRVQPSTPKSLNVLTVCNTGSLATSGYGTALGLITYLHE 199
Query: 269 ANKIGAAYCTETRPYNQGAR 288
++ A+ T+T PY+QG+R
Sbjct: 200 VGQLNKAHFTQTTPYHQGSR 219
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 94/189 (49%), Gaps = 60/189 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD--KQFPD 71
++I+DQLLLPH +K V+I+++E+A++AIKSM++RGAPAIA + L L + +Q P+
Sbjct: 15 IEIVDQLLLPHVTKFVEISSIEEAHEAIKSMKIRGAPAIASLASLSLAQYLTRALRQTPE 74
Query: 72 NELI-------------------------------------------------QLIESML 82
E + ++ S++
Sbjct: 75 PEFLASGQAIKNHVQPLLDYLLTSRPTAVNLGNATKRLSKLIDDSIAANEAPKSIVHSLI 134
Query: 83 E-------KDISDNKAIGRNGAQALID-LNPRVSK-LNVLTHCNTGSLATAEYGTALGVI 133
E +D+ NKA+ + G LI + P K LNVLT CNTGSLAT+ YGTALG+I
Sbjct: 135 EDAKLIADEDVGRNKAMAKWGGDWLIKRVQPSTPKSLNVLTVCNTGSLATSGYGTALGLI 194
Query: 134 RSLHGANKI 142
LH ++
Sbjct: 195 TYLHEVGQL 203
>gi|116620607|ref|YP_822763.1| translation initiation factor 2B subunit I [Candidatus Solibacter
usitatus Ellin6076]
gi|123125062|sp|Q028S4.1|MTNA_SOLUE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|116223769|gb|ABJ82478.1| translation initiation factor 2B subunit I family (IF-2BI)
[Candidatus Solibacter usitatus Ellin6076]
Length = 343
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L RPTAVN+ A D +K L + P+ +++RLI + + E+DI+ N+AIGR
Sbjct: 79 ETLAKTRPTAVNLFWAIDRMKR-LYGSMRGRPLEEIRSRLIAEAQIVREEDIAINRAIGR 137
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
NGA + D VLTHCN G+LATA YGTALGVIR+ + K + ETRP+
Sbjct: 138 NGAALVPDGK------TVLTHCNAGALATAGYGTALGVIRAAIESGKKIDVFADETRPFL 191
Query: 285 QGAR 288
QGAR
Sbjct: 192 QGAR 195
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 66/230 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I + + ++DQ LP + V N E+ AI+ M +RGAPAI + +G+ +
Sbjct: 2 VETIEWTPGGVVMIDQTRLPLHEEYVTCRNYEEVATAIRDMIIRGAPAIGVAAAMGVAIG 61
Query: 64 IK-------DKQF----------------------------------PDNE----LIQLI 78
++ D Q P E LI
Sbjct: 62 VQHAGDGDLDGQVDLICETLAKTRPTAVNLFWAIDRMKRLYGSMRGRPLEEIRSRLIAEA 121
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+ + E+DI+ N+AIGRNGA + D VLTHCN G+LATA YGTALGVIR+
Sbjct: 122 QIVREEDIAINRAIGRNGAALVPDGK------TVLTHCNAGALATAGYGTALGVIRAAIE 175
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ K +D+ F D E +L AR T +++ DS+ ++L
Sbjct: 176 SGKKIDV----FAD---------ETRPFLQGARLTVWELQQ--DSIPTTL 210
>gi|116327766|ref|YP_797486.1| translation initiation factor 2B [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331574|ref|YP_801292.1| translation initiation factor 2B [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122280681|sp|Q04RD6.1|MTNA_LEPBJ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|122284438|sp|Q053E2.1|MTNA_LEPBL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|116120510|gb|ABJ78553.1| Translation initiation factor 2B [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116125263|gb|ABJ76534.1| Translation initiation factor 2B [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 362
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 65
Query: 60 -------------------------------LVVDIKDKQFPDNE-----LIQLIES--- 80
LV++ +FP+ + L ++ +S
Sbjct: 66 LNGLSSQPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEE 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELK 211
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 77/128 (60%), Gaps = 6/128 (4%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNK 220
KLD L+ +RPTAVN++ + S E A S N K + + MLE+D+ +N
Sbjct: 81 KLDELLESRPTAVNLRLVIEEFFSRFPE-ADYSSANLEKMQKSAEEFALFMLEEDLENNL 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ET
Sbjct: 140 TLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADET 196
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 197 RPYLQGAR 204
>gi|426197231|gb|EKV47158.1| hypothetical protein AGABI2DRAFT_185156 [Agaricus bisporus var.
bisporus H97]
Length = 385
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 86/143 (60%), Gaps = 14/143 (9%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESMLE 213
+ ++ E L +L +RPTAVN+ A + L+E A S + V+ +++ I ++
Sbjct: 85 FKSHIEETLAHLYESRPTAVNLGAATRRLMQVLNEGVAADESISDIVQDLMVEGI-AIAG 143
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK--------LNVLTHCNTGSLATAEYGTALGVIRS 265
+D+ NKA+ + G L+DL V+K LNVLT CNTGSLAT+ YGTALG+I
Sbjct: 144 EDVGRNKAMAQWGGDWLVDL---VTKRDGTPSEGLNVLTVCNTGSLATSGYGTALGLITY 200
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
LH K+G AY T+T PY+QG+R
Sbjct: 201 LHDTGKLGKAYFTQTAPYHQGSR 223
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 98/205 (47%), Gaps = 69/205 (33%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
+ SI + + + I++QLLLPH ++ V+IN++EDA+ AI+SM++RGAPAIA + L +V
Sbjct: 6 ISSIKVDGNQITIINQLLLPHVTEYVEINSIEDAFDAIRSMRIRGAPAIASLAALSVVQH 65
Query: 62 VDIKDKQFPDNEL---IQLIESMLE----------------------------------- 83
+D + P + I L +S +E
Sbjct: 66 LDRTRRADPQPQFLTSIALFKSHIEETLAHLYESRPTAVNLGAATRRLMQVLNEGVAADE 125
Query: 84 ------------------KDISDNKAIGRNGAQALIDLNPRVSK--------LNVLTHCN 117
+D+ NKA+ + G L+DL V+K LNVLT CN
Sbjct: 126 SISDIVQDLMVEGIAIAGEDVGRNKAMAQWGGDWLVDL---VTKRDGTPSEGLNVLTVCN 182
Query: 118 TGSLATAEYGTALGVIRSLHGANKI 142
TGSLAT+ YGTALG+I LH K+
Sbjct: 183 TGSLATSGYGTALGLITYLHDTGKL 207
>gi|421098660|ref|ZP_15559324.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. 200901122]
gi|410798290|gb|EKS00386.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira
borgpetersenii str. 200901122]
Length = 362
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 103/222 (46%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I++ L +LDQ LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWTNKELILLDQRALPGTTSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 65
Query: 60 -------------------------------LVVDIKDKQFPDNE-----LIQLIES--- 80
LV++ +FP+ + L ++ +S
Sbjct: 66 LNGLSSKPTFRELKIKLDELLESRPTAVNLRLVIEEFFSRFPETDYSSANLKKMQKSAEE 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELK 211
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDISDNKA 221
KLD L+ +RPTAVN++ + S E +S + ++ + MLE+D+ +N
Sbjct: 81 KLDELLESRPTAVNLRLVIEEFFSRFPETDYSSANLKKMQKSAEEFALFMLEEDLENNLT 140
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ETR
Sbjct: 141 LSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETR 197
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 198 PYLQGAR 204
>gi|398342217|ref|ZP_10526920.1| translation initiation factor 2B [Leptospira inadai serovar Lyme
str. 10]
Length = 359
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 114/247 (46%), Gaps = 72/247 (29%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
++L+ I +E L++LDQ L+P + + +D AI+ M VRGAPAIAI G G+V
Sbjct: 4 QNLRPIFWEGRILRLLDQRLIPGKKEWFLASTADDTILAIREMIVRGAPAIAITGLFGVV 63
Query: 62 VDIKDKQF---PDNELIQLIESML------------------------------------ 82
+++K +F P E ++LI S +
Sbjct: 64 LELK--KFDTKPSYESLELILSRILESRPTAVNLRTALDEFRKLLPKEKFESLSLNEIQN 121
Query: 83 ----------EKDISDNKAIGRNGAQALIDLNPRVS-KLNVLTHCNTGSLATAEYGTALG 131
E DI +N A+ NG + L P S K+ +LTHCNTG+LATA +GTALG
Sbjct: 122 IAEKFAIGVYEDDIRNNIALSNNG----LALFPNKSEKIKILTHCNTGALATAGHGTALG 177
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSL 188
VIRSLH +K + L Y E YL AR TA ++ DS + S+
Sbjct: 178 VIRSLH---------EKGY----DLTVYADETRPYLQGARLTAWELLEEGIDSYLITDSM 224
Query: 189 SEWAKAS 195
+ W A+
Sbjct: 225 AGWLMAT 231
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 10/140 (7%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLS-EWAKASPVNTVKTRLIQLIE 209
P +SLE L ++ +RPTAVN++ A D + L E ++ +N ++ +
Sbjct: 73 PSYESLELI----LSRILESRPTAVNLRTALDEFRKLLPKEKFESLSLNEIQNIAEKFAI 128
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVS-KLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ E DI +N A+ NG + L P S K+ +LTHCNTG+LATA +GTALGVIRSLH
Sbjct: 129 GVYEDDIRNNIALSNNG----LALFPNKSEKIKILTHCNTGALATAGHGTALGVIRSLHE 184
Query: 269 ANKIGAAYCTETRPYNQGAR 288
Y ETRPY QGAR
Sbjct: 185 KGYDLTVYADETRPYLQGAR 204
>gi|344303274|gb|EGW33548.1| hypothetical protein SPAPADRAFT_60886 [Spathaspora passalidarum
NRRL Y-27907]
Length = 405
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 55/191 (28%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+L++I +++ +K ILDQLLLP+++ + I ++ED +QAIK MQVRGAPAIAIVG
Sbjct: 6 KTLEAIKFDRKEIKLEILDQLLLPYSTTYIPIKSIEDGFQAIKLMQVRGAPAIAIVGAFA 65
Query: 60 LVVDI------KDKQFPDNELIQLIESML------------------------------- 82
+VVD P ELI+ I+ ++
Sbjct: 66 VVVDTYIYLQAATSNRPIGELIKSIDYLITSRPTAVNLANALNDMKTLIVETECENVNEK 125
Query: 83 -------------EKDISDNKAIGRNGAQALID-LNPRVSK--LNVLTHCNTGSLATAEY 126
+ D+++N IG +G + + D L + K +++T CNTGSLAT+ +
Sbjct: 126 VYRALLHYATALYDDDLANNIKIGYHGYKYISDTLKQQNFKGPFSIITICNTGSLATSGH 185
Query: 127 GTALGVIRSLH 137
GTALG+IRS +
Sbjct: 186 GTALGIIRSTY 196
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 12/137 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
+DYL+++RPTAVN+ A + +K+ + E + V L+ ++ + D+++N IG
Sbjct: 90 IDYLITSRPTAVNLANALNDMKTLIVETECENVNEKVYRALLHYATALYDDDLANNIKIG 149
Query: 224 RNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH------GANK--- 271
+G + + D +++T CNTGSLAT+ +GTALG+IRS + +N+
Sbjct: 150 YHGYKYISDTLKQQNFKGPFSIITICNTGSLATSGHGTALGIIRSTYQSLSKENSNEEFY 209
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 210 LQHVYPCETRPYNQGAK 226
>gi|337286677|ref|YP_004626150.1| translation initiation factor, aIF-2BI family [Thermodesulfatator
indicus DSM 15286]
gi|335359505|gb|AEH45186.1| translation initiation factor, aIF-2BI family [Thermodesulfatator
indicus DSM 15286]
Length = 354
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 66/223 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++ I+++ L++LDQ LLP K + + + +AIK M VRGAPAI I G +GLV+
Sbjct: 12 IRPILWDSRGLRLLDQRLLPWREKYLRLRTPREVKKAIKDMVVRGAPAIGITGAIGLVLG 71
Query: 63 --DIKDKQFPD----------------------------------------NELIQLIES 80
IK + D +E+++++ +
Sbjct: 72 AEKIKARSKRDFLAKLKRIGESLKKARPTAVNLSWAIDRLLQKANEADVSQDEIVEVLRA 131
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ E+DI NKA+GR GA+ + D + +LTHCN G+LAT YGTA+GVIR+
Sbjct: 132 EALKIWEEDIEANKAMGRLGAELIPD------EATILTHCNAGALATGGYGTAIGVIRAA 185
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
H A K + + E +L AR TA +K+
Sbjct: 186 HEAGKKIKV-------------LADETRPWLQGARLTAWELKK 215
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 88/162 (54%), Gaps = 22/162 (13%)
Query: 131 GVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE 190
G I + GA KI K + D + K +GE L ARPTAVN+ A D +
Sbjct: 64 GAIGLVLGAEKI---KARSKRDFLAKLKRIGESLK---KARPTAVNLSWAIDRLLQ---- 113
Query: 191 WAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHC 246
KA+ + + +++++ + + E+DI NKA+GR GA+ + D + +LTHC
Sbjct: 114 --KANEADVSQDEIVEVLRAEALKIWEEDIEANKAMGRLGAELIPD------EATILTHC 165
Query: 247 NTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
N G+LAT YGTA+GVIR+ H A K ETRP+ QGAR
Sbjct: 166 NAGALATGGYGTAIGVIRAAHEAGKKIKVLADETRPWLQGAR 207
>gi|410075061|ref|XP_003955113.1| hypothetical protein KAFR_0A05430 [Kazachstania africana CBS 2517]
gi|372461695|emb|CCF55978.1| hypothetical protein KAFR_0A05430 [Kazachstania africana CBS 2517]
Length = 414
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 24/148 (16%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E+L++L+S+RPTAVN+ A + S L + N+ + +L++D ++NK
Sbjct: 97 ERLEFLLSSRPTAVNLSNALKDISSILHNCEDLTSFNS---EVFDYTCKLLDEDSTNNKK 153
Query: 222 IGRNGAQALI---DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH----------- 267
+G NGA+ L+ ++ VLT CNTGSLATA YGTALGVIRSL
Sbjct: 154 MGDNGAEYLLKSLEMENFAEDFAVLTICNTGSLATAGYGTALGVIRSLWKDSVAKTDLSQ 213
Query: 268 -------GANKIGAAYCTETRPYNQGAR 288
G ++ Y ETRPYNQG+R
Sbjct: 214 SPKKIKSGKPRLAHVYPLETRPYNQGSR 241
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 101/200 (50%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SLQSII+EK +++LDQLLLP+TSK V I ++D Y IK+MQVRGAPAIA+VG
Sbjct: 2 SLQSIIFEKSDRTNVLVQVLDQLLLPYTSKYVPIYTIDDGYTVIKNMQVRGAPAIAMVGA 61
Query: 58 LGLVVD---IKDKQFPDNE--------------LIQLIESMLE------------KDIS- 87
L ++++ + +K F + L + +E +L KDIS
Sbjct: 62 LSVLLETQLLTNKNFTATQFFYDVSSWAPIRTRLTERLEFLLSSRPTAVNLSNALKDISS 121
Query: 88 ----------------------------DNKAIGRNGAQAL---IDLNPRVSKLNVLTHC 116
+NK +G NGA+ L +++ VLT C
Sbjct: 122 ILHNCEDLTSFNSEVFDYTCKLLDEDSTNNKKMGDNGAEYLLKSLEMENFAEDFAVLTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLATA YGTALGVIRSL
Sbjct: 182 NTGSLATAGYGTALGVIRSL 201
>gi|170092395|ref|XP_001877419.1| predicted protein [Laccaria bicolor S238N-H82]
gi|313471319|sp|B0D0U4.1|MTNA_LACBS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|164647278|gb|EDR11522.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 382
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 84/145 (57%), Gaps = 6/145 (4%)
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLI 208
F ++L+ + L YL +ARPTAVN+ A + ++L++ A+ ++ LI
Sbjct: 76 FASPEALKNNLEPVLAYLFTARPTAVNLGAATRRLTTTLNQSIAQGKTTRSIAQDLIDEG 135
Query: 209 ESMLEKDISDNKAIGRNGAQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
+++ ++D+ NKA+ + G L D LNVLT CNTGSLAT+ YGTALG+I
Sbjct: 136 KAIADEDVGRNKAMSKWGGDWLFDRVKAGGGSAEKGLNVLTVCNTGSLATSGYGTALGLI 195
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
LH K+ AY T+T PY+QG+R
Sbjct: 196 TYLHETGKLEKAYYTQTAPYHQGSR 220
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+L SI ++I++QLLLPH ++ V I+ +E A+ AIK+M++RGAPAIA + L
Sbjct: 2 ALISIRTSDDKIEIINQLLLPHVTEFVQIDTIEQAHDAIKTMKIRGAPAIASLAALSF 59
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 26/115 (22%)
Query: 73 ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK--------LNVLTHCNTGSLATA 124
+LI +++ ++D+ NKA+ + G L D RV LNVLT CNTGSLAT+
Sbjct: 130 DLIDEGKAIADEDVGRNKAMSKWGGDWLFD---RVKAGGGSAEKGLNVLTVCNTGSLATS 186
Query: 125 EYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNMK 178
YGTALG+I LH K LEK Y + Y +R TA+ +K
Sbjct: 187 GYGTALGLITYLHETGK--------------LEKAYYTQTAPYHQGSRLTALELK 227
>gi|359727361|ref|ZP_09266057.1| translation initiation factor 2B [Leptospira weilii str.
2006001855]
Length = 362
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 105/222 (47%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G+ +
Sbjct: 6 LKPILWTNKELILLDQRVLPGTTSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 65
Query: 63 -----------DIKDK-----------------------QFPDNE-----LIQLIES--- 80
++K K +FP + L ++ +S
Sbjct: 66 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLAIEEFFSRFPKTDYSSANLKEMQKSAEE 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFANETRPYLQGARLTAWELK 211
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSL--SEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
KLD L+ +RPTAVN++ A + S ++++ A+ + ++ + MLE+D+ +N
Sbjct: 81 KLDELLESRPTAVNLRLAIEEFFSRFPKTDYSSAN-LKEMQKSAEEFALFMLEEDLENNL 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ET
Sbjct: 140 TLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFANET 196
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 197 RPYLQGAR 204
>gi|195952970|ref|YP_002121260.1| translation initiation factor, aIF-2BI family [Hydrogenobaculum sp.
Y04AAS1]
gi|195932582|gb|ACG57282.1| translation initiation factor, aIF-2BI family [Hydrogenobaculum sp.
Y04AAS1]
Length = 328
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 83/172 (48%), Gaps = 36/172 (20%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M L+S ++ L ILDQ LPH + NVED AIK+M VRGAPAI V G
Sbjct: 1 MLELKSFYFKDDILYILDQRKLPHEEVYFEAKNVEDVAYAIKAMLVRGAPAIGCVAAYGF 60
Query: 61 VVDIKD------------------------------KQFPDNELIQLIESMLEKDISDNK 90
+ IKD F + +L++ +++ ++DI NK
Sbjct: 61 AIGIKDGLDVEKVYDILSNTRPTAVNLFWALNRTKEAYFENKDLLEEAKNIEQEDIEANK 120
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+ GA + + K VLTHCNTG+LATA GTALGVI+ L+ KI
Sbjct: 121 RMSEFGASLIKE------KSVVLTHCNTGALATAGVGTALGVIKELYKQGKI 166
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 16/124 (12%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A + K + E L++ +++ ++DI NK +
Sbjct: 75 DILSNTRPTAVNLFWALNRTKEAYFE----------NKDLLEEAKNIEQEDIEANKRMSE 124
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA + + K VLTHCNTG+LATA GTALGVI+ L+ KI ETRPY
Sbjct: 125 FGASLIKE------KSVVLTHCNTGALATAGVGTALGVIKELYKQGKIDYVLVDETRPYL 178
Query: 285 QGAR 288
QG+R
Sbjct: 179 QGSR 182
>gi|417782255|ref|ZP_12429988.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira weilii str.
2006001853]
gi|410777848|gb|EKR62493.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira weilii str.
2006001853]
Length = 362
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 105/222 (47%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G+ +
Sbjct: 6 LKPILWTNKELILLDQRVLPGTTSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIALY 65
Query: 63 -----------DIKDK-----------------------QFPDNE-----LIQLIES--- 80
++K K +FP + L ++ +S
Sbjct: 66 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLAIEEFFSRFPKTDYSSANLKEMQKSAEE 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
MLE+D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLEEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFANETRPYLQGARLTAWELK 211
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 6/128 (4%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSL--SEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
KLD L+ +RPTAVN++ A + S ++++ A+ + ++ + MLE+D+ +N
Sbjct: 81 KLDELLESRPTAVNLRLAIEEFFSRFPKTDYSSAN-LKEMQKSAEEFALFMLEEDLENNL 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ET
Sbjct: 140 TLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFANET 196
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 197 RPYLQGAR 204
>gi|408791828|ref|ZP_11203438.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408463238|gb|EKJ86963.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 357
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 61/215 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
I ++ L++LDQ +LP + + I +VE+ AI+ M VRGAPAIAI G GL + K
Sbjct: 9 IQWKSTHLELLDQRILPGKKEFLKIVSVEETILAIREMAVRGAPAIAITGVFGLTLGAKS 68
Query: 67 K------QFPDNELIQLIES-------------------------------------MLE 83
+ + D+ L ++ES M++
Sbjct: 69 RVGVASSKDIDSLLTSVLESRPTAVNLSYAIREAKNRIQGITDWSLITEVWESYGKEMVK 128
Query: 84 KDISDNKAIGRNGAQALIDLNPR-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
D+S N+A+G NG + L P+ S+ +++THCNTG+LATA +GTALGVIRSL A K
Sbjct: 129 LDLSANRALGENG----LSLFPKDQSEYHIITHCNTGALATAGHGTALGVIRSLRDAGKK 184
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
V + Y E +L +R TA M
Sbjct: 185 VIV-------------YADETRPFLQGSRLTAFEM 206
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 77/129 (59%), Gaps = 14/129 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKS---SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
L ++ +RPTAVN+ A K+ +++W+ + V + M++ D+S N+
Sbjct: 82 LTSVLESRPTAVNLSYAIREAKNRIQGITDWSLITEVWESYGK------EMVKLDLSANR 135
Query: 221 AIGRNGAQALIDLNP-GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
A+G NG + L P S+ +++THCNTG+LATA +GTALGVIRSL A K Y E
Sbjct: 136 ALGENG----LSLFPKDQSEYHIITHCNTGALATAGHGTALGVIRSLRDAGKKVIVYADE 191
Query: 280 TRPYNQGAR 288
TRP+ QG+R
Sbjct: 192 TRPFLQGSR 200
>gi|333983430|ref|YP_004512640.1| methylthioribose-1-phosphate isomerase [Methylomonas methanica
MC09]
gi|333807471|gb|AEG00141.1| Methylthioribose-1-phosphate isomerase [Methylomonas methanica
MC09]
Length = 345
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 12/141 (8%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
+ +P D+ + V + + L ++RPTAVN+ A D ++ L+E + A P+ L QL
Sbjct: 71 RHYP-ADNWQDSVEKDIQQLAASRPTAVNLFWALDKMRRRLNE-SNADPI----AELTQL 124
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+ + +DI+ N A+G GA L D VLTHCN G+LAT YGTALGVIRS +
Sbjct: 125 AQQIHAEDIAANHAMGEFGADILGDAKA------VLTHCNAGALATGGYGTALGVIRSAY 178
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ Y ETRP+ QGAR
Sbjct: 179 KRGHLQNVYADETRPWLQGAR 199
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 97/228 (42%), Gaps = 63/228 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+Q++ + SL +LDQ LLP D + +AI SM+VRGAPAI I G+++
Sbjct: 8 SVQALQWNGRSLSVLDQRLLPEKIAYDDYQDAAGVAEAIASMRVRGAPAIGIAAAYGVLL 67
Query: 63 DI--------------KDKQ------------F----------------PDNELIQLIES 80
KD Q F P EL QL +
Sbjct: 68 SAMRHYPADNWQDSVEKDIQQLAASRPTAVNLFWALDKMRRRLNESNADPIAELTQLAQQ 127
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+ +DI+ N A+G GA L D VLTHCN G+LAT YGTALGVIRS +
Sbjct: 128 IHAEDIAANHAMGEFGADILGDAKA------VLTHCNAGALATGGYGTALGVIRSAYKRG 181
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ ++ Y E +L AR T + A D + ++L
Sbjct: 182 HLQNV-------------YADETRPWLQGARLTVWEL--AQDGIPATL 214
>gi|242221826|ref|XP_002476653.1| eukaryotic translation initiation factor 2B [Postia placenta
Mad-698-R]
gi|220724084|gb|EED78156.1| eukaryotic translation initiation factor 2B [Postia placenta
Mad-698-R]
Length = 369
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLE 213
+L+++V L Y+ +ARPTAVN+ A + + L + +A + LI+ + + E
Sbjct: 82 TLQEHVAGHLSYIYTARPTAVNLGAATRRLSNILEQSVRAGKDARAIAEDLIREGKEIDE 141
Query: 214 KDISDNKAIGRNGAQALID--LNPGVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+D+ NK + R+GA+ L++ G+S LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 142 EDVGRNKQMSRHGAEWLLEQWAAKGLSGSNLNVMTVCNTGSLATSGYGTALGLITYLHET 201
Query: 270 NKIGAAYCTETRPYNQGAR 288
++ A+ T++ PY+QG+R
Sbjct: 202 GRLQRAFYTQSTPYHQGSR 220
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M L SI + ++I++QLLLPHT++ ++I+ +E A+ AIKSM++RGAPAIA + L
Sbjct: 1 MPGLTSIRTSEGKIEIVNQLLLPHTTEFIEISTIEQAHDAIKSMKIRGAPAIASLAAL 58
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 65 KDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDL----NPRVSKLNVLTHCNTGS 120
KD + +LI+ + + E+D+ NK + R+GA+ L++ S LNV+T CNTGS
Sbjct: 123 KDARAIAEDLIREGKEIDEEDVGRNKQMSRHGAEWLLEQWAAKGLSGSNLNVMTVCNTGS 182
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALG+I LH ++
Sbjct: 183 LATSGYGTALGLITYLHETGRL 204
>gi|398333507|ref|ZP_10518212.1| translation initiation factor 2B [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 332
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLEKDISDNKA 221
KLD L+ +RPTAVN++ + S E +S + ++ + MLE+D+ +N
Sbjct: 51 KLDELLESRPTAVNLRLVIEEFVSRFPETDYSSANLKKMQKSAEEFALFMLEEDLENNLT 110
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ETR
Sbjct: 111 LSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFANETR 167
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 168 PYLQGAR 174
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 88/193 (45%), Gaps = 63/193 (32%)
Query: 33 NVEDAYQAIKSMQVRGAPAIAIVGCLG--------------------------------- 59
+ED AI+ M VRGAPAIAI G G
Sbjct: 5 TLEDCIFAIREMVVRGAPAIAITGAFGIALYLNGLSSKPTFSELKIKLDELLESRPTAVN 64
Query: 60 --LVVDIKDKQFPDNE-----LIQLIES-------MLEKDISDNKAIGRNGAQALIDLNP 105
LV++ +FP+ + L ++ +S MLE+D+ +N + +N A +L +P
Sbjct: 65 LRLVIEEFVSRFPETDYSSANLKKMQKSAEEFALFMLEEDLENNLTLSKN-ALSLFPKSP 123
Query: 106 RVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLD 165
S LN++THCNTG+LATA +GTALGVIRSL A SL + E
Sbjct: 124 --SSLNIITHCNTGALATAGHGTALGVIRSLRDAGH-------------SLTVFANETRP 168
Query: 166 YLVSARPTAVNMK 178
YL AR TA +K
Sbjct: 169 YLQGARLTAWELK 181
>gi|313673888|ref|YP_004051999.1| methylthioribose-1-phosphate isomerase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940644|gb|ADR19836.1| methylthioribose-1-phosphate isomerase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 327
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 97/201 (48%), Gaps = 49/201 (24%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD--- 63
II+E L +LDQ LP V+ ++ D +AIK M VRGAPAI + G V+
Sbjct: 5 IIWENDKLLLLDQRQLPFKKIYVECCSIYDVAKAIKDMVVRGAPAIGVAAAYGFVLGKIN 64
Query: 64 -IKDK-------------------------QFPD-NELIQLIESMLEKDISDNKAIGRNG 96
I D+ Q+ D +L++L + + E+DIS NK IG+NG
Sbjct: 65 GIDDETIYNILINTRPTAVNLEWALQRCLNQYKDYGDLLELAKKIHEEDISINKQIGKNG 124
Query: 97 AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSL 156
+ LI+ + N+LTHCN G+LAT YGTALGVIR+ F + +
Sbjct: 125 KE-LIN-----NGENILTHCNAGALATGGYGTALGVIRA-------------AFEEGKRI 165
Query: 157 EKYVGEKLDYLVSARPTAVNM 177
YV E YL AR TA +
Sbjct: 166 HVYVDETRPYLQGARLTAYEL 186
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 20/124 (16%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR--LIQLIESMLEKDISDNKAIGR 224
L++ RPTAVN+ EWA +N K L++L + + E+DIS NK IG+
Sbjct: 75 LINTRPTAVNL------------EWALQRCLNQYKDYGDLLELAKKIHEEDISINKQIGK 122
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
NG + + N G N+LTHCN G+LAT YGTALGVIR+ K Y ETRPY
Sbjct: 123 NGKELI---NNGE---NILTHCNAGALATGGYGTALGVIRAAFEEGKRIHVYVDETRPYL 176
Query: 285 QGAR 288
QGAR
Sbjct: 177 QGAR 180
>gi|422002187|ref|ZP_16349425.1| translation initiation factor 2B [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417259119|gb|EKT88498.1| translation initiation factor 2B [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 385
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 16/133 (12%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES-------MLEKD 215
KLD L+ +RPTAVN++ A + S E N + L Q+ +S ML++D
Sbjct: 104 KLDELLESRPTAVNLRLAIEEFSSRFPE------ENYSSSNLEQMRKSAEDFALFMLKED 157
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A
Sbjct: 158 LENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTV 214
Query: 276 YCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 215 FADETRPYLQGAR 227
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I++ L +LDQ +LP + + +ED AI+ M VRGAPAIAI G G+V+
Sbjct: 29 LKPILWTNKELILLDQRVLPGITSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIVLY 88
Query: 63 -----------DIKDK-----------------------QFPD-----NELIQLIES--- 80
++K K +FP+ + L Q+ +S
Sbjct: 89 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLAIEEFSSRFPEENYSSSNLEQMRKSAED 148
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
ML++D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 149 FALFMLKEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 205
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 206 RDAGH-------------SLTVFADETRPYLQGARLTAWELK 234
>gi|269126206|ref|YP_003299576.1| translation initiation factor, aIF-2BI family [Thermomonospora
curvata DSM 43183]
gi|268311164|gb|ACY97538.1| translation initiation factor, aIF-2BI family [Thermomonospora
curvata DSM 43183]
Length = 345
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 93/288 (32%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M LQ++ + +L+++DQ LLPH ++ +++R
Sbjct: 1 MTELQAVSWTGDALRLIDQTLLPHR---------------LEHLEIR------------- 32
Query: 61 VVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGS 120
E+ L+++++ + A+G GA
Sbjct: 33 ------------EVDALVDAIVRLAVRGAPALGVAGA----------------------- 57
Query: 121 LATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
YG AL ++++ +++ D LE L+ + +ARPTAVN+
Sbjct: 58 -----YGVALAMLQA-----------EREGWDRARLEA----ALERIRTARPTAVNLAGG 97
Query: 181 ADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKL 240
D V+ V+ +++ +LE+D++ N+AIG +GAQ + P L
Sbjct: 98 VDRVRPL---------VDAGLAAVLEEAGRVLEEDVAANRAIGVHGAQWICARVP-RRPL 147
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCNTG+LATA +GTALGV+R LH + Y ETRP QG+R
Sbjct: 148 RILTHCNTGALATAGWGTALGVVRELHARGLVEVVYADETRPLLQGSR 195
>gi|11497982|ref|NP_069206.1| translation initiation factor IF-2B subunit alpha [Archaeoglobus
fulgidus DSM 4304]
gi|3182987|sp|O29877.1|MTNA_ARCFU RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|2650263|gb|AAB90865.1| translation initiation factor eIF-2B, subunit delta (eif2BD)
[Archaeoglobus fulgidus DSM 4304]
Length = 339
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI---VDIKDKQFPDNDSL 156
LID KL V+ N LA A A+ +L A + ++++F D D L
Sbjct: 12 LIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIALAAREREFADVDEL 71
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
++++ + D+L S RPTAVN+ ++ +L+ K V VK ++ E + E+D+
Sbjct: 72 KEHLKKAADFLASTRPTAVNL---FVGIERALNAALKGESVEEVKELALREAEKLAEEDV 128
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+ +G GA+ L D + VLT+CN G LAT ++GTALGV+RS K
Sbjct: 129 ERNRKMGEYGAELLEDGD------VVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVI 182
Query: 277 CTETRPYNQGAR 288
ETRP NQG+R
Sbjct: 183 ACETRPLNQGSR 194
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 85/178 (47%), Gaps = 53/178 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++SI ++ LK++DQ LP ++++ NVE+ AIK + VRGAPA+ G G+ +
Sbjct: 1 MRSIFWD-DGLKLIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIALA 59
Query: 64 IKDKQFPD-NEL---------------------------------------------IQL 77
++++F D +EL ++
Sbjct: 60 AREREFADVDELKEHLKKAADFLASTRPTAVNLFVGIERALNAALKGESVEEVKELALRE 119
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E + E+D+ N+ +G GA+ L D + VLT+CN G LAT ++GTALGV+RS
Sbjct: 120 AEKLAEEDVERNRKMGEYGAELLEDGD------VVLTYCNAGRLATVDWGTALGVVRS 171
>gi|410451726|ref|ZP_11305728.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira sp. Fiocruz
LV3954]
gi|418744167|ref|ZP_13300523.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. CBC379]
gi|418752846|ref|ZP_13309103.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. MOR084]
gi|421111580|ref|ZP_15572054.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. JET]
gi|409966798|gb|EKO34638.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. MOR084]
gi|410014492|gb|EKO76622.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira sp. Fiocruz
LV3954]
gi|410794618|gb|EKR92518.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. CBC379]
gi|410802989|gb|EKS09133.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. JET]
gi|456875379|gb|EMF90589.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. ST188]
Length = 362
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 79/133 (59%), Gaps = 16/133 (12%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES-------MLEKD 215
KLD L+ +RPTAVN++ A + S E N + L Q+ +S ML++D
Sbjct: 81 KLDELLESRPTAVNLRLAIEEFSSRFPE------ENYSSSNLEQMRKSAEDFALFMLKED 134
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A
Sbjct: 135 LENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTV 191
Query: 276 YCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 192 FADETRPYLQGAR 204
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I++ L +LDQ +LP + + +ED AI+ M VRGAPAIAI G G+V+
Sbjct: 6 LKPILWTNKELILLDQRVLPGITSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIVLY 65
Query: 63 -----------DIKDK-----------------------QFPD-----NELIQLIES--- 80
++K K +FP+ + L Q+ +S
Sbjct: 66 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLAIEEFSSRFPEENYSSSNLEQMRKSAED 125
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
ML++D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 FALFMLKEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELK 211
>gi|52695620|pdb|1T5O|A Chain A, Crystal Structure Of The Translation Initiation Factor
Eif-2b, Subunit Delta, From A. Fulgidus
gi|52695621|pdb|1T5O|B Chain B, Crystal Structure Of The Translation Initiation Factor
Eif-2b, Subunit Delta, From A. Fulgidus
gi|52695622|pdb|1T5O|C Chain C, Crystal Structure Of The Translation Initiation Factor
Eif-2b, Subunit Delta, From A. Fulgidus
gi|52695623|pdb|1T5O|D Chain D, Crystal Structure Of The Translation Initiation Factor
Eif-2b, Subunit Delta, From A. Fulgidus
Length = 351
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI---VDIKDKQFPDNDSL 156
LID KL V+ N LA A A+ +L A + ++++F D D L
Sbjct: 14 LIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIALAAREREFADVDEL 73
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
++++ + D+L S RPTAVN+ ++ +L+ K V VK ++ E + E+D+
Sbjct: 74 KEHLKKAADFLASTRPTAVNL---FVGIERALNAALKGESVEEVKELALREAEKLAEEDV 130
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+ +G GA+ L D + VLT+CN G LAT ++GTALGV+RS K
Sbjct: 131 ERNRKMGEYGAELLEDGD------VVLTYCNAGRLATVDWGTALGVVRSAVEQGKEIRVI 184
Query: 277 CTETRPYNQGAR 288
ETRP NQG+R
Sbjct: 185 ACETRPLNQGSR 196
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 53/179 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+SI ++ LK++DQ LP ++++ NVE+ AIK + VRGAPA+ G G+ +
Sbjct: 2 SLRSIFWD-DGLKLIDQTKLPEKLEVIECRNVEELADAIKKLAVRGAPALEAAGAYGIAL 60
Query: 63 DIKDKQFPD-NEL---------------------------------------------IQ 76
++++F D +EL ++
Sbjct: 61 AAREREFADVDELKEHLKKAADFLASTRPTAVNLFVGIERALNAALKGESVEEVKELALR 120
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E + E+D+ N+ +G GA+ L D + VLT+CN G LAT ++GTALGV+RS
Sbjct: 121 EAEKLAEEDVERNRKMGEYGAELLEDGD------VVLTYCNAGRLATVDWGTALGVVRS 173
>gi|392944519|ref|ZP_10310161.1| S-methyl-5-thioribose-1-phosphate isomerase [Frankia sp. QA3]
gi|392287813|gb|EIV93837.1| S-methyl-5-thioribose-1-phosphate isomerase [Frankia sp. QA3]
Length = 342
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 41/185 (22%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+ +++ SL++LDQ LP +++N+ ++ AI+ + VRGAPA+ + G G+ + +
Sbjct: 10 RPLVWTGTSLRLLDQTALPEALVHLEVNDPDELVAAIRRLAVRGAPALGVAGAFGVALAL 69
Query: 65 KDKQFPDNELIQL--------------------------------------IESMLEKDI 86
+ + E QL E + +D
Sbjct: 70 RSAERDGWEPGQLDAALRRLRAARPTALALAXGVDAAVRRIHDGLPAVLAVAERLAAEDE 129
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH--GANKIVD 144
+ N+AIGR+GA ++ R L VLTHCNTGSLATA +GTALG+IR LH GA ++V
Sbjct: 130 AANRAIGRHGADGVLARTTR-RPLRVLTHCNTGSLATAGWGTALGIIRELHARGAVEVVH 188
Query: 145 IKDKQ 149
+ + +
Sbjct: 189 VDETR 193
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
++ + E + +D + N+AIGR+GA ++ L VLTHCNTGSLATA +GTALG+I
Sbjct: 117 VLAVAERLAAEDEAANRAIGRHGADGVLARTT-RRPLRVLTHCNTGSLATAGWGTALGII 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R LH + + ETRP QG+R
Sbjct: 176 RELHARGAVEVVHVDETRPLLQGSR 200
>gi|448514523|ref|XP_003867136.1| Mri1 protein [Candida orthopsilosis Co 90-125]
gi|380351474|emb|CCG21698.1| Mri1 protein [Candida orthopsilosis Co 90-125]
Length = 402
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 82/140 (58%), Gaps = 13/140 (9%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQLIESMLEKDISDNK 220
+ LDYL+S+RPTAVN+ A + +K L+++ P+N + +L+ + ++D+++N
Sbjct: 88 QSLDYLISSRPTAVNLANAINDIKELLAKYENTQPLNEEIYNQLLNYATKLYDEDLANNY 147
Query: 221 AIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANK----- 271
IG NG + + +++T CNTGSLAT+ +GTALG+IRS H NK
Sbjct: 148 KIGENGLNYIKESLRKENFEGPFSIVTICNTGSLATSGHGTALGIIRSTYHALNKEQSNE 207
Query: 272 ---IGAAYCTETRPYNQGAR 288
+ + ETRPYNQGA+
Sbjct: 208 QFYLEKVFPLETRPYNQGAK 227
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 61/207 (29%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+LQ+I +++ ++K IL+QL+LP+ + + I + DA+ +IKSMQVRGAPAIAIVG
Sbjct: 6 KTLQAIKFDRDNIKLDILNQLVLPYATTYIPITTIGDAFNSIKSMQVRGAPAIAIVGAFA 65
Query: 60 LVVD-------------------------------------IKD-KQF--------PDNE 73
+VVD I D K+ P NE
Sbjct: 66 VVVDTYNYLNENSGGRNVNHLLQSLDYLISSRPTAVNLANAINDIKELLAKYENTQPLNE 125
Query: 74 -----LIQLIESMLEKDISDNKAIGRNG----AQALIDLNPRVSKLNVLTHCNTGSLATA 124
L+ + ++D+++N IG NG ++L N +++T CNTGSLAT+
Sbjct: 126 EIYNQLLNYATKLYDEDLANNYKIGENGLNYIKESLRKENFE-GPFSIVTICNTGSLATS 184
Query: 125 EYGTALGVIRS-LHGANKIVDIKDKQF 150
+GTALG+IRS H NK + ++QF
Sbjct: 185 GHGTALGIIRSTYHALNK--EQSNEQF 209
>gi|444526376|gb|ELV14327.1| Methylthioribose-1-phosphate isomerase [Tupaia chinensis]
Length = 341
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLI 208
P +L +V ++LD+LV+ARPTAVNM RAA + + + A+ + +TV+ R+IQ
Sbjct: 110 PGLAALVAFVRDQLDFLVTARPTAVNMARAARDLADAAAREAERDGATEDTVRERVIQWA 169
Query: 209 ESMLEKDISDNKAIGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E MLEKD+ DN++IG GA L+ + P K+ VLTHCNTG+LATA YGTAL V+
Sbjct: 170 EDMLEKDLRDNQSIGDLGAHHLLQRVAPQGGKVTVLTHCNTGALATAGYGTALAVVV--- 226
Query: 268 GANKI 272
GA+++
Sbjct: 227 GADRV 231
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 56/156 (35%)
Query: 41 IKSMQVRGAPAIAIVGCL----------------GLVVDIKDK-QF-----PD------- 71
+ +QVRGAPAIA+VGCL LV ++D+ F P
Sbjct: 80 VPPLQVRGAPAIALVGCLSLALELQAGRGGPGLAALVAFVRDQLDFLVTARPTAVNMARA 139
Query: 72 -----------------------NELIQLIESMLEKDISDNKAIGRNGAQALID-LNPRV 107
+IQ E MLEKD+ DN++IG GA L+ + P+
Sbjct: 140 ARDLADAAAREAERDGATEDTVRERVIQWAEDMLEKDLRDNQSIGDLGAHHLLQRVAPQG 199
Query: 108 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
K+ VLTHCNTG+LATA YGTAL V+ GA+++V
Sbjct: 200 GKVTVLTHCNTGALATAGYGTALAVVV---GADRVV 232
>gi|359683961|ref|ZP_09253962.1| translation initiation factor 2B [Leptospira santarosai str.
2000030832]
Length = 385
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDISDNKA 221
KLD L+ +RPTAVN++ A + S E +S + ++ ML++D+ +N
Sbjct: 104 KLDELLESRPTAVNLRLAIEEFSSRFPEADYSSSNLEQMRKSAEDFALFMLKEDLENNLT 163
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL A + ETR
Sbjct: 164 LSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETR 220
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 221 PYLQGAR 227
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 63/222 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I++ L +LDQ +LP + + +ED AI+ M VRGAPAIAI G G+V+
Sbjct: 29 LKPILWTNKELILLDQRVLPGITSYLTAKTLEDCIFAIREMVVRGAPAIAITGAFGIVLY 88
Query: 63 -----------DIKDK-----------------------QFPD-----NELIQLIES--- 80
++K K +FP+ + L Q+ +S
Sbjct: 89 LNGLSSKPTFSELKIKLDELLESRPTAVNLRLAIEEFSSRFPEADYSSSNLEQMRKSAED 148
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
ML++D+ +N + +N A +L +P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 149 FALFMLKEDLENNLTLSKN-ALSLFPKSP--SSLNIITHCNTGALATAGHGTALGVIRSL 205
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A SL + E YL AR TA +K
Sbjct: 206 RDAGH-------------SLTVFADETRPYLQGARLTAWELK 234
>gi|385305295|gb|EIF49283.1| putative initiation factor 2 subunit family protein [Dekkera
bruxellensis AWRI1499]
Length = 333
Score = 93.6 bits (231), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 12/136 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
+D LVS+RPTAVN+ A + ++ + + K S + + ++ S+ + D+ N IG
Sbjct: 19 IDTLVSSRPTAVNLSNACNEIREVIKSF-KCSNLXXLYNEILGFARSLYKSDLRSNMQIG 77
Query: 224 RNGAQALID--LNPGVS-KLNVLTHCNTGSLATAEYGTALGVIRSL-HGAN-------KI 272
+G + + D L S V+T CNTGSLAT+ YGTALG+IR+L HG N K+
Sbjct: 78 SHGKRYIYDELLKENFSGDFAVMTICNTGSLATSGYGTALGIIRALYHGZNEQLHLPFKM 137
Query: 273 GAAYCTETRPYNQGAR 288
Y ETRPYNQG+R
Sbjct: 138 SHVYSLETRPYNQGSR 153
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALID--LNPRVS-KLNVLTHCNTGSLATAEYGT 128
NE++ S+ + D+ N IG +G + + D L S V+T CNTGSLAT+ YGT
Sbjct: 56 NEILGFARSLYKSDLRSNMQIGSHGKRYIYDELLKENFSGDFAVMTICNTGSLATSGYGT 115
Query: 129 ALGVIRSL-HGANK 141
ALG+IR+L HG N+
Sbjct: 116 ALGIIRALYHGZNE 129
>gi|220934706|ref|YP_002513605.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|254811028|sp|B8GRR4.1|MTNA_THISH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|219996016|gb|ACL72618.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 348
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 99/220 (45%), Gaps = 62/220 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
++++++++ SLK+LDQ LP + +DI +V A AI+ M VRGAPAI I G+
Sbjct: 8 FDTVRAVLWDGTSLKLLDQRRLPRETVYLDIPDVGAAADAIREMVVRGAPAIGITAAYGV 67
Query: 61 VV----------DIKDKQFPDNE-----------LIQLIESML----------------- 82
V+ D D PD E L + M
Sbjct: 68 VLAARRLPADTPDWLDALTPDLERLAASRPTAVNLFWALARMKSVIGQVGADLPARLEAE 127
Query: 83 -----EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
E D++DN+ +G GA AL+D VLTHCNTGSLAT YGTALGVIRS +
Sbjct: 128 ARRIHEDDLADNRRMGELGA-ALMD-----PAEAVLTHCNTGSLATGGYGTALGVIRSAY 181
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
G +I + Y E +L AR TA +
Sbjct: 182 GQQRIKKV-------------YADETRPWLQGARLTAWEL 208
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L ++RPTAVN+ A +KS + + P RL + E D++DN+ +G
Sbjct: 89 LERLAASRPTAVNLFWALARMKSVIGQVGADLP-----ARLEAEARRIHEDDLADNRRMG 143
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA AL+D VLTHCNTGSLAT YGTALGVIRS +G +I Y ETRP+
Sbjct: 144 ELGA-ALMD-----PAEAVLTHCNTGSLATGGYGTALGVIRSAYGQQRIKKVYADETRPW 197
Query: 284 NQGAR 288
QGAR
Sbjct: 198 LQGAR 202
>gi|111220865|ref|YP_711659.1| methylthioribose-1-phosphate isomerase [Frankia alni ACN14a]
gi|111148397|emb|CAJ60069.1| methylthioribose-1-phosphate isomerase (MTR-1-P isomerase) [Frankia
alni ACN14a]
Length = 354
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 41/185 (22%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+ +++ SL++LDQ LP +++++ ++ AI+ + VRGAPA+ + G G+ + +
Sbjct: 30 RPLVWTGTSLRLLDQTALPAALVHLEVDDPDELVAAIRRLAVRGAPALGVAGAFGVALAL 89
Query: 65 KDKQ------------------------------------FPDN--ELIQLIESMLEKDI 86
+ + PD ++ + E + +D
Sbjct: 90 RRAERDGWEPGRLDAALGRLRGARPTALALAAGVDAAAACIPDGLAAVLAVAERLAAEDE 149
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH--GANKIVD 144
+ N+AIGR+GA ++ R L VLTHCNTGSLATA +GTALGVIR LH GA ++V
Sbjct: 150 AANRAIGRHGADGVLARTTR-RPLRVLTHCNTGSLATAGWGTALGVIRELHARGAVEVVH 208
Query: 145 IKDKQ 149
+ + +
Sbjct: 209 VDETR 213
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
++ + E + +D + N+AIGR+GA ++ L VLTHCNTGSLATA +GTALGVI
Sbjct: 137 VLAVAERLAAEDEAANRAIGRHGADGVLARTT-RRPLRVLTHCNTGSLATAGWGTALGVI 195
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R LH + + ETRP QG+R
Sbjct: 196 RELHARGAVEVVHVDETRPLLQGSR 220
>gi|71409384|ref|XP_807040.1| translation initiation factor 2 subunit [Trypanosoma cruzi strain
CL Brener]
gi|122017238|sp|Q4CY36.1|MTNA1_TRYCC RecName: Full=Methylthioribose-1-phosphate isomerase 1; Short=M1Pi
1; Short=MTR-1-P isomerase 1; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 1;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein 1
gi|70870951|gb|EAN85189.1| translation initiation factor 2 subunit, putative [Trypanosoma
cruzi]
Length = 372
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 82/135 (60%), Gaps = 2/135 (1%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D +++ E D +++ARPTAVN+ + +K +++ + V+ + L E +
Sbjct: 84 DGTRRFLLESCDTVMTARPTAVNLSKTLIRLKRDIADVTANTAGGLVEACAV-LAEKIYA 142
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D++ N+ I R+GA + L SK++V+T CNTG+LAT+ YGTALGV+R L K+
Sbjct: 143 EDVAYNEGIMRHGAAHVTQLVKK-SKVSVITICNTGALATSRYGTALGVVRQLFYEGKLE 201
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 202 QVYACETRPWNQGAR 216
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L E + +D++ N+ I R+GA + L + SK++V+T CNTG+LAT+ YGTALGV+R L
Sbjct: 136 LAEKIYAEDVAYNEGIMRHGAAHVTQLVKK-SKVSVITICNTGALATSRYGTALGVVRQL 194
Query: 137 HGANKI 142
K+
Sbjct: 195 FYEGKL 200
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
+L+SI Y + +L++LDQ LP + +I V+D + AIK M+VRGAP
Sbjct: 8 TLESIQYARGTLRLLDQRKLPFETVFDEILTVDDIWTAIKEMRVRGAP 55
>gi|323302593|gb|EGA56400.1| YPR118W-like protein [Saccharomyces cerevisiae FostersB]
Length = 364
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 42 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 98
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 99 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 158
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 159 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 193
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYG 127
D L + ++++D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YG
Sbjct: 86 DGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYG 145
Query: 128 TALGVIRSL 136
TALGVIRSL
Sbjct: 146 TALGVIRSL 154
>gi|323350243|gb|EGA84390.1| YPR118W-like protein [Saccharomyces cerevisiae VL3]
Length = 364
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + ++LD+L+S+RPTAVN+ + +K+ L +S + L + +++
Sbjct: 42 ESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILK---SSSDLKAFDGSLYNYVCELID 98
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL---- 266
+D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 99 EDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSLWKDS 158
Query: 267 -------------HGANKIGAAYCTETRPYNQGAR 288
++G + ETRPYNQG+R
Sbjct: 159 LAKTDKADSGLDNEKCPRMGHVFPLETRPYNQGSR 193
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 3/69 (4%)
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYG 127
D L + ++++D+++N +G NGA+ LID+ + + VLT CNTGSLAT+ YG
Sbjct: 86 DGSLYNYVCELIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYG 145
Query: 128 TALGVIRSL 136
TALGVIRSL
Sbjct: 146 TALGVIRSL 154
>gi|410939260|ref|ZP_11371094.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira noguchii
str. 2006001870]
gi|410785679|gb|EKR74636.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira noguchii
str. 2006001870]
Length = 364
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 105/223 (47%), Gaps = 63/223 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+ I+++ L +LDQ +LP T+ + N+ED AI+ M VRGAPAIAI G G+ +
Sbjct: 6 LKPILWKNKELILLDQRVLPGTTSYITAKNLEDCIFAIREMVVRGAPAIAITGAFGITLY 65
Query: 63 -----------DIKDK-----------------------QFPDN-------ELIQ----- 76
++K K +FP++ E IQ
Sbjct: 66 WNSLVSKPPFSELKLKLSDLLESRPTAVNLRLAIEEFYSRFPESNYSSFSLEEIQKGAEE 125
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L ML++D+ +N + ++ AL + S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 LALFMLKEDLENNLTLSKH---ALSIFPKQPSSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A SL + E YL AR TA ++
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELQE 212
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 77/127 (60%), Gaps = 4/127 (3%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNKA 221
KL L+ +RPTAVN++ A + S E +S + ++ +L ML++D+ +N
Sbjct: 81 KLSDLLESRPTAVNLRLAIEEFYSRFPESNYSSFSLEEIQKGAEELALFMLKEDLENNLT 140
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ ++ A ++ P S LN++THCNTG+LATA +GTALGVIRSL A + ETR
Sbjct: 141 LSKH-ALSIFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETR 197
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 198 PYLQGAR 204
>gi|374582906|ref|ZP_09656000.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfosporosinus
youngiae DSM 17734]
gi|374418988|gb|EHQ91423.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfosporosinus
youngiae DSM 17734]
Length = 345
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ D L ++ L RPTAVN+ A ++ L E + V+ LI+ +
Sbjct: 67 ERDGLPAFMERVQARLAETRPTAVNLFWALRRMEDRLRECWDMDDIEDVRRVLIEEAGRI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D N+ IG +G + + + K N+LTHCN G+LAT EYGTALGVIRS H A K
Sbjct: 127 AEDDRRMNRLIGEHGNEVVPE------KANILTHCNAGALATVEYGTALGVIRSAHQAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGAR
Sbjct: 181 MIHVYADETRPLLQGAR 197
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++SI + ++L+ILDQ LP D + + +AI++M+VRGAPAI G V+
Sbjct: 1 MKSIEWLGNTLRILDQSKLPTEIVYRDAVSYKSVAEAIENMEVRGAPAIGAAVAYGFVLG 60
Query: 64 IKDKQFPDNELIQLIESMLEK-----------------------------DISD------ 88
+ Q + L +E + + DI D
Sbjct: 61 ALEYQGERDGLPAFMERVQARLAETRPTAVNLFWALRRMEDRLRECWDMDDIEDVRRVLI 120
Query: 89 -------------NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
N+ IG +G + + + K N+LTHCN G+LAT EYGTALGVIRS
Sbjct: 121 EEAGRIAEDDRRMNRLIGEHGNEVVPE------KANILTHCNAGALATVEYGTALGVIRS 174
Query: 136 LHGANKIVDI 145
H A K++ +
Sbjct: 175 AHQAGKMIHV 184
>gi|409045024|gb|EKM54505.1| hypothetical protein PHACADRAFT_162899 [Phanerochaete carnosa
HHB-10118-sp]
Length = 388
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 84/139 (60%), Gaps = 5/139 (3%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLE 213
+L+ +V LDYL +ARPTAVN+ A + S+L A ++ L+ +++ +
Sbjct: 84 ALQDHVQPLLDYLYTARPTAVNLSAATRRLTSTLQAGVASGKDARSIAQSLVAEGKAIDD 143
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKL----NVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+D+S N+ + R GA+ L++ KL ++T CNTGSLAT+ YGTALG+I LH
Sbjct: 144 EDVSRNREMSRRGAEWLLEQVAKKGKLPAELQLMTVCNTGSLATSGYGTALGLITHLHET 203
Query: 270 NKIGAAYCTETRPYNQGAR 288
K+ A+ T++ PY+QG+R
Sbjct: 204 GKLKRAFYTQSTPYHQGSR 222
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 65 KDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----NVLTHCNTGS 120
KD + L+ +++ ++D+S N+ + R GA+ L++ + KL ++T CNTGS
Sbjct: 125 KDARSIAQSLVAEGKAIDDEDVSRNREMSRRGAEWLLEQVAKKGKLPAELQLMTVCNTGS 184
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALG+I LH K+
Sbjct: 185 LATSGYGTALGLITHLHETGKL 206
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG 48
L SI ++I++QLLLPH+ + V+I+++E A+ AIK M +RG
Sbjct: 6 LTSIRTTGTKIEIVNQLLLPHSVQFVEIDSIEKAHDAIKRMIIRG 50
>gi|431794561|ref|YP_007221466.1| methylthioribose-1-phosphate isomerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784787|gb|AGA70070.1| methylthioribose-1-phosphate isomerase [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 345
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A ++ L E + + ++ L+ E++ E D N+ IG +G
Sbjct: 82 LAETRPTAVNLFWALRRMEDRLREQHGETDLAKIRQALLDEAETIAEDDRRVNRLIGEHG 141
Query: 227 AQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
NP VS+ N+LTHCN GSLAT EYGTALGVIR+ H K Y ETRP+ Q
Sbjct: 142 -------NPIVSEEANILTHCNAGSLATVEYGTALGVIRAAHDTGKKVHVYADETRPFLQ 194
Query: 286 GAR 288
GAR
Sbjct: 195 GAR 197
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 99/231 (42%), Gaps = 82/231 (35%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDIN-----NVEDAYQAIKSMQVRGAPAIA-- 53
MK+L+ + +SL+ILDQ LP V+IN ED +AI++M VRGAPAI
Sbjct: 1 MKALE---WMGNSLRILDQTRLP-----VEINYQLATTYEDVAKAIETMAVRGAPAIGSA 52
Query: 54 ---------------------------------------IVGCLGLVVDIKDKQFPDNEL 74
+ L + D +Q + +L
Sbjct: 53 AAYGYALGALQYSGEFEGVHDHMEQVKNRLAETRPTAVNLFWALRRMEDRLREQHGETDL 112
Query: 75 IQLIESML-------EKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEY 126
++ +++L E D N+ IG +G NP VS+ N+LTHCN GSLAT EY
Sbjct: 113 AKIRQALLDEAETIAEDDRRVNRLIGEHG-------NPIVSEEANILTHCNAGSLATVEY 165
Query: 127 GTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
GTALGVIR+ H K V + Y E +L AR T + +
Sbjct: 166 GTALGVIRAAHDTGKKVHV-------------YADETRPFLQGARLTTLEL 203
>gi|402574101|ref|YP_006623444.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus meridiei
DSM 13257]
gi|402255298|gb|AFQ45573.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus meridiei
DSM 13257]
Length = 345
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D L ++ + L RPTAVN+ A ++ L E ++ V+ L + +
Sbjct: 67 DRDGLPSFMEKVQSRLAETRPTAVNLFWALRRMEDRLRECWDMDDLDDVRRVLTEEANRI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D N+ IG G + + D K N+LTHCN G+LAT EYGTALGVIRS H A K
Sbjct: 127 AEDDRRMNRLIGEVGNEIVPD------KANILTHCNAGALATVEYGTALGVIRSAHLAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGAR
Sbjct: 181 MIHVYADETRPLLQGAR 197
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 42/184 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++SI + ++L+ILDQ LP D + E +AI++M+VRGAPAI G V+
Sbjct: 1 MKSIEWLGNALRILDQSKLPVEILYRDAVSYESVAEAIENMEVRGAPAIGAAVAYGFVLG 60
Query: 64 IKDKQFPDNELIQLIESMLEK-----------------------------DISDNKAIGR 94
+ Q + L +E + + D+ D + +
Sbjct: 61 ALEYQGDRDGLPSFMEKVQSRLAETRPTAVNLFWALRRMEDRLRECWDMDDLDDVRRVLT 120
Query: 95 NGAQALIDLNPRVSKL-------------NVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
A + + + R+++L N+LTHCN G+LAT EYGTALGVIRS H A K
Sbjct: 121 EEANRIAEDDRRMNRLIGEVGNEIVPDKANILTHCNAGALATVEYGTALGVIRSAHLAGK 180
Query: 142 IVDI 145
++ +
Sbjct: 181 MIHV 184
>gi|325290417|ref|YP_004266598.1| methylthioribose-1-phosphate isomerase [Syntrophobotulus glycolicus
DSM 8271]
gi|324965818|gb|ADY56597.1| methylthioribose-1-phosphate isomerase [Syntrophobotulus glycolicus
DSM 8271]
Length = 344
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 20/167 (11%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A A +G ALG +L +D D LE+ RPTAVN+
Sbjct: 51 AAASFGFALG---ALAFKGNCLDFWDYMETVRAELEE-----------TRPTAVNLVWGL 96
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+++ + E K ++ +K L++ +++ +D+ N+ IG G L D K+N
Sbjct: 97 RRMQNRMYEMKKEWDIDKIKEALVEEAKAIAVEDVRINRKIGEYGNTLLPD------KVN 150
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCN GSLAT +YGTALG++RS H + K Y ETRP+ QGAR
Sbjct: 151 ILTHCNAGSLATVDYGTALGIVRSAHDSGKNLHVYAGETRPFLQGAR 197
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 70/225 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ + ++ L ILDQ LP K + ++ +AIK M+VRGAPAI G
Sbjct: 1 MKTLE---WRENCLIILDQTCLPTEIKYREACTYQEVAEAIKKMEVRGAPAIGAAASFGF 57
Query: 61 ----------VVDIKD-------------------------------KQFPDNELIQLIE 79
+D D + + ++ ++ E
Sbjct: 58 ALGALAFKGNCLDFWDYMETVRAELEETRPTAVNLVWGLRRMQNRMYEMKKEWDIDKIKE 117
Query: 80 SMLEK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+++E+ D+ N+ IG G L D K+N+LTHCN GSLAT +YGTALG+
Sbjct: 118 ALVEEAKAIAVEDVRINRKIGEYGNTLLPD------KVNILTHCNAGSLATVDYGTALGI 171
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+RS H + K +L Y GE +L AR T + +
Sbjct: 172 VRSAHDSGK-------------NLHVYAGETRPFLQGARLTVLEL 203
>gi|302038040|ref|YP_003798362.1| 5-methylthioribose-1-phosphate isomerase [Candidatus Nitrospira
defluvii]
gi|300606104|emb|CBK42437.1| 5-methylthioribose-1-phosphate isomerase [Candidatus Nitrospira
defluvii]
Length = 343
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 89/166 (53%), Gaps = 20/166 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA G ALG A + + + F VGE D++ ++RPTAVN+ A
Sbjct: 53 TAAMGVALG-------AQAVTSTQYRDFATQ------VGEICDHVATSRPTAVNLFWAIG 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+K L + S V +K LI +++LE+DI+ KA+G++GA ALI S V
Sbjct: 100 RMKQKLVALSAKS-VAEIKAELITESQTILEEDIALCKAMGQHGA-ALIQ-----SGQTV 152
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN G+LATA YGTALGVIR+ K ETRP QGAR
Sbjct: 153 LTHCNAGALATAGYGTALGVIRAAWEQGKRIQVIADETRPVLQGAR 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 55/195 (28%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD-- 63
++ ++ ++++LDQ LP + +D + QAI+ ++VRGAPAI + +G+ +
Sbjct: 4 TVEWKDGAVRLLDQSRLPMHVEFIDCRDYRAVAQAIRDLKVRGAPAIGVTAAMGVALGAQ 63
Query: 64 -IKDKQFPD---------------------------------------------NELIQL 77
+ Q+ D ELI
Sbjct: 64 AVTSTQYRDFATQVGEICDHVATSRPTAVNLFWAIGRMKQKLVALSAKSVAEIKAELITE 123
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SL 136
+++LE+DI+ KA+G++GA ALI S VLTHCN G+LATA YGTALGVIR +
Sbjct: 124 SQTILEEDIALCKAMGQHGA-ALIQ-----SGQTVLTHCNAGALATAGYGTALGVIRAAW 177
Query: 137 HGANKIVDIKDKQFP 151
+I I D+ P
Sbjct: 178 EQGKRIQVIADETRP 192
>gi|242214573|ref|XP_002473108.1| eukaryotic translation initiation factor 2B [Postia placenta
Mad-698-R]
gi|313471350|sp|B8PBR2.1|MTNA_POSPM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|220727769|gb|EED81678.1| eukaryotic translation initiation factor 2B [Postia placenta
Mad-698-R]
Length = 386
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESMLE 213
+L+++V L Y+ +ARPTAVN+ A + + L + +A + LI+ + + E
Sbjct: 82 TLQEHVEGHLSYINTARPTAVNLGAATRRLSNILEQSVRAGKDARAIAEDLIREGKEIDE 141
Query: 214 KDISDNKAIGRNGAQALID--LNPGVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+D+ NK + R+GA+ L++ G+S LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 142 EDVGRNKQMSRHGAEWLLEQWAAKGLSGSNLNVMTVCNTGSLATSGYGTALGLITHLHET 201
Query: 270 NKIGAAYCTETRPYNQGAR 288
++ A+ T++ PY+QG+R
Sbjct: 202 GRLQRAFYTQSTPYHQGSR 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M L SI + ++I++QLLLPHT++ ++I+ +E A+ AIKSM++RGAPAIA + L
Sbjct: 1 MPGLTSIRTSEGKIEIVNQLLLPHTTEFIEISTIEQAHDAIKSMKIRGAPAIASLAAL 58
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 65 KDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDL----NPRVSKLNVLTHCNTGS 120
KD + +LI+ + + E+D+ NK + R+GA+ L++ S LNV+T CNTGS
Sbjct: 123 KDARAIAEDLIREGKEIDEEDVGRNKQMSRHGAEWLLEQWAAKGLSGSNLNVMTVCNTGS 182
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALG+I LH ++
Sbjct: 183 LATSGYGTALGLITHLHETGRL 204
>gi|452943795|ref|YP_007499960.1| translation initiation factor, aIF-2BI family [Hydrogenobaculum sp.
HO]
gi|452882213|gb|AGG14917.1| translation initiation factor, aIF-2BI family [Hydrogenobaculum sp.
HO]
Length = 330
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 85/172 (49%), Gaps = 36/172 (20%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M L+S ++ L ILDQ LPH + NVED AIK+M VRGAPAI V G
Sbjct: 1 MLELKSFYFKDDILYILDQRKLPHEEVYFEAKNVEDVAYAIKAMLVRGAPAIGCVAAYGF 60
Query: 61 VVDIKD----------------------------KQ--FPDNELIQLIESMLEKDISDNK 90
+ IK+ KQ F + +L++ +++ ++DI NK
Sbjct: 61 YIGIKEGLDVEKVYDILSNTRPTAVNLFWALKRMKQAYFENKDLLEEAKNIEQEDIQANK 120
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+ GA + + K VLTHCNTG+LATA GTALGVI+ L+ KI
Sbjct: 121 RMSEFGASLIKE------KSVVLTHCNTGALATAGVGTALGVIKELYKQGKI 166
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 67/124 (54%), Gaps = 16/124 (12%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A +K + E L++ +++ ++DI NK +
Sbjct: 75 DILSNTRPTAVNLFWALKRMKQAYFE----------NKDLLEEAKNIEQEDIQANKRMSE 124
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA + + K VLTHCNTG+LATA GTALGVI+ L+ KI ETRPY
Sbjct: 125 FGASLIKE------KSVVLTHCNTGALATAGVGTALGVIKELYKQGKIDYVLVDETRPYL 178
Query: 285 QGAR 288
QG+R
Sbjct: 179 QGSR 182
>gi|218526900|sp|B1WQH2.2|MTNA_CYAA5 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
Length = 345
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 50/189 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +I+ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 1 MNTIYPVIWSNNKVLLIDQTSLPSRYTLVEISRYEDMAKAIKTMIVRGAPAIGVAAAYGM 60
Query: 61 VVDIKDKQFPDNE----------------------LIQLIESML---------------- 82
+ +D Q D E L I ML
Sbjct: 61 YLGARDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYETLGTVEEIKKI 120
Query: 83 ---------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVI
Sbjct: 121 LLETAQKIQEEDLQTCQAIGHN-SLSILPTNPE--KLTILTHCNAGALATAGYGTALGVI 177
Query: 134 RSLHGANKI 142
RS+ A ++
Sbjct: 178 RSVWTAGRL 186
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D ++ K++ + L RPTAVN+ A + + E V +K L+
Sbjct: 65 RDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYE--TLGTVEEIKKILL 122
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + + E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 123 ETAQKIQEEDLQTCQAIGHN-SLSILPTNP--EKLTILTHCNAGALATAGYGTALGVIRS 179
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ A ++ + ETRP QGA+
Sbjct: 180 VWTAGRLNRVFADETRPRLQGAK 202
>gi|366988663|ref|XP_003674099.1| hypothetical protein NCAS_0A11600 [Naumovozyma castellii CBS 4309]
gi|342299962|emb|CCC67718.1| hypothetical protein NCAS_0A11600 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 66/200 (33%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I ++K +++I+DQLLLP+ +K + I+ + D YQ IK+MQVRGAPAIAIVG
Sbjct: 2 SLEAIKFDKSKPEQVTVEIIDQLLLPYKTKYIPIHTINDGYQVIKNMQVRGAPAIAIVGS 61
Query: 58 LGLVVD---IKDKQFPDNEL----------------------------------IQLIES 80
L ++V+ ++ + F N+ + +I +
Sbjct: 62 LSILVESQLLQTEAFTRNQWYYDLSDYTSVKSRLQERLKFLLSSRPTAVNLSNALVVITT 121
Query: 81 MLE---------------------KDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHC 116
+LE +D+++N +G NG++ L++ + V T C
Sbjct: 122 LLEESTDLKGFSLAVFKFVTALIEEDLANNIKMGANGSKYLLESLKQEGFEDDFAVFTIC 181
Query: 117 NTGSLATAEYGTALGVIRSL 136
NTGSLAT+ YGTALGVIRSL
Sbjct: 182 NTGSLATSGYGTALGVIRSL 201
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 29/162 (17%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D S++ + E+L +L+S+RPTAVN+ A + + L E ++ + + + + ++
Sbjct: 87 DYTSVKSRLQERLKFLLSSRPTAVNLSNALVVITTLLEE---STDLKGFSLAVFKFVTAL 143
Query: 212 LEKDISDNKAIGRNGAQALIDL--NPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSL-- 266
+E+D+++N +G NG++ L++ G V T CNTGSLAT+ YGTALGVIRSL
Sbjct: 144 IEEDLANNIKMGANGSKYLLESLKQEGFEDDFAVFTICNTGSLATSGYGTALGVIRSLWE 203
Query: 267 --------------------HGANKIGAAYCTETRPYNQGAR 288
H A K+ Y ETRPYNQG+R
Sbjct: 204 DSRNKLNLDNPSKKSKMSFQHKA-KLAHVYPLETRPYNQGSR 244
>gi|183222275|ref|YP_001840271.1| putative 5-methylthioribose-1-phosphate isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189912327|ref|YP_001963882.1| translation initiation factor 2B [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|218526623|sp|B0SFD6.1|MTNA_LEPBA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526912|sp|B0SNY3.1|MTNA_LEPBP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|167777003|gb|ABZ95304.1| Translation initiation factor 2B [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167780697|gb|ABZ98995.1| Putative 5-methylthioribose-1-phosphate isomerase (MTNA)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 357
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 98/215 (45%), Gaps = 61/215 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
I ++ L +LDQ +LP + + I +E+ AI+ M VRGAPAIAI G G+ + K
Sbjct: 9 IQWKSTFLSLLDQRVLPGKKEFLQIQTMEETIVAIREMAVRGAPAIAITGIFGITLGAKK 68
Query: 67 KQFPDNE------LIQLIES-------------------------------------MLE 83
K N + Q+ ES M+
Sbjct: 69 KSGNSNPVDVDSLIKQVFESRPTAVNLSFALKEAKKRVEGVSHWDSIAKVWESYALEMMV 128
Query: 84 KDISDNKAIGRNGAQALIDLNPR-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D+ N+ +G+NGA DL P+ ++ +++THCNTG+LATA +GTALGVIRSL K
Sbjct: 129 QDLKANQTLGKNGA----DLFPKNQNEFHIITHCNTGALATAGHGTALGVIRSLRDQGKK 184
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
V + Y E +L +R TA M
Sbjct: 185 VVV-------------YADETRPFLQGSRLTAFEM 206
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 86/170 (50%), Gaps = 30/170 (17%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
T +G LG + +N + D DSL K V E +RPTAVN+ A
Sbjct: 57 TGIFGITLGAKKKSGNSNPV---------DVDSLIKQVFE-------SRPTAVNLSFALK 100
Query: 183 SVK---SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNP-GVS 238
K +S W +++ M+ +D+ N+ +G+NGA DL P +
Sbjct: 101 EAKKRVEGVSHW------DSIAKVWESYALEMMVQDLKANQTLGKNGA----DLFPKNQN 150
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ +++THCNTG+LATA +GTALGVIRSL K Y ETRP+ QG+R
Sbjct: 151 EFHIITHCNTGALATAGHGTALGVIRSLRDQGKKVVVYADETRPFLQGSR 200
>gi|172037248|ref|YP_001803749.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. ATCC 51142]
gi|171698702|gb|ACB51683.1| probable translation initiation factor, aIF-2BI [Cyanothece sp.
ATCC 51142]
Length = 357
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 50/189 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +I+ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 13 MNTIYPVIWSNNKVLLIDQTSLPSRYTLVEISRYEDMAKAIKTMIVRGAPAIGVAAAYGM 72
Query: 61 VVDIKDKQFPDNE----------------------LIQLIESML---------------- 82
+ +D Q D E L I ML
Sbjct: 73 YLGARDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYETLGTVEEIKKI 132
Query: 83 ---------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVI
Sbjct: 133 LLETAQKIQEEDLQTCQAIGHN-SLSILPTNPE--KLTILTHCNAGALATAGYGTALGVI 189
Query: 134 RSLHGANKI 142
RS+ A ++
Sbjct: 190 RSVWTAGRL 198
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D ++ K++ + L RPTAVN+ A + + E V +K L+
Sbjct: 77 RDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYE--TLGTVEEIKKILL 134
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + + E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 135 ETAQKIQEEDLQTCQAIGHN-SLSILPTNP--EKLTILTHCNAGALATAGYGTALGVIRS 191
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ A ++ + ETRP QGA+
Sbjct: 192 VWTAGRLNRVFADETRPRLQGAK 214
>gi|239907777|ref|YP_002954518.1| initiation factor 2B related family protein [Desulfovibrio
magneticus RS-1]
gi|239797643|dbj|BAH76632.1| initiation factor 2B related family protein [Desulfovibrio
magneticus RS-1]
Length = 406
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--TVKTRLIQLIES 210
D+ + + E L L ARPTAVN++ A + ++ +WA V+ T+ + + L +
Sbjct: 130 GDAWKDRLRELLVELEQARPTAVNLRWAVERMRE---KWASMGDVSLETLLSTWLGLAQD 186
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI NKA+GRNGA + D + VLTHCN G+LATA YGTALGVIR+
Sbjct: 187 MHSEDIEINKAMGRNGADLIADGD------TVLTHCNAGALATAGYGTALGVIRAAFEQG 240
Query: 271 KIGAAYCTETRPYNQGAR 288
K ETRP+ QGAR
Sbjct: 241 KRIQVIADETRPFLQGAR 258
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 83/190 (43%), Gaps = 54/190 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---------- 59
+K +L +LDQ LP + + N D A+++M VRGAPAI + G
Sbjct: 69 DKQALLLLDQRFLPDREECFVVRNTADTVYALQTMVVRGAPAIGVTAAYGCWLAGREAAE 128
Query: 60 -----------LVVDIKDKQFPDNELIQLIESMLEK------------------------ 84
L+V+++ + L +E M EK
Sbjct: 129 AGDAWKDRLRELLVELEQARPTAVNLRWAVERMREKWASMGDVSLETLLSTWLGLAQDMH 188
Query: 85 --DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANK 141
DI NKA+GRNGA + D + VLTHCN G+LATA YGTALGVIR + +
Sbjct: 189 SEDIEINKAMGRNGADLIADGD------TVLTHCNAGALATAGYGTALGVIRAAFEQGKR 242
Query: 142 IVDIKDKQFP 151
I I D+ P
Sbjct: 243 IQVIADETRP 252
>gi|218289177|ref|ZP_03493413.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius LAA1]
gi|218240760|gb|EED07939.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
acidocaldarius LAA1]
Length = 340
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 74/123 (60%), Gaps = 9/123 (7%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
++ +ARPTAVN+ +A D + ++L E +P + L Q ++ +DI N+ IG
Sbjct: 79 WMKTARPTAVNLMQAVDEMMAALDE----APPGSEADALYQRAVAIALRDIETNRRIGEI 134
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA+ + + G VLTHCNTGSLAT EYGTALG++R++ + Y ETRPY Q
Sbjct: 135 GAK-WVARHGG----RVLTHCNTGSLATVEYGTALGILRAMRAEGTLEHVYVDETRPYLQ 189
Query: 286 GAR 288
GAR
Sbjct: 190 GAR 192
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 97/217 (44%), Gaps = 60/217 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA-------------- 49
+++I Y+ L++LDQ LPH + V ED YQAI+SMQVRGA
Sbjct: 1 MRAIRYQPDRLELLDQTRLPHETVWVTCRTAEDVYQAIRSMQVRGAPAIGAAAAFGLALE 60
Query: 50 -------------PAIA------------IVGCLGLVVDIKDKQFPDNE---LIQLIESM 81
P +A ++ + ++ D+ P +E L Q ++
Sbjct: 61 ARRLGPTDVRARLPEVAAWMKTARPTAVNLMQAVDEMMAALDEAPPGSEADALYQRAVAI 120
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+DI N+ IG GA+ + RV LTHCNTGSLAT EYGTALG++R++
Sbjct: 121 ALRDIETNRRIGEIGAKWVARHGGRV-----LTHCNTGSLATVEYGTALGILRAMRAEGT 175
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
+ + YV E YL AR TA ++
Sbjct: 176 LEHV-------------YVDETRPYLQGARLTAYELQ 199
>gi|354553867|ref|ZP_08973173.1| Methylthioribose-1-phosphate isomerase [Cyanothece sp. ATCC 51472]
gi|353554584|gb|EHC23974.1| Methylthioribose-1-phosphate isomerase [Cyanothece sp. ATCC 51472]
Length = 348
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 50/189 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +I+ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 4 MNTIYPVIWSNNKVLLIDQTSLPSRYTLVEISRYEDMAKAIKTMIVRGAPAIGVAAAYGM 63
Query: 61 VVDIKDKQFPDNE----------------------LIQLIESML---------------- 82
+ +D Q D E L I ML
Sbjct: 64 YLGARDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYETLGTVEEIKKI 123
Query: 83 ---------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVI
Sbjct: 124 LLETAQKIQEEDLQTCQAIGHN-SLSILPTNPE--KLTILTHCNAGALATAGYGTALGVI 180
Query: 134 RSLHGANKI 142
RS+ A ++
Sbjct: 181 RSVWTAGRL 189
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D ++ K++ + L RPTAVN+ A + + E V +K L+
Sbjct: 68 RDIQTQDRETFLKHLDKIAQILRQTRPTAVNLFWAISRMLKTAYE--TLGTVEEIKKILL 125
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + + E+D+ +AIG N + +++ NP KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 126 ETAQKIQEEDLQTCQAIGHN-SLSILPTNP--EKLTILTHCNAGALATAGYGTALGVIRS 182
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ A ++ + ETRP QGA+
Sbjct: 183 VWTAGRLNRVFADETRPRLQGAK 205
>gi|354547005|emb|CCE43738.1| hypothetical protein CPAR2_213820 [Candida parapsilosis]
Length = 403
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 69/228 (30%)
Query: 2 KSLQSIIYEKHSLK--ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K+L++I +++ ++K IL+QL+LP+ + + I +EDA+ AIKSMQVRGAPAIAIVG
Sbjct: 6 KTLEAIKFDRDNIKLEILNQLVLPYATTYIPITTIEDAFNAIKSMQVRGAPAIAIVGAFA 65
Query: 60 LVVDI----------KDKQFPDNELIQLIES----------------------------- 80
+VVD +D + L LI S
Sbjct: 66 VVVDTFNYLHSKTDDRDIDYLFQSLDYLISSRPTAVNLANAINDIKKILASYNGTQPLNE 125
Query: 81 ------------MLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAE 125
+ ++D+++N IG NG + + +++T CNTGSLAT+
Sbjct: 126 EIYHEILAYATKLYDEDLANNFKIGDNGLSYIRESLKEEGFEGPFSIVTICNTGSLATSG 185
Query: 126 YGTALGVIRSLHGA-NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARP 172
+GTALG+IRS + A NK +S EK+ +K+ Y + RP
Sbjct: 186 HGTALGIIRSTYRALNK-----------TESNEKFYLDKV-YPLETRP 221
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 83/143 (58%), Gaps = 13/143 (9%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN-TVKTRLIQLIESMLEKDIS 217
Y+ + LDYL+S+RPTAVN+ A + +K L+ + P+N + ++ + ++D++
Sbjct: 85 YLFQSLDYLISSRPTAVNLANAINDIKKILASYNGTQPLNEEIYHEILAYATKLYDEDLA 144
Query: 218 DNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA-NK-- 271
+N IG NG + + +++T CNTGSLAT+ +GTALG+IRS + A NK
Sbjct: 145 NNFKIGDNGLSYIRESLKEEGFEGPFSIVTICNTGSLATSGHGTALGIIRSTYRALNKTE 204
Query: 272 ------IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQGA+
Sbjct: 205 SNEKFYLDKVYPLETRPYNQGAK 227
>gi|332982429|ref|YP_004463870.1| methylthioribose-1-phosphate isomerase [Mahella australiensis 50-1
BON]
gi|332700107|gb|AEE97048.1| methylthioribose-1-phosphate isomerase [Mahella australiensis 50-1
BON]
Length = 343
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 162 EKLDYLV----SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
++L+Y+ S RPTAVN+ A D + + + +K S V +K + + + M + DI
Sbjct: 75 QRLNYIADVIKSTRPTAVNLFWAVDKILTVAQQASKTSSVEIIKEAMQREADQMAKDDIE 134
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKA+G G Q L LN G S VLTHCN G+LAT YGTALGVIR+ K + Y
Sbjct: 135 ANKAMGEFG-QVL--LNDGDS---VLTHCNAGALATVGYGTALGVIRAAVAHGKKISVYA 188
Query: 278 TETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 189 DETRPFLQGAR 199
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 68/220 (30%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
+ SLK++DQ +LP ++++ + ED AIK+M+VRGAPAI + G+V+ +
Sbjct: 7 WTGSSLKLIDQTVLPLKERIIECRSYEDVADAIKTMKVRGAPAIGVTAAYGMVLGAMGIE 66
Query: 69 FPD--------NELIQLIES---------------------------------------- 80
D N + +I+S
Sbjct: 67 TADASAFMQRLNYIADVIKSTRPTAVNLFWAVDKILTVAQQASKTSSVEIIKEAMQREAD 126
Query: 81 -MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
M + DI NKA+G G L D + +VLTHCN G+LAT YGTALGVIR+
Sbjct: 127 QMAKDDIEANKAMGEFGQVLLNDGD------SVLTHCNAGALATVGYGTALGVIRAAVAH 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K + + Y E +L AR TA + R
Sbjct: 181 GKKISV-------------YADETRPFLQGARLTAWELAR 207
>gi|313471388|sp|Q4Q0R9.2|MTNA_LEIMA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
Length = 375
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
++ ++ D+++++RPTAVN+ +K+ + + V ++L E++ D
Sbjct: 85 VQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTND 144
Query: 216 ISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
++ N+ I R+GA ++ G K+++LT CNTG+LAT+ YGTALGV+R L K+
Sbjct: 145 VAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLE 204
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 205 RVYACETRPWNQGAR 219
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 55/195 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL++LDQ LP + D+ VED + AIK M+VRGAPAIA+ LG+ V
Sbjct: 9 TLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAV 68
Query: 63 -------------------------------------------DIK---DKQFPD----- 71
D+K DK P
Sbjct: 69 ATQRKAANGELKSGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAE 128
Query: 72 --NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
++L E++ D++ N+ I R+GA ++ K+++LT CNTG+LAT+ YG
Sbjct: 129 VAQAFVELAEAVYTNDVAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYG 188
Query: 128 TALGVIRSLHGANKI 142
TALGV+R L K+
Sbjct: 189 TALGVVRQLFYDGKL 203
>gi|442805169|ref|YP_007373318.1| methylthioribose-1-phosphate isomerase MtnA [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741019|gb|AGC68708.1| methylthioribose-1-phosphate isomerase MtnA [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 344
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG LG AN V+ KDK + + + + + + RPTAVN+ A D
Sbjct: 52 TAAYGMVLG-------ANA-VETKDK-----NEFFAQIKQMAEVMKNTRPTAVNLFWAVD 98
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+ + E S + +K+ +++ M +D+ +N+ IG G + + N +
Sbjct: 99 RIVKTAYENRNRS-IEEIKSTILEEARRMDREDVENNRRIGEFGNRLIKSGN------TI 151
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN GSLAT +YGTALGVIR+ H A K Y ETRPY QGAR
Sbjct: 152 LTHCNAGSLATCDYGTALGVIRAAHEAGKKVRVYADETRPYLQGAR 197
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 92/226 (40%), Gaps = 75/226 (33%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
++ + YE LK+LDQ LP + + E +AI++M VRGAPAI + G+V
Sbjct: 1 MRPLYYEDGVLKLLDQTKLPAETVWHEYRTCEQVAEAIRNMIVRGAPAIGVTAAYGMVLG 60
Query: 62 ---VDIKDKQFPDNELIQLIESMLE----------------------------------- 83
V+ KDK NE I+ M E
Sbjct: 61 ANAVETKDK----NEFFAQIKQMAEVMKNTRPTAVNLFWAVDRIVKTAYENRNRSIEEIK 116
Query: 84 ------------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+D+ +N+ IG G + + N +LTHCN GSLAT +YGTALG
Sbjct: 117 STILEEARRMDREDVENNRRIGEFGNRLIKSGN------TILTHCNAGSLATCDYGTALG 170
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
VIR+ H A K V + Y E YL AR TA +
Sbjct: 171 VIRAAHEAGKKVRV-------------YADETRPYLQGARLTAYEL 203
>gi|148269161|ref|YP_001243621.1| aIF-2BI family translation initiation factor [Thermotoga petrophila
RKU-1]
gi|170287823|ref|YP_001738061.1| aIF-2BI family translation initiation factor [Thermotoga sp. RQ2]
gi|218526934|sp|A5IIM2.1|MTNA_THEP1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526937|sp|B1LC23.1|MTNA_THESQ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|147734705|gb|ABQ46045.1| translation initiation factor 2B subunit I family (IF-2BI)
[Thermotoga petrophila RKU-1]
gi|170175326|gb|ACB08378.1| translation initiation factor, aIF-2BI family [Thermotoga sp. RQ2]
Length = 343
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 99/218 (45%), Gaps = 62/218 (28%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+++ + SLK+LDQ LP + V+ E+ AIK M VRGAPAI + G V+ +
Sbjct: 6 KTMEWSGDSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVTAAFGYVLGL 65
Query: 65 KD-----------------------------------KQFPDN----ELIQLIES----M 81
+D K F +N L +++E+ M
Sbjct: 66 RDYKTGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENVDRENLFEILENEALKM 125
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ + K
Sbjct: 126 AYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAMESGK 179
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ + + E YL AR TA + +
Sbjct: 180 RIRV-------------FADETRPYLQGARLTAWELMK 204
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES---- 210
SL ++ + + L RPTAVN+ A + ++ E N + L +++E+
Sbjct: 72 SLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFE-------NVDRENLFEILENEALK 124
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ +
Sbjct: 125 MAYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAMESG 178
Query: 271 KIGAAYCTETRPYNQGAR 288
K + ETRPY QGAR
Sbjct: 179 KRIRVFADETRPYLQGAR 196
>gi|15643673|ref|NP_228719.1| translation initiation factor aIF-2B alpha subunit-related
[Thermotoga maritima MSB8]
gi|403252651|ref|ZP_10918960.1| translation initiation factor aIF-2B alpha subunit-related protein
[Thermotoga sp. EMP]
gi|418044921|ref|ZP_12683017.1| translation initiation factor, aIF-2BI family [Thermotoga maritima
MSB8]
gi|11132014|sp|Q9X013.1|MTNA_THEMA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|4981447|gb|AAD35992.1|AE001755_15 translation initiation factor, aIF-2B alpha subunit-related
[Thermotoga maritima MSB8]
gi|351678003|gb|EHA61150.1| translation initiation factor, aIF-2BI family [Thermotoga maritima
MSB8]
gi|402812141|gb|EJX26621.1| translation initiation factor aIF-2B alpha subunit-related protein
[Thermotoga sp. EMP]
Length = 343
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 100/218 (45%), Gaps = 62/218 (28%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+++ + +SLK+LDQ LP + V+ E+ AIK M VRGAPAI + G V+ +
Sbjct: 6 KTMEWSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVAAAFGYVLGL 65
Query: 65 KD-----------------------------------KQFPDN----ELIQLIES----M 81
+D K F +N L +++E+ M
Sbjct: 66 RDYKTGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENADRENLFEILENEALKM 125
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ + K
Sbjct: 126 AYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAVESGK 179
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ + + E YL AR TA + +
Sbjct: 180 RIRV-------------FADETRPYLQGARLTAWELMK 204
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES---- 210
SL ++ + + L RPTAVN+ A + ++ E N + L +++E+
Sbjct: 72 SLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFE-------NADRENLFEILENEALK 124
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ +
Sbjct: 125 MAYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAVESG 178
Query: 271 KIGAAYCTETRPYNQGAR 288
K + ETRPY QGAR
Sbjct: 179 KRIRVFADETRPYLQGAR 196
>gi|392578671|gb|EIW71799.1| hypothetical protein TREMEDRAFT_27291 [Tremella mesenterica DSM
1558]
Length = 394
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 85/148 (57%), Gaps = 9/148 (6%)
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
F D++ +++ LD+L S+RPTAVN+ A + +++ L S ++ + +Q I
Sbjct: 81 FTTPDNVAQHLLPILDHLQSSRPTAVNLSEAMNRIRAVLRHTHSKSTESSEPDKAVQKIV 140
Query: 210 SMLEK--------DISDNKAIGRNGAQAL-IDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
++K D+ N + RNGA ++ G KL +LT CNTGSLAT+ YGTAL
Sbjct: 141 EKVKKVCMAVHDEDLVRNLDMSRNGAMWFWMNRREGKKKLKILTVCNTGSLATSGYGTAL 200
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVI +L A ++ AY +T PY+QG+R
Sbjct: 201 GVITALFQAGQLDTAYYAQTTPYHQGSR 228
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+ SI + ++I+DQLLLPH + + IN+ ++AY AIKSM++RGAPAIA + L L
Sbjct: 13 MTSIRVVEGKIEIVDQLLLPHQVQWLPINSPDEAYDAIKSMKIRGAPAIASLAALSL 69
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 10/82 (12%)
Query: 70 PDNELIQLIE-------SMLEKDISDNKAIGRNGAQALIDLNPRVSK--LNVLTHCNTGS 120
PD + +++E ++ ++D+ N + RNGA +N R K L +LT CNTGS
Sbjct: 132 PDKAVQKIVEKVKKVCMAVHDEDLVRNLDMSRNGAMWFW-MNRREGKKKLKILTVCNTGS 190
Query: 121 LATAEYGTALGVIRSLHGANKI 142
LAT+ YGTALGVI +L A ++
Sbjct: 191 LATSGYGTALGVITALFQAGQL 212
>gi|88601920|ref|YP_502098.1| translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Methanospirillum hungatei JF-1]
gi|88187382|gb|ABD40379.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanospirillum hungatei JF-1]
Length = 354
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 12/138 (8%)
Query: 154 DSLEKY---VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
DSL ++ VG D L RPTAVN+ D V +++ + + K+R + E
Sbjct: 74 DSLPEFLDQVGSDADLLRKTRPTAVNLFYGIDHVLTAI---MSSQTIEEAKSRAVDAAEE 130
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+++ D AIG+ G + + D +LTHCN G+LA AE+GTALGVIRS H A
Sbjct: 131 VIDADRRTCHAIGKTGLEVIPD------GARILTHCNAGALACAEWGTALGVIRSAHEAG 184
Query: 271 KIGAAYCTETRPYNQGAR 288
K + Y ETRP QGAR
Sbjct: 185 KNISVYACETRPLLQGAR 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 42/183 (22%)
Query: 1 MKSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M+ L+ I++ H S++ ++Q LLP ++ + D +AIK + +RGAPA+ G
Sbjct: 3 MEPLRPILFHPHIPSIEYIEQTLLPDIYEVRTARTIPDLAEAIKRLGIRGAPALGCAGGC 62
Query: 59 GLVV-----------DIKDKQFPDNELIQ----------------LIESMLEKDISDNKA 91
G+ + + D+ D +L++ L M + I + K+
Sbjct: 63 GVALSALITKADSLPEFLDQVGSDADLLRKTRPTAVNLFYGIDHVLTAIMSSQTIEEAKS 122
Query: 92 IGRNGAQALIDLNPRVSK-------------LNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+ A+ +ID + R +LTHCN G+LA AE+GTALGVIRS H
Sbjct: 123 RAVDAAEEVIDADRRTCHAIGKTGLEVIPDGARILTHCNAGALACAEWGTALGVIRSAHE 182
Query: 139 ANK 141
A K
Sbjct: 183 AGK 185
>gi|395768500|ref|ZP_10449015.1| initiation factor eIF-2B alpha subunit [Streptomyces acidiscabies
84-104]
Length = 343
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 89/179 (49%), Gaps = 38/179 (21%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ L+++ + L ++DQ LLPH ++ +D+ +V+ AI+ + VRGAPAI + G G+
Sbjct: 3 QELRAVDWTGSGLALIDQTLLPHRTETMDVRDVDTLIDAIQRLVVRGAPAIGVAGAYGVA 62
Query: 62 VDI---KDKQFPDNELIQLIESMLE----------------------------------- 83
V + + + + D +++ + + E
Sbjct: 63 VALIQGEREGWTDLQILDAVARIREARPTAVNLMACVDRVMTRYAEGLDAVLEEAAAVQR 122
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D+ N+A+G +GA LI L +LTHCNTG+LAT +GTALGV+R LH ++
Sbjct: 123 EDVEANRAMGVHGADWLIKKAGVDRPLRILTHCNTGALATTGWGTALGVVRELHARGRV 181
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 70/120 (58%), Gaps = 11/120 (9%)
Query: 170 ARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
ARPTAVN+ D V + +E A +++ ++ +D+ N+A+G +GA
Sbjct: 88 ARPTAVNLMACVDRVMTRYAEGLDA---------VLEEAAAVQREDVEANRAMGVHGADW 138
Query: 230 LIDLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LI GV + L +LTHCNTG+LAT +GTALGV+R LH ++ Y ETRP QG+R
Sbjct: 139 LIK-KAGVDRPLRILTHCNTGALATTGWGTALGVVRELHARGRVEVVYADETRPLLQGSR 197
>gi|398347839|ref|ZP_10532542.1| translation initiation factor 2B [Leptospira broomii str. 5399]
Length = 359
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 109/241 (45%), Gaps = 68/241 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
++L+ I +E L++LDQ ++P + + +D AI+ M VRGAPAIAI G G+V
Sbjct: 4 QNLRPIFWEGRILRLLDQRMIPGKKEWFLASTADDTILAIREMIVRGAPAIAITGLFGVV 63
Query: 62 VDIKD-----------------------------------KQFPDNELIQL----IESML 82
+++K K P + L I+++
Sbjct: 64 LELKKFDAKPSYESLETILSRILESRPTAVNLRTALDEFRKLLPKEKFESLSLSEIQNIA 123
Query: 83 EK--------DISDNKAIGRNGAQALIDLNPRVS-KLNVLTHCNTGSLATAEYGTALGVI 133
EK DI +N A+ NG + L P S K+ +LTHCNTG+LATA +GTALGVI
Sbjct: 124 EKFAIGVYEDDIRNNIALSNNG----LALFPNKSEKIRILTHCNTGALATAGHGTALGVI 179
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSLSE 190
RSLH + L Y E YL AR TA ++ DS + S++
Sbjct: 180 RSLH-------------EEGYDLTVYADETRPYLQGARLTAWELLEEGIDSYLITDSMAG 226
Query: 191 W 191
W
Sbjct: 227 W 227
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 80/140 (57%), Gaps = 10/140 (7%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLS-EWAKASPVNTVKTRLIQLIE 209
P +SLE L ++ +RPTAVN++ A D + L E ++ ++ ++ +
Sbjct: 73 PSYESLETI----LSRILESRPTAVNLRTALDEFRKLLPKEKFESLSLSEIQNIAEKFAI 128
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVS-KLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ E DI +N A+ NG + L P S K+ +LTHCNTG+LATA +GTALGVIRSLH
Sbjct: 129 GVYEDDIRNNIALSNNG----LALFPNKSEKIRILTHCNTGALATAGHGTALGVIRSLHE 184
Query: 269 ANKIGAAYCTETRPYNQGAR 288
Y ETRPY QGAR
Sbjct: 185 EGYDLTVYADETRPYLQGAR 204
>gi|398339695|ref|ZP_10524398.1| translation initiation factor [Leptospira kirschneri serovar Bim
str. 1051]
gi|418678786|ref|ZP_13240060.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687379|ref|ZP_13248538.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418742358|ref|ZP_13298731.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421090480|ref|ZP_15551272.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. 200802841]
gi|421129268|ref|ZP_15589469.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. 2008720114]
gi|400321976|gb|EJO69836.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|410000694|gb|EKO51322.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. 200802841]
gi|410359464|gb|EKP06562.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. 2008720114]
gi|410737703|gb|EKQ82442.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750716|gb|EKR07696.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 364
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 63/223 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I+++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFGISLY 65
Query: 60 -------------------------------LVVDIKDKQFPDN-------ELIQ----- 76
L ++ +FP++ E IQ
Sbjct: 66 WNSLISKPPFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSFFSLEEIQKGAEE 125
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L ML++D+ +N + + A +L P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 LALFMLQEDLENNLRLSKY-ALSLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A SL + E YL AR TA ++
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELQE 212
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSE--WAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
RPTAVN++ A + S E ++ S + ++ +L ML++D+ +N + + A
Sbjct: 89 RPTAVNLRLAIEEFSSRFPESNYSFFS-LEEIQKGAEELALFMLQEDLENNLRLSKY-AL 146
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+L P S LN++THCNTG+LATA +GTALGVIRSL A + ETRPY QGAR
Sbjct: 147 SLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGAR 204
>gi|418695329|ref|ZP_13256349.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. H1]
gi|421108049|ref|ZP_15568593.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. H2]
gi|409956783|gb|EKO15704.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. H1]
gi|410006750|gb|EKO60487.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira kirschneri
str. H2]
Length = 364
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 63/223 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I+++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFGISLY 65
Query: 60 -------------------------------LVVDIKDKQFPDN-------ELIQ----- 76
L ++ +FP++ E IQ
Sbjct: 66 WNSLISKPPFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSFFSLEEIQKGAEE 125
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L ML++D+ +N + + A +L P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 LALFMLQEDLENNLRLSKY-ALSLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A SL + E YL AR TA ++
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELQE 212
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSE--WAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
RPTAVN++ A + S E ++ S + ++ +L ML++D+ +N + + A
Sbjct: 89 RPTAVNLRLAIEEFSSRFPESNYSFFS-LEEIQKGAEELALFMLQEDLENNLRLSKY-AL 146
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+L P S LN++THCNTG+LATA +GTALGVIRSL A + ETRPY QGAR
Sbjct: 147 SLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGAR 204
>gi|297198531|ref|ZP_06915928.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sviceus
ATCC 29083]
gi|197716195|gb|EDY60229.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sviceus
ATCC 29083]
Length = 343
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 11/128 (8%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E + + ARPTAVN+ D V + L E A +++ ++ +D+ N+A
Sbjct: 80 EAVGRIRQARPTAVNLMVCVDRVAARLPEGLDA---------VLEEAAAVQREDVEGNRA 130
Query: 222 IGRNGAQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+G GA L++ ++PG L +LTHCNTG+LATA +GTALGVIR LH ++ Y ET
Sbjct: 131 MGAFGADWLLEKVSPG-RPLRILTHCNTGALATAGWGTALGVIRELHARGRLEVVYADET 189
Query: 281 RPYNQGAR 288
RP QG+R
Sbjct: 190 RPLLQGSR 197
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 46/183 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA------------ 49
+ L+++ + L ++DQ LLPH ++ V + +V+ AI+ + VRGA
Sbjct: 3 QELRAVEWTGSGLALIDQTLLPHRTETVVVRDVDTLVGAIQRLVVRGAPAIGAAGAYGVA 62
Query: 50 ----------------------------PAIAIVGCLGLVVDIKDKQFPD--NELIQLIE 79
A+ ++ C VD + P+ + +++
Sbjct: 63 IALLQGEREDWKQGRLREAVGRIRQARPTAVNLMVC----VDRVAARLPEGLDAVLEEAA 118
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ +D+ N+A+G GA L++ L +LTHCNTG+LATA +GTALGVIR LH
Sbjct: 119 AVQREDVEGNRAMGAFGADWLLEKVSPGRPLRILTHCNTGALATAGWGTALGVIRELHAR 178
Query: 140 NKI 142
++
Sbjct: 179 GRL 181
>gi|24215568|ref|NP_713049.1| translation initiation factor 2B [Leptospira interrogans serovar
Lai str. 56601]
gi|386074783|ref|YP_005989101.1| translation initiation factor 2B [Leptospira interrogans serovar
Lai str. IPAV]
gi|417763570|ref|ZP_12411547.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000624]
gi|417766828|ref|ZP_12414777.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417773938|ref|ZP_12421813.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000621]
gi|418674972|ref|ZP_13236267.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000623]
gi|418688740|ref|ZP_13249882.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. FPW2026]
gi|418699644|ref|ZP_13260599.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418710768|ref|ZP_13271536.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|421128115|ref|ZP_15588333.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421136637|ref|ZP_15596739.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|50401054|sp|Q8F2A8.1|MTNA_LEPIN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|24196715|gb|AAN50067.1| translation initiation factor 2B [Leptospira interrogans serovar
Lai str. 56601]
gi|353458573|gb|AER03118.1| translation initiation factor 2B [Leptospira interrogans serovar
Lai str. IPAV]
gi|400350634|gb|EJP02892.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400362126|gb|EJP18072.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. FPW2026]
gi|409940389|gb|EKN86029.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000624]
gi|410019243|gb|EKO86066.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410434582|gb|EKP83720.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410576409|gb|EKQ39416.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000621]
gi|410578034|gb|EKQ45900.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. 2002000623]
gi|410761328|gb|EKR27511.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410768990|gb|EKR44235.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|456825524|gb|EMF73920.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Canicola str. LT1962]
gi|456967793|gb|EMG09109.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
Length = 364
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 100/223 (44%), Gaps = 63/223 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I+++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFGITLY 65
Query: 60 -------------------------------LVVDIKDKQFPDN-------ELIQ----- 76
L ++ +FP++ E IQ
Sbjct: 66 WNSLVSKPSFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLEEIQKGAEE 125
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L ML +D+ +N + + A +L P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 LALFMLSEDLENNLTLSKY-ALSLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A SL + E YL AR TA ++
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELQE 212
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
RPTAVN++ A + S E +S + ++ +L ML +D+ +N + + A +
Sbjct: 89 RPTAVNLRLAIEEFSSRFPESNYSSFSLEEIQKGAEELALFMLSEDLENNLTLSKY-ALS 147
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L P S LN++THCNTG+LATA +GTALGVIRSL A + ETRPY QGAR
Sbjct: 148 LFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGAR 204
>gi|157877524|ref|XP_001687079.1| putative translation initiation factor 2 subunit [Leishmania major
strain Friedlin]
gi|68130154|emb|CAJ09465.1| putative translation initiation factor 2 subunit [Leishmania major
strain Friedlin]
Length = 506
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
++ ++ D+++++RPTAVN+ +K+ + + V ++L E++ D
Sbjct: 216 VQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTND 275
Query: 216 ISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
++ N+ I R+GA ++ G K+++LT CNTG+LAT+ YGTALGV+R L K+
Sbjct: 276 VAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLE 335
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 336 RVYACETRPWNQGAR 350
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 91/195 (46%), Gaps = 55/195 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL++LDQ LP + D+ VED + AIK M+VRGAPAIA+ LG+ V
Sbjct: 140 TLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAV 199
Query: 63 -------------------------------------------DIK---DKQFPDNELIQ 76
D+K DK P +
Sbjct: 200 ATQRKAANGELKSGREVQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAE 259
Query: 77 LIESMLE-------KDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
+ ++ +E D++ N+ I R+GA ++ K+++LT CNTG+LAT+ YG
Sbjct: 260 VAQAFVELAEAVYTNDVAFNEGIMRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYG 319
Query: 128 TALGVIRSLHGANKI 142
TALGV+R L K+
Sbjct: 320 TALGVVRQLFYDGKL 334
>gi|45657059|ref|YP_001145.1| translation initiation factor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417784066|ref|ZP_12431778.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. C10069]
gi|418666390|ref|ZP_13227815.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418679843|ref|ZP_13241100.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418703876|ref|ZP_13264759.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418714231|ref|ZP_13274791.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 08452]
gi|418723990|ref|ZP_13282824.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 12621]
gi|418734687|ref|ZP_13291118.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 12758]
gi|421087138|ref|ZP_15547979.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. HAI1594]
gi|421104938|ref|ZP_15565531.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421115482|ref|ZP_15575888.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119999|ref|ZP_15580313.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. Brem 329]
gi|50400903|sp|Q72T46.1|MTNA_LEPIC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|45600296|gb|AAS69782.1| translation initiation factor [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|400328444|gb|EJO80676.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|409952897|gb|EKO07404.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. C10069]
gi|409962788|gb|EKO26522.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 12621]
gi|410012966|gb|EKO71051.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410347085|gb|EKO98004.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. Brem 329]
gi|410365248|gb|EKP20643.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410430247|gb|EKP74617.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira santarosai
str. HAI1594]
gi|410757883|gb|EKR19488.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410766573|gb|EKR37257.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410772559|gb|EKR52600.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 12758]
gi|410789174|gb|EKR82876.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
str. UI 08452]
gi|455666586|gb|EMF31993.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455792409|gb|EMF44171.1| S-methyl-5-thioribose-1-phosphate isomerase [Leptospira interrogans
serovar Lora str. TE 1992]
Length = 364
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 100/223 (44%), Gaps = 63/223 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---- 59
L+ I+++ L +LDQ +LP T+ + +ED AI+ M VRGAPAIAI G G
Sbjct: 6 LKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFGITLY 65
Query: 60 -------------------------------LVVDIKDKQFPDN-------ELIQ----- 76
L ++ +FP++ E IQ
Sbjct: 66 WNSLVSKPSFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLEEIQKGAEE 125
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
L ML +D+ +N + + A +L P S LN++THCNTG+LATA +GTALGVIRSL
Sbjct: 126 LALFMLSEDLENNLTLSKY-ALSLFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSL 182
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A SL + E YL AR TA ++
Sbjct: 183 RDAGH-------------SLTVFADETRPYLQGARLTAWELQE 212
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
RPTAVN++ A + S E +S + ++ +L ML +D+ +N + + A +
Sbjct: 89 RPTAVNLRLAIEEFSSRFPESNYSSFSLEEIQKGAEELALFMLSEDLENNLTLSKY-ALS 147
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L P S LN++THCNTG+LATA +GTALGVIRSL A + ETRPY QGAR
Sbjct: 148 LFPKQP--SSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGAR 204
>gi|73536049|pdb|2A0U|A Chain A, Crystal Structure Of The Eukaryotic Initiation Factor 2b
From Leishmania Major At 2.1 A Resolution
gi|73536050|pdb|2A0U|B Chain B, Crystal Structure Of The Eukaryotic Initiation Factor 2b
From Leishmania Major At 2.1 A Resolution
Length = 383
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
++ ++ D++ ++RPTAVN+ +K+ + + V ++L E++ D
Sbjct: 93 VQTFLLTSCDFVXTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAEVAQAFVELAEAVYTND 152
Query: 216 ISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
++ N+ I R+GA ++ G K+++LT CNTG+LAT+ YGTALGV+R L K+
Sbjct: 153 VAFNEGIXRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGKLE 212
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 213 RVYACETRPWNQGAR 227
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 90/195 (46%), Gaps = 55/195 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL++LDQ LP + D+ VED + AIK +VRGAPAIA+ LG+ V
Sbjct: 17 TLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEXRVRGAPAIAVSAALGIAV 76
Query: 63 -------------------------------------------DIK---DKQFPD----- 71
D+K DK P
Sbjct: 77 ATQRKAANGELKSGREVQTFLLTSCDFVXTSRPTAVNLFNCLRDLKAQVDKLDPTKAAAE 136
Query: 72 --NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYG 127
++L E++ D++ N+ I R+GA ++ K+++LT CNTG+LAT+ YG
Sbjct: 137 VAQAFVELAEAVYTNDVAFNEGIXRHGAAHILAAAKAEGRDKVSILTICNTGALATSRYG 196
Query: 128 TALGVIRSLHGANKI 142
TALGV+R L K+
Sbjct: 197 TALGVVRQLFYDGKL 211
>gi|358463390|ref|ZP_09173451.1| translation initiation factor, aIF-2BI family [Frankia sp. CN3]
gi|357070317|gb|EHI80040.1| translation initiation factor, aIF-2BI family [Frankia sp. CN3]
Length = 329
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 88/175 (50%), Gaps = 41/175 (23%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-- 64
+++ S+++LDQ LLP VDI+ V+D AI+ + VRGAPA+ I G G+ + I
Sbjct: 1 MVWTGTSVRLLDQTLLPDQLADVDIHRVDDLVAAIRRLAVRGAPALGIAGAYGVALAIVQ 60
Query: 65 KDKQFPD------------------------------------NELIQLIESMLEKDISD 88
++ D + ++ + ++ E D
Sbjct: 61 AAREGWDGSTFTAAVGRLRAARPTALALALGVDAAYAVVDDGLDAVVAVGHALAEADERA 120
Query: 89 NKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
N+AIGR+GA ++ L R L VLTHCNTG+LATA +GTALG+IR LH ++
Sbjct: 121 NRAIGRHGADWILARLGDR--PLRVLTHCNTGALATAAWGTALGIIRELHARGRV 173
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 25/163 (15%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG AL ++++ ++ D + VG L +ARPTA+ + D+
Sbjct: 52 YGVALAIVQAA-----------REGWDGSTFTAAVGR----LRAARPTALALALGVDAAY 96
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+ + + A ++ + ++ E D N+AIGR+GA ++ G L VLTH
Sbjct: 97 AVVDDGLDA---------VVAVGHALAEADERANRAIGRHGADWIL-ARLGDRPLRVLTH 146
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTG+LATA +GTALG+IR LH ++ Y ETRP QG+R
Sbjct: 147 CNTGALATAAWGTALGIIRELHARGRVELVYVDETRPLLQGSR 189
>gi|345878473|ref|ZP_08830185.1| hypothetical protein Rifp1Sym_ce00090 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344224504|gb|EGV50895.1| hypothetical protein Rifp1Sym_ce00090 [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 365
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 15/128 (11%)
Query: 164 LDYLVSARPTAVNMKRAADSVKS---SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
L L +RPTAVN+ A D ++ SL + A P +L+Q E + +D++ N+
Sbjct: 103 LGRLRDSRPTAVNLFWALDRMRGLIDSLDDEANPEP------QLLQEAEQIHAEDVAANR 156
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+G GA ALID GV +THCN G+LAT YGTALGVIR+ H A +I Y ET
Sbjct: 157 CMGELGA-ALIDGPTGV-----ITHCNAGALATGGYGTALGVIRNAHAAGRINKVYADET 210
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 211 RPWLQGAR 218
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 67/229 (29%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
+I + L +LDQ LP +++ +++ + E AI+ M VRGAPAI I G+V+
Sbjct: 26 AIAWHAKQLWLLDQRKLPASAEYLELRSAEATADAIREMVVRGAPAIGITAAYGVVLAAR 85
Query: 63 -------------------------------------------DIKDKQFPDNELIQLIE 79
+ D+ P+ +L+Q E
Sbjct: 86 TAYAAAGSGWKSAIQLDLGRLRDSRPTAVNLFWALDRMRGLIDSLDDEANPEPQLLQEAE 145
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ +D++ N+ +G GA ALID V+THCN G+LAT YGTALGVIR+ H A
Sbjct: 146 QIHAEDVAANRCMGELGA-ALID-----GPTGVITHCNAGALATGGYGTALGVIRNAHAA 199
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+I + Y E +L AR TA + AD++ +L
Sbjct: 200 GRINKV-------------YADETRPWLQGARLTAWELL--ADAIPVTL 233
>gi|374340562|ref|YP_005097298.1| S-methyl-5-thioribose-1-phosphate isomerase [Marinitoga piezophila
KA3]
gi|372102096|gb|AEX86000.1| S-methyl-5-thioribose-1-phosphate isomerase [Marinitoga piezophila
KA3]
Length = 345
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 85/171 (49%), Gaps = 32/171 (18%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A+A +G LGV K+F E+ + E L + RPTAVN+ A
Sbjct: 56 ASAAFGYVLGV---------------KEFIGKPEFEEKMKEVKKTLANTRPTAVNLFWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGV 237
+ ++ L+E + +++LIE + +DI NK +GR G + L D +
Sbjct: 101 ERMEKRLNEIKN-------EENIVELIEKEALDIAFEDIEANKTMGRFGGELLNDGD--- 150
Query: 238 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCNTGSLAT +YGTALGVIR K Y ETRPY QGAR
Sbjct: 151 ---TVLTHCNTGSLATVDYGTALGVIRGARDMGKDIKVYADETRPYLQGAR 198
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 91/218 (41%), Gaps = 63/218 (28%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
S+ + ++DQ LP K V E+ ++IK M VRGAPAI G V+ +K
Sbjct: 8 SMEWTGEEFILIDQRYLPLEEKYVTCKTYEEVAKSIKDMVVRGAPAIGASAAFGYVLGVK 67
Query: 66 D----KQFPD----------------------------------NE--LIQLIES----M 81
+ +F + NE +++LIE +
Sbjct: 68 EFIGKPEFEEKMKEVKKTLANTRPTAVNLFWALERMEKRLNEIKNEENIVELIEKEALDI 127
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+DI NK +GR G + L D + VLTHCNTGSLAT +YGTALGVIR K
Sbjct: 128 AFEDIEANKTMGRFGGELLNDGD------TVLTHCNTGSLATVDYGTALGVIRGARDMGK 181
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
DIK Y E YL AR T + +
Sbjct: 182 --DIK-----------VYADETRPYLQGARLTVWELYK 206
>gi|58271458|ref|XP_572885.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818324|sp|P0CN40.1|MTNA_CRYNJ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|57229144|gb|AAW45578.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 393
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
+VG+ +DYL S+RPTAVN+ A D ++++L + A+ + R+ ++ + ++D+
Sbjct: 96 WVGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQTAGDIIQRVKKICGDVHDEDLE 155
Query: 218 DNKAIGRNGAQALIDLNPGVSKLN-VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N +GR GA+ L G K V+T CNTGSLAT+ YGTA+GVI +L + + AY
Sbjct: 156 RNMKMGRLGAEWLWKKRGGGKKGLKVMTVCNTGSLATSGYGTAIGVITALFQEDHLDTAY 215
Query: 277 CTETRPYNQGAR 288
+T PY+QG+R
Sbjct: 216 YAQTTPYHQGSR 227
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 56/179 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA-------------------- 53
++I+DQLLLPH+ + ++ E+A+ AIK+M++RGAPAIA
Sbjct: 27 VEIIDQLLLPHSVVWMPVSTPEEAFDAIKTMRIRGAPAIASLAALTLRSYLSSSSSPVSS 86
Query: 54 ------IVGCLGLVVDIKDKQFP-----------------DNE--------LIQLIESML 82
++ +G +D P D+E +IQ ++ +
Sbjct: 87 SSSSSDVISWVGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQTAGDIIQRVKKIC 146
Query: 83 ----EKDISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
++D+ N +GR GA+ L L V+T CNTGSLAT+ YGTA+GVI +L
Sbjct: 147 GDVHDEDLERNMKMGRLGAEWLWKKRGGGKKGLKVMTVCNTGSLATSGYGTAIGVITAL 205
>gi|134115022|ref|XP_773809.1| hypothetical protein CNBH2610 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818323|sp|P0CN41.1|MTNA_CRYNB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|50256437|gb|EAL19162.1| hypothetical protein CNBH2610 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 393
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
+VG+ +DYL S+RPTAVN+ A D ++++L + A+ + R+ ++ + ++D+
Sbjct: 96 WVGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQTAGDIIQRVKKICGDVHDEDLE 155
Query: 218 DNKAIGRNGAQALIDLNPGVSKLN-VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N +GR GA+ L G K V+T CNTGSLAT+ YGTA+GVI +L + + AY
Sbjct: 156 RNMKMGRLGAEWLWKKRGGGKKGLKVMTVCNTGSLATSGYGTAIGVITALFQEDHLDTAY 215
Query: 277 CTETRPYNQGAR 288
+T PY+QG+R
Sbjct: 216 YAQTTPYHQGSR 227
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 56/179 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA-------------------- 53
++I+DQLLLPH+ + ++ E+A+ AIK+M++RGAPAIA
Sbjct: 27 VEIIDQLLLPHSVVWMPVSTPEEAFDAIKTMRIRGAPAIASLAALTLRSYLSSSSSPVSS 86
Query: 54 ------IVGCLGLVVDIKDKQFP-----------------DNE--------LIQLIESML 82
++ +G +D P D+E +IQ ++ +
Sbjct: 87 SSSSSDVISWVGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQTAGDIIQRVKKIC 146
Query: 83 ----EKDISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
++D+ N +GR GA+ L L V+T CNTGSLAT+ YGTA+GVI +L
Sbjct: 147 GDVHDEDLERNMKMGRLGAEWLWKKRGGGKKGLKVMTVCNTGSLATSGYGTAIGVITAL 205
>gi|78355123|ref|YP_386572.1| Methylthioribose salvage protein [Desulfovibrio alaskensis G20]
gi|123553580|sp|Q317L9.1|MTNA_DESDG RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|78217528|gb|ABB36877.1| Methylthioribose salvage protein [Desulfovibrio alaskensis G20]
Length = 355
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 87/167 (52%), Gaps = 20/167 (11%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG L + H A + +K + L+ L ARPTAVN++ A +
Sbjct: 55 TAAYGCCLAAYEAGHPA------------PHAQWQKELDTLLEKLAQARPTAVNLRWAVE 102
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++S +NT+ R + E++ E+D S N+AIGR+GA + D + +
Sbjct: 103 RMRSVWKSMGDPD-LNTLIARWLDEAEAIHEEDKSINRAIGRHGATLIQDND------CI 155
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIG-AAYCTETRPYNQGAR 288
+THCN G+LATA YGTALGV+R A + G ETRP+ QGAR
Sbjct: 156 MTHCNAGALATAGYGTALGVVRGAVDAGRTGITVIANETRPFLQGAR 202
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 55/174 (31%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
+ +L +LDQ +LP + N+V D A+++M VRGAPAI + G + +
Sbjct: 10 QDRTLILLDQRVLPTVEEDFYCNDVADTIYALQTMVVRGAPAIGVTAAYGCCLAAYEAGH 69
Query: 70 P------------------------------------------DNELIQLI-------ES 80
P D +L LI E+
Sbjct: 70 PAPHAQWQKELDTLLEKLAQARPTAVNLRWAVERMRSVWKSMGDPDLNTLIARWLDEAEA 129
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ E+D S N+AIGR+GA + D + ++THCN G+LATA YGTALGV+R
Sbjct: 130 IHEEDKSINRAIGRHGATLIQDND------CIMTHCNAGALATAGYGTALGVVR 177
>gi|443923252|gb|ELU42523.1| eukaryotic translation initiation factor 2B [Rhizoctonia solani
AG-1 IA]
Length = 391
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESML 212
++L +V +L YL S+RPTAVN+ A ++++L A + L++ ++
Sbjct: 84 NALRDHVLPQLSYLYSSRPTAVNLGAATRRLQNTLQAGLDAGHSAEDIANALVKEGRAVA 143
Query: 213 EKDISDNKAIGRNGAQALIDLNPG----VSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
++D N+ + ++GA+ L++ S LNV+T CNTGSLAT+ YGTALG+I L
Sbjct: 144 DEDFGRNREMSKHGAEWLVERVKAEGGEASGLNVMTVCNTGSLATSGYGTALGLITHLFE 203
Query: 269 ANKIGAAYCTETRPYNQGAR 288
++G AY T+T PY+QG R
Sbjct: 204 QGQLGKAYFTQTAPYHQGTR 223
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAI 52
L S+ + + I+DQLLLPH K ++++++E AY AIKSM++RGAPAI
Sbjct: 7 LTSLRTDGDKITIIDQLLLPHQEKWIEVDSIEAAYDAIKSMKIRGAPAI 55
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDL----NPRVSKLNVLTHCNTGSLATAEYG 127
N L++ ++ ++D N+ + ++GA+ L++ S LNV+T CNTGSLAT+ YG
Sbjct: 133 NALVKEGRAVADEDFGRNREMSKHGAEWLVERVKAEGGEASGLNVMTVCNTGSLATSGYG 192
Query: 128 TALGVIRSL 136
TALG+I L
Sbjct: 193 TALGLITHL 201
>gi|419761148|ref|ZP_14287408.1| methylthioribose-1-phosphate isomerase [Thermosipho africanus
H17ap60334]
gi|407513829|gb|EKF48710.1| methylthioribose-1-phosphate isomerase [Thermosipho africanus
H17ap60334]
Length = 346
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D ++ K + E + L + RPTAVN+ A + ++ SL ++ K + V L + ++
Sbjct: 72 DFNAFVKKMEEVKEVLANTRPTAVNLFWALNRMEDSLKKYGK---IEGVLEYLEEEAMNI 128
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++DI NKAIGR GA+ L D + VLTHCN G+LAT +YGTALGVIR+ K
Sbjct: 129 AKEDIEVNKAIGRYGAELLKDGD------TVLTHCNAGALATVDYGTALGVIRAAVEQGK 182
Query: 272 IGAAYCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 183 KIKVFADETRPYLQGAR 199
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 98/238 (41%), Gaps = 69/238 (28%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPD- 71
L ++DQ +P + V + ++ AIK M VRGAPAI G V+ ++ D
Sbjct: 14 ELILIDQRKIPLVEEYVSCKSYKEVAVAIKDMVVRGAPAIGASAAFGYVLGAREMFVEDF 73
Query: 72 NELIQLIESMLE---------------------------------------------KDI 86
N ++ +E + E +DI
Sbjct: 74 NAFVKKMEEVKEVLANTRPTAVNLFWALNRMEDSLKKYGKIEGVLEYLEEEAMNIAKEDI 133
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
NKAIGR GA+ L D + VLTHCN G+LAT +YGTALGVIR+ K K
Sbjct: 134 EVNKAIGRYGAELLKDGD------TVLTHCNAGALATVDYGTALGVIRAAVEQGK----K 183
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSLSEWA-KASPVNTV 200
K F D E YL AR TA MK D + ++S W+ K +N V
Sbjct: 184 IKVFAD---------ETRPYLQGARLTAWELMKDGIDVTLISDNMSGWSMKLGKINAV 232
>gi|428204366|ref|YP_007082955.1| S-methyl-5-thioribose-1-phosphate isomerase [Pleurocapsa sp. PCC
7327]
gi|427981798|gb|AFY79398.1| S-methyl-5-thioribose-1-phosphate isomerase [Pleurocapsa sp. PCC
7327]
Length = 350
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 85/179 (47%), Gaps = 50/179 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +++ + + ++DQ LP+ ++V+I+ ED QAI++M VRGAPAI + G+ +
Sbjct: 7 IYPVLWHHNKVSLIDQTRLPNEYEVVEISRCEDMAQAIRTMIVRGAPAIGVAAAYGMYLG 66
Query: 64 IKDKQFPDNELI----------------------QLIESMLE------------------ 83
+D Q D +L I ML+
Sbjct: 67 ARDIQTSDRDLFLKELESVANLLRQTRPTAVNLFWAISRMLKTAYETIGTVEEIRANLFK 126
Query: 84 -------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ KAIG NG L L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 127 TAQEIQSEDLQTCKAIGDNG---LAVLPSKPDKLTILTHCNTGSLATAGYGTALGVIRS 182
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D D K + + L RPTAVN+ A + + E V ++ L
Sbjct: 68 RDIQTSDRDLFLKELESVANLLRQTRPTAVNLFWAISRMLKTAYE--TIGTVEEIRANLF 125
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + + +D+ KAIG NG A++ P KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 126 KTAQEIQSEDLQTCKAIGDNGL-AVLPSKP--DKLTILTHCNTGSLATAGYGTALGVIRS 182
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 183 AWYRGRLARVYADETRPRLQGAK 205
>gi|388579983|gb|EIM20301.1| putative translation initiation factor [Wallemia sebi CBS 633.66]
Length = 345
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
+ + + ++ L+K V + DYL +RPTAVN+ A D ++ + + V+ +K +
Sbjct: 36 LHNSSYNNSQELKKEVKQVCDYLYQSRPTAVNLGIALDQLRQAAE--IDSDSVDNIKKAV 93
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALID-------LNPGVSKLNVLTHCNTGSLATAEYG 257
I + +D+ NK + NGAQ LI+ + G K+++LT CNTGSLAT+ YG
Sbjct: 94 IYQAILVWSEDVERNKQMSDNGAQWLINNLESSGKIEKG-GKISILTVCNTGSLATSGYG 152
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TA G+I LH ++ AY +T PY+QG R
Sbjct: 153 TAFGMITRLHELGRLERAYYAQTTPYHQGTR 183
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 55/163 (33%)
Query: 29 VDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNE--------------- 73
+DI +VE+AY AI++M +RGAPA+A + L + + + + +++
Sbjct: 1 MDITSVEEAYSAIRNMNIRGAPALASLATLSVAQRLHNSSYNNSQELKKEVKQVCDYLYQ 60
Query: 74 -----------LIQLIES---------------------MLEKDISDNKAIGRNGAQALI 101
L QL ++ + +D+ NK + NGAQ LI
Sbjct: 61 SRPTAVNLGIALDQLRQAAEIDSDSVDNIKKAVIYQAILVWSEDVERNKQMSDNGAQWLI 120
Query: 102 DLNPRVS-------KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ N S K+++LT CNTGSLAT+ YGTA G+I LH
Sbjct: 121 N-NLESSGKIEKGGKISILTVCNTGSLATSGYGTAFGMITRLH 162
>gi|281411459|ref|YP_003345538.1| translation initiation factor, aIF-2BI family [Thermotoga
naphthophila RKU-10]
gi|281372562|gb|ADA66124.1| translation initiation factor, aIF-2BI family [Thermotoga
naphthophila RKU-10]
Length = 343
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 91/191 (47%), Gaps = 50/191 (26%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+++ + SLK+LDQ LP + V+ E+ AIK M VRGAPAI + G V+ +
Sbjct: 6 KTMEWSGDSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVTAAFGYVLGL 65
Query: 65 KD-----------------------------------KQFPDN----ELIQLIES----M 81
+D K F +N L +++E+ M
Sbjct: 66 RDYKTGSLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFENVDRENLFEILENEALKM 125
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGAN 140
+DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR ++
Sbjct: 126 AYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAMESGK 179
Query: 141 KIVDIKDKQFP 151
+I D+ P
Sbjct: 180 RIRVFADETRP 190
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES---- 210
SL ++ + + L RPTAVN+ A + ++ E N + L +++E+
Sbjct: 72 SLTDWMKQVKETLARTRPTAVNLFWALNRMEKVFFE-------NVDRENLFEILENEALK 124
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ +
Sbjct: 125 MAYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAMESG 178
Query: 271 KIGAAYCTETRPYNQGAR 288
K + ETRPY QGAR
Sbjct: 179 KRIRVFADETRPYLQGAR 196
>gi|405122099|gb|AFR96866.1| cig2 [Cryptococcus neoformans var. grubii H99]
Length = 393
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 82/132 (62%), Gaps = 2/132 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSE-WAKASPVNTVKTRLIQLIESMLEKDIS 217
++G+ +DYL S+RPTAVN+ A D ++++L + A+ V R+ ++ + ++D+
Sbjct: 96 WIGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQAAGDVIERVKKICGDVHDEDLK 155
Query: 218 DNKAIGRNGAQALIDLNPGVSKLN-VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N +GR GA+ L G K V+T CNTGSLAT+ YGTA+GVI +L + + AY
Sbjct: 156 RNMEMGRLGAEWLWKKRGGGKKGLKVVTVCNTGSLATSGYGTAIGVITALFQEDHLDTAY 215
Query: 277 CTETRPYNQGAR 288
+T PY+QG+R
Sbjct: 216 YAQTTPYHQGSR 227
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 56/179 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL--------------- 58
++I+DQLLLPH+ + + E+AY AIK+M++RGAPAIA + L
Sbjct: 27 VEIVDQLLLPHSVVWMPVFTPEEAYDAIKTMRIRGAPAIASLAALTLRSYLNSSSCPVSS 86
Query: 59 -----------GLVVDIKDKQFPD----NELIQLIESMLEKDISDNKA------------ 91
G +D P E + I + L+ + N+A
Sbjct: 87 SSSSSDVISWIGQTIDYLQSSRPTAVNLGEAMDRIRAALKDSEAQNQAAGDVIERVKKIC 146
Query: 92 -------------IGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+GR GA+ L L V+T CNTGSLAT+ YGTA+GVI +L
Sbjct: 147 GDVHDEDLKRNMEMGRLGAEWLWKKRGGGKKGLKVVTVCNTGSLATSGYGTAIGVITAL 205
>gi|410462948|ref|ZP_11316495.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409983941|gb|EKO40283.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 347
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV--NTVKTRLIQLIES 210
D+ + + E L L ARPTAVN++ A + ++ +WA V +T+ + + L +
Sbjct: 71 GDAWRQRLRELLVELEQARPTAVNLRWAVERMRE---KWAALGDVSLDTLLSTWLGLAQD 127
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI NKA+G++GA+ + D + VLTHCN G+LATA YGTALGVIR+
Sbjct: 128 MHSEDIEINKAMGKHGAELIADGD------TVLTHCNAGALATAGYGTALGVIRAAFEQG 181
Query: 271 KIGAAYCTETRPYNQGAR 288
K ETRP+ QGAR
Sbjct: 182 KRIQVIADETRPFLQGAR 199
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 54/190 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---------- 59
+K +L +LDQ LP + + N D A+++M VRGAPAI + G
Sbjct: 10 DKQALLLLDQRFLPDREECFVVRNTADTVYALQTMVVRGAPAIGVTAAYGCWLAGREAAE 69
Query: 60 -----------LVVDIKDKQFPDNELIQLIESMLEK------------------------ 84
L+V+++ + L +E M EK
Sbjct: 70 AGDAWRQRLRELLVELEQARPTAVNLRWAVERMREKWAALGDVSLDTLLSTWLGLAQDMH 129
Query: 85 --DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANK 141
DI NKA+G++GA+ + D + VLTHCN G+LATA YGTALGVIR + +
Sbjct: 130 SEDIEINKAMGKHGAELIADGD------TVLTHCNAGALATAGYGTALGVIRAAFEQGKR 183
Query: 142 IVDIKDKQFP 151
I I D+ P
Sbjct: 184 IQVIADETRP 193
>gi|401623163|gb|EJS41270.1| YPR118W [Saccharomyces arboricola H-6]
Length = 411
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 23/152 (15%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
++ + +KLD+L+S+RPTAVN+ + +K L ++ + + + ++++D+
Sbjct: 92 KRALNDKLDFLLSSRPTAVNLSNSLVEIKKILK---SSTELQHFDRDMYSYVCQLIDEDL 148
Query: 217 SDNKAIGRNGAQALIDL--NPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGAN--- 270
++N +G NGA+ L D+ N G + VLT CNTGSLAT+ YGTALGVIRSL +
Sbjct: 149 ANNMKMGDNGAKYLTDMLKNDGFEEEFAVLTICNTGSLATSGYGTALGVIRSLWKDSLAK 208
Query: 271 --------------KIGAAYCTETRPYNQGAR 288
K+ + ETRPYNQG+R
Sbjct: 209 ARKTSSGLDSKRYPKMNHVFPLETRPYNQGSR 240
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 52/68 (76%), Gaps = 5/68 (7%)
Query: 3 SLQSIIY-----EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I + E+ S+K+L+QLLLP+T+K + I+ ++D Y IK+MQVRGAPAIAIVG
Sbjct: 2 SLEAICFDRSNSERISVKVLNQLLLPYTTKYIPIHTIDDGYSVIKNMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIK 65
L ++ +I+
Sbjct: 62 LSVLAEIQ 69
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
Query: 68 QFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATA 124
Q D ++ + ++++D+++N +G NGA+ L D+ + + VLT CNTGSLAT+
Sbjct: 130 QHFDRDMYSYVCQLIDEDLANNMKMGDNGAKYLTDMLKNDGFEEEFAVLTICNTGSLATS 189
Query: 125 EYGTALGVIRSL 136
YGTALGVIRSL
Sbjct: 190 GYGTALGVIRSL 201
>gi|302871836|ref|YP_003840472.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
obsidiansis OB47]
gi|302574695|gb|ADL42486.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
obsidiansis OB47]
Length = 342
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E + YL S+RPTAVN+ A + +K L E A+ N + + L+ + ++D S N
Sbjct: 74 IYEIIKYLASSRPTAVNLFWALERMKK-LFEDARNFSQNQIYSVLLDEARKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGVIR H K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAHFTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 95/217 (43%), Gaps = 56/217 (25%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEKEYFVCSTYQDVYIAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VV---DIKDKQFPDNELIQLIESM----------------LEKDISDNKAIGRNGAQALI 101
V+ +I +K N++ ++I+ + ++K D + +N +++
Sbjct: 58 VLGFREIIEKNLESNKIYEIIKYLASSRPTAVNLFWALERMKKLFEDARNFSQNQIYSVL 117
Query: 102 ------------DLNPRVSK---------LNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+N ++ + N+LTHCN G+LAT YGTALGVIR H
Sbjct: 118 LDEARKIEDEDKSINKKIGEHGNTLIKEGANILTHCNAGALATGGYGTALGVIREAHFTG 177
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
K + + YV E YL AR TA +
Sbjct: 178 KNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|430761100|ref|YP_007216957.1| Methylthioribose-1-phosphate isomerase [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430010724|gb|AGA33476.1| Methylthioribose-1-phosphate isomerase [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 357
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 9/129 (6%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V + + L ++RPTAVN+ A D ++ L A R + E ML DI+ N
Sbjct: 87 VEQAIAQLAASRPTAVNLFWALDRMREVL---ASCPSAGEAHARALAEAERMLAADIAAN 143
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA+ LI+ PG + VLTHCNTGSLAT +GTALGVIRS +I + E
Sbjct: 144 RRLGAAGAE-LIE--PGRA---VLTHCNTGSLATGGFGTALGVIRSAWAQGRIREVFADE 197
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 198 TRPWLQGAR 206
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 95/226 (42%), Gaps = 75/226 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLP---HTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
+++ I Y +L +LDQ LLP H ++ VD V AI+ M VRGAPAI I G
Sbjct: 11 TIRPIRYGDGALYLLDQRLLPGETHENRYVDAAGVA---AAIRDMVVRGAPAIGITAAFG 67
Query: 60 LVV-----------DIKDKQFPDNELIQLIES---------------------------- 80
+V+ D + + + + QL S
Sbjct: 68 VVLACGAAAGSGRADWRGQV--EQAIAQLAASRPTAVNLFWALDRMREVLASCPSAGEAH 125
Query: 81 ---------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
ML DI+ N+ +G GA+ LI+ VLTHCNTGSLAT +GTALG
Sbjct: 126 ARALAEAERMLAADIAANRRLGAAGAE-LIE-----PGRAVLTHCNTGSLATGGFGTALG 179
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
VIRS +I ++ F D E +L AR TA +
Sbjct: 180 VIRSAWAQGRIREV----FAD---------ETRPWLQGARLTAWEL 212
>gi|217076604|ref|YP_002334320.1| methylthioribose-1-phosphate isomerase [Thermosipho africanus
TCF52B]
gi|254813659|sp|B7IFW5.1|MTNA_THEAB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|217036457|gb|ACJ74979.1| methylthioribose-1-phosphate isomerase [Thermosipho africanus
TCF52B]
Length = 346
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D ++ K + E + L + RPTAVN+ A + ++ SL ++ K + + L + ++
Sbjct: 72 DFNAFVKKMEEVKEVLANTRPTAVNLFWALNRMEDSLKKYGK---IEGILEYLEEEAMNI 128
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++DI NKAIGR GA+ L D + VLTHCN G+LAT +YGTALGVIR+ K
Sbjct: 129 AKEDIEVNKAIGRYGAELLKDGD------TVLTHCNAGALATVDYGTALGVIRAAVEQGK 182
Query: 272 IGAAYCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 183 KIKVFADETRPYLQGAR 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 98/238 (41%), Gaps = 69/238 (28%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPD- 71
L ++DQ +P + V + ++ AIK M VRGAPAI G V+ ++ D
Sbjct: 14 ELILIDQRKIPLVEEYVSCKSYKEVAVAIKDMVVRGAPAIGASAAFGYVLGAREMFVEDF 73
Query: 72 NELIQLIESMLE---------------------------------------------KDI 86
N ++ +E + E +DI
Sbjct: 74 NAFVKKMEEVKEVLANTRPTAVNLFWALNRMEDSLKKYGKIEGILEYLEEEAMNIAKEDI 133
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
NKAIGR GA+ L D + VLTHCN G+LAT +YGTALGVIR+ K K
Sbjct: 134 EVNKAIGRYGAELLKDGD------TVLTHCNAGALATVDYGTALGVIRAAVEQGK----K 183
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSLSEWA-KASPVNTV 200
K F D E YL AR TA MK D + ++S W+ K +N V
Sbjct: 184 IKVFAD---------ETRPYLQGARLTAWELMKDGIDVTLISDNMSGWSMKLGKINAV 232
>gi|374997114|ref|YP_004972613.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfosporosinus
orientis DSM 765]
gi|357215480|gb|AET70098.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfosporosinus
orientis DSM 765]
Length = 345
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D L ++ L RPTAVN+ A ++ L E + V+ LI+ +
Sbjct: 67 DLDGLPAFMERVQARLAETRPTAVNLFWALRRMEDRLRECWDMDDIEDVRKVLIEEAGRI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D N+ IG G + + + K N+LTHCN G+LAT EYGTALGVIR+ H A K
Sbjct: 127 AEDDRRMNRLIGEQGKEIIPE------KANILTHCNAGALATVEYGTALGVIRAAHEAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 181 KIHVYADETRPLLQGAR 197
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++SI + +L+IL+Q LP D + E +AI++M+VRGAPAI G V+
Sbjct: 1 MKSIEWLGDALRILNQSKLPAEIVYRDAVSYESVAEAIENMEVRGAPAIGAAVAYGFVLG 60
Query: 63 -----------------------------------------------DIKDKQFPDNELI 75
D+ D + LI
Sbjct: 61 ALEYQGDLDGLPAFMERVQARLAETRPTAVNLFWALRRMEDRLRECWDMDDIEDVRKVLI 120
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ + E D N+ IG G + + + K N+LTHCN G+LAT EYGTALGVIR+
Sbjct: 121 EEAGRIAEDDRRMNRLIGEQGKEIIPE------KANILTHCNAGALATVEYGTALGVIRA 174
Query: 136 LHGANKIVDI 145
H A K + +
Sbjct: 175 AHEAGKKIHV 184
>gi|312793546|ref|YP_004026469.1| translation initiation factor, aif-2bi family [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180686|gb|ADQ40856.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 342
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E ++YL S+RPTAVN+ A + +K E A+ + + + L+Q + ++D S N
Sbjct: 74 IYEIINYLASSRPTAVNLFWALERMKKVFEE-ARNLSQSQIYSLLLQEAMKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGV+R H K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVVREAHFTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 89/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEKEYFVCSTYQDVYIAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD------------------------------------KQFPDNE----------L 74
V+ K+ K F + L
Sbjct: 58 VLGFKEIIEKNMDSAKIYEIINYLASSRPTAVNLFWALERMKKVFEEARNLSQSQIYSLL 117
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + ++D S NK IG +G LI N+LTHCN G+LAT YGTALGV+R
Sbjct: 118 LQEAMKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVVR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
H K + + YV E YL AR TA +
Sbjct: 172 EAHFTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|449546888|gb|EMD37857.1| hypothetical protein CERSUDRAFT_49690 [Ceriporiopsis subvermispora
B]
Length = 363
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 5/138 (3%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL-SEWAKASPVNTVKTRLIQLIESMLEK 214
L+ +V LD+L +ARPTAVN+ A + +L + A + LI +++ +
Sbjct: 83 LQAHVVPLLDFLYTARPTAVNLGAATRRLTHTLDASIAAGKDARAIAEDLIAEGKAIDAE 142
Query: 215 DISDNKAIGRNGAQALIDL--NPGVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
D+ NK + R G + L+D G+S LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 143 DVGRNKEMARWGGEWLVDQYKQRGLSGDNLNVMTVCNTGSLATSGYGTALGLITFLHETG 202
Query: 271 KIGAAYCTETRPYNQGAR 288
++ A+ T++ PY+QG+R
Sbjct: 203 RLERAFFTQSTPYHQGSR 220
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 92/204 (45%), Gaps = 62/204 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M L SI ++I+DQL LPHT+ ++I+ +E A+ AIKSM++RGAPAIA + L
Sbjct: 1 MSGLTSIRITGDKIEIVDQLKLPHTTAFIEIDTIEQAHDAIKSMKIRGAPAIASLAALSF 60
Query: 61 VVDIKD----KQFPD---------NELIQLIE---------------------------- 79
+ PD ++ L++
Sbjct: 61 ASHLSRALNATPAPDYLSSPANLQAHVVPLLDFLYTARPTAVNLGAATRRLTHTLDASIA 120
Query: 80 ------SMLEKDISDNKAI-----GRN------GAQALIDLNPRVS----KLNVLTHCNT 118
++ E I++ KAI GRN G + L+D + LNV+T CNT
Sbjct: 121 AGKDARAIAEDLIAEGKAIDAEDVGRNKEMARWGGEWLVDQYKQRGLSGDNLNVMTVCNT 180
Query: 119 GSLATAEYGTALGVIRSLHGANKI 142
GSLAT+ YGTALG+I LH ++
Sbjct: 181 GSLATSGYGTALGLITFLHETGRL 204
>gi|410658784|ref|YP_006911155.1| Methylthioribose-1-phosphate isomerase [Dehalobacter sp. DCA]
gi|410661773|ref|YP_006914144.1| Methylthioribose-1-phosphate isomerase [Dehalobacter sp. CF]
gi|409021139|gb|AFV03170.1| Methylthioribose-1-phosphate isomerase [Dehalobacter sp. DCA]
gi|409024129|gb|AFV06159.1| Methylthioribose-1-phosphate isomerase [Dehalobacter sp. CF]
Length = 344
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 6/135 (4%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ + Y+ E L RPTAVN+ A ++ E+ + + ++ LI + E
Sbjct: 69 EDFKDYMDEVRTVLEGTRPTAVNLFWALRKMEDKFREFLNMNDIGNIRAALINEANEIAE 128
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
D NK IG G + + K N+LTHCNTGSLAT E+GTALG+IR+ H + K
Sbjct: 129 DDRRMNKRIGEYGNTLIPE------KANILTHCNTGSLATVEFGTALGIIRTAHESGKKI 182
Query: 274 AAYCTETRPYNQGAR 288
+ ETRP QGAR
Sbjct: 183 HVFAGETRPLLQGAR 197
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 72/226 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQV-------------- 46
MK+LQ ++ L ILDQ LP + +I++ ++ +AIK+M+V
Sbjct: 1 MKALQ---WQGDHLLILDQTKLPFVEQYREIHSYKEMAEAIKNMEVRGAPAIGAAAAYGF 57
Query: 47 -------RGA--------------------PAIAIVGCLGLVVDIKDKQFPDNELIQLIE 79
RG+ A+ + L + D K ++F + I I
Sbjct: 58 ALGAAEYRGSGEDFKDYMDEVRTVLEGTRPTAVNLFWALRKMED-KFREFLNMNDIGNIR 116
Query: 80 SML--------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ L E D NK IG G + + K N+LTHCNTGSLAT E+GTALG
Sbjct: 117 AALINEANEIAEDDRRMNKRIGEYGNTLIPE------KANILTHCNTGSLATVEFGTALG 170
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+IR+ H + K + + + GE L AR TA +
Sbjct: 171 IIRTAHESGKKIHV-------------FAGETRPLLQGARLTAWEL 203
>gi|390439359|ref|ZP_10227759.1| Methylthioribose-1-phosphate isomerase [Microcystis sp. T1-4]
gi|389837233|emb|CCI31883.1| Methylthioribose-1-phosphate isomerase [Microcystis sp. T1-4]
Length = 353
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIGR
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAVITKNLLETAHNIQKEDVETCRAIGR 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEIKTDQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIGR+G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGRHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|334340357|ref|YP_004545337.1| translation initiation factor aIF-2BI family [Desulfotomaculum
ruminis DSM 2154]
gi|334091711|gb|AEG60051.1| translation initiation factor, aIF-2BI family [Desulfotomaculum
ruminis DSM 2154]
Length = 350
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 11/135 (8%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ LE GE L + RPTAVN++ A D + LS + S V ++ L++ ++
Sbjct: 74 EKLESIAGE----LGATRPTAVNLRWALDRMMLRLSSAGEKS-VQELRDILLEEAHAIYN 128
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D+ N+ +G G Q D ++ VLTHCN G+LATA YGTALGVIR+ H K
Sbjct: 129 EDVESNRRMGEYGQQLFPD------EVRVLTHCNAGALATAGYGTALGVIRAAHERGKKV 182
Query: 274 AAYCTETRPYNQGAR 288
+ Y ETRP QGAR
Sbjct: 183 SVYADETRPLLQGAR 197
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------G 48
+ +II+E + L++LDQ LP T + ++ N+ +AIK + VR G
Sbjct: 1 MDAIIWEGNRLRLLDQTKLPGTIEYIECNDYYTVAEAIKRLSVRGAPAIGAAAAYGLVVG 60
Query: 49 APAI-------------AIVGCLG----LVVDI----------------KDKQFPDNELI 75
A I +I G LG V++ K Q + L+
Sbjct: 61 AGQIQTEDPKVFLEKLESIAGELGATRPTAVNLRWALDRMMLRLSSAGEKSVQELRDILL 120
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ ++ +D+ N+ +G G Q D ++ VLTHCN G+LATA YGTALGVIR+
Sbjct: 121 EEAHAIYNEDVESNRRMGEYGQQLFPD------EVRVLTHCNAGALATAGYGTALGVIRA 174
Query: 136 LHGANKIVDI 145
H K V +
Sbjct: 175 AHERGKKVSV 184
>gi|222100638|ref|YP_002535206.1| methylthioribose-1-phosphate isomerase [Thermotoga neapolitana DSM
4359]
gi|254813660|sp|B9KA57.1|MTNA_THENN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|221573028|gb|ACM23840.1| methylthioribose-1-phosphate isomerase [Thermotoga neapolitana DSM
4359]
Length = 343
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 100/218 (45%), Gaps = 62/218 (28%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+++ + +SL++LDQ LP + V+ E+ AIK M VRGAPAI + G V+
Sbjct: 6 KTMEWTGNSLRLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRGAPAIGVTAAFGYVLGF 65
Query: 65 KD-----------------------------------KQFPDN----ELIQLIES----M 81
++ K F +N L +++E M
Sbjct: 66 REYRSGDLKEWMKQVKEVLSRTRPTAVNLFWALNRMEKVFLENLKNENLGEILEEEAMKM 125
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
++DI N+AIGRNGA+ + D + +LTHCN G+LAT +YGTALGVIR+ A K
Sbjct: 126 AQEDIETNRAIGRNGAELIEDGS------TILTHCNAGALATVDYGTALGVIRAAVEAGK 179
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
V + F D E YL AR TA + +
Sbjct: 180 RVRV----FAD---------ETRPYLQGARLTAWELMK 204
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 88/170 (51%), Gaps = 33/170 (19%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G LG +++ D L++++ + + L RPTAVN+ A +
Sbjct: 56 TAAFGYVLGF---------------REYRSGD-LKEWMKQVKEVLSRTRPTAVNLFWALN 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGVS 238
++ E N L +++E M ++DI N+AIGRNGA+ + D +
Sbjct: 100 RMEKVFLE-------NLKNENLGEILEEEAMKMAQEDIETNRAIGRNGAELIEDGS---- 148
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCN G+LAT +YGTALGVIR+ A K + ETRPY QGAR
Sbjct: 149 --TILTHCNAGALATVDYGTALGVIRAAVEAGKRVRVFADETRPYLQGAR 196
>gi|392375459|ref|YP_003207292.1| 5-methylthioribose-1-phosphate isomerase [Candidatus
Methylomirabilis oxyfera]
gi|258593152|emb|CBE69463.1| 5-methylthioribose-1-phosphate isomerase (MTNA) [Candidatus
Methylomirabilis oxyfera]
Length = 352
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 10/160 (6%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV ++ A I+ F + D+ GE L RPTAVN+ + +
Sbjct: 50 AIGVAGAMGLALAAQSIQASSFEEFDAELSRHGEALR---RTRPTAVNLAWGIERMLRCA 106
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
+ KA P+ + LI+ + + E+DI DN+AIG G Q LI VLTHCN
Sbjct: 107 QQ-HKALPIAELVEALIREAQQIREEDIRDNRAIGAYG-QGLIP-----DGAAVLTHCNA 159
Query: 249 GSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LATA YGTALGVIR+ H A + + ETRP+ QGAR
Sbjct: 160 GALATAGYGTALGVIRAAHAAGTRLSVWAGETRPFLQGAR 199
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 91/214 (42%), Gaps = 67/214 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG----------------- 56
+++LDQ LP V+ + QAI+SMQ+RGAPAI + G
Sbjct: 13 VRLLDQRRLPAEEVYVECRDAAAVAQAIRSMQIRGAPAIGVAGAMGLALAAQSIQASSFE 72
Query: 57 -------------------CLGLVVDI--------KDKQFPDNELIQLI----ESMLEKD 85
+ L I + K P EL++ + + + E+D
Sbjct: 73 EFDAELSRHGEALRRTRPTAVNLAWGIERMLRCAQQHKALPIAELVEALIREAQQIREED 132
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
I DN+AIG G Q LI VLTHCN G+LATA YGTALGVIR+ H A
Sbjct: 133 IRDNRAIGAYG-QGLIP-----DGAAVLTHCNAGALATAGYGTALGVIRAAHAAGT---- 182
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
L + GE +L AR TA +++
Sbjct: 183 ---------RLSVWAGETRPFLQGARLTAWELQQ 207
>gi|156837345|ref|XP_001642700.1| hypothetical protein Kpol_359p2 [Vanderwaltozyma polyspora DSM
70294]
gi|313471338|sp|A7TSA5.1|MTNA_VANPO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|156113260|gb|EDO14842.1| hypothetical protein Kpol_359p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 415
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 34/162 (20%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ K G +LDYL+S+RPTAVN+ A + L E + + + L + +++
Sbjct: 90 DTRSKLTG-RLDYLLSSRPTAVNLSNALKEIAQILKE---TNDLKQFNSELYNYVCKLID 145
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK------LNVLTHCNTGSLATAEYGTALGVIRSLH 267
+D+S+N +G NGA+ L++ +SK VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 146 EDLSNNIKMGDNGAKFLLE---SLSKEGFNEEFAVLTICNTGSLATSGYGTALGVIRSLW 202
Query: 268 ---------------------GANKIGAAYCTETRPYNQGAR 288
+K+ + ETRPYNQG+R
Sbjct: 203 NDSKSKDPKVNTDGSLKPLASADSKMKHVFPLETRPYNQGSR 244
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I + + + +LDQLLLP+ +K + I + D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIRFARSDPTNVQVSVLDQLLLPYLTKYLPIYTISDGYAVIKSMQVRGAPAIAIVGS 61
Query: 58 LGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGR 94
L ++++ + + Q +L+ + + +K GR
Sbjct: 62 LSILMESQMMLSNSFDQTQWFYDLLDWEDTRSKLTGR 98
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 10/86 (11%)
Query: 67 KQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSK------LNVLTHCNTGS 120
KQF ++EL + ++++D+S+N +G NGA+ L++ +SK VLT CNTGS
Sbjct: 130 KQF-NSELYNYVCKLIDEDLSNNIKMGDNGAKFLLE---SLSKEGFNEEFAVLTICNTGS 185
Query: 121 LATAEYGTALGVIRSLHGANKIVDIK 146
LAT+ YGTALGVIRSL +K D K
Sbjct: 186 LATSGYGTALGVIRSLWNDSKSKDPK 211
>gi|303248218|ref|ZP_07334481.1| translation initiation factor, aIF-2BI family [Desulfovibrio
fructosovorans JJ]
gi|302490356|gb|EFL50267.1| translation initiation factor, aIF-2BI family [Desulfovibrio
fructosovorans JJ]
Length = 347
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 11/131 (8%)
Query: 162 EKLDYLV----SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
EKL+ L+ SARPTAVN++ + ++ E S + + + + L E+M +DI
Sbjct: 76 EKLEGLLTELESARPTAVNLRWGVERMRQKWRELGDIS-LEALLSEWLGLAETMQAEDIE 134
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
NKA+G+NGA ALID V+THCN G+LATA YGTALGVIR+ K
Sbjct: 135 INKAMGKNGA-ALID-----DGDTVMTHCNAGALATAGYGTALGVIRAAFEQGKRIKVIA 188
Query: 278 TETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 189 NETRPFLQGAR 199
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 95/217 (43%), Gaps = 66/217 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV---GCL-------- 58
++H+L +LDQ LP + N D A+++M VRGAPAI + GC
Sbjct: 10 DRHALLLLDQRFLPDREESFVCRNTADTIYALQTMVVRGAPAIGVTAAYGCYLAAREACE 69
Query: 59 ----------GLVVDI-------------------KDKQFPD-------NELIQLIESML 82
GL+ ++ K ++ D +E + L E+M
Sbjct: 70 AGGGWKEKLEGLLTELESARPTAVNLRWGVERMRQKWRELGDISLEALLSEWLGLAETMQ 129
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+DI NKA+G+NGA ALID V+THCN G+LATA YGTALGVIR+
Sbjct: 130 AEDIEINKAMGKNGA-ALID-----DGDTVMTHCNAGALATAGYGTALGVIRA------- 176
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
F ++ E +L AR TA + +
Sbjct: 177 ------AFEQGKRIKVIANETRPFLQGARLTAYELAK 207
>gi|389843173|ref|YP_006345253.1| S-methyl-5-thioribose-1-phosphate isomerase [Mesotoga prima
MesG1.Ag.4.2]
gi|387857919|gb|AFK06010.1| S-methyl-5-thioribose-1-phosphate isomerase [Mesotoga prima
MesG1.Ag.4.2]
Length = 348
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 94/172 (54%), Gaps = 30/172 (17%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA +G LG A +++D D+ D+ + K L +RPTAVN+ A
Sbjct: 56 ATAAFGYLLG-------AKEVLDASDEVLLDHMTTVK------KRLSESRPTAVNLFWAL 102
Query: 182 DSVKSSL-SEWAKASPVNTVKTRLIQLIE----SMLEKDISDNKAIGRNGAQALIDLNPG 236
D ++++L S W + +LI+ +E S+ ++DI NK++GRNGA + D +
Sbjct: 103 DRMENALNSNWGLE------RKKLIESLERAALSIAKEDIEINKSLGRNGATVVRDGD-- 154
Query: 237 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCN G+LAT +YGTALGV+R+ K + ETRPY QGAR
Sbjct: 155 ----GILTHCNAGALATVDYGTALGVMRAAVEQGKRIKIFADETRPYLQGAR 202
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 98/225 (43%), Gaps = 68/225 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
KSL ++ + + LK++DQ LP + V+ N E+ Y AI+ M VRGAPAI G
Sbjct: 4 FKSL-TLEWSEDRLKMIDQRKLPTAEEYVECRNHEEVYVAIREMIVRGAPAIGATAAFGY 62
Query: 61 ------VVDIKDKQFPDN-----------------------------------ELIQLIE 79
V+D D+ D+ E +LIE
Sbjct: 63 LLGAKEVLDASDEVLLDHMTTVKKRLSESRPTAVNLFWALDRMENALNSNWGLERKKLIE 122
Query: 80 SM-------LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
S+ ++DI NK++GRNGA + D + +LTHCN G+LAT +YGTALGV
Sbjct: 123 SLERAALSIAKEDIEINKSLGRNGATVVRDGD------GILTHCNAGALATVDYGTALGV 176
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+R+ K + I + E YL AR TA +
Sbjct: 177 MRAAVEQGKRIKI-------------FADETRPYLQGARLTAWEL 208
>gi|350561185|ref|ZP_08930024.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349781292|gb|EGZ35600.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 357
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ++RPTAVN+ A D +++ L A + + R + + ML DI+ N+ +G G
Sbjct: 94 LEASRPTAVNLFWALDRMRAVL---AACPSADEAEVRTLAEAQRMLAADIAANRRLGAAG 150
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ LI+ PG + VLTHCNTGSLAT +GTALGVIRS +I + ETRP+ QG
Sbjct: 151 AE-LIE--PGRA---VLTHCNTGSLATGGFGTALGVIRSAWAQGRIREVFADETRPWLQG 204
Query: 287 AR 288
AR
Sbjct: 205 AR 206
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+ ML DI+ N+ +G GA+ LI+ VLTHCNTGSLAT +GTALGVIRS
Sbjct: 133 QRMLAADIAANRRLGAAGAE-LIE-----PGRAVLTHCNTGSLATGGFGTALGVIRSAWA 186
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+I ++ + E +L AR TA +
Sbjct: 187 QGRIREV-------------FADETRPWLQGARLTAWEL 212
>gi|189426640|ref|YP_001953817.1| translation initiation factor, aIF-2BI family [Geobacter lovleyi
SZ]
gi|218526617|sp|B3E3M5.1|MTNA_GEOLS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|189422899|gb|ACD97297.1| translation initiation factor, aIF-2BI family [Geobacter lovleyi
SZ]
Length = 346
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/164 (40%), Positives = 92/164 (56%), Gaps = 18/164 (10%)
Query: 129 ALGVIRSLH---GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
A+GV ++ GA +I I D Q +S + + D + RPTAVN+ A + +K
Sbjct: 50 AIGVAAAMGVALGAREI--IADTQ----ESFFRQLENVCDVMARTRPTAVNLFWAIERMK 103
Query: 186 S-SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLT 244
+LS K +P+ T++T L + + +D++ K IGR+GA DL P +LT
Sbjct: 104 QKALS--LKGNPLETIRTGLKEEAIRIEAEDLAICKNIGRHGA----DLIP--EGATILT 155
Query: 245 HCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
HCN G LATA YGTALGVIR+ H A K + ETRP+ QGAR
Sbjct: 156 HCNAGGLATAGYGTALGVIRAAHEAGKRIQVFSDETRPWLQGAR 199
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 85/194 (43%), Gaps = 60/194 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTS---KLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
S ++I + ++ ++DQ LP + D N V +AI+ M VRGAPAI + +G
Sbjct: 2 SFRTIEWRDDAVIMIDQTRLPMEEVYQRYTDFNAVA---EAIRGMVVRGAPAIGVAAAMG 58
Query: 60 -------LVVDIKDKQFPDNE---------------LIQLIESMLEK------------- 84
++ D ++ F E L IE M +K
Sbjct: 59 VALGAREIIADTQESFFRQLENVCDVMARTRPTAVNLFWAIERMKQKALSLKGNPLETIR 118
Query: 85 -------------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
D++ K IGR+GA DL P + +LTHCN G LATA YGTALG
Sbjct: 119 TGLKEEAIRIEAEDLAICKNIGRHGA----DLIPEGA--TILTHCNAGGLATAGYGTALG 172
Query: 132 VIRSLHGANKIVDI 145
VIR+ H A K + +
Sbjct: 173 VIRAAHEAGKRIQV 186
>gi|444319957|ref|XP_004180635.1| hypothetical protein TBLA_0E00550 [Tetrapisispora blattae CBS 6284]
gi|387513678|emb|CCH61116.1| hypothetical protein TBLA_0E00550 [Tetrapisispora blattae CBS 6284]
Length = 418
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 81/150 (54%), Gaps = 28/150 (18%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
+LD+L+S+RPTAVN+ A ++ ++ K + + + L + +++ D+S+N +
Sbjct: 100 RLDFLLSSRPTAVNLSNALKDIRL-IALDPKITSLESFNQFLFTFVCKLVDDDLSNNIKM 158
Query: 223 GRNGAQALID------LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN------ 270
G NGA+ L+D N VLT CNTGSLAT+ YGTALGVIRSL +
Sbjct: 159 GNNGAKFLLDSLKAENFN---EDFAVLTICNTGSLATSGYGTALGVIRSLWNDSQSKVGL 215
Query: 271 ------------KIGAAYCTETRPYNQGAR 288
K+ Y ETRPYNQG+R
Sbjct: 216 LPSEQALSDSKAKLTHVYPLETRPYNQGSR 245
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 3 SLQSIIY-----EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I + +K S+++LDQLLLP+ +K + I N+ D Y IKSMQVRGAPAIAIVG
Sbjct: 2 SLEAIRFNRINPKKISVEVLDQLLLPYVTKYLPIYNISDGYAVIKSMQVRGAPAIAIVGA 61
Query: 58 LGLVVDIK 65
L ++++ +
Sbjct: 62 LSVLLETQ 69
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLN----VLTHCNTGSLATAEYGTA 129
L + +++ D+S+N +G NGA+ L+D + + N VLT CNTGSLAT+ YGTA
Sbjct: 140 LFTFVCKLVDDDLSNNIKMGNNGAKFLLD-SLKAENFNEDFAVLTICNTGSLATSGYGTA 198
Query: 130 LGVIRSL 136
LGVIRSL
Sbjct: 199 LGVIRSL 205
>gi|89895349|ref|YP_518836.1| hypothetical protein DSY2603 [Desulfitobacterium hafniense Y51]
gi|122482316|sp|Q24UA0.1|MTNA_DESHY RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|89334797|dbj|BAE84392.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 345
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 162 EKLDY-LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
EK+ + L RPTAVN+ A ++ L + +A + ++ L+ ES+ E D N+
Sbjct: 76 EKVQHRLAETRPTAVNLFWALRRMEDRLRDQHEAKELAEIRQALVAEAESIAEDDRRVNR 135
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
IG +G A++ ++ N+LTHCN G+LAT EYGTALGVIR+ A K Y ET
Sbjct: 136 LIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGVIRAAQQAGKKVHVYAGET 189
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 190 RPFLQGAR 197
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 93/225 (41%), Gaps = 70/225 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA----------- 49
MK+L+ + SLKILDQ LP K E+ +AI+ M+VRGA
Sbjct: 1 MKALE---WMGDSLKILDQTRLPVEIKYRMAATYEEVAEAIEKMEVRGAPAIGAAAAYGY 57
Query: 50 ------------------------------PAIAIVGCLGLVVDIKDKQFPDNELIQL-- 77
A+ + L + D Q EL ++
Sbjct: 58 ALGAIGYSGELAGLSAHMEKVQHRLAETRPTAVNLFWALRRMEDRLRDQHEAKELAEIRQ 117
Query: 78 -----IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
ES+ E D N+ IG +G A++ ++ N+LTHCN G+LAT EYGTALGV
Sbjct: 118 ALVAEAESIAEDDRRVNRLIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGV 171
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IR+ A K V + Y GE +L AR TA+ +
Sbjct: 172 IRAAQQAGKKVHV-------------YAGETRPFLQGARLTALEL 203
>gi|209527690|ref|ZP_03276187.1| translation initiation factor, aIF-2BI family [Arthrospira maxima
CS-328]
gi|209491862|gb|EDZ92220.1| translation initiation factor, aIF-2BI family [Arthrospira maxima
CS-328]
Length = 368
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D D + + L + RPTAVN+ A + + + E + V+ + L+
Sbjct: 85 RDIQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARE--TSVSVSEIPQVLL 142
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + +D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS
Sbjct: 143 AAAQQIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRS 199
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A ++G Y ETRP QGA+
Sbjct: 200 CKAAQRLGRVYADETRPRLQGAK 222
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ L H +V+I +D +AI +M VRGAPAI I G+ + +D
Sbjct: 27 VIWHEDRVLLIDQTRLSHEYAIVEIKRYKDMARAIATMIVRGAPAIGIAAAYGMYLGARD 86
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q D + L IE ML+
Sbjct: 87 IQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARETSVSVSEIPQVLLAAAQ 146
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS A
Sbjct: 147 QIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAA 203
Query: 140 NKI 142
++
Sbjct: 204 QRL 206
>gi|222529351|ref|YP_002573233.1| translation initiation factor [Caldicellulosiruptor bescii DSM
6725]
gi|222456198|gb|ACM60460.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
bescii DSM 6725]
Length = 342
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E ++YL S+RPTAVN+ A + +K E AK + + + L+ + ++D S N
Sbjct: 74 IYEIINYLASSRPTAVNLFWALERMKKIFEE-AKNLSQSQIYSLLLDEARKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGVIR H K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAHFTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 89/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEREYFVCSTYHDVYVAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD---KQFPDNELIQLIESM-------------LEK-------------------- 84
V+ K+ K ++ ++I + LE+
Sbjct: 58 VLGFKEIIEKNMESTKIYEIINYLASSRPTAVNLFWALERMKKIFEEAKNLSQSQIYSLL 117
Query: 85 ----------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
D S NK IG +G LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 LDEARKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
H K + + YV E YL AR TA +
Sbjct: 172 EAHFTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|390602485|gb|EIN11878.1| eukaryotic translation initiation factor 2B [Punctularia
strigosozonata HHB-11173 SS5]
Length = 393
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 11/136 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML-------EKDI 216
LDYL +ARPTAVN+ A + + L+ + S + + +L + ++ E+D+
Sbjct: 91 LDYLWTARPTAVNLGAATSRLSAVLNHGVEKSGGHGGEQEARELAQEVIREGIAIDEEDV 150
Query: 217 SDNKAIGRNGAQALIDL--NPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
N+ +G++GA LI+ + G S LNV+T CNTGSLAT+ YGTALG+I L+ K+
Sbjct: 151 GRNREMGKHGATWLIEQVESAGSSGEGLNVMTVCNTGSLATSGYGTALGLITRLYETGKL 210
Query: 273 GAAYCTETRPYNQGAR 288
AY T++ PY+QG+R
Sbjct: 211 NRAYFTQSTPYHQGSR 226
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
++I++QLLLPHT + ++I+ VE A+ AI+SM++RGAPAIA + L
Sbjct: 16 IEIINQLLLPHTEEWIEIDTVEKAWDAIRSMKIRGAPAIASLAAL 60
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 83 EKDISDNKAIGRNGAQALID----LNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E+D+ N+ +G++GA LI+ LNV+T CNTGSLAT+ YGTALG+I L+
Sbjct: 147 EEDVGRNREMGKHGATWLIEQVESAGSSGEGLNVMTVCNTGSLATSGYGTALGLITRLYE 206
Query: 139 ANKI 142
K+
Sbjct: 207 TGKL 210
>gi|383316401|ref|YP_005377243.1| S-methyl-5-thioribose-1-phosphate isomerase [Frateuria aurantia DSM
6220]
gi|379043505|gb|AFC85561.1| S-methyl-5-thioribose-1-phosphate isomerase [Frateuria aurantia DSM
6220]
Length = 341
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 80/127 (62%), Gaps = 13/127 (10%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ L L +ARPTAVN+ A D +++ + A + V + TR QLI+ ++D++ N+
Sbjct: 82 QALARLRAARPTAVNLMWALDRMQALI---AGGASVEAL-TREAQLIQ---DQDLAGNRH 134
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+G GA ALI+ GV +THCNTGSLAT+ +GTALGV+R+ A +I Y ETR
Sbjct: 135 MGELGA-ALIEPGSGV-----MTHCNTGSLATSGFGTALGVVRAGVAAGRISQVYAGETR 188
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 189 PWLQGAR 195
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 54/214 (25%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
S++++ + H+L +LDQ LLP + + + +AI+ + VRGAPAI I G+
Sbjct: 9 FDSIRAVQWRDHALHLLDQRLLPQQEAWIACTDADQVTEAIRDLVVRGAPAIGIAAAWGV 68
Query: 61 VVDIKDKQ----------------------FPDNELIQLI-----------ESML--EKD 85
V+ Q + + + LI E+ L ++D
Sbjct: 69 VLAASQHQGEALQQALARLRAARPTAVNLMWALDRMQALIAGGASVEALTREAQLIQDQD 128
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
++ N+ +G GA ALI+ V+THCNTGSLAT+ +GTALGV+R+ A +I +
Sbjct: 129 LAGNRHMGELGA-ALIEPGS-----GVMTHCNTGSLATSGFGTALGVVRAGVAAGRISQV 182
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
Y GE +L AR T + R
Sbjct: 183 -------------YAGETRPWLQGARLTMWELVR 203
>gi|312622407|ref|YP_004024020.1| translation initiation factor, aif-2bi family [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202874|gb|ADQ46201.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
kronotskyensis 2002]
Length = 342
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
A YG LG K+ + D + E ++ L S+RPTAVN+ A +
Sbjct: 52 VAAYGVVLGF---------------KEIIEKDMESTKIYEVINILASSRPTAVNLFWALE 96
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+K E AK + + + L+Q + ++D S NK IG +G LI N+
Sbjct: 97 RMKKIFEE-AKNLSQSQIYSLLLQEARKIEDEDKSINKKIGEHG-NTLIK-----EGANI 149
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN G+LAT YGTALGVIR H K Y ETRPY QGAR
Sbjct: 150 LTHCNAGALATGGYGTALGVIREAHFTGKNIHVYVDETRPYLQGAR 195
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 88/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEKEYFVCSTYQDVYVAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKDKQFPDNE----------------------------------------------L 74
V+ K+ D E L
Sbjct: 58 VLGFKEIIEKDMESTKIYEVINILASSRPTAVNLFWALERMKKIFEEAKNLSQSQIYSLL 117
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + ++D S NK IG +G LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 LQEARKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
H K + + YV E YL AR TA +
Sbjct: 172 EAHFTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|327401661|ref|YP_004342500.1| methylthioribose-1-phosphate isomerase [Archaeoglobus veneficus
SNP6]
gi|327317169|gb|AEA47785.1| Methylthioribose-1-phosphate isomerase [Archaeoglobus veneficus
SNP6]
Length = 343
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
++ F D L+++V ++L S RPTAVN+ + V L + V V+ +
Sbjct: 62 ERDFSSVDELKEHVKRAAEFLASTRPTAVNLFYGIERV---LKAAMDGNSVEEVRQLALS 118
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS- 265
E + ++D+ NK +G++GA+ L D VLT+CNTG LAT ++GTALGVIRS
Sbjct: 119 EAEKIADEDVERNKQMGKHGAKLLED------GFTVLTYCNTGRLATVDWGTALGVIRSA 172
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ KI C ETRP NQG+R
Sbjct: 173 VEEGKKIKVIAC-ETRPLNQGSR 194
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 52/174 (29%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDK 67
I+ +K++DQ LLP ++++ VE+ AIK + VRGAPA+ G G+ + ++
Sbjct: 4 IFWDGCVKLIDQTLLPDKFEIIECRRVEELADAIKRLAVRGAPALEAAGGYGVALAAHER 63
Query: 68 QFPD------------------------------------------NELIQLIESMLEK- 84
F E+ QL S EK
Sbjct: 64 DFSSVDELKEHVKRAAEFLASTRPTAVNLFYGIERVLKAAMDGNSVEEVRQLALSEAEKI 123
Query: 85 ---DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
D+ NK +G++GA+ L D VLT+CNTG LAT ++GTALGVIRS
Sbjct: 124 ADEDVERNKQMGKHGAKLLED------GFTVLTYCNTGRLATVDWGTALGVIRS 171
>gi|146296928|ref|YP_001180699.1| putative translation initiation factor, aIF-2BI family
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|218526594|sp|A4XKS3.1|MTNA_CALS8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|145410504|gb|ABP67508.1| putative translation initiation factor, aIF-2BI family
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 342
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E L+YL ++RPTAVN+ A + +K E A+ + + + L+Q + + ++D S N
Sbjct: 74 IYEILNYLANSRPTAVNLFWALERMKKVFEE-ARNLSKSQIYSLLMQEAKKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGVIR A K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAFFAGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 90/223 (40%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEKEYFVCSTYQDVYIAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD------------------------------------KQFPDNE----------L 74
V+ K+ K F + L
Sbjct: 58 VLGFKEIIEKNMDSAKIYEILNYLANSRPTAVNLFWALERMKKVFEEARNLSKSQIYSLL 117
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + + ++D S NK IG +G LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 MQEAKKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
A K + + YV E YL AR TA +
Sbjct: 172 EAFFAGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|150020159|ref|YP_001305513.1| aIF-2BI family translation initiation factor [Thermosipho
melanesiensis BI429]
gi|218526933|sp|A6LJM7.1|MTNA_THEM4 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|149792680|gb|ABR30128.1| putative translation initiation factor, aIF-2BI family [Thermosipho
melanesiensis BI429]
Length = 346
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 91/171 (53%), Gaps = 30/171 (17%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A+A +G LG ++K D ++ + + E + L + RPTAVN+ A
Sbjct: 55 ASAAFGYVLGA-------------REKFVEDFEAFVEKMREVKEVLANTRPTAVNLFWAL 101
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGV 237
+ ++++L ++ K V ++ +E+ + ++DI N AIGR GAQ L D +
Sbjct: 102 NRMENALRKYGKVEGV-------LEFLENEALNIAKEDIEVNMAIGRYGAQLLKDGD--- 151
Query: 238 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT +YGTALGVIR+ K + ETRPY QGAR
Sbjct: 152 ---TVLTHCNAGALATVDYGTALGVIRAAVEQGKRIKVFADETRPYLQGAR 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 95/240 (39%), Gaps = 73/240 (30%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
L ++DQ +P + + ++ AIK M VRGAPAI G V+ ++K D
Sbjct: 14 ELILIDQRKIPLKEEYMSCKTYKEVALAIKEMVVRGAPAIGASAAFGYVLGAREKFVEDF 73
Query: 73 ELIQLIESMLE------------------------------------------------K 84
E +E M E +
Sbjct: 74 E--AFVEKMREVKEVLANTRPTAVNLFWALNRMENALRKYGKVEGVLEFLENEALNIAKE 131
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVD 144
DI N AIGR GAQ L D + VLTHCN G+LAT +YGTALGVIR+ K +
Sbjct: 132 DIEVNMAIGRYGAQLLKDGD------TVLTHCNAGALATVDYGTALGVIRAAVEQGKRI- 184
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSLSEWA-KASPVNTV 200
K F D E YL AR TA MK D + ++S WA K +N V
Sbjct: 185 ---KVFAD---------ETRPYLQGARLTAWELMKDGIDVTLISDNMSGWAMKLGKINAV 232
>gi|320583927|gb|EFW98140.1| Methylthioribose-1-phosphate isomerase [Ogataea parapolymorpha
DL-1]
Length = 408
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 15/161 (9%)
Query: 140 NKIVDIKDKQFPDN-DSLEKY---VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS 195
+++++ D F N D L ++ + +++D LV +RPTAVN+ + +K + +
Sbjct: 74 DRVINKNDNPFGYNKDDLAEFKAQLEKRIDLLVESRPTAVNLLNGCNEMKKIIQD---KQ 130
Query: 196 PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL---IDLNPGVSKLNVLTHCNTGSLA 252
+ + + L + + D+ N +IG NG + + ++ + +V+T CNTGSLA
Sbjct: 131 SLKELYSGLFDFTVKLYKDDLESNYSIGANGVKYIYQELEKEGFTGEFSVMTICNTGSLA 190
Query: 253 TAEYGTALGVIRSLH-----GANKIGAAYCTETRPYNQGAR 288
T+ YGTALG+IR+LH + ++ Y ETRPYNQG+R
Sbjct: 191 TSGYGTALGIIRALHQEARSNSTRMSHVYACETRPYNQGSR 231
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 69/204 (33%)
Query: 3 SLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVE--------DAYQAIKSMQVRGAPAI 52
SL++I ++ +L+IL+QLL+P+ ++ + + ++ Y+AIK M RGAPAI
Sbjct: 2 SLEAIKFDSQRVTLEILNQLLVPYDTQYLSVGSMAPCDADTSFSGYEAIKGMYTRGAPAI 61
Query: 53 AIVGCLGL------VVDIKDKQF-------------------------PD--------NE 73
+VGC + V++ D F P NE
Sbjct: 62 MLVGCFSVVVELDRVINKNDNPFGYNKDDLAEFKAQLEKRIDLLVESRPTAVNLLNGCNE 121
Query: 74 LIQLIE-----------------SMLEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVL 113
+ ++I+ + + D+ N +IG NG + + ++ + +V+
Sbjct: 122 MKKIIQDKQSLKELYSGLFDFTVKLYKDDLESNYSIGANGVKYIYQELEKEGFTGEFSVM 181
Query: 114 THCNTGSLATAEYGTALGVIRSLH 137
T CNTGSLAT+ YGTALG+IR+LH
Sbjct: 182 TICNTGSLATSGYGTALGIIRALH 205
>gi|154250194|ref|YP_001411019.1| aIF-2BI family translation initiation factor [Fervidobacterium
nodosum Rt17-B1]
gi|218526616|sp|A7HN79.1|MTNA_FERNB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|154154130|gb|ABS61362.1| putative translation initiation factor, aIF-2BI family
[Fervidobacterium nodosum Rt17-B1]
Length = 350
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 88/174 (50%), Gaps = 34/174 (19%)
Query: 122 ATAEYGTALG---VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
ATA +G LG +++ H ++V ++ K + L RPTAVN+
Sbjct: 55 ATAAFGYVLGAKEILKKSHNYEQVV-MQMKNVKET-------------LAKTRPTAVNLF 100
Query: 179 RAADSVKSSLSEWAKASPVNTVKTRLIQLIE----SMLEKDISDNKAIGRNGAQALIDLN 234
A + ++ L K L++++E + ++DI NKAIGRNGAQ L D
Sbjct: 101 WALERMEKRLIRHGKYEG-------LVKVLEDEALKIAKEDIEVNKAIGRNGAQLLQD-- 151
Query: 235 PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT +YGTALGV+R+ K Y ETRPY QGAR
Sbjct: 152 ----GFTVLTHCNAGALATVDYGTALGVLRAAKEQGKKIKVYADETRPYLQGAR 201
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 96/240 (40%), Gaps = 71/240 (29%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
SL ++DQ LP V + +IK M VRGAPAI G V+ K+
Sbjct: 14 SLILIDQRRLPFEEVYVTCADYRAVALSIKEMVVRGAPAIGATAAFGYVLGAKEILKKSH 73
Query: 67 -----------------KQFPD---------------------NELIQLIE----SMLEK 84
K P L++++E + ++
Sbjct: 74 NYEQVVMQMKNVKETLAKTRPTAVNLFWALERMEKRLIRHGKYEGLVKVLEDEALKIAKE 133
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVD 144
DI NKAIGRNGAQ L D VLTHCN G+LAT +YGTALGV+R+ K +
Sbjct: 134 DIEVNKAIGRNGAQLLQD------GFTVLTHCNAGALATVDYGTALGVLRAAKEQGKKIK 187
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAADS--VKSSLSEWA-KASPVNTV 200
+ Y E YL AR TA MK D + +++ W K +N V
Sbjct: 188 V-------------YADETRPYLQGARLTAWELMKDGFDVTLISDNMAGWVMKQGKINAV 234
>gi|425470672|ref|ZP_18849532.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9701]
gi|389883610|emb|CCI36010.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9701]
Length = 359
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIGR
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SEPEVAIITKNLLETAHNIQKEDVETCRAIGR 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 DIKD------KQFPDN----------------ELIQLIESMLE----------------- 83
++ +QF + L IE ML+
Sbjct: 70 GAQEIKTNQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESEPEVAIITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIGR+G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGRHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|376006908|ref|ZP_09784116.1| methylthioribose-1-phosphate isomerase [Arthrospira sp. PCC 8005]
gi|375324717|emb|CCE19869.1| methylthioribose-1-phosphate isomerase [Arthrospira sp. PCC 8005]
Length = 368
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D D + + L + RPTAVN+ A + + + E + V+ + L+
Sbjct: 85 RDIQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARE--TSVSVSEIPQVLL 142
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + +D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS
Sbjct: 143 AAAQQIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRS 199
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A ++G Y ETRP QGA+
Sbjct: 200 CKAAQRLGRVYADETRPRLQGAK 222
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ L H +V+I ED +AI +M VRGAPAI I G+ + +D
Sbjct: 27 VIWHEDRVLLIDQTRLSHEYAIVEIKRYEDMARAIATMIVRGAPAIGIAAAYGMYLGARD 86
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q D + L IE ML+
Sbjct: 87 IQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARETSVSVSEIPQVLLAAAQ 146
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS A
Sbjct: 147 QIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAA 203
Query: 140 NKI 142
++
Sbjct: 204 QRL 206
>gi|423064254|ref|ZP_17053044.1| putative translation initiation factor IF-2B subunit alpha
[Arthrospira platensis C1]
gi|406713497|gb|EKD08665.1| putative translation initiation factor IF-2B subunit alpha
[Arthrospira platensis C1]
Length = 368
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D D + + L + RPTAVN+ A + + + E + V+ + L+
Sbjct: 85 RDIQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARE--TSVSVSEIPQVLL 142
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + +D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS
Sbjct: 143 AAAQQIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRS 199
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A ++G Y ETRP QGA+
Sbjct: 200 CKAAQRLGRVYADETRPRLQGAK 222
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ L H +V+I ED +AI +M VRGAPAI I G+ + +D
Sbjct: 27 VIWHEDRVLLIDQTRLSHEYAIVEIKRYEDMARAIATMIVRGAPAIGIAAAYGMYLGARD 86
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q D + L IE ML+
Sbjct: 87 IQKSDRDGFLAELKGVAEILGNTRPTAVNLFWAIERMLKTARETSVSVSEIPQVLLAAAQ 146
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS A
Sbjct: 147 QIQAEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAA 203
Query: 140 NKI 142
++
Sbjct: 204 QRL 206
>gi|387129949|ref|YP_006292839.1| Methylthioribose-1-phosphate isomerase [Methylophaga sp. JAM7]
gi|386271238|gb|AFJ02152.1| Methylthioribose-1-phosphate isomerase [Methylophaga sp. JAM7]
Length = 353
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 11/123 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNT-VKTRLIQLIESMLEKDISDNKAIGRN 225
L +RPTAVN++ A + ++ + A P N + L+ +++ + DI+DNK +GR
Sbjct: 90 LAVSRPTAVNLQWAINHMQRRID----ALPNNQQPEAVLLDAAKAIHDADITDNKTMGRL 145
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA+ + PG + VLTHCN G+LAT +GTALGVIR H KI Y ETRP+ Q
Sbjct: 146 GAELI---QPGST---VLTHCNAGALATGGFGTALGVIRQAHSEGKISRVYVDETRPWLQ 199
Query: 286 GAR 288
GAR
Sbjct: 200 GAR 202
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 64 IKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLAT 123
+ + Q P+ L+ +++ + DI+DNK +GR GA+ LI VLTHCN G+LAT
Sbjct: 114 LPNNQQPEAVLLDAAKAIHDADITDNKTMGRLGAE-LIQPGS-----TVLTHCNAGALAT 167
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+GTALGVIR H KI + YV E +L AR TA + R
Sbjct: 168 GGFGTALGVIRQAHSEGKISRV-------------YVDETRPWLQGARLTAWELMR 210
>gi|434400333|ref|YP_007134337.1| methylthioribose-1-phosphate isomerase [Stanieria cyanosphaera PCC
7437]
gi|428271430|gb|AFZ37371.1| methylthioribose-1-phosphate isomerase [Stanieria cyanosphaera PCC
7437]
Length = 354
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I++ + ++DQ LP +V+I+ ED QAI++M VRGAPAI + G+ + K+
Sbjct: 12 VIWQNDKVFLIDQTRLPGEYSVVEISLCEDMAQAIRTMIVRGAPAIGVAAAYGMYLGAKE 71
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q + E L I ML+
Sbjct: 72 IQTTNREVFLKKLEKIAQLLRETRPTAVNLFWAISRMLKIAYESVGNVEQIKAILLETAQ 131
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D+ +AIG NG LI L +KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 132 AIQLEDLKTCQAIGDNG---LIVLPSEPTKLTILTHCNTGSLATAGYGTALGVIRSAWRE 188
Query: 140 NKIVDI 145
N++ +
Sbjct: 189 NRLARV 194
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG + + N+ V +K LEK L RPTAVN+ A
Sbjct: 61 AAYGMYLGA-KEIQTTNREVFLKK--------LEKIA----QLLRETRPTAVNLFWAISR 107
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ E V +K L++ +++ +D+ +AIG NG LI L +KL +L
Sbjct: 108 MLKIAYE--SVGNVEQIKAILLETAQAIQLEDLKTCQAIGDNG---LIVLPSEPTKLTIL 162
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTGSLATA YGTALGVIRS N++ Y ETRP QGA+
Sbjct: 163 THCNTGSLATAGYGTALGVIRSAWRENRLARVYADETRPRLQGAK 207
>gi|312199573|ref|YP_004019634.1| translation initiation factor, aIF-2BI family [Frankia sp. EuI1c]
gi|311230909|gb|ADP83764.1| translation initiation factor, aIF-2BI family [Frankia sp. EuI1c]
Length = 357
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 41/179 (22%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV- 61
+L+ + + S+++LDQ LLP ++I+ V+D AI+ + VRGAPA+ I G G+
Sbjct: 24 ALRPVAWAGGSIRLLDQTLLPDRLADLEIHRVDDLIAAIRRLAVRGAPALGIAGAYGVAL 83
Query: 62 -----------------------------------VDIKDKQFPD--NELIQLIESMLEK 84
VD + D + ++ + ++ +
Sbjct: 84 AIVQAAREGWDGSTFTAAVGRLRAARPTAVALAQGVDAAYARIDDGLDAVVAVGGALADA 143
Query: 85 DISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
D N+AIGR+GA ++ L R L VLTHCNTG+LATA +GTALG+IR LH ++
Sbjct: 144 DERANRAIGRHGADWILARLGDR--PLRVLTHCNTGALATAAWGTALGIIRELHARGRV 200
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 25/163 (15%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG AL ++++ ++ D + VG L +ARPTAV + + D+
Sbjct: 79 YGVALAIVQAA-----------REGWDGSTFTAAVGR----LRAARPTAVALAQGVDAAY 123
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+ + + A ++ + ++ + D N+AIGR+GA ++ G L VLTH
Sbjct: 124 ARIDDGLDA---------VVAVGGALADADERANRAIGRHGADWIL-ARLGDRPLRVLTH 173
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CNTG+LATA +GTALG+IR LH ++ Y ETRP QG+R
Sbjct: 174 CNTGALATAAWGTALGIIRELHARGRVELVYVDETRPLLQGSR 216
>gi|94500963|ref|ZP_01307488.1| translation initiation factor IF-2B subunit alpha [Bermanella
marisrubri]
gi|94426903|gb|EAT11886.1| translation initiation factor IF-2B subunit alpha [Oceanobacter sp.
RED65]
Length = 358
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query: 158 KYVGEKLDY------LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ +G + DY L ++RPTA+N+ A + V + E ++ + + L + +
Sbjct: 71 RKLGPRGDYKSIINELSASRPTAINLFWAIERVSEEI-EQSRQLSNDAFYDHVFDLAQRI 129
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++DI N+ +GR G+ + + +NV+THCN G+LAT YGTALGVIRSLH +
Sbjct: 130 HKEDILANQQMGRYGSDFI--ASKTNKPINVITHCNAGALATGGYGTALGVIRSLHEDRR 187
Query: 272 IGAAYCTETRPYNQGAR 288
+ AY +ETRP+ QGAR
Sbjct: 188 LNQAYASETRPWLQGAR 204
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 103/225 (45%), Gaps = 59/225 (26%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC-------- 57
+II++ H L +LDQ +LP K ++ ++ AIK+M VRGAPAI I
Sbjct: 12 AIIWQDHKLLLLDQRILPQEIKYIECSDASAVANAIKNMVVRGAPAIGISAAYALALAAR 71
Query: 58 -LGLVVDIKD-----------------------------KQFPDN----ELIQLIESMLE 83
LG D K +Q ++ + L + + +
Sbjct: 72 KLGPRGDYKSIINELSASRPTAINLFWAIERVSEEIEQSRQLSNDAFYDHVFDLAQRIHK 131
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
+DI N+ +GR G+ + + +NV+THCN G+LAT YGTALGVIRSLH
Sbjct: 132 EDILANQQMGRYGSDFIASKTNK--PINVITHCNAGALATGGYGTALGVIRSLH------ 183
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+D++ + Y E +L AR TA + + + +K++L
Sbjct: 184 --EDRRLN-----QAYASETRPWLQGARLTAFELMQ--EQIKTTL 219
>gi|399154759|ref|ZP_10754826.1| translation initiation factor, aIF-2BI family protein [gamma
proteobacterium SCGC AAA007-O20]
Length = 352
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D K + + L+ +RPTA+N+ A D ++S ++E +P T L + E +L
Sbjct: 75 DEFSKGMEQAFKILLQSRPTAINLFWAVDRMRSKMNENISLTPKEIANTLLSEAHE-ILS 133
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI N+ +G GA+ L D VLTHCN G+LATA +GTALGVIRS A K
Sbjct: 134 EDIEINRKMGSFGAELLSD------GARVLTHCNAGALATAGHGTALGVIRSAVEAGKKI 187
Query: 274 AAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 188 SVIADETRPFLQGAR 202
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 90/223 (40%), Gaps = 69/223 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + L+++DQ +LP + + N+ I+SM VRGAPAI G+ ++
Sbjct: 6 IETLRWADDHLEMIDQRILPADFQYISYNSASSVADGIRSMVVRGAPAIGCAAAYGVALE 65
Query: 64 ---IKDKQFPD---------------------------------------------NELI 75
++D + N L+
Sbjct: 66 ALNLQDASMDEFSKGMEQAFKILLQSRPTAINLFWAVDRMRSKMNENISLTPKEIANTLL 125
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+L +DI N+ +G GA+ L D VLTHCN G+LATA +GTALGVIRS
Sbjct: 126 SEAHEILSEDIEINRKMGSFGAELLSD------GARVLTHCNAGALATAGHGTALGVIRS 179
Query: 136 -LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ KI I D+ P +L AR TA M
Sbjct: 180 AVEAGKKISVIADETRP--------------FLQGARLTAWEM 208
>gi|241823922|ref|XP_002416608.1| conserved hypothetical protein [Ixodes scapularis]
gi|215511072|gb|EEC20525.1| conserved hypothetical protein [Ixodes scapularis]
Length = 159
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 6/143 (4%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+ ++ +L A+++ + K + L +V E+L +L ++RPTAVN+ A+ +++
Sbjct: 15 AIAIVGALSLASELHEDK-APWTSKQELSSHVAERLAHLETSRPTAVNLANMANELRALA 73
Query: 189 SEWAKASPVNT--VKTRLIQLIESMLEKDISDNKAIGRNGAQALI-DLNP--GVSKLNVL 243
+ K + V+ +K RL E ML +D+S NKA+GR+GA+ L+ P G + L VL
Sbjct: 74 ARLEKDNSVSLQDMKHRLADEAEKMLAEDLSANKAMGRHGAEHLLAHCKPPQGAAGLGVL 133
Query: 244 THCNTGSLATAEYGTALGVIRSL 266
THCNTGSLATA +GTALG R L
Sbjct: 134 THCNTGSLATAGHGTALGRRRLL 156
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 67/149 (44%), Gaps = 56/149 (37%)
Query: 44 MQVRGAPAIAIVGCLGLVVDIKDKQFP-------------------------------DN 72
+QVRGAPAIAIVG L L ++ + + P N
Sbjct: 8 VQVRGAPAIAIVGALSLASELHEDKAPWTSKQELSSHVAERLAHLETSRPTAVNLANMAN 67
Query: 73 ELIQLI----------------------ESMLEKDISDNKAIGRNGAQALI-DLNPR--V 107
EL L E ML +D+S NKA+GR+GA+ L+ P
Sbjct: 68 ELRALAARLEKDNSVSLQDMKHRLADEAEKMLAEDLSANKAMGRHGAEHLLAHCKPPQGA 127
Query: 108 SKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ L VLTHCNTGSLATA +GTALG R L
Sbjct: 128 AGLGVLTHCNTGSLATAGHGTALGRRRLL 156
>gi|119714668|ref|YP_921633.1| translation initiation factor 2B subunit I [Nocardioides sp. JS614]
gi|119535329|gb|ABL79946.1| translation initiation factor 2B subunit I family (IF-2BI)
[Nocardioides sp. JS614]
Length = 344
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 54/209 (25%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK--DK 67
+ ++++LDQ LLP + +D++ V+ AI+S+ VRGAPA+ VG LG+VV ++ ++
Sbjct: 10 DAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGVVVAMRQAER 69
Query: 68 QFPDNELIQ------------------------------------LIESMLEKDISDNKA 91
+ D+E +Q + ++++E+D + N+
Sbjct: 70 EGWDDERLQVEVDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVVEEDEAANRT 129
Query: 92 IGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFP 151
+ R GA ++ R ++ V+THCNTG+LAT+ +GTA G+I LH
Sbjct: 130 LSRLGADWILGRTGR-ERVRVVTHCNTGALATSAWGTAYGIIHELH-------------- 174
Query: 152 DNDSLE-KYVGEKLDYLVSARPTAVNMKR 179
D +LE YV E L AR T+ + R
Sbjct: 175 DRGALEVVYVDETRPLLQGARLTSWELTR 203
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 21/160 (13%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
ALGV+ ++ A +++ D++ L+ V D + ARPTAVN+ D V++++
Sbjct: 57 ALGVVVAMRQA-------EREGWDDERLQVEV----DRIRLARPTAVNLAWGVDQVRAAM 105
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
+ P +K + ++++E+D + N+ + R GA ++ G ++ V+THCNT
Sbjct: 106 ----PSGPETVLK-----MAKAVVEEDEAANRTLSRLGADWILG-RTGRERVRVVTHCNT 155
Query: 249 GSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LAT+ +GTA G+I LH + Y ETRP QGAR
Sbjct: 156 GALATSAWGTAYGIIHELHDRGALEVVYVDETRPLLQGAR 195
>gi|28199803|ref|NP_780117.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa
Temecula1]
gi|182682555|ref|YP_001830715.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa M23]
gi|386083887|ref|YP_006000169.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417559039|ref|ZP_12209993.1| Translation initiation factor eIF-2B alpha subunit [Xylella
fastidiosa EB92.1]
gi|32129497|sp|Q87A92.1|MTNA_XYLFT RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526954|sp|B2I9S0.1|MTNA_XYLF2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|28057924|gb|AAO29766.1| translation initiation factor EIF-2B [Xylella fastidiosa Temecula1]
gi|182632665|gb|ACB93441.1| translation initiation factor, aIF-2BI family [Xylella fastidiosa
M23]
gi|307578834|gb|ADN62803.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338178307|gb|EGO81298.1| Translation initiation factor eIF-2B alpha subunit [Xylella
fastidiosa EB92.1]
Length = 354
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 65/229 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ H LK+LDQ LP + V+ ++ ED QAI+++ VRGAPAI IV G V+
Sbjct: 15 VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLA 74
Query: 64 IKDKQFPDN----------------------------------------ELIQLIE---- 79
++ + D + Q++E
Sbjct: 75 AREIEAVDGIEALCKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMECEAE 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
S+ +D++ N+ +G GA ALI + VLTHCNTGSLATA +GTALGVIR
Sbjct: 135 SIAREDLTANRCMGAYGA-ALIPIGS-----GVLTHCNTGSLATAGFGTALGVIRDGIAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+I + +VGE +L AR T +++ D + ++L
Sbjct: 189 GRIARV-------------FVGETRPWLQGARLTVWELQQ--DGIDATL 222
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 71/129 (55%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS----EWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L +ARPTAVN+ ++ +LS +W + ES+ +D++ N
Sbjct: 94 LQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMECEA---------ESIAREDLTAN 144
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA ALI + GV LTHCNTGSLATA +GTALGVIR +I + E
Sbjct: 145 RCMGAYGA-ALIPIGSGV-----LTHCNTGSLATAGFGTALGVIRDGIAQGRIARVFVGE 198
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 199 TRPWLQGAR 207
>gi|403213918|emb|CCK68420.1| hypothetical protein KNAG_0A07670 [Kazachstania naganishii CBS
8797]
Length = 413
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 25/156 (16%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
+++ + E+LDYL+ +RPTAVN+ + +V + L ++ S N+ +L ++++
Sbjct: 90 AIQTRLSERLDYLLLSRPTAVNLSNSLKNVSALLMSSSELSAFNS---QLFTYACNLIDD 146
Query: 215 DISDNKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSL----- 266
D+++N +G NGA+ +++ S VLT CNTGSLAT+ YGTALGVIRSL
Sbjct: 147 DLANNTKMGDNGARFILESLENESYNDDFAVLTICNTGSLATSGYGTALGVIRSLWKDSQ 206
Query: 267 --------------HGANKIGAAYCTETRPYNQGAR 288
+ K+ Y ETRPYNQG+R
Sbjct: 207 NKSQKSVKKTKTLSNSKAKLTHVYPLETRPYNQGSR 242
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 10/95 (10%)
Query: 3 SLQSIIYEKH-----SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
SL++I +++ S+K+L+QL+LP+ + + I+ + D + I SMQVRGAPAIAIVG
Sbjct: 2 SLEAIKFDRSNPKDVSVKVLNQLVLPYATTYIPIHTINDGFGVISSMQVRGAPAIAIVGV 61
Query: 58 LGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAI 92
L +++ + Q NE E+ D S+ KAI
Sbjct: 62 LSILL---ETQLLANEYFA--ETQCFYDTSNWKAI 91
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Query: 71 DNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYG 127
+++L ++++ D+++N +G NGA+ +++ S VLT CNTGSLAT+ YG
Sbjct: 133 NSQLFTYACNLIDDDLANNTKMGDNGARFILESLENESYNDDFAVLTICNTGSLATSGYG 192
Query: 128 TALGVIRSL 136
TALGVIRSL
Sbjct: 193 TALGVIRSL 201
>gi|312135174|ref|YP_004002512.1| translation initiation factor, aif-2bi family [Caldicellulosiruptor
owensensis OL]
gi|311775225|gb|ADQ04712.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
owensensis OL]
Length = 342
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 74/129 (57%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E +++L S+RPTAVN+ A + +K E A+ + + + L+Q + ++D S N
Sbjct: 74 IYEVINFLASSRPTAVNLFWALERMKKVF-EKARNLSQSQIYSLLLQEARKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGVIR H K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAHYTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 89/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEREYFVCSTYHDVYVAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD---KQFPDNELIQLI--------------------ESMLEK------------- 84
V+ K+ K ++ ++I + + EK
Sbjct: 58 VLGFKEIIEKNMESTKIYEVINFLASSRPTAVNLFWALERMKKVFEKARNLSQSQIYSLL 117
Query: 85 ----------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
D S NK IG +G LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 LQEARKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
H K + + YV E YL AR TA +
Sbjct: 172 EAHYTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|366166915|ref|ZP_09466670.1| translation initiation factor 2B subunit I [Acetivibrio
cellulolyticus CD2]
Length = 343
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 83/141 (58%), Gaps = 18/141 (12%)
Query: 155 SLEKYVGE---KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES- 210
S E++ E D + S RPTAVN+ A D V + + + P++ ++I++IE+
Sbjct: 68 STEQFFTELKKACDLIKSTRPTAVNLFWAVDRVYNK-AVFNMDKPID----QIIKIIEAE 122
Query: 211 ---MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
M ++DI N+AIG+ G + LI N +LTHCN G+LAT ++GTALGVIRS H
Sbjct: 123 ACLMEKEDIDSNRAIGKFGNE-LIKEN-----FTILTHCNAGALATCDHGTALGVIRSAH 176
Query: 268 GANKIGAAYCTETRPYNQGAR 288
A K + ETRPY QG+R
Sbjct: 177 EAGKNINVFADETRPYLQGSR 197
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 57/193 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ + LK++DQ LP K+V+++ E+ AIK+M VRGAPAI + G+
Sbjct: 1 MKTLE---FCNGVLKLVDQTKLPTEHKIVELSTYEEIADAIKTMIVRGAPAIGVTAAYGI 57
Query: 61 VVDIKD------KQF--------------------------------------PDNELIQ 76
VV +QF P +++I+
Sbjct: 58 VVAANSINISSTEQFFTELKKACDLIKSTRPTAVNLFWAVDRVYNKAVFNMDKPIDQIIK 117
Query: 77 LIES----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+IE+ M ++DI N+AIG+ G + LI N +LTHCN G+LAT ++GTALGV
Sbjct: 118 IIEAEACLMEKEDIDSNRAIGKFGNE-LIKEN-----FTILTHCNAGALATCDHGTALGV 171
Query: 133 IRSLHGANKIVDI 145
IRS H A K +++
Sbjct: 172 IRSAHEAGKNINV 184
>gi|321262450|ref|XP_003195944.1| methylthioribose-1-phosphate isomerase; Ypr118wp [Cryptococcus
gattii WM276]
gi|317462418|gb|ADV24157.1| Methylthioribose-1-phosphate isomerase, putative; Ypr118wp
[Cryptococcus gattii WM276]
Length = 393
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 2/132 (1%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDIS 217
+V + +DYL S+RPTAVN+ A D ++++L + A+ + R+ ++ + ++D+
Sbjct: 96 WVSQTIDYLQSSRPTAVNLGEAMDRIRAALKDSKAQNQGAGDIIERVKKICGDVHDEDLE 155
Query: 218 DNKAIGRNGAQALIDLNPGVSKLN-VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N +GR GA+ L G K V+T CNTGSLAT+ YGTA+GVI +L N + AY
Sbjct: 156 RNMEMGRLGAEWLWKKRGGGKKGLKVVTVCNTGSLATSGYGTAIGVITALFEENHLDTAY 215
Query: 277 CTETRPYNQGAR 288
+T PY+QG+R
Sbjct: 216 YAQTTPYHQGSR 227
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 36/47 (76%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
++I+DQLLLPH+ + ++ E+A+ AIKSM++RGAPAIA + L L
Sbjct: 27 VEIVDQLLLPHSVVWMPVSTPEEAFDAIKSMRIRGAPAIASLAALTL 73
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLN-VLTHCNTGSLATAEYGTALGVIRSLHGANK 141
++D+ N +GR GA+ L K V+T CNTGSLAT+ YGTA+GVI +L N
Sbjct: 151 DEDLERNMEMGRLGAEWLWKKRGGGKKGLKVVTVCNTGSLATSGYGTAIGVITALFEENH 210
Query: 142 I 142
+
Sbjct: 211 L 211
>gi|389774743|ref|ZP_10192862.1| methylthioribose-1-phosphate isomerase [Rhodanobacter spathiphylli
B39]
gi|388438342|gb|EIL95097.1| methylthioribose-1-phosphate isomerase [Rhodanobacter spathiphylli
B39]
Length = 338
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 13/122 (10%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A D +K + A L++ +++ ++D++ N+ +G G
Sbjct: 84 LRAARPTAVNLMWALDRMKRRIVAGADGDA-------LLREAQAIQDEDLAANRKMGELG 136
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA YGTALGVIR+ A +I Y ETRP+ QG
Sbjct: 137 A-ALI--APGS---GVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARVYAGETRPWQQG 190
Query: 287 AR 288
AR
Sbjct: 191 AR 192
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 109/234 (46%), Gaps = 46/234 (19%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAI-------- 54
S++++ + L +LDQ LLP + ++ N AI+ + VRGAPAI I
Sbjct: 10 SIRAVQWRGDHLCLLDQRLLPGEERWIECRNAAQVTTAIRDLAVRGAPAIGIAAAWGVAM 69
Query: 55 -----VGCLGLVVDIKDKQFPDNELIQLIESMLEKDI--SDNKAIGRNGAQALID----L 103
V ++ D++ + L+ ++ M + + +D A+ R AQA+ D
Sbjct: 70 AAQQGVTLEPVLADLRAARPTAVNLMWALDRMKRRIVAGADGDALLRE-AQAIQDEDLAA 128
Query: 104 NPRVSKL---------NVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDND 154
N ++ +L VLTHCNTGSLATA YGTALGVIR+ A +I +
Sbjct: 129 NRKMGELGAALIAPGSGVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARV--------- 179
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
Y GE + AR T + R D + + L A ++ + +K+ +Q +
Sbjct: 180 ----YAGETRPWQQGARLTMWELVR--DGIPAQLI--ADSAAAHLMKSGAVQWV 225
>gi|365175187|ref|ZP_09362624.1| S-methyl-5-thioribose-1-phosphate isomerase [Synergistes sp.
3_1_syn1]
gi|363613526|gb|EHL65037.1| S-methyl-5-thioribose-1-phosphate isomerase [Synergistes sp.
3_1_syn1]
Length = 343
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 44/178 (24%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I ++ L++LDQ LLP ++ + ED +AI++M VRGAPAI + GLV+ +K
Sbjct: 5 TIEWKDGKLRLLDQRLLPRRTEYAVCESAEDTARAIENMTVRGAPAIGVAAAYGLVLALK 64
Query: 66 DKQFPDN------------ELIQLIESMLE--------------------------KDIS 87
++ F + L I+ M E +DI
Sbjct: 65 NEDFAEAAERLAATRPTAVNLFWAIKRMRELWLENRNKDNGELYLIMENEALTIHNEDIE 124
Query: 88 DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
NK+IGR GA L D + +THCN G+LATA YGTALGV R+ A K + I
Sbjct: 125 INKSIGRFGASVLPD------RGAAITHCNAGALATAGYGTALGVFRAAAEAGKRIRI 176
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML--EKDISDN 219
E + L + RPTAVN+ A +K W + + + LI E++ +DI N
Sbjct: 70 EAAERLAATRPTAVNLFWA---IKRMRELWLENRNKDNGELYLIMENEALTIHNEDIEIN 126
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K+IGR GA L D + THCN G+LATA YGTALGV R+ A K Y E
Sbjct: 127 KSIGRFGASVLPDRGAAI------THCNAGALATAGYGTALGVFRAAAEAGKRIRIYADE 180
Query: 280 TRPYNQG 286
TRP QG
Sbjct: 181 TRPRLQG 187
>gi|403414802|emb|CCM01502.1| predicted protein [Fibroporia radiculosa]
Length = 996
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 7/140 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL-SEWAKASPVNTVKTRLIQLIESMLE 213
+LE +V L +L +ARPTAVN+ A + +L + A + LI +
Sbjct: 690 ALESHVSRHLAFLYTARPTAVNLGAATRRLTRTLQASVAAGKDARAIAYDLIAEGREIDA 749
Query: 214 KDISDNKAIGRNGAQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+D+S NK + + G + L++ PG + LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 750 EDVSRNKQMSKWGGEWLLERVKASGQPG-TGLNVMTVCNTGSLATSGYGTALGLITYLHE 808
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+ AY T++ PY+QG+R
Sbjct: 809 TGVLNRAYFTQSTPYHQGSR 828
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 10/61 (16%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRV-------SKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+D+S NK + + G + L++ RV + LNV+T CNTGSLAT+ YGTALG+I L
Sbjct: 750 EDVSRNKQMSKWGGEWLLE---RVKASGQPGTGLNVMTVCNTGSLATSGYGTALGLITYL 806
Query: 137 H 137
H
Sbjct: 807 H 807
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 31/35 (88%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG 48
++I++QLLLPHT++ ++IN +E A+ AIKSM++RG
Sbjct: 622 IEIVNQLLLPHTTEFIEINTIEQAHDAIKSMKIRG 656
>gi|381157377|ref|ZP_09866611.1| S-methyl-5-thioribose-1-phosphate isomerase [Thiorhodovibrio sp.
970]
gi|380881240|gb|EIC23330.1| S-methyl-5-thioribose-1-phosphate isomerase [Thiorhodovibrio sp.
970]
Length = 356
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E L L +ARPTA+N+ A + +++ ++ PV L+ + + +D++ N+
Sbjct: 89 EDLQRLAAARPTAINLFWAIERMRAFMAPLDHLDPVPA----LLAEAKRIHAEDLAANQR 144
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IG GA ALI S V+THCN G+LAT YGTALGV+RS H A KI Y ETR
Sbjct: 145 IGELGA-ALI-----ASPTAVVTHCNAGALATGGYGTALGVVRSAHAAGKITRVYADETR 198
Query: 282 PYNQGAR 288
P+ QG+R
Sbjct: 199 PWMQGSR 205
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 82/186 (44%), Gaps = 51/186 (27%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
++++ L +LDQ LLP T+ V +V+D QAI M VRGAPAI + G+V+
Sbjct: 13 HAVLWHDERLYLLDQRLLPETTAFVACESVQDTAQAITDMVVRGAPAIGVAAAYGVVLAA 72
Query: 65 K---------------------------------------------DKQFPDNELIQLIE 79
+ D P L+ +
Sbjct: 73 RARVADAGNHWRERIEEDLQRLAAARPTAINLFWAIERMRAFMAPLDHLDPVPALLAEAK 132
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ +D++ N+ IG GA ALI S V+THCN G+LAT YGTALGV+RS H A
Sbjct: 133 RIHAEDLAANQRIGELGA-ALI-----ASPTAVVTHCNAGALATGGYGTALGVVRSAHAA 186
Query: 140 NKIVDI 145
KI +
Sbjct: 187 GKITRV 192
>gi|291613946|ref|YP_003524103.1| translation initiation factor, aIF-2BI family [Sideroxydans
lithotrophicus ES-1]
gi|291584058|gb|ADE11716.1| translation initiation factor, aIF-2BI family [Sideroxydans
lithotrophicus ES-1]
Length = 363
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ +K + E L ++RPTAVN+ A ++ A +P V RL+ +
Sbjct: 87 ERTEFDKGMEEGFTVLAASRPTAVNLFWALQRMRKVWVSVATQTP-QQVAQRLLAEAHEI 145
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L +DI NKA+G NGA L D VLTHCN G+LATA +GTALGV RS A K
Sbjct: 146 LAEDIRINKAMGANGAALLKD------GARVLTHCNAGALATAGWGTALGVFRSAVEAGK 199
Query: 272 IGAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 200 KISVIADETRPFLQGAR 216
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 50/98 (51%), Gaps = 21/98 (21%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGA 139
+L +DI NKA+G NGA L D VLTHCN G+LATA +GTALGV RS +
Sbjct: 145 ILAEDIRINKAMGANGAALLKD------GARVLTHCNAGALATAGWGTALGVFRSAVEAG 198
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
KI I D+ P +L AR TA M
Sbjct: 199 KKISVIADETRP--------------FLQGARLTAWEM 222
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + L+++DQ +LP + + + + I+SM VRGAPAI + G+ ++
Sbjct: 3 IETLRWFNDRLEMIDQRILPAAFEYLSYYSAASVAEGIRSMVVRGAPAIGVAAAYGVALE 62
>gi|352081373|ref|ZP_08952251.1| translation initiation factor, aIF-2BI family [Rhodanobacter sp.
2APBS1]
gi|351683414|gb|EHA66498.1| translation initiation factor, aIF-2BI family [Rhodanobacter sp.
2APBS1]
Length = 339
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A D +K ++ A R Q I++ +D++ N+ +G
Sbjct: 81 LAMLRAARPTAVNLMWALDRMKKRIA----AGADAGALLREAQAIQN---EDLAANRRMG 133
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI GV LTHCNTGSLATA YGTALGVIR+ A +I Y ETRP+
Sbjct: 134 ELGA-ALISTGSGV-----LTHCNTGSLATAGYGTALGVIRAGVAAGRIARVYAGETRPW 187
Query: 284 NQGAR 288
QGAR
Sbjct: 188 QQGAR 192
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 56/239 (23%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------- 47
S++++ ++ L++LDQ LLP + +D + QAI+ + VR
Sbjct: 10 SIRAVQWQGDHLRLLDQRLLPGEERWIDCRDAAQVTQAIRDLAVRGAPAIGIAAAWGVAM 69
Query: 48 ----GAPAIAIVGCLG----------LVVDIKDKQFPDNELIQLI----ESMLEKDISDN 89
GAP ++ L +D K+ + +++ +D++ N
Sbjct: 70 AAQQGAPLEPVLAMLRAARPTAVNLMWALDRMKKRIAAGADAGALLREAQAIQNEDLAAN 129
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
+ +G GA ALI VLTHCNTGSLATA YGTALGVIR+ A +I +
Sbjct: 130 RRMGELGA-ALISTGS-----GVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARV---- 179
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
Y GE + AR T + R D + + L A ++ + +K+ +Q +
Sbjct: 180 ---------YAGETRPWQQGARLTMWELVR--DGIPAQLI--ADSAAAHLMKSGAVQWV 225
>gi|254567139|ref|XP_002490680.1| Methylthioribose-1-phosphate isomerase [Komagataella pastoris
GS115]
gi|313471374|sp|C4QYS6.1|MTNA_PICPG RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|238030476|emb|CAY68400.1| Methylthioribose-1-phosphate isomerase [Komagataella pastoris
GS115]
gi|328351066|emb|CCA37466.1| hypothetical protein PP7435_Chr1-1348 [Komagataella pastoris CBS
7435]
Length = 411
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 59/198 (29%)
Query: 3 SLQSIIY--EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
SLQ+I + +K L ILDQLL+P+ +K + ++N++D Y I+ MQVRGAPAIAIVG +
Sbjct: 2 SLQAIKFDRQKTRLDILDQLLIPYQTKYIQVSNIDDGYSVIQKMQVRGAPAIAIVGSFSI 61
Query: 61 VVDI-------KDKQFPDNELIQLIESMLEK----------------------------- 84
++ K+ D + + ++ LEK
Sbjct: 62 TCELNSVKDGQKNNHGYDVSDLSVFKAALEKRIDYLIKSRPTAVNLVNACTAIKAIVETA 121
Query: 85 --------------------DISDNKAIGRNGAQALI-DLNPRVSKLNVLTHCNTGSLAT 123
D+ +N IG NG + + +L+ V+T CNTGSLAT
Sbjct: 122 CTIDDLYAEVLRYSVVLFEDDLKNNYRIGANGVRYIDNELSNFEGPFAVMTICNTGSLAT 181
Query: 124 AEYGTALGVIRSLHGANK 141
+ +GTALG+IRSL +K
Sbjct: 182 SGHGTALGIIRSLWAKSK 199
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 21/145 (14%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+++DYL+ +RPTAVN+ A ++K+ + A ++ + +++ + E D+ +N
Sbjct: 92 KRIDYLIKSRPTAVNLVNACTAIKAIVE---TACTIDDLYAEVLRYSVVLFEDDLKNNYR 148
Query: 222 IGRNGAQALI-DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK--------- 271
IG NG + + +L+ V+T CNTGSLAT+ +GTALG+IRSL +K
Sbjct: 149 IGANGVRYIDNELSNFEGPFAVMTICNTGSLATSGHGTALGIIRSLWAKSKANPRNADDK 208
Query: 272 --------IGAAYCTETRPYNQGAR 288
+ Y ETRPYNQG+R
Sbjct: 209 TIQGQKSWLSHVYACETRPYNQGSR 233
>gi|126660007|ref|ZP_01731129.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. CCY0110]
gi|126618685|gb|EAZ89432.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. CCY0110]
Length = 350
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 50/182 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +++ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 1 MNTIYPVVWSNNKVLLIDQTALPSRYTLVEISRYEDMAKAIKTMIVRGAPAIGVAAAYGM 60
Query: 61 VVDIKDKQFPDNE----------------------------------------------- 73
+ +D Q + E
Sbjct: 61 YLGARDIQTKEREIFLKQLEKVAEILRQTRPTAVNLFWAISRMLKTAYESIGTVEEIKQI 120
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L+Q + + E+D+ +AIG+N +L L + KL +LTHCN G+LATA YGTALGVI
Sbjct: 121 LLQTAQQIQEEDVKTCQAIGQN---SLSILPKKTEKLTILTHCNAGALATAGYGTALGVI 177
Query: 134 RS 135
R+
Sbjct: 178 RA 179
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q + + K + + + L RPTAVN+ A + + E V +K L+
Sbjct: 65 RDIQTKEREIFLKQLEKVAEILRQTRPTAVNLFWAISRMLKTAYE--SIGTVEEIKQILL 122
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
Q + + E+D+ +AIG+N +L L KL +LTHCN G+LATA YGTALGVIR+
Sbjct: 123 QTAQQIQEEDVKTCQAIGQN---SLSILPKKTEKLTILTHCNAGALATAGYGTALGVIRA 179
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++ + ETRP QGA+
Sbjct: 180 AWTEGRLKRVFADETRPRLQGAK 202
>gi|71732006|gb|EAO34063.1| Initiation factor 2B alpha/beta/delta [Xylella fastidiosa subsp.
sandyi Ann-1]
Length = 354
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 105/229 (45%), Gaps = 65/229 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ H LK+LDQ LP + V+ ++ ED QAI+++ VRGAPAI IV G V+
Sbjct: 15 VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLA 74
Query: 64 IKDKQFPDN--ELIQL------------------------------------------IE 79
++ + D L +L E
Sbjct: 75 AREIEAVDGIEALCKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMECEAE 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
S+ +D++ N+ +G GA ALI + VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 SIAREDLTANRCMGAYGA-ALIPIGS-----GVLTHCNTGSLATAGFGTALGVIRAGIAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+I + + GE +L AR T +++ D + ++L
Sbjct: 189 GRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDTTL 222
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ ++ +LS A A ++ ES+ +D++ N+ +G
Sbjct: 94 LQRLHAARPTAVNLAWVLARMRRTLSA-AHADWRQVMECEA----ESIAREDLTANRCMG 148
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI + GV LTHCNTGSLATA +GTALGVIR+ +I + ETRP+
Sbjct: 149 AYGA-ALIPIGSGV-----LTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGETRPW 202
Query: 284 NQGAR 288
QGAR
Sbjct: 203 LQGAR 207
>gi|84489818|ref|YP_448050.1| translation initiation factor aIF-2B, subunit 1 [Methanosphaera
stadtmanae DSM 3091]
gi|121717177|sp|Q2NFJ6.1|MTNA_METST RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|84373137|gb|ABC57407.1| putative translation initiation factor aIF-2B, subunit 1
[Methanosphaera stadtmanae DSM 3091]
Length = 314
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 36/172 (20%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ +E + L +LDQ LPHT + V+ D IK+M+VRGAPAI + G+ +
Sbjct: 2 IRTLYWENNRLFLLDQTKLPHTIEYVECRTYTDVIDGIKTMKVRGAPAIGVSAAYGMALG 61
Query: 63 ------------DIKDKQFPDNELIQLIESMLE-----------------KDISDNKAIG 93
+IK + L ++ +L+ D++ NK IG
Sbjct: 62 ELAGEDMDVIGDEIKSARPTAVNLFWAVDKVLDLVSRGKSAVDVAIEMEKDDVAINKKIG 121
Query: 94 RNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
G ++ID N +LTHCN G+LA A YGTALGVIR+ H ANK +D+
Sbjct: 122 EYG-NSIIDDND-----TILTHCNAGALACAGYGTALGVIRAAHEANKNIDV 167
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 73/138 (52%), Gaps = 20/138 (14%)
Query: 155 SLEKYVGEKLDYL----VSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+L + GE +D + SARPTAVN+ A D V +S A V
Sbjct: 59 ALGELAGEDMDVIGDEIKSARPTAVNLFWAVDKVLDLVSRGKSAVDVAI----------E 108
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M + D++ NK IG G ++ID N +LTHCN G+LA A YGTALGVIR+ H AN
Sbjct: 109 MEKDDVAINKKIGEYG-NSIIDDND-----TILTHCNAGALACAGYGTALGVIRAAHEAN 162
Query: 271 KIGAAYCTETRPYNQGAR 288
K C ETRP QGAR
Sbjct: 163 KNIDVICDETRPVLQGAR 180
>gi|260892852|ref|YP_003238949.1| translation initiation factor, aIF-2BI family [Ammonifex degensii
KC4]
gi|260864993|gb|ACX52099.1| translation initiation factor, aIF-2BI family [Ammonifex degensii
KC4]
Length = 351
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN++ A + + P V L + +M E+D+ N+AIG GA AL
Sbjct: 87 RPTAVNLQWAVRRQMKVAARHREEGP-EAVVAALEREARAMQEEDVRTNRAIGAYGA-AL 144
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ + VLTHCN GSLAT YGTALGVIR+ H A KI Y ETRP QGAR
Sbjct: 145 LPF-----RARVLTHCNAGSLATCGYGTALGVIRAAHAAGKIAMVYADETRPLLQGAR 197
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%), Gaps = 6/63 (9%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+M E+D+ N+AIG GA AL+ RV LTHCN GSLAT YGTALGVIR+ H A
Sbjct: 125 AMQEEDVRTNRAIGAYGA-ALLPFRARV-----LTHCNAGSLATCGYGTALGVIRAAHAA 178
Query: 140 NKI 142
KI
Sbjct: 179 GKI 181
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAI 52
++ + +++ +L +LDQ LLPH + + + D AIK + VRGAPAI
Sbjct: 1 MKPLYWKEGALYLLDQTLLPHKVHYLRLTDYRDVVAAIKRLSVRGAPAI 49
>gi|406981579|gb|EKE03029.1| hypothetical protein ACD_20C00287G0012 [uncultured bacterium]
Length = 356
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 87/163 (53%), Gaps = 19/163 (11%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+G ALG H +D K + F K + E DYL S RPTAVN+ A D +
Sbjct: 61 FGIALGAQELSH-----IDSKSEFF-------KRLEEIGDYLKSTRPTAVNLMWAVDR-Q 107
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+ ++ + V+ + LI+ M ++DI NK IG++GA+ L P +LTH
Sbjct: 108 LNFAKSVNSEDVSLITDALIENAIKMHDEDIEINKKIGKHGAE----LVP--EGATILTH 161
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CN G+LATA YGTALGVIR+ + + + ETRP QGA+
Sbjct: 162 CNAGALATAGYGTALGVIRAAYEKDPTIRVFADETRPRQQGAK 204
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 87/184 (47%), Gaps = 55/184 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV- 61
++++I + + + ++DQ LP+ + VDI + + AIK M VRGAPAI I G G+
Sbjct: 6 NVKTIEWNEDHVTLIDQTQLPYNFETVDITDYQQMGTAIKDMLVRGAPAIGIAGAFGIAL 65
Query: 62 -------VDIKDKQFPDNELI--------------------------------------Q 76
+D K + F E I
Sbjct: 66 GAQELSHIDSKSEFFKRLEEIGDYLKSTRPTAVNLMWAVDRQLNFAKSVNSEDVSLITDA 125
Query: 77 LIES---MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
LIE+ M ++DI NK IG++GA+ L P + +LTHCN G+LATA YGTALGVI
Sbjct: 126 LIENAIKMHDEDIEINKKIGKHGAE----LVPEGA--TILTHCNAGALATAGYGTALGVI 179
Query: 134 RSLH 137
R+ +
Sbjct: 180 RAAY 183
>gi|336324323|ref|YP_004604290.1| methylthioribose-1-phosphate isomerase [Flexistipes sinusarabici
DSM 4947]
gi|336107904|gb|AEI15722.1| Methylthioribose-1-phosphate isomerase [Flexistipes sinusarabici
DSM 4947]
Length = 326
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 51/207 (24%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ IIY+ + LK+LDQ LP + ++ + +AI+SM+VRGAPAI + G
Sbjct: 2 IRPIIYDNNILKLLDQRKLPSEQIYCECSDFDSIVEAIRSMKVRGAPAIGVAAAFGFYFG 61
Query: 64 IKD--------------------------------KQFPDNELIQLIESMLEKDISDNKA 91
I+D +++ +N L + + ++D+ NK
Sbjct: 62 IRDGLNADKVYSKLFDTRPTAVNLKWGLDRMKESFEKYGENYLEKTAIEIFDEDVKTNKK 121
Query: 92 IGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFP 151
+ +GA N+LTHCN G+LATA YGTALGVIRS+ F
Sbjct: 122 LSSHGASLF------KGGENILTHCNAGALATAGYGTALGVIRSV-------------FY 162
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMK 178
++ YV E + +R T+ ++
Sbjct: 163 KTKNIHVYVDETRPFFQGSRLTSFELR 189
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+K D +K S ++ + N ++ I++ ++D+ NK + +G
Sbjct: 75 LFDTRPTAVNLKWGLDRMKESFEKYGE----NYLEKTAIEI----FDEDVKTNKKLSSHG 126
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A N+LTHCN G+LATA YGTALGVIRS+ K Y ETRP+ QG
Sbjct: 127 ASLF------KGGENILTHCNAGALATAGYGTALGVIRSVFYKTKNIHVYVDETRPFFQG 180
Query: 287 AR 288
+R
Sbjct: 181 SR 182
>gi|401420724|ref|XP_003874851.1| translation initiation factor 2 subunit,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322491087|emb|CBZ26352.1| translation initiation factor 2 subunit,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 499
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 79/135 (58%), Gaps = 2/135 (1%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
++ ++ D+++++RPTAVN+ +K+ + + V ++L E++ KD
Sbjct: 209 VQTFLLTSCDFVMTSRPTAVNLFNCLRDLKAQVDKLDLTKAAAEVAQAFVELAEAVYTKD 268
Query: 216 ISDNKAIGRNGAQALIDLN--PGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
++ N+ I ++GA + G K+++LT CNTG+LAT+ YGTALGV+R L +
Sbjct: 269 VAFNEGIMQHGAAHIFAAAKAEGRDKVSILTICNTGALATSRYGTALGVVRQLFYDGNLE 328
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+NQGAR
Sbjct: 329 KVYACETRPWNQGAR 343
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+SI Y SL++LDQ LP + D+ VED + AIK M+VRGAPAIA+ LG+ V
Sbjct: 133 TLESIKYTPGSLRLLDQRKLPLETVFDDVLTVEDIWSAIKEMRVRGAPAIAVSAALGIAV 192
Query: 63 DIKDK 67
+ K
Sbjct: 193 ATQRK 197
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTALG 131
++L E++ KD++ N+ I ++GA + K+++LT CNTG+LAT+ YGTALG
Sbjct: 257 FVELAEAVYTKDVAFNEGIMQHGAAHIFAAAKAEGRDKVSILTICNTGALATSRYGTALG 316
Query: 132 VIRSL 136
V+R L
Sbjct: 317 VVRQL 321
>gi|344996028|ref|YP_004798371.1| methylthioribose-1-phosphate isomerase [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964247|gb|AEM73394.1| Methylthioribose-1-phosphate isomerase [Caldicellulosiruptor
lactoaceticus 6A]
Length = 342
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E ++YL S+RPTA N+ A + +K + + S + + + L+Q + ++D S N
Sbjct: 74 IYEIINYLASSRPTAANLFWALERMKKVFEKASNLSQ-SQIYSLLLQEARKIEDEDKSIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG +G LI N+LTHCN G+LAT YGTALGVIR H K Y E
Sbjct: 133 KKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAHFTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 89/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK+M +RGAP I IV G+
Sbjct: 1 MKHFE---FESDKLIVLDQRKLPFEKEYFVCSTYQDVYLAIKNMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD------------------------------------KQFPDNE----------L 74
V+ K+ K F L
Sbjct: 58 VLGFKEIIEKNMDSAKIYEIINYLASSRPTAANLFWALERMKKVFEKASNLSQSQIYSLL 117
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + ++D S NK IG +G LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 LQEARKIEDEDKSINKKIGEHG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
H K + + YV E YL AR TA +
Sbjct: 172 EAHFTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|219669782|ref|YP_002460217.1| translation initiation factor, aIF-2BI family [Desulfitobacterium
hafniense DCB-2]
gi|254813645|sp|B8FRM1.1|MTNA_DESHD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|219540042|gb|ACL21781.1| translation initiation factor, aIF-2BI family [Desulfitobacterium
hafniense DCB-2]
Length = 345
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 162 EKLDY-LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
EK+ + L RPTAVN+ A ++ L + +A + ++ L+ E++ E D N+
Sbjct: 76 EKVQHRLAETRPTAVNLFWALRRMEDRLRDQHEAKELAEIRQALVAEAENIAEDDRRVNR 135
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
IG +G A++ ++ N+LTHCN G+LAT EYGTALGVIR+ A K Y ET
Sbjct: 136 LIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGVIRAAQQAGKKVHVYAGET 189
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 190 RPFLQGAR 197
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L+ E++ E D N+ IG +G A++ ++ N+LTHCN G+LAT EYGTALGVI
Sbjct: 119 LVAEAENIAEDDRRVNRLIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGVI 172
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
R+ A K V + Y GE +L AR TA+ +
Sbjct: 173 RAAQQAGKKVHV-------------YAGETRPFLQGARLTALEL 203
>gi|423074811|ref|ZP_17063535.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfitobacterium
hafniense DP7]
gi|361854314|gb|EHL06398.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfitobacterium
hafniense DP7]
Length = 339
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 162 EKLDY-LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
EK+ + L RPTAVN+ A ++ L + +A + ++ L+ E++ E D N+
Sbjct: 70 EKVQHRLAETRPTAVNLFWALRRMEDRLRDQHEAKELAEIRQALVAEAENIAEDDRRVNR 129
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
IG +G A++ ++ N+LTHCN G+LAT EYGTALGVIR+ A K Y ET
Sbjct: 130 LIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGVIRAAQQAGKKVHVYAGET 183
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 184 RPFLQGAR 191
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 19/104 (18%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L+ E++ E D N+ IG +G A++ ++ N+LTHCN G+LAT EYGTALGVI
Sbjct: 113 LVAEAENIAEDDRRVNRLIGEHG-NAIV-----TAEANILTHCNAGALATVEYGTALGVI 166
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
R+ A K V + Y GE +L AR TA+ +
Sbjct: 167 RAAQQAGKKVHV-------------YAGETRPFLQGARLTALEL 197
>gi|452993912|emb|CCQ94548.1| Methylthioribose-1-phosphate isomerase [Clostridium ultunense Esp]
Length = 345
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVG---EKLDYLVSARPTAVNMK 178
ATA YG L ++F D EK++ E ++ L +RPTAVN+
Sbjct: 54 ATAAYGVVLAA---------------REFLKEDK-EKFLANMKEAMELLNRSRPTAVNLM 97
Query: 179 RAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVS 238
A +K + E K PVN + ++ + +++L++DI NK + + G Q +
Sbjct: 98 WAIKKMKDLIEE-NKDLPVNEIYKKIKEEADTILKEDIETNKKMAKYGNQIV------GK 150
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
K +LTHCNTG+LATA +GTALGV+R + K Y ETRP QG R
Sbjct: 151 KATILTHCNTGALATAGFGTALGVVREAFYSGKDILVYADETRPRLQGGR 200
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 55/200 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK +++I +++ L ++DQ LP + ++ + D AI M VRGAPAI G+
Sbjct: 1 MKEIKTIEFKEDILYLIDQRKLPLSYEIFECRTYRDVDFAITDMVVRGAPAIGATAAYGV 60
Query: 61 VV---------------------------------------DIKD-----KQFPDNELIQ 76
V+ +KD K P NE+ +
Sbjct: 61 VLAAREFLKEDKEKFLANMKEAMELLNRSRPTAVNLMWAIKKMKDLIEENKDLPVNEIYK 120
Query: 77 LI----ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
I +++L++DI NK + + G Q + K +LTHCNTG+LATA +GTALGV
Sbjct: 121 KIKEEADTILKEDIETNKKMAKYGNQIV------GKKATILTHCNTGALATAGFGTALGV 174
Query: 133 IR-SLHGANKIVDIKDKQFP 151
+R + + I+ D+ P
Sbjct: 175 VREAFYSGKDILVYADETRP 194
>gi|389794731|ref|ZP_10197877.1| methylthioribose-1-phosphate isomerase [Rhodanobacter fulvus Jip2]
gi|388431945|gb|EIL88985.1| methylthioribose-1-phosphate isomerase [Rhodanobacter fulvus Jip2]
Length = 340
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 83/141 (58%), Gaps = 21/141 (14%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
+Q P +D+L L +ARPTAVN+ A D +K ++ A A L++
Sbjct: 74 QQAPLDDALA--------MLRAARPTAVNLMWALDRMKKRIAAGADAEA-------LLRE 118
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+++ ++D++ N+ +G GA LI PG VLTHCNTGSLATA +GTALGVIR+
Sbjct: 119 AQAIQDEDLAANRRMGELGA-GLI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGV 172
Query: 268 GANKIGAAYCTETRPYNQGAR 288
A++I Y ETRP+ QGAR
Sbjct: 173 AADRIVRVYAGETRPWLQGAR 193
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 44/214 (20%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++++ + L +LDQ LLP + ++ + AI+ + VRGAPAI I G+ +
Sbjct: 11 TIRAVQWRGDHLCLLDQRLLPAEERWIECRDTAQVTAAIRDLAVRGAPAIGIAAAWGVAM 70
Query: 63 DIKDKQFPDNEL----------IQLIESM--LEKDI---SDNKAIGRNGAQALID----L 103
+ + D+ L + L+ ++ ++K I +D +A+ R AQA+ D
Sbjct: 71 AARQQAPLDDALAMLRAARPTAVNLMWALDRMKKRIAAGADAEALLRE-AQAIQDEDLAA 129
Query: 104 NPRVSKL---------NVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDND 154
N R+ +L VLTHCNTGSLATA +GTALGVIR+ A++IV +
Sbjct: 130 NRRMGELGAGLIAPGSGVLTHCNTGSLATAGFGTALGVIRAGVAADRIVRV--------- 180
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
Y GE +L AR T + R D + + L
Sbjct: 181 ----YAGETRPWLQGARLTMWELVR--DGIPAQL 208
>gi|365839623|ref|ZP_09380858.1| S-methyl-5-thioribose-1-phosphate isomerase [Anaeroglobus geminatus
F0357]
gi|364564464|gb|EHM42231.1| S-methyl-5-thioribose-1-phosphate isomerase [Anaeroglobus geminatus
F0357]
Length = 354
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 171 RPTAVNMKRA-ADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
RPTAVN+ A +K++ E A + L + ++ KDI N++I GA A
Sbjct: 90 RPTAVNLHWALTRMLKTAEKELAAGKSSAAITLALEREAVTLHAKDIEINRSISAYGAAA 149
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+I + G KL VLTHCN G+LATA+ GTALGVIR+LH I Y ETRP QGAR
Sbjct: 150 II-MQKGAKKLTVLTHCNAGALATADIGTALGVIRALHKRGLIERVYADETRPLLQGAR 207
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 82/190 (43%), Gaps = 57/190 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ + ++ L ILDQ LP + +D AI + VRGAPAI + GL
Sbjct: 1 MKTLE---WRRNELIILDQTKLPAEETYRRCTSWQDVKDAISVLAVRGAPAIGVAAAYGL 57
Query: 61 VV---DIKDKQFPDNELIQ----------------------LIESML---EKDISDNK-- 90
V+ ++ ++ D + + ML EK+++ K
Sbjct: 58 VLGASELLRRKITDTAVFSAGLATVAAALDAARPTAVNLHWALTRMLKTAEKELAAGKSS 117
Query: 91 -----------------------AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYG 127
+I GA A+I + KL VLTHCN G+LATA+ G
Sbjct: 118 AAITLALEREAVTLHAKDIEINRSISAYGAAAII-MQKGAKKLTVLTHCNAGALATADIG 176
Query: 128 TALGVIRSLH 137
TALGVIR+LH
Sbjct: 177 TALGVIRALH 186
>gi|15839142|ref|NP_299830.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa 9a5c]
gi|11132005|sp|Q9PAG5.1|MTNA_XYLFA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|9107764|gb|AAF85350.1|AE004062_5 initiation factor eIF-2B, alpha subunit-related [Xylella fastidiosa
9a5c]
Length = 354
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 63/220 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ H LK+LDQ LP + V+ ++ ED QAI+++ VRGAPAI IV G V+
Sbjct: 15 VRPILWTGHFLKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
++ + D E ++ +E L++
Sbjct: 75 AREIEAVDGIEALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQAMAREAE 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA ALI + VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 SIAREDLTANRCMGAYGA-ALIPIGS-----GVLTHCNTGSLATAGFGTALGVIRAGIAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+I + + GE +L AR T +++
Sbjct: 189 GRIARV-------------FAGETRPWLQGARLTVWELQQ 215
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 75/129 (58%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS----EWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L +ARPTAVN+ ++ +LS +W +A + + ES+ +D++ N
Sbjct: 94 LQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQA---------MAREAESIAREDLTAN 144
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA ALI + GV LTHCNTGSLATA +GTALGVIR+ +I + E
Sbjct: 145 RCMGAYGA-ALIPIGSGV-----LTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGE 198
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 199 TRPWLQGAR 207
>gi|289208382|ref|YP_003460448.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio sp.
K90mix]
gi|288944013|gb|ADC71712.1| translation initiation factor, aIF-2BI family [Thioalkalivibrio sp.
K90mix]
Length = 358
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
D + V +D L ++RPTAVN+ A D + + A ML
Sbjct: 75 RDDWRERVAADMDRLRASRPTAVNLFWALDRMAREVD---GAPDPEAAIEAATTAARQML 131
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
+ DI+ N+ +GR+GA +LI+ PG + VLTHCNTGSLAT YGTALGVIR+ ++
Sbjct: 132 DDDIAGNRRMGRHGA-SLIE--PGHA---VLTHCNTGSLATGGYGTALGVIRAAWDEGRV 185
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP+ QG+R
Sbjct: 186 TEVFADETRPWLQGSR 201
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 50/187 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++ I +E +L +LDQ LLP + + + AI+ M VRGAPAI I G+V+
Sbjct: 8 TIRPIRFEDGNLYLLDQRLLPGEAVRQCYTDAGEVATAIRDMVVRGAPAIGITAAFGVVL 67
Query: 63 ---------DIKDKQFPDNELIQ-----------------------------------LI 78
D +++ D + ++
Sbjct: 68 ACQKARGRDDWRERVAADMDRLRASRPTAVNLFWALDRMAREVDGAPDPEAAIEAATTAA 127
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
ML+ DI+ N+ +GR+GA +LI+ VLTHCNTGSLAT YGTALGVIR+
Sbjct: 128 RQMLDDDIAGNRRMGRHGA-SLIE-----PGHAVLTHCNTGSLATGGYGTALGVIRAAWD 181
Query: 139 ANKIVDI 145
++ ++
Sbjct: 182 EGRVTEV 188
>gi|347733243|ref|ZP_08866307.1| methylthioribose-1-phosphate isomerase [Desulfovibrio sp. A2]
gi|347518002|gb|EGY25183.1| methylthioribose-1-phosphate isomerase [Desulfovibrio sp. A2]
Length = 350
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 87/170 (51%), Gaps = 29/170 (17%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G L A + + D P D L L+ + ARPTAVN++ A D
Sbjct: 55 TAAWGCVLA-------AYEAAEAGDHWHPVLDGL-------LERIAGARPTAVNLRWAVD 100
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEK----DISDNKAIGRNGAQALIDLNPGVS 238
++ A +P T LI L ES + DI N+A+GR+GA ALID
Sbjct: 101 RMRKVWKT-AGHAPFAT----LISLWESEARRIHRDDIEINRAMGRHGA-ALID-----E 149
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
V+THCN G+LATA YGTALGVIR A+K + ETRP+ QGAR
Sbjct: 150 GDTVMTHCNAGALATAGYGTALGVIRGAVDADKKISVIANETRPFLQGAR 199
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 79/182 (43%), Gaps = 53/182 (29%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV--------- 61
+ +L +LDQ LLP + ED A++ M VRGAPAI + G V
Sbjct: 11 QRALILLDQRLLPTRQEDFVCRTTEDIVTALQVMVVRGAPAIGVTAAWGCVLAAYEAAEA 70
Query: 62 ----------------------------VDIKDKQF------PDNELIQLIESMLEK--- 84
VD K + P LI L ES +
Sbjct: 71 GDHWHPVLDGLLERIAGARPTAVNLRWAVDRMRKVWKTAGHAPFATLISLWESEARRIHR 130
Query: 85 -DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
DI N+A+GR+GA ALID V+THCN G+LATA YGTALGVIR A+K +
Sbjct: 131 DDIEINRAMGRHGA-ALID-----EGDTVMTHCNAGALATAGYGTALGVIRGAVDADKKI 184
Query: 144 DI 145
+
Sbjct: 185 SV 186
>gi|295696296|ref|YP_003589534.1| translation initiation factor, aIF-2BI family [Kyrpidia tusciae DSM
2912]
gi|295411898|gb|ADG06390.1| translation initiation factor, aIF-2BI family [Kyrpidia tusciae DSM
2912]
Length = 343
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 99/220 (45%), Gaps = 48/220 (21%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNT--------------GSLA---TAEYGTALGV 132
+A+G N + LI R+ HC T G+ A A +G LG
Sbjct: 2 RALGWNDGELLILDQTRLPLEERWLHCRTVEEVAEAIEGMRVRGAPAIGVAAAFGVVLGA 61
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA 192
R++ +I VGE + L + RPTAVN+ A LS
Sbjct: 62 QRAVEQGRRI--------------SAAVGEAVARLAATRPTAVNLFWA-------LSRME 100
Query: 193 KASPV----NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
K + V RL + E+++ +D N+ IGR GA+ L P + +LTHCNT
Sbjct: 101 KVAEVAGEGREAAARLEREAEALMREDEQVNRRIGRWGAE----LIP--QRARILTHCNT 154
Query: 249 GSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LATA YGTALGVIR+ K + ETRP+ QGAR
Sbjct: 155 GALATAAYGTALGVIRAAREEGKEVEVWVDETRPFFQGAR 194
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 94/219 (42%), Gaps = 64/219 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + L ILDQ LP + + VE+ +AI+ M+VRGAPAI + G+V+
Sbjct: 1 MRALGWNDGELLILDQTRLPLEERWLHCRTVEEVAEAIEGMRVRGAPAIGVAAAFGVVLG 60
Query: 64 IK---------------------------------------------DKQFPDNELIQLI 78
+ + + L +
Sbjct: 61 AQRAVEQGRRISAAVGEAVARLAATRPTAVNLFWALSRMEKVAEVAGEGREAAARLEREA 120
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E+++ +D N+ IGR GA +L P+ + +LTHCNTG+LATA YGTALGVIR+
Sbjct: 121 EALMREDEQVNRRIGRWGA----ELIPQ--RARILTHCNTGALATAAYGTALGVIRAARE 174
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
K V++ +V E + AR TA +
Sbjct: 175 EGKEVEV-------------WVDETRPFFQGARLTAYEL 200
>gi|37519764|ref|NP_923141.1| methylthioribose-1-phosphate isomerase [Gloeobacter violaceus PCC
7421]
gi|81711453|sp|Q7NP62.1|MTNA_GLOVI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|35210755|dbj|BAC88136.1| translation initiation factor IF-2B alpha subunit [Gloeobacter
violaceus PCC 7421]
Length = 348
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A D + + A+ P RL + ++LE DI+ +AIG +G
Sbjct: 89 LRATRPTAVNLFWAIDRMLTV----ARRDPSFA---RLEREATAILEGDIATCRAIGEHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L+ L +L +LTHCN G+LATA YGTALGV+RS H A+++ Y ETRP QG
Sbjct: 142 ---LLALPAAPERLRLLTHCNAGALATAGYGTALGVVRSAHRADRLERVYADETRPRLQG 198
Query: 287 AR 288
AR
Sbjct: 199 AR 200
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 87/180 (48%), Gaps = 46/180 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ + + H+ ++DQ +LP + ++I + AI++M VRGAPAI + G+V+
Sbjct: 10 IRPVQWNGHTCVLIDQTVLPGIYRTIEIRTSDQMATAIRTMIVRGAPAIGVAAAFGMVLG 69
Query: 64 IKDKQFPDNELIQLIE-----------------------------------------SML 82
++ P + I +E ++L
Sbjct: 70 WQEA--PQGDPITHLERVAATLRATRPTAVNLFWAIDRMLTVARRDPSFARLEREATAIL 127
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E DI+ +AIG +G L+ L +L +LTHCN G+LATA YGTALGV+RS H A+++
Sbjct: 128 EGDIATCRAIGEHG---LLALPAAPERLRLLTHCNAGALATAGYGTALGVVRSAHRADRL 184
>gi|218248149|ref|YP_002373520.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. PCC 8801]
gi|257060524|ref|YP_003138412.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. PCC 8802]
gi|218168627|gb|ACK67364.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
8801]
gi|256590690|gb|ACV01577.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
8802]
Length = 349
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D + + ++ K + + L RPTAVN+ A + ++SE A V +K L+
Sbjct: 69 RDIKIQERETFFKELEIIAEELRQTRPTAVNLFWAISRMLKTVSE--TAGTVEDIKQILL 126
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + + +D+ + +G NG L+ L P KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 127 KTAQEIQAEDLETCQKMGDNG---LLVLPPEPQKLTLLTHCNAGALATAGYGTALGVIRS 183
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A ++ Y ETRP QGA+
Sbjct: 184 AWTAGRLERVYADETRPRLQGAK 206
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
++++ + + +++Q LLP+ ++V IN+ +D +AIK+M VRGAPAI I GL + +D
Sbjct: 11 VLWQDNQVLLINQTLLPNQYEVVKINSYQDMAKAIKTMIVRGAPAIGIAAAYGLYLGARD 70
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
+ + E L I ML+
Sbjct: 71 IKIQERETFFKELEIIAEELRQTRPTAVNLFWAISRMLKTVSETAGTVEDIKQILLKTAQ 130
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D+ + +G NG L+ L P KL +LTHCN G+LATA YGTALGVIRS A
Sbjct: 131 EIQAEDLETCQKMGDNG---LLVLPPEPQKLTLLTHCNAGALATAGYGTALGVIRSAWTA 187
Query: 140 NKI 142
++
Sbjct: 188 GRL 190
>gi|333987772|ref|YP_004520379.1| methylthioribose-1-phosphate isomerase [Methanobacterium sp.
SWAN-1]
gi|333825916|gb|AEG18578.1| Methylthioribose-1-phosphate isomerase [Methanobacterium sp.
SWAN-1]
Length = 314
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 19/138 (13%)
Query: 155 SLEKYVGEKL----DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+L + GEK+ D + SARPTAVN+ A D V + + ++ +K
Sbjct: 58 ALAELAGEKMEKAADEIKSARPTAVNLFWAVDRVLQAKETGSGSALDEALK--------- 108
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M ++D+ N+AIG+NGA + D + VLTHCN G+LA +YGTALGVIR+
Sbjct: 109 MYDEDVETNRAIGKNGAAVIDDGD------TVLTHCNAGALACVDYGTALGVIRAARDEG 162
Query: 271 KIGAAYCTETRPYNQGAR 288
K C ETRP QGAR
Sbjct: 163 KKINVICDETRPLGQGAR 180
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 37/173 (21%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ ++ + L +LDQ LP + D AIK+M+VRGAPAI + G+ +
Sbjct: 1 MKTMYWKDNELHLLDQTKLPDEVVYMQCKTYMDVIDAIKTMKVRGAPAIGVAAAFGMALA 60
Query: 63 ------------DIKDKQ-------FPDNELIQLIES-----------MLEKDISDNKAI 92
+IK + + + ++Q E+ M ++D+ N+AI
Sbjct: 61 ELAGEKMEKAADEIKSARPTAVNLFWAVDRVLQAKETGSGSALDEALKMYDEDVETNRAI 120
Query: 93 GRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
G+NGA + D + VLTHCN G+LA +YGTALGVIR+ K +++
Sbjct: 121 GKNGAAVIDDGD------TVLTHCNAGALACVDYGTALGVIRAARDEGKKINV 167
>gi|335043679|ref|ZP_08536706.1| methylthioribose-1-phosphate isomerase [Methylophaga
aminisulfidivorans MP]
gi|333790293|gb|EGL56175.1| methylthioribose-1-phosphate isomerase [Methylophaga
aminisulfidivorans MP]
Length = 352
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 28/169 (16%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG L ++ F ++ ++ + L L ++RPTAVN+ A D
Sbjct: 59 TAAYGVVLAA-------------REAWFSAGENWQEAINPPLKRLAASRPTAVNLSWAID 105
Query: 183 SVKS---SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK 239
+K+ SLS++ P L+ + + ++D+ N+ +G+ GA L+D N +
Sbjct: 106 RMKTASASLSKYESPEPA------LLTFAQQIHQEDVKANRTMGQYGAD-LLD-NDSI-- 155
Query: 240 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LATA +GTALGVIR KI Y ETRP+ QG+R
Sbjct: 156 --VLTHCNAGALATAGFGTALGVIRQGFIDGKIEHVYVDETRPWLQGSR 202
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 65/223 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+++++ I++ L +LDQ +LPH ++ ++ + +AIK+M VRGAPAI + G+
Sbjct: 5 LQTIEPILWRDERLHLLDQRVLPHKENWLEFHDSDAVAEAIKTMVVRGAPAIGVTAAYGV 64
Query: 61 VVDIKDKQF----------------------------------------------PDNEL 74
V+ ++ F P+ L
Sbjct: 65 VLAAREAWFSAGENWQEAINPPLKRLAASRPTAVNLSWAIDRMKTASASLSKYESPEPAL 124
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ + + ++D+ N+ +G+ GA L+D N + VLTHCN G+LATA +GTALGVIR
Sbjct: 125 LTFAQQIHQEDVKANRTMGQYGAD-LLD-NDSI----VLTHCNAGALATAGFGTALGVIR 178
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ F D YV E +L +R TA +
Sbjct: 179 -------------QGFIDGKIEHVYVDETRPWLQGSRLTAWEL 208
>gi|284103086|ref|ZP_06386066.1| methylthioribose-1-phosphate isomerase [Candidatus Poribacteria sp.
WGA-A3]
gi|283830288|gb|EFC34528.1| methylthioribose-1-phosphate isomerase [Candidatus Poribacteria sp.
WGA-A3]
Length = 343
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 94 RNGAQALIDLN--PRVSKLNVLTHCNTGSLATAEY----GTALGVIRSLH---GANKIVD 144
+ G L+D + P ++L TH + ++A E A+GV ++ GA ++D
Sbjct: 8 KEGVVRLLDQSQLPGRTELLECTHVDAVAVAIQELKVRGAPAIGVTAAMGVALGAQSVLD 67
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
D + E+ V D L + RPTAVN+ A +K L + V +++RL
Sbjct: 68 T------DVPTFERKVLAICDRLAATRPTAVNLFWAITRMKDVLQA-NRGHVVPEIQSRL 120
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
+Q ++ +D++ KA+G+ GA + D +VLTHCN G+LATA YGTALGV+R
Sbjct: 121 VQEALAIQREDVAMCKAMGQKGAHLIHD------GAHVLTHCNAGALATAGYGTALGVVR 174
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
+ K + ETRP QGAR
Sbjct: 175 AASEQGKAVHIFVNETRPVLQGAR 198
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 67/222 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+ +I +++ +++LDQ LP ++L++ +V+ AI+ ++VRGAPAI + +G+ +
Sbjct: 2 IPTIEWKEGVVRLLDQSQLPGRTELLECTHVDAVAVAIQELKVRGAPAIGVTAAMGVALG 61
Query: 63 --DIKDKQFPDNE---------------------------------------------LI 75
+ D P E L+
Sbjct: 62 AQSVLDTDVPTFERKVLAICDRLAATRPTAVNLFWAITRMKDVLQANRGHVVPEIQSRLV 121
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
Q ++ +D++ KA+G+ GA + D +VLTHCN G+LATA YGTALGV+R+
Sbjct: 122 QEALAIQREDVAMCKAMGQKGAHLIHD------GAHVLTHCNAGALATAGYGTALGVVRA 175
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
K V I +V E L AR TA +
Sbjct: 176 ASEQGKAVHI-------------FVNETRPVLQGARLTAWEL 204
>gi|156937312|ref|YP_001435108.1| translation initiation factor 2B subunit I [Ignicoccus hospitalis
KIN4/I]
gi|156566296|gb|ABU81701.1| translation initiation factor 2B subunit I family (IF-2BI)
[Ignicoccus hospitalis KIN4/I]
Length = 351
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D + L + + E + L + RPTAVN+ A + V E ++ V+ +++ +
Sbjct: 71 DVEGLLRRLREAKEVLANTRPTAVNLFWALERVMKRAEEATRSGSAEAVREAVVEEARKI 130
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++DI N +G+ GA+ + D + VLTHCNTGSLATA YGTALGVIR+ K
Sbjct: 131 QQEDIESNVKMGKIGAKLIEDGD------VVLTHCNTGSLATAGYGTALGVIRAAWEEGK 184
Query: 272 IGAAYCTETRPYNQGAR 288
TETRP +QGAR
Sbjct: 185 RIEVIATETRPLDQGAR 201
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
++DI N +G+ GA+ + D + VLTHCNTGSLATA YGTALGVIR+ K
Sbjct: 132 QEDIESNVKMGKIGAKLIEDGD------VVLTHCNTGSLATAGYGTALGVIRAAWEEGKR 185
Query: 143 VDI 145
+++
Sbjct: 186 IEV 188
>gi|422303688|ref|ZP_16391039.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9806]
gi|389791294|emb|CCI12870.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9806]
Length = 353
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAVITKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E QAI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMAQAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEITTDQKEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|425455589|ref|ZP_18835309.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9807]
gi|389803502|emb|CCI17575.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9807]
Length = 366
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 153 NDSLEKYVGEKL---DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
D E+++ + D L RPTAVN+ A + + E V + L++
Sbjct: 89 TDQTEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAVISKNLLETAH 146
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
++ ++D+ +AIG +G L+ L KL +LTHCNTGSLATA YGTALGVIRS A
Sbjct: 147 NIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTA 203
Query: 270 NKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 204 GRLIQVYADETRPRLQGAK 222
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 23 SIYPVRWQDNKVWLIDQTRLPMDYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 82
Query: 63 DIKDKQFPDNE----------------------LIQLIESMLE----------------- 83
++ E L IE ML+
Sbjct: 83 GTQEITTDQTEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVISKNLL 142
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 143 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 199
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 200 AWTAGRLIQV 209
>gi|425443308|ref|ZP_18823530.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9717]
gi|389715415|emb|CCI00204.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9717]
Length = 359
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG A +I + +QF + + D L RPTAVN+ A +
Sbjct: 63 AAYGMVLG-------AQEITTDQKEQFLAD------LTRIADRLAQTRPTAVNLFWAIER 109
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ E V + L++ +++ ++D+ +AIG +G L+ L KL +L
Sbjct: 110 MLKVARE--SGPEVAVITKNLLETAQNIQKEDVETCRAIGHHG---LLALPEQPEKLTIL 164
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTGSLATA YGTALGVIRS A ++ Y ETRP QGA+
Sbjct: 165 THCNTGSLATAGYGTALGVIRSAWTAGRLIQVYADETRPRLQGAK 209
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEITTDQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAQNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATAGYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|313681072|ref|YP_004058811.1| methylthioribose-1-phosphate isomerase [Oceanithermus profundus DSM
14977]
gi|313153787|gb|ADR37638.1| methylthioribose-1-phosphate isomerase [Oceanithermus profundus DSM
14977]
Length = 343
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 16/126 (12%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAI 222
L ++RPTAVN+ A D +K ++ A+ L+Q +E+ + E+D++ NKAI
Sbjct: 77 LRASRPTAVNLFWALDRMKRVWEGYSGAA------QALVQALEAEALKIAEEDVAANKAI 130
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GR+ + + D + +L HCNTGSLAT +YGTALG+IR H A K A+ ETRP
Sbjct: 131 GRHALELIPD------EARILHHCNTGSLATVDYGTALGIIRIAHEAGKKVHAFLDETRP 184
Query: 283 YNQGAR 288
QGAR
Sbjct: 185 RLQGAR 190
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 44/181 (24%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG------------ 48
M + +SI ++ L +LDQ +P +++ E+ AI+ M VRG
Sbjct: 1 MSTFRSIEWKGDRLVLLDQRRIPEAKVFLELTAPEEVAAAIREMAVRGAPAIGAAAAFGV 60
Query: 49 ----------APAIAIVGC-------LGLVVDIKDKQFPD-----NELIQLIES----ML 82
A A A++ L +D + + L+Q +E+ +
Sbjct: 61 VLAARRGEALAEADALLRASRPTAVNLFWALDRMKRVWEGYSGAAQALVQALEAEALKIA 120
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E+D++ NKAIGR+ + + D + +L HCNTGSLAT +YGTALG+IR H A K
Sbjct: 121 EEDVAANKAIGRHALELIPD------EARILHHCNTGSLATVDYGTALGIIRIAHEAGKK 174
Query: 143 V 143
V
Sbjct: 175 V 175
>gi|225850051|ref|YP_002730285.1| S-methyl-5-thioribose-1-phosphate isomerase [Persephonella marina
EX-H1]
gi|254813655|sp|C0QUC0.1|MTNA_PERMH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|225645540|gb|ACO03726.1| S-methyl-5-thioribose-1-phosphate isomerase [Persephonella marina
EX-H1]
Length = 353
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 82/167 (49%), Gaps = 28/167 (16%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG A+GV + L + D++D D L + RPTAVN+ A + V
Sbjct: 61 YGFAIGVKQILDEGRSLDDVRDV---------------FDRLKNTRPTAVNLFWALERVW 105
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEK-DISD---NKAIGRNGAQALIDLNPGVSKLN 241
W + L+ L+ E+ D+ D NKAIG G Q L+ + N
Sbjct: 106 KKFERWTEEGRSGE---ELVNLLFKEAERIDLEDYHANKAIGGYG-QVLLP-----ERCN 156
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCNTG+LAT+ +GTALGVIRS K Y ETRPY QG+R
Sbjct: 157 VLTHCNTGALATSGWGTALGVIRSAFENGKDITVYVDETRPYLQGSR 203
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 101/225 (44%), Gaps = 67/225 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ I + H L +++QL LP + ++++ + +AI+ M +RGAP I IVG G
Sbjct: 4 IKDIRPIQLKDHKLYVINQLKLPKEKEWLELSTYQQVAEAIEKMIIRGAPLIGIVGAYGF 63
Query: 61 VV-------------DIKD-----------------------KQFP--------DNELIQ 76
+ D++D K+F EL+
Sbjct: 64 AIGVKQILDEGRSLDDVRDVFDRLKNTRPTAVNLFWALERVWKKFERWTEEGRSGEELVN 123
Query: 77 LIESMLEK-DISD---NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
L+ E+ D+ D NKAIG G Q L+ + NVLTHCNTG+LAT+ +GTALGV
Sbjct: 124 LLFKEAERIDLEDYHANKAIGGYG-QVLLP-----ERCNVLTHCNTGALATSGWGTALGV 177
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IRS F + + YV E YL +R TA +
Sbjct: 178 IRS-------------AFENGKDITVYVDETRPYLQGSRLTAWEL 209
>gi|344342371|ref|ZP_08773242.1| Methylthioribose-1-phosphate isomerase [Marichromatium purpuratum
984]
gi|343805707|gb|EGV23602.1| Methylthioribose-1-phosphate isomerase [Marichromatium purpuratum
984]
Length = 351
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 73/125 (58%), Gaps = 10/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L +RPTAVN+ A +++ ++ A P T L+ ++ E+D + N+ IG
Sbjct: 91 LERLAGSRPTAVNLFWAIRRMRALIATLDAADPFAT----LLAEARAVHEEDRASNRRIG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI + ++THCN G+LAT YGTALGV+R+ H A K+ Y ETRP+
Sbjct: 147 ELGA-ALI-----TAPTEIITHCNAGALATGGYGTALGVVRAAHAAGKVERVYADETRPW 200
Query: 284 NQGAR 288
QGAR
Sbjct: 201 MQGAR 205
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 51/182 (28%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
++ ++ L +LDQ +LP +++ ++ +AI+ M VRGAPAI + G+ +
Sbjct: 14 AVRWQDDRLYLLDQRVLPARIEVLAYDDAAAVAEAIRDMVVRGAPAIGVAAAYGVALAGR 73
Query: 63 --------DIK----------------------------------DKQFPDNELIQLIES 80
D K D P L+ +
Sbjct: 74 TAFAAAGADWKQAIEADLERLAGSRPTAVNLFWAIRRMRALIATLDAADPFATLLAEARA 133
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+ E+D + N+ IG GA ALI + ++THCN G+LAT YGTALGV+R+ H A
Sbjct: 134 VHEEDRASNRRIGELGA-ALI-----TAPTEIITHCNAGALATGGYGTALGVVRAAHAAG 187
Query: 141 KI 142
K+
Sbjct: 188 KV 189
>gi|425465679|ref|ZP_18844986.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9809]
gi|389832039|emb|CCI24708.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9809]
Length = 359
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 77/139 (55%), Gaps = 8/139 (5%)
Query: 153 NDSLEKYVGEKL---DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
D E+++ + D L RPTAVN+ A + + E V + L++ +
Sbjct: 76 TDQTEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAVITKNLLETAQ 133
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
++ ++D+ +AIG +G L+ L KL +LTHCNTGSLATA YGTALGVIRS A
Sbjct: 134 NIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATAGYGTALGVIRSAWTA 190
Query: 270 NKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 191 GRLIQVYADETRPRLQGAK 209
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 DIKDKQFPDNE----------------------LIQLIESMLE----------------- 83
++ E L IE ML+
Sbjct: 70 GAQEITTDQTEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAQNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATAGYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|71275187|ref|ZP_00651474.1| Initiation factor 2B alpha/beta/delta [Xylella fastidiosa Dixon]
gi|170731178|ref|YP_001776611.1| methylthioribose-1-phosphate isomerase [Xylella fastidiosa M12]
gi|218526955|sp|B0U5G3.1|MTNA_XYLFM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|71163996|gb|EAO13711.1| Initiation factor 2B alpha/beta/delta [Xylella fastidiosa Dixon]
gi|71730416|gb|EAO32497.1| Initiation factor 2B alpha/beta/delta [Xylella fastidiosa Ann-1]
gi|167965971|gb|ACA12981.1| S-methyl-5-thioribose-1-phosphate isomerase [Xylella fastidiosa
M12]
Length = 354
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 65/229 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ + LK+LDQ LP + V+ ++ ED QAI+++ VRGAPAI IV G V+
Sbjct: 15 VRPILWTGYFLKLLDQRKLPFVVEYVECHSSEDVTQAIRTLIVRGAPAIGIVAGWGAVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
++ + D E ++ +E L++
Sbjct: 75 AREIEAVDGIEALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMECEAE 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
DI+ N+ +G GA ALI + VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 SIAREDITANRCMGAYGA-ALIPIGS-----GVLTHCNTGSLATAGFGTALGVIRAGIAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+I + + GE +L AR T +++ D + ++L
Sbjct: 189 GRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATL 222
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS----EWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L +ARPTAVN+ ++ +LS +W + ES+ +DI+ N
Sbjct: 94 LQRLHAARPTAVNLAWVLARMRRTLSAAHADWRQVMECEA---------ESIAREDITAN 144
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA ALI + GV LTHCNTGSLATA +GTALGVIR+ +I + E
Sbjct: 145 RCMGAYGA-ALIPIGSGV-----LTHCNTGSLATAGFGTALGVIRAGIAQGRIARVFAGE 198
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 199 TRPWLQGAR 207
>gi|416407301|ref|ZP_11688258.1| Methylthioribose-1-phosphate isomerase [Crocosphaera watsonii WH
0003]
gi|357260901|gb|EHJ10233.1| Methylthioribose-1-phosphate isomerase [Crocosphaera watsonii WH
0003]
Length = 350
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 50/189 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +++ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 1 MTTIYPVVWSNNKVLLIDQTCLPSQYTLVEISRYEDMAKAIKTMIVRGAPAIGVAAAYGM 60
Query: 61 VVDIKD----------KQFPD-------------------------------------NE 73
+ ++ KQ + N
Sbjct: 61 YLGAREINTKERETFLKQLEEVAEILRQTRPTAVNLFWAISRMLKIAYETIGTVEEIKNT 120
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ E + +D+ + IG+N Q +I NP KL++LTHCN G+LATA YGTALGVI
Sbjct: 121 LLETAEKINAEDLQTCQDIGKNSLQ-IIPPNP--DKLSILTHCNAGALATAGYGTALGVI 177
Query: 134 RSLHGANKI 142
RS+ A ++
Sbjct: 178 RSVWTAGRL 186
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ ++ K + E + L RPTAVN+ A + E V +K L++ E +
Sbjct: 71 ERETFLKQLEEVAEILRQTRPTAVNLFWAISRMLKIAYE--TIGTVEEIKNTLLETAEKI 128
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D+ + IG+N Q +I NP KL++LTHCN G+LATA YGTALGVIRS+ A +
Sbjct: 129 NAEDLQTCQDIGKNSLQ-IIPPNP--DKLSILTHCNAGALATAGYGTALGVIRSVWTAGR 185
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGA+
Sbjct: 186 LKRVYADETRPRLQGAK 202
>gi|383785763|ref|YP_005470332.1| methylthioribose-1-phosphate isomerase [Fervidobacterium
pennivorans DSM 9078]
gi|383108610|gb|AFG34213.1| methylthioribose-1-phosphate isomerase [Fervidobacterium
pennivorans DSM 9078]
Length = 357
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A D ++ E K + V+ + ++ +E DI NKAIGR+G
Sbjct: 96 LARTRPTAVNLFWALDRMERKAVEHGKFEGL--VRALEEEALKIAIE-DIETNKAIGRHG 152
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
AQ L D VLTHCN G+LAT +YGTALGV+R+ K Y ETRPY QG
Sbjct: 153 AQLLED------GFTVLTHCNAGALATVDYGTALGVLRAAKEQGKRIKVYADETRPYLQG 206
Query: 287 AR 288
AR
Sbjct: 207 AR 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 23/121 (19%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
+DI NKAIGR+GAQ L D VLTHCN G+LAT +YGTALGV+R+ K +
Sbjct: 140 EDIETNKAIGRHGAQLLED------GFTVLTHCNAGALATVDYGTALGVLRAAKEQGKRI 193
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVN-MKRAAD--SVKSSLSEWA-KASPVNT 199
+ Y E YL AR TA MK D + +++ W K +N
Sbjct: 194 KV-------------YADETRPYLQGARLTAWELMKDGFDVTVISDNMAGWVMKQGKINA 240
Query: 200 V 200
V
Sbjct: 241 V 241
>gi|427713254|ref|YP_007061878.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. PCC 6312]
gi|427377383|gb|AFY61335.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. PCC 6312]
Length = 355
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D D L ++ + L RPTAVN+ A D + + A+ V+ ++ L+
Sbjct: 66 RDYADSDRQGLLDHLEQVAILLRQTRPTAVNLFWAIDQMLKAAQ--ARPGSVSEIQAYLL 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
Q + + + DI + IG +G AL + +P KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 124 QTAQKICDDDIRTCQQIGDHGLAALPN-SP--EKLRILTHCNAGALATAGYGTALGVIRS 180
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A ++ Y ETRP QGA+
Sbjct: 181 AWSAGRLERVYADETRPRWQGAK 203
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 55/210 (26%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ + + + ++S++++DQ LP +VDI+ V+D AI +M VRGAPAI + G+
Sbjct: 3 QGIFPVQWHENSVRLIDQTRLPAEYSVVDIHCVDDMATAITTMIVRGAPAIGVAAAFGMY 62
Query: 62 VDIKDKQFPDNE-----------------------------------------------L 74
+ +D D + L
Sbjct: 63 LGARDYADSDRQGLLDHLEQVAILLRQTRPTAVNLFWAIDQMLKAAQARPGSVSEIQAYL 122
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + + + DI + IG +G AL + +P KL +LTHCN G+LATA YGTALGVIR
Sbjct: 123 LQTAQKICDDDIRTCQQIGDHGLAALPN-SPE--KLRILTHCNAGALATAGYGTALGVIR 179
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKL 164
S A ++ ++ + D ++ ++ G KL
Sbjct: 180 SAWSAGRL----ERVYAD-ETRPRWQGAKL 204
>gi|440756572|ref|ZP_20935772.1| S-methyl-5-thioribose-1-phosphate isomerase [Microcystis aeruginosa
TAIHU98]
gi|440172601|gb|ELP52085.1| S-methyl-5-thioribose-1-phosphate isomerase [Microcystis aeruginosa
TAIHU98]
Length = 353
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEIKTDQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|443655647|ref|ZP_21131502.1| S-methyl-5-thioribose-1-phosphate isomerase [Microcystis aeruginosa
DIANCHI905]
gi|443333565|gb|ELS48119.1| S-methyl-5-thioribose-1-phosphate isomerase [Microcystis aeruginosa
DIANCHI905]
Length = 287
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 25 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 82
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 83 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 139
Query: 285 QGAR 288
QGA+
Sbjct: 140 QGAK 143
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ ++ ++D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVI
Sbjct: 62 LLETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVI 118
Query: 134 RSLHGANKIVDI 145
RS A +++ +
Sbjct: 119 RSAWTAGRLIQV 130
>gi|425445995|ref|ZP_18826011.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9443]
gi|389733897|emb|CCI02385.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9443]
Length = 353
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMDYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEITTDQKEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|166366581|ref|YP_001658854.1| methylthioribose-1-phosphate isomerase [Microcystis aeruginosa
NIES-843]
gi|218526917|sp|B0JPT8.1|MTNA_MICAN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|166088954|dbj|BAG03662.1| putative translation initiation factor EIF-2b subunit 1
[Microcystis aeruginosa NIES-843]
Length = 353
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG A +I + +QF + + D L RPTAVN+ A +
Sbjct: 63 AAYGMVLG-------AQEITTDQKEQFLAD------LTRIADRLAQTRPTAVNLFWAIER 109
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ E V + L++ +++ ++D+ +AIG +G L+ L KL +L
Sbjct: 110 MLKVARE--SGPEVAVITKNLLETAQNIQKEDVETCRAIGNHG---LLALPEQPEKLTIL 164
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTGSLATA YGTALGVIRS A ++ Y ETRP QGA+
Sbjct: 165 THCNTGSLATAGYGTALGVIRSAWTAGRLIQVYADETRPRLQGAK 209
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEITTDQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAVITKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAQNIQKEDVETCRAIGNHG---LLALPEQPEKLTILTHCNTGSLATAGYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|425461207|ref|ZP_18840687.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9808]
gi|389826010|emb|CCI23862.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9808]
Length = 353
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 -------DIKDKQFPD---------------NELIQLIESMLE----------------- 83
D K++ D L IE ML+
Sbjct: 70 GAQEIKTDQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|218887325|ref|YP_002436646.1| translation initiation factor, aIF-2BI family [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|254813646|sp|B8DQQ9.1|MTNA_DESVM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218758279|gb|ACL09178.1| translation initiation factor, aIF-2BI family [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 350
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 86/170 (50%), Gaps = 29/170 (17%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G L A + + D P D L L+ + ARPTAVN++ A D
Sbjct: 55 TAAWGCVLA-------AYEAAEAGDHWHPVLDGL-------LERIAKARPTAVNLRWAVD 100
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEK----DISDNKAIGRNGAQALIDLNPGVS 238
++ A +P T LI L ES + DI N+A+GR+GA ALID
Sbjct: 101 RMRKVWKT-AGHAPFAT----LISLWESEARRIHRDDIEINRAMGRHGA-ALID-----E 149
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
V+THCN G+LATA YGTALGVIR A K + ETRP+ QGAR
Sbjct: 150 GDTVMTHCNAGALATAGYGTALGVIRGAVDAGKKISVIANETRPFLQGAR 199
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 78/182 (42%), Gaps = 53/182 (29%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV--------- 61
+ +L +LDQ LLP + ED A++ M VRGAPAI + G V
Sbjct: 11 QRALILLDQRLLPTRQEDFVCRTTEDIVTALQVMVVRGAPAIGVTAAWGCVLAAYEAAEA 70
Query: 62 ----------------------------VDIKDKQF------PDNELIQLIESMLEK--- 84
VD K + P LI L ES +
Sbjct: 71 GDHWHPVLDGLLERIAKARPTAVNLRWAVDRMRKVWKTAGHAPFATLISLWESEARRIHR 130
Query: 85 -DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
DI N+A+GR+GA ALID V+THCN G+LATA YGTALGVIR A K +
Sbjct: 131 DDIEINRAMGRHGA-ALID-----EGDTVMTHCNAGALATAGYGTALGVIRGAVDAGKKI 184
Query: 144 DI 145
+
Sbjct: 185 SV 186
>gi|395332957|gb|EJF65335.1| eukaryotic translation initiation factor 2B [Dichomitus squalens
LYAD-421 SS1]
Length = 386
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLIQLIESM 211
+ L+++V E L +L +ARPTAVN+ A + L + A T+ LI + +
Sbjct: 80 TEVLKQHVSELLAHLFTARPTAVNLGAATRRLSKKLQKEIDADKDTRTIAQELIAEAKQI 139
Query: 212 LEKDISDNKAIGRNGAQALIDL--NPGVS--KLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+D+ NK + + G L++ + G S LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 140 DAEDVGRNKLMSKWGGDWLVERVESQGGSGADLNVMTVCNTGSLATSGYGTALGLITYLH 199
Query: 268 GANKIGAAYCTETRPYNQGAR 288
K+ A+ T++ PY+QG+R
Sbjct: 200 ETGKLQRAFFTQSTPYHQGSR 220
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 68/207 (32%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L SI + L+I++QLLLPHT++ ++I ++DA+ AIKSM++RGAPAIA + L +
Sbjct: 1 MPALTSIRTSEGKLEIVNQLLLPHTTEFIEIKTIDDAFDAIKSMKIRGAPAIASLAALAV 60
Query: 61 VVDIKD--KQFPDNELIQLIESM-------------------------------LEKDIS 87
+ + K P ++ E + L+K+I
Sbjct: 61 ANHLSNALKASPTPPCLETTEVLKQHVSELLAHLFTARPTAVNLGAATRRLSKKLQKEID 120
Query: 88 -------------------DNKAIGRN------GAQALIDLNPRV-------SKLNVLTH 115
D + +GRN G L++ RV + LNV+T
Sbjct: 121 ADKDTRTIAQELIAEAKQIDAEDVGRNKLMSKWGGDWLVE---RVESQGGSGADLNVMTV 177
Query: 116 CNTGSLATAEYGTALGVIRSLHGANKI 142
CNTGSLAT+ YGTALG+I LH K+
Sbjct: 178 CNTGSLATSGYGTALGLITYLHETGKL 204
>gi|425451018|ref|ZP_18830840.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
7941]
gi|389767878|emb|CCI06846.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
7941]
Length = 353
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 DIKD------KQFPDN----------------ELIQLIESMLE----------------- 83
++ +QF + L IE ML+
Sbjct: 70 GAQEIKTNQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|169830832|ref|YP_001716814.1| aIF-2BI family translation initiation factor [Candidatus
Desulforudis audaxviator MP104C]
gi|218526609|sp|B1I2P1.1|MTNA_DESAP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|169637676|gb|ACA59182.1| putative translation initiation factor, aIF-2BI family [Candidatus
Desulforudis audaxviator MP104C]
Length = 348
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 96/222 (43%), Gaps = 65/222 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ ++ L +LDQ LP + V ++ DA +AIK+M+VRGAPAI VG GLV+
Sbjct: 3 VEALYWKDGRLYVLDQTRLPEETVYVTCSSYRDAAEAIKTMRVRGAPAIGAVGAFGLVLG 62
Query: 64 ---------------------IKDKQFPDNELIQLIESMLEK------------------ 84
++D + L +E ML +
Sbjct: 63 ALETGGDRESFLARLREIAGVLRDTRPTAVNLDWALERMLARAVETLGEPGALRAALLAE 122
Query: 85 -------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
DI N+ +G G + + D +LTHCN G+LATA YGTALGVIR+
Sbjct: 123 AQAIVREDIEANRRMGLFGRELIPD------PARILTHCNAGALATAGYGTALGVIRAAR 176
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A K V + + GE +L AR TA + R
Sbjct: 177 EAGKQVKV-------------FAGETRPFLQGARLTAWELMR 205
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 8/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D +S + E L RPTAVN+ A + + + E P ++ L+ +++
Sbjct: 69 DRESFLARLREIAGVLRDTRPTAVNLDWALERMLARAVE-TLGEP-GALRAALLAEAQAI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+ +DI N+ +G G + + D +LTHCN G+LATA YGTALGVIR+ A K
Sbjct: 127 VREDIEANRRMGLFGRELIPD------PARILTHCNAGALATAGYGTALGVIRAAREAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 181 QVKVFAGETRPFLQGAR 197
>gi|338730562|ref|YP_004659954.1| methylthioribose-1-phosphate isomerase [Thermotoga thermarum DSM
5069]
gi|335364913|gb|AEH50858.1| methylthioribose-1-phosphate isomerase [Thermotoga thermarum DSM
5069]
Length = 347
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 80/146 (54%), Gaps = 16/146 (10%)
Query: 148 KQFP-DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
KQF ND +++ + L S RPTAVN+ A D ++ L+E +N + +I+
Sbjct: 66 KQFDGKNDEFLEFMKKVRQTLASTRPTAVNLFWALDRMEKVLNE-----SINLDRKSIIK 120
Query: 207 LIES----MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
+E M +DI N++IG +G L D + VLTHCN G+LAT +YGTA+GV
Sbjct: 121 RLEEEALKMAYEDIETNRSIGMHGQNLLKDND------TVLTHCNAGALATVDYGTAIGV 174
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
IR+ K + ETRPY QGAR
Sbjct: 175 IRAAVENGKKIRVFVDETRPYLQGAR 200
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 54/186 (29%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNE 73
L ++DQ LPH+ V E+ AIK M VRGAPAI + G V+ K ++E
Sbjct: 15 LILVDQRKLPHSKVFVHCKTFEEVAFAIKDMVVRGAPAIGVTAAFGYVLGAKQFDGKNDE 74
Query: 74 LIQLIES-----------------------------------------------MLEKDI 86
++ ++ M +DI
Sbjct: 75 FLEFMKKVRQTLASTRPTAVNLFWALDRMEKVLNESINLDRKSIIKRLEEEALKMAYEDI 134
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIVDI 145
N++IG +G L D + VLTHCN G+LAT +YGTA+GVIR ++ KI
Sbjct: 135 ETNRSIGMHGQNLLKDND------TVLTHCNAGALATVDYGTAIGVIRAAVENGKKIRVF 188
Query: 146 KDKQFP 151
D+ P
Sbjct: 189 VDETRP 194
>gi|425433730|ref|ZP_18814208.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9432]
gi|389675707|emb|CCH95209.1| Methylthioribose-1-phosphate isomerase [Microcystis aeruginosa PCC
9432]
Length = 353
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 91/190 (47%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 DIKD------KQFPDN----------------ELIQLIESMLE----------------- 83
++ +QF + L IE ML+
Sbjct: 70 GAQEIKTNQKEQFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|218526916|sp|A8YD90.1|MTNA_MICAE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|159027235|emb|CAO89330.1| mtnA [Microcystis aeruginosa PCC 7806]
Length = 353
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A + + E V + L++ ++ ++D+ +AIG
Sbjct: 91 DRLAQTRPTAVNLFWAIERMLKVARE--SGPEVAIISKNLLETAHNIQKEDVETCRAIGH 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L+ L KL +LTHCNTGSLATA YGTALGVIRS A ++ Y ETRP
Sbjct: 149 HG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRSAWTAGRLIQVYADETRPRL 205
Query: 285 QGAR 288
QGA+
Sbjct: 206 QGAK 209
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 50/190 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ + ++ + + ++DQ LP V+I + E +AI++M VRGAPAI + G+V+
Sbjct: 10 SIYPVRWQDNKVWLIDQTRLPMEYGEVEITSSEAMARAIETMIVRGAPAIGVAAAYGMVL 69
Query: 63 DIKDKQFPDNE----------------------LIQLIESMLE----------------- 83
++ + E L IE ML+
Sbjct: 70 GAQEIKTNQKEEFLADLTRIADRLAQTRPTAVNLFWAIERMLKVARESGPEVAIISKNLL 129
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L+ L + KL +LTHCNTGSLATA YGTALGVIRS
Sbjct: 130 ETAHNIQKEDVETCRAIGHHG---LLALPEQPEKLTILTHCNTGSLATASYGTALGVIRS 186
Query: 136 LHGANKIVDI 145
A +++ +
Sbjct: 187 AWTAGRLIQV 196
>gi|255021279|ref|ZP_05293328.1| Methylthioribose-1-phosphate isomerase [Acidithiobacillus caldus
ATCC 51756]
gi|340782126|ref|YP_004748733.1| methylthioribose-1-phosphate isomerase [Acidithiobacillus caldus
SM-1]
gi|254969290|gb|EET26803.1| Methylthioribose-1-phosphate isomerase [Acidithiobacillus caldus
ATCC 51756]
gi|340556279|gb|AEK58033.1| Methylthioribose-1-phosphate isomerase [Acidithiobacillus caldus
SM-1]
Length = 345
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 82/166 (49%), Gaps = 24/166 (14%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G AL A I D + N S E L ARPTAVN+ A
Sbjct: 58 TAAFGMALA-------ARAIAGTADWRESLNRSAE--------VLKRARPTAVNL---AW 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+V+ L V T L++ + +L +DI DN+ +G GA+ L + +
Sbjct: 100 AVQQQLHNAGLCDDVTTASEALLRWAQELLAQDIRDNQRMGALGAEVL------PPEGGI 153
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTGSLAT YGTALGVIR+ A + Y ETRP+ QGAR
Sbjct: 154 LTHCNTGSLATGGYGTALGVIRAGIAAGRNWRIYADETRPWLQGAR 199
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 95/230 (41%), Gaps = 65/230 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I ++ +L++LDQ LP + + VE AI+ M VRGAPAI I G+ +
Sbjct: 7 IRPIRWQNDALELLDQRQLPAQEHYLRLQEVEAVAAAIRDMVVRGAPAIGITAAFGMALA 66
Query: 64 IK--------------------------------------------DKQFPDNELIQLIE 79
+ D L++ +
Sbjct: 67 ARAIAGTADWRESLNRSAEVLKRARPTAVNLAWAVQQQLHNAGLCDDVTTASEALLRWAQ 126
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+L +DI DN+ +G GA+ L + +LTHCNTGSLAT YGTALGVIR+ A
Sbjct: 127 ELLAQDIRDNQRMGALGAEVL------PPEGGILTHCNTGSLATGGYGTALGVIRAGIAA 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLS 189
+ + Y E +L AR TA +++ D + SL+
Sbjct: 181 GR-------------NWRIYADETRPWLQGARLTAWELQK--DGIPFSLN 215
>gi|440703051|ref|ZP_20884006.1| S-methyl-5-thioribose-1-phosphate isomerase, partial [Streptomyces
turgidiscabies Car8]
gi|440275432|gb|ELP63850.1| S-methyl-5-thioribose-1-phosphate isomerase, partial [Streptomyces
turgidiscabies Car8]
Length = 406
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
+ V E + + ARPTAVN+ D V + E +A +++ ++ +D+
Sbjct: 136 QAQVREAVARIREARPTAVNLMVCVDRVMTRFEEGLEA---------VLEEAAAVQREDV 186
Query: 217 SDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
N+A+G +GA L+ G L +LTHCNTG+LATA +GTALGVIR LH ++
Sbjct: 187 EGNRAMGAHGADWLLKRVADTVGDRPLRILTHCNTGALATAGWGTALGVIRELHARGRLE 246
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP QG+R
Sbjct: 247 LVYADETRPLLQGSR 261
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 47/185 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR-------------- 47
+ L+++ + +SL ++DQ LLPH + D+ +V+ AI+ + VR
Sbjct: 64 QELRAVGWTGNSLALIDQTLLPHRHETRDVRDVDALVDAIQRLVVRGAPAIGAAGAYGVA 123
Query: 48 ------GAPAIAIVGCLGLVVDIKDKQFPDNELI-----------QLIESMLEK------ 84
G V I++ + L+ + +E++LE+
Sbjct: 124 LALLQGGREGWTQAQVREAVARIREARPTAVNLMVCVDRVMTRFEEGLEAVLEEAAAVQR 183
Query: 85 -DISDNKAIGRNGAQALIDLNPRVS------KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
D+ N+A+G +GA L+ RV+ L +LTHCNTG+LATA +GTALGVIR LH
Sbjct: 184 EDVEGNRAMGAHGADWLLK---RVADTVGDRPLRILTHCNTGALATAGWGTALGVIRELH 240
Query: 138 GANKI 142
++
Sbjct: 241 ARGRL 245
>gi|296133558|ref|YP_003640805.1| translation initiation factor, aIF-2BI family [Thermincola potens
JR]
gi|296032136|gb|ADG82904.1| translation initiation factor, aIF-2BI family [Thermincola potens
JR]
Length = 346
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 85/189 (44%), Gaps = 53/189 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ + + L++LDQ LPH V ED +AIK+MQVRGAPAI G+ +
Sbjct: 1 METMCWYEDRLELLDQTKLPHEVVYVKCFTAEDVARAIKTMQVRGAPAIGASAAFGMALA 60
Query: 63 ----DIKDKQ----------------FPDN-ELIQLIESMLEK----------------- 84
D D+Q P L IE ML K
Sbjct: 61 ALKEDDADRQKFLARMEEVGRHLAATRPTAVNLFWAIERMLAKTRELVQSGADLKEGIVQ 120
Query: 85 --------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
DI NK IG G + + +K N+LTHCN G+LATA YGTALGVIR+
Sbjct: 121 EALAIYREDIEMNKRIGHYGNEVV------PAKANILTHCNAGALATAGYGTALGVIRAA 174
Query: 137 HGANKIVDI 145
H A K + +
Sbjct: 175 HAAGKDIHV 183
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
+L + RPTAVN+ A + + + E ++ +K ++Q ++ +DI NK IG
Sbjct: 82 HLAATRPTAVNLFWAIERMLAKTRELVQSGA--DLKEGIVQEALAIYREDIEMNKRIGHY 139
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G + + +K N+LTHCN G+LATA YGTALGVIR+ H A K Y ETRP Q
Sbjct: 140 GNEVV------PAKANILTHCNAGALATAGYGTALGVIRAAHAAGKDIHVYADETRPLLQ 193
Query: 286 GAR 288
GAR
Sbjct: 194 GAR 196
>gi|15607066|ref|NP_214448.1| initiation factor eIF-2B alpha subunit [Aquifex aeolicus VF5]
gi|11131970|sp|O67879.1|MTNA_AQUAE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|2984318|gb|AAC07840.1| initiation factor eIF-2B alpha subunit [Aquifex aeolicus VF5]
Length = 456
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 50/206 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++ ++ L +LDQ LPH +++ E+ +AIK M VRGAPAI G V+
Sbjct: 132 EVKPFYWKGDKLLLLDQRKLPHQEVWLELKTYEEVAKAIKEMAVRGAPAIGCTAAYGFVL 191
Query: 63 DIK-DKQFPDN-------------ELIQLIESMLE-----------------KDISDNKA 91
+K K+ P+ L ++ M++ +D NK
Sbjct: 192 GVKVQKEDPEKVYETLKNTRPTAYNLFWALDRMMKALKEGKDIEEEAKEIEKEDYEANKR 251
Query: 92 IGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFP 151
+G G++ ++ LN + VLTHCNTG+LATA +GTALGVIRS H K + +
Sbjct: 252 MGEIGSE-IVPLNAK-----VLTHCNTGALATAGWGTALGVIRSAHYGGKNIFV------ 299
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNM 177
+V E YL AR TA +
Sbjct: 300 -------WVDETRPYLQGARLTAWEL 318
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 16/122 (13%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA N+ A D + +L E + + + + ++D NK +G G
Sbjct: 207 LKNTRPTAYNLFWALDRMMKALKE----------GKDIEEEAKEIEKEDYEANKRMGEIG 256
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
++ ++ LN VLTHCNTG+LATA +GTALGVIRS H K + ETRPY QG
Sbjct: 257 SE-IVPLNA-----KVLTHCNTGALATAGWGTALGVIRSAHYGGKNIFVWVDETRPYLQG 310
Query: 287 AR 288
AR
Sbjct: 311 AR 312
>gi|312127576|ref|YP_003992450.1| translation initiation factor, aif-2bi family [Caldicellulosiruptor
hydrothermalis 108]
gi|311777595|gb|ADQ07081.1| translation initiation factor, aIF-2BI family [Caldicellulosiruptor
hydrothermalis 108]
Length = 342
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E ++YL S+RPTAVN+ + +K E A+ + + + L+Q + ++D + N
Sbjct: 74 IYEIINYLASSRPTAVNLFWVLERMKKIFEE-ARNLSQSQIYSLLLQEARKIEDEDKNIN 132
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K IG NG LI N+LTHCN G+LAT YGTALGVIR K Y E
Sbjct: 133 KKIGENG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIREAQFTGKNIHVYVDE 186
Query: 280 TRPYNQGAR 288
TRPY QGAR
Sbjct: 187 TRPYLQGAR 195
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 88/223 (39%), Gaps = 68/223 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK + +E L +LDQ LP + + +D Y AIK M +RGAP I IV G+
Sbjct: 1 MKHFE---FENDKLIVLDQRKLPFEKEYFVCSTYQDVYVAIKDMIIRGAPLIGIVAAYGV 57
Query: 61 VVDIKD------------------------------------KQFPDNE----------L 74
V+ K+ K F + L
Sbjct: 58 VLGFKEIIEKNMEPTKIYEIINYLASSRPTAVNLFWVLERMKKIFEEARNLSQSQIYSLL 117
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + ++D + NK IG NG LI N+LTHCN G+LAT YGTALGVIR
Sbjct: 118 LQEARKIEDEDKNINKKIGENG-NTLIK-----EGANILTHCNAGALATGGYGTALGVIR 171
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
K + + YV E YL AR TA +
Sbjct: 172 EAQFTGKNIHV-------------YVDETRPYLQGARLTAFEL 201
>gi|67925064|ref|ZP_00518443.1| Putative translation initiation factor, aIF-2BI:Initiation factor
2B alpha/beta/delta [Crocosphaera watsonii WH 8501]
gi|67853087|gb|EAM48467.1| Putative translation initiation factor, aIF-2BI:Initiation factor
2B alpha/beta/delta [Crocosphaera watsonii WH 8501]
Length = 350
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 91/189 (48%), Gaps = 50/189 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +++ + + ++DQ LP LV+I+ ED +AIK+M VRGAPAI + G+
Sbjct: 1 MTTIYPVVWSNNKVLLIDQTCLPSQYTLVEISRYEDMAKAIKTMIVRGAPAIGVATAYGM 60
Query: 61 VVDIKD----------KQFPD-------------------------------------NE 73
+ ++ KQ + N
Sbjct: 61 YLGAREINTKERETFLKQLEEVAEILRQTRPTAVNLFWAISRMLKIAYETIGTVEEIKNT 120
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ E + +D+ + IG+N Q +I NP KL++LTHCN G+LATA YGTALGVI
Sbjct: 121 LLETAEKINAEDLQTCQDIGKNSLQ-IIPPNP--DKLSILTHCNAGALATAGYGTALGVI 177
Query: 134 RSLHGANKI 142
RS+ A ++
Sbjct: 178 RSVWTAGRL 186
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ ++ K + E + L RPTAVN+ A + E V +K L++ E +
Sbjct: 71 ERETFLKQLEEVAEILRQTRPTAVNLFWAISRMLKIAYE--TIGTVEEIKNTLLETAEKI 128
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D+ + IG+N Q +I NP KL++LTHCN G+LATA YGTALGVIRS+ A +
Sbjct: 129 NAEDLQTCQDIGKNSLQ-IIPPNP--DKLSILTHCNAGALATAGYGTALGVIRSVWTAGR 185
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGA+
Sbjct: 186 LKRVYADETRPRLQGAK 202
>gi|354558630|ref|ZP_08977884.1| Methylthioribose-1-phosphate isomerase [Desulfitobacterium
metallireducens DSM 15288]
gi|353545692|gb|EHC15142.1| Methylthioribose-1-phosphate isomerase [Desulfitobacterium
metallireducens DSM 15288]
Length = 345
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+ Y+ + L RPTAVN+ A ++ L + + ++ ++ L+ ES+ E D
Sbjct: 71 FQDYMNTVKERLTKTRPTAVNLFWALRRMEDRLRDLYEVEDLDEIRKALVVEAESIAEDD 130
Query: 216 ISDNKAIGRNGAQALIDLNPGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
IG G NP V + N+LTHCN G+LAT EYGTALGVIR+ H K
Sbjct: 131 RRVCHLIGEQG-------NPIVPEEANILTHCNAGALATVEYGTALGVIRAAHQMGKNIH 183
Query: 275 AYCTETRPYNQGAR 288
Y ETRP+ QGAR
Sbjct: 184 VYADETRPFLQGAR 197
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 21/102 (20%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
ES+ E D IG G NP V + N+LTHCN G+LAT EYGTALGVIR+ H
Sbjct: 124 ESIAEDDRRVCHLIGEQG-------NPIVPEEANILTHCNAGALATVEYGTALGVIRAAH 176
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K + + Y E +L AR T + +
Sbjct: 177 QMGKNIHV-------------YADETRPFLQGARLTTFELMK 205
>gi|225848433|ref|YP_002728596.1| S-methyl-5-thioribose-1-phosphate isomerase [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643507|gb|ACN98557.1| S-methyl-5-thioribose-1-phosphate isomerase [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 340
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 58/215 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ + + + L +++QL LPH + V ++N+ED +AIK M VRGAP I IVG G
Sbjct: 4 LKDIRPLEFREDFLFVINQLKLPHELQWVKLSNLEDYEKAIKDMVVRGAPLIGIVGAYGF 63
Query: 61 VVDIKDKQFPDNE--------------LIQLIESMLE----------------------- 83
IK+ P E L ++ ML
Sbjct: 64 YQGIKEG-IPAQEAYQRLKNTRPTAVNLFWALDRMLNFYLKYKEDSDILRKLLKEAQRIE 122
Query: 84 -KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D N+ IG G + LI N N+LTHCNTG+LATA +GTALG+IRS K
Sbjct: 123 LEDYHANRMIGGYG-EVLIPDNS-----NILTHCNTGALATAGWGTALGIIRSAWENGKD 176
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ + YV E YL +R TA +
Sbjct: 177 ITV-------------YVDETRPYLQGSRLTAWEL 198
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E L + RPTAVN+ A D + L+ + K + + +L++ + + +D N+
Sbjct: 75 EAYQRLKNTRPTAVNLFWALDRM---LNFYLKYKEDSDILRKLLKEAQRIELEDYHANRM 131
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IG G + LI N N+LTHCNTG+LATA +GTALG+IRS K Y ETR
Sbjct: 132 IGGYG-EVLIPDNS-----NILTHCNTGALATAGWGTALGIIRSAWENGKDITVYVDETR 185
Query: 282 PYNQGAR 288
PY QG+R
Sbjct: 186 PYLQGSR 192
>gi|49259287|pdb|1T9K|A Chain A, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related
Translation Initiation Factor [thermotoga Maritima]
gi|49259288|pdb|1T9K|B Chain B, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related
Translation Initiation Factor [thermotoga Maritima]
gi|49259289|pdb|1T9K|C Chain C, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related
Translation Initiation Factor [thermotoga Maritima]
gi|49259290|pdb|1T9K|D Chain D, X-ray Crystal Structure Of Aif-2b Alpha Subunit-related
Translation Initiation Factor [thermotoga Maritima]
Length = 347
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 95/214 (44%), Gaps = 62/214 (28%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD-- 66
+ +SLK+LDQ LP + V+ E+ AIK VRGAPAI + G V+ ++D
Sbjct: 12 WSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEXIVRGAPAIGVAAAFGYVLGLRDYK 71
Query: 67 ---------------------------------KQFPDN----ELIQLIESMLEK----D 85
K F +N L +++E+ K D
Sbjct: 72 TGSLTDWXKQVKETLARTRPTAVNLFWALNRXEKVFFENADRENLFEILENEALKXAYED 131
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
I NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ + K + +
Sbjct: 132 IEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAVESGKRIRV 185
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ E YL AR TA + +
Sbjct: 186 -------------FADETRPYLQGARLTAWELXK 206
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
SL + + + L RPTAVN+ A + + E N + L +++E+ K
Sbjct: 74 SLTDWXKQVKETLARTRPTAVNLFWALNRXEKVFFE-------NADRENLFEILENEALK 126
Query: 215 ----DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
DI NKAIG+NGAQ + D + +LTHCN G+LAT +YGTALGVIR+ +
Sbjct: 127 XAYEDIEVNKAIGKNGAQLIKDGS------TILTHCNAGALATVDYGTALGVIRAAVESG 180
Query: 271 KIGAAYCTETRPYNQGAR 288
K + ETRPY QGAR
Sbjct: 181 KRIRVFADETRPYLQGAR 198
>gi|118398893|ref|XP_001031773.1| 5-methylthioribose kinase family protein [Tetrahymena thermophila]
gi|89286107|gb|EAR84110.1| 5-methylthioribose kinase family protein [Tetrahymena thermophila
SB210]
Length = 779
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTR 203
++ ++ F + L KYV + ++YL ++RPTAVN++ + V+ ++ +++ V +
Sbjct: 64 ELFNRDFKSVEELRKYVLQAVEYLRTSRPTAVNLQNDTERVRQTVIDFSLQQSVEEISQL 123
Query: 204 LIQL------IESMLEKDISDNKAIGRNGAQALI----DLNPGVS----KLNVLTHCNTG 249
I+S ++ I + + G A+I + +P + KL VLT CNTG
Sbjct: 124 QQLKQQLFQLIDSFNQQYIDACRQMSILGVDAIIKDFEEKHPEQAGQNAKLKVLTICNTG 183
Query: 250 SLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LAT GTALG++R LH ++ Y ETRPYNQGAR
Sbjct: 184 KLATPGDGTALGIVRELHRRGRLERLYIAETRPYNQGAR 222
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MKSLQSIIYE-KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
M+ Q+ E +LDQL LP T + + IN +EDA++ IK M VRGAP IA+V G
Sbjct: 1 MEKFQTFRREVDDHFYVLDQLKLPLTIEEIRINTIEDAWKVIKDMNVRGAPLIAVVATQG 60
Query: 60 LVVDIKDKQF 69
L ++ ++ F
Sbjct: 61 LRNELFNRDF 70
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 15/68 (22%)
Query: 108 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDY 166
+KL VLT CNTG LAT GTALG++R LH + LE+ Y+ E Y
Sbjct: 172 AKLKVLTICNTGKLATPGDGTALGIVRELHRRGR--------------LERLYIAETRPY 217
Query: 167 LVSARPTA 174
AR TA
Sbjct: 218 NQGARLTA 225
>gi|117925241|ref|YP_865858.1| translation initiation factor 2subunit beta I [Magnetococcus
marinus MC-1]
gi|218526913|sp|A0L909.1|MTNA_MAGSM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|117608997|gb|ABK44452.1| methylthioribose-1-phosphate isomerase [Magnetococcus marinus MC-1]
Length = 352
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ E + L +RPTAVN+ A + + L + +P + V RL+Q ++ E+DI+
Sbjct: 82 MAEGMATLRQSRPTAVNLTWALERMAPLL----ETTPPHEVPQRLLQEAHAIREEDIASC 137
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG-AAYCT 278
+A+G +GA AL+ N + ++THCN G+LATA YGTALGVIR+ H A +
Sbjct: 138 RAMGAHGA-ALLPTNSQRPTV-IMTHCNAGALATAGYGTALGVIRAAHTAQQGNLRVIAN 195
Query: 279 ETRPYNQGAR 288
ETRPY QGAR
Sbjct: 196 ETRPYLQGAR 205
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 90/213 (42%), Gaps = 60/213 (28%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD---- 66
+H ++LDQ LP+ + + + I+ M VRGAPAI G+ V+ K
Sbjct: 13 EHCARMLDQRRLPNEVVNLYYRSAAEMADGIRDMVVRGAPAIGCACAYGVAVEAKRLAKQ 72
Query: 67 --------------------------------------KQFPDNE----LIQLIESMLEK 84
+ P +E L+Q ++ E+
Sbjct: 73 GIPSHWPTAMAEGMATLRQSRPTAVNLTWALERMAPLLETTPPHEVPQRLLQEAHAIREE 132
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVD 144
DI+ +A+G +GA AL+ N + + ++THCN G+LATA YGTALGVIR+ H A +
Sbjct: 133 DIASCRAMGAHGA-ALLPTNSQRPTV-IMTHCNAGALATAGYGTALGVIRAAHTAQQ--- 187
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+L E YL AR TA +
Sbjct: 188 ---------GNLRVIANETRPYLQGARLTAWEL 211
>gi|333979672|ref|YP_004517617.1| methylthioribose-1-phosphate isomerase [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333823153|gb|AEG15816.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 355
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 13/130 (10%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV---NTVKTRLIQLIESMLEKDISD 218
E D L S RPTAVN+ A + + + L +ASPV + LI ++ +D+
Sbjct: 78 EVADVLASTRPTAVNLTWALNRLLARL----EASPVADPEELTELLINEAHTIYREDLEG 133
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
NK IG+ G + L P ++ +LTHCN G+LATA YGTALGVIR+ H A K + Y
Sbjct: 134 NKRIGQFGQE----LVPRGAR--ILTHCNAGALATAGYGTALGVIRAAHEAGKQVSVYAG 187
Query: 279 ETRPYNQGAR 288
ETRP QGAR
Sbjct: 188 ETRPLLQGAR 197
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 53/100 (53%), Gaps = 19/100 (19%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
LI ++ +D+ NK IG+ G + L PR ++ +LTHCN G+LATA YGTALGVI
Sbjct: 119 LINEAHTIYREDLEGNKRIGQFGQE----LVPRGAR--ILTHCNAGALATAGYGTALGVI 172
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPT 173
R+ H A K V + Y GE L AR T
Sbjct: 173 RAAHEAGKQVSV-------------YAGETRPLLQGARLT 199
>gi|406701992|gb|EKD05063.1| methylthioribose-1-phosphate isomerase [Trichosporon asahii var.
asahii CBS 8904]
Length = 241
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 12/133 (9%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASP--VNTVKTRLIQLIESMLEKDISDNKA 221
LDYL S+RPTAVN+ A D ++ L ++P +++VK + ++ +D++ N+
Sbjct: 90 LDYLQSSRPTAVNLGEAMDRIRRLLEASPASAPALLDSVK----ETCYAVHNEDLARNRE 145
Query: 222 IGRNGAQALIDLNPGVSK------LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+G GA+ L +K L V+T CNTGSLAT+ YGTA+GVI +L A+++ A
Sbjct: 146 MGCLGAEWLWSQRGEAAKAAGKKGLKVITVCNTGSLATSGYGTAIGVITALFEADELDTA 205
Query: 276 YCTETRPYNQGAR 288
Y +T PY+QG+R
Sbjct: 206 YYAQTTPYHQGSR 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 57/197 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC--- 57
M SL+ + + +++I+DQL LPH + E+A+ AIKSM++RGAPAIA +
Sbjct: 8 MTSLR--VSDNGAVEIIDQLRLPHEVVCEPVKTPEEAFDAIKSMKIRGAPAIASLAALAI 65
Query: 58 ----------LGLVVDIKDKQFPDNELIQ-----------------------------LI 78
L + D+K P + +Q L+
Sbjct: 66 RQHLMTDAPKLESIEDVKAHLLPMLDYLQSSRPTAVNLGEAMDRIRRLLEASPASAPALL 125
Query: 79 ESMLE-------KDISDNKAIGRNGAQALIDLNPRVSK------LNVLTHCNTGSLATAE 125
+S+ E +D++ N+ +G GA+ L +K L V+T CNTGSLAT+
Sbjct: 126 DSVKETCYAVHNEDLARNREMGCLGAEWLWSQRGEAAKAAGKKGLKVITVCNTGSLATSG 185
Query: 126 YGTALGVIRSLHGANKI 142
YGTA+GVI +L A+++
Sbjct: 186 YGTAIGVITALFEADEL 202
>gi|374296343|ref|YP_005046534.1| methylthioribose-1-phosphate isomerase [Clostridium clariflavum DSM
19732]
gi|359825837|gb|AEV68610.1| methylthioribose-1-phosphate isomerase [Clostridium clariflavum DSM
19732]
Length = 344
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D + + + D + S RPTAVN+ A D V + K + ++ +I+ ++E
Sbjct: 70 DEFFEELKKACDLIKSTRPTAVNLFWAVDRVYNKAVS-NKDKSIEQIR-EIIEAEARLME 127
Query: 214 K-DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
K DI N+AIG+ G + LI N +LTHCN G+LAT +YGTALGVIR+ H A K
Sbjct: 128 KEDIESNRAIGKYGNE-LIKQN-----YTILTHCNAGALATCDYGTALGVIRAAHEAGKN 181
Query: 273 GAAYCTETRPYNQGAR 288
+ + ETRPY QG+R
Sbjct: 182 ISVFADETRPYLQGSR 197
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++ + Y LK++DQ LP K+V+++ E+ AIK M VRGAPAI + G+VV
Sbjct: 1 MRPLEYCNGVLKLVDQTKLPLEKKIVELSTYEEIADAIKKMTVRGAPAIGVTAVYGVVVA 60
Query: 63 ------DIKDKQFPD----------------------------------------NELIQ 76
KD+ F + E+I+
Sbjct: 61 ANSINTSSKDEFFEELKKACDLIKSTRPTAVNLFWAVDRVYNKAVSNKDKSIEQIREIIE 120
Query: 77 LIESMLEK-DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++EK DI N+AIG+ G + LI N +LTHCN G+LAT +YGTALGVIR+
Sbjct: 121 AEARLMEKEDIESNRAIGKYGNE-LIKQN-----YTILTHCNAGALATCDYGTALGVIRA 174
Query: 136 LHGANKIVDI 145
H A K + +
Sbjct: 175 AHEAGKNISV 184
>gi|403746369|ref|ZP_10954902.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
hesperidum URH17-3-68]
gi|403120700|gb|EJY55054.1| translation initiation factor, aIF-2BI family [Alicyclobacillus
hesperidum URH17-3-68]
Length = 343
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L SARPTAVN+ +A D++ + L + A + + L ++ + D++ N+ IG G
Sbjct: 81 LRSARPTAVNLAQALDAMLAVLEQTAD----DAIADALYAKAVAIADADVATNRRIGAFG 136
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A +I + G +LTHCNTGSLAT EYGTALGVIR+LH +G Y ETRPY QG
Sbjct: 137 AD-VIAQHGG----RILTHCNTGSLATVEYGTALGVIRALHERGILGHVYVDETRPYLQG 191
Query: 287 AR 288
AR
Sbjct: 192 AR 193
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 45/89 (50%), Gaps = 18/89 (20%)
Query: 89 NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDK 148
N+ IG GA + R+ LTHCNTGSLAT EYGTALGVIR+LH + +
Sbjct: 129 NRRIGAFGADVIAQHGGRI-----LTHCNTGSLATVEYGTALGVIRALHERGILGHV--- 180
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
YV E YL AR TA +
Sbjct: 181 ----------YVDETRPYLQGARLTAYEL 199
>gi|288818063|ref|YP_003432411.1| translation initiation factor 2B subunit I family [Hydrogenobacter
thermophilus TK-6]
gi|384128827|ref|YP_005511440.1| translation initiation factor, aIF-2BI family [Hydrogenobacter
thermophilus TK-6]
gi|288787463|dbj|BAI69210.1| translation initiation factor 2B subunit I family [Hydrogenobacter
thermophilus TK-6]
gi|308751664|gb|ADO45147.1| translation initiation factor, aIF-2BI family [Hydrogenobacter
thermophilus TK-6]
Length = 317
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 50/205 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++ +E L +LDQ LP +++ + + +AIK M VRGAPAI V G V+
Sbjct: 2 EVRAFYWEDDHLLLLDQRELPQKEVWLELRDHKAVAKAIKEMAVRGAPAIGCVAAYGFVL 61
Query: 63 DIKDKQFPDN-------------ELIQLIESMLE-----KDISD------------NKAI 92
+K K+ P L ++ M++ +DI++ N+ +
Sbjct: 62 GVK-KEDPQKVYEVLKSTRPTAYNLFWALDRMMKALKEGRDITEEAISIEREDYEANRRM 120
Query: 93 GRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPD 152
G G+Q + D + VLTHCNTG+LATA +GTALGVIRS H + K + +
Sbjct: 121 GEIGSQFIDD------GMRVLTHCNTGALATAGWGTALGVIRSAHYSGKRIHV------- 167
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNM 177
+V E Y+ AR TA +
Sbjct: 168 ------FVNETRPYMQGARLTAWEL 186
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 67/124 (54%), Gaps = 16/124 (12%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L S RPTA N+ A D + +L E + + S+ +D N+ +G
Sbjct: 73 EVLKSTRPTAYNLFWALDRMMKALKE----------GRDITEEAISIEREDYEANRRMGE 122
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G+Q + D + VLTHCNTG+LATA +GTALGVIRS H + K + ETRPY
Sbjct: 123 IGSQFIDD------GMRVLTHCNTGALATAGWGTALGVIRSAHYSGKRIHVFVNETRPYM 176
Query: 285 QGAR 288
QGAR
Sbjct: 177 QGAR 180
>gi|125973139|ref|YP_001037049.1| translation initiation factor 2B subunit I [Clostridium
thermocellum ATCC 27405]
gi|256003935|ref|ZP_05428921.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum DSM 2360]
gi|281417332|ref|ZP_06248352.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum JW20]
gi|385778954|ref|YP_005688119.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum DSM 1313]
gi|419723030|ref|ZP_14250165.1| Methylthioribose-1-phosphate isomerase [Clostridium thermocellum
AD2]
gi|419725066|ref|ZP_14252121.1| Methylthioribose-1-phosphate isomerase [Clostridium thermocellum
YS]
gi|218526603|sp|A3DD27.1|MTNA_CLOTH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|125713364|gb|ABN51856.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum ATCC 27405]
gi|255992063|gb|EEU02159.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum DSM 2360]
gi|281408734|gb|EFB38992.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum JW20]
gi|316940634|gb|ADU74668.1| translation initiation factor, aIF-2BI family [Clostridium
thermocellum DSM 1313]
gi|380771686|gb|EIC05551.1| Methylthioribose-1-phosphate isomerase [Clostridium thermocellum
YS]
gi|380780797|gb|EIC10460.1| Methylthioribose-1-phosphate isomerase [Clostridium thermocellum
AD2]
Length = 342
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 152 DNDSLEKYVGE---KLDYLVSARPTAVNMKRAADSVKS-SLSEWAKASPVNTVKTRLIQL 207
+ DS E++ E D + S RPTAVN+ A D V S ++S K
Sbjct: 65 NTDSKEEFFAELAKVCDIIKSTRPTAVNLFWAVDRVYSRAVSNRDKTIEEIKKLIEEEAY 124
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+ M ++DI N++IGR G + LI N +LTHCN G+LAT +YGTALGVIR+ H
Sbjct: 125 L--MEKEDIESNRSIGRFGNE-LIKEN-----WTILTHCNAGALATCDYGTALGVIRAAH 176
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ K + ETRPY QGAR
Sbjct: 177 ESGKNIQVFADETRPYLQGAR 197
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 102/225 (45%), Gaps = 70/225 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK L+ Y LK+LDQ LLP K+V++ N + AIK+M VRGAPAI + G+
Sbjct: 1 MKPLE---YCNGVLKLLDQTLLPGEQKIVELKNYIEVADAIKNMIVRGAPAIGVTAAYGV 57
Query: 61 VV-------DIKDKQFPD-NELIQLIES-------------------------------- 80
+ D K++ F + ++ +I+S
Sbjct: 58 AIASKAINTDSKEEFFAELAKVCDIIKSTRPTAVNLFWAVDRVYSRAVSNRDKTIEEIKK 117
Query: 81 --------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
M ++DI N++IGR G + LI N +LTHCN G+LAT +YGTALGV
Sbjct: 118 LIEEEAYLMEKEDIESNRSIGRFGNE-LIKEN-----WTILTHCNAGALATCDYGTALGV 171
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IR+ H + K +++ + E YL AR TA +
Sbjct: 172 IRAAHESGK-------------NIQVFADETRPYLQGARLTAWEL 203
>gi|409993129|ref|ZP_11276283.1| methylthioribose-1-phosphate isomerase [Arthrospira platensis str.
Paraca]
gi|409936003|gb|EKN77513.1| methylthioribose-1-phosphate isomerase [Arthrospira platensis str.
Paraca]
Length = 369
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + + + E + V+ + L+ + + +D++ +AIG +G
Sbjct: 106 LGNTRPTAVNLFWAIERMLKTARE--TSVSVSEIPQVLLAEAQKIQTEDLNTCQAIGDHG 163
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A++ P +LN+LTHCNTGSLATA YGTALGVIRS A ++G Y ETRP QG
Sbjct: 164 L-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAAQRLGRVYADETRPRLQG 220
Query: 287 AR 288
A+
Sbjct: 221 AK 222
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ L H +V+I ED +AI +M VRGAPAI I G+ + +D
Sbjct: 27 VIWHEDRVLLIDQTRLSHEYAIVEIKRYEDMARAIATMIVRGAPAIGIAAAYGMYLGARD 86
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q D L IE ML+
Sbjct: 87 IQKSDRHGFLAELEGVAKILGNTRPTAVNLFWAIERMLKTARETSVSVSEIPQVLLAEAQ 146
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS A
Sbjct: 147 KIQTEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAA 203
Query: 140 NKI 142
++
Sbjct: 204 QRL 206
>gi|374317343|ref|YP_005063771.1| S-methyl-5-thioribose-1-phosphate isomerase [Sphaerochaeta
pleomorpha str. Grapes]
gi|359352987|gb|AEV30761.1| S-methyl-5-thioribose-1-phosphate isomerase [Sphaerochaeta
pleomorpha str. Grapes]
Length = 350
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
K+F E + +L ARPTAVN+K A D + + E AK P+ + L
Sbjct: 66 KEFAGEKDFETKFKQACAFLSLARPTAVNLKWAIDRMLGTY-EKAKKLPIEQIIALLKTD 124
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+++ +DI+ NK IGR G + + +LTHCNTG+LATA +GTALGVI++
Sbjct: 125 ADAIRSEDIATNKEIGRIGNTVV------PANATILTHCNTGALATAGWGTALGVIKTAF 178
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+K Y ETRP QG+R
Sbjct: 179 YDDKNIFVYADETRPRFQGSR 199
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 95/225 (42%), Gaps = 65/225 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
++ ++ Y + L ++DQ +LP T L N +D +I+ M VRGAPAI G+
Sbjct: 3 ETFITLEYREEKLFLIDQRVLPTTFTLFVCNTYKDVEFSIRDMVVRGAPAIGATAAYGVY 62
Query: 62 VDIKD------------------------------------------KQFPDNELIQLI- 78
+ K+ K+ P ++I L+
Sbjct: 63 MAAKEFAGEKDFETKFKQACAFLSLARPTAVNLKWAIDRMLGTYEKAKKLPIEQIIALLK 122
Query: 79 ---ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+++ +DI+ NK IGR G + + +LTHCNTG+LATA +GTALGVI++
Sbjct: 123 TDADAIRSEDIATNKEIGRIGNTVV------PANATILTHCNTGALATAGWGTALGVIKT 176
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
F D+ ++ Y E +R TA + +A
Sbjct: 177 -------------AFYDDKNIFVYADETRPRFQGSRLTAWELMQA 208
>gi|329765984|ref|ZP_08257546.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137533|gb|EGG41807.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 353
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+K D + S + + +K +I + M E+DI NK++G+NG
Sbjct: 94 LFETRPTAVNLKWGLDKIMKVASS---GNTIEQIKQSVINESKKMAEEDIEINKSMGKNG 150
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D N ++THCN G+LAT YGTALGVIR+ + K TETRP QG
Sbjct: 151 S-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRATRESGKNVKVIATETRPIQQG 204
Query: 287 AR 288
+R
Sbjct: 205 SR 206
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+++ ++ + + ++DQ LP+ V ++ AI+++ VRGAPAI + G GL +
Sbjct: 11 SLRTVEWKDNKVIMIDQTKLPNQLVFVTYDDFNQVADAIRTLVVRGAPAIGVSGAFGLAL 70
Query: 63 -DIKDKQFPDNELIQLIES----------------------------------------- 80
++ K EL+ +E
Sbjct: 71 ASLQSKSTTKEELLSDLEKARKILFETRPTAVNLKWGLDKIMKVASSGNTIEQIKQSVIN 130
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
M E+DI NK++G+NG+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 131 ESKKMAEEDIEINKSMGKNGS-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRAT 184
Query: 137 HGANKIVDI 145
+ K V +
Sbjct: 185 RESGKNVKV 193
>gi|291565925|dbj|BAI88197.1| translation initiation factor IF-2B alpha subunit [Arthrospira
platensis NIES-39]
Length = 350
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + + + E + V+ + L+ + + +D++ +AIG +G
Sbjct: 87 LGNTRPTAVNLFWAIERMLKTARE--TSVSVSEIPQVLLAEAQKIQTEDLNTCQAIGDHG 144
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A++ P +LN+LTHCNTGSLATA YGTALGVIRS A ++G Y ETRP QG
Sbjct: 145 L-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAAQRLGRVYADETRPRLQG 201
Query: 287 AR 288
A+
Sbjct: 202 AK 203
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 86/183 (46%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ L H +V+I ED +AI +M VRGAPAI I G+ + +D
Sbjct: 8 VIWHEDRVLLIDQTRLSHEYAIVEIKRYEDMARAIATMIVRGAPAIGIAAAYGMYLGARD 67
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q D L IE ML+
Sbjct: 68 IQKSDRHGFLAELEGVAKILGNTRPTAVNLFWAIERMLKTARETSVSVSEIPQVLLAEAQ 127
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D++ +AIG +G A++ P +LN+LTHCNTGSLATA YGTALGVIRS A
Sbjct: 128 KIQTEDLNTCQAIGDHGL-AVLPKTP--EQLNILTHCNTGSLATAGYGTALGVIRSCKAA 184
Query: 140 NKI 142
++
Sbjct: 185 QRL 187
>gi|389798956|ref|ZP_10201964.1| methylthioribose-1-phosphate isomerase [Rhodanobacter sp. 116-2]
gi|388444311|gb|EIM00431.1| methylthioribose-1-phosphate isomerase [Rhodanobacter sp. 116-2]
Length = 339
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A D +K ++ A R Q I++ +D++ N+ +G
Sbjct: 81 LAMLRAARPTAVNLMWALDRMKKRIA----AGADAGALLREAQAIQN---EDLAANRRMG 133
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA A I GV LTHCNTGSLATA YGTALGVIR+ A +I Y ETRP+
Sbjct: 134 ELGA-ARISTGSGV-----LTHCNTGSLATAGYGTALGVIRAGVAAGRIARVYAGETRPW 187
Query: 284 NQGAR 288
QGAR
Sbjct: 188 QQGAR 192
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 58/240 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------- 47
S++++ ++ L++LDQ LLP + +D + QAI+ + VR
Sbjct: 10 SIRAVQWQGDHLRLLDQRLLPGEERWIDCRDAAQVTQAIRDLAVRGAPAIGIAAAWGVAM 69
Query: 48 ----GAPAIAIVGCLG----------LVVDIKDKQFPDNELIQLI----ESMLEKDISDN 89
GAP ++ L +D K+ + +++ +D++ N
Sbjct: 70 AAQQGAPLEPVLAMLRAARPTAVNLMWALDRMKKRIAAGADAGALLREAQAIQNEDLAAN 129
Query: 90 KAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDK 148
+ +G GA R+S VLTHCNTGSLATA YGTALGVIR+ A +I +
Sbjct: 130 RRMGELGA-------ARISTGSGVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARV--- 179
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
Y GE + AR T + R D + + L A ++ + +K+ +Q +
Sbjct: 180 ----------YAGETRPWQQGARLTMWELVR--DGIPAQLI--ADSAAAHLMKSGAVQWV 225
>gi|392426865|ref|YP_006467859.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus
acidiphilus SJ4]
gi|391356828|gb|AFM42527.1| methylthioribose-1-phosphate isomerase [Desulfosporosinus
acidiphilus SJ4]
Length = 345
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D + L+ ++ L RPTAVN+ A ++ L E + ++ V+ LI+ +++
Sbjct: 67 DREGLKDFMEVVQTRLAQTRPTAVNLFWALRRMEDRLRESREIEDLDDVRKALIEEADNI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D N+ IG G + + + K N+LTHCN G+LAT EYGTAL VIR H + K
Sbjct: 127 AEDDRRMNRLIGELGNEIVPE------KSNILTHCNAGALATVEYGTALSVIRIAHSSGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 181 AIRVYADETRPLLQGAR 197
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
LI+ +++ E D N+ IG G + + + K N+LTHCN G+LAT EYGTAL VI
Sbjct: 119 LIEEADNIAEDDRRMNRLIGELGNEIVPE------KSNILTHCNAGALATVEYGTALSVI 172
Query: 134 RSLHGANKIVDI 145
R H + K + +
Sbjct: 173 RIAHSSGKAIRV 184
>gi|87308331|ref|ZP_01090472.1| putative translation initiation factor [Blastopirellula marina DSM
3645]
gi|87288888|gb|EAQ80781.1| putative translation initiation factor [Blastopirellula marina DSM
3645]
Length = 358
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIES 210
D + K + E DYL +RPTAVN+ A D +K + + + + ++ L++ ++
Sbjct: 79 DAAAFWKRLDEVTDYLAGSRPTAVNLFWALDRMKRVAHQLRDSGTSITDIRIALLEEAKA 138
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+ +D +AIGR+GA AL G S N LTHCN G LATA+YGTAL V +L
Sbjct: 139 IHAEDRETCRAIGRHGATAL----AGAS--NFLTHCNAGGLATADYGTALAVFFTLQDDG 192
Query: 271 KIGAAYCTETRPYNQGAR 288
K + ETRP QGAR
Sbjct: 193 KDLHVFVDETRPLLQGAR 210
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 69/217 (31%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
+L ++DQ LLP L+ +VE ++AIK ++VRGAPAI I G+V+ ++
Sbjct: 21 TLDLIDQTLLPVELTLITCRDVETVWEAIKLLRVRGAPAIGIAAAYGVVIGMQTVGDDDA 80
Query: 67 -----------------------------------KQFPDN---------ELIQLIESML 82
Q D+ L++ +++
Sbjct: 81 AAFWKRLDEVTDYLAGSRPTAVNLFWALDRMKRVAHQLRDSGTSITDIRIALLEEAKAIH 140
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D +AIGR+GA AL + N LTHCN G LATA+YGTAL V +L
Sbjct: 141 AEDRETCRAIGRHGATALAGAS------NFLTHCNAGGLATADYGTALAVFFTLQ----- 189
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
D L +V E L AR TA + +
Sbjct: 190 --------DDGKDLHVFVDETRPLLQGARLTAWELAQ 218
>gi|386815607|ref|ZP_10102825.1| Methylthioribose-1-phosphate isomerase [Thiothrix nivea DSM 5205]
gi|386420183|gb|EIJ34018.1| Methylthioribose-1-phosphate isomerase [Thiothrix nivea DSM 5205]
Length = 351
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 82/141 (58%), Gaps = 13/141 (9%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
KQ+P + + +++ L +ARPTAVN+ A + + + + P + L+ L
Sbjct: 77 KQYPSD--WRNRLEAEIETLRNARPTAVNLMWALKRMCAEVEN-VQGDP----EEPLLAL 129
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+ + ++DI N +G G+ ALI+ P S VLTHCNTGSLAT YGTALGVIRS +
Sbjct: 130 AQRLHQEDIDANYRMGELGS-ALIE--PSHS---VLTHCNTGSLATGGYGTALGVIRSAY 183
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ KI Y ETRP+ QG+R
Sbjct: 184 SSGKIEHVYADETRPWWQGSR 204
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 50/184 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA------------- 49
S++++ ++ + L +LDQ LPH + V + + ED +AI++M VRGA
Sbjct: 11 SIRAVEWKDNHLVLLDQRKLPHNEQFVQLYSAEDTAEAIRNMVVRGAPAIGIAAAYAVVM 70
Query: 50 -----------------------------PAIAIVGCLG-LVVDIKDKQF-PDNELIQLI 78
A+ ++ L + ++++ Q P+ L+ L
Sbjct: 71 AARKSYKQYPSDWRNRLEAEIETLRNARPTAVNLMWALKRMCAEVENVQGDPEEPLLALA 130
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+ + ++DI N +G G+ ALI+ +VLTHCNTGSLAT YGTALGVIRS +
Sbjct: 131 QRLHQEDIDANYRMGELGS-ALIE-----PSHSVLTHCNTGSLATGGYGTALGVIRSAYS 184
Query: 139 ANKI 142
+ KI
Sbjct: 185 SGKI 188
>gi|94968204|ref|YP_590252.1| translation initiation factor 2B subunit I [Candidatus Koribacter
versatilis Ellin345]
gi|218526587|sp|Q1ISH2.1|MTNA_ACIBL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|94550254|gb|ABF40178.1| methylthioribose-1-phosphate isomerase [Candidatus Koribacter
versatilis Ellin345]
Length = 354
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 85/166 (51%), Gaps = 20/166 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA G ALGV +D + L + G + RPTAVN+ A
Sbjct: 57 TAAMGIALGV-------------RDAKASTLSELRQMFGMICRTMGETRPTAVNLFWAIR 103
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ E + P+ +K ++ + + +DI+ N+A+GRNGA L P S+ V
Sbjct: 104 RMQRKFEELSNM-PLAVIKAEMVFEAKRIHLEDIAANQAMGRNGAV----LMP--SEGGV 156
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN G+LATA YGTALGVIR+ + K + ETRP+ QGAR
Sbjct: 157 LTHCNAGALATAGYGTALGVIRAAVESGKNIRVFADETRPFLQGAR 202
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 82/180 (45%), Gaps = 54/180 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + + ++DQ LP V E+ AIK M VRGAPAI + +G+ +
Sbjct: 6 IKTVEWSDEGVVLVDQTKLPTEEVYVTCGTYEEVAVAIKDMIVRGAPAIGVTAAMGIALG 65
Query: 64 IKD-KQFPDNELIQLI-----------------------------------------ESM 81
++D K +EL Q+ E +
Sbjct: 66 VRDAKASTLSELRQMFGMICRTMGETRPTAVNLFWAIRRMQRKFEELSNMPLAVIKAEMV 125
Query: 82 LE------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E +DI+ N+A+GRNGA L P S+ VLTHCN G+LATA YGTALGVIR+
Sbjct: 126 FEAKRIHLEDIAANQAMGRNGAV----LMP--SEGGVLTHCNAGALATAGYGTALGVIRA 179
>gi|357404856|ref|YP_004916780.1| methylthioribose-1-phosphate isomerase [Methylomicrobium
alcaliphilum 20Z]
gi|351717521|emb|CCE23186.1| Methylthioribose-1-phosphate isomerase [Methylomicrobium
alcaliphilum 20Z]
Length = 344
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 89/165 (53%), Gaps = 29/165 (17%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG AL V LH ++ V+ D+ F D ++ L ++RPTAVN+ A D +K
Sbjct: 63 YGVALSV--KLHCYDRSVNWSDQVFAD-----------IERLAASRPTAVNLFWALDRMK 109
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+ L+ + P + V +E + + DI+ N IG GA + G +K VLTH
Sbjct: 110 ALLN----SQPEDPVAATQALAVE-IHQDDIAANHRIGELGADII-----GGAK-GVLTH 158
Query: 246 CNTGSLATAEYGTALGVIRSL--HGANKIGAAYCTETRPYNQGAR 288
CN G+LAT YGTALGVIRS G NK+ + ETRP+ QGAR
Sbjct: 159 CNAGALATGGYGTALGVIRSACRRGLNKV---FAGETRPWLQGAR 200
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 59/232 (25%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++Q++ + SLK+LDQ LLP T D + + +AIK+M+VRGAPAI I G+ +
Sbjct: 8 AVQALQWTGDSLKVLDQRLLPETIAYEDYRDAQGVAEAIKTMRVRGAPAIGIAAAYGVAL 67
Query: 63 DIK-----------DKQFPDNELI------------------QLIESMLEKDISDNKAIG 93
+K D+ F D E + L+ S E ++ +A+
Sbjct: 68 SVKLHCYDRSVNWSDQVFADIERLAASRPTAVNLFWALDRMKALLNSQPEDPVAATQALA 127
Query: 94 RNGAQALIDLNPRVSKL---------NVLTHCNTGSLATAEYGTALGVIRSL--HGANKI 142
Q I N R+ +L VLTHCN G+LAT YGTALGVIRS G NK+
Sbjct: 128 VEIHQDDIAANHRIGELGADIIGGAKGVLTHCNAGALATGGYGTALGVIRSACRRGLNKV 187
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR---AADSVKSSLSEW 191
+ GE +L AR T + + AA + S + W
Sbjct: 188 ----------------FAGETRPWLQGARLTVWELAQDGIAATLIADSAAAW 223
>gi|167769757|ref|ZP_02441810.1| hypothetical protein ANACOL_01091 [Anaerotruncus colihominis DSM
17241]
gi|167668118|gb|EDS12248.1| S-methyl-5-thioribose-1-phosphate isomerase [Anaerotruncus
colihominis DSM 17241]
Length = 354
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 9/139 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D+ K EK YL S+RPTAVN+ A + ++ L E V +K RL Q +++
Sbjct: 75 DMDAFVKNFKEKKAYLDSSRPTAVNLSWALNRMEKVLEENRDKLTVAQMKERLCQEADAI 134
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG--VIRSLHGA 269
E+DI+ +++IG G + L+ G +LTHCN G+LATA+YGTAL I HG
Sbjct: 135 REEDIAISRSIGNLGFE-LLHHGDG-----ILTHCNAGTLATAKYGTALAPVYIALEHGW 188
Query: 270 NKIGAAYCTETRPYNQGAR 288
+ + +C ETRP QGAR
Sbjct: 189 DDL-HVFCDETRPLLQGAR 206
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 90/221 (40%), Gaps = 71/221 (32%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------- 62
K + ILDQ LLP K + ++ ED ++AI +++VRGAPAI + G+ +
Sbjct: 15 KKEMIILDQTLLPGEIKYLTLSKAEDIWEAIYALRVRGAPAIGVAAGYGIYIVASQLETD 74
Query: 63 --DIKDKQFPDNE---------------------------------------LIQLIESM 81
D K F + + L Q +++
Sbjct: 75 DMDAFVKNFKEKKAYLDSSRPTAVNLSWALNRMEKVLEENRDKLTVAQMKERLCQEADAI 134
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG--VIRSLHGA 139
E+DI+ +++IG G + L + +LTHCN G+LATA+YGTAL I HG
Sbjct: 135 REEDIAISRSIGNLGFELLHHGD------GILTHCNAGTLATAKYGTALAPVYIALEHGW 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
D L + E L AR +A M+ A
Sbjct: 189 --------------DDLHVFCDETRPLLQGARLSAFEMQTA 215
>gi|344199536|ref|YP_004783862.1| methylthioribose-1-phosphate isomerase [Acidithiobacillus
ferrivorans SS3]
gi|343774980|gb|AEM47536.1| Methylthioribose-1-phosphate isomerase [Acidithiobacillus
ferrivorans SS3]
Length = 350
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 9/124 (7%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + +ARPTAVN+ A D L+ AS L+Q +L DI+DN+ +GR
Sbjct: 85 DEIKAARPTAVNLAWATDR---QLALARSASTAEQAGAALLQAAHDLLRDDIADNQRMGR 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A K Y ETRP+
Sbjct: 142 YGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGVSAGKQLHVYVDETRPWL 195
Query: 285 QGAR 288
QGAR
Sbjct: 196 QGAR 199
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 63/220 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I +E+ L +LDQ LLP + +++ AI+ M VRGAPAI I + +
Sbjct: 7 IRAIRWEEGQLCLLDQRLLPQQETWLKLSDYRAVAVAIRQMVVRGAPAIGITAAYAMALA 66
Query: 64 IKDKQFPDNELIQLIES------------------------------------------- 80
+ + N L+ +
Sbjct: 67 VSEASTHANWQACLLSAADEIKAARPTAVNLAWATDRQLALARSASTAEQAGAALLQAAH 126
Query: 81 -MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+L DI+DN+ +GR GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A
Sbjct: 127 DLLRDDIADNQRMGRYGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGVSA 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K L YV E +L AR TA +++
Sbjct: 181 GK-------------QLHVYVDETRPWLQGARLTAWELQQ 207
>gi|261350335|ref|ZP_05975752.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanobrevibacter
smithii DSM 2374]
gi|288861119|gb|EFC93417.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanobrevibacter
smithii DSM 2374]
Length = 309
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 36/178 (20%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ +E + LK++DQ LP V N+ ++ AIK M VRGAPAI + G+
Sbjct: 1 MKTLE---WEDNKLKLIDQTKLPDELTYVYCNDYKEVIVAIKDMIVRGAPAIGVAAAFGM 57
Query: 61 VV-------------DIK-------------DKQFPDNELIQLIESMLEKDISDNKAIGR 94
+ +IK D+ ++ ++ +M ++DI N AIGR
Sbjct: 58 ALADLYGEDLDKAADEIKAARPTAINLFWAVDRVLNSDDPLEEALTMYKEDIDTNLAIGR 117
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANKIVDIKDKQFP 151
GA+ + D + VLTHCN G+LA +YGTALGVIRS H I I D+ P
Sbjct: 118 YGAEIIEDGD------TVLTHCNAGALACVDYGTALGVIRSAFHQGKNINVICDETRP 169
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 71/138 (51%), Gaps = 24/138 (17%)
Query: 155 SLEKYVGEKLD----YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+L GE LD + +ARPTA+N+ A D V +S P+ T
Sbjct: 58 ALADLYGEDLDKAADEIKAARPTAINLFWAVDRVLNS------DDPLEEALT-------- 103
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M ++DI N AIGR GA+ + D + VLTHCN G+LA +YGTALGVIRS
Sbjct: 104 MYKEDIDTNLAIGRYGAEIIEDGD------TVLTHCNAGALACVDYGTALGVIRSAFHQG 157
Query: 271 KIGAAYCTETRPYNQGAR 288
K C ETRP QGAR
Sbjct: 158 KNINVICDETRPRGQGAR 175
>gi|220905573|ref|YP_002480885.1| translation initiation factor, aIF-2BI family [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|254813644|sp|B8J4S7.1|MTNA_DESDA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|219869872|gb|ACL50207.1| translation initiation factor, aIF-2BI family [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 378
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKS-SLSEWAKASPVNTV 200
++ +++ Q PD + + ++ + +ARPTAVN++ A + ++ L+ +A +
Sbjct: 61 VLALREAQGPD---WAARLEQGMERIAAARPTAVNLRWAVERMRGVWLAAGGEAGDPAPL 117
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
T ++M ++D++ K +GR+GA + D + VLTHCN G+LATA YGTAL
Sbjct: 118 LTAFAHAAQTMQDEDVAVCKTLGRHGAACIEDGD------CVLTHCNAGALATAGYGTAL 171
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GVIR+ A K + ETRP+ QGAR
Sbjct: 172 GVIRAAVEAGKKVSVIADETRPFLQGAR 199
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 68/219 (31%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
++ L +LDQ LLP +VED A+++M VRGAPAI + G V+ +++ Q
Sbjct: 9 HQTFELHLLDQRLLPAQEADFVCRSVEDVVYALQTMVVRGAPAIGVTAAWGCVLALREAQ 68
Query: 69 FPD-----------------------------------------------NELIQLIESM 81
PD ++M
Sbjct: 69 GPDWAARLEQGMERIAAARPTAVNLRWAVERMRGVWLAAGGEAGDPAPLLTAFAHAAQTM 128
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGAN 140
++D++ K +GR+GA + D + VLTHCN G+LATA YGTALGVIR ++
Sbjct: 129 QDEDVAVCKTLGRHGAACIEDGD------CVLTHCNAGALATAGYGTALGVIRAAVEAGK 182
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K+ I D+ P +L AR TA ++R
Sbjct: 183 KVSVIADETRP--------------FLQGARLTAWELER 207
>gi|325295508|ref|YP_004282022.1| methylthioribose-1-phosphate isomerase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065956|gb|ADY73963.1| Methylthioribose-1-phosphate isomerase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 352
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 28/169 (16%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG A+G + + + +D K K + ++ L S RPTAVN+ A
Sbjct: 59 AAYGVAIGAKQVMKESKNFIDFKAK-----------IENVINRLASTRPTAVNLFWALKK 107
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGVSK 239
+K L T + ++ +E+ + ++D+ NK IG GA+ L SK
Sbjct: 108 MKKILE-------AGTNEKDIVAALETEAINIEKQDVETNKKIGYFGAELL------GSK 154
Query: 240 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCNTG+LATA YGTALGVIR+ + Y ETRPY QGAR
Sbjct: 155 EVILTHCNTGALATAGYGTALGVIRAAVETGRDILVYVDETRPYLQGAR 203
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 100/227 (44%), Gaps = 67/227 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ + + SL ++DQ LP + ++ + E +AI+ M VRGAPAI +V G+
Sbjct: 4 IKDIRPLKWTGESLLLIDQRKLPLKEEWIECKDYESVAKAIEDMVVRGAPAIGVVAAYGV 63
Query: 61 VVDIKD-----KQFPD---------NEL-------------IQLIESMLE---------- 83
+ K K F D N L ++ ++ +LE
Sbjct: 64 AIGAKQVMKESKNFIDFKAKIENVINRLASTRPTAVNLFWALKKMKKILEAGTNEKDIVA 123
Query: 84 -----------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+D+ NK IG GA+ L SK +LTHCNTG+LATA YGTALGV
Sbjct: 124 ALETEAINIEKQDVETNKKIGYFGAELL------GSKEVILTHCNTGALATAGYGTALGV 177
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
IR+ + + + YV E YL AR TA +++
Sbjct: 178 IRAAVETGRDILV-------------YVDETRPYLQGARLTAWELQQ 211
>gi|239617828|ref|YP_002941150.1| translation initiation factor, aIF-2BI family [Kosmotoga olearia
TBF 19.5.1]
gi|239506659|gb|ACR80146.1| translation initiation factor, aIF-2BI family [Kosmotoga olearia
TBF 19.5.1]
Length = 347
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 89/171 (52%), Gaps = 29/171 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A+A +G LG + +GA F + L Y+ + + L S+RPTAVN+ A
Sbjct: 56 ASAAFGYVLGA-QKFNGA----------FDSAEGL-AYMEKVKEKLASSRPTAVNLFWAL 103
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGV 237
D + + + V ++L+E + +DI N+AIG++GA+ L D +
Sbjct: 104 DRMHRTFESFRNEPDV-------VKLLEEEALKIAYEDIEVNRAIGKHGAEVLRDGD--- 153
Query: 238 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT +YGTALGVIR+ K + ETRPY QGAR
Sbjct: 154 ---TVLTHCNAGALATVDYGTALGVIRAAVEQGKKIKVFADETRPYLQGAR 201
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 93/228 (40%), Gaps = 68/228 (29%)
Query: 1 MKSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M L+++ E S+ +DQ LP V+ ED Y AIK M VRGAPAI
Sbjct: 1 MSKLKTMTLEWTGESVIFIDQRKLPTQEIYVECETYEDVYVAIKDMIVRGAPAIGASAAF 60
Query: 59 GLVVDIK--DKQFPDNELIQLIESMLEK-------------------------------- 84
G V+ + + F E + +E + EK
Sbjct: 61 GYVLGAQKFNGAFDSAEGLAYMEKVKEKLASSRPTAVNLFWALDRMHRTFESFRNEPDVV 120
Query: 85 -------------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
DI N+AIG++GA+ L D + VLTHCN G+LAT +YGTALG
Sbjct: 121 KLLEEEALKIAYEDIEVNRAIGKHGAEVLRDGD------TVLTHCNAGALATVDYGTALG 174
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
VIR+ K K K F D E YL AR TA + +
Sbjct: 175 VIRAAVEQGK----KIKVFAD---------ETRPYLQGARLTAWELMK 209
>gi|148642864|ref|YP_001273377.1| translation initiation factor aIF-2B, alpha subunit
[Methanobrevibacter smithii ATCC 35061]
gi|222445097|ref|ZP_03607612.1| hypothetical protein METSMIALI_00716 [Methanobrevibacter smithii
DSM 2375]
gi|148551881|gb|ABQ87009.1| translation initiation factor aIF-2B, alpha subunit
[Methanobrevibacter smithii ATCC 35061]
gi|222434662|gb|EEE41827.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanobrevibacter
smithii DSM 2375]
Length = 309
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 36/178 (20%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ +E + LK++DQ LP V N+ ++ AIK M VRGAPAI + G+
Sbjct: 1 MKTLE---WEDNKLKLIDQTKLPDELTYVYCNDYKEVIVAIKDMIVRGAPAIGVAAAFGM 57
Query: 61 VV-------------DIK-------------DKQFPDNELIQLIESMLEKDISDNKAIGR 94
+ +IK D+ ++ ++ +M ++DI N AIGR
Sbjct: 58 ALADLHGEDLDNAADEIKAARPTAINLFWAVDRVLNSDDPLEEALTMYKEDIDTNLAIGR 117
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANKIVDIKDKQFP 151
GA+ + D + VLTHCN G+LA +YGTALGVIRS H I I D+ P
Sbjct: 118 YGAEIIEDGD------TVLTHCNAGALACVDYGTALGVIRSAFHQGKNINVICDETRP 169
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 66/124 (53%), Gaps = 20/124 (16%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + +ARPTA+N+ A D V +S P+ T M ++DI N AIGR
Sbjct: 72 DEIKAARPTAINLFWAVDRVLNS------DDPLEEALT--------MYKEDIDTNLAIGR 117
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ + D + VLTHCN G+LA +YGTALGVIRS K C ETRP
Sbjct: 118 YGAEIIEDGD------TVLTHCNAGALACVDYGTALGVIRSAFHQGKNINVICDETRPRG 171
Query: 285 QGAR 288
QGAR
Sbjct: 172 QGAR 175
>gi|384083344|ref|ZP_09994519.1| putative translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase [gamma
proteobacterium HIMB30]
Length = 349
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+K+ L ++RPTAVN+ A D + ++L + ++SPV V ++ +++ +D+S N+
Sbjct: 78 QKIATLRASRPTAVNLMWAIDRM-TALIDQLRSSPVRVVIDAFLEEAKAIELEDVSINQR 136
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IG +G+ D + +LT+CN G+LATA YGTALGVIRS + + Y ETR
Sbjct: 137 IGDHGSSLCRD------DMRILTYCNAGALATAGYGTALGVIRSASRDFENISVYACETR 190
Query: 282 PYNQGAR 288
PY QGAR
Sbjct: 191 PYLQGAR 197
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 66/223 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + +L +LDQ LP+ V + E+ I+ M VRGAPAI + G+
Sbjct: 2 VETMYWADDALYLLDQRALPNEVTYVKCGSAEEISAGIQDMVVRGAPAIGVAAAYGVTRA 61
Query: 64 IKDK----------------------------------------QFPDNELIQLIESMLE 83
++D Q + + +I++ LE
Sbjct: 62 VQDSCSDLAVDWELVLQKIATLRASRPTAVNLMWAIDRMTALIDQLRSSPVRVVIDAFLE 121
Query: 84 K-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ D+S N+ IG +G+ D + +LT+CN G+LATA YGTALGVIRS
Sbjct: 122 EAKAIELEDVSINQRIGDHGSSLCRD------DMRILTYCNAGALATAGYGTALGVIRS- 174
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A++ D +++ Y E YL AR TA + +
Sbjct: 175 --ASR----------DFENISVYACETRPYLQGARLTAWELMQ 205
>gi|344339503|ref|ZP_08770432.1| Methylthioribose-1-phosphate isomerase [Thiocapsa marina 5811]
gi|343800807|gb|EGV18752.1| Methylthioribose-1-phosphate isomerase [Thiocapsa marina 5811]
Length = 355
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 75/125 (60%), Gaps = 10/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L ++RPTAVN+ A D ++ ++ + P L+ ++ +D + N+ IG
Sbjct: 91 LARLAASRPTAVNLFWAIDRMRRLIARLDERDPFPA----LVDEALAIHAEDRAANRVIG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI+ ++ +++THCN G++AT YGTALGVIRS + A K+G + ETRP+
Sbjct: 147 DLGA-ALIE-----ARTDIITHCNAGAIATGGYGTALGVIRSAYAAGKVGRVFADETRPW 200
Query: 284 NQGAR 288
QGAR
Sbjct: 201 MQGAR 205
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 51/180 (28%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK-- 65
++ + L + DQ LLP ++ + + + +I++M VRGAPAI + G+ + +
Sbjct: 16 LWHEGVLYLADQRLLPDRAEFLRLTDAGAVADSIRAMVVRGAPAIGVAAAYGVALAGRDA 75
Query: 66 -------------------------------------------DKQFPDNELIQLIESML 82
D++ P L+ ++
Sbjct: 76 YAAAGGGWKAAIESDLARLAASRPTAVNLFWAIDRMRRLIARLDERDPFPALVDEALAIH 135
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D + N+ IG GA ALI+ ++ +++THCN G++AT YGTALGVIRS + A K+
Sbjct: 136 AEDRAANRVIGDLGA-ALIE-----ARTDIITHCNAGAIATGGYGTALGVIRSAYAAGKV 189
>gi|365845579|ref|ZP_09386344.1| S-methyl-5-thioribose-1-phosphate isomerase [Flavonifractor plautii
ATCC 29863]
gi|364559973|gb|EHM37933.1| S-methyl-5-thioribose-1-phosphate isomerase [Flavonifractor plautii
ATCC 29863]
Length = 334
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 161 GEKLD----YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
GE LD L ++RPTAVN+ A + ++ E A+ LI +++ +D+
Sbjct: 69 GEGLDEAKETLAASRPTAVNLFWALERMERKAKECGGAA------EPLIAEAKAIHAEDV 122
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ +A+G +GA + + +LTHCN G+LAT YGTALGVIR+ H A K+ Y
Sbjct: 123 AMCRAMGAHGAAVVPE------HARILTHCNAGALATGGYGTALGVIRAAHEAGKVNMVY 176
Query: 277 CTETRPYNQGAR 288
C ETRP QGAR
Sbjct: 177 CDETRPLLQGAR 188
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I +E ++L +LDQ LP T + + AI++M VRGAPAI + +
Sbjct: 6 MDAIRWEGNTLYLLDQTKLPVTEVWLPYTDYRPVADAIRTMVVRGAPAIGVAAAYAYCLA 65
Query: 64 IKDKQFPDN-------------ELIQLIESMLEK---------------------DISDN 89
+ D L +E M K D++
Sbjct: 66 ALAGEGLDEAKETLAASRPTAVNLFWALERMERKAKECGGAAEPLIAEAKAIHAEDVAMC 125
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+A+G +GA A++ + R+ LTHCN G+LAT YGTALGVIR+ H A K+
Sbjct: 126 RAMGAHGA-AVVPEHARI-----LTHCNAGALATGGYGTALGVIRAAHEAGKV 172
>gi|220909184|ref|YP_002484495.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. PCC 7425]
gi|219865795|gb|ACL46134.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
7425]
Length = 350
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 87/166 (52%), Gaps = 20/166 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA-AD 182
A YG LG S GA + ++ D D VGEKL S RPTAVN+ A A
Sbjct: 58 AAYGMYLGARES--GATE----REAFLADLDR----VGEKLG---STRPTAVNLFWAIAR 104
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+K++ + V +K L++ + +DI +AIG G L+ L KL +
Sbjct: 105 MLKTARQSFGD---VEQIKATLLETAHQIKTEDIQTCEAIGAAG---LLALPQSPEKLRI 158
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN G+LATA YGTALGVIRS +++ Y ETRP QGA+
Sbjct: 159 LTHCNAGALATAGYGTALGVIRSAWANHRLERVYADETRPRLQGAK 204
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 44/185 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+S+ +++ + ++++DQ LP +V+I ED +AI++M VRGAPAI + G+
Sbjct: 4 QSIYPVVWFDNHVRLIDQTRLPAEYSVVEIYRCEDMAEAIRTMIVRGAPAIGVAAAYGMY 63
Query: 62 VDIKD------------------------------------------KQFPDNELIQ--L 77
+ ++ + F D E I+ L
Sbjct: 64 LGARESGATEREAFLADLDRVGEKLGSTRPTAVNLFWAIARMLKTARQSFGDVEQIKATL 123
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+E+ + D + GA L+ L KL +LTHCN G+LATA YGTALGVIRS
Sbjct: 124 LETAHQIKTEDIQTCEAIGAAGLLALPQSPEKLRILTHCNAGALATAGYGTALGVIRSAW 183
Query: 138 GANKI 142
+++
Sbjct: 184 ANHRL 188
>gi|307353081|ref|YP_003894132.1| aIF-2BI family translation initiation factor [Methanoplanus
petrolearius DSM 11571]
gi|307156314|gb|ADN35694.1| translation initiation factor, aIF-2BI family [Methanoplanus
petrolearius DSM 11571]
Length = 346
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 76/139 (54%), Gaps = 17/139 (12%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMK----RAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
DS + V E DYL S RPTAVN+ R +S+K++ ASP +T L ++ E
Sbjct: 74 DSFLRLVREDADYLNSTRPTAVNLSWGINRTYESIKNA------ASPEEAAETAL-RVAE 126
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+ +D + IG GA+ L D + VLTHCN G+LA +GTALGVIRS A
Sbjct: 127 EIAAEDEMMCRKIGETGAKFLPD------ECTVLTHCNAGALACYTWGTALGVIRSAVEA 180
Query: 270 NKIGAAYCTETRPYNQGAR 288
K + ETRP NQG+R
Sbjct: 181 GKNVSVISCETRPLNQGSR 199
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 55/190 (28%)
Query: 5 QSIIYEKH---SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +Y H S+ ++Q LP + V +VE +AI+ ++VRGAPA+ + G G+
Sbjct: 3 EKTVYWDHDSGSIIFIEQTALPAEYRTVSCKSVERLAEAIRRLEVRGAPALGVAGAFGVA 62
Query: 62 V-------------------------------------------DIKDKQFPDN---ELI 75
+ IK+ P+ +
Sbjct: 63 LAAKLHDDSNMDSFLRLVREDADYLNSTRPTAVNLSWGINRTYESIKNAASPEEAAETAL 122
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ E + +D + IG GA+ L D + VLTHCN G+LA +GTALGVIRS
Sbjct: 123 RVAEEIAAEDEMMCRKIGETGAKFLPD------ECTVLTHCNAGALACYTWGTALGVIRS 176
Query: 136 LHGANKIVDI 145
A K V +
Sbjct: 177 AVEAGKNVSV 186
>gi|119492677|ref|ZP_01623856.1| translation initiation factor IF-2B subunit alpha [Lyngbya sp. PCC
8106]
gi|119453015|gb|EAW34186.1| translation initiation factor IF-2B subunit alpha [Lyngbya sp. PCC
8106]
Length = 348
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 74/143 (51%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D + D L RPTAVN+ A D + + E V V+ L+
Sbjct: 69 RDIQSVDRQEFFTQLETVADVLRRTRPTAVNLFWAIDQMLKTAEE--TNGSVEQVQQALL 126
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ +++ +DI K IG NG L +P KLNVLTHCN G+LAT YGTALGVIRS
Sbjct: 127 EKAKTIHAEDIQTCKLIGDNGLSVL-PTSP--QKLNVLTHCNAGALATGGYGTALGVIRS 183
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 184 AWREGRLERVYADETRPRLQGAK 206
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 83/182 (45%), Gaps = 50/182 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+ + II++ + ++DQ LP ++I+ ED AIK+M VRGAPAI I G+
Sbjct: 5 LTQVYPIIWQDDHVLLIDQTRLPKEYTQIEISRYEDMAHAIKTMIVRGAPAIGIAAAYGI 64
Query: 61 VVDIKDKQFPDNELI----------------------------------------QLIES 80
+ +D Q D + Q+ ++
Sbjct: 65 YLGARDIQSVDRQEFFTQLETVADVLRRTRPTAVNLFWAIDQMLKTAEETNGSVEQVQQA 124
Query: 81 MLEK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+LEK DI K IG NG L +P+ KLNVLTHCN G+LAT YGTALGVI
Sbjct: 125 LLEKAKTIHAEDIQTCKLIGDNGLSVL-PTSPQ--KLNVLTHCNAGALATGGYGTALGVI 181
Query: 134 RS 135
RS
Sbjct: 182 RS 183
>gi|381151398|ref|ZP_09863267.1| S-methyl-5-thioribose-1-phosphate isomerase [Methylomicrobium album
BG8]
gi|380883370|gb|EIC29247.1| S-methyl-5-thioribose-1-phosphate isomerase [Methylomicrobium album
BG8]
Length = 346
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 82/163 (50%), Gaps = 25/163 (15%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG L V R H D + K D D L K +RPTAVN+ A D +K
Sbjct: 63 YGVVLSVRR--HAGENAADWRAKVDADIDGLAK-----------SRPTAVNLFWALDRMK 109
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+L A P +T ++ E + DI+ N+A+G GA + G +K VLTH
Sbjct: 110 KTLD----AHP-DTPLAAVLAEAEKIHADDIAANRAMGERGADLI-----GSAK-GVLTH 158
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CN G+LAT YGTAL VIRSL+ + Y ETRP+ QGAR
Sbjct: 159 CNAGALATGGYGTALSVIRSLYSRRPV-QVYAGETRPWLQGAR 200
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 101/230 (43%), Gaps = 66/230 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S++++ + ++L+ILDQ +P D + E+ +AI SM+VRGAPAI I G+V+
Sbjct: 8 SVEALKWTGNALQILDQRKVPERIVYQDFDTAEEVSRAIASMRVRGAPAIGIAAAYGVVL 67
Query: 63 DIK-----------------------------------DKQ------FPDNELIQLI--- 78
++ D+ PD L ++
Sbjct: 68 SVRRHAGENAADWRAKVDADIDGLAKSRPTAVNLFWALDRMKKTLDAHPDTPLAAVLAEA 127
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E + DI+ N+A+G GA LI S VLTHCN G+LAT YGTAL VIRSL+
Sbjct: 128 EKIHADDIAANRAMGERGAD-LIG-----SAKGVLTHCNAGALATGGYGTALSVIRSLYS 181
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ + Y GE +L AR T + + D + ++L
Sbjct: 182 RRPV--------------QVYAGETRPWLQGARLTVWELSQ--DGIPATL 215
>gi|288931704|ref|YP_003435764.1| translation initiation factor, aIF-2BI family [Ferroglobus placidus
DSM 10642]
gi|288893952|gb|ADC65489.1| translation initiation factor, aIF-2BI family [Ferroglobus placidus
DSM 10642]
Length = 343
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
++ F D +++++ + + L S RPTAVN+ ++ +L+ K V ++ ++
Sbjct: 62 ERDFSSVDEMKEHLKKSAELLASTRPTAVNL---FVGIERALNAALKGESVEEIRKLALK 118
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL 266
E + E+D+ NK +GR GA+ + D + +LT CNTG LAT ++GTALGVIRS
Sbjct: 119 EAEKIAEEDVERNKLMGRFGAKLIEDGD------TILTICNTGRLATVDWGTALGVIRSA 172
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
K ETRP NQG+R
Sbjct: 173 VEEGKRVKVIACETRPLNQGSR 194
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 52/174 (29%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDK 67
I+ + +K++DQ LP ++++ VE+ +AIK + VRGAPA+ G G+ + ++
Sbjct: 4 IFWDNCVKLIDQTKLPEKFEILECKRVEELAEAIKKLAVRGAPALEAAGAYGIALAAHER 63
Query: 68 QFPD--------------------------------------NELIQLI--------ESM 81
F E ++ I E +
Sbjct: 64 DFSSVDEMKEHLKKSAELLASTRPTAVNLFVGIERALNAALKGESVEEIRKLALKEAEKI 123
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+D+ NK +GR GA+ + D + +LT CNTG LAT ++GTALGVIRS
Sbjct: 124 AEEDVERNKLMGRFGAKLIEDGD------TILTICNTGRLATVDWGTALGVIRS 171
>gi|392394732|ref|YP_006431334.1| methylthioribose-1-phosphate isomerase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525810|gb|AFM01541.1| methylthioribose-1-phosphate isomerase [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 345
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ + L+ ++ + L RPTAVN+ A ++ L + ++ ++ L+ ES+
Sbjct: 67 EPEGLQSHMEKVQHRLAGTRPTAVNLFWALRRMEDRLRDQHGVKELSEIRKALVGEAESI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D N+ IG +G + ++ ++LTHCN G+LAT EYGTALGVIR+ A K
Sbjct: 127 AEDDRRVNRLIGEHGNTIV------TAEASILTHCNAGALATVEYGTALGVIRAAQQAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
Y ETRP+ QGAR
Sbjct: 181 KVHVYAGETRPFLQGAR 197
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 89/225 (39%), Gaps = 70/225 (31%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR------------- 47
MK+L+ + SLKILDQ LP E+ +AI+ M+VR
Sbjct: 1 MKALE---WMGDSLKILDQTRLPVEVNYRMATTYEEVAEAIEKMEVRGAPAIGAAAAYGY 57
Query: 48 --------GAP--------------------AIAIVGCLGLVVDIKDKQFPDNELIQL-- 77
G P A+ + L + D Q EL ++
Sbjct: 58 ALGAMGYSGEPEGLQSHMEKVQHRLAGTRPTAVNLFWALRRMEDRLRDQHGVKELSEIRK 117
Query: 78 -----IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
ES+ E D N+ IG +G + ++ ++LTHCN G+LAT EYGTALGV
Sbjct: 118 ALVGEAESIAEDDRRVNRLIGEHGNTIV------TAEASILTHCNAGALATVEYGTALGV 171
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IR+ A K V + Y GE +L AR TA +
Sbjct: 172 IRAAQQAGKKVHV-------------YAGETRPFLQGARLTAFEL 203
>gi|373115453|ref|ZP_09529626.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371670396|gb|EHO35478.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 329
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 74/132 (56%), Gaps = 16/132 (12%)
Query: 161 GEKLD----YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
GE LD L ++RPTAVN+ A + ++ E A+ LI +++ +D+
Sbjct: 64 GEGLDEAKETLAASRPTAVNLFWALERMERKAKECGGAA------EPLIAEAKAIHAEDV 117
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ +A+G +GA + + +LTHCN G+LAT YGTALGVIR+ H A K+ Y
Sbjct: 118 AMCRAMGAHGAAVVPE------HARILTHCNAGALATGGYGTALGVIRAAHEAGKVNMVY 171
Query: 277 CTETRPYNQGAR 288
C ETRP QGAR
Sbjct: 172 CDETRPLLQGAR 183
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I +E ++L +LDQ LP T + + AI++M VRGAPAI + +
Sbjct: 1 MDAIRWEGNTLYLLDQTKLPVTEVWLPYTDYRPVADAIRTMVVRGAPAIGVAAAYAYCLA 60
Query: 64 IKDKQFPDN-------------ELIQLIESMLEK---------------------DISDN 89
+ D L +E M K D++
Sbjct: 61 ALAGEGLDEAKETLAASRPTAVNLFWALERMERKAKECGGAAEPLIAEAKAIHAEDVAMC 120
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+A+G +GA A++ + R+ LTHCN G+LAT YGTALGVIR+ H A K+
Sbjct: 121 RAMGAHGA-AVVPEHARI-----LTHCNAGALATGGYGTALGVIRAAHEAGKV 167
>gi|389807670|ref|ZP_10204207.1| methylthioribose-1-phosphate isomerase [Rhodanobacter thiooxydans
LCS2]
gi|388443795|gb|EIL99930.1| methylthioribose-1-phosphate isomerase [Rhodanobacter thiooxydans
LCS2]
Length = 339
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A D +K A R Q I+ ++D++ N+ +G
Sbjct: 81 LATLRAARPTAVNLMWALDRMKRR----LAAGADADALLREAQAIQ---DEDLAANRRMG 133
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA LI PG VLTHCNTGSLATA YGTALGVIR+ A +I Y ETRP+
Sbjct: 134 ELGA-GLI--APGS---GVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARVYAGETRPW 187
Query: 284 NQGAR 288
QGAR
Sbjct: 188 QQGAR 192
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 54/219 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA------------- 49
S++++ ++ L++LDQ LLP + VD + +AI+ + VRGA
Sbjct: 10 SIRAVQWQGGHLRLLDQRLLPGEERWVDCRDAAQVTEAIRDLAVRGAPAIGIAAAWGVAM 69
Query: 50 ---------PAIAIVGC-------LGLVVDIKDKQFPDNELIQLI----ESMLEKDISDN 89
P +A + L +D ++ + +++ ++D++ N
Sbjct: 70 AAQQGMALEPVLATLRAARPTAVNLMWALDRMKRRLAAGADADALLREAQAIQDEDLAAN 129
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
+ +G GA LI VLTHCNTGSLATA YGTALGVIR+ A +I +
Sbjct: 130 RRMGELGA-GLI-----APGSGVLTHCNTGSLATAGYGTALGVIRAGVAAGRIARV---- 179
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
Y GE + AR T + R D + + L
Sbjct: 180 ---------YAGETRPWQQGARLTMWELVR--DGIPAQL 207
>gi|220932684|ref|YP_002509592.1| putative translation initiation factor, aIF-2BI family
[Halothermothrix orenii H 168]
gi|219993994|gb|ACL70597.1| putative translation initiation factor, aIF-2BI family
[Halothermothrix orenii H 168]
Length = 355
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 149 QFPDN--DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
+F +N + K V E LV ARPTAVN+ A + ++ ++ + PV+ + L +
Sbjct: 64 EFKNNSEEVFFKKVKEANKVLVKARPTAVNLFWAINRMEQAMKR-NRNKPVSEILEILRE 122
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL 266
+++ +D+ N+AIG+ G + + +LTHCN G+LAT YGTALGVIR+
Sbjct: 123 EADNIAREDVETNQAIGKFGNEVI------PQGATILTHCNAGALATVGYGTALGVIRAA 176
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
H + K Y ETRP QGAR
Sbjct: 177 HESGKNIKVYADETRPRLQGAR 198
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 30/135 (22%)
Query: 65 KDKQFPDNELIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGS 120
+++ P +E+++++ +++ +D+ N+AIG+ G + + P+ + +LTHCN G+
Sbjct: 107 RNRNKPVSEILEILREEADNIAREDVETNQAIGKFGNEVI----PQGA--TILTHCNAGA 160
Query: 121 LATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
LAT YGTALGVIR+ H + K +++ Y E L AR TA +
Sbjct: 161 LATVGYGTALGVIRAAHESGK-------------NIKVYADETRPRLQGARLTAFELVEE 207
Query: 181 -------ADSVKSSL 188
ADSV ++L
Sbjct: 208 GIPVTLIADSVAATL 222
>gi|251770988|gb|EES51572.1| translation initiation factor, aIF-2BI/5-methylthioribose-1-
phosphate isomerase [Leptospirillum ferrodiazotrophum]
Length = 358
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 86/168 (51%), Gaps = 23/168 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A +G ALG L + D S Y+ E + RPTAVN+ A +
Sbjct: 58 SAAFGIALGAQEDLAPS------------DGLSFSSYMEEVALTIGQTRPTAVNLFWAIE 105
Query: 183 SVKSSLSEWAK-ASPVNTVKTR-LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKL 240
++ W K AS + +TR L +++ + DI N+ IG +G QAL+ SK
Sbjct: 106 RMRPV---WQKIASHPSRERTRILFAEAQAIKDDDIQRNRKIGTHG-QALLP-----SKA 156
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT YGTALGVIR A K + + ETRPY QGAR
Sbjct: 157 TVLTHCNAGALATGGYGTALGVIRGAVEAGKSVSVFADETRPYLQGAR 204
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 89/225 (39%), Gaps = 70/225 (31%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
++ ++DQ LP V ++ AI+ M VRGAPAI I G+ + ++ P +
Sbjct: 16 TVHLIDQRELPTREIDVPCRTHKEMADAIREMVVRGAPAIGISAAFGIALGAQEDLAPSD 75
Query: 73 -----------------------ELIQLIESML--------------------------E 83
L IE M +
Sbjct: 76 GLSFSSYMEEVALTIGQTRPTAVNLFWAIERMRPVWQKIASHPSRERTRILFAEAQAIKD 135
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
DI N+ IG +G QAL+ SK VLTHCN G+LAT YGTALGVIR A K V
Sbjct: 136 DDIQRNRKIGTHG-QALLP-----SKATVLTHCNAGALATGGYGTALGVIRGAVEAGKSV 189
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ + E YL AR TA + AAD + ++L
Sbjct: 190 SV-------------FADETRPYLQGARLTAYEL--AADGIPTTL 219
>gi|290968531|ref|ZP_06560070.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera genomosp.
type_1 str. 28L]
gi|290781527|gb|EFD94116.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera genomosp.
type_1 str. 28L]
Length = 353
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
VG++L+ ARPTAVN+ A + S+++ A PV+ + + + +D+ N
Sbjct: 83 VGKQLE---QARPTAVNLHWAIARL-VSMADTLSAQPVSCIVAAIETEACRIQAEDLEIN 138
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+A+ R GA+ L+ + L +LTHCN G+LATA GTALGVIR+LH ++ Y E
Sbjct: 139 RAMSRFGAEELLKQD---KPLTILTHCNAGALATAGIGTALGVIRALHAKGRLLRVYADE 195
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 196 TRPLLQGAR 204
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 55/194 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++ ++K SL++LDQ +LP ++ AI + VRGAPAI + G+V+
Sbjct: 1 MDTLYWQKGSLQVLDQTVLPEKEVYRTCTAWQEVRDAIAVLAVRGAPAIGVAAAYGMVLA 60
Query: 64 IK---------------------DKQF---------------------------PDNELI 75
K KQ P + ++
Sbjct: 61 GKALVRERPSLTAAEFLQAFHAVGKQLEQARPTAVNLHWAIARLVSMADTLSAQPVSCIV 120
Query: 76 QLIES----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+ + +D+ N+A+ R GA+ L+ + L +LTHCN G+LATA GTALG
Sbjct: 121 AAIETEACRIQAEDLEINRAMSRFGAEELLKQD---KPLTILTHCNAGALATAGIGTALG 177
Query: 132 VIRSLHGANKIVDI 145
VIR+LH +++ +
Sbjct: 178 VIRALHAKGRLLRV 191
>gi|289548230|ref|YP_003473218.1| translation initiation factor, aIF-2BI family [Thermocrinis albus
DSM 14484]
gi|289181847|gb|ADC89091.1| translation initiation factor, aIF-2BI family [Thermocrinis albus
DSM 14484]
Length = 318
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 51/205 (24%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++ ++K L +LDQ +LPH + + + + QAIK M VRGAPAI V G V+
Sbjct: 3 VKAFFWKKTHLLLLDQRVLPHKEEWLVLEDHRQVAQAIKDMAVRGAPAIGCVAAYGFVLG 62
Query: 64 IKDKQFPDNELIQLIESM-------------------------------LEKDISDNKAI 92
+K K +P E+ +++ E+D N+ +
Sbjct: 63 VK-KGYPPEEVYNTLKNTRPTAYNLFYALDRVTRALKEGADPEEEAVKIEEEDYKANRQM 121
Query: 93 GRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPD 152
G G DL P ++ VLT CNTG+LATA +GTALGVIRS H A K V +
Sbjct: 122 GEIGK----DLVPDNAR--VLTICNTGALATAGWGTALGVIRSAHRAGKKVFV------- 168
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNM 177
+V E +L AR TA +
Sbjct: 169 ------WVCETRPFLQGARLTAWEL 187
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E + L + RPTA N+ A D V +L E A P + E+D N+
Sbjct: 71 EVYNTLKNTRPTAYNLFYALDRVTRALKE--GADPEEEAV--------KIEEEDYKANRQ 120
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+G G DL P ++ VLT CNTG+LATA +GTALGVIRS H A K + ETR
Sbjct: 121 MGEIGK----DLVPDNAR--VLTICNTGALATAGWGTALGVIRSAHRAGKKVFVWVCETR 174
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 175 PFLQGAR 181
>gi|393795948|ref|ZP_10379312.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 353
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+K D + + + + +K +I + M E+DI NK++G+NG
Sbjct: 94 LFETRPTAVNLKWGLDKI---MKVARSGNTIEQIKQSVINESKKMAEEDIEINKSMGKNG 150
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D N ++THCN G+LAT YGTALGVIR+ + K TETRP QG
Sbjct: 151 S-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRATRESGKNVKVIATETRPIQQG 204
Query: 287 AR 288
+R
Sbjct: 205 SR 206
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+++ ++ + + ++DQ LP+ V ++ AI+++ VRGAPAI + G GL +
Sbjct: 11 SLRTVEWKDNKVIMIDQTKLPNQLVFVTYDDFNQVADAIRTLIVRGAPAIGVSGAFGLAL 70
Query: 63 -DIKDKQFPDNELIQLIES----------------------------------------- 80
++ K EL+ +E
Sbjct: 71 ASLQSKSTTKEELLSDLEKARKILFETRPTAVNLKWGLDKIMKVARSGNTIEQIKQSVIN 130
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
M E+DI NK++G+NG+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 131 ESKKMAEEDIEINKSMGKNGS-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRAT 184
Query: 137 HGANKIVDI 145
+ K V +
Sbjct: 185 RESGKNVKV 193
>gi|335049755|ref|ZP_08542741.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera sp. UPII
199-6]
gi|333762250|gb|EGL39754.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera sp. UPII
199-6]
Length = 353
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
VG++L+ ARPTAVN+ A + S+++ A PV+ + + + +D+ N
Sbjct: 83 VGKQLE---QARPTAVNLHWAIARL-VSMADTLSAQPVSCIVAAIETEACRIQAEDLEIN 138
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+A+ R GA+ L+ + L +LTHCN G+LATA GTALGVIR+LH ++ Y E
Sbjct: 139 RAMSRFGAEELLKQD---KPLTILTHCNAGALATAGIGTALGVIRALHAKGRLLRVYADE 195
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 196 TRPLLQGAR 204
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 55/194 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++ ++K SL++LDQ +LP ++ AI + VRGAPAI + G+V+
Sbjct: 1 MDTLYWQKGSLQVLDQTVLPEKEVYRTCTAWQEVRDAIAVLAVRGAPAIGVAAAYGMVLA 60
Query: 64 IK---------------------DKQF---------------------------PDNELI 75
K KQ P + ++
Sbjct: 61 GKALVRERPSLTAAEFLQAFHAVGKQLEQARPTAVNLHWAIARLVSMADTLSAQPVSCIV 120
Query: 76 QLIES----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
IE+ + +D+ N+A+ R GA+ L+ + L +LTHCN G+LATA GTALG
Sbjct: 121 AAIETEACRIQAEDLEINRAMSRFGAEELLKQD---KPLTILTHCNAGALATAGIGTALG 177
Query: 132 VIRSLHGANKIVDI 145
VIR+LH +++ +
Sbjct: 178 VIRALHAKGRLLRV 191
>gi|88810642|ref|ZP_01125899.1| Initiation factor 2B alpha/beta/delta [Nitrococcus mobilis Nb-231]
gi|88792272|gb|EAR23382.1| Initiation factor 2B alpha/beta/delta [Nitrococcus mobilis Nb-231]
Length = 336
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 13/126 (10%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
+L YL ARPTA N+ A +++ L+ A A + R+ +D+ N +
Sbjct: 78 ELQYLAQARPTAANLHWALQRMRAKLANGADAETMAAEACRV-------HAEDVRANHYM 130
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
G+ G + K VLTHCNTGSLAT YGTALGVIR+ + A ++ Y ETRP
Sbjct: 131 GQLG------MGYFTVKGAVLTHCNTGSLATGGYGTALGVIRAAYAAGRVSCVYVDETRP 184
Query: 283 YNQGAR 288
+ QGAR
Sbjct: 185 WLQGAR 190
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 43/213 (20%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++++ + +L +LDQ LPH + + + D AI++M VRGAPAI I G +
Sbjct: 5 TVRALHWTGETLVLLDQRRLPHEIQYKECASAADVADAIQTMIVRGAPAIGIAAAYGAAL 64
Query: 63 DIKDKQFP---DNELIQLIESM-----LEKDISDNKAIGRNGAQAL-------------I 101
++ P + EL L ++ L + +A NGA A +
Sbjct: 65 AVRQHADPAKREAELQYLAQARPTAANLHWALQRMRAKLANGADAETMAAEACRVHAEDV 124
Query: 102 DLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPD 152
N + +L VLTHCNTGSLAT YGTALGVIR+ + A ++ +
Sbjct: 125 RANHYMGQLGMGYFTVKGAVLTHCNTGSLATGGYGTALGVIRAAYAAGRVSCV------- 177
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YV E +L AR TA +++ V+
Sbjct: 178 ------YVDETRPWLQGARLTAWELQQEGIPVR 204
>gi|319787329|ref|YP_004146804.1| translation initiation factor, aIF-2BI family [Pseudoxanthomonas
suwonensis 11-1]
gi|317465841|gb|ADV27573.1| translation initiation factor, aIF-2BI family [Pseudoxanthomonas
suwonensis 11-1]
Length = 352
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A ++ +L+ + V TR Q I ++D++ N+ +G
Sbjct: 92 LQRLNAARPTAVNLAWALARMRRALA--TAGADWREVATREAQAIA---DEDLAANRRMG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA AL+ PG VLTHCNTGSLATA +GTALGVIR+ +I Y ETRP+
Sbjct: 147 ALGA-ALV--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAEGRIAKVYAGETRPW 200
Query: 284 NQGAR 288
QGAR
Sbjct: 201 LQGAR 205
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 109/243 (44%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V + ++ QAI+ + VRGAPAI I G+V+
Sbjct: 13 IRPILWTGEALELLDQRKLPFVVEHVTCRDSDEVAQAIRDLAVRGAPAIGIAAAWGVVLA 72
Query: 64 IKDKQFPDN--ELIQL-----------------------IESMLEKDISDNKAIGRNGAQ 98
+ D L++L + L +D + + AQ
Sbjct: 73 SGTVEADDGTAALLKLEPALQRLNAARPTAVNLAWALARMRRALATAGADWREVATREAQ 132
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N R+ L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 133 AIADEDLAANRRMGALGAALVAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAEGRIAKV 192
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
Y GE +L AR T +++ D + ++L A ++ + +KT +
Sbjct: 193 -------------YAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAAAHLMKTGAV 235
Query: 206 QLI 208
Q +
Sbjct: 236 QWV 238
>gi|389736346|ref|ZP_10189906.1| methylthioribose-1-phosphate isomerase [Rhodanobacter sp. 115]
gi|388439483|gb|EIL96038.1| methylthioribose-1-phosphate isomerase [Rhodanobacter sp. 115]
Length = 337
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L SARPTAVN+ A D +K+ ++ L + +++ ++D++ N+ +G
Sbjct: 79 LAQLRSARPTAVNLMWALDRMKARIA-------AGADAAALEREAQAIQDEDLAANRRMG 131
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI + GV LTHCNTGSLATA +GTALGVIR+ A +I + ETRP+
Sbjct: 132 ELGA-ALIAPHSGV-----LTHCNTGSLATAGFGTALGVIRAGVAAGRIERVFAGETRPW 185
Query: 284 NQGAR 288
QGAR
Sbjct: 186 QQGAR 190
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 109/238 (45%), Gaps = 56/238 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ +++ L++LDQ LLP + +D + QAI+ + VRGAPAI I G+V+
Sbjct: 9 IRAVQWQRDHLRLLDQRLLPQEERWIDCRDAGQVTQAIRDLAVRGAPAIGIAAAWGVVLA 68
Query: 64 IKDKQFPDNELIQL---------------------------------IESMLEKDISDNK 90
+ D L QL +++ ++D++ N+
Sbjct: 69 AQQHVSLDLALAQLRSARPTAVNLMWALDRMKARIAAGADAAALEREAQAIQDEDLAANR 128
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQF 150
+G GA ALI VLTHCNTGSLATA +GTALGVIR+ A +I +
Sbjct: 129 RMGELGA-ALI-----APHSGVLTHCNTGSLATAGFGTALGVIRAGVAAGRIERV----- 177
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
+ GE + AR T + R D + + L A ++ + +K+ IQ +
Sbjct: 178 --------FAGETRPWQQGARLTMYELVR--DGIPAKLI--ADSAAAHLMKSGEIQWV 223
>gi|118575785|ref|YP_875528.1| translation initiation factor 2B subunit, eIF-2B alpha/beta/delta
family [Cenarchaeum symbiosum A]
gi|118194306|gb|ABK77224.1| translation initiation factor 2B subunit, eIF-2B alpha/beta/delta
family [Cenarchaeum symbiosum A]
Length = 346
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
DSL + D L+ RPTAVN+K ++ +L+ K + ++++ ++ +M E
Sbjct: 76 DSLMADLCTARDELLGTRPTAVNLKWG---LERALAAAEKCTDADSMRRAVVDESLAMAE 132
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D+ NK +G+NG+ + D V+THCN G+LAT YGTALGVIR+ A K
Sbjct: 133 EDVKTNKEMGKNGSGLIGDGE------TVMTHCNAGALATVSYGTALGVIRATREAGKNI 186
Query: 274 AAYCTETRPYNQGAR 288
TETRP QG+R
Sbjct: 187 RVIATETRPVQQGSR 201
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+M E+D+ NK +G+NG+ + D V+THCN G+LAT YGTALGVIR+ A
Sbjct: 129 AMAEEDVKTNKEMGKNGSGLIGDGE------TVMTHCNAGALATVSYGTALGVIRATREA 182
Query: 140 NK 141
K
Sbjct: 183 GK 184
>gi|160902276|ref|YP_001567857.1| aIF-2BI family translation initiation factor [Petrotoga mobilis
SJ95]
gi|218526584|sp|A9BHC5.1|MTNA2_PETMO RecName: Full=Methylthioribose-1-phosphate isomerase 2; Short=M1Pi
2; Short=MTR-1-P isomerase 2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 2
gi|160359920|gb|ABX31534.1| translation initiation factor, aIF-2BI family [Petrotoga mobilis
SJ95]
Length = 349
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 18/167 (10%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA +G LG A + + DK N LE E + L RPTAVN+ A
Sbjct: 56 ATAAFGFVLG-------AKEFSYLSDKNLFSN-KLE----EVKNSLSKTRPTAVNLFWAL 103
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ + L + +N + T L + + +DI NK IG+NG +AL LN G +
Sbjct: 104 NRMDKILKDNLPTKEINDLVTILEEEALKIAYEDIEINKQIGKNG-EAL--LNDGDT--- 157
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT +YGTALGVIR+ K Y ETRPY QGAR
Sbjct: 158 VLTHCNAGALATVDYGTALGVIRAAVENGKDIQVYADETRPYLQGAR 204
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 103/240 (42%), Gaps = 73/240 (30%)
Query: 1 MKSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
MK+++++ E +SL ++DQ LP K V+ N D +IK M VRGAPAI
Sbjct: 1 MKNIKTMTMEWTGNSLILIDQRYLPIEEKYVECQNYLDVANSIKDMVVRGAPAIGATAAF 60
Query: 59 GLVVDIK---------------------------------------DKQFPD-------N 72
G V+ K DK D N
Sbjct: 61 GFVLGAKEFSYLSDKNLFSNKLEEVKNSLSKTRPTAVNLFWALNRMDKILKDNLPTKEIN 120
Query: 73 ELIQLIES----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
+L+ ++E + +DI NK IG+NG L D + VLTHCN G+LAT +YGT
Sbjct: 121 DLVTILEEEALKIAYEDIEINKQIGKNGEALLNDGD------TVLTHCNAGALATVDYGT 174
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
ALGVIR+ + + KD Q Y E YL AR T + ++ +K++L
Sbjct: 175 ALGVIRA-----AVENGKDIQV--------YADETRPYLQGARLTVWELVKSG--IKTTL 219
>gi|153871228|ref|ZP_02000454.1| translation initiation factor, putative, aIF-2BI family [Beggiatoa
sp. PS]
gi|152072310|gb|EDN69550.1| translation initiation factor, putative, aIF-2BI family [Beggiatoa
sp. PS]
Length = 194
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ARPTAVN+ A + +K+ +P + L+ + +LE+DI N +G G
Sbjct: 4 LAQARPTAVNLVWALERMKAYFVN-VTGNP----EPALLAEAQRILEEDIDANHRMGDLG 58
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L S VLTHCN G+LAT YGTALGVIRS + A KI Y ETRP+ QG
Sbjct: 59 AGLL------PSNCRVLTHCNAGALATGGYGTALGVIRSGYAAGKITQVYADETRPWLQG 112
Query: 287 AR 288
AR
Sbjct: 113 AR 114
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 53/108 (49%), Gaps = 19/108 (17%)
Query: 70 PDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
P+ L+ + +LE+DI N +G GA L S VLTHCN G+LAT YGTA
Sbjct: 32 PEPALLAEAQRILEEDIDANHRMGDLGAGLL------PSNCRVLTHCNAGALATGGYGTA 85
Query: 130 LGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
LGVIRS + A KI + Y E +L AR TA +
Sbjct: 86 LGVIRSGYAAGKITQV-------------YADETRPWLQGARLTAWEL 120
>gi|134299910|ref|YP_001113406.1| aIF-2BI family translation initiation factor [Desulfotomaculum
reducens MI-1]
gi|218526611|sp|A4J678.1|MTNA_DESRM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|134052610|gb|ABO50581.1| methylthioribose-1-phosphate isomerase [Desulfotomaculum reducens
MI-1]
Length = 346
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
GA ++ K F + LE GE L + RPTAVN++ A D + LS A V
Sbjct: 60 GAQQVDATDRKTF--LEKLEAIAGE----LGATRPTAVNLRWALDRMMMRLST-APEQNV 112
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
++ +++ ++ +D+ N+ +G G + L + + VLTHCN G+LATA YG
Sbjct: 113 EDLRKIMLEEAHAIYNEDVESNRKMGEYGQELLPE------EARVLTHCNAGALATAGYG 166
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGV+R+ H K Y ETRP QGAR
Sbjct: 167 TALGVVRAAHEKGKKVHVYADETRPLLQGAR 197
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------G 48
+ +II+E + L++LDQ LP T + + + +AIK + VR G
Sbjct: 1 MNAIIWENNQLQLLDQTKLPRTIEYIQCTDYHTVGKAIKKLSVRGAPAIGAAAAYGLVVG 60
Query: 49 APAI-------------AIVGCLG----LVVDIK---DKQF------PDNELIQLIESML 82
A + AI G LG V+++ D+ P+ + L + ML
Sbjct: 61 AQQVDATDRKTFLEKLEAIAGELGATRPTAVNLRWALDRMMMRLSTAPEQNVEDLRKIML 120
Query: 83 EK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+ D+ N+ +G G + L + + VLTHCN G+LATA YGTALGV+R+
Sbjct: 121 EEAHAIYNEDVESNRKMGEYGQELLPE------EARVLTHCNAGALATAGYGTALGVVRA 174
Query: 136 LHGANKIVDI 145
H K V +
Sbjct: 175 AHEKGKKVHV 184
>gi|430745832|ref|YP_007204961.1| S-methyl-5-thioribose-1-phosphate isomerase [Singulisphaera
acidiphila DSM 18658]
gi|430017552|gb|AGA29266.1| S-methyl-5-thioribose-1-phosphate isomerase [Singulisphaera
acidiphila DSM 18658]
Length = 363
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D DSL + + + YL ++RPTAVN+ A D ++ ++ E + T+ R++ ++
Sbjct: 81 DLDSLRRGLLDASAYLRTSRPTAVNLFWALDRIERTIEE-NRGLDGPTLLERVLTEARAI 139
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D ++IGR GA+ L+ G+ LTHCN G LATA+YGTAL VI S H A K
Sbjct: 140 ADEDKVMCRSIGRFGAE-LVGTGQGI-----LTHCNAGGLATADYGTALAVIFSAHSAGK 193
Query: 272 IGAAYCTETRPYNQGAR 288
+ ETRP QGAR
Sbjct: 194 AVHVFADETRPLLQGAR 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 19/90 (21%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IGR GA+ + + +LTHCN G LATA+YGTAL VI S H A K V +
Sbjct: 148 RSIGRFGAELV------GTGQGILTHCNAGGLATADYGTALAVIFSAHSAGKAVHV---- 197
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ E L AR TA ++R
Sbjct: 198 ---------FADETRPLLQGARLTAWELQR 218
>gi|198283143|ref|YP_002219464.1| translation initiation factor, aIF-2BI family [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218665258|ref|YP_002425371.1| aIF-2BI family translation initiation factor [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198247664|gb|ACH83257.1| translation initiation factor, aIF-2BI family [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517471|gb|ACK78057.1| translation initiation factor, putative, aIF-2BI family
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 350
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 9/124 (7%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + +ARPTAVN+ A D + +L++ S L+Q +L DI+DN+ +GR
Sbjct: 85 DEIKAARPTAVNLAWATDR-QLALAQ--SVSTAGQAVAALLQAAHDLLRDDIADNQRLGR 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A K Y ETRP+
Sbjct: 142 YGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGISAGKQLHIYADETRPWL 195
Query: 285 QGAR 288
QGAR
Sbjct: 196 QGAR 199
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 63/220 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I +E+ L +LDQ LLP + +++ AI+ M VRGAPAI I + +
Sbjct: 7 IRAIRWEEGQLCLLDQRLLPQQETWLKLSDYRAVAVAIRQMVVRGAPAIGITAAYAMALA 66
Query: 64 IKDKQ---------------------------FPDNELIQLIES---------------- 80
+++ + + + L +S
Sbjct: 67 VREASTHTDWQARLLSAADEIKAARPTAVNLAWATDRQLALAQSVSTAGQAVAALLQAAH 126
Query: 81 -MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+L DI+DN+ +GR GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A
Sbjct: 127 DLLRDDIADNQRLGRYGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGISA 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K L Y E +L AR TA +++
Sbjct: 181 GK-------------QLHIYADETRPWLQGARLTAWELQK 207
>gi|415975228|ref|ZP_11558826.1| translation initiation factor, putative, aIF-2BI family protein,
partial [Acidithiobacillus sp. GGI-221]
gi|339833927|gb|EGQ61727.1| translation initiation factor, putative, aIF-2BI family protein
[Acidithiobacillus sp. GGI-221]
Length = 223
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 9/124 (7%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + +ARPTAVN+ A D + +L++ S L+Q +L DI+DN+ +GR
Sbjct: 85 DEIKAARPTAVNLAWATDR-QLALAQ--SVSTAGQAVAALLQAAHDLLRDDIADNQRLGR 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A K Y ETRP+
Sbjct: 142 YGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGISAGKQLHIYADETRPWL 195
Query: 285 QGAR 288
QGAR
Sbjct: 196 QGAR 199
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 63/220 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I +E+ L +LDQ LLP + +++ AI+ M VRGAPAI I + +
Sbjct: 7 IRAIRWEEGQLCLLDQRLLPQQETWLKLSDYRAVAVAIRQMVVRGAPAIGITAAYAMALA 66
Query: 64 IKDKQ---------------------------FPDNELIQLIES---------------- 80
+++ + + + L +S
Sbjct: 67 VREASTHTDWQARLLSAADEIKAARPTAVNLAWATDRQLALAQSVSTAGQAVAALLQAAH 126
Query: 81 -MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+L DI+DN+ +GR GA+ L ++ +LTHCNTGSLAT YGTALGVIR+ A
Sbjct: 127 DLLRDDIADNQRLGRYGAELL------PAEGGILTHCNTGSLATGGYGTALGVIRAGISA 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K + I Y E +L AR TA +++
Sbjct: 181 GKQLHI-------------YADETRPWLQGARLTAWELQK 207
>gi|153007171|ref|YP_001381496.1| eIF-2B alpha/beta/delta-like protein [Anaeromyxobacter sp. Fw109-5]
gi|218526589|sp|A7HIG6.1|MTNA_ANADF RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|152030744|gb|ABS28512.1| eIF-2B alpha/beta/delta-related uncharacterized protein
[Anaeromyxobacter sp. Fw109-5]
Length = 337
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 93/212 (43%), Gaps = 51/212 (24%)
Query: 2 KSLQSIIYE--KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
+ L+ +IY+ + +++LDQ LP +D+ + ++ QAIK + VRGAPAI + G
Sbjct: 4 QPLRPVIYDEGRDVVRVLDQRRLPSEEVWLDLASCDEVVQAIKDLTVRGAPAIGVAAAYG 63
Query: 60 LVVDIKDKQFP------DNELIQ-------------------------LIESMLEKDISD 88
L ++ + P L+ L+E D
Sbjct: 64 LALESRRGAEPARLREASERLVHARPTAVNLAWAVRRMSRRLGLGPAALLEEAHAIRDED 123
Query: 89 NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIVDIKD 147
A R GA L PR S VLTHCN G+LATA YGTALGV+R ++ G N + D
Sbjct: 124 EAACRRIGALGAALLPPRAS---VLTHCNAGALATAGYGTALGVVRAAVEGGNPVTVFAD 180
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ P +L AR TA +KR
Sbjct: 181 ETRP--------------FLQGARLTAWELKR 198
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 17/128 (13%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E + LV ARPTAVN+ A + L A L++ ++ ++D + +
Sbjct: 79 EASERLVHARPTAVNLAWAVRRMSRRLGLGPAA---------LLEEAHAIRDEDEAACRR 129
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIGAAYCTET 280
IG GA L + +VLTHCN G+LATA YGTALGV+R ++ G N + + ET
Sbjct: 130 IGALGAALL------PPRASVLTHCNAGALATAGYGTALGVVRAAVEGGNPV-TVFADET 182
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 183 RPFLQGAR 190
>gi|383828631|ref|ZP_09983720.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
xinjiangensis XJ-54]
gi|383461284|gb|EID53374.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
xinjiangensis XJ-54]
Length = 338
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ARPTAVN++ + + L +A + + +ML+ D N+A R+
Sbjct: 86 LARARPTAVNLRHGVERALAVLEHGPEAVLADAL---------AMLDTDERINRAASRHA 136
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L+ L PG +L VLTHCNTG LAT +GTALG IR LH ++ ETRP QG
Sbjct: 137 ADLLLRLCPG-RRLRVLTHCNTGRLATVAWGTALGAIRHLHAEGRLEVVLADETRPLLQG 195
Query: 287 AR 288
+R
Sbjct: 196 SR 197
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ML+ D N+A R+ A L+ L P +L VLTHCNTG LAT +GTALG IR LH
Sbjct: 120 AMLDTDERINRAASRHAADLLLRLCPG-RRLRVLTHCNTGRLATVAWGTALGAIRHLHAE 178
Query: 140 NKI-VDIKDKQFP 151
++ V + D+ P
Sbjct: 179 GRLEVVLADETRP 191
>gi|404493814|ref|YP_006717920.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Pelobacter
carbinolicus DSM 2380]
gi|123573761|sp|Q3A2J8.1|MTNA_PELCD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|77545847|gb|ABA89409.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Pelobacter
carbinolicus DSM 2380]
Length = 344
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 10/140 (7%)
Query: 152 DNDSLEKYVG---EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
+ DS E ++ D L + RPTAVN+ A + +++ E A A P++ +K L+
Sbjct: 67 EADSFESFLAALKNVCDTLAATRPTAVNLFWALERMQAKARELA-ALPLDAIKAALMDEA 125
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+++ +D + N+A+GR+GA+ + D VLTHCN G+LAT YGTALGVIR+
Sbjct: 126 QAIAAQDDAINRAMGRHGAELIAD------NARVLTHCNAGALATGGYGTALGVIRAAVE 179
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+ K + ETRP+ QG+R
Sbjct: 180 SGKKISVLADETRPFLQGSR 199
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 7/64 (10%)
Query: 89 NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIVDIKD 147
N+A+GR+GA+ + D N RV LTHCN G+LAT YGTALGVIR ++ KI + D
Sbjct: 136 NRAMGRHGAELIAD-NARV-----LTHCNAGALATGGYGTALGVIRAAVESGKKISVLAD 189
Query: 148 KQFP 151
+ P
Sbjct: 190 ETRP 193
>gi|39998468|ref|NP_954419.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
sulfurreducens PCA]
gi|409913820|ref|YP_006892285.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
sulfurreducens KN400]
gi|81700889|sp|Q746Y8.1|MTNA_GEOSL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|39985415|gb|AAR36769.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
sulfurreducens PCA]
gi|298507412|gb|ADI86135.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
sulfurreducens KN400]
Length = 346
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 71/124 (57%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + RPTAVN+ A + +K E + P++ ++ L + ++D+ KAIGR
Sbjct: 83 DVMARTRPTAVNLFWAIERMKRVADE-NRDKPLDQLREILKTEAIRIEQEDLELCKAIGR 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+GA ALI VLTHCN G LATA YGTALGVIR+ H A K + ETRP+
Sbjct: 142 HGA-ALIP-----EGATVLTHCNAGGLATAGYGTALGVIRAAHDAGKKIQVFADETRPWL 195
Query: 285 QGAR 288
QGAR
Sbjct: 196 QGAR 199
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 93/225 (41%), Gaps = 67/225 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
S ++I + + ++DQ LP + + + +AI+ M +RGAPAI + +G+
Sbjct: 2 SFRTIEWRDDKVVMIDQTRLPGEEVYCEYADYKSVAEAIRGMVIRGAPAIGVAAAMGVAL 61
Query: 61 -------------------VVDIKDKQFP--------------------DNELIQLIE-- 79
V D+ + P D L QL E
Sbjct: 62 GAREIIADTYESFFRQMENVCDVMARTRPTAVNLFWAIERMKRVADENRDKPLDQLREIL 121
Query: 80 -----SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ ++D+ KAIGR+GA ALI VLTHCN G LATA YGTALGVIR
Sbjct: 122 KTEAIRIEQEDLELCKAIGRHGA-ALIP-----EGATVLTHCNAGGLATAGYGTALGVIR 175
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ H A K + + + E +L AR TA + +
Sbjct: 176 AAHDAGKKIQV-------------FADETRPWLQGARLTAWELMK 207
>gi|380511909|ref|ZP_09855316.1| methylthioribose-1-phosphate isomerase [Xanthomonas sacchari NCPPB
4393]
Length = 354
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A ++++L A S +V R Q I E+D++ N+ +G
Sbjct: 94 LQRLNAARPTAVNLAWALARMRTALG--AAGSDWRSVLEREAQAIA---EEDLAANRHMG 148
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA LI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+
Sbjct: 149 ALGA-GLI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGVAQQRIAKVFAGETRPW 202
Query: 284 NQGAR 288
QGAR
Sbjct: 203 LQGAR 207
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ + AI ++ VRGAPAI I G V+
Sbjct: 15 IRPILWTGDALELLDQRKLPFAVEHVRCSDSDQVAAAIHALAVRGAPAIGIAAGWGTVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK------------------------DISDNKAIGRNGAQ 98
++ Q D E + +E L++ SD +++ AQ
Sbjct: 75 AREVQAEDGAEALLKLEPALQRLNAARPTAVNLAWALARMRTALGAAGSDWRSVLEREAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ + N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 135 AIAEEDLAANRHMGALGAGLIAPGSGVLTHCNTGSLATAGFGTALGVIRAGVAQQRIAKV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +KT +
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKTGAV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|288941705|ref|YP_003443945.1| translation initiation factor, aIF-2BI family [Allochromatium
vinosum DSM 180]
gi|288897077|gb|ADC62913.1| translation initiation factor, aIF-2BI family [Allochromatium
vinosum DSM 180]
Length = 351
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L ++RPTAVN+ A ++ ++ + P L+ ++ E+D + N+ IG
Sbjct: 91 LERLAASRPTAVNLFWAIRRMRDLIARLEASDPSQA----LLDEALAIHEEDRAANRRIG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA+ + + ++THCN G+LAT YGTALGV+RS H A KI Y ETRP+
Sbjct: 147 DLGAELITE------PTEIITHCNAGALATGGYGTALGVVRSAHAAGKIQRVYADETRPW 200
Query: 284 NQGAR 288
QGAR
Sbjct: 201 MQGAR 205
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 52/209 (24%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDK 67
++ L + DQ +LP ++ + + + AI+ M VRGAPAI + G+ + ++
Sbjct: 16 LWHDGRLYLADQRILPERAEFLSYDRAAEVATAIRDMVVRGAPAIGVAAAYGVALAGREA 75
Query: 68 QF-PDNELIQLIESMLEKDISDNK-------AIGR-----------NGAQALID------ 102
+ Q IE+ LE+ + AI R + +QAL+D
Sbjct: 76 YSNAGADWKQAIEADLERLAASRPTAVNLFWAIRRMRDLIARLEASDPSQALLDEALAIH 135
Query: 103 -----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDK 148
N R+ L ++THCN G+LAT YGTALGV+RS H A KI +
Sbjct: 136 EEDRAANRRIGDLGAELITEPTEIITHCNAGALATGGYGTALGVVRSAHAAGKIQRV--- 192
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
Y E ++ AR TA +
Sbjct: 193 ----------YADETRPWMQGARLTAWEL 211
>gi|379012885|ref|YP_005270697.1| 5-methylthioribose-1-phosphate isomerase MtnA [Acetobacterium
woodii DSM 1030]
gi|375303674|gb|AFA49808.1| 5-methylthioribose-1-phosphate isomerase MtnA [Acetobacterium
woodii DSM 1030]
Length = 345
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 101/205 (49%), Gaps = 24/205 (11%)
Query: 94 RNGAQALIDLNPRVSKLNVLTHCNTGSLATA------EYGTALGVIRSLHGANKIVDIKD 147
NG LID + + ++ + +ATA A+GV ++ KD
Sbjct: 7 ENGELKLIDQTKLPTTFIIHSYTDYREIATAITDMIVRGAPAIGVTAGYGVYFGALEYKD 66
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
+ D + E L S RPTAVN+ A +++ + P TRL+++
Sbjct: 67 EP---KDIFYDKMKEVCALLASTRPTAVNLFWAIKRMEAVIEANKDKDP-----TRLVEI 118
Query: 208 IE----SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
++ ++ +DI + +G++GA+ LI +LTHCN G+LATA+YGTALGVI
Sbjct: 119 LKDEANAICSEDIQMCRDMGKHGAE-LIHYGD-----TILTHCNAGALATADYGTALGVI 172
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R+ H A K + Y ETRP+ QGAR
Sbjct: 173 RAAHEAGKNISVYADETRPFLQGAR 197
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 57/227 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL--- 60
++ + YE LK++DQ LP T + + + AI M VRGAPAI + G+
Sbjct: 1 MKPVYYENGELKLIDQTKLPTTFIIHSYTDYREIATAITDMIVRGAPAIGVTAGYGVYFG 60
Query: 61 VVDIKDKQ---FPD--NELIQLIESM-------------LEKDISDNK------------ 90
++ KD+ F D E+ L+ S +E I NK
Sbjct: 61 ALEYKDEPKDIFYDKMKEVCALLASTRPTAVNLFWAIKRMEAVIEANKDKDPTRLVEILK 120
Query: 91 ----AIGRNGAQALIDLNPRVSKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
AI Q D+ ++L +LTHCN G+LATA+YGTALGVIR+ H A K
Sbjct: 121 DEANAICSEDIQMCRDMGKHGAELIHYGDTILTHCNAGALATADYGTALGVIRAAHEAGK 180
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ + Y E +L AR TA ++ AD + +L
Sbjct: 181 NISV-------------YADETRPFLQGARLTAYELQ--ADGIPVTL 212
>gi|325106712|ref|YP_004267780.1| methylthioribose-1-phosphate isomerase [Planctomyces brasiliensis
DSM 5305]
gi|324966980|gb|ADY57758.1| Methylthioribose-1-phosphate isomerase [Planctomyces brasiliensis
DSM 5305]
Length = 577
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
+ +++ + D + + + + YL +RPTAVN+ A D ++ E A P+ V+
Sbjct: 62 LTGLREAKSQDRAAFDAALDKVCTYLAESRPTAVNLFWALDRMRRVAGEQTGAEPL-AVR 120
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
RL++ ++ +D A+GR GA+ LI+ GV LTHCNTG+LATA GTAL
Sbjct: 121 NRLLEEARAIEIEDREMCAAMGRFGAE-LINQGDGV-----LTHCNTGALATAGDGTALA 174
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VI + H A K Y ETRP QGAR
Sbjct: 175 VIFAAHEAGKGIHVYADETRPLLQGAR 201
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 98/242 (40%), Gaps = 70/242 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K+++ I L++LDQ LP + +D E Y AI+ + VRGAPAI + G+
Sbjct: 2 IKTIEWIGEADGHLRLLDQTALPTETVFLDCETPEQVYAAIQRLSVRGAPAIGVSAAYGV 61
Query: 61 VVDIKDKQFPDNELI--------------------------------------------- 75
+ +++ + D
Sbjct: 62 LTGLREAKSQDRAAFDAALDKVCTYLAESRPTAVNLFWALDRMRRVAGEQTGAEPLAVRN 121
Query: 76 QLIESMLEKDISDNK---AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+L+E +I D + A+GR GA+ LI+ VLTHCNTG+LATA GTAL V
Sbjct: 122 RLLEEARAIEIEDREMCAAMGRFGAE-LINQGD-----GVLTHCNTGALATAGDGTALAV 175
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM-KRAADS--VKSSLS 189
I + H A K + + Y E L AR TA + +R S + S++
Sbjct: 176 IFAAHEAGKGIHV-------------YADETRPLLQGARLTAWELQQRGVPSTLICDSMA 222
Query: 190 EW 191
W
Sbjct: 223 AW 224
>gi|157364532|ref|YP_001471299.1| eIF-2B alpha/beta/delta-like protein [Thermotoga lettingae TMO]
gi|218526585|sp|A8F7V1.1|MTNA2_THELT RecName: Full=Methylthioribose-1-phosphate isomerase 2; Short=M1Pi
2; Short=MTR-1-P isomerase 2; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 2
gi|157315136|gb|ABV34235.1| eIF-2B alpha/beta/delta-related uncharacterized protein [Thermotoga
lettingae TMO]
Length = 345
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 64/223 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M + +SI ++K L +LDQ LP + +++ V++ +AIK M VRGAPAI + G+
Sbjct: 1 MSTFRSIEWKKDKLVLLDQRYLPEKTLYLELKTVDEVARAIKEMTVRGAPAIGVAAAYGM 60
Query: 61 VVD----------IKDKQFPDNEL---------------------------IQLIESMLE 83
V+ I++ Q D+ L ++ ++ +LE
Sbjct: 61 VLCVQKLSKNDDLIRELQKADDLLRASRPTAVNLFWALDRMKKIWQGFNGSLEDLKMILE 120
Query: 84 KDISD--------NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
K+ +D NK I +NG ++L P +K ++ HCNTGSLAT +YGTALGVIR
Sbjct: 121 KEATDIEREDVEINKQIAKNG----VELVPFGAK--IIHHCNTGSLATVDYGTALGVIRY 174
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
H K + + ++ E L AR +A MK
Sbjct: 175 AHEIGKKIHV-------------FLDETRPRLQGARLSAWEMK 204
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
ND L + + + D L ++RPTAVN+ A D +K + + + +K L + +
Sbjct: 70 NDDLIRELQKADDLLRASRPTAVNLFWALDRMKKIWQGFNGS--LEDLKMILEKEATDIE 127
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
+D+ NK I +NG ++L P +K ++ HCNTGSLAT +YGTALGVIR H K
Sbjct: 128 REDVEINKQIAKNG----VELVPFGAK--IIHHCNTGSLATVDYGTALGVIRYAHEIGKK 181
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP QGAR
Sbjct: 182 IHVFLDETRPRLQGAR 197
>gi|239787603|emb|CAX84071.1| Translation initiation factor 2B [uncultured bacterium]
Length = 349
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 6/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A + + P V RL+ E++ +DI +A+G G
Sbjct: 87 LRAARPTAVNLVWALERLMPLFD----GVP-ERVPERLLAEAEAIRREDIDSCRAMGAAG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A A++ + P L ++THCN G+LATA YGTALGVIR+ + Y TETRP+ QG
Sbjct: 142 A-AILPVPPTGRPLAIMTHCNAGALATAGYGTALGVIRAARERSGPVVVYATETRPFLQG 200
Query: 287 AR 288
AR
Sbjct: 201 AR 202
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 61/225 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA------- 53
M ++ +++LDQ LP ++ + + AI+ M VRGAPAI
Sbjct: 1 MTVFDVAVWRDGRVRMLDQRRLPGEEVYLEFLSAAEVAWAIREMVVRGAPAIGCAAAFGV 60
Query: 54 ------------------------------------IVGCLGLVVDIKD---KQFPDNEL 74
+V L ++ + D ++ P+ L
Sbjct: 61 AAEAFRLARDGIPPSWAGAMAPAMALLRAARPTAVNLVWALERLMPLFDGVPERVPER-L 119
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ E++ +DI +A+G GA A++ + P L ++THCN G+LATA YGTALGVIR
Sbjct: 120 LAEAEAIRREDIDSCRAMGAAGA-AILPVPPTGRPLAIMTHCNAGALATAGYGTALGVIR 178
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ +++ P + Y E +L AR TA + R
Sbjct: 179 A---------ARERSGP----VVVYATETRPFLQGARLTAWELLR 210
>gi|53803950|ref|YP_114406.1| initiation factor 2 subunit family protein [Methylococcus
capsulatus str. Bath]
gi|81681677|sp|Q606P2.1|MTNA_METCA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|53757711|gb|AAU92002.1| initiation factor 2 subunit family protein [Methylococcus
capsulatus str. Bath]
Length = 352
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 11/137 (8%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D ++ V + + L +RPTAVN+ A + ++ +++ + PV L+ +
Sbjct: 79 DPAHWKRAVEDDIAVLARSRPTAVNLFWALERMREAMAA-IEGDPVPA----LLAAARRI 133
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E D++ N A+G GA L G K VLTHCNTG+LAT YGTALGVIRS
Sbjct: 134 HEDDLAANLAMGELGAAIL-----GGCK-GVLTHCNTGALATGGYGTALGVIRSTWRRGA 187
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y TETRP++QGAR
Sbjct: 188 LERVYATETRPWSQGAR 204
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 50/179 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+ ++Q++ + L++LDQ LLP + +AI SM+VRGAPAI I G+
Sbjct: 9 VSAVQALKWSDGGLEVLDQRLLPGDVVYQIFDTAAGVAEAIASMRVRGAPAIGIAAAYGV 68
Query: 61 VVDIKDKQFPDNE----------------------LIQLIESMLEK-------------- 84
V+ + D L +E M E
Sbjct: 69 VLGARAAYARDPAHWKRAVEDDIAVLARSRPTAVNLFWALERMREAMAAIEGDPVPALLA 128
Query: 85 --------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
D++ N A+G GA L VLTHCNTG+LAT YGTALGVIRS
Sbjct: 129 AARRIHEDDLAANLAMGELGAAILGGCK------GVLTHCNTGALATGGYGTALGVIRS 181
>gi|148266332|ref|YP_001233038.1| aIF-2BI family translation initiation factor [Geobacter
uraniireducens Rf4]
gi|218526619|sp|A5G9J7.1|MTNA_GEOUR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|146399832|gb|ABQ28465.1| methylthioribose-1-phosphate isomerase [Geobacter uraniireducens
Rf4]
Length = 346
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
++S + + + + RPTAVN+ A + +K ++E + +N+++ L +
Sbjct: 71 HESFFRQLDNVCNVMARTRPTAVNLFWAIERMKR-VAESHRDKDLNSIREILKAEAIRIE 129
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
E+D+ +AIGRNGA + + +LTHCN G LATA YGTALGVIR+ H A K
Sbjct: 130 EEDLEICRAIGRNGAPLIKE------GATILTHCNAGGLATAGYGTALGVIRAAHEAGKR 183
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 184 IQVFADETRPWLQGAR 199
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 54/191 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
S ++I + + + ++DQ LP + + + +AI+ M +RGAPAI + +G+
Sbjct: 2 SFRTIEWRDNKVVMIDQTRLPGEEVYNEYTDFQSVAEAIRGMIIRGAPAIGVAAAMGIAL 61
Query: 61 -----VVDIKDKQFP--DN-------------ELIQLIESML------------------ 82
+ D + F DN L IE M
Sbjct: 62 GAREIIADTHESFFRQLDNVCNVMARTRPTAVNLFWAIERMKRVAESHRDKDLNSIREIL 121
Query: 83 --------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E+D+ +AIGRNGA + + +LTHCN G LATA YGTALGVIR
Sbjct: 122 KAEAIRIEEEDLEICRAIGRNGAPLIKE------GATILTHCNAGGLATAGYGTALGVIR 175
Query: 135 SLHGANKIVDI 145
+ H A K + +
Sbjct: 176 AAHEAGKRIQV 186
>gi|237749191|ref|ZP_04579671.1| translation initiation factor 2B subunit I family [Oxalobacter
formigenes OXCC13]
gi|229380553|gb|EEO30644.1| translation initiation factor 2B subunit I family [Oxalobacter
formigenes OXCC13]
Length = 352
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 85/165 (51%), Gaps = 20/165 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG AL I + A+ + + SLE E L ++RPTAVN+ A D
Sbjct: 57 AAYGVALEAILRKNEASNVF---------STSLE----EGFKALAASRPTAVNLFWALDR 103
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
++ L E +A + + +LE+DI N+A+G GA L D + VL
Sbjct: 104 MRK-LWETHQAKNQPELADIFLGTAHEILEEDIRINRAMGEYGASLLPDGS------RVL 156
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA +GTALGV RS A K + + ETRP+ QGAR
Sbjct: 157 THCNAGALATAGHGTALGVFRSAVEAGKRISVFADETRPFLQGAR 201
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 67/222 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC------ 57
++++ + +++++DQ +LPH + + ++ + +AI+ M VRGAPAI +
Sbjct: 5 VETLRWNGSAIEMIDQRILPHRIEYIACDSAQSVAKAIRDMVVRGAPAIGVAAAYGVALE 64
Query: 58 --------------------------------LGLVVDIKDKQFPDNE----------LI 75
L +D K + ++ +
Sbjct: 65 AILRKNEASNVFSTSLEEGFKALAASRPTAVNLFWALDRMRKLWETHQAKNQPELADIFL 124
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+LE+DI N+A+G GA L D + VLTHCN G+LATA +GTALGV RS
Sbjct: 125 GTAHEILEEDIRINRAMGEYGASLLPDGS------RVLTHCNAGALATAGHGTALGVFRS 178
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
A K + + + E +L AR TA M
Sbjct: 179 AVEAGKRISV-------------FADETRPFLQGARLTAWEM 207
>gi|78043183|ref|YP_360388.1| aIF-2BI family translation initiation factor [Carboxydothermus
hydrogenoformans Z-2901]
gi|123576081|sp|Q3ABU6.1|MTNA_CARHZ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|77995298|gb|ABB14197.1| putative translation initiation factor, aIF-2BI family
[Carboxydothermus hydrogenoformans Z-2901]
Length = 343
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
+ ++ +LE Y+ + L + RPTAVN+ A D + E K + L+
Sbjct: 64 YRNDQNLEVYLKNVYETLKNTRPTAVNLFWALDRMWKKYLE-VKNQTFEEIANALLNEAN 122
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
S+ +DI NK IG G + + + ++LTHCN G+LATA YGTALGV+R+ A
Sbjct: 123 SIFYEDIELNKKIGAYGLEVVPE------NASILTHCNAGALATAGYGTALGVVRAAFEA 176
Query: 270 NKIGAAYCTETRPYNQGAR 288
K+ + ETRP QGAR
Sbjct: 177 GKLRKVFADETRPLLQGAR 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 52/185 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIA-------IVG 56
+ ++ ++ ++L +LDQ LP K V + E+ +AI SM+VRGAPAI ++G
Sbjct: 1 MDTMYWKDNTLFLLDQTKLPIEVKYVKLKTYEEVAEAIVSMKVRGAPAIGAAAAYGMVLG 60
Query: 57 CLGL-------------------------------------VVDIKDKQFPD--NELIQL 77
+G +++K++ F + N L+
Sbjct: 61 VMGYRNDQNLEVYLKNVYETLKNTRPTAVNLFWALDRMWKKYLEVKNQTFEEIANALLNE 120
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
S+ +DI NK IG G + + + ++LTHCN G+LATA YGTALGV+R+
Sbjct: 121 ANSIFYEDIELNKKIGAYGLEVVPE------NASILTHCNAGALATAGYGTALGVVRAAF 174
Query: 138 GANKI 142
A K+
Sbjct: 175 EAGKL 179
>gi|434391680|ref|YP_007126627.1| methylthioribose-1-phosphate isomerase [Gloeocapsa sp. PCC 7428]
gi|428263521|gb|AFZ29467.1| methylthioribose-1-phosphate isomerase [Gloeocapsa sp. PCC 7428]
Length = 353
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+++ ++S+ ++DQ LPH V+I+ ED QAIK+M VRGAPAI + G+ + +
Sbjct: 11 VVWYENSVLLIDQTRLPHEYGFVEIHRCEDMAQAIKTMIVRGAPAIGVAAAYGMYLGARA 70
Query: 67 KQFPDNE-----------------------------------------------LIQLIE 79
Q + + L+Q +
Sbjct: 71 IQTQNRDEFLHQLEEVAVMLRATRPTAVNLFWAIARMLKTAYETLGSVAEIQQALLQTAQ 130
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ +D+ +AIG G + L P KLN+LTHCN G+LATA YGTALGV+R
Sbjct: 131 TINAEDLQTCQAIGDRGLEVLPS-TPE--KLNILTHCNAGALATAGYGTALGVVRCAWAK 187
Query: 140 NKIVDI 145
++ +
Sbjct: 188 GRLARV 193
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG R++ N+ D + E L + RPTAVN+ A
Sbjct: 60 AAYGMYLGA-RAIQTQNR------------DEFLHQLEEVAVMLRATRPTAVNLFWAIAR 106
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V ++ L+Q +++ +D+ +AIG G + L P KLN+L
Sbjct: 107 MLKTAYE--TLGSVAEIQQALLQTAQTINAEDLQTCQAIGDRGLEVLPS-TP--EKLNIL 161
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA YGTALGV+R ++ Y ETRP QGA+
Sbjct: 162 THCNAGALATAGYGTALGVVRCAWAKGRLARVYADETRPRLQGAK 206
>gi|302390332|ref|YP_003826153.1| methylthioribose-1-phosphate isomerase [Thermosediminibacter oceani
DSM 16646]
gi|302200960|gb|ADL08530.1| methylthioribose-1-phosphate isomerase [Thermosediminibacter oceani
DSM 16646]
Length = 351
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 148 KQFPDND--SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
++ PD D S KYV EK DYL S+RPTAVN+ A ++ + + ++ PV+ ++ +
Sbjct: 67 REAPDTDFESFWKYVKEKSDYLASSRPTAVNLFWALSRMEKKVLD-SRHLPVSEIRRLVR 125
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ E++ +D + IG G L D VLTHCN G LATA YGTA I
Sbjct: 126 EEAEAIHREDEEICRKIGEYGLTLLRD------GAGVLTHCNAGQLATARYGTATAPIYL 179
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
H + ETRP NQG+R
Sbjct: 180 AHEKGWKIRVFADETRPVNQGSR 202
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 79/195 (40%), Gaps = 47/195 (24%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L S+I++ +L +LDQ LLP K VE+ + +IK+++VRGAPAI +
Sbjct: 6 LLSLIWDGENLLMLDQRLLPGKIKYSKKTTVEEIWDSIKTLEVRGAPAIGVA--AAYGFY 63
Query: 64 IKDKQFPDNELIQLIESMLEKD-------------------------------ISDNKAI 92
++ PD + + + EK +S+ + +
Sbjct: 64 FAAREAPDTDFESFWKYVKEKSDYLASSRPTAVNLFWALSRMEKKVLDSRHLPVSEIRRL 123
Query: 93 GRNGAQALIDLNPRVSK-------------LNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
R A+A+ + + + VLTHCN G LATA YGTA I H
Sbjct: 124 VREEAEAIHREDEEICRKIGEYGLTLLRDGAGVLTHCNAGQLATARYGTATAPIYLAHEK 183
Query: 140 N-KIVDIKDKQFPDN 153
KI D+ P N
Sbjct: 184 GWKIRVFADETRPVN 198
>gi|384084568|ref|ZP_09995743.1| translation initiation factor, putative, aIF-2BI family protein
[Acidithiobacillus thiooxidans ATCC 19377]
Length = 345
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 97/221 (43%), Gaps = 63/221 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++++I +E L +LDQ LLP + + + + AI M VRGAPAI + + +
Sbjct: 6 NIRAIRWEDQQLCLLDQRLLPQQEIWLQLGDYREVAVAITQMVVRGAPAIGVTAAYAMAL 65
Query: 63 DIKD-KQFPDNE-------------------LIQLIESML-------------------- 82
+++ +QF D + L + L
Sbjct: 66 AVQEMRQFSDWQQRLAGAAAEIKAARPTAVNLAWATDRQLKLAQGERAADRAAALLLQAA 125
Query: 83 ----EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E+DI+DN+ +GR+GA L + + +LTHCNTGSLAT YGTALGVIR+
Sbjct: 126 HDLLEQDIADNQQMGRHGAALLPE------QGGILTHCNTGSLATGGYGTALGVIRAGIS 179
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
A K L+ Y E +L AR TA +++
Sbjct: 180 AGK-------------QLQVYADETRPWLQGARLTAWELQK 207
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 71/119 (59%), Gaps = 11/119 (9%)
Query: 171 RPTAVNMKRAAD-SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
RPTAVN+ A D +K + E + L+Q +LE+DI+DN+ +GR+GA A
Sbjct: 91 RPTAVNLAWATDRQLKLAQGE----RAADRAAALLLQAAHDLLEQDIADNQQMGRHGA-A 145
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L+ G+ LTHCNTGSLAT YGTALGVIR+ A K Y ETRP+ QGAR
Sbjct: 146 LLPEQGGI-----LTHCNTGSLATGGYGTALGVIRAGISAGKQLQVYADETRPWLQGAR 199
>gi|320106978|ref|YP_004182568.1| translation initiation factor, aIF-2BI family [Terriglobus
saanensis SP1PR4]
gi|319925499|gb|ADV82574.1| translation initiation factor, aIF-2BI family [Terriglobus
saanensis SP1PR4]
Length = 354
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A G ALGV RS K DI DSL K V D L RPTAVN+ A +
Sbjct: 53 SAAMGVALGVERS-----KATDI--------DSLTKEVEVMCDVLAKTRPTAVNLFWAIE 99
Query: 183 SVKSSLSEWAKA--SPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKL 240
+++ A + + ++ LI ++M +DI+ K +G GA+ L
Sbjct: 100 RMRAKYYALASQPDATIAKIQASLIDEAKTMYNEDIAACKRMGAFGAELLPKSG------ 153
Query: 241 NVLTHCNTGSLATAEYGTALGVIR-SLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT YGTALGVIR ++ KI + ETRPY QGAR
Sbjct: 154 TVLTHCNAGALATCGYGTALGVIRAAVERGAKID-VFADETRPYLQGAR 201
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 86/225 (38%), Gaps = 70/225 (31%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++ + K ++ LDQ LP V + +D I+ M VRGAPAI + +G+ +
Sbjct: 2 IPTLEWTKDGVRFLDQTKLPLEEIYVTATSYDDIATIIRDMIVRGAPAIGVSAAMGVALG 61
Query: 64 IKDKQFPD---------------------------------------------------N 72
++ + D
Sbjct: 62 VERSKATDIDSLTKEVEVMCDVLAKTRPTAVNLFWAIERMRAKYYALASQPDATIAKIQA 121
Query: 73 ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
LI ++M +DI+ K +G GA+ L P+ VLTHCN G+LAT YGTALGV
Sbjct: 122 SLIDEAKTMYNEDIAACKRMGAFGAELL----PKSG--TVLTHCNAGALATCGYGTALGV 175
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IR+ +D+ + E YL AR TA +
Sbjct: 176 IRAAVERGAKIDV-------------FADETRPYLQGARLTAWEL 207
>gi|344943152|ref|ZP_08782439.1| Methylthioribose-1-phosphate isomerase [Methylobacter tundripaludum
SV96]
gi|344260439|gb|EGW20711.1| Methylthioribose-1-phosphate isomerase [Methylobacter tundripaludum
SV96]
Length = 346
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
K + ++ + V + L ++RPTAVN+ A D +K+ L A ++ T ++
Sbjct: 71 KHYAQSNHWRQKVAADIAMLATSRPTAVNLFWALDQMKAVL-----AKQLDNPITAVLAC 125
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
E + +DI+ N +G GA D+ G V+THCN G+LAT YGTALGVIRS +
Sbjct: 126 AEKIHAEDIAANHKMGELGA----DILAGAK--GVMTHCNAGALATGGYGTALGVIRSAY 179
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+I Y ETRP+ QGAR
Sbjct: 180 QRERIN-VYAGETRPWLQGAR 199
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 91/229 (39%), Gaps = 65/229 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++Q++ + +LK+LDQ LP + + +AI M+VRGAPAI I G+ +
Sbjct: 8 TVQALQWTGDALKVLDQRQLPEKIVYDEYKDAVGVTEAIAGMRVRGAPAIGIAAAYGVAL 67
Query: 63 DIKD-----------------------------------------KQF--PDNELIQLIE 79
++ KQ P ++ E
Sbjct: 68 SVRKHYAQSNHWRQKVAADIAMLATSRPTAVNLFWALDQMKAVLAKQLDNPITAVLACAE 127
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ +DI+ N +G GA L V+THCN G+LAT YGTALGVIRS +
Sbjct: 128 KIHAEDIAANHKMGELGADIL------AGAKGVMTHCNAGALATGGYGTALGVIRSAY-- 179
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ + Y GE +L AR T + A D + ++L
Sbjct: 180 ------------QRERINVYAGETRPWLQGARLTVWEL--AQDGIPATL 214
>gi|222053491|ref|YP_002535853.1| translation initiation factor, aIF-2BI family [Geobacter daltonii
FRC-32]
gi|254813650|sp|B9LZ20.1|MTNA_GEOSF RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|221562780|gb|ACM18752.1| translation initiation factor, aIF-2BI family [Geobacter daltonii
FRC-32]
Length = 346
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+S + + D L RPTAVN+ A + +K ++E K ++ ++ L + E
Sbjct: 72 ESFSRQLTNVCDVLARTRPTAVNLFWAIERMKR-VAESNKDRDLHFIRETLKAEAIRIEE 130
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D+ +AIGR+GA + + VLTHCN G LATA YGTALGVIR+ H A K
Sbjct: 131 EDLEICRAIGRHGAPLIRE------GATVLTHCNAGGLATAGYGTALGVIRAAHEAGKNI 184
Query: 274 AAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 185 QVFADETRPWLQGAR 199
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 67/225 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
S ++I + + + ++DQ LP + + +AI+ M +RGAPAI + +G+
Sbjct: 2 SFRTIEWRDNKVVMIDQTRLPGEEVYNVYEDFQSVAEAIRGMIIRGAPAIGVAAAMGVAL 61
Query: 61 -------------------VVDIKDKQFPDN-ELIQLIESML------------------ 82
V D+ + P L IE M
Sbjct: 62 GAREIIADTYESFSRQLTNVCDVLARTRPTAVNLFWAIERMKRVAESNKDRDLHFIRETL 121
Query: 83 --------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E+D+ +AIGR+GA + + VLTHCN G LATA YGTALGVIR
Sbjct: 122 KAEAIRIEEEDLEICRAIGRHGAPLIRE------GATVLTHCNAGGLATAGYGTALGVIR 175
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ H A K +++ + E +L AR TA + +
Sbjct: 176 AAHEAGK-------------NIQVFADETRPWLQGARLTAWELMK 207
>gi|290961659|ref|YP_003492841.1| initiation factor subunit [Streptomyces scabiei 87.22]
gi|260651185|emb|CBG74306.1| putative initiation factor subunit [Streptomyces scabiei 87.22]
Length = 343
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 9/117 (7%)
Query: 172 PTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALI 231
PTAVN+ D V + E +A +++ ++ +D+ N+A+G +GA L+
Sbjct: 90 PTAVNLMVCVDRVMTRFDEGLEA---------VLEEAAAVQREDVEANRAMGAHGADWLL 140
Query: 232 DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L VLTHCNTG+LATA +GTALGV+R LH ++ Y ETRP QG+R
Sbjct: 141 KRVDVDRPLRVLTHCNTGALATAGWGTALGVVRELHARGRLDVVYADETRPLLQGSR 197
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 42/181 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR-------------- 47
+ L+++ + +SL ++DQ +LP ++ V+I V+ AI+ + VR
Sbjct: 3 QELRAVDWTGNSLALIDQTVLPQRTETVEIREVDALISAIRRLVVRGAPAIGAAGAYGVA 62
Query: 48 ---------GAP-----------------AIAIVGCLGLVVDIKDKQFPDNELIQLIESM 81
G P A+ ++ C+ V+ D+ +++ ++
Sbjct: 63 IALLQGRREGWPTEEVRAAVARVRAARPTAVNLMVCVDRVMTRFDEGL--EAVLEEAAAV 120
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+D+ N+A+G +GA L+ L VLTHCNTG+LATA +GTALGV+R LH +
Sbjct: 121 QREDVEANRAMGAHGADWLLKRVDVDRPLRVLTHCNTGALATAGWGTALGVVRELHARGR 180
Query: 142 I 142
+
Sbjct: 181 L 181
>gi|357632323|ref|ZP_09130201.1| translation initiation factor, aIF-2BI family [Desulfovibrio sp.
FW1012B]
gi|357580877|gb|EHJ46210.1| translation initiation factor, aIF-2BI family [Desulfovibrio sp.
FW1012B]
Length = 350
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 73/127 (57%), Gaps = 11/127 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEW-AKASP-VNTVKTRLIQLIESMLEKDISDNKA 221
L L ARPTAVN++ A ++ +W A + P ++ + + + + M +DI NKA
Sbjct: 85 LTELEEARPTAVNLRWAVSRLRG---QWQAMSDPSLDALASAWLCTAQDMHAEDIEINKA 141
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+G+NGA + D + V+THCN G+LATA YGTALGVIR+ K ETR
Sbjct: 142 MGKNGADCIADGD------TVMTHCNAGALATAGYGTALGVIRAAFEQGKRIRVIANETR 195
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 196 PFLQGAR 202
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 56/176 (31%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG---------- 59
++H+L +LDQ LP + N D A+++M VRGAPAI + G
Sbjct: 10 DRHALILLDQRFLPDREEYFVCRNTADTVYALQTMVVRGAPAIGVTAAYGCYLAAREAAE 69
Query: 60 --------------LVVDIKDKQ-------------------FPDNELIQLIESML---- 82
L+ ++++ + D L L + L
Sbjct: 70 AAASDGAWKDRLAALLTELEEARPTAVNLRWAVSRLRGQWQAMSDPSLDALASAWLCTAQ 129
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+DI NKA+G+NGA + D + V+THCN G+LATA YGTALGVIR+
Sbjct: 130 DMHAEDIEINKAMGKNGADCIADGD------TVMTHCNAGALATAGYGTALGVIRA 179
>gi|404494926|ref|YP_006719032.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
metallireducens GS-15]
gi|418067580|ref|ZP_12704919.1| translation initiation factor, aIF-2BI family [Geobacter
metallireducens RCH3]
gi|123573002|sp|Q39ZK3.1|MTNA_GEOMG RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|78192554|gb|ABB30321.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
metallireducens GS-15]
gi|373558578|gb|EHP84914.1| translation initiation factor, aIF-2BI family [Geobacter
metallireducens RCH3]
Length = 346
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 75/144 (52%), Gaps = 23/144 (15%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVN-------MKR-AADSVKSSLSEWAKASPVNTVKTRL 204
++S + + D L RPTAVN MKR AAD+ SL E + ++
Sbjct: 71 HESFLRQLDNVCDVLARTRPTAVNLFWAIERMKRVAADNCGGSLDEVREVLKAEAIRIE- 129
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
E+D++ KAIGR+GA L P VLTHCN G LATA YGTALGVIR
Sbjct: 130 --------EEDLALCKAIGRHGA----GLIP--EGATVLTHCNAGGLATAGYGTALGVIR 175
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
+ H A K + ETRP+ QGAR
Sbjct: 176 AAHEAGKNIQVFADETRPWLQGAR 199
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 67/225 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
S ++I + + ++DQ LP + + + +AI+ M +RGAPAI + +G+
Sbjct: 2 SFRTIEWRDDKVIMIDQTRLPGEEVYCEYGDYKSVAEAIRGMIIRGAPAIGVAAAMGVAL 61
Query: 61 -------------------VVDIKDKQFPDN-ELIQLIESML------------------ 82
V D+ + P L IE M
Sbjct: 62 GAREIIADTHESFLRQLDNVCDVLARTRPTAVNLFWAIERMKRVAADNCGGSLDEVREVL 121
Query: 83 --------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E+D++ KAIGR+GA L P + VLTHCN G LATA YGTALGVIR
Sbjct: 122 KAEAIRIEEEDLALCKAIGRHGA----GLIPEGA--TVLTHCNAGGLATAGYGTALGVIR 175
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ H A K +++ + E +L AR TA + +
Sbjct: 176 AAHEAGK-------------NIQVFADETRPWLQGARLTAWELMK 207
>gi|218441586|ref|YP_002379915.1| methylthioribose-1-phosphate isomerase [Cyanothece sp. PCC 7424]
gi|218174314|gb|ACK73047.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
7424]
Length = 350
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG A +I K ++F K + E L RPTAVN+ A
Sbjct: 60 AAYGMYLG-------AKEIETDKREEF------LKKLEEVAQLLKQTRPTAVNLFWAISR 106
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V +KT L++ + + ++D+ +AIG NG L P +L +L
Sbjct: 107 MLKTAYE--TIGTVAEIKTILLKTAQKIQQEDLQTCQAIGENGLSVL-PTEP--DQLRIL 161
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTG LATA YGTALGVIRS + ++ Y ETRP QGA+
Sbjct: 162 THCNTGGLATAGYGTALGVIRSAWQSGRLLRVYADETRPRLQGAK 206
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 50/189 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I+E+ + ++DQ LP+ +V+I D +AIK+M VRGAPAI + G+ +
Sbjct: 8 IYPVIWEQDKVLLIDQTRLPNEYSIVEITRSSDMARAIKTMIVRGAPAIGVAAAYGMYLG 67
Query: 64 IKDKQFPDNE----------------------LIQLIESML------------------- 82
K+ + E L I ML
Sbjct: 68 AKEIETDKREEFLKKLEEVAQLLKQTRPTAVNLFWAISRMLKTAYETIGTVAEIKTILLK 127
Query: 83 ------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
++D+ +AIG NG L L +L +LTHCNTG LATA YGTALGVIRS
Sbjct: 128 TAQKIQQEDLQTCQAIGENG---LSVLPTEPDQLRILTHCNTGGLATAGYGTALGVIRSA 184
Query: 137 HGANKIVDI 145
+ +++ +
Sbjct: 185 WQSGRLLRV 193
>gi|328952430|ref|YP_004369764.1| methylthioribose-1-phosphate isomerase [Desulfobacca acetoxidans
DSM 11109]
gi|328452754|gb|AEB08583.1| Methylthioribose-1-phosphate isomerase [Desulfobacca acetoxidans
DSM 11109]
Length = 350
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 149 QFP--DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP-VNTVKTRLI 205
+FP D D ++ + + +ARPTAVN+ A + + S ++ A P + +KTRL+
Sbjct: 69 RFPHTDIDGFRRHFRDVCQVIGTARPTAVNLTWALERMMSLVA--ANVHPDSSALKTRLV 126
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+++L++DI+ N+ IG G + + D + VLTHCN G LAT YGTA+GVIR+
Sbjct: 127 AEAKAILQEDIAINRQIGVLGQELIHDGD------TVLTHCNAGGLATGGYGTAVGVIRA 180
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
A K ETRP QGAR
Sbjct: 181 AWEAGKKIHVLVDETRPILQGAR 203
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
L+ +++L++DI+ N+ IG G + + D + VLTHCN G LAT YGTA+G
Sbjct: 123 TRLVAEAKAILQEDIAINRQIGVLGQELIHDGD------TVLTHCNAGGLATGGYGTAVG 176
Query: 132 VIRSLHGANKIVDI 145
VIR+ A K + +
Sbjct: 177 VIRAAWEAGKKIHV 190
>gi|434407502|ref|YP_007150387.1| methylthioribose-1-phosphate isomerase [Cylindrospermum stagnale
PCC 7417]
gi|428261757|gb|AFZ27707.1| methylthioribose-1-phosphate isomerase [Cylindrospermum stagnale
PCC 7417]
Length = 353
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
GA +I ++F DN LEK + L S RPTAVN+ A + + E V
Sbjct: 67 GAREIETSDRREFLDN--LEKVA----ELLRSTRPTAVNLFWAIGRMMKTAYE--SLGTV 118
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
+K L+Q +++ +D+ +AIG G AL P KL +LTHCN G+LATA YG
Sbjct: 119 AEIKQTLLQTAQAINTEDLQTCQAIGDRGLAALPK-TP--EKLTILTHCNAGALATAGYG 175
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGV+RS ++ + ETRP QGA+
Sbjct: 176 TALGVVRSAWREGRLMRVFADETRPRLQGAK 206
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 52/177 (29%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ +S+ ++DQ LP+ V+I+ +D AIK+M VRGAPAI + G+ + ++
Sbjct: 11 VIWHNNSVSLIDQTRLPNEYSFVEIHRSDDMALAIKTMIVRGAPAIGVAAAYGMYLGARE 70
Query: 67 ------KQFPDN-----------------------------------------ELIQLIE 79
++F DN L+Q +
Sbjct: 71 IETSDRREFLDNLEKVAELLRSTRPTAVNLFWAIGRMMKTAYESLGTVAEIKQTLLQTAQ 130
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ +AIG G AL P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 131 AINTEDLQTCQAIGDRGLAAL----PKTPEKLTILTHCNAGALATAGYGTALGVVRS 183
>gi|392570153|gb|EIW63326.1| eukaryotic translation initiation factor 2B [Trametes versicolor
FP-101664 SS1]
Length = 386
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 83/140 (59%), Gaps = 7/140 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA--SPVNTVKTRLIQLIESML 212
+L+++V L +L +ARPTAVN+ A + +L A +P+ V LI +
Sbjct: 82 ALKEHVEGVLAHLYTARPTAVNLGAATRRLTKTLQAAIDAGRNPLE-VAQDLITEAREID 140
Query: 213 EKDISDNKAIGRNGAQALIDLNPG----VSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+D+ N+ + + G + L++ G ++LNV+T CNTGSLAT+ YGTALG+I LH
Sbjct: 141 AEDVGRNRQMSKWGGEWLVERVKGDGGSGAELNVMTVCNTGSLATSGYGTALGLITYLHE 200
Query: 269 ANKIGAAYCTETRPYNQGAR 288
K+ A+ T++ PY+QG+R
Sbjct: 201 TGKLQRAFFTQSTPYHQGSR 220
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L SI L+I+DQLLLPH+++ ++I N++DA+ AIKSM++RGAPAIA + L +
Sbjct: 1 MPALTSIRTSAGKLEIVDQLLLPHSTEFIEIRNIDDAFDAIKSMKIRGAPAIASLAALAV 60
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRV-------SKLNVLTHCNTGSLATA 124
+LI + +D+ N+ + + G + L++ RV ++LNV+T CNTGSLAT+
Sbjct: 130 QDLITEAREIDAEDVGRNRQMSKWGGEWLVE---RVKGDGGSGAELNVMTVCNTGSLATS 186
Query: 125 EYGTALGVIRSLHGANKI 142
YGTALG+I LH K+
Sbjct: 187 GYGTALGLITYLHETGKL 204
>gi|157362934|ref|YP_001469701.1| aIF-2BI family translation initiation factor [Thermotoga lettingae
TMO]
gi|218526581|sp|A8F3A3.1|MTNA1_THELT RecName: Full=Methylthioribose-1-phosphate isomerase 1; Short=M1Pi
1; Short=MTR-1-P isomerase 1; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 1
gi|157313538|gb|ABV32637.1| putative translation initiation factor, aIF-2BI family [Thermotoga
lettingae TMO]
Length = 346
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 87/167 (52%), Gaps = 22/167 (13%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA +G LG A + +K++ F D + D L S RPTAVN+ A
Sbjct: 55 ATAAFGYVLG-------AKEAATLKNQNFID------VMKNVYDVLASTRPTAVNLFWAL 101
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ ++ + + +KA V+ + L + + E+DI NK IG +G L D
Sbjct: 102 NRMEKCV-DLSKA--VDEILEDLEKEAIKIAEEDIRINKTIGTHGQTLLKD------GCA 152
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT +YGTALGVIR+ + K Y ETRPY QGAR
Sbjct: 153 VLTHCNAGALATVDYGTALGVIRAAVESGKKIKVYVDETRPYLQGAR 199
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 92/215 (42%), Gaps = 65/215 (30%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------ 62
+ +SL ++DQ LPH V+ + + +AIK M VRGAPAI G V+
Sbjct: 10 WTGNSLILVDQRKLPHVVNYVECKSYAEVARAIKDMVVRGAPAIGATAAFGYVLGAKEAA 69
Query: 63 DIKDKQFPD------------------------------------NELIQLIES----ML 82
+K++ F D +E+++ +E +
Sbjct: 70 TLKNQNFIDVMKNVYDVLASTRPTAVNLFWALNRMEKCVDLSKAVDEILEDLEKEAIKIA 129
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E+DI NK IG +G L D VLTHCN G+LAT +YGTALGVIR+ + K
Sbjct: 130 EEDIRINKTIGTHGQTLLKD------GCAVLTHCNAGALATVDYGTALGVIRAAVESGKK 183
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ + YV E YL AR TA +
Sbjct: 184 IKV-------------YVDETRPYLQGARLTAWEL 205
>gi|365873618|ref|ZP_09413151.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermanaerovibrio
velox DSM 12556]
gi|363983705|gb|EHM09912.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermanaerovibrio
velox DSM 12556]
Length = 339
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A D ++S P + +++ S+ E+D+ NKAIG NG
Sbjct: 77 LWATRPTAVNLFWALDRMRS-----IAGLPPDIRGDAMLKEALSIWEEDLRINKAIGANG 131
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L + + V+THCNTGSLAT YGTALGVIR+ A K + ETRP QG
Sbjct: 132 SVLLPE------RAKVITHCNTGSLATGGYGTALGVIRAAVEAGKDVEVFVDETRPRFQG 185
Query: 287 AR 288
AR
Sbjct: 186 AR 187
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 41/174 (23%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-- 64
+ E+ +L+ILDQ L+P + + + AI SM VRGAPAI I G+ +D
Sbjct: 7 FLREETALEILDQRLIPFQVSYLKCTSADQVASAIVSMAVRGAPAIGIAAAFGVALDALA 66
Query: 65 -KDKQF-----------------------------PD---NELIQLIESMLEKDISDNKA 91
+D + PD + +++ S+ E+D+ NKA
Sbjct: 67 GRDVERAIRILWATRPTAVNLFWALDRMRSIAGLPPDIRGDAMLKEALSIWEEDLRINKA 126
Query: 92 IGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
IG NG+ L + + V+THCNTGSLAT YGTALGVIR+ A K V++
Sbjct: 127 IGANGSVLLPE------RAKVITHCNTGSLATGGYGTALGVIRAAVEAGKDVEV 174
>gi|356960073|ref|ZP_09063055.1| translation initiation factor, aIF-2BI family protein [gamma
proteobacterium SCGC AAA001-B15]
Length = 348
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 8/133 (6%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
K + + L L +RPTAVN+ A + +++ +++ + SP LI+ E +L++D
Sbjct: 77 FSKGMKKALKLLAESRPTAVNLFWAINRMRNLMNQ-TQGSPSEIANVLLIEAHE-ILKED 134
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
I N+ +G GA L+D VLTHCN G+LATA +GTALGVIRS + K +
Sbjct: 135 IQINRTMGSFGADLLVD------GARVLTHCNAGALATAGHGTALGVIRSAVQSGKNISV 188
Query: 276 YCTETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 189 LADETRPFLQGAR 201
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 53/179 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + + L+++DQ +LP + + + I+SM VRGAPAI G+ ++
Sbjct: 6 IETLKWVEDHLEMIDQRILPADFQYISYYSASSVADGIRSMVVRGAPAIGCAAAYGIALE 65
Query: 64 -------------------------------------------IKDKQFPDNEL--IQLI 78
+ Q +E+ + LI
Sbjct: 66 ALNLRDLNVTEFSKGMKKALKLLAESRPTAVNLFWAINRMRNLMNQTQGSPSEIANVLLI 125
Query: 79 ES--MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+ +L++DI N+ +G GA L+D VLTHCN G+LATA +GTALGVIRS
Sbjct: 126 EAHEILKEDIQINRTMGSFGADLLVD------GARVLTHCNAGALATAGHGTALGVIRS 178
>gi|158338289|ref|YP_001519466.1| methylthioribose-1-phosphate isomerase [Acaryochloris marina
MBIC11017]
gi|218526586|sp|B0C8J2.1|MTNA_ACAM1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|158308530|gb|ABW30147.1| translation initiation factor IF-2B alpha subunit [Acaryochloris
marina MBIC11017]
Length = 355
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A D + + P++ ++ +L+ + + D+ KAIG
Sbjct: 89 DTLKATRPTAVNLFWAVDRMLKVARQ--TLGPISQIQDQLLTTAQEIGADDVRTCKAIGD 146
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G L +P KL +LTHCN G+LATA YGTALGV+RS A ++ Y ETRP
Sbjct: 147 HGLSVLPK-DP--EKLCLLTHCNAGALATAGYGTALGVVRSAWTAGRLARVYADETRPRL 203
Query: 285 QGAR 288
QGA+
Sbjct: 204 QGAK 207
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---- 62
+++ ++++DQ LP +V+I ED AIK+M VRGAPAI + G+ +
Sbjct: 12 VVWRGDHVELIDQTRLPQQFSVVEIRRSEDMATAIKTMIVRGAPAIGVAAAYGMYLGSCE 71
Query: 63 ---DIKDKQFPD----------------------------------------NELIQLIE 79
D +D + ++L+ +
Sbjct: 72 VTTDNRDGFLSELAGVGDTLKATRPTAVNLFWAVDRMLKVARQTLGPISQIQDQLLTTAQ 131
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ D+ KAIG +G L +P KL +LTHCN G+LATA YGTALGV+RS A
Sbjct: 132 EIGADDVRTCKAIGDHGLSVLPK-DPE--KLCLLTHCNAGALATAGYGTALGVVRSAWTA 188
Query: 140 NKIVDI 145
++ +
Sbjct: 189 GRLARV 194
>gi|327398965|ref|YP_004339834.1| translation initiation factor, aIF-2BI family [Hippea maritima DSM
10411]
gi|327181594|gb|AEA33775.1| translation initiation factor, aIF-2BI family [Hippea maritima DSM
10411]
Length = 342
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 6/141 (4%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL 207
++ D L ++ L RPTAVN+ A D +K+ + + PV + +L
Sbjct: 69 RECASKDELLGRFNSAVECLSKTRPTAVNLFYALDRMKAVVEDKIDILPVYKLIKKLRAT 128
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
++ E+ ++ IG+ GA L K +LTHCNTGSLAT GTALG+I+++H
Sbjct: 129 AFTIWEEQKQQDEKIGQFGANFL------KGKRRILTHCNTGSLATGGIGTALGIIKTMH 182
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ Y ETRPY QGAR
Sbjct: 183 RNGMLDIVYVDETRPYLQGAR 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 82/203 (40%), Gaps = 66/203 (32%)
Query: 23 PHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---------------------- 60
P V +V+ +AIK M VRGAP I IV G+
Sbjct: 27 PKEKLYVKARDVDSVCKAIKDMIVRGAPLIGIVAAFGVYLGVRECASKDELLGRFNSAVE 86
Query: 61 ---------------------VVDIKDKQFPDNELIQLIE----SMLEKDISDNKAIGRN 95
VV+ K P +LI+ + ++ E+ ++ IG+
Sbjct: 87 CLSKTRPTAVNLFYALDRMKAVVEDKIDILPVYKLIKKLRATAFTIWEEQKQQDEKIGQF 146
Query: 96 GAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDS 155
GA L K +LTHCNTGSLAT GTALG+I+++H N ++DI
Sbjct: 147 GANFL------KGKRRILTHCNTGSLATGGIGTALGIIKTMH-RNGMLDI---------- 189
Query: 156 LEKYVGEKLDYLVSARPTAVNMK 178
YV E YL AR TA +K
Sbjct: 190 --VYVDETRPYLQGARLTAFELK 210
>gi|254522088|ref|ZP_05134143.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas sp. SKA14]
gi|219719679|gb|EED38204.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas sp. SKA14]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D Q D + + L L ++RPTAVN+ A ++ LS A P K L
Sbjct: 76 RDVQAADGVQALQQLEPALQRLNASRPTAVNLAWALARMRRCLS---AAGP--DWKVLLA 130
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+++ E+D++ N+ +G GA LID GV LTHCNTGSLATA +GTALGVIR+
Sbjct: 131 AEAQAIAEEDLAANRHMGALGA-GLIDAGSGV-----LTHCNTGSLATAGFGTALGVIRA 184
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++I + ETRP+ QGAR
Sbjct: 185 GMAQHRIARVFAGETRPWLQGAR 207
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 113/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ +D AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDDVATAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
+D Q D + +Q +E L++
Sbjct: 75 ARDVQAADGVQALQQLEPALQRLNASRPTAVNLAWALARMRRCLSAAGPDWKVLLAAEAQ 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA LID VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIDAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|443323741|ref|ZP_21052744.1| S-methyl-5-thioribose-1-phosphate isomerase [Gloeocapsa sp. PCC
73106]
gi|442786527|gb|ELR96257.1| S-methyl-5-thioribose-1-phosphate isomerase [Gloeocapsa sp. PCC
73106]
Length = 349
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 50/192 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
++S+ S+++ + ++++DQ LP +V+I+ ED AIK+M VRGAPAI + GL
Sbjct: 5 VQSIYSVVWYQDKVRLVDQTRLPGEYNIVEISRWEDMAIAIKTMIVRGAPAIGVAAAYGL 64
Query: 61 VV----------------------DIKDKQFPDNELIQLIESMLE--------------- 83
+ +++ + L I ML+
Sbjct: 65 YLGAREIKTGKRSLFLAELEKVAQSLRETRPTAVNLFWAIARMLQIAYETMGDVPTIKEA 124
Query: 84 ----------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+DI+ +AIG++G L R LN++THCNTG+LATA YGTALGVI
Sbjct: 125 LLLTAQNIQAEDIATCEAIGKHGLSVLPTTPER---LNIITHCNTGALATAGYGTALGVI 181
Query: 134 RSLHGANKIVDI 145
R ++++ +
Sbjct: 182 REAWKSDRLARV 193
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A + E V T+K L+ +++ +DI+ +AIG++G
Sbjct: 90 LRETRPTAVNLFWAIARMLQIAYE--TMGDVPTIKEALLLTAQNIQAEDIATCEAIGKHG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L P +LN++THCNTG+LATA YGTALGVIR ++++ Y ETRP QG
Sbjct: 148 LSVL-PTTP--ERLNIITHCNTGALATAGYGTALGVIREAWKSDRLARVYADETRPRLQG 204
Query: 287 AR 288
A+
Sbjct: 205 AK 206
>gi|73668574|ref|YP_304589.1| translation initiation factor IF-2B subunit alpha [Methanosarcina
barkeri str. Fusaro]
gi|72395736|gb|AAZ70009.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanosarcina barkeri str. Fusaro]
Length = 362
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ D V ++S+ A V V+ +Q + E+D++ NK IG +G
Sbjct: 108 LKSTRPTAVNLSWGVDRVLKAVSD---AFDVQRVREIALQEARDIAEEDVTTNKLIGESG 164
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D + +LTHCN G LA ++GTALGV+RS K ETRP NQG
Sbjct: 165 TKLLKDGD------TILTHCNAGRLACVDWGTALGVVRSAIAEGKEIKVIACETRPLNQG 218
Query: 287 AR 288
+R
Sbjct: 219 SR 220
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 52/172 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR--------------------GA 49
E +S+ ++DQ LLP ++++ + +AIK ++VR GA
Sbjct: 32 ESNSVVLVDQTLLPKEYRIIECKTLSSLCEAIKFLRVRGAPALGAAGGFGIALAAFLSGA 91
Query: 50 PAIAIV--------------------------GCLGLVVDIKDKQFPDNELIQLIESMLE 83
+ L V D D Q +Q + E
Sbjct: 92 RDFETIIRDLKVAGKTLKSTRPTAVNLSWGVDRVLKAVSDAFDVQRVREIALQEARDIAE 151
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D++ NK IG +G + L D + +LTHCN G LA ++GTALGV+RS
Sbjct: 152 EDVTTNKLIGESGTKLLKDGD------TILTHCNAGRLACVDWGTALGVVRS 197
>gi|392403712|ref|YP_006440324.1| Methylthioribose-1-phosphate isomerase [Turneriella parva DSM
21527]
gi|390611666|gb|AFM12818.1| Methylthioribose-1-phosphate isomerase [Turneriella parva DSM
21527]
Length = 346
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK--DISDNKA--- 221
L +ARPTAVN+ A + + + + P + K ++L+ ++ EK +I ++ A
Sbjct: 87 LDAARPTAVNLMWATEQMLQVATPFFAGEP-SKAKDAHLKLLLALYEKALEIHNDDAERC 145
Query: 222 --IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ N + L+ P K N+LTHCNTGSLAT GTALG IR LH +KI Y E
Sbjct: 146 LKMSNNAVKYLLTKYPK-EKYNILTHCNTGSLATGGIGTALGAIRVLHEKSKINMVYADE 204
Query: 280 TRPYNQGAR 288
TRPY QG+R
Sbjct: 205 TRPYLQGSR 213
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 17/107 (15%)
Query: 74 LIQLIESMLEKDISDNK---AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
L+ L E LE D + + N + L+ P+ K N+LTHCNTGSLAT GTAL
Sbjct: 127 LLALYEKALEIHNDDAERCLKMSNNAVKYLLTKYPK-EKYNILTHCNTGSLATGGIGTAL 185
Query: 131 GVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
G IR LH +KI + Y E YL +R TA +
Sbjct: 186 GAIRVLHEKSKINMV-------------YADETRPYLQGSRLTAFEL 219
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+ +++L+Q LLPH V +N D +AIK M VRGAPAI I G+
Sbjct: 12 RDKIQLLNQKLLPHKLDYVVCSNGADVAKAIKDMVVRGAPAIGISAAYGM 61
>gi|374622998|ref|ZP_09695516.1| translation initiation factor, aIF-2BI family protein
[Ectothiorhodospira sp. PHS-1]
gi|373942117|gb|EHQ52662.1| translation initiation factor, aIF-2BI family protein
[Ectothiorhodospira sp. PHS-1]
Length = 351
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 72/125 (57%), Gaps = 9/125 (7%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
LD L ++RPTAVN+ A ++ + V+ L++ E + DI N+ +G
Sbjct: 88 LDTLAASRPTAVNLFWALAHMRRLMDRLPDG--VDPTGELLLE-AERIHHDDIEGNRRMG 144
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALID PG + VLTHCNTGSLAT YGTALGVIRS + I + ETRP+
Sbjct: 145 ELGA-ALID--PGRA---VLTHCNTGSLATGGYGTALGVIRSAYAKGLIPHVFADETRPW 198
Query: 284 NQGAR 288
QGAR
Sbjct: 199 LQGAR 203
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 96/232 (41%), Gaps = 67/232 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S++++ + L++LDQ LPH S +D++ +A AI+ M VRGAPAI + +V+
Sbjct: 8 SIRAVQWTGTHLRLLDQRRLPHESVYLDMDTAPEAAVAIRDMVVRGAPAIGVTAAYAVVL 67
Query: 63 DIK----------------------------------------------DKQFPDNELIQ 76
+ D P EL+
Sbjct: 68 SARQAWSRDPSHWRDAMQADLDTLAASRPTAVNLFWALAHMRRLMDRLPDGVDPTGELLL 127
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E + DI N+ +G GA ALID VLTHCNTGSLAT YGTALGVIRS
Sbjct: 128 EAERIHHDDIEGNRRMGELGA-ALID-----PGRAVLTHCNTGSLATGGYGTALGVIRSA 181
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
+ I + + E +L AR TA + + D + SL
Sbjct: 182 YAKGLIPHV-------------FADETRPWLQGARLTAWELVQ--DGIPVSL 218
>gi|383784638|ref|YP_005469208.1| methylthioribose-1-phosphate isomerase [Leptospirillum ferrooxidans
C2-3]
gi|383083551|dbj|BAM07078.1| putative methylthioribose-1-phosphate isomerase [Leptospirillum
ferrooxidans C2-3]
Length = 356
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 72/120 (60%), Gaps = 9/120 (7%)
Query: 171 RPTAVNMKRAADSVKSSLSE-WAKA-SPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
RPTAVN+ A D +++ S+ +AK +P+ + L S+ E+DIS N+++G+ G +
Sbjct: 94 RPTAVNLFWAIDRMRTLWSDLYAKGLTPLEITRV-LYDEARSVHEEDISQNRSMGKFGQE 152
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ +VLTHCN G+LAT YGTALGVIR+ A K + ETRPY QGAR
Sbjct: 153 LFPESG------SVLTHCNAGALATGGYGTALGVIRAAVEAGKKIHVFADETRPYLQGAR 206
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 21/109 (19%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
S+ E+DIS N+++G+ G + L P +VLTHCN G+LAT YGTALGVIR+ A
Sbjct: 134 SVHEEDISQNRSMGKFGQE----LFPESG--SVLTHCNAGALATGGYGTALGVIRAAVEA 187
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
K + + + E YL AR TA + AD++ ++L
Sbjct: 188 GKKIHV-------------FADETRPYLQGARLTAYEL--MADNIPTTL 221
>gi|325922434|ref|ZP_08184202.1| methylthioribose-1-phosphate isomerase [Xanthomonas gardneri ATCC
19865]
gi|325547091|gb|EGD18177.1| methylthioribose-1-phosphate isomerase [Xanthomonas gardneri ATCC
19865]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAGADWRAVIAREAQAIA---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +IG + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRIGKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V + + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCESSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL----------------IESMLEKDISDNKAIGRNGAQ 98
++ D L++L + +L +D +A+ AQ
Sbjct: 75 AREIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWRAVIAREAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 135 AIADEDLAANRHMGALGAALIAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIGKV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +K+ L+
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKSGLV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|344207996|ref|YP_004793137.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia JV3]
gi|343779358|gb|AEM51911.1| Methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia JV3]
Length = 354
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 74/129 (57%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L ++RPTAVN+ A ++ L ++W K L +++ E+D++ N
Sbjct: 94 LQRLNASRPTAVNLAWALARMRRCLNAAGADW---------KALLESEAQAIAEEDLAAN 144
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA LID GV LTHCNTGSLATA +GTALGVIR+ ++I + E
Sbjct: 145 RHMGALGA-GLIDAGSGV-----LTHCNTGSLATAGFGTALGVIRAGMAQHRIARVFAGE 198
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 199 TRPWLQGAR 207
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDEVASAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESML---------------------------------------- 82
+ Q D +Q +E L
Sbjct: 75 ARAVQAVDGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADWKALLESEAQ 134
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
E+D++ N+ +G GA LID VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIDAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|56752113|ref|YP_172814.1| translation initiation factor eIF-2B subunit alpha [Synechococcus
elongatus PCC 6301]
gi|81300801|ref|YP_401009.1| translation initiation factor 2B subunit I [Synechococcus elongatus
PCC 7942]
gi|81561512|sp|Q5N076.1|MTNA_SYNP6 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|123556504|sp|Q31LP7.1|MTNA_SYNE7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|56687072|dbj|BAD80294.1| probable translation initiation factor eIF-2B alpha subunit
[Synechococcus elongatus PCC 6301]
gi|81169682|gb|ABB58022.1| translation initiation factor 2B subunit I family (IF-2BI)
[Synechococcus elongatus PCC 7942]
Length = 348
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 78/139 (56%), Gaps = 14/139 (10%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP---VNTVKTRLIQLI 208
D+ L + + L +ARPTAVN+ A D + +++ A+P + L+
Sbjct: 71 DSADLRAQLAIAAETLKAARPTAVNLAWAVDRMLAAI-----ANPDLEAAAIHATLLAAA 125
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ + ++D++ N+ IG N AQALI + NV+ HCNTG+LAT +YGTALG+IR H
Sbjct: 126 QQLYDEDVAVNRQIGLN-AQALIP-----QQANVIHHCNTGALATVDYGTALGIIRIAHE 179
Query: 269 ANKIGAAYCTETRPYNQGA 287
K AY ETRP QGA
Sbjct: 180 QGKQIHAYLDETRPRLQGA 198
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 53/188 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M QS+++ L++LDQ LP ++ + QAI+ M VRGAPAI + GL
Sbjct: 1 MSPFQSLLWTGSQLRLLDQRSLPQETQYRYYDTAAGVAQAIQDMVVRGAPAIGVAAAFGL 60
Query: 61 VV-----------DIK------------------------DKQF-----PDNE------- 73
V+ D++ D+ PD E
Sbjct: 61 VLTSQQSAMTDSADLRAQLAIAAETLKAARPTAVNLAWAVDRMLAAIANPDLEAAAIHAT 120
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L+ + + ++D++ N+ IG N AQALI + NV+ HCNTG+LAT +YGTALG+I
Sbjct: 121 LLAAAQQLYDEDVAVNRQIGLN-AQALIP-----QQANVIHHCNTGALATVDYGTALGII 174
Query: 134 RSLHGANK 141
R H K
Sbjct: 175 RIAHEQGK 182
>gi|315924917|ref|ZP_07921134.1| S-methyl-5-thioribose-1-phosphate isomerase [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621816|gb|EFV01780.1| S-methyl-5-thioribose-1-phosphate isomerase [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 342
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN 198
A V + ++F + + + D L RPTAVN+ A D ++ L A
Sbjct: 53 AGYAVALAAREFAGRPDFAERMQQACDDLRGTRPTAVNLFWAVDRQEACLKAALTAGQDA 112
Query: 199 TVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGT 258
V R +++ +DI+ +A+GR GA AL+ L VLTHCN G+LATA+YGT
Sbjct: 113 YVALR--AEADAICAEDIAMCRAMGRAGA-ALLHLGD-----TVLTHCNAGALATADYGT 164
Query: 259 ALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
ALGVIR+ A K + Y ETRP QGAR
Sbjct: 165 ALGVIRAACEAGKQISVYADETRPLLQGAR 194
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 55/189 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ + +E +LK++DQ LLP + + D AI +M VRGAPAI + G V
Sbjct: 1 MRPVYFEDEALKLIDQTLLPTREVIRSYTDYRDVCDAIVTMVVRGAPAIGVTA--GYAVA 58
Query: 64 IKDKQF---PD-NELIQLI----------------------------------------- 78
+ ++F PD E +Q
Sbjct: 59 LAAREFAGRPDFAERMQQACDDLRGTRPTAVNLFWAVDRQEACLKAALTAGQDAYVALRA 118
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+++ +DI+ +A+GR GA AL+ L VLTHCN G+LATA+YGTALGVIR+
Sbjct: 119 EADAICAEDIAMCRAMGRAGA-ALLHLGD-----TVLTHCNAGALATADYGTALGVIRAA 172
Query: 137 HGANKIVDI 145
A K + +
Sbjct: 173 CEAGKQISV 181
>gi|118578949|ref|YP_900199.1| aIF-2BI family translation initiation factor [Pelobacter
propionicus DSM 2379]
gi|218526921|sp|A1ALC1.1|MTNA_PELPD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|118501659|gb|ABK98141.1| methylthioribose-1-phosphate isomerase [Pelobacter propionicus DSM
2379]
Length = 346
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 77/136 (56%), Gaps = 7/136 (5%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
++S + + D + RPTAVN+ A + +K ++E + P++ ++ L + +
Sbjct: 71 HESFFRQLENVCDVMARTRPTAVNLFWAIERMKR-VAEAGRDKPLDGIRQLLKEEAIRVE 129
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
E+D++ + IG+ GA + + VLTHCN G LATA YGTALGVIR+ H A K
Sbjct: 130 EEDLTICRNIGKWGATLIPE------GATVLTHCNAGGLATAGYGTALGVIRAAHEAGKK 183
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 184 IQVFADETRPWLQGAR 199
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 89/223 (39%), Gaps = 67/223 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-- 60
S ++I + S+ ++DQ LP + + +AI+ M +RGAPAI + +G+
Sbjct: 2 SFRTIEWRDDSVIMIDQTRLPGEEVYNTYTDFKAVAEAIRGMVIRGAPAIGVAAAMGIAL 61
Query: 61 -------------------VVDIKDKQFPDN-ELIQLIESML------------------ 82
V D+ + P L IE M
Sbjct: 62 GARDIIADTHESFFRQLENVCDVMARTRPTAVNLFWAIERMKRVAEAGRDKPLDGIRQLL 121
Query: 83 --------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E+D++ + IG+ GA + + VLTHCN G LATA YGTALGVIR
Sbjct: 122 KEEAIRVEEEDLTICRNIGKWGATLIPE------GATVLTHCNAGGLATAGYGTALGVIR 175
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ H A K + + F D E +L AR TA +
Sbjct: 176 AAHEAGKKIQV----FAD---------ETRPWLQGARLTAWEL 205
>gi|404253590|ref|ZP_10957558.1| methylthioribose-1-phosphate isomerase [Sphingomonas sp. PAMC
26621]
Length = 355
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 79/145 (54%), Gaps = 22/145 (15%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK---SSLSEWAKASPVNTVKTRLIQL 207
P ++SL++ D LVS RPTAVN++ A D V+ + L E +A+ +
Sbjct: 74 PGDESLDR----AFDRLVSTRPTAVNLRWALDRVRGVVTRLPERDRAA---------VAY 120
Query: 208 IE--SMLEKDISDNKAIGRNG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
+E ++ + D+ N AIGR G Q+L++ NPG +N+LTHCN G LAT ++GTA
Sbjct: 121 VEAGAICDADVEVNAAIGRAGLEILQSLVEANPG-RAINILTHCNAGWLATVDWGTATAP 179
Query: 263 IRSLHGANKIGAAYCTETRPYNQGA 287
I H + ETRP NQGA
Sbjct: 180 IYMAHDLGIPLHVWVDETRPRNQGA 204
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 43/170 (25%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---- 65
+ S+ I DQ LP + + + + +E AI M RGAP I V G+ + ++
Sbjct: 16 DGWSVGIFDQRRLPWSVERLRLTTMEACALAIADMATRGAPLIGAVAAYGIALALRADPG 75
Query: 66 ----DKQFP-----------------------------DNELIQLIES--MLEKDISDNK 90
D+ F D + +E+ + + D+ N
Sbjct: 76 DESLDRAFDRLVSTRPTAVNLRWALDRVRGVVTRLPERDRAAVAYVEAGAICDADVEVNA 135
Query: 91 AIGRNGA---QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
AIGR G Q+L++ NP +N+LTHCN G LAT ++GTA I H
Sbjct: 136 AIGRAGLEILQSLVEANPG-RAINILTHCNAGWLATVDWGTATAPIYMAH 184
>gi|91200837|emb|CAJ73891.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 344
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 7/147 (4%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
++ IKD + D ++ K + +YL S+RPTAVN+ ++ E + PV+T+K
Sbjct: 58 LLGIKDIRTDDTEAFFKELKNVTNYLGSSRPTAVNLFWGLSRMERVAWE-NRDKPVHTIK 116
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
L++ ++ +D S + IG NGA+ + D + VLTHCN G LATA+YGTAL
Sbjct: 117 EILLREAINVQNEDKSICRQIGENGAKFIKDGD------GVLTHCNAGGLATADYGTALA 170
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
V+ K Y ETRP QGAR
Sbjct: 171 VMFKAKENGKKFKVYADETRPLLQGAR 197
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 54/168 (32%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNE 73
++++DQ LLP K + +++ ++AIK++ VRGAPAI I G+++ IKD + D E
Sbjct: 11 VRLIDQTLLPAEIKYIYCEDLKSIWRAIKTLMVRGAPAIGIAAVTGVLLGIKDIRTDDTE 70
Query: 74 L----------------------------------------IQLIESML--------EKD 85
+ I+ +L +D
Sbjct: 71 AFFKELKNVTNYLGSSRPTAVNLFWGLSRMERVAWENRDKPVHTIKEILLREAINVQNED 130
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
S + IG NGA+ + D + VLTHCN G LATA+YGTAL V+
Sbjct: 131 KSICRQIGENGAKFIKDGD------GVLTHCNAGGLATADYGTALAVM 172
>gi|443309883|ref|ZP_21039562.1| S-methyl-5-thioribose-1-phosphate isomerase [Synechocystis sp. PCC
7509]
gi|442780078|gb|ELR90292.1| S-methyl-5-thioribose-1-phosphate isomerase [Synechocystis sp. PCC
7509]
Length = 367
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ ++++ ++DQ LP+ LV+I+ +D QAIK+M VRGAPAI + G+ + ++
Sbjct: 24 VIWSENAVWLIDQTRLPNEYSLVEIHRCDDMAQAIKTMIVRGAPAIGVAAAYGMYLGARE 83
Query: 67 KQFPDNE-----------------------------------------------LIQLIE 79
+ E L++ +
Sbjct: 84 IDTQNRERFFTHLEEVAKLLRSTRPTAVNLFWAIARMLRTAYESIGNVDQIKEILLKTAQ 143
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
S+ +D+ AIG G AL NP KLN+LTHCN G+LATA YGTALGV+RS
Sbjct: 144 SINSEDLQTCHAIGDYGLAAL-PTNP--DKLNLLTHCNAGALATAGYGTALGVVRS 196
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG + +D ++++ ++ E L S RPTAVN+ A
Sbjct: 73 AAYGMYLGA--------REIDTQNRE-----RFFTHLEEVAKLLRSTRPTAVNLFWAIAR 119
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V+ +K L++ +S+ +D+ AIG G AL NP KLN+L
Sbjct: 120 MLRTAYE--SIGNVDQIKEILLKTAQSINSEDLQTCHAIGDYGLAAL-PTNP--DKLNLL 174
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA YGTALGV+RS ++ Y ETRP QGA+
Sbjct: 175 THCNAGALATAGYGTALGVVRSAWREGRLTRLYADETRPRLQGAK 219
>gi|15679860|ref|NP_276978.1| translation initiation factor eIF-2B subunit alpha
[Methanothermobacter thermautotrophicus str. Delta H]
gi|3182985|sp|O27900.1|MTNA_METTH RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|2623009|gb|AAB86338.1| translation initiation factor eIF-2B, alpha subunit
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 311
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 20/120 (16%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
++RPTAVN+ A D V S SP++ T M +D+ N+AIGR+GA
Sbjct: 78 ASRPTAVNLFWAVDRVMKS------ESPLDEAIT--------MYMEDMETNRAIGRHGAG 123
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ D + VLTHCN G+LA +YGTALGVIR+ K C ETRP QGAR
Sbjct: 124 LIEDGD------TVLTHCNAGALACVDYGTALGVIRAAWDDGKRLTVICDETRPVGQGAR 177
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 32/159 (20%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++++I ++ L ++DQ LP + + + D AIK+M VRGAPAI + G+ +
Sbjct: 2 NMKTIEWKDGELVLIDQRKLPDSLEYFRCRDYRDVIYAIKNMVVRGAPAIGVTAAFGVAM 61
Query: 63 -------------DIKDKQFPDNELIQLIE-------------SMLEKDISDNKAIGRNG 96
+IK + L ++ +M +D+ N+AIGR+G
Sbjct: 62 AELAGEDVEVAAEEIKASRPTAVNLFWAVDRVMKSESPLDEAITMYMEDMETNRAIGRHG 121
Query: 97 AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
A + D + VLTHCN G+LA +YGTALGVIR+
Sbjct: 122 AGLIEDGD------TVLTHCNAGALACVDYGTALGVIRA 154
>gi|451979711|ref|ZP_21928124.1| 5-methylthioribose-1-phosphate isomerase [Nitrospina gracilis
3/211]
gi|451763080|emb|CCQ89321.1| 5-methylthioribose-1-phosphate isomerase [Nitrospina gracilis
3/211]
Length = 346
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D ++ + ++ L ARPTAVN+K A D + + + S V+ +K RL Q ++
Sbjct: 69 DYNTFMAQLEQQCAKLGQARPTAVNLKWAIDRMLTVTKAHSHLS-VSDIKQRLKQEAMAI 127
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+DI+ N+ +G G Q+LI+ N +LTHCN G+LATA +GTALGV+R+ A K
Sbjct: 128 YTEDIATNEKMGGFG-QSLIEDNS-----TILTHCNAGALATAGFGTALGVVRAAVNAGK 181
Query: 272 IGAAYCTETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 182 NVRVLANETRPFLQGAR 198
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 95/223 (42%), Gaps = 67/223 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL--- 60
+++I Y ++++DQ LP + VD +ED +AI+ M +RGAPAI + +G+
Sbjct: 2 VKTIEYMDGVVRMIDQTRLPSETVFVDCKTIEDVGEAIRGMVIRGAPAIGVAAAMGISLG 61
Query: 61 --VVDIKDKQFPDNELIQ-----------------LIESMLE------------------ 83
+D D +L Q I+ ML
Sbjct: 62 ANAIDAADYNTFMAQLEQQCAKLGQARPTAVNLKWAIDRMLTVTKAHSHLSVSDIKQRLK 121
Query: 84 --------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+DI+ N+ +G G Q+LI+ N +LTHCN G+LATA +GTALGV+R+
Sbjct: 122 QEAMAIYTEDIATNEKMGGFG-QSLIEDNS-----TILTHCNAGALATAGFGTALGVVRA 175
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMK 178
A K V + E +L AR TA +K
Sbjct: 176 AVNAGKNVRV-------------LANETRPFLQGARLTAWELK 205
>gi|417302564|ref|ZP_12089662.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica WH47]
gi|327541122|gb|EGF27668.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica WH47]
Length = 356
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ +D+L ++RPTAVN+ A D +++ + +++ PV ++ RL+ + + D ++
Sbjct: 88 QTIDFLATSRPTAVNLFWALDRMRAIVDDFS--GPVAELRERLVTEAIRIHDDDRQMCRS 145
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IGR+GA L D +V+THCN GSLAT+ +GTAL + LH + + ETR
Sbjct: 146 IGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGHSLEVFADETR 199
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 200 PLLQGAR 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IGR+GA L D +V+THCN GSLAT+ +GTAL + LH +
Sbjct: 144 RSIGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGH-------- 189
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-------DSVKSSL 188
SLE + E L AR TA + +A DS+ SL
Sbjct: 190 -----SLEVFADETRPLLQGARLTAWELHQAGIPVTVCTDSMSGSL 230
>gi|427722313|ref|YP_007069590.1| methylthioribose-1-phosphate isomerase [Leptolyngbya sp. PCC 7376]
gi|427354033|gb|AFY36756.1| methylthioribose-1-phosphate isomerase [Leptolyngbya sp. PCC 7376]
Length = 348
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A + V + AK V +K L+ + + + D++ +AIG G
Sbjct: 87 LSQTRPTAVNLFWAINRVLETAKTAAKTESVAAIKVLLLTTAKEIHQNDVATCQAIGDYG 146
Query: 227 AQALIDLNPGVSK-LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
AL P SK L +LTHCN G+LATA YGTA+GVIRS ++ + ETRP Q
Sbjct: 147 LTAL----PDTSKPLTLLTHCNAGALATAGYGTAVGVIRSAWREGRLDRVFADETRPRLQ 202
Query: 286 GAR 288
G++
Sbjct: 203 GSK 205
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 96/213 (45%), Gaps = 59/213 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K + I ++ + ++DQ +LP ++++IN ++ AIK+M VRGAPAI + GL
Sbjct: 3 KPINPIQWQDERVLLIDQRVLPLKYEILEINTYQEMAAAIKTMVVRGAPAIGVSAAYGLY 62
Query: 62 VDIKDKQFPD-----------------------------------------NELIQLIES 80
+ +D + D E + I+
Sbjct: 63 LGARDIETDDPAIFLEELAAIASVLSQTRPTAVNLFWAINRVLETAKTAAKTESVAAIKV 122
Query: 81 ML--------EKDISDNKAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYGTALG 131
+L + D++ +AIG G AL P SK L +LTHCN G+LATA YGTA+G
Sbjct: 123 LLLTTAKEIHQNDVATCQAIGDYGLTAL----PDTSKPLTLLTHCNAGALATAGYGTAVG 178
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKL 164
VIRS ++ D+ F D ++ + G KL
Sbjct: 179 VIRSAWREGRL----DRVFAD-ETRPRLQGSKL 206
>gi|347755243|ref|YP_004862807.1| methylthioribose-1-phosphate isomerase [Candidatus
Chloracidobacterium thermophilum B]
gi|347587761|gb|AEP12291.1| methylthioribose-1-phosphate isomerase [Candidatus
Chloracidobacterium thermophilum B]
Length = 346
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
+ + RPTAVN+ A + ++ A+ +P + L+ +++ +DI+ + IGR+
Sbjct: 82 MAATRPTAVNLFWAIERMRRQFEHLRAEKTPEALIAEALVAEAQAIHAEDIATCRQIGRH 141
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA+ + D VLTHCN G+LATA YGTALGVIR+ K Y ETRP+ Q
Sbjct: 142 GAELIPD------GATVLTHCNAGALATAGYGTALGVIRAAVEQGKRITVYADETRPFLQ 195
Query: 286 GAR 288
GAR
Sbjct: 196 GAR 198
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 56/198 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++++ + ++++DQ +LP + E+ +AI++M +RGAPAI + G+ +
Sbjct: 1 MRTVEWTPAGVRVIDQRVLPGSELYRTYTTCEEVAEAIRTMVIRGAPAIGVAAAFGIALG 60
Query: 64 IK-------------------------------------DKQF--------PD----NEL 74
++ +QF P+ L
Sbjct: 61 VRASVAAGEDLPAAFERICQTMAATRPTAVNLFWAIERMRRQFEHLRAEKTPEALIAEAL 120
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ +++ +DI+ + IGR+GA+ + D VLTHCN G+LATA YGTALGVIR
Sbjct: 121 VAEAQAIHAEDIATCRQIGRHGAELIPD------GATVLTHCNAGALATAGYGTALGVIR 174
Query: 135 -SLHGANKIVDIKDKQFP 151
++ +I D+ P
Sbjct: 175 AAVEQGKRITVYADETRP 192
>gi|421613950|ref|ZP_16055019.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica SH28]
gi|408495157|gb|EKJ99746.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica SH28]
Length = 356
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ +D+L ++RPTAVN+ A D +++ + +++ PV ++ RL+ + + D ++
Sbjct: 88 QTIDFLATSRPTAVNLFWALDRMRAIVDDFS--GPVAELRERLVTEAIRIHDDDRQMCRS 145
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IGR+GA L D +V+THCN GSLAT+ +GTAL + LH + + ETR
Sbjct: 146 IGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGHSLEVFADETR 199
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 200 PLLQGAR 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IGR+GA L D +V+THCN GSLAT+ +GTAL + LH +
Sbjct: 144 RSIGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGH-------- 189
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-------DSVKSSL 188
SLE + E L AR TA + +A DS+ SL
Sbjct: 190 -----SLEVFADETRPLLQGARLTAWELHQAGIPVTVCTDSMSGSL 230
>gi|315426121|dbj|BAJ47766.1| methylthioribose-1-phosphate isomerase [Candidatus Caldiarchaeum
subterraneum]
gi|343484981|dbj|BAJ50635.1| methylthioribose-1-phosphate isomerase [Candidatus Caldiarchaeum
subterraneum]
Length = 345
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A D + +E SP + L+ + + +D+ NK IGR G
Sbjct: 88 LGSTRPTAVNLFWALDRMMKK-AENIDGSPAE-IAEELLNEAQKIHREDVEMNKTIGRLG 145
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ + D + +LTHCN G+LATA YGTALGVIR H + K Y +ETRP QG
Sbjct: 146 AELIPDNS------RILTHCNAGALATAGYGTALGVIRYAHESGKQILVYASETRPRLQG 199
Query: 287 AR 288
A+
Sbjct: 200 AK 201
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 55/190 (28%)
Query: 1 MKSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC- 57
M ++++I +++ L +LDQ LP K + +V++ AIK M VRGAPAI +
Sbjct: 1 MPAVETIRWDERRGELVLLDQRFLPARVKFLRCGDVDEVAVAIKEMAVRGAPAIGVAAAY 60
Query: 58 -------------------------------------LGLVVD--IKDKQFPDNELIQLI 78
L +D +K + D ++
Sbjct: 61 GMALAALRSRARTREQLLTKLRKAAKTLGSTRPTAVNLFWALDRMMKKAENIDGSPAEIA 120
Query: 79 ESML-------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
E +L +D+ NK IGR GA+ + D N R +LTHCN G+LATA YGTALG
Sbjct: 121 EELLNEAQKIHREDVEMNKTIGRLGAELIPD-NSR-----ILTHCNAGALATAGYGTALG 174
Query: 132 VIRSLHGANK 141
VIR H + K
Sbjct: 175 VIRYAHESGK 184
>gi|440714540|ref|ZP_20895119.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica SWK14]
gi|436440736|gb|ELP34040.1| translation initiation factor, aIF-2BI family [Rhodopirellula
baltica SWK14]
Length = 356
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 74/127 (58%), Gaps = 8/127 (6%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ +D+L ++RPTAVN+ A D +++ + +++ PV ++ RL+ + + D ++
Sbjct: 88 QTIDFLATSRPTAVNLFWALDRMRAIVDDFS--GPVAELRERLVTEAIRIHDDDRQMCRS 145
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IGR+GA L D +V+THCN GSLAT+ +GTAL + LH + + ETR
Sbjct: 146 IGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGHSLEVFADETR 199
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 200 PLLQGAR 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IGR+GA L D +V+THCN GSLAT+ +GTAL + LH +
Sbjct: 144 RSIGRHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGH-------- 189
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-------DSVKSSL 188
SLE + E L AR TA + +A DS+ SL
Sbjct: 190 -----SLEVFADETRPLLQGARLTAWELHQAGIPVTVCTDSMSGSL 230
>gi|21227473|ref|NP_633395.1| translation initiation factor IF-2B subunit alpha [Methanosarcina
mazei Go1]
gi|20905845|gb|AAM31067.1| Archaeal protein translation initiation factor 2B subunit 1
[Methanosarcina mazei Go1]
Length = 342
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D +S+ K + L S RPTAVN+ D V +++S+ A ++ +Q +
Sbjct: 73 DIESMTKDLKVAAKALKSTRPTAVNLAWGVDRVLNAISD---AFDFRGIRDIALQEARDI 129
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E+DI NK IG+ GA+ L D + VLTHCN G LA ++GTALGV+RS K
Sbjct: 130 AEEDIETNKLIGKYGAKLLKDGD------TVLTHCNAGRLACVDWGTALGVVRSAIADGK 183
Query: 272 IGAAYCTETRPYNQGAR 288
ETRP NQG+R
Sbjct: 184 EIKVLACETRPLNQGSR 200
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 6/61 (9%)
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q + E+DI NK IG+ GA+ L D + VLTHCN G LA ++GTALGV+R
Sbjct: 123 LQEARDIAEEDIETNKLIGKYGAKLLKDGD------TVLTHCNAGRLACVDWGTALGVVR 176
Query: 135 S 135
S
Sbjct: 177 S 177
>gi|254415613|ref|ZP_05029372.1| methylthioribose-1-phosphate isomerase [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177563|gb|EDX72568.1| methylthioribose-1-phosphate isomerase [Coleofasciculus
chthonoplastes PCC 7420]
Length = 351
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
I++ + ++DQ LPH +V+I ED +AI++M VRGAPAI + G+ + +D
Sbjct: 9 IVWRDDRVLLIDQTRLPHNYTVVEIKCCEDMARAIRTMIVRGAPAIGVAAAYGMYLGARD 68
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
+ D E L I ML+
Sbjct: 69 IKTADRETFVTELEEVAKLLRQTRPTAVNLFWAIARMLKTAHETIGSVDQLKTALLVTAQ 128
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+D+ KAIG NG A+ P KL +LT+CN GSLATA YGTALGV+RS
Sbjct: 129 GIQVEDLEICKAIGDNGLAAM-PATP--EKLCILTYCNAGSLATAGYGTALGVVRSTWRE 185
Query: 140 NKIVDI 145
++ I
Sbjct: 186 KRLARI 191
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+D + D ++ + E L RPTAVN+ A + + E V+ +KT L+
Sbjct: 67 RDIKTADRETFVTELEEVAKLLRQTRPTAVNLFWAIARMLKTAHE--TIGSVDQLKTALL 124
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + +D+ KAIG NG A+ P KL +LT+CN GSLATA YGTALGV+RS
Sbjct: 125 VTAQGIQVEDLEICKAIGDNGLAAM-PATP--EKLCILTYCNAGSLATAGYGTALGVVRS 181
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 182 TWREKRLARIYACETRPRLQGAK 204
>gi|322434889|ref|YP_004217101.1| translation initiation factor, aIF-2BI family [Granulicella
tundricola MP5ACTX9]
gi|321162616|gb|ADW68321.1| translation initiation factor, aIF-2BI family [Granulicella
tundricola MP5ACTX9]
Length = 347
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 9/139 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIES 210
D +L V E D+L + RPTAVN+ V+ + A A +P+ +K ++ L
Sbjct: 69 DIPTLNAEVAEICDHLAATRPTAVNLFWGIGRVRDLYNTLAAANTPIPEIKKAVVALSLE 128
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGA 269
M ++DI++ + +G GA DL P + +LTHCN G+LA YG+ALGVIR ++
Sbjct: 129 MYDEDIANCRTLGAFGA----DLLP--QEGTILTHCNAGALAACGYGSALGVIRAAVEKG 182
Query: 270 NKIGAAYCTETRPYNQGAR 288
+KI + ETRPY QGAR
Sbjct: 183 HKI-SVLADETRPYLQGAR 200
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 7/79 (8%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
++ L M ++DI++ + +G GA DL P+ + +LTHCN G+LA YG+ALGVI
Sbjct: 122 VVALSLEMYDEDIANCRTLGAFGA----DLLPQ--EGTILTHCNAGALAACGYGSALGVI 175
Query: 134 R-SLHGANKIVDIKDKQFP 151
R ++ +KI + D+ P
Sbjct: 176 RAAVEKGHKISVLADETRP 194
>gi|386393028|ref|ZP_10077809.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio sp. U5L]
gi|385733906|gb|EIG54104.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio sp. U5L]
Length = 347
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 72/127 (56%), Gaps = 11/127 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEW-AKASP-VNTVKTRLIQLIESMLEKDISDNKA 221
L L ARPTAVN++ A ++ +W A P ++ + + + + M +DI NKA
Sbjct: 82 LTELEEARPTAVNLRWAVSRLRG---QWQAMDDPSLDALASAWLCTAQDMHAEDIEINKA 138
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+G+NGA + D + V+THCN G+LATA YGTALGVIR+ K ETR
Sbjct: 139 MGKNGADCIADGD------TVMTHCNAGALATAGYGTALGVIRAAFEQGKRIRVIANETR 192
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 193 PFLQGAR 199
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 53/173 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD------ 63
++H+L +LDQ LP + N D A+++M VRGAPAI + G +
Sbjct: 10 DRHALILLDQRFLPDREEYFVCRNTADTIYALQTMVVRGAPAIGVTAAYGCYLAAREAAE 69
Query: 64 ----IKDK-----------------------------QFPDNELIQLIES--------ML 82
KD+ Q D+ + + S M
Sbjct: 70 AKAAWKDRLTALLTELEEARPTAVNLRWAVSRLRGQWQAMDDPSLDALASAWLCTAQDMH 129
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+DI NKA+G+NGA + D + V+THCN G+LATA YGTALGVIR+
Sbjct: 130 AEDIEINKAMGKNGADCIADGD------TVMTHCNAGALATAGYGTALGVIRA 176
>gi|443327480|ref|ZP_21056104.1| S-methyl-5-thioribose-1-phosphate isomerase [Xenococcus sp. PCC
7305]
gi|442792909|gb|ELS02372.1| S-methyl-5-thioribose-1-phosphate isomerase [Xenococcus sp. PCC
7305]
Length = 347
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG R + N+ ++ D++ K +GE RPTAVN+ A
Sbjct: 60 AGYGMYLGA-REIDTRNR-----EEFLTQLDAIAKMLGE-------TRPTAVNLFWAISR 106
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V +K L++ +++ ++D++ +AIG +G L P + +L
Sbjct: 107 MLKTAQE--STGTVAEIKATLLETAKAIQQEDLNTCQAIGDHGLSVL----PDKPQSTIL 160
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN GSLATA YGTALGV+RS K+ Y ETRP QGA+
Sbjct: 161 THCNAGSLATAGYGTALGVVRSAWREEKLQRVYADETRPRLQGAK 205
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 55/186 (29%)
Query: 1 MKSLQS----IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG 56
MK+L + +I++ + + ++DQ LP V+IN +D +AI +M VRGAPAI +
Sbjct: 1 MKTLSNPIYPVIWQDNHVVLIDQTRLPGEHSTVNINRSQDMAEAITTMIVRGAPAIGVAA 60
Query: 57 CLGLVVDIKDKQFPDNE------------------------------------------- 73
G+ + ++ + E
Sbjct: 61 GYGMYLGAREIDTRNREEFLTQLDAIAKMLGETRPTAVNLFWAISRMLKTAQESTGTVAE 120
Query: 74 ----LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
L++ +++ ++D++ +AIG +G L P + +LTHCN GSLATA YGTA
Sbjct: 121 IKATLLETAKAIQQEDLNTCQAIGDHGLSVL----PDKPQSTILTHCNAGSLATAGYGTA 176
Query: 130 LGVIRS 135
LGV+RS
Sbjct: 177 LGVVRS 182
>gi|237747038|ref|ZP_04577518.1| translation initiation factor 2B subunit I family [Oxalobacter
formigenes HOxBLS]
gi|229378389|gb|EEO28480.1| translation initiation factor 2B subunit I family [Oxalobacter
formigenes HOxBLS]
Length = 352
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 75/128 (58%), Gaps = 9/128 (7%)
Query: 162 EKLDYLVSARPTAVNMKRAADSV-KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
E + L ++RPTAVN+ A D + K LS K+ + + L+Q ++L++DI N+
Sbjct: 81 EGFNILAASRPTAVNLFWALDRMRKLWLSHPDKS--LKELSGILLQEAHAILDEDIGINR 138
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+G+ GA L D VLTHCN G+LATA +GTALGV RS A K + + ET
Sbjct: 139 KMGQYGATLLPD------GAKVLTHCNAGALATAGHGTALGVFRSAIEAGKRLSVFADET 192
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 193 RPFLQGAR 200
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 96/225 (42%), Gaps = 67/225 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M+ +Q++ + ++++DQ LLP ++ V ++ + AI+ M VRGAPAI + G+
Sbjct: 1 MERVQTLRWNGKQIELIDQRLLPFRTEYVACDSAKSVAGAIRDMVVRGAPAIGVAAAYGI 60
Query: 61 VVDIK--------------DKQF---------------------------PDNEL----- 74
++ + ++ F PD L
Sbjct: 61 ALEARRLAGTMPSVFAERLNEGFNILAASRPTAVNLFWALDRMRKLWLSHPDKSLKELSG 120
Query: 75 --IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+Q ++L++DI N+ +G+ GA L D VLTHCN G+LATA +GTALGV
Sbjct: 121 ILLQEAHAILDEDIGINRKMGQYGATLLPD------GAKVLTHCNAGALATAGHGTALGV 174
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
RS A K L + E +L AR TA +
Sbjct: 175 FRSAIEAGK-------------RLSVFADETRPFLQGARLTAWEL 206
>gi|323141048|ref|ZP_08075954.1| S-methyl-5-thioribose-1-phosphate isomerase [Phascolarctobacterium
succinatutens YIT 12067]
gi|322414496|gb|EFY05309.1| S-methyl-5-thioribose-1-phosphate isomerase [Phascolarctobacterium
succinatutens YIT 12067]
Length = 348
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 11/125 (8%)
Query: 167 LVSARPTAVNMKRAAD---SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L++ARPTAVN+ AA+ ++ L+ K SP +K L + E + DI+ NK +G
Sbjct: 82 LITARPTAVNLAWAANLQYALAVRLNGEDK-SPAAIIKA-LEEKAEQIYADDITMNKRMG 139
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA L D VLTHCN G+LAT +GTALGVIRS + K+ Y ETRP
Sbjct: 140 EYGAAVLPD------AAVVLTHCNAGALATCGWGTALGVIRSAYAQGKLKMVYADETRPL 193
Query: 284 NQGAR 288
QGAR
Sbjct: 194 LQGAR 198
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 54/187 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ +E+ SL +LDQ LLP + + + + AI+ ++VRGAPAI +V+
Sbjct: 2 VETMRWEQGSLVLLDQTLLPQKIEWITCVDYKRVKVAIERLEVRGAPAIGAAAAFAMVLG 61
Query: 63 --DIKDK------------------------------QFP--------DNELIQLIESML 82
++ DK Q+ D +I+++
Sbjct: 62 AREVADKPDFLGALDAVRADLITARPTAVNLAWAANLQYALAVRLNGEDKSPAAIIKALE 121
Query: 83 EK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
EK DI+ NK +G GA L D VLTHCN G+LAT +GTALGVIRS
Sbjct: 122 EKAEQIYADDITMNKRMGEYGAAVLPD------AAVVLTHCNAGALATCGWGTALGVIRS 175
Query: 136 LHGANKI 142
+ K+
Sbjct: 176 AYAQGKL 182
>gi|357417251|ref|YP_004930271.1| methylthioribose-1-phosphate isomerase [Pseudoxanthomonas spadix
BD-a59]
gi|355334829|gb|AER56230.1| methylthioribose-1-phosphate isomerase [Pseudoxanthomonas spadix
BD-a59]
Length = 351
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 73/129 (56%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L +ARPTAVN+ A ++ +L ++W V R Q I S +D++ N
Sbjct: 92 LQRLNAARPTAVNLAWALARMRRALLPAGADW------RAVLEREAQAIAS---EDLAAN 142
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA ALI GV LTHCNTGSLATA +GTALGVIR+ +I + E
Sbjct: 143 RHMGELGA-ALIGQGSGV-----LTHCNTGSLATAGFGTALGVIRAGVAQGRILKVFADE 196
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 197 TRPWQQGAR 205
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+++ +D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 132 QAIASEDLAANRHMGELGA-ALIGQGS-----GVLTHCNTGSLATAGFGTALGVIRAGVA 185
Query: 139 ANKIVDI 145
+I+ +
Sbjct: 186 QGRILKV 192
>gi|427721237|ref|YP_007069231.1| methylthioribose-1-phosphate isomerase [Calothrix sp. PCC 7507]
gi|427353673|gb|AFY36397.1| methylthioribose-1-phosphate isomerase [Calothrix sp. PCC 7507]
Length = 387
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG R + AN+ D ++ + + L S RPTAVN+ A
Sbjct: 91 AAYGIYLGA-REIETANR------------DEFLAHLEKVAELLRSTRPTAVNLFWAISR 137
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V +K L+Q +++ +D+ +AIG +G L L +KL +L
Sbjct: 138 MMRTADE--SIGTVEELKQTLLQTAQNINAEDLQTCQAIGDHG---LTVLPATPAKLTLL 192
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA YGTALGV+RS ++ + ETRP QGA+
Sbjct: 193 THCNAGALATAGYGTALGVVRSAWREGRLERVFADETRPRLQGAK 237
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I++ +S+ ++DQ LP+ V+I+ ED +AIK+M VRGAPAI + G+ + ++
Sbjct: 42 VIWQNNSVSLIDQTRLPNEYTFVEISRSEDMARAIKTMIVRGAPAIGVAAAYGIYLGARE 101
Query: 67 KQFPDNE-----------------------------------------------LIQLIE 79
+ + + L+Q +
Sbjct: 102 IETANRDEFLAHLEKVAELLRSTRPTAVNLFWAISRMMRTADESIGTVEELKQTLLQTAQ 161
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ +AIG +G L L +KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 162 NINAEDLQTCQAIGDHG---LTVLPATPAKLTLLTHCNAGALATAGYGTALGVVRS 214
>gi|440679826|ref|YP_007154621.1| methylthioribose-1-phosphate isomerase [Anabaena cylindrica PCC
7122]
gi|428676945|gb|AFZ55711.1| methylthioribose-1-phosphate isomerase [Anabaena cylindrica PCC
7122]
Length = 352
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 88/180 (48%), Gaps = 52/180 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L ++++ +S+ ++DQ LP+ +V+I+ ED +AI++M VRGAPAI + G+ +
Sbjct: 2 LYPVVWKNNSVLLIDQTRLPNEYAVVEIHRSEDMAEAIRTMIVRGAPAIGVAAAYGMYLG 61
Query: 64 IKDKQFPD-NELIQLIE---------------------------------------SMLE 83
++ + D E +Q +E ++LE
Sbjct: 62 AREIETSDRTEFLQQLEKVAQLLRSTRPTAVNLFWAIGRMMQTAYETIGTVAEIQQTLLE 121
Query: 84 K-------DISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
DI +AIG +G AL P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 122 TAQTINTDDIQTCQAIGNHGLAAL----PKTPEKLIILTHCNAGALATAGYGTALGVVRS 177
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + + E V ++ L++ +++ DI +AIG +G
Sbjct: 84 LRSTRPTAVNLFWAIGRMMQTAYE--TIGTVAEIQQTLLETAQTINTDDIQTCQAIGNHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
AL P KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 142 LAALPK-TP--EKLIILTHCNAGALATAGYGTALGVVRSAWREGRLTRVFADETRPRLQG 198
Query: 287 AR 288
A+
Sbjct: 199 AK 200
>gi|307153951|ref|YP_003889335.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
7822]
gi|306984179|gb|ADN16060.1| translation initiation factor, aIF-2BI family [Cyanothece sp. PCC
7822]
Length = 350
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 84/165 (50%), Gaps = 18/165 (10%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG + +I+ Q D L+K + E L RPTAVN+ A
Sbjct: 60 AAYGMYLGAL----------EIETDQ--RKDFLQK-LEEVAQLLQQTRPTAVNLFWAISR 106
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + E V +K L++ + + ++D+ AIG+NG L P +L +L
Sbjct: 107 MLKTAYE--SLGTVEEIKAILLKTAQDIQQEDLETCYAIGKNGLSVLPS-EP--HQLRIL 161
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTG LATA YGTALGVIRS + ++ Y ETRP QGA+
Sbjct: 162 THCNTGGLATAGYGTALGVIRSAWQSGRLLRVYADETRPRLQGAK 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 89/186 (47%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---VVD 63
+I++ + ++DQ LP+ +V+I+ D QAIK+M VRGAPAI + G+ ++
Sbjct: 11 VIWKNDQVLLIDQTRLPNEYSVVEISRSLDMAQAIKTMIVRGAPAIGVAAAYGMYLGALE 70
Query: 64 IKDKQFPD-----NELIQLIES--------------ML---------------------- 82
I+ Q D E+ QL++ ML
Sbjct: 71 IETDQRKDFLQKLEEVAQLLQQTRPTAVNLFWAISRMLKTAYESLGTVEEIKAILLKTAQ 130
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++D+ AIG+NG L L +L +LTHCNTG LATA YGTALGVIRS +
Sbjct: 131 DIQQEDLETCYAIGKNG---LSVLPSEPHQLRILTHCNTGGLATAGYGTALGVIRSAWQS 187
Query: 140 NKIVDI 145
+++ +
Sbjct: 188 GRLLRV 193
>gi|121997374|ref|YP_001002161.1| eIF-2B alpha/beta/delta-like protein [Halorhodospira halophila SL1]
gi|218526620|sp|A1WUJ7.1|MTNA_HALHL RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|121588779|gb|ABM61359.1| translation initiation factor 2B subunit I family (IF-2BI)
[Halorhodospira halophila SL1]
Length = 354
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 15/132 (11%)
Query: 160 VGEKLDYLVSARPTAVNMK---RAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
+ E +D L +RPTAVN+ R ++ + L E +P L+ +++ E+D+
Sbjct: 84 MAEDIDTLRRSRPTAVNLGWALRRMEAFAARLPEDQDPAPA------LLAEAQAIHEEDV 137
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ N+ +GR+GA LI PG VLTHCNTGSLAT GTALGVIR+ ++ +
Sbjct: 138 AANRRMGRSGA-GLI--QPGS---GVLTHCNTGSLATGGLGTALGVIRTAWADGRVERVF 191
Query: 277 CTETRPYNQGAR 288
ETRP+ QG+R
Sbjct: 192 ADETRPWLQGSR 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 95/228 (41%), Gaps = 67/228 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL---- 58
+++++ + L +LDQ LLP + + + QAI M VRGAPAI +
Sbjct: 8 TVRALEWRDEGLYLLDQRLLPDQEQYLCCADAASVAQAITDMVVRGAPAIGVAAGYGAAL 67
Query: 59 ---------------GLVVDI---------------------------KDKQFPDNELIQ 76
G+ DI + Q P L+
Sbjct: 68 AGAAAWRTHGSGWQAGMAEDIDTLRRSRPTAVNLGWALRRMEAFAARLPEDQDPAPALLA 127
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+++ E+D++ N+ +GR+GA LI VLTHCNTGSLAT GTALGVIR+
Sbjct: 128 EAQAIHEEDVAANRRMGRSGA-GLIQPGS-----GVLTHCNTGSLATGGLGTALGVIRTA 181
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV 184
++ ++ F D E +L +R TA + AAD +
Sbjct: 182 WADGRV----ERVFAD---------ETRPWLQGSRLTAWEL--AADGI 214
>gi|350551636|ref|ZP_08920849.1| Methylthioribose-1-phosphate isomerase [Thiorhodospira sibirica
ATCC 700588]
gi|349796774|gb|EGZ50557.1| Methylthioribose-1-phosphate isomerase [Thiorhodospira sibirica
ATCC 700588]
Length = 358
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 50/186 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S++++ + L++LDQ +LPHT +DI++ D AI+ M VRGAPAI I G+V+
Sbjct: 13 SVRAVQWLDAKLRLLDQRVLPHTVSYLDIDSASDTAAAIRDMVVRGAPAIGITAAYGVVL 72
Query: 63 DIK-----DKQ-----------------------F------------------PDNELIQ 76
++ D Q F P N L+
Sbjct: 73 AVRQALTHDPQNWQTRLQADIETLAASRPTAVNLFWALKHMQSCIAQLPAGTDPVNALLA 132
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++DI+ N+ +G GA L + K LTHCN+G+LAT YGT LGVIRS
Sbjct: 133 EAQRLHQEDIAANQRMGELGAAFL----QQGGKDCALTHCNSGALATGGYGTGLGVIRSA 188
Query: 137 HGANKI 142
+ I
Sbjct: 189 YAKGYI 194
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 24/168 (14%)
Query: 123 TAEYGTALGVIRSL-HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
TA YG L V ++L H D + + + ++ L ++RPTAVN+ A
Sbjct: 65 TAAYGVVLAVRQALTH--------------DPQNWQTRLQADIETLAASRPTAVNLFWAL 110
Query: 182 DSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKL 240
++S +++ A PVN L+ + + ++DI+ N+ +G GA L K
Sbjct: 111 KHMQSCIAQLPAGTDPVNA----LLAEAQRLHQEDIAANQRMGELGAAFLQQGG----KD 162
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN+G+LAT YGT LGVIRS + I + ETRP+ QG+R
Sbjct: 163 CALTHCNSGALATGGYGTGLGVIRSAYAKGYIRHVFADETRPWLQGSR 210
>gi|257054915|ref|YP_003132747.1| methylthioribose-1-phosphate isomerase [Saccharomonospora viridis
DSM 43017]
gi|256584787|gb|ACU95920.1| methylthioribose-1-phosphate isomerase [Saccharomonospora viridis
DSM 43017]
Length = 333
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D++S V + + L ARPTAVN++ + ++L + A A + + ++
Sbjct: 68 DSESALAAVRAEAERLAHARPTAVNLRYGVERALAALPQGADAVLTDAL---------AV 118
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
L++D N+A R+ A+ L+ P L VLTHCNTG LAT +GTALG +R LH +
Sbjct: 119 LDEDERVNRAASRHAAELLLRRCPP-RPLRVLTHCNTGRLATVAWGTALGTVRHLHADGR 177
Query: 272 IGAAYCTETRPYNQGAR 288
I ETRP QG+R
Sbjct: 178 IDQVLVDETRPLLQGSR 194
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++L++D N+A R+ A+ L+ P L VLTHCNTG LAT +GTALG +R LH
Sbjct: 117 AVLDEDERVNRAASRHAAELLLRRCP-PRPLRVLTHCNTGRLATVAWGTALGTVRHLHAD 175
Query: 140 NKI 142
+I
Sbjct: 176 GRI 178
>gi|414154267|ref|ZP_11410586.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454058|emb|CCO08490.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 350
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 70/118 (59%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN++ A D + L+ A V ++ L+ ++ ++DI N+ +G G QAL
Sbjct: 91 RPTAVNLRWALDRMMMRLAA-APEQDVQELRRILLDEAHAIYQEDIQSNRQMGEFG-QAL 148
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ P ++ VLTHCN G+LATA YGTALGVIR+ H K + ETRP QGAR
Sbjct: 149 L---PDGAR--VLTHCNAGALATAGYGTALGVIRAAHEKGKQIHVFADETRPLLQGAR 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 67/230 (29%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+++II+E + L++LDQ LP + + ++ N+ + +AIK + VRGAPAI GLVV
Sbjct: 4 SMEAIIWEHNRLRLLDQTKLPRSIEYIECNHYQTVAEAIKKLAVRGAPAIGAAAAYGLVV 63
Query: 63 -----DIKDKQF------------------------------------PDNELIQLIESM 81
+ D+Q P+ ++ +L +
Sbjct: 64 GAGQIEAADRQTFVAKLADIARELGDTRPTAVNLRWALDRMMMRLAAAPEQDVQELRRIL 123
Query: 82 L-------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
L ++DI N+ +G G QAL+ RV LTHCN G+LATA YGTALGVIR
Sbjct: 124 LDEAHAIYQEDIQSNRQMGEFG-QALLPDGARV-----LTHCNAGALATAGYGTALGVIR 177
Query: 135 SLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV 184
+ H K + + + E L AR TA M +A V
Sbjct: 178 AAHEKGKQIHV-------------FADETRPLLQGARLTAWEMLQAGIPV 214
>gi|269792646|ref|YP_003317550.1| translation initiation factor, aIF-2BI family [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100281|gb|ACZ19268.1| translation initiation factor, aIF-2BI family [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 347
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 15/129 (11%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E + L + RPTAVN+ A + ++S L++ P + + +++ ++ +D++ N+A
Sbjct: 73 EAIRVLGATRPTAVNLFWALNRMRS-LADL----PGDRMADAMVEEALTIWREDLAINRA 127
Query: 222 IGRNGAQALIDLNP--GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
IGRNGA DL P GV V+THCNTGSLAT YGTALGVIRS K + E
Sbjct: 128 IGRNGA----DLIPHEGV----VITHCNTGSLATGGYGTALGVIRSAAEQGKRIRVFVDE 179
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 180 TRPRLQGAR 188
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 76/157 (48%), Gaps = 41/157 (26%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI--------- 64
L+ILDQ +P + + + +AI SM VRGAPAI I G+ +D
Sbjct: 15 LEILDQRGIPFEVSYLKCSTSDQVAEAITSMAVRGAPAIGIAAAFGVALDALRGRDVLEA 74
Query: 65 -------------------KDKQFPDNELIQLIESMLEK-------DISDNKAIGRNGAQ 98
+ + D ++ ++M+E+ D++ N+AIGRNGA
Sbjct: 75 IRVLGATRPTAVNLFWALNRMRSLADLPGDRMADAMVEEALTIWREDLAINRAIGRNGA- 133
Query: 99 ALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
DL P V+THCNTGSLAT YGTALGVIRS
Sbjct: 134 ---DLIPHEGV--VITHCNTGSLATGGYGTALGVIRS 165
>gi|386719093|ref|YP_006185419.1| Methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia D457]
gi|384078655|emb|CCH13248.1| Methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia D457]
Length = 354
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 19/151 (12%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPV 197
++ ++ Q D + + L L ++RPTAVN+ A ++ L ++W
Sbjct: 72 VLAAREVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADW------ 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
K L +++ E+D++ N+ +G GA LI+ GV LTHCNTGSLATA +G
Sbjct: 126 ---KALLESEAQAIAEEDLAANRHMGALGA-GLIEAGSGV-----LTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ ++I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQHRIARVFAGETRPWLQGAR 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDEVASAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK------------------------DISDNKAIGRNGAQ 98
++ Q D +Q +E L++ +D KA+ + AQ
Sbjct: 75 AREVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADWKALLESEAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ + N + L VLTHCNTGSLATA +GTALGVIR+ ++I +
Sbjct: 135 AIAEEDLAANRHMGALGAGLIEAGSGVLTHCNTGSLATAGFGTALGVIRAGMAQHRIARV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +KT +
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKTGAV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|334118857|ref|ZP_08492945.1| Methylthioribose-1-phosphate isomerase [Microcoleus vaginatus
FGP-2]
gi|333459087|gb|EGK87702.1| Methylthioribose-1-phosphate isomerase [Microcoleus vaginatus
FGP-2]
Length = 353
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L S RPTAVN+ A + + + V V+ L+++ +++ +D+ K IG
Sbjct: 88 ELLRSTRPTAVNLFWAISRMLKTAER--TSGSVEQVQKTLLEMAKTIQAEDLQTCKDIGD 145
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G + L P KLN+LTHCN G+LATA YGTALGV RS ++G + ETRP
Sbjct: 146 KGLEVL-PATP--EKLNLLTHCNAGALATAGYGTALGVFRSAWREGRLGRVFADETRPRL 202
Query: 285 QGAR 288
QGA+
Sbjct: 203 QGAK 206
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ + +++ + ++DQ LP +V+I+ ED +AIK+M VRGAPAI + G+ +
Sbjct: 8 VSPVTWKEDRVLLIDQNRLPKEYGVVEISRCEDMAEAIKTMIVRGAPAIGVAAAYGMYLG 67
Query: 64 IKDKQFPDNE-----------------------------------------------LIQ 76
++ + D L++
Sbjct: 68 AREIETGDRTEFLAKLEQVGELLRSTRPTAVNLFWAISRMLKTAERTSGSVEQVQKTLLE 127
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ +++ +D+ K IG G + L P KLN+LTHCN G+LATA YGTALGV RS
Sbjct: 128 MAKTIQAEDLQTCKDIGDKGLEVL-PATP--EKLNLLTHCNAGALATAGYGTALGVFRS 183
>gi|170078903|ref|YP_001735541.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. PCC 7002]
gi|169886572|gb|ACB00286.1| translation initiation factor, putative, aIF-2BI family
[Synechococcus sp. PCC 7002]
Length = 380
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 162 EKLDYLVSA----RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
EKL+ + + RPTAVN+ A D V +++ + ++ ++ +++ +D++
Sbjct: 112 EKLEAIAATLRQTRPTAVNLFWAIDRVMATVQ--GATGNIPELQNLILNTAKAIHNEDLA 169
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
+AIG G A++ P KL +LTHCN G LATA YGTALGVIRS N++G Y
Sbjct: 170 TCQAIGDQGL-AVLPETP--EKLTILTHCNAGGLATAGYGTALGVIRSAWRENRLGMVYA 226
Query: 278 TETRPYNQGAR 288
ETRP QG++
Sbjct: 227 DETRPRLQGSK 237
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 50/187 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ I++++ + ++DQ LLP K+V+I + +AI++M VRGAPAI + GL +
Sbjct: 38 SINPIVWQEDCVLLVDQTLLPLAYKVVEIKTYQAMAEAIRTMIVRGAPAIGVSAAYGLYL 97
Query: 63 DIKDKQFPDN-------------------------------------------ELIQLI- 78
K+ Q D EL LI
Sbjct: 98 GAKEIQTTDRTIFLEKLEAIAATLRQTRPTAVNLFWAIDRVMATVQGATGNIPELQNLIL 157
Query: 79 ---ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+++ +D++ +AIG G A++ P KL +LTHCN G LATA YGTALGVIRS
Sbjct: 158 NTAKAIHNEDLATCQAIGDQGL-AVLPETP--EKLTILTHCNAGGLATAGYGTALGVIRS 214
Query: 136 LHGANKI 142
N++
Sbjct: 215 AWRENRL 221
>gi|29833200|ref|NP_827834.1| initiation factor eIF-2B alpha subunit [Streptomyces avermitilis
MA-4680]
gi|29610322|dbj|BAC74369.1| putative initiation factor eIF-2B alpha subunit [Streptomyces
avermitilis MA-4680]
Length = 346
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 172 PTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALI 231
PTAVN+ D V + E A ++ ++ +D+ N+A+G GA L+
Sbjct: 93 PTAVNLMVCVDRVLTRFDEGLDA---------VLAEAAAVQREDVGANRAMGAYGADWLL 143
Query: 232 DLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L VLTHCNTG+LATA +GTALGVIR LH ++ Y ETRP QG+R
Sbjct: 144 KRVAADRPLRVLTHCNTGALATAGWGTALGVIRELHARGQLEVVYADETRPLLQGSR 200
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 42/181 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA------------ 49
+ L+++ + +SL ++DQ +LPH ++ + + +V+ AI+ + VRGA
Sbjct: 6 QKLRAVDWTGNSLALIDQTVLPHRTETIQVRDVDGLVDAIQRLVVRGAPAIGAAGAYGVA 65
Query: 50 ----------------------------PAIAIVGCLGLVVDIKDKQFPDNELIQLIESM 81
A+ ++ C+ V+ D+ + ++ ++
Sbjct: 66 LAVLEGEREGWDRTQVLAAVARIRAARPTAVNLMVCVDRVLTRFDEGL--DAVLAEAAAV 123
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+D+ N+A+G GA L+ L VLTHCNTG+LATA +GTALGVIR LH +
Sbjct: 124 QREDVGANRAMGAYGADWLLKRVAADRPLRVLTHCNTGALATAGWGTALGVIRELHARGQ 183
Query: 142 I 142
+
Sbjct: 184 L 184
>gi|154500222|ref|ZP_02038260.1| hypothetical protein BACCAP_03886 [Bacteroides capillosus ATCC
29799]
gi|150270954|gb|EDM98228.1| S-methyl-5-thioribose-1-phosphate isomerase [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 339
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 71/126 (56%), Gaps = 17/126 (13%)
Query: 167 LVSARPTAVNM----KRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
L ++RPTAVN+ +R AD +K A S + LIQ +++ E+D+ N+ +
Sbjct: 81 LAASRPTAVNLFWALRRMADCLK------ANGSTPEAIDV-LIQEAQAIHEEDVEMNRTL 133
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
G GA + P ++ +LTHCN GSLAT YGTALGV+RS K+ Y ETRP
Sbjct: 134 GDFGAAVV----PAHAR--ILTHCNAGSLATGGYGTALGVVRSAFNQGKVDMVYADETRP 187
Query: 283 YNQGAR 288
QGAR
Sbjct: 188 LLQGAR 193
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 50/183 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP------------- 50
+ +I +E ++L +LDQ LP + + +AI M VRGAP
Sbjct: 1 MDAIRWEGNTLYLLDQTRLPVQEDWIAYTDFRSVARAITDMVVRGAPAIGITAAYAYCLA 60
Query: 51 ---------------------------AIAIVGCLGLVVDI--KDKQFPD--NELIQLIE 79
A+ + L + D + P+ + LIQ +
Sbjct: 61 ALEFRNAPDFAAAMEQAEQVLAASRPTAVNLFWALRRMADCLKANGSTPEAIDVLIQEAQ 120
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ E+D+ N+ +G GA A++ + R+ LTHCN GSLAT YGTALGV+RS
Sbjct: 121 AIHEEDVEMNRTLGDFGA-AVVPAHARI-----LTHCNAGSLATGGYGTALGVVRSAFNQ 174
Query: 140 NKI 142
K+
Sbjct: 175 GKV 177
>gi|428315992|ref|YP_007113874.1| methylthioribose-1-phosphate isomerase [Oscillatoria nigro-viridis
PCC 7112]
gi|428239672|gb|AFZ05458.1| methylthioribose-1-phosphate isomerase [Oscillatoria nigro-viridis
PCC 7112]
Length = 353
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 70/124 (56%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L S RPTAVN+ A + + + V V+ L+++ +++ +D+ K IG
Sbjct: 88 ELLRSTRPTAVNLFWAISRMLKTAER--TSGSVEQVQKTLLEMAKTIQAEDLQTCKDIGD 145
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G + L P KLN+LTHCN G+LATA YGTALGV RS ++G + ETRP
Sbjct: 146 KGLEVL-PATP--EKLNLLTHCNAGALATAGYGTALGVFRSAWREGRLGRVFADETRPRL 202
Query: 285 QGAR 288
QGA+
Sbjct: 203 QGAK 206
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ + +++ + ++DQ LP +V+I+ ED +AIK+M VRGAPAI + G+ +
Sbjct: 8 VSPVTWKEDRVLLIDQNRLPKEYGVVEISRCEDMAEAIKTMIVRGAPAIGVAAAYGMYLG 67
Query: 64 IKDKQFPDNE-----------------------------------------------LIQ 76
++ + D L++
Sbjct: 68 AREIETGDRTEFLTKLEQVGELLRSTRPTAVNLFWAISRMLKTAERTSGSVEQVQKTLLE 127
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ +++ +D+ K IG G + L P KLN+LTHCN G+LATA YGTALGV RS
Sbjct: 128 MAKTIQAEDLQTCKDIGDKGLEVL-PATP--EKLNLLTHCNAGALATAGYGTALGVFRS 183
>gi|357053231|ref|ZP_09114330.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium
clostridioforme 2_1_49FAA]
gi|355385904|gb|EHG32949.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium
clostridioforme 2_1_49FAA]
Length = 366
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ E DYL S+RPTAVN+ A + ++++++ K V +K L + + + E
Sbjct: 81 DAFYGRFKELKDYLASSRPTAVNLFWALNRMEAAVTA-NKERDVAAIKELLFEEADKIRE 139
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI ++ IG G L +L ++ +LTHCN G+LATA+YGTA + G
Sbjct: 140 EDIQISRGIGEIGFGLLKELKKEGREIGILTHCNAGTLATAKYGTATAPMYIALEKGWPG 199
Query: 274 AA---YCTETRPYNQGAR 288
A YC ETRP QGAR
Sbjct: 200 TAMHVYCDETRPLLQGAR 217
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 48/168 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------------G 48
++ SL I+DQ LLP T K +++N E+ ++AIK ++VR G
Sbjct: 18 DRSSLDIIDQTLLPGTIKRINLNTKEEIWEAIKKLRVRGAPAIGAAAAYGIALLASGIAG 77
Query: 49 APAIAIVGCLGLVVDIKDKQFPD--------NELIQLIESMLEKDISDNK---------- 90
A G + D P N + + + E+D++ K
Sbjct: 78 DQYDAFYGRFKELKDYLASSRPTAVNLFWALNRMEAAVTANKERDVAAIKELLFEEADKI 137
Query: 91 ---------AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
IG G L +L ++ +LTHCN G+LATA+YGTA
Sbjct: 138 REEDIQISRGIGEIGFGLLKELKKEGREIGILTHCNAGTLATAKYGTA 185
>gi|373488249|ref|ZP_09578914.1| methylthioribose-1-phosphate isomerase [Holophaga foetida DSM 6591]
gi|372006574|gb|EHP07206.1| methylthioribose-1-phosphate isomerase [Holophaga foetida DSM 6591]
Length = 355
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
FP+ + E + L ++RPTAVN+ ++ A P + L+Q
Sbjct: 73 FPE--AFEDALEHAFVVLAASRPTAVNLFWGLKRMRRCWEAQAHLPPPEIAEA-LLQEAH 129
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+L +DI N+A+G +GA L D VLTHCN G+LATA +GTALGV RS A
Sbjct: 130 EVLAEDIRINRAMGAHGAALLAD------GARVLTHCNAGALATAGHGTALGVFRSAVEA 183
Query: 270 NKIGAAYCTETRPYNQGAR 288
K + ETRP+ QGAR
Sbjct: 184 GKRISVIADETRPFLQGAR 202
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 85/198 (42%), Gaps = 55/198 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++++ + + L+++DQ +LP + + ++ + I+SM VRGAPAI G+ +
Sbjct: 5 GVETLRWREGCLEMIDQRILPARFEYLAYHDAAGVAEGIRSMVVRGAPAIGCAATYGIAL 64
Query: 63 DIKDKQ--FPD----------------------------------------------NEL 74
+ + FP+ L
Sbjct: 65 EAMKYRATFPEAFEDALEHAFVVLAASRPTAVNLFWGLKRMRRCWEAQAHLPPPEIAEAL 124
Query: 75 IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+Q +L +DI N+A+G +GA L D VLTHCN G+LATA +GTALGV R
Sbjct: 125 LQEAHEVLAEDIRINRAMGAHGAALLAD------GARVLTHCNAGALATAGHGTALGVFR 178
Query: 135 S-LHGANKIVDIKDKQFP 151
S + +I I D+ P
Sbjct: 179 SAVEAGKRISVIADETRP 196
>gi|114320074|ref|YP_741757.1| translation initiation factor 2B subunit I [Alkalilimnicola
ehrlichii MLHE-1]
gi|122312092|sp|Q0AA70.1|MTNA_ALHEH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|114226468|gb|ABI56267.1| methylthioribose-1-phosphate isomerase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 346
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L SARPTAVN+ A D ++ + S L ++ E D++ N+ +G
Sbjct: 86 LARLRSARPTAVNLFWALDRMQQVVD-----SDPADPLAALEAAAVAIHEDDLTANRRMG 140
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA LI GV LTHCNTGSLAT YGTALGVIRS + A Y ETRP+
Sbjct: 141 ELGAH-LIPAGAGV-----LTHCNTGSLATGGYGTALGVIRSAWSGKGLSAVYADETRPW 194
Query: 284 NQGAR 288
QGAR
Sbjct: 195 LQGAR 199
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 50/177 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++++ ++ LK+LDQ LP + +D ++ D AI+ M VRGAPAI I G+V+
Sbjct: 6 TVRALDWQGDHLKLLDQRRLPAETVWLDCHSAADTADAIRDMVVRGAPAIGIAAAYGVVL 65
Query: 63 -----------DIKDKQFPD------------------NELIQLIES------------- 80
D D + + Q+++S
Sbjct: 66 AARAAMARRPADWPAAMAADLARLRSARPTAVNLFWALDRMQQVVDSDPADPLAALEAAA 125
Query: 81 --MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ E D++ N+ +G GA L P + VLTHCNTGSLAT YGTALGVIRS
Sbjct: 126 VAIHEDDLTANRRMGELGAH----LIP--AGAGVLTHCNTGSLATGGYGTALGVIRS 176
>gi|300122510|emb|CBK23080.2| unnamed protein product [Blastocystis hominis]
Length = 333
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 138 GANKIVDIKDKQFPD--NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS 195
GA +V ++ PD ND L+ K +YL SARPTAVN+ A K + E AS
Sbjct: 13 GAYGMVFAVKEKHPDTFNDLLQCLRDAK-EYLDSARPTAVNLMWAT---KRVIDEVESAS 68
Query: 196 PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAE 255
P N + LI+L + + ++D+ NK + +GA AL+ N NV+ HCNTG+LAT +
Sbjct: 69 PSNFYEF-LIELAQKIADEDVQINKQMAIHGA-ALVPPNS-----NVIHHCNTGALATVD 121
Query: 256 YGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
GTALGVI +G+ K + ETRP QGAR
Sbjct: 122 IGTALGVI---YGSGKNIHVWVDETRPRLQGAR 151
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 69/183 (37%)
Query: 44 MQVRGAPAIAIVGCLGLVVDIKDKQFPDNE------------------------------ 73
M +RGAPAI + G G+V +K+K PD
Sbjct: 1 MTIRGAPAIGVAGAYGMVFAVKEKH-PDTFNDLLQCLRDAKEYLDSARPTAVNLMWATKR 59
Query: 74 ----------------LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN 117
LI+L + + ++D+ NK + +GA AL+ N NV+ HCN
Sbjct: 60 VIDEVESASPSNFYEFLIELAQKIADEDVQINKQMAIHGA-ALVPPNS-----NVIHHCN 113
Query: 118 TGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
TG+LAT + GTALGVI +G+ K + + +V E L AR TA +
Sbjct: 114 TGALATVDIGTALGVI---YGSGKNIHV-------------WVDETRPRLQGARLTAWEL 157
Query: 178 KRA 180
RA
Sbjct: 158 ARA 160
>gi|161527677|ref|YP_001581503.1| aIF-2BI family translation initiation factor [Nitrosopumilus
maritimus SCM1]
gi|160338978|gb|ABX12065.1| putative translation initiation factor, aIF-2BI family
[Nitrosopumilus maritimus SCM1]
Length = 345
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+G AL V++S D + KQ L Y+ L RPTA+N+ + +
Sbjct: 57 FGLALAVLQS--------DAETKQ-----DLISYLENARKILFETRPTAINLGWGLNKI- 102
Query: 186 SSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTH 245
+ + + +K +I + M E DI NK +G+NG+ L D N ++TH
Sbjct: 103 --MDVAKHCNSIQEIKESVIAEAKKMAEDDIEINKTMGKNGS-VLFDNND-----TIMTH 154
Query: 246 CNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
CN G+LAT YGTALGVIR+ + K TETRP QG+R
Sbjct: 155 CNAGALATVAYGTALGVIRATKESGKQVKVIATETRPIQQGSR 197
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 52/188 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L+++ ++ + + ++DQ LP+ V+ ++ AIK++ VRGAPAI + G GL +
Sbjct: 3 LKTVEWKNNKVVMIDQTKLPNELVFVEFDDFNQVADAIKNLVVRGAPAIGVSGAFGLALA 62
Query: 63 ----DIKDKQ----FPDNELIQLIES---------------------------------- 80
D + KQ + +N L E+
Sbjct: 63 VLQSDAETKQDLISYLENARKILFETRPTAINLGWGLNKIMDVAKHCNSIQEIKESVIAE 122
Query: 81 ---MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
M E DI NK +G+NG+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 123 AKKMAEDDIEINKTMGKNGS-VLFDNND-----TIMTHCNAGALATVAYGTALGVIRATK 176
Query: 138 GANKIVDI 145
+ K V +
Sbjct: 177 ESGKQVKV 184
>gi|22298605|ref|NP_681852.1| methylthioribose-1-phosphate isomerase [Thermosynechococcus
elongatus BP-1]
gi|81743306|sp|Q8DK09.1|MTNA_THEEB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|22294785|dbj|BAC08614.1| translation initiation factor IF-2B alpha subunit
[Thermosynechococcus elongatus BP-1]
Length = 355
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A D + ++ + + ++ L++ +++ +D+ +AIG+NG
Sbjct: 92 LRQTRPTAVNLFWAIDRLLAAAQQ--PTPTLEELQQHLLETAQTIAREDVQTCQAIGKNG 149
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L L KL +LTHCN G+LATA YGTALGV+R+ A ++ Y ETRP QG
Sbjct: 150 ---LGVLPKTPEKLRLLTHCNAGALATAGYGTALGVVRAAWAAGRLERLYADETRPRLQG 206
Query: 287 AR 288
A+
Sbjct: 207 AK 208
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 52/188 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++ +++ ++++DQ LP +L +I + AI++M VRGAPAI + G+V+
Sbjct: 9 TIFPVVWAGDRVQLIDQTRLPEQYELREITTAAEMATAIRTMIVRGAPAIGVAAAFGMVL 68
Query: 63 DIKDKQFPDNE-----------------------------------------------LI 75
++ + D E L+
Sbjct: 69 GAREYRGSDREGFLIHLENIASQLRQTRPTAVNLFWAIDRLLAAAQQPTPTLEELQQHLL 128
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIR 134
+ +++ +D+ +AIG+NG L P+ KL +LTHCN G+LATA YGTALGV+R
Sbjct: 129 ETAQTIAREDVQTCQAIGKNGLGVL----PKTPEKLRLLTHCNAGALATAGYGTALGVVR 184
Query: 135 SLHGANKI 142
+ A ++
Sbjct: 185 AAWAAGRL 192
>gi|237755824|ref|ZP_04584423.1| S-methyl-5-thioribose-1-phosphate isomerase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692012|gb|EEP61021.1| S-methyl-5-thioribose-1-phosphate isomerase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 339
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 18/135 (13%)
Query: 160 VGEKLDY------LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ E +DY L RPTAVN+ A D +KS ++ + + + I++
Sbjct: 67 IKEGIDYIQVYERLKQTRPTAVNLFWALDRMKSIYEKYGNDLNLLLKEAKRIEV------ 120
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D N++IG G + LI K N+LTHCNTG+LATA +GTALG+IRS + +K
Sbjct: 121 EDYHANRSIGGYG-EVLIP-----KKANILTHCNTGALATAGWGTALGIIRSAYENDKDI 174
Query: 274 AAYCTETRPYNQGAR 288
Y ETRPY QG+R
Sbjct: 175 TVYVDETRPYLQGSR 189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 53/211 (25%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ + + L +++QL LPH + + D +AIK M VRGAP I IVG G
Sbjct: 4 LKDIKPLELKDDVLYVINQLKLPHELVWEKLETLADYEKAIKDMIVRGAPLIGIVGAYGF 63
Query: 61 VVDIKD-----------KQFPDNEL-----IQLIESMLEK------------------DI 86
IK+ KQ + + ++S+ EK D
Sbjct: 64 YTGIKEGIDYIQVYERLKQTRPTAVNLFWALDRMKSIYEKYGNDLNLLLKEAKRIEVEDY 123
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
N++IG G + LI P+ K N+LTHCNTG+LATA +GTALG+IRS + +K + +
Sbjct: 124 HANRSIGGYG-EVLI---PK--KANILTHCNTGALATAGWGTALGIIRSAYENDKDITV- 176
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
YV E YL +R TA +
Sbjct: 177 ------------YVDETRPYLQGSRLTAWEL 195
>gi|218527024|sp|B1XJK0.2|MTNA_SYNP2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
Length = 346
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 9/131 (6%)
Query: 162 EKLDYLVSA----RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
EKL+ + + RPTAVN+ A D V +++ + ++ ++ +++ +D++
Sbjct: 78 EKLEAIAATLRQTRPTAVNLFWAIDRVMATVQ--GATGNIPELQNLILNTAKAIHNEDLA 135
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
+AIG G A++ P KL +LTHCN G LATA YGTALGVIRS N++G Y
Sbjct: 136 TCQAIGDQGL-AVLPETP--EKLTILTHCNAGGLATAGYGTALGVIRSAWRENRLGMVYA 192
Query: 278 TETRPYNQGAR 288
ETRP QG++
Sbjct: 193 DETRPRLQGSK 203
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 88/187 (47%), Gaps = 50/187 (26%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ I++++ + ++DQ LLP K+V+I + +AI++M VRGAPAI + GL +
Sbjct: 4 SINPIVWQEDCVLLVDQTLLPLAYKVVEIKTYQAMAEAIRTMIVRGAPAIGVSAAYGLYL 63
Query: 63 DIKDKQFPDN-------------------------------------------ELIQLI- 78
K+ Q D EL LI
Sbjct: 64 GAKEIQTTDRTIFLEKLEAIAATLRQTRPTAVNLFWAIDRVMATVQGATGNIPELQNLIL 123
Query: 79 ---ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+++ +D++ +AIG G A++ P KL +LTHCN G LATA YGTALGVIRS
Sbjct: 124 NTAKAIHNEDLATCQAIGDQGL-AVLPETPE--KLTILTHCNAGGLATAGYGTALGVIRS 180
Query: 136 LHGANKI 142
N++
Sbjct: 181 AWRENRL 187
>gi|397905938|ref|ZP_10506771.1| Methylthioribose-1-phosphate isomerase [Caloramator australicus
RC3]
gi|397161041|emb|CCJ34106.1| Methylthioribose-1-phosphate isomerase [Caloramator australicus
RC3]
Length = 342
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 81/167 (48%), Gaps = 28/167 (16%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
YG LG + ++ +KI EK + + L S RPTAVN+ A +K
Sbjct: 55 YGVVLGA-KEVYSNDKI------------KFEKDMQRVFETLASTRPTAVNLFWALSRMK 101
Query: 186 SSLSEWAKASPVNTVKTRLIQLIES----MLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
S ++ +I L+E+ + +D+ NK IG GA+ L +K
Sbjct: 102 DKFY-----SALHNDNDNIITLLENEANDIFNEDLELNKKIGEYGAKLL------SNKCT 150
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LATA +GTALGVIRS K + ETRP QGAR
Sbjct: 151 VLTHCNAGALATAGWGTALGVIRSAKEMGKEIKVFADETRPLLQGAR 197
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 54/180 (30%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ II+ L +LDQ LLP K ++ N+ D + IKSM VRGAPAI I G+V+
Sbjct: 1 MKPIIWSNFKLNLLDQRLLPIEVKYIECNSFIDVAECIKSMVVRGAPAIGIAAAYGVVLG 60
Query: 64 ---------------------------------------IKDKQFP----DNE-LIQLIE 79
+KDK + DN+ +I L+E
Sbjct: 61 AKEVYSNDKIKFEKDMQRVFETLASTRPTAVNLFWALSRMKDKFYSALHNDNDNIITLLE 120
Query: 80 S----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ + +D+ NK IG GA+ L +K VLTHCN G+LATA +GTALGVIRS
Sbjct: 121 NEANDIFNEDLELNKKIGEYGAKLL------SNKCTVLTHCNAGALATAGWGTALGVIRS 174
>gi|292492452|ref|YP_003527891.1| translation initiation factor, aIF-2BI family [Nitrosococcus
halophilus Nc4]
gi|291581047|gb|ADE15504.1| translation initiation factor, aIF-2BI family [Nitrosococcus
halophilus Nc4]
Length = 349
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 17/140 (12%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNM----KRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
N + + + L L +ARPTAVN+ KR A + S+ P N L+
Sbjct: 77 NSNWKALIKTDLQDLEAARPTAVNLAWALKRMAALINGLPSD---VDPENA----LLAEA 129
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ + E+DI+ N+ +G GA ALI+ G +K VLTHCNTGSLAT +GTALGVIR +
Sbjct: 130 QRIHEEDIAANRRMGELGA-ALIE---GPAK--VLTHCNTGSLATGGFGTALGVIRYAYS 183
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+I + ETRP+ QGAR
Sbjct: 184 EGQINEVFADETRPWLQGAR 203
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 57/108 (52%), Gaps = 19/108 (17%)
Query: 70 PDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
P+N L+ + + E+DI+ N+ +G GA ALI+ VLTHCNTGSLAT +GTA
Sbjct: 121 PENALLAEAQRIHEEDIAANRRMGELGA-ALIE-----GPAKVLTHCNTGSLATGGFGTA 174
Query: 130 LGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
LGVIR + +I ++ + E +L AR TA +
Sbjct: 175 LGVIRYAYSEGQINEV-------------FADETRPWLQGARLTAWEL 209
>gi|407463937|ref|YP_006774819.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosopumilus sp. AR2]
gi|407047125|gb|AFS81877.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosopumilus sp. AR2]
Length = 353
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ + + ++ V +K +I + M ++DI NKA+G+NG
Sbjct: 93 LFATRPTAVNLGWGLEKI---MNIAKTGETVEQIKDLVISTAKKMADEDIEINKAMGKNG 149
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D N ++THCN G+LAT YGTALGVIR+ + K TETRP QG
Sbjct: 150 S-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRAARESGKNVKVIATETRPIQQG 203
Query: 287 AR 288
+R
Sbjct: 204 SR 205
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 52/189 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+++ ++ + + ++DQ LP+ V+ ++ AIK++ VRGAPAI + G GL +
Sbjct: 10 SLRTVEWKDNKVIMIDQTQLPNELVFVEYDDFNQVANAIKTLIVRGAPAIGVSGAFGLAL 69
Query: 63 -DIKDKQFPDNEL---------------------------------------------IQ 76
++ K EL I
Sbjct: 70 ASLQSKATTKEELLSDLKNARKILFATRPTAVNLGWGLEKIMNIAKTGETVEQIKDLVIS 129
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ M ++DI NKA+G+NG+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 130 TAKKMADEDIEINKAMGKNGS-VLFDDND-----TIMTHCNAGALATVAYGTALGVIRAA 183
Query: 137 HGANKIVDI 145
+ K V +
Sbjct: 184 RESGKNVKV 192
>gi|434388093|ref|YP_007098704.1| S-methyl-5-thioribose-1-phosphate isomerase [Chamaesiphon minutus
PCC 6605]
gi|428019083|gb|AFY95177.1| S-methyl-5-thioribose-1-phosphate isomerase [Chamaesiphon minutus
PCC 6605]
Length = 347
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 82/143 (57%), Gaps = 5/143 (3%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+ + D D + E L + RPTAVN+ A D ++++ + A + V + +L+
Sbjct: 66 KEIKTTDRDEFLAQLTEIGKTLRATRPTAVNLFWAIDRMEATALQCAGS--VAAIIPQLL 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + DI+ +AIG +G A++ +P +KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 124 VAAQQINSDDIATCQAIGAHGV-AVLPSSP--AKLCLLTHCNAGALATAGYGTALGVVRS 180
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGA+
Sbjct: 181 AWTQGRLARLYADETRPRLQGAK 203
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 50/174 (28%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
++ + ++DQ LP+ V+I+ VED +AI +M VRGAPAI + G+ + K+ +
Sbjct: 10 WQNDRVLLIDQNRLPNEYTYVEIDLVEDMAEAISTMIVRGAPAIGVAAAYGMYLGAKEIK 69
Query: 69 FPDNE--LIQLIE---------------------------------------------SM 81
D + L QL E +
Sbjct: 70 TTDRDEFLAQLTEIGKTLRATRPTAVNLFWAIDRMEATALQCAGSVAAIIPQLLVAAQQI 129
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
DI+ +AIG +G A++ +P +KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 130 NSDDIATCQAIGAHGV-AVLPSSP--AKLCLLTHCNAGALATAGYGTALGVVRS 180
>gi|325971770|ref|YP_004247961.1| methylthioribose-1-phosphate isomerase [Sphaerochaeta globus str.
Buddy]
gi|324027008|gb|ADY13767.1| Methylthioribose-1-phosphate isomerase [Sphaerochaeta globus str.
Buddy]
Length = 345
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI----VDIKDKQFPDNDS 155
LI L+ RV V T+ + E+ ++R + V + +Q P+ +
Sbjct: 15 LILLDQRVLPTQV-TYVTCATYEEVEFAIRDMIVRGAPAIGAVAAYGVYLALQQCPEQAA 73
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+ +L ARPTA+N+ A D + + E KA RL+ ++ E+D
Sbjct: 74 FY----QACKFLSLARPTAINLGWAIDRMLG-VYETVKAQGRPKTLERLLMEAHTIREED 128
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
I NK I R G Q + K +LTHCNTG+LATA +GTALGVI+ K
Sbjct: 129 IQTNKTISRIGNQVV------PYKATILTHCNTGALATAGWGTALGVIKQAFYDKKDIFV 182
Query: 276 YCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 183 YADETRPRFQGAR 195
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 87/207 (42%), Gaps = 57/207 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+S ++ + + L +LDQ +LP V E+ AI+ M VRGAPAI V G+
Sbjct: 3 ESFVALNFTEGKLILLDQRVLPTQVTYVTCATYEEVEFAIRDMIVRGAPAIGAVAAYGVY 62
Query: 62 VDIKDKQFPDN------------------ELIQLIESML--------------------- 82
+ ++ Q P+ L I+ ML
Sbjct: 63 LALQ--QCPEQAAFYQACKFLSLARPTAINLGWAIDRMLGVYETVKAQGRPKTLERLLME 120
Query: 83 -----EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
E+DI NK I R G Q + K +LTHCNTG+LATA +GTALGVI+
Sbjct: 121 AHTIREEDIQTNKTISRIGNQVV------PYKATILTHCNTGALATAGWGTALGVIK--- 171
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKL 164
D KD +++ ++ G +L
Sbjct: 172 --QAFYDKKDIFVYADETRPRFQGARL 196
>gi|332295647|ref|YP_004437570.1| methylthioribose-1-phosphate isomerase [Thermodesulfobium narugense
DSM 14796]
gi|332178750|gb|AEE14439.1| Methylthioribose-1-phosphate isomerase [Thermodesulfobium narugense
DSM 14796]
Length = 336
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 94/218 (43%), Gaps = 60/218 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL--- 60
+++ ++K SL +LDQ LP ++++N + +AI++++VRGAPAI I G L
Sbjct: 6 FEAMKFKKDSLLLLDQTKLPFEEVWLELSNADMIIEAIQNLRVRGAPAIGICGAFALYLS 65
Query: 61 -------------------------------------VVDIKDKQFPDNELIQLIESMLE 83
VVD K NE+ + S+
Sbjct: 66 IYNDNKLLVDEISLKREANRIKGSRPTAINLSWGVDKVVDFVGKCINLNEIFDFVYSLYL 125
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
++I N+ I NGA+ L P S +LTHCNTGSLA GTALGVIR + K+
Sbjct: 126 QEIEINEKIAINGAKVL----PEGS---ILTHCNTGSLAAPGIGTALGVIRKMFQMRKLN 178
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
+ YV E L AR T ++R A
Sbjct: 179 LV-------------YVSETRPLLQGARLTVFELERDA 203
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 170 ARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
+RPTA+N+ D V + K +N + + S+ ++I N+ I NGA+
Sbjct: 89 SRPTAINLSWGVDKVVDFV---GKCINLNEI----FDFVYSLYLQEIEINEKIAINGAKV 141
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L + ++LTHCNTGSLA GTALGVIR + K+ Y +ETRP QGAR
Sbjct: 142 L-------PEGSILTHCNTGSLAAPGIGTALGVIRKMFQMRKLNLVYVSETRPLLQGAR 193
>gi|260598823|ref|YP_003211394.1| methylthioribose-1-phosphate isomerase, partial [Cronobacter
turicensis z3032]
gi|260218000|emb|CBA32670.1| Methylthioribose-1-phosphate isomerase [Cronobacter turicensis
z3032]
Length = 213
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ LD L +ARPTAVN+ D +K +L++ A+ + RL+Q + E+
Sbjct: 75 LGQALDVLRAARPTAVNLMNNLDRMKQALTQPDFAAALGAEALRLVQEDRELCER----- 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I R G++ + PG S+L LTHCNTG LATA GTALGVI H K+ + E
Sbjct: 130 --IARAGSELVA---PG-SRL--LTHCNTGGLATAGVGTALGVIARAHEEGKVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 36/179 (20%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG-- 56
M++LQ S+ + L ILDQ LP + +N E I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVVDNKLWILDQQALPQQKNWLPADNTEALVGHIHALRVRGAPLIGLSASL 60
Query: 57 -------------CLGLVVDIKDKQFPD-----NELIQLIESMLEKD------------I 86
LG +D+ P N L ++ +++ + D +
Sbjct: 61 LLALLAEHGMTRDALGQALDVLRAARPTAVNLMNNLDRMKQALTQPDFAAALGAEALRLV 120
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+++ + A+A +L S+L LTHCNTG LATA GTALGVI H K+ ++
Sbjct: 121 QEDRELCERIARAGSELVAPGSRL--LTHCNTGGLATAGVGTALGVIARAHEEGKVANV 177
>gi|285018501|ref|YP_003376212.1| initiation factor 2b alpha/beta/delta protein [Xanthomonas
albilineans GPE PC73]
gi|283473719|emb|CBA16222.1| putative initiation_factor_2b_alpha/beta/delta protein [Xanthomonas
albilineans GPE PC73]
Length = 354
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 19/129 (14%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLS----EWAKASPVNTVKTRLIQLIESMLEKDISDN 219
L L +ARPTAVN+ A ++ +L +W + L + +++ E+D++ N
Sbjct: 94 LQRLNAARPTAVNLAWALARMRKALGGTGGDW---------RAVLAREAQAIAEEDLAAN 144
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ +G GA LI S VLTHCNTGSLATA +GTALGVIR+ +I + E
Sbjct: 145 RKMGALGA-GLI-----ASGSGVLTHCNTGSLATAGFGTALGVIRAGVAQQRIAKVFAGE 198
Query: 280 TRPYNQGAR 288
TRP+ QGAR
Sbjct: 199 TRPWLQGAR 207
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V + + +AI ++ VRGAPAI I G V+
Sbjct: 15 IRPILWTDDALELLDQRKLPFVVEHVRCTDSDQVAEAIHALAVRGAPAIGIAAGWGAVLA 74
Query: 64 IKDKQFPDNE--------------------------------------------LIQLIE 79
+ L + +
Sbjct: 75 ARAVHAETGAEALLALEPALQRLNAARPTAVNLAWALARMRKALGGTGGDWRAVLAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ E+D++ N+ +G GA LI S VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRKMGALGA-GLI-----ASGSGVLTHCNTGSLATAGFGTALGVIRAGVAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D ++++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIEATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|298490758|ref|YP_003720935.1| translation initiation factor ['Nostoc azollae' 0708]
gi|298232676|gb|ADI63812.1| translation initiation factor, aIF-2BI family ['Nostoc azollae'
0708]
Length = 344
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 89/180 (49%), Gaps = 52/180 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L ++++ +S+ ++DQ LP+ +V+I+ ED +AI++M VRGAPAI + G+ +
Sbjct: 2 LYPVVWKNNSVLLIDQTRLPNEYAVVEIHRSEDMAEAIRTMIVRGAPAIGVAAAYGIYLG 61
Query: 64 IKDKQFPDNE--------LIQLIES--------------------------------MLE 83
++ + D + + QL+ S +LE
Sbjct: 62 AREIETSDRQEFLHRLEKVAQLLRSTRTTAVNLFWAIGRMMQTAYRSLGTIAEIKQILLE 121
Query: 84 -------KDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
+DI + IG +G +AL P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 122 TAQTINAEDIQTCQQIGDHGLEAL----PKTPEKLTILTHCNAGALATAGYGTALGVVRS 177
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S R TAVN+ A + + + + +K L++ +++ +DI + IG +G
Sbjct: 84 LRSTRTTAVNLFWAIGRMMQT--AYRSLGTIAEIKQILLETAQTINAEDIQTCQQIGDHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+AL P KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 142 LEALPK-TP--EKLTILTHCNAGALATAGYGTALGVVRSAWREGRLTRVFADETRPRLQG 198
Query: 287 AR 288
A+
Sbjct: 199 AK 200
>gi|190575029|ref|YP_001972874.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia K279a]
gi|218526939|sp|B2FKI7.1|MTNA_STRMK RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|190012951|emb|CAQ46583.1| putative methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia K279a]
gi|456736579|gb|EMF61305.1| Methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia EPM1]
Length = 354
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 19/151 (12%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPV 197
++ +D Q D + + L L ++RPTAVN+ A ++ L ++W
Sbjct: 72 VLAARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADW------ 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
K +L +++ E+D++ N+ +G GA LI+ GV LTHCNTGSLATA +G
Sbjct: 126 ---KAKLEAEAQAIAEEDLAANRHMGALGA-GLIEAGSGV-----LTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ ++I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQHRIARVFAGETRPWLQGAR 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDEVAAAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
+D Q D +Q +E L++
Sbjct: 75 ARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADWKAKLEAEAQ 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA LI+ VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIEAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|354567519|ref|ZP_08986688.1| Methylthioribose-1-phosphate isomerase [Fischerella sp. JSC-11]
gi|353542791|gb|EHC12252.1| Methylthioribose-1-phosphate isomerase [Fischerella sp. JSC-11]
Length = 353
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + E V+ +K L Q +++ +D+ + IG NG
Sbjct: 90 LRSTRPTAVNLFWAISRMMKVAYE--TIGTVDEIKKALFQTAQAINAEDLQTCQDIGDNG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+AL PG +L +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 148 LKAL-PTQPG--QLTLLTHCNAGALATAGYGTALGVVRSAWREGRLARLFADETRPRLQG 204
Query: 287 AR 288
A+
Sbjct: 205 AK 206
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---- 62
II+ S+ ++DQ LP+ V+I+ ED AIK+M VRGAPAI + G+ +
Sbjct: 11 IIWHNDSVSLIDQTRLPNEYAFVEISRSEDMAVAIKTMIVRGAPAIGVAAAYGIYLGARE 70
Query: 63 ---DIKDKQFPDNE----------------------------------------LIQLIE 79
D +D+ D E L Q +
Sbjct: 71 IDTDNRDEFLQDLENVAQMLRSTRPTAVNLFWAISRMMKVAYETIGTVDEIKKALFQTAQ 130
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ + IG NG +AL + +L +LTHCN G+LATA YGTALGV+RS
Sbjct: 131 AINAEDLQTCQDIGDNGLKAL---PTQPGQLTLLTHCNAGALATAGYGTALGVVRS 183
>gi|390961928|ref|YP_006425762.1| translation initiation factor IF-2 [Thermococcus sp. CL1]
gi|390520236|gb|AFL95968.1| translation initiation factor IF-2B subunit beta [Thermococcus sp.
CL1]
Length = 356
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 71/124 (57%), Gaps = 8/124 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A + VK + E + SP++ +K+ ++ + + ++D+ N +G
Sbjct: 94 DRLKNTRPTAVNLFWALNRVKKLVEEHLE-SPLDEIKSMIVAEAQRIADEDVEANLRMGH 152
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+AL + NVLTHCN GSLAT + GT V+R +H + + ETRP
Sbjct: 153 YGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVIHRDGTLKLLWVDETRPVL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ YE+ + ++DQ LLP +++++ V++ AI +M+VRG
Sbjct: 15 RSVRYERGKVIMIDQALLPREFRMIELTTVDEVADAIITMKVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQF--PDNELIQLI-- 78
A+ + L V + ++ P +E+ +I
Sbjct: 75 DTSKAKTKDEFMDGFYRAYDRLKNTRPTAVNLFWALNRVKKLVEEHLESPLDEIKSMIVA 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+AL + NVLTHCN GSLAT + GT V+R +
Sbjct: 135 EAQRIADEDVEANLRMGHYGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVI 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|317050345|ref|YP_004111461.1| translation initiation factor, aIF-2BI family [Desulfurispirillum
indicum S5]
gi|316945429|gb|ADU64905.1| translation initiation factor, aIF-2BI family [Desulfurispirillum
indicum S5]
Length = 347
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG + +L + +S+ + + L ++RPTAVN+ A +
Sbjct: 56 AAYGVYLGALEALK--------------NQESISHTMEQVFALLAASRPTAVNLFWAIEK 101
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
++ A P + L++ + D+ N+ +G GA L + VL
Sbjct: 102 MRRVSERHMTADP-QIWRQALLEEALRIHADDVESNRRMGAYGAPLL------PAGGGVL 154
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA YGTALGVIRS A + Y TETRP+ QGAR
Sbjct: 155 THCNAGALATAGYGTALGVIRSAVSAGRGIQVYATETRPFLQGAR 199
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 87/211 (41%), Gaps = 66/211 (31%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD----IKDKQF 69
L +LDQ +LPH + + + AI +M VRGAPAI + G+ + +K+++
Sbjct: 14 LHLLDQRILPHQTAYIRCRTHGEVADAITTMVVRGAPAIGVAAAYGVYLGALEALKNQES 73
Query: 70 PDNELIQLI------------------------------------ESMLEK-------DI 86
+ + Q+ +++LE+ D+
Sbjct: 74 ISHTMEQVFALLAASRPTAVNLFWAIEKMRRVSERHMTADPQIWRQALLEEALRIHADDV 133
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
N+ +G GA L + VLTHCN G+LATA YGTALGVIRS A +
Sbjct: 134 ESNRRMGAYGAPLL------PAGGGVLTHCNAGALATAGYGTALGVIRSAVSAGR----- 182
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
++ Y E +L AR TA +
Sbjct: 183 --------GIQVYATETRPFLQGARLTAFEL 205
>gi|424669342|ref|ZP_18106367.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia Ab55555]
gi|401071413|gb|EJP79924.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia Ab55555]
Length = 354
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 83/151 (54%), Gaps = 19/151 (12%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPV 197
++ +D Q D + + L L ++RPTAVN+ A ++ L ++W
Sbjct: 72 VLAARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADW------ 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
K +L +++ E+D++ N+ +G GA LI+ GV LTHCNTGSLATA +G
Sbjct: 126 ---KAKLEAEAQAIAEEDLAANRHMGALGA-GLIEAGSGV-----LTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ ++I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQHRIARVFAGETRPWLQGAR 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDEVAAAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
+D Q D +Q +E L++
Sbjct: 75 ARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADWKAKLEAEAQ 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA LI+ VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIEAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|359461734|ref|ZP_09250297.1| methylthioribose-1-phosphate isomerase [Acaryochloris sp. CCMEE
5410]
Length = 355
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A D + + P++ ++ +L+ + + D+ +AIG +G
Sbjct: 91 LKATRPTAVNLFWAVDRMLKVARQ--TLGPISQIQDQLLTTAQEIGADDVRTCQAIGNHG 148
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L +P KL +LTHCN G+LATA YGTALGV+RS A ++ Y ETRP QG
Sbjct: 149 LSVLPK-DP--EKLCLLTHCNAGALATAGYGTALGVVRSAWTAGRLARVYADETRPRLQG 205
Query: 287 AR 288
A+
Sbjct: 206 AK 207
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---- 62
+++ ++++DQ LP +V+I ED AIK+M VRGAPAI + G+ +
Sbjct: 12 VVWRGDHVELIDQTRLPQQFSVVEIRRSEDMATAIKTMIVRGAPAIGVAAAYGMYLGSCE 71
Query: 63 ---DIKDKQFPD----------------------------------------NELIQLIE 79
D +D + ++L+ +
Sbjct: 72 ITTDNRDGFLSELVGVGNQLKATRPTAVNLFWAVDRMLKVARQTLGPISQIQDQLLTTAQ 131
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ D+ +AIG +G L +P KL +LTHCN G+LATA YGTALGV+RS A
Sbjct: 132 EIGADDVRTCQAIGNHGLSVLPK-DPE--KLCLLTHCNAGALATAGYGTALGVVRSAWTA 188
Query: 140 NKIVDI 145
++ +
Sbjct: 189 GRLARV 194
>gi|289669582|ref|ZP_06490657.1| methylthioribose-1-phosphate isomerase, partial [Xanthomonas
campestris pv. musacearum NCPPB 4381]
Length = 291
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L+ A +
Sbjct: 68 GWGVVLAARDIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLA--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + + ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHLHCDSSDTVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|289663148|ref|ZP_06484729.1| methylthioribose-1-phosphate isomerase [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 354
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L+ A +
Sbjct: 68 GWGVVLAARDIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLA--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + + ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHLHCDSSDTVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|258514472|ref|YP_003190694.1| translation initiation factor, aIF-2BI family [Desulfotomaculum
acetoxidans DSM 771]
gi|257778177|gb|ACV62071.1| translation initiation factor, aIF-2BI family [Desulfotomaculum
acetoxidans DSM 771]
Length = 345
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
+L + RPTAVN+ A D + +++ A A + L++ + +D+ N+ +GR
Sbjct: 82 FLKATRPTAVNLAWAVDRMLGVMTQ-AGALGAEDLSRVLLEEAHKIHCEDVESNRRMGRY 140
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G + + D K +LTHCN G+LATA +GTALGVIR+ A K + Y ETRP Q
Sbjct: 141 GQELVPD------KAGILTHCNAGALATAGFGTALGVIRAACEAGKQVSVYADETRPLLQ 194
Query: 286 GAR 288
GAR
Sbjct: 195 GAR 197
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 47/94 (50%), Gaps = 19/94 (20%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
+D+ N+ +GR G + + D K +LTHCN G+LATA +GTALGVIR+ A K V
Sbjct: 129 EDVESNRRMGRYGQELVPD------KAGILTHCNAGALATAGFGTALGVIRAACEAGKQV 182
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ Y E L AR TA M
Sbjct: 183 SV-------------YADETRPLLQGARLTAWEM 203
>gi|384427507|ref|YP_005636866.1| translation initiation factor IF-2 [Xanthomonas campestris pv.
raphani 756C]
gi|341936609|gb|AEL06748.1| translation initiation factor IF-2B alpha subunit [Xanthomonas
campestris pv. raphani 756C]
Length = 354
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A A P + L + +++ ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVL---AAAGP--DWRDVLAREAQAIADEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 113/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKD------------------------------------------KQFPD--NELIQLIE 79
++ PD + L + +
Sbjct: 75 AREIAADSGSEALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRISKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|163783477|ref|ZP_02178468.1| cofactor-independent phosphoglycerate mutase [Hydrogenivirga sp.
128-5-R1-1]
gi|159881241|gb|EDP74754.1| cofactor-independent phosphoglycerate mutase [Hydrogenivirga sp.
128-5-R1-1]
Length = 331
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 49/206 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++ + L +LDQ LP +++ + +AIK M VRGAPAI V G ++
Sbjct: 7 VKAFYWRGDHLLLLDQRRLPSEEVWLELRDHIGVAEAIKGMAVRGAPAIGCVAAYGFLLG 66
Query: 64 IKDKQFPDN-------------ELIQLIESMLE-----------------KDISDNKAIG 93
IK + D L ++ M+ +D N+ IG
Sbjct: 67 IKAGEKSDRVYDTLKNTRPTAYNLFWALDRMMSALSSGRDLEEEAKSIEEEDYRANRRIG 126
Query: 94 RNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDN 153
G ++L P ++ +LTHCNTG+LATA +GTALGVIRS H + K V++
Sbjct: 127 ELG----MELVPEGAR--ILTHCNTGALATAGWGTALGVIRSAHHSGKKVEV-------- 172
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKR 179
+V E YL AR TA + +
Sbjct: 173 -----WVDETRPYLQGARLTAWELMK 193
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 16/124 (12%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTA N+ A D + S+LS L + +S+ E+D N+ IG
Sbjct: 78 DTLKNTRPTAYNLFWALDRMMSALSS----------GRDLEEEAKSIEEEDYRANRRIGE 127
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G ++L P ++ +LTHCNTG+LATA +GTALGVIRS H + K + ETRPY
Sbjct: 128 LG----MELVPEGAR--ILTHCNTGALATAGWGTALGVIRSAHHSGKKVEVWVDETRPYL 181
Query: 285 QGAR 288
QGAR
Sbjct: 182 QGAR 185
>gi|330509090|ref|YP_004385518.1| methylthioribose-1-phosphate isomerase [Methanosaeta concilii GP6]
gi|328929898|gb|AEB69700.1| methylthioribose-1-phosphate isomerase [Methanosaeta concilii GP6]
Length = 338
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 9/124 (7%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + ++RPTA+N+ D +L ++ ++ E + E+DI N+AIG+
Sbjct: 85 DMIRNSRPTAINLSWGVDR---ALQAARGGESTEEIREAALRSAEGIAEEDIRVNRAIGK 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
NGA+ L D + +LTHCN G LA +GTALGV+RS A K Y ETRP +
Sbjct: 142 NGAKLLEDGD------TILTHCNAGRLACVGWGTALGVVRSAVEAGKKIEVYACETRPLH 195
Query: 285 QGAR 288
QG+R
Sbjct: 196 QGSR 199
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
E + E+DI N+AIG+NGA+ L D + +LTHCN G LA +GTALGV+RS
Sbjct: 126 EGIAEEDIRVNRAIGKNGAKLLEDGD------TILTHCNAGRLACVGWGTALGVVRSAVE 179
Query: 139 ANKIVDI 145
A K +++
Sbjct: 180 AGKKIEV 186
>gi|188996615|ref|YP_001930866.1| translation initiation factor, aIF-2BI family [Sulfurihydrogenibium
sp. YO3AOP1]
gi|218526940|sp|B2V8N9.1|MTNA_SULSY RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|188931682|gb|ACD66312.1| translation initiation factor, aIF-2BI family [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 339
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 53/213 (24%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ + + L +++QL LPH + + D +AIK M VRGAP I IVG G
Sbjct: 4 LKDIKPLELKDDVLYVINQLKLPHELVWEKLETLADYEKAIKDMIVRGAPLIGIVGAYGF 63
Query: 61 VVDIKD-----------KQFPDNEL-----IQLIESMLEK------------------DI 86
IK+ KQ + + ++S+ EK D
Sbjct: 64 YTGIKEGIDYIQVYERLKQTRPTAVNLFWALDRMKSIYEKYGNDLNLLLKEAKRIEVEDY 123
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
N++IG G + LI P+ K N+LTHCNTG+LATA +GTALG+IRS
Sbjct: 124 HANRSIGGYG-EVLI---PK--KANILTHCNTGALATAGWGTALGIIRS----------- 166
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
F ++ + YV E YL +R TA + R
Sbjct: 167 --AFENDKDITVYVDETRPYLQGSRLTAWELLR 197
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 18/135 (13%)
Query: 160 VGEKLDY------LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ E +DY L RPTAVN+ A D +KS ++ + + + I++
Sbjct: 67 IKEGIDYIQVYERLKQTRPTAVNLFWALDRMKSIYEKYGNDLNLLLKEAKRIEV------ 120
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D N++IG G + LI K N+LTHCNTG+LATA +GTALG+IRS +K
Sbjct: 121 EDYHANRSIGGYG-EVLIP-----KKANILTHCNTGALATAGWGTALGIIRSAFENDKDI 174
Query: 274 AAYCTETRPYNQGAR 288
Y ETRPY QG+R
Sbjct: 175 TVYVDETRPYLQGSR 189
>gi|317153827|ref|YP_004121875.1| translation initiation factor, aIF-2BI family [Desulfovibrio
aespoeensis Aspo-2]
gi|316944078|gb|ADU63129.1| translation initiation factor, aIF-2BI family [Desulfovibrio
aespoeensis Aspo-2]
Length = 346
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
KLD + ARPTAVN++ A ++ E S ++ + T + + E DI+ +AI
Sbjct: 81 KLDQIEKARPTAVNLRWAVREMRRVWQEAGDVS-LDALLTVWLARAREIHEDDIAMCEAI 139
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GR G + D + ++THCN G+LATA YGTALGV+R K + ETRP
Sbjct: 140 GRFGGALMDDGD------TIMTHCNAGALATAGYGTALGVVRGAVDQGKKVSVIANETRP 193
Query: 283 YNQGAR 288
+ QGAR
Sbjct: 194 FLQGAR 199
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 74/173 (42%), Gaps = 53/173 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV---GCL-------G 59
+K +L +LDQ LP+ + + +D A+ M VRGAPAI + GC G
Sbjct: 10 DKDALVLLDQRYLPNREEWFECRTTDDICFALVVMVVRGAPAIGVTAAYGCYLAGREVQG 69
Query: 60 LVVDIK----------DKQFP--------------------DNELIQLIESML------- 82
+ D K +K P D L L+ L
Sbjct: 70 MDGDWKANLNAKLDQIEKARPTAVNLRWAVREMRRVWQEAGDVSLDALLTVWLARAREIH 129
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E DI+ +AIGR G + D + ++THCN G+LATA YGTALGV+R
Sbjct: 130 EDDIAMCEAIGRFGGALMDDGD------TIMTHCNAGALATAGYGTALGVVRG 176
>gi|384564828|ref|ZP_10011932.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
glauca K62]
gi|384520682|gb|EIE97877.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
glauca K62]
Length = 342
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 68/124 (54%), Gaps = 10/124 (8%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L ARPTAVN++ V+ +L+ + + P + L +ML++D N+A R
Sbjct: 84 DRLARARPTAVNLRH---GVERALA-FVEHGPDAVLAEAL-----AMLDEDERVNRAASR 134
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ A L+ P L VLTHCNTG LAT +GTALG IR LH +I ETRP
Sbjct: 135 HAADLLLSRCPD-RPLRVLTHCNTGRLATVAWGTALGTIRHLHAEGRIDVVLADETRPLL 193
Query: 285 QGAR 288
QG+R
Sbjct: 194 QGSR 197
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 70 PDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
PD L + + +ML++D N+A R+ A L+ P L VLTHCNTG LAT +GTA
Sbjct: 111 PDAVLAEAL-AMLDEDERVNRAASRHAADLLLSRCPD-RPLRVLTHCNTGRLATVAWGTA 168
Query: 130 LGVIRSLHGANKI-VDIKDKQFP 151
LG IR LH +I V + D+ P
Sbjct: 169 LGTIRHLHAEGRIDVVLADETRP 191
>gi|381393653|ref|ZP_09919372.1| methylthioribose-1-phosphate isomerase [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379330547|dbj|GAB54505.1| methylthioribose-1-phosphate isomerase [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 350
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSA-RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
EK D L+ A RPTAVN+ A D +K L+ +K K L+ + + E+DI NK
Sbjct: 82 EKADVLLRATRPTAVNLFWALDEMKR-LAPVSKFETQTQYKAGLLSAAQQLAEQDIQINK 140
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
I ++ Q L P + + + HCNTGSLAT +YGTALGVIR H + ET
Sbjct: 141 KIAQHAMQ----LMPK-NAVTFIHHCNTGSLATVDYGTALGVIRMAHEQGLATTVFVDET 195
Query: 281 RPYNQGAR 288
RP QGA+
Sbjct: 196 RPRLQGAK 203
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 81/187 (43%), Gaps = 55/187 (29%)
Query: 1 MKSLQSI--IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
MK+ SI I +L++LDQ +LP D + D AIK+M VRGAP I +
Sbjct: 1 MKNYTSIEWIDANKTLRLLDQSVLPAKVVYNDYTSAGDIATAIKNMVVRGAPLIGVTAAY 60
Query: 59 GLVVD-IKDKQFPDNELIQLIE-------------------------------------- 79
GLVV+ + K +EL LIE
Sbjct: 61 GLVVESFRVKAADISELADLIEKADVLLRATRPTAVNLFWALDEMKRLAPVSKFETQTQY 120
Query: 80 ---------SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
+ E+DI NK I ++ Q L P+ + + + HCNTGSLAT +YGTAL
Sbjct: 121 KAGLLSAAQQLAEQDIQINKKIAQHAMQ----LMPK-NAVTFIHHCNTGSLATVDYGTAL 175
Query: 131 GVIRSLH 137
GVIR H
Sbjct: 176 GVIRMAH 182
>gi|194366352|ref|YP_002028962.1| methylthioribose-1-phosphate isomerase [Stenotrophomonas
maltophilia R551-3]
gi|218526938|sp|B4SP84.1|MTNA_STRM5 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|194349156|gb|ACF52279.1| translation initiation factor, aIF-2BI family [Stenotrophomonas
maltophilia R551-3]
Length = 354
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 19/151 (12%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLS----EWAKASPV 197
++ +D Q D + + L L ++RPTAVN+ A ++ LS +W
Sbjct: 72 VLAARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLSAAGADW------ 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
K L +++ E+D++ N+ +G GA LI+ GV LTHCNTGSLATA +G
Sbjct: 126 ---KALLEAEAQAIAEEDLAANRHMGALGA-GLIEAGSGV-----LTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ ++I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQHRIARVFAGETRPWLQGAR 207
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ +I ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGEALQLLDQRKLPFVVEHVVCHDSDEVAASIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
+D Q D +Q +E L++
Sbjct: 75 ARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLSAAGADWKALLEAEAQ 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA LI+ VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIEAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|116753680|ref|YP_842798.1| translation initiation factor IF-2B subunit alpha [Methanosaeta
thermophila PT]
gi|116665131|gb|ABK14158.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanosaeta thermophila PT]
Length = 339
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 73/140 (52%), Gaps = 9/140 (6%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
+F + D + + + + ++RPTAVN+ D V + E A V + R
Sbjct: 68 KFQERDGVLHEMEIAAEMIKNSRPTAVNLSWGVDRVLRAAQEGEIADEVREIALREA--- 124
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
E + E+D+ NK IGR+GA+ L D + +VLTHCN G LA +GTALGVIR
Sbjct: 125 ERIAEEDLIINKMIGRHGAKLLNDGD------SVLTHCNAGRLACVGWGTALGVIRQAVM 178
Query: 269 ANKIGAAYCTETRPYNQGAR 288
K Y ETRP NQG+R
Sbjct: 179 DGKEIHVYACETRPLNQGSR 198
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E + E+D+ NK IGR+GA+ L D + +VLTHCN G LA +GTALGVIR
Sbjct: 125 ERIAEEDLIINKMIGRHGAKLLNDGD------SVLTHCNAGRLACVGWGTALGVIR 174
>gi|220926465|ref|YP_002501767.1| translation initiation factor, aIF-2BI family [Methylobacterium
nodulans ORS 2060]
gi|254813653|sp|B8IEX1.1|MTNA_METNO RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|219951072|gb|ACL61464.1| translation initiation factor, aIF-2BI family [Methylobacterium
nodulans ORS 2060]
Length = 364
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 23/165 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG ALG+ R P + LE+ L + RPTAVN++ A +
Sbjct: 61 TAAYGLALGLRRD---------------PSDAGLERIAA----MLAATRPTAVNLRWALE 101
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+ L + P +T + + E+D+++ +AIG +GA+ + ++NV
Sbjct: 102 RLSGIL----RPLPPDTRAPQAFAEAGRIAEEDVANCRAIGEHGARLIAQTAAKGRRVNV 157
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
LTHCN G LAT ++GTAL I H A + ETRP NQGA
Sbjct: 158 LTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRPRNQGA 202
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 44/180 (24%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNELI 75
++DQ LP ++ + E+A +AI++M VRGAP I + GL + ++ P + +
Sbjct: 22 VIDQTRLPFAFEIRRLTTAEEAAEAIRTMVVRGAPLIGVTAAYGLALGLRRD--PSDAGL 79
Query: 76 QLIESML-----------------------------------------EKDISDNKAIGR 94
+ I +ML E+D+++ +AIG
Sbjct: 80 ERIAAMLAATRPTAVNLRWALERLSGILRPLPPDTRAPQAFAEAGRIAEEDVANCRAIGE 139
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFPDN 153
+GA+ + + ++NVLTHCN G LAT ++GTAL I H A V + D+ P N
Sbjct: 140 HGARLIAQTAAKGRRVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRPRN 199
>gi|407696057|ref|YP_006820845.1| methylthioribose-1-phosphate isomerase (Methionine salvage pathway)
[Alcanivorax dieselolei B5]
gi|407253395|gb|AFT70502.1| Methylthioribose-1-phosphate isomerase (Methionine salvage pathway)
[Alcanivorax dieselolei B5]
Length = 345
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
++ ++ D SL + + L ++RPTAVN+ A D ++ + + + A+ + L
Sbjct: 63 LEAQRLGDQASLAA-LAPAFEVLAASRPTAVNLFWALDRLRQAAGDLSGAA----LARHL 117
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
+ E + D++ N+ +G G + L P ++ V THCNTG+LAT +GTALG+IR
Sbjct: 118 SEQAERLHRDDLAANRRLGEAG----LALLPEGAR--VYTHCNTGALATGGHGTALGIIR 171
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
S A ++ + Y ETRP+ QGAR
Sbjct: 172 SAWEAGRLRSVYAGETRPWQQGAR 195
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 61/214 (28%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD-- 63
+I + +L +LDQ LP + + I N DA AI+ M VRGAPAI I GL ++
Sbjct: 7 AIRWHDTALDLLDQRALPADTTWLRITNARDAAHAIREMVVRGAPAIGITAGYGLALEAQ 66
Query: 64 -IKDKQ-----FPDNELI----------------------------------QLIESMLE 83
+ D+ P E++ + E +
Sbjct: 67 RLGDQASLAALAPAFEVLAASRPTAVNLFWALDRLRQAAGDLSGAALARHLSEQAERLHR 126
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
D++ N+ +G G + L P ++ V THCNTG+LAT +GTALG+IRS A ++
Sbjct: 127 DDLAANRRLGEAG----LALLPEGAR--VYTHCNTGALATGGHGTALGIIRSAWEAGRLR 180
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ Y GE + AR T+ +
Sbjct: 181 SV-------------YAGETRPWQQGARLTSWEL 201
>gi|288574982|ref|ZP_06393339.1| translation initiation factor, aIF-2BI family [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288570723|gb|EFC92280.1| translation initiation factor, aIF-2BI family [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 340
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 15/122 (12%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L+S RPTAVN++ A + + + ASPV V + ++ +D++ NKAIG NG
Sbjct: 76 LMSTRPTAVNLRWALERMDRVVG----ASPVAVVDEAV-----AIHREDLNINKAIGENG 126
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + D NV+THCN G++ATA +GTALGV+RS + K Y ETRP QG
Sbjct: 127 ANLIPD------GANVVTHCNAGAIATAGWGTALGVLRSCVRSGKRIRVYADETRPRLQG 180
Query: 287 AR 288
R
Sbjct: 181 GR 182
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------ 62
+ + L +LDQ LP V E+ AIKSM VRGAPAI + G+ +
Sbjct: 8 WNEGELSLLDQTKLPWEVSFVRCKTCEEVASAIKSMVVRGAPAIGVAAAYGMALARLAGE 67
Query: 63 DIKDKQF------PDN-ELIQLIESM------------------LEKDISDNKAIGRNGA 97
D+ + +F P L +E M +D++ NKAIG NGA
Sbjct: 68 DMLEARFLLMSTRPTAVNLRWALERMDRVVGASPVAVVDEAVAIHREDLNINKAIGENGA 127
Query: 98 QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ D NV+THCN G++ATA +GTALGV+RS
Sbjct: 128 NLIPD------GANVVTHCNAGAIATAGWGTALGVLRS 159
>gi|156740180|ref|YP_001430309.1| eIF-2B alpha/beta/delta-like protein [Roseiflexus castenholzii DSM
13941]
gi|218526929|sp|A7NFR2.1|MTNA_ROSCS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|156231508|gb|ABU56291.1| eIF-2B alpha/beta/delta-related uncharacterized protein
[Roseiflexus castenholzii DSM 13941]
Length = 354
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN+ A V+ + A+P NT+ ++ ++L +D++ AIGR+G AL
Sbjct: 95 RPTAVNLSWATRRVQEKVRRLIPAAP-NTLARAALEEAHAILAEDLAMCYAIGRHGV-AL 152
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
I + +VLTHCN G LATA YGTAL IR H + Y ETRP+ QGAR
Sbjct: 153 IP-----PRGHVLTHCNAGGLATAGYGTALAPIRMAHEQGRPIHVYVDETRPFLQGAR 205
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 77/230 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC----- 57
+ +++ +E + ++DQ LLP+ + +V VE+ +AI++MQ+RGAPAI GC
Sbjct: 4 AFRTVWWEAGQVCLIDQRLLPNETSVVRCTTVEEVARAIRTMQIRGAPAI---GCAAAYG 60
Query: 58 -----------------------LGLVVDIKDKQFP------------DNELIQLI---- 78
L I D Q P ++ +LI
Sbjct: 61 MALAAHHAASTATDGDHQQVYDQLAAAKTILDAQRPTAVNLSWATRRVQEKVRRLIPAAP 120
Query: 79 -----------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYG 127
++L +D++ AIGR+G ALI + +VLTHCN G LATA YG
Sbjct: 121 NTLARAALEEAHAILAEDLAMCYAIGRHGV-ALIP-----PRGHVLTHCNAGGLATAGYG 174
Query: 128 TALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
TAL IR H + + + YV E +L AR TA +
Sbjct: 175 TALAPIRMAHEQGRPIHV-------------YVDETRPFLQGARLTAWEL 211
>gi|428224501|ref|YP_007108598.1| methylthioribose-1-phosphate isomerase [Geitlerinema sp. PCC 7407]
gi|427984402|gb|AFY65546.1| methylthioribose-1-phosphate isomerase [Geitlerinema sp. PCC 7407]
Length = 353
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D+ + + L RPTAVN+ A + + + PV+ +K L++ + +
Sbjct: 75 DRDAFLERLEAVAQQLRETRPTAVNLFWAIERMLRVARQ--TVGPVSQIKAALLETAQQI 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D+ +AIG +G L KL +LTHCN G+LATA YGTALGV+RS +
Sbjct: 133 HAEDLQTCQAIGDHGLSVLPSTP---DKLRLLTHCNAGALATAGYGTALGVVRSAWREGR 189
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGA+
Sbjct: 190 LERVYADETRPRLQGAK 206
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+++ + ++++DQ LP V+I ED AIK+M VRGAPAI + G+ + ++
Sbjct: 11 VLWYQDHVRLIDQTRLPAEYTFVEIRRYEDMAHAIKTMIVRGAPAIGVAAAYGVYLGSQE 70
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
D + L IE ML
Sbjct: 71 IHIDDRDAFLERLEAVAQQLRETRPTAVNLFWAIERMLRVARQTVGPVSQIKAALLETAQ 130
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G L L KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 131 QIHAEDLQTCQAIGDHG---LSVLPSTPDKLRLLTHCNAGALATAGYGTALGVVRS 183
>gi|390990026|ref|ZP_10260318.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
gi|372555276|emb|CCF67293.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas axonopodis
pv. punicae str. LMG 859]
Length = 354
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|21242380|ref|NP_641962.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
citri str. 306]
gi|81803309|sp|Q8PM04.1|MTNA_XANAC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|21107818|gb|AAM36498.1| initiation factor eIF-2B [Xanthomonas axonopodis pv. citri str.
306]
Length = 354
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T + + D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELHQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|325928152|ref|ZP_08189361.1| methylthioribose-1-phosphate isomerase [Xanthomonas perforans
91-118]
gi|325541448|gb|EGD12981.1| methylthioribose-1-phosphate isomerase [Xanthomonas perforans
91-118]
Length = 354
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDTVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|418517872|ref|ZP_13084029.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418519898|ref|ZP_13085949.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704558|gb|EKQ63040.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410705455|gb|EKQ63928.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 354
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVVHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|84623942|ref|YP_451314.1| methylthioribose-1-phosphate isomerase [Xanthomonas oryzae pv.
oryzae MAFF 311018]
gi|161898992|ref|YP_201046.2| methylthioribose-1-phosphate isomerase [Xanthomonas oryzae pv.
oryzae KACC 10331]
gi|188576359|ref|YP_001913288.1| methylthioribose-1-phosphate isomerase [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|123521967|sp|Q2P337.1|MTNA_XANOM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526942|sp|B2SIW1.1|MTNA_XANOP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218527022|sp|Q5H060.2|MTNA_XANOR RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|84367882|dbj|BAE69040.1| initiation factor eIF-2B [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520811|gb|ACD58756.1| IDI2 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 354
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAGADWRAVIAREAQAIA---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V + + +AI S+ VRGAPAI I G+ +
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALA 74
Query: 64 IKDKQFPD-NELIQLIESMLEK------------------------DISDNKAIGRNGAQ 98
+D D N +Q +E L + +D +A+ AQ
Sbjct: 75 ARDIAADDGNAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWRAVIAREAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 135 AIADEDLAANRHMGALGAALIAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +K+ L+
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKSGLV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|78047227|ref|YP_363402.1| methylthioribose-1-phosphate isomerase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123585396|sp|Q3BV11.1|MTNA_XANC5 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|78035657|emb|CAJ23348.1| initiation factor eIF-2B [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 354
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRIAKVFAGETRPWLQGAR 207
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|225872000|ref|YP_002753454.1| methylthioribose-1-phosphate isomerase [Acidobacterium capsulatum
ATCC 51196]
gi|225791678|gb|ACO31768.1| methylthioribose-1-phosphate isomerase [Acidobacterium capsulatum
ATCC 51196]
Length = 352
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 87/168 (51%), Gaps = 21/168 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A G ALGV +S A + D+ P+ + + + L + RPTAVN+ A
Sbjct: 53 SAAMGVALGVKQS--PATTVADLT----PEFEQICRV-------LAATRPTAVNLFWAIA 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIES--MLEKDISDNKAIGRNGAQALIDLNPGVSKL 240
++ + + ++ + R I + E+ M E+DI+ + +G+NGA+ L
Sbjct: 100 RMREVYQKLSAKPGISIPEIREILIAEANKMYEEDIASCREMGKNGAELLPRSG------ 153
Query: 241 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LAT YGTALGVIR+ A Y ETRP+ QGAR
Sbjct: 154 GVLTHCNAGALATCGYGTALGVIRAAVEAGAEIQVYADETRPFLQGAR 201
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 87/225 (38%), Gaps = 70/225 (31%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++ + + ++ LDQ LP V ++ I +M VRGAPAI + +G+ +
Sbjct: 2 IPTLTWTEKGVEFLDQTRLPLEETYVLATTYQEVADVITTMVVRGAPAIGVSAAMGVALG 61
Query: 64 IKDKQ-------FPDNE------------------------------------------- 73
+K P+ E
Sbjct: 62 VKQSPATTVADLTPEFEQICRVLAATRPTAVNLFWAIARMREVYQKLSAKPGISIPEIRE 121
Query: 74 -LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
LI M E+DI+ + +G+NGA+ L PR VLTHCN G+LAT YGTALGV
Sbjct: 122 ILIAEANKMYEEDIASCREMGKNGAELL----PRSG--GVLTHCNAGALATCGYGTALGV 175
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
IR+ A + + Y E +L AR TA +
Sbjct: 176 IRAAVEAGAEIQV-------------YADETRPFLQGARLTAWEL 207
>gi|384418821|ref|YP_005628181.1| IDI2 protein [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461734|gb|AEQ96013.1| IDI2 protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 354
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAGADWRAVIAREAQAIA---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V + + +AI S+ VRGAPAI I G+ +
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALA 74
Query: 64 IKDKQFPD-NELIQLIESMLEK------------------------DISDNKAIGRNGAQ 98
+D D N +Q +E L + +D +A+ AQ
Sbjct: 75 ARDIAADDGNAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWRAVIAREAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 135 AIADEDLAANRHMGALGAALIAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +K+ L+
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKSGLV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|358065897|ref|ZP_09152431.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium hathewayi
WAL-18680]
gi|356695760|gb|EHI57385.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium hathewayi
WAL-18680]
Length = 363
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D ++ E ++YL S+RPTAVN+ A + ++ L K + +K L Q ++
Sbjct: 76 DYDEFKQAFTEVMEYLASSRPTAVNLFWALNRMERKLDS-VKGLGIAEIKNCLRQEAWAI 134
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E+D + KAIG G L L PG + +LTHCN G++ATA+YGTAL H +
Sbjct: 135 REEDANVCKAIGEYG---LSLLKPG---MGLLTHCNAGTIATAQYGTALA---PFHLGQE 185
Query: 272 IG---AAYCTETRPYNQGAR 288
G AY ETRP QGAR
Sbjct: 186 RGYQFKAYVDETRPLLQGAR 205
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 55/213 (25%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
+K +L ILDQ LLP+ K +++ + E ++AIK ++VRGAPAI I G+ + K +
Sbjct: 15 DKDALVILDQTLLPNEVKYLELKSKEAIFEAIKKLRVRGAPAIGIAAAFGVYLCTKHVET 74
Query: 70 PD--------NELIQLIES-------------MLEKDISDNKAIG--------RNGAQAL 100
D E+++ + S +E+ + K +G R A A+
Sbjct: 75 DDYDEFKQAFTEVMEYLASSRPTAVNLFWALNRMERKLDSVKGLGIAEIKNCLRQEAWAI 134
Query: 101 IDLNPRVSK-------------LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKD 147
+ + V K + +LTHCN G++ATA+YGTAL H + +
Sbjct: 135 REEDANVCKAIGEYGLSLLKPGMGLLTHCNAGTIATAQYGTALA---PFHLGQE----RG 187
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
QF + YV E L AR TA +K +
Sbjct: 188 YQF------KAYVDETRPLLQGARLTAWELKES 214
>gi|167630245|ref|YP_001680744.1| translation initiation factor, aif-2bi family [Heliobacterium
modesticaldum Ice1]
gi|218526621|sp|B0TH58.1|MTNA_HELMI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|167592985|gb|ABZ84733.1| putative translation initiation factor, aif-2bi family
[Heliobacterium modesticaldum Ice1]
Length = 345
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D E V + + L RPTAVN+ A +++ L + + V + RLI +++
Sbjct: 68 DRAEFEADVKKAIADLGKTRPTAVNLFWALRRMEAVLED-IRTYSVKEQQERLIAEAKAV 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D + N+ +G+ G ++L P +LTHCN G+LATA +GTALGVIR+ H A K
Sbjct: 127 FDEDRAMNEQMGQYG----LELIP--ESAGILTHCNAGALATAGFGTALGVIRAAHRAGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
+ + ETRP QGAR
Sbjct: 181 EISVFADETRPLLQGAR 197
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 9/82 (10%)
Query: 64 IKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLAT 123
+K++Q LI +++ ++D + N+ +G+ G ++L P + +LTHCN G+LAT
Sbjct: 112 VKEQQ---ERLIAEAKAVFDEDRAMNEQMGQYG----LELIPESA--GILTHCNAGALAT 162
Query: 124 AEYGTALGVIRSLHGANKIVDI 145
A +GTALGVIR+ H A K + +
Sbjct: 163 AGFGTALGVIRAAHRAGKEISV 184
>gi|381171380|ref|ZP_09880526.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380688150|emb|CCG37013.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 354
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ +I + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAHQRIAKVFAGETRPWLQGAR 207
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAH 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|325915463|ref|ZP_08177777.1| methylthioribose-1-phosphate isomerase [Xanthomonas vesicatoria
ATCC 35937]
gi|325538345|gb|EGD10027.1| methylthioribose-1-phosphate isomerase [Xanthomonas vesicatoria
ATCC 35937]
Length = 354
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A A+ V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAAADWREVIAREAQAIS---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L+ GV LTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-GLVAAGSGV-----LTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V + + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCESSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL----------------IESMLEKDISDNKAIGRNGAQ 98
++ D L++L + +L +D + + AQ
Sbjct: 75 AREIDADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAAADWREVIAREAQ 134
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 135 AISDEDLAANRHMGALGAGLVAAGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKV 194
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +K+ L+
Sbjct: 195 -------------FAGETRPWLQGARLTVWELQQ--DGINATLI--ADSAAAHLMKSGLV 237
Query: 206 QLI 208
Q +
Sbjct: 238 QWV 240
>gi|289578625|ref|YP_003477252.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
italicus Ab9]
gi|289528338|gb|ADD02690.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
italicus Ab9]
Length = 346
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+F D + K + E L+ L+++RPTAVN+ A +K + + + ++ + L
Sbjct: 65 KEFLKEDREIFFKKMEEALEVLINSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQA-LK 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVI 263
+ +S+ +DI NK I + G + + K N +LTHCNTG+LAT YGTALGVI
Sbjct: 124 KEADSIYLEDIEINKKIAKFGNEVI--------KENAVILTHCNTGALATVGYGTALGVI 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R H + K Y ETRP QG++
Sbjct: 176 REAHYSGKNIFVYADETRPRLQGSK 200
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 42/183 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK ++SI ++ L ++DQ LP++ ++ + D AIK M VRGAPAI G+
Sbjct: 1 MKEIKSIEFKNEVLYLIDQRKLPNSYEIFECKTYRDVNFAIKEMVVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNEL-IQLIESMLEKDISD--------------NKAIGRNGAQALID--- 102
V+ K+ D E+ + +E LE I+ K I +N LID
Sbjct: 61 VLAAKEFLKEDREIFFKKMEEALEVLINSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQ 120
Query: 103 ---------------LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHG 138
+N +++K +LTHCNTG+LAT YGTALGVIR H
Sbjct: 121 ALKKEADSIYLEDIEINKKIAKFGNEVIKENAVILTHCNTGALATVGYGTALGVIREAHY 180
Query: 139 ANK 141
+ K
Sbjct: 181 SGK 183
>gi|294626373|ref|ZP_06704975.1| IDI2 protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292599374|gb|EFF43509.1| IDI2 protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 354
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAGADWREVIAREAQAIA---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDK---------QFPDNELIQL-----------------------------------IE 79
+D Q + L++L +
Sbjct: 75 ARDIAADDGAAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|119510233|ref|ZP_01629370.1| translation initiation factor IF-2B subunit alpha [Nodularia
spumigena CCY9414]
gi|119465082|gb|EAW45982.1| translation initiation factor IF-2B subunit alpha [Nodularia
spumigena CCY9414]
Length = 347
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L S RPTAVN+ A + + E V +K L+Q + + +D+ +AIG
Sbjct: 82 ELLRSTRPTAVNLFWAISRMMKTAYE--SLGTVAEIKEHLLQTAQGINAEDLQTCQAIGD 139
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+G AL KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP
Sbjct: 140 HGLTALPSTP---EKLRILTHCNAGALATAGYGTALGVVRSAWREGRLERVFADETRPRL 196
Query: 285 QGAR 288
QGA+
Sbjct: 197 QGAK 200
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 81/179 (45%), Gaps = 50/179 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I++ S+ ++DQ LP +V I+ ED +AIK+M VRGAPAI + G+ +
Sbjct: 2 LYPVIWQNDSVSLIDQTRLPGEYTVVQIHRSEDMARAIKTMIVRGAPAIGVAAAYGMYLG 61
Query: 64 IKD------KQF---------------PD--------------------------NELIQ 76
++ +F P L+Q
Sbjct: 62 AREITAENHHEFLSGLERVAELLRSTRPTAVNLFWAISRMMKTAYESLGTVAEIKEHLLQ 121
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ + +D+ +AIG +G AL KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 122 TAQGINAEDLQTCQAIGDHGLTALPSTP---EKLRILTHCNAGALATAGYGTALGVVRS 177
>gi|32476342|ref|NP_869336.1| translation initiation factor eIF-2B [Rhodopirellula baltica SH 1]
gi|81657884|sp|Q7UF90.1|MTNA_RHOBA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|32446887|emb|CAD78793.1| putative translation initiation factor eIF-2B [Rhodopirellula
baltica SH 1]
Length = 356
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 8/127 (6%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ +DYL ++RPTAVN+ A D +++ + +++ PV ++ RL+ + + D ++
Sbjct: 88 QTIDYLATSRPTAVNLFWALDRMRAIVDDFS--GPVAELRERLVTEAIRIHDDDRQMCRS 145
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IG +GA L D +V+THCN GSLAT+ +GTAL + LH + + ETR
Sbjct: 146 IGCHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGHSLEVFADETR 199
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 200 PLLQGAR 206
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IG +GA L D +V+THCN GSLAT+ +GTAL + LH +
Sbjct: 144 RSIGCHGATLLADCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGH-------- 189
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-------DSVKSSL 188
SLE + E L AR TA + +A DS+ SL
Sbjct: 190 -----SLEVFADETRPLLQGARLTAWELHQAGIPVTVCTDSMSGSL 230
>gi|294665965|ref|ZP_06731229.1| IDI2 protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292604268|gb|EFF47655.1| IDI2 protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 354
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVLG--AAGADWREVIAREAQAIA---DEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 A-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDK---------QFPDNELIQL-----------------------------------IE 79
+D Q + L++L +
Sbjct: 75 ARDIAADDGAAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|340344037|ref|ZP_08667169.1| Putative translation initiation factor, aIF-2BI family [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519178|gb|EGP92901.1| Putative translation initiation factor, aIF-2BI family [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 351
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+K D + + V +K +I + M ++DI NK +G+ G
Sbjct: 92 LYETRPTAVNLKWGLDKIMQVANS---GDAVEQIKQSIINEAKKMADEDIQINKTMGKYG 148
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D N ++THCN G+LAT YGTALGVIR+ + K TETRP QG
Sbjct: 149 S-VLFDNND-----TIMTHCNAGALATVAYGTALGVIRATRESGKNIKVIATETRPIQQG 202
Query: 287 AR 288
+R
Sbjct: 203 SR 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 52/185 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+++ ++ + + ++DQ LP+ V ++ AI+++ VRGAPAI + G GL +
Sbjct: 9 SLRTVEWKDNKVVMIDQTKLPNQLIFVTYDDYNQVADAIRTLVVRGAPAIGVSGAFGLAL 68
Query: 63 -DIKDKQFPDNELIQLIES----------------------------------------- 80
++ K +LI +E
Sbjct: 69 ASLQSKATTKEQLISDLEKARKILYETRPTAVNLKWGLDKIMQVANSGDAVEQIKQSIIN 128
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
M ++DI NK +G+ G+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 129 EAKKMADEDIQINKTMGKYGS-VLFDNND-----TIMTHCNAGALATVAYGTALGVIRAT 182
Query: 137 HGANK 141
+ K
Sbjct: 183 RESGK 187
>gi|16082220|ref|NP_394668.1| translation initiation factor IF-2B subunit alpha [Thermoplasma
acidophilum DSM 1728]
gi|10640523|emb|CAC12337.1| translation initiation factor aIF-2B, alpha chain related protein
[Thermoplasma acidophilum]
Length = 340
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+++L+++ YE +K++DQ LP ++ + N +D AIK+M VRGAPAI + GL
Sbjct: 9 VRTLKAVWYEDDEVKLIDQRKLPEKIEIFEAKNSDDIAYAIKNMVVRGAPAIGVTAAYGL 68
Query: 61 VVDIKDKQFPDN-------------ELIQLIESMLEKDISDNKA-------------IGR 94
+ K + D +L + I M D N A IG
Sbjct: 69 AMAKKKGENMDEAVRKIGSTRPTAYDLFKAIRYMQINDFDMNSARRYAMEISGRSRKIGE 128
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
G Q LI N R +LTHCN G+LA ++GTAL IR HG K
Sbjct: 129 IGNQ-LIGQNAR-----ILTHCNAGALAVVDWGTALAPIRMAHGDGK 169
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCN G+LA ++GTAL IR HG K + ETRP QGA+
Sbjct: 140 ILTHCNAGALAVVDWGTALAPIRMAHGDGKNIFVFVDETRPRLQGAK 186
>gi|85860807|ref|YP_463009.1| methylthioribose salvage protein [Syntrophus aciditrophicus SB]
gi|123517736|sp|Q2LXN1.1|MTNA_SYNAS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|85723898|gb|ABC78841.1| methylthioribose salvage protein [Syntrophus aciditrophicus SB]
Length = 367
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 78/158 (49%), Gaps = 26/158 (16%)
Query: 150 FPDNDSLEKYVG--EKL-DYLVSARPTAVNMKRAADSVKSSL---------SEWAKASP- 196
PD DS E + E L D ARPTA N+ A + +K SE + A+P
Sbjct: 68 LPD-DSPEAFCNGFEALCDRFAQARPTARNLFWAVERMKRCFGEHFHPDTSSECSSAAPG 126
Query: 197 ------VNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGS 250
+ V+ L+ M E+D++ N+ IG G Q LI +LTHCN G+
Sbjct: 127 KEIARTLAAVRKALVAEARRMAEEDVAINRRIGHYG-QVLIR-----DGYRILTHCNAGA 180
Query: 251 LATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LATA YGTALGVIR+ A K + ETRP QGAR
Sbjct: 181 LATAGYGTALGVIRAAREAGKQVQVFADETRPVLQGAR 218
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 63/204 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S +I + ++ +LDQ LP + + E+ AI+ + VRGAPAI + +G+
Sbjct: 4 SFTTIAWRNDAVLLLDQQALPGEERYLTCTRFEEVLTAIRDLTVRGAPAIGVASAMGIA- 62
Query: 63 DIKDKQFPDNE------------------------LIQLIESM-------LEKDIS---D 88
+ PD+ L +E M D S
Sbjct: 63 -LGALSLPDDSPEAFCNGFEALCDRFAQARPTARNLFWAVERMKRCFGEHFHPDTSSECS 121
Query: 89 NKAIGRNGAQAL------------------IDLNPRVSKLN---------VLTHCNTGSL 121
+ A G+ A+ L + +N R+ +LTHCN G+L
Sbjct: 122 SAAPGKEIARTLAAVRKALVAEARRMAEEDVAINRRIGHYGQVLIRDGYRILTHCNAGAL 181
Query: 122 ATAEYGTALGVIRSLHGANKIVDI 145
ATA YGTALGVIR+ A K V +
Sbjct: 182 ATAGYGTALGVIRAAREAGKQVQV 205
>gi|336176537|ref|YP_004581912.1| translation initiation factor, aIF-2BI family [Frankia symbiont of
Datisca glomerata]
gi|334857517|gb|AEH07991.1| translation initiation factor, aIF-2BI family [Frankia symbiont of
Datisca glomerata]
Length = 369
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 37/166 (22%)
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQ 206
+++ D +L + +G D ARPTA+ + D+ + L+ A ++
Sbjct: 69 ERENWDAATLTRAIGAIRD----ARPTALALALGVDAARQRLAHGISA---------VLA 115
Query: 207 LIESMLEKDISDNKAIGRNGAQALI----------------------DLNPGVSK--LNV 242
+ +LE+D N+AIG +GA L+ D + G+ + L +
Sbjct: 116 YADDLLEQDERTNRAIGAHGADWLLRGAARPTGTTHSTHSTHSTHSGDTDSGIGRRPLRI 175
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LATA +GTALG+IR LH + Y ETRP QG+R
Sbjct: 176 LTHCNTGALATAGWGTALGIIRELHARGALEIVYVDETRPLLQGSR 221
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 26/97 (26%)
Query: 79 ESMLEKDISDNKAIGRNGAQALI----------------------DLNPRVSK--LNVLT 114
+ +LE+D N+AIG +GA L+ D + + + L +LT
Sbjct: 118 DDLLEQDERTNRAIGAHGADWLLRGAARPTGTTHSTHSTHSTHSGDTDSGIGRRPLRILT 177
Query: 115 HCNTGSLATAEYGTALGVIRSLH--GANKIVDIKDKQ 149
HCNTG+LATA +GTALG+IR LH GA +IV + + +
Sbjct: 178 HCNTGALATAGWGTALGIIRELHARGALEIVYVDETR 214
>gi|114566317|ref|YP_753471.1| S-methyl-5-thioribose-1-phosphate isomerase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318601|sp|Q0AYV4.1|MTNA_SYNWW RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|114337252|gb|ABI68100.1| translation initiation factor 2B subunit I family (IF-2BI)
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 346
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
Y + + RPTAVN+ A + ++ E SP + RL Q +++ ++DI
Sbjct: 75 YFSRMKELFAATRPTAVNLFWALERMERVYRENHHLSPEELAR-RLCQEAQNLYKEDIRV 133
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
N+AIG G + L + + V+T CN G+LAT YGTALGVIRS NKI +
Sbjct: 134 NEAIGEQGQELLGEGS------RVMTICNAGALATCGYGTALGVIRSAARRNKIEMVWAC 187
Query: 279 ETRPYNQGAR 288
ETRP QG+R
Sbjct: 188 ETRPVLQGSR 197
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 80/186 (43%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ YE+ +L IL+Q LP E+ AIK ++VRGAP I + GL +
Sbjct: 2 IRNLYYEEQALMILNQNCLPEELVYERCERPEEVVAAIKGLKVRGAPLIGVTAAFGLAMA 61
Query: 63 --------DIKDKQF-----------------------------------PDN---ELIQ 76
+ +D F P+ L Q
Sbjct: 62 FSGYSGTGEARDVYFSRMKELFAATRPTAVNLFWALERMERVYRENHHLSPEELARRLCQ 121
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+++ ++DI N+AIG G Q L+ RV +T CN G+LAT YGTALGVIRS
Sbjct: 122 EAQNLYKEDIRVNEAIGEQG-QELLGEGSRV-----MTICNAGALATCGYGTALGVIRSA 175
Query: 137 HGANKI 142
NKI
Sbjct: 176 ARRNKI 181
>gi|302342283|ref|YP_003806812.1| translation initiation factor, aIF-2BI family [Desulfarculus
baarsii DSM 2075]
gi|301638896|gb|ADK84218.1| translation initiation factor, aIF-2BI family [Desulfarculus
baarsii DSM 2075]
Length = 353
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP--VNTVKTRLIQLIE 209
D + + + ARPTAVN+ A + E A+A+ V+ + L +
Sbjct: 70 DPAKFRAALARRAQVMAQARPTAVNLAWAC----GQMLETARAAEGEVSAIVEALYHKSQ 125
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
MLE DI+ N+A+GR+GA AL+ +LTHCN G+LAT YGTALGV R+ A
Sbjct: 126 RMLEDDIAINQAMGRHGA-ALVP-----HGATILTHCNAGALATGGYGTALGVARAAAEA 179
Query: 270 NKIGAAYCTETRPYNQGAR 288
K + ETRP QGAR
Sbjct: 180 GKNPSVIADETRPLLQGAR 198
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 53/186 (28%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+++ I ++ ++ ILDQ LLP + ++ IK++ VRGAPAI + +GLV+
Sbjct: 2 TIRPIYWQDEAVMILDQRLLPGKLVYLPCRDMRRVIHCIKTLAVRGAPAIGVAAAMGLVL 61
Query: 63 D----------------------------------------IKDKQFPDNELIQLIES-- 80
++ + + E+ ++E+
Sbjct: 62 AARAIKADDPAKFRAALARRAQVMAQARPTAVNLAWACGQMLETARAAEGEVSAIVEALY 121
Query: 81 -----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
MLE DI+ N+A+GR+GA AL+ +LTHCN G+LAT YGTALGV R+
Sbjct: 122 HKSQRMLEDDIAINQAMGRHGA-ALVP-----HGATILTHCNAGALATGGYGTALGVARA 175
Query: 136 LHGANK 141
A K
Sbjct: 176 AAEAGK 181
>gi|238019280|ref|ZP_04599706.1| hypothetical protein VEIDISOL_01144 [Veillonella dispar ATCC 17748]
gi|237863979|gb|EEP65269.1| hypothetical protein VEIDISOL_01144 [Veillonella dispar ATCC 17748]
Length = 354
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 72/126 (57%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI--ESML--EKDISDNKAI 222
L RPTA+N+ A D V S + E ++ + + +++LI E+++ E+D+S N+ +
Sbjct: 85 LKETRPTAINLAWAVDRVISLVKEHVESM---SSMSEVVELIRKEAIIIHEEDVSLNRRM 141
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GA L G + +LTHCN G+LAT GTALGV+R LH ++ Y ETRP
Sbjct: 142 AEAGAT----LFEGQKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADETRP 197
Query: 283 YNQGAR 288
QGAR
Sbjct: 198 LLQGAR 203
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 93/225 (41%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 66 DK---------------QFPD---------------------------------NELIQL 77
+ +F + +E+++L
Sbjct: 63 EAGRLEVPFSEQLTSLYEFSETLKETRPTAINLAWAVDRVISLVKEHVESMSSMSEVVEL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N+ + GA L + +LTHCN G+LAT GTALGV+
Sbjct: 123 IRKEAIIIHEEDVSLNRRMAEAGAT----LFEGQKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|424868685|ref|ZP_18292422.1| Translation initiation factor, aIF-2BI/5-methylthioribose-1-
phosphate isomerase [Leptospirillum sp. Group II 'C75']
gi|124514754|gb|EAY56266.1| translation initiation factor, aIF-2BI/5-methylthioribose-1-
phosphate isomerase [Leptospirillum rubarum]
gi|387221140|gb|EIJ75732.1| Translation initiation factor, aIF-2BI/5-methylthioribose-1-
phosphate isomerase [Leptospirillum sp. Group II 'C75']
Length = 350
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
S ++++ E L + RPTAVN+ A + +++ + P + ++ +S+ ++
Sbjct: 77 SYQQHMEETTRVLGATRPTAVNLFWALERMRALWATPVIGDPSGLTGSLFLEA-QSIKDE 135
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+ A K
Sbjct: 136 DIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVSAGKTIR 189
Query: 275 AYCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 190 VFADETRPYLQGAR 203
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+S+ ++DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+
Sbjct: 130 QSIKDEDIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVS 183
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A K + + + E YL AR TA + D + ++L
Sbjct: 184 AGKTIRV-------------FADETRPYLQGARLTAYEL--VEDGIPTTL 218
>gi|206602451|gb|EDZ38932.1| Translation initiation factor, aIF-2BI/5- methylthioribose-1-
phosphate isomerase [Leptospirillum sp. Group II '5-way
CG']
Length = 350
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
S ++++ E L + RPTAVN+ A + +++ + P + ++ +S+ ++
Sbjct: 77 SYQQHMEETTRLLGATRPTAVNLFWALERMRALWATPVIGDPSGLTGSLFLE-AQSIKDE 135
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+ A K
Sbjct: 136 DIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVSAGKTIR 189
Query: 275 AYCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 190 VFADETRPYLQGAR 203
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+S+ ++DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+
Sbjct: 130 QSIKDEDIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVS 183
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A K + + + E YL AR TA + D + ++L
Sbjct: 184 AGKTIRV-------------FADETRPYLQGARLTAYEL--VEDGIPTTL 218
>gi|20093773|ref|NP_613620.1| translation initiation factor eIF-2B alpha subunit [Methanopyrus
kandleri AV19]
gi|19886683|gb|AAM01550.1| Translation initiation factor eIF-2B alpha subunit [Methanopyrus
kandleri AV19]
Length = 328
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 32/155 (20%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-K 65
+ +++ ++LDQ LP + + EDA +AI++M+VRGAP I V LG V +
Sbjct: 14 VYWDEARFEVLDQTELPDREVWRECTSYEDAAEAIENMRVRGAPLIGAVAALGAWVAYER 73
Query: 66 DKQFPD------------NELIQLIESM-------------LEKDISDNKAIGRNGAQAL 100
D+ + + L +E M L +D+ N+ +G +GA+ L
Sbjct: 74 DEDYGEAIERLRNTRPTARNLFWALERMEEAKNPRKEAERILREDVEVNRELGDHGAELL 133
Query: 101 IDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
D + VLTHCN G+LA ++GTALGV+RS
Sbjct: 134 PD------ECTVLTHCNAGALACVDWGTALGVVRS 162
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 22/133 (16%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
E Y GE ++ L + RPTA N+ A + ++ + + +A E +L +D+
Sbjct: 75 EDY-GEAIERLRNTRPTARNLFWALERMEEAKNPRKEA--------------ERILREDV 119
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANKIGAA 275
N+ +G +GA+ L D + VLTHCN G+LA ++GTALGV+RS + +K
Sbjct: 120 EVNRELGDHGAELLPD------ECTVLTHCNAGALACVDWGTALGVVRSAVFNMSKEVEV 173
Query: 276 YCTETRPYNQGAR 288
TETRP QGAR
Sbjct: 174 IATETRPVQQGAR 186
>gi|397779917|ref|YP_006544390.1| methylthioribose-1-phosphate isomerase [Methanoculleus bourgensis
MS2]
gi|396938419|emb|CCJ35674.1| methylthioribose-1-phosphate isomerase [Methanoculleus bourgensis
MS2]
Length = 350
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 127 GTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKS 186
G AL +RS PD D + VG+ D L RPTAVN+ D V
Sbjct: 63 GVALAAVRSAE-------------PDLDRFREGVGQAADLLRGTRPTAVNLAWGIDRVVR 109
Query: 187 SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHC 246
+ A A+ V K I ++ E+D + +G G + L P ++ VLTHC
Sbjct: 110 KV---AMAASVAEAKALAIAEANAVAEEDELTCRRLGTFGEE----LFP--ARCTVLTHC 160
Query: 247 NTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
N G+LA +GTALGVIRS A K ETRP NQG+R
Sbjct: 161 NAGALACRCWGTALGVIRSAVAAGKDVRVIACETRPLNQGSR 202
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 81/178 (45%), Gaps = 44/178 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
E S+ +DQ LLP ++V VED +AI+ ++VRGAPA+ I G +G+ +
Sbjct: 14 ETGSIVYIDQTLLPGQYRVVRCTTVEDLARAIRRLEVRGAPALGIAGAMGVALAAVRSAE 73
Query: 70 PDNE----------------------LIQLIESMLEK-----DISDNKAIGRNGAQALI- 101
PD + L I+ ++ K +++ KA+ A A+
Sbjct: 74 PDLDRFREGVGQAADLLRGTRPTAVNLAWGIDRVVRKVAMAASVAEAKALAIAEANAVAE 133
Query: 102 --------------DLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+L P ++ VLTHCN G+LA +GTALGVIRS A K V +
Sbjct: 134 EDELTCRRLGTFGEELFP--ARCTVLTHCNAGALACRCWGTALGVIRSAVAAGKDVRV 189
>gi|297172455|gb|ADI23428.1| predicted translation initiation factor 2B subunit, eIF-2B
alpha/beta/delta family [uncultured gamma
proteobacterium HF0770_33G18]
Length = 369
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
DS ++++ + L+SARPTA+N++ A + + L +P + + IQ ++ + E
Sbjct: 73 DSSDEHLLSAAEVLISARPTAINLRWAVEKI---LPRILAVAPSDRFELAQIQ-VDKLCE 128
Query: 214 KDISDNKAIGRNGAQALIDLNPGVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+DI+ N IG +G + L +L S LN+LTHCN G LAT ++GTAL I + A
Sbjct: 129 EDIAANSRIGNHGFRLLQELYLQKSTEQPLNILTHCNAGWLATVDWGTALAPIFKAYDAG 188
Query: 271 KIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 189 LQVHVWVDETRPRNQGA 205
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 45/197 (22%)
Query: 2 KSLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
+ +SI E+ S + ++DQ LP ++ + V+DA AI +M VRGAP I G
Sbjct: 6 QHFRSIWLEQESQVVMVIDQQQLPFHFEIKQLTTVDDAAAAIANMVVRGAPLIGATAACG 65
Query: 60 LVV----DIKDKQF--------------------------------PDN--ELIQL-IES 80
L++ D D+ P + EL Q+ ++
Sbjct: 66 LLLATAKDSSDEHLLSAAEVLISARPTAINLRWAVEKILPRILAVAPSDRFELAQIQVDK 125
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ E+DI+ N IG +G + L +L + S LN+LTHCN G LAT ++GTAL I +
Sbjct: 126 LCEEDIAANSRIGNHGFRLLQELYLQKSTEQPLNILTHCNAGWLATVDWGTALAPIFKAY 185
Query: 138 GANKIVDIK-DKQFPDN 153
A V + D+ P N
Sbjct: 186 DAGLQVHVWVDETRPRN 202
>gi|17231058|ref|NP_487606.1| methylthioribose-1-phosphate isomerase [Nostoc sp. PCC 7120]
gi|81770660|sp|Q8YR82.1|MTNA_ANASP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|17132699|dbj|BAB75265.1| translation initiation factor IF-2B alpha subunit [Nostoc sp. PCC
7120]
Length = 347
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 162 EKLDYLVSA-RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
EK+ L+ A RPTAVN+ A ++ + + V +K L+Q +++ +D+ +
Sbjct: 78 EKVAQLLRATRPTAVNLFWAISRMQKT--AYKTLGTVAQIKENLLQTAQAINAEDLQTCQ 135
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
AIG NG A++ P KL +LTHCN G+LATA YGTALGV+RS ++ + ET
Sbjct: 136 AIGDNGL-AILPKTP--EKLTLLTHCNAGALATAGYGTALGVVRSAWREGRLERLFADET 192
Query: 281 RPYNQGAR 288
RP QGA+
Sbjct: 193 RPRLQGAK 200
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 52/177 (29%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I++ + + ++DQ LP+ +V+I+ ED +AI++M VRGAPAI + G+ + ++
Sbjct: 5 VIWQNNCVLLIDQTRLPNEYAVVEIHRSEDMARAIQTMIVRGAPAIGVAAAYGMYLGARE 64
Query: 67 ------------------------------------------------KQFPDNELIQLI 78
Q +N L+Q
Sbjct: 65 IETGERQEFLQELEKVAQLLRATRPTAVNLFWAISRMQKTAYKTLGTVAQIKEN-LLQTA 123
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+++ +D+ +AIG NG A++ P KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 124 QAINAEDLQTCQAIGDNGL-AILPKTPE--KLTLLTHCNAGALATAGYGTALGVVRS 177
>gi|410478822|ref|YP_006766459.1| translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Leptospirillum ferriphilum ML-04]
gi|406774074|gb|AFS53499.1| translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Leptospirillum ferriphilum ML-04]
Length = 350
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
S ++++ E L + RPTAVN+ A + +++ + P + ++ +S+ ++
Sbjct: 77 SYQQHMEETTRLLGATRPTAVNLFWALERMRALWATPVIGDPSGLTGSLFLE-AQSIKDE 135
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+ A K
Sbjct: 136 DIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVSAGKTIR 189
Query: 275 AYCTETRPYNQGAR 288
+ ETRPY QGAR
Sbjct: 190 VFADETRPYLQGAR 203
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 21/110 (19%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+S+ ++DI N+ +G +G L D VLTHCN G+LAT +GTALGVIR+
Sbjct: 130 QSIKDEDIRMNRKMGDHGQALLPD------SATVLTHCNAGALATGGFGTALGVIRAAVS 183
Query: 139 ANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A K + + + E YL AR TA + D + ++L
Sbjct: 184 AGKTIRV-------------FADETRPYLQGARLTAYEL--VEDGIPTTL 218
>gi|297544848|ref|YP_003677150.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296842623|gb|ADH61139.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 346
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+F D + K + E L+ L+++RPTAVN+ A +K + + + ++ + L
Sbjct: 65 KEFLKEDREIFFKKMEEALEVLINSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQA-LK 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVI 263
+ +S+ +DI NK + + G + + K N +LTHCNTG+LAT YGTALGVI
Sbjct: 124 KEADSIYLEDIETNKKMAKFGNEVI--------KENAVILTHCNTGALATVGYGTALGVI 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R H + K Y ETRP QG++
Sbjct: 176 REAHYSGKNIFVYVDETRPRLQGSK 200
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 85/183 (46%), Gaps = 42/183 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK ++SI ++ L ++DQ LP++ ++ + D +IK M VRGAPAI G+
Sbjct: 1 MKDIKSIEFKDEILYLIDQRKLPNSYEIFECKTYSDVNFSIKEMIVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNEL-IQLIESMLEKDISDN--------------KAIGRNGAQALIDL-- 103
V+ K+ D E+ + +E LE I+ K I +N LID+
Sbjct: 61 VLAAKEFLKEDREIFFKKMEEALEVLINSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQ 120
Query: 104 ----------------NPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHG 138
N +++K +LTHCNTG+LAT YGTALGVIR H
Sbjct: 121 ALKKEADSIYLEDIETNKKMAKFGNEVIKENAVILTHCNTGALATVGYGTALGVIREAHY 180
Query: 139 ANK 141
+ K
Sbjct: 181 SGK 183
>gi|346724512|ref|YP_004851181.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346649259|gb|AEO41883.1| methylthioribose-1-phosphate isomerase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 354
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
G ++ +D D + + + L L +ARPTAVN+ A ++ L A +
Sbjct: 68 GWGVVLAARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLG--AAGADW 125
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
V R Q I ++D++ N+ +G GA ALI PG VLTHCNTGSLATA +G
Sbjct: 126 REVIAREAQAIA---DEDLAANRHMGALGA-ALI--APGS---GVLTHCNTGSLATAGFG 176
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ ++ + ETRP+ QGAR
Sbjct: 177 TALGVIRAGMAQQRVAKVFAGETRPWLQGAR 207
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDNE---------LIQL-----------------------------------IE 79
+D D L++L +
Sbjct: 75 ARDIAADDGSAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++ + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRVAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|433675899|ref|ZP_20508078.1| methylthioribose-1-phosphate isomerase [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818983|emb|CCP38325.1| methylthioribose-1-phosphate isomerase [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 354
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A ++++L A+ + + + +++ E+D++ N+ +G
Sbjct: 94 LQRLNAARPTAVNLAWALMRMRNTL-----AAAGADWREAIARQAQAIAEEDLAANRHMG 148
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+
Sbjct: 149 ALGA-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQGRIAKVFAGETRPW 202
Query: 284 NQGAR 288
QGAR
Sbjct: 203 LQGAR 207
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + + + + AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGEALELLDQRKLPFVVEHLQCTDSDQVADAIHTLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESML---------------------------------------- 82
+ Q D + + +E L
Sbjct: 75 ARAVQADDGAQALARLEPALQRLNAARPTAVNLAWALMRMRNTLAAAGADWREAIARQAQ 134
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
E+D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 GRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAAAHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|408405139|ref|YP_006863122.1| translation initiation factor, aIF-2BI family [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365735|gb|AFU59465.1| translation initiation factor, aIF-2BI family [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 347
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G AL +S K K P+ L + L + RPTAVN+ A +
Sbjct: 59 TAAFGLALAAQQS----------KAKTLPE---LMTDLDTAFKVLRATRPTAVNLFWALE 105
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
V + KA + K + M ++DI+ N+ +G NGA+ D + V
Sbjct: 106 RV---MGRAKKAKTLQEAKKAVFDEALKMSDEDINANRQMGANGAKLFRDGD------IV 156
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCN GSLAT YGTALGVIR+ + K + TETRP QG+R
Sbjct: 157 LTHCNAGSLATVAYGTALGVIRAARESGKRLSVIATETRPVMQGSR 202
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 52/184 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
L ++ +E +S+ ++DQ LP+ V + + +AIK + VRGAPAI + GL +
Sbjct: 8 LLTVAWENNSVVLIDQTKLPNKLVYVKCKDYREVAEAIKKLVVRGAPAIGVTAAFGLALA 67
Query: 63 --DIKDKQFPD-------------------NELIQLIE---------------------- 79
K K P+ L +E
Sbjct: 68 AQQSKAKTLPELMTDLDTAFKVLRATRPTAVNLFWALERVMGRAKKAKTLQEAKKAVFDE 127
Query: 80 --SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
M ++DI+ N+ +G NGA+ D + VLTHCN GSLAT YGTALGVIR+
Sbjct: 128 ALKMSDEDINANRQMGANGAKLFRDGD------IVLTHCNAGSLATVAYGTALGVIRAAR 181
Query: 138 GANK 141
+ K
Sbjct: 182 ESGK 185
>gi|160935979|ref|ZP_02083353.1| hypothetical protein CLOBOL_00876 [Clostridium bolteae ATCC
BAA-613]
gi|158441221|gb|EDP18938.1| hypothetical protein CLOBOL_00876 [Clostridium bolteae ATCC
BAA-613]
Length = 366
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ E DYL S+RPTAVN+ A + +++++ K V +K L + + + E
Sbjct: 81 DAFYSRFKELKDYLASSRPTAVNLFWALNRMEAAVIA-NKERGVAAIKELLFEEADRIRE 139
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI ++ IG G L +L ++ +LTHCN G+LATA+YGTA ++ A + G
Sbjct: 140 EDIQISRGIGEIGFGLLKELKKEGKEIGILTHCNAGTLATAKYGTATA---PMYIALEKG 196
Query: 274 AA------YCTETRPYNQGAR 288
A YC ETRP QGAR
Sbjct: 197 WAGTDMHVYCDETRPLLQGAR 217
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
L + + + E+DI ++ IG G L +L ++ +LTHCN G+LATA+YGTA
Sbjct: 130 LFEEADRIREEDIQISRGIGEIGFGLLKELKKEGKEIGILTHCNAGTLATAKYGTA 185
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR 47
++ SL I+DQ LLP T K + +N E+ ++AIK ++VR
Sbjct: 18 DRSSLDIIDQTLLPGTIKRIHLNTKEEIWEAIKKLRVR 55
>gi|156933009|ref|YP_001436925.1| hypothetical protein ESA_00812 [Cronobacter sakazakii ATCC BAA-894]
gi|218526614|sp|A7MKX3.1|MTNA_ENTS8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|156531263|gb|ABU76089.1| hypothetical protein ESA_00812 [Cronobacter sakazakii ATCC BAA-894]
Length = 339
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ L+ L +ARPTAVN+ D +K +L++ + + RL+Q + E+
Sbjct: 75 LGQALEVLRAARPTAVNLMNNLDRMKQALTQPDFVAALGAEALRLVQEDRELCER----- 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I R G++ + PG S+L LTHCNTG LATA GTALGVI H A K+ + E
Sbjct: 130 --IARAGSELV---KPG-SRL--LTHCNTGGLATAGVGTALGVIARAHEAGKVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 42/182 (23%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG-- 56
M++LQ S+ + L ILDQ LP + +N E I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVVDNKLWILDQQALPQQKNWLPADNTEALVGHIHALRVRGAPLIGLSASL 60
Query: 57 -------------CLGLVVDIKDKQFPD-----NELIQLIESMLEKDISDNKAIGRNGAQ 98
LG +++ P N L ++ +++ + D + GA+
Sbjct: 61 LLALLAEHGMTRDALGQALEVLRAARPTAVNLMNNLDRMKQALTQPDF-----VAALGAE 115
Query: 99 ALI------DLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
AL +L R+++ +LTHCNTG LATA GTALGVI H A K+
Sbjct: 116 ALRLVQEDRELCERIARAGSELVKPGSRLLTHCNTGGLATAGVGTALGVIARAHEAGKVA 175
Query: 144 DI 145
++
Sbjct: 176 NV 177
>gi|312137395|ref|YP_004004732.1| translation initiation factor 2b subunit i family (if-2bi)
[Methanothermus fervidus DSM 2088]
gi|311225114|gb|ADP77970.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanothermus fervidus DSM 2088]
Length = 309
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 32/168 (19%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+++II+E + L +LDQ LP + N +D AIK+M VRGAPAI + G+ +
Sbjct: 1 MKTIIWEDNKLLLLDQRKLPDEVTYFECKNHKDVVYAIKNMVVRGAPAIGVAAAFGVALA 60
Query: 63 ------------DIKDKQFPDNELIQLIESML-------------EKDISDNKAIGRNGA 97
+IK+ + L ++ ++ ++D+ NK IG++G+
Sbjct: 61 QINGEDINKAAKEIKNTRPTAINLFWAVDRVVNSDSPIDEALKIYKEDVETNKKIGKHGS 120
Query: 98 QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+ + D + +LTHCN G+LA +YGTALGVIR+ K +++
Sbjct: 121 KLIEDGDV------ILTHCNAGALACVDYGTALGVIRAAKEEGKNIEV 162
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 20/120 (16%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
+ RPTA+N+ A D V +S SP++ + ++D+ NK IG++G++
Sbjct: 76 NTRPTAINLFWAVDRVVNS------DSPIDEAL--------KIYKEDVETNKKIGKHGSK 121
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ D + +LTHCN G+LA +YGTALGVIR+ K CTETRP QGAR
Sbjct: 122 LIEDGDV------ILTHCNAGALACVDYGTALGVIRAAKEEGKNIEVICTETRPLGQGAR 175
>gi|328955160|ref|YP_004372493.1| methylthioribose-1-phosphate isomerase [Coriobacterium glomerans
PW2]
gi|328455484|gb|AEB06678.1| methylthioribose-1-phosphate isomerase [Coriobacterium glomerans
PW2]
Length = 366
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D DS DYL S+RPTAVN+ A D ++ L K ++ +K L + +
Sbjct: 79 DYDSFSAEFTSIKDYLASSRPTAVNLFWALDRMQRVLVN-KKGETISQIKKALFHEADRI 137
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA-----LGVIRSL 266
+D+ ++ IG G L +L +++ ++THCN G+LATA+YGTA + + +
Sbjct: 138 RAEDVEISRRIGEIGFSILENLKKEGTEIGIMTHCNAGTLATAKYGTATAPMYVALEKGW 197
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
G + YC ETRP QGAR
Sbjct: 198 RGDDM--HVYCDETRPLLQGAR 217
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 48/165 (29%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-----VDIKD- 66
+L I+DQ LLP T K +D+ E+ + AIK ++VRGAPAI + G+ ++ KD
Sbjct: 21 ALDIIDQTLLPTTIKRIDLGTKEEIWDAIKKLRVRGAPAIGVAAAYGIALLASKIEAKDY 80
Query: 67 ----KQFPD------------------------------NELIQLIESML--------EK 84
+F E I I+ L +
Sbjct: 81 DSFSAEFTSIKDYLASSRPTAVNLFWALDRMQRVLVNKKGETISQIKKALFHEADRIRAE 140
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
D+ ++ IG G L +L +++ ++THCN G+LATA+YGTA
Sbjct: 141 DVEISRRIGEIGFSILENLKKEGTEIGIMTHCNAGTLATAKYGTA 185
>gi|313894517|ref|ZP_07828081.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. oral
taxon 158 str. F0412]
gi|313440913|gb|EFR59341.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. oral
taxon 158 str. F0412]
Length = 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
L RPTA+N+ A D V S + + ++ S +N V + + + E+D+S N+ + +
Sbjct: 85 LKETRPTAINLAWAVDRVISLVKDQVESMSSMNDVVDLITKEAIIIHEEDVSLNRRMAES 144
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA L G + +LTHCN G+LAT GTALGV+R LH ++ Y ETRP Q
Sbjct: 145 GAT----LFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADETRPLLQ 200
Query: 286 GAR 288
GAR
Sbjct: 201 GAR 203
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 93/221 (42%), Gaps = 63/221 (28%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV---V 62
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL+ +
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEISYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 63 DIKDKQFPDNE----------------------------LIQLIESMLEKDISDNKAIGR 94
+ ++ P +E +I L++ +E S N +
Sbjct: 63 EAGRQEIPFSEQLTSLYEFSETLKETRPTAINLAWAVDRVISLVKDQVESMSSMNDVVDL 122
Query: 95 NGAQALI------DLNPRVSK-----------LNVLTHCNTGSLATAEYGTALGVIRSLH 137
+A+I LN R+++ + +LTHCN G+LAT GTALGV+R LH
Sbjct: 123 ITKEAIIIHEEDVSLNRRMAESGATLFEGKKNIRILTHCNAGALATGGLGTALGVVRKLH 182
Query: 138 GANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
+N LE+ Y E L AR TA +
Sbjct: 183 --------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|242399432|ref|YP_002994857.1| Translation initiation factor eIF-2B, beta subunit [Thermococcus
sibiricus MM 739]
gi|242265826|gb|ACS90508.1| Translation initiation factor eIF-2B, beta subunit [Thermococcus
sibiricus MM 739]
Length = 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 83/167 (49%), Gaps = 21/167 (12%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG AL +S K+K F D K + L + RPTAVN+ A
Sbjct: 64 ATAAYGLALLAEKS------NAKTKEKFF---DEFYK----AFEILKNTRPTAVNLFWAL 110
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ VK L E K + ++T+K +I+ + ++D+ N +G GA+ L + N
Sbjct: 111 NRVKRLLEE-HKENNLDTIKKLIIEEAHKIADEDVEANLRMGHYGAEIL-------PEGN 162
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN GSLAT GT +R +H K+ + ETRP QGAR
Sbjct: 163 VLTHCNAGSLATVHLGTVGAALRVMHREGKLKLLWVDETRPVLQGAR 209
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 55/186 (29%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-- 62
+S+ + + + ++DQLLLP K++ + VED +AIK++QVRGAPAI GL +
Sbjct: 15 RSVEFREGKVYLIDQLLLPREFKVIALEKVEDVARAIKTLQVRGAPAIGATAAYGLALLA 74
Query: 63 -----DIKDKQFPD----------------------NELIQLIESMLE------------ 83
K+K F + N + +L+E E
Sbjct: 75 EKSNAKTKEKFFDEFYKAFEILKNTRPTAVNLFWALNRVKRLLEEHKENNLDTIKKLIIE 134
Query: 84 -------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+D+ N +G GA+ L + NVLTHCN GSLAT GT +R +
Sbjct: 135 EAHKIADEDVEANLRMGHYGAEIL-------PEGNVLTHCNAGSLATVHLGTVGAALRVM 187
Query: 137 HGANKI 142
H K+
Sbjct: 188 HREGKL 193
>gi|374312278|ref|YP_005058708.1| translation initiation factor, aIF-2BI family [Granulicella
mallensis MP5ACTX8]
gi|358754288|gb|AEU37678.1| translation initiation factor, aIF-2BI family [Granulicella
mallensis MP5ACTX8]
Length = 350
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLE 213
+L + V + L RPTAVN+ V+ +E A K +P+ +K ++ L + + +
Sbjct: 72 ALNEEVAVICETLAKTRPTAVNLFWGIAQVRDLYNELAAKNTPIREIKAAVVALGQRLYD 131
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKI 272
+DI+ K +G +GA L P + VLTHCN G+LAT YG+ALGVIR ++ +KI
Sbjct: 132 EDIAACKRMGAHGAS----LMP--KEGTVLTHCNAGALATCGYGSALGVIRGAIEAGHKI 185
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 186 -HVFADETRPFLQGAR 200
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 82/199 (41%), Gaps = 57/199 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++ + + LDQ LP V + + I+ M VRGAPAI + +G+ +
Sbjct: 2 IPTLEWTPEGVNFLDQTKLPLEETYVLATDYKQVATVIRDMIVRGAPAIGVSAAMGVAIG 61
Query: 64 I---------------------------------------KD-------KQFPDNEL--- 74
I +D K P E+
Sbjct: 62 IDRSTATTIPALNEEVAVICETLAKTRPTAVNLFWGIAQVRDLYNELAAKNTPIREIKAA 121
Query: 75 -IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ L + + ++DI+ K +G +GA L P+ + VLTHCN G+LAT YG+ALGVI
Sbjct: 122 VVALGQRLYDEDIAACKRMGAHGAS----LMPK--EGTVLTHCNAGALATCGYGSALGVI 175
Query: 134 R-SLHGANKIVDIKDKQFP 151
R ++ +KI D+ P
Sbjct: 176 RGAIEAGHKIHVFADETRP 194
>gi|21231027|ref|NP_636944.1| methylthioribose-1-phosphate isomerase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768968|ref|YP_243730.1| methylthioribose-1-phosphate isomerase [Xanthomonas campestris pv.
campestris str. 8004]
gi|81305068|sp|Q4UTB3.1|MTNA_XANC8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|81794793|sp|Q8PAB2.1|MTNA_XANCP RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218527025|sp|B0RUX9.2|MTNA_XANCB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|21112652|gb|AAM40868.1| initiation factor eIF-2B [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574300|gb|AAY49710.1| initiation factor eIF-2B [Xanthomonas campestris pv. campestris
str. 8004]
Length = 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A A P + L + +++ ++D++ N+ +G G
Sbjct: 97 LNAARPTAVNLAWALMRMRRVL---AAAGP--DWRDVLAREAQAIADEDLAANRHMGALG 151
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 152 AGLI---APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 15 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKD------------------------------------------KQFPD--NELIQLIE 79
++ PD + L + +
Sbjct: 75 AREIAADSGSEALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLAREAQ 134
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA + VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIADEDLAANRHMGALGAGLI------APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 QRISKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 232 MKSGLVQWV 240
>gi|206896334|ref|YP_002247418.1| translation initiation factor eIF-2B subunit alpha
[Coprothermobacter proteolyticus DSM 5265]
gi|206738951|gb|ACI18029.1| translation initiation factor eIF-2B alpha subunit
[Coprothermobacter proteolyticus DSM 5265]
Length = 341
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 9/126 (7%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
++D LV+ARPTAVN+K+ +S+ + A+ V + + +ES L +D+ ++
Sbjct: 80 RVDLLVNARPTAVNLKKEVESILEDIPMTAEPYEVAAIVYEKVLSLESRLR---NDDLSL 136
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
+GA DL G K +LT CNTG+LAT GTALG+I+ H + AY ETRP
Sbjct: 137 AMHGA----DLLKG--KRRILTICNTGTLATGGIGTALGIIKVKHSKGDLDVAYLCETRP 190
Query: 283 YNQGAR 288
QGAR
Sbjct: 191 VLQGAR 196
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 54/181 (29%)
Query: 4 LQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+Q + Y++ + L +LDQ LLP + V + +++ +AIK+++VRGAP + + G GL+
Sbjct: 2 IQPLQYDRETGTLFLLDQTLLPDEERYVQVKTLDELIEAIKALRVRGAPLLGLAGAYGLL 61
Query: 62 VDI----KDKQFPDN----------------ELIQLIESMLEKDI--------------- 86
+ K F + L + +ES+LE DI
Sbjct: 62 FAVLESEKSALFWEELQRRVDLLVNARPTAVNLKKEVESILE-DIPMTAEPYEVAAIVYE 120
Query: 87 ----------SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+D+ ++ +GA L K +LT CNTG+LAT GTALG+I+
Sbjct: 121 KVLSLESRLRNDDLSLAMHGADLL------KGKRRILTICNTGTLATGGIGTALGIIKVK 174
Query: 137 H 137
H
Sbjct: 175 H 175
>gi|428303914|ref|YP_007140739.1| Methylthioribose-1-phosphate isomerase [Crinalium epipsammum PCC
9333]
gi|428245449|gb|AFZ11229.1| Methylthioribose-1-phosphate isomerase [Crinalium epipsammum PCC
9333]
Length = 351
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A ++ + S+ V+ +K +++ + + +DI +AIG G
Sbjct: 91 LRQTRPTAVNLFWAIAQMQKTASQ--TIGSVDYLKQVMLETAKKINAEDIQTCQAIGDAG 148
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L P KL +LTHCN G+LATA YGTALGV+RS A ++ Y ETRP QG
Sbjct: 149 LKVLPS-KP--DKLCLLTHCNAGALATAGYGTALGVVRSAWRAERLARVYADETRPRLQG 205
Query: 287 AR 288
AR
Sbjct: 206 AR 207
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 50/186 (26%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+++ + ++DQ LP V+I+ +D QAIK+M VRGAPAI + G+ + ++
Sbjct: 12 VIWKEDRVLLIDQNKLPTEYTFVEISRSDDMAQAIKTMIVRGAPAIGVAAAYGMYLGARE 71
Query: 67 KQFPD-NELIQLIES---------------------------------------MLE--- 83
+ + +E + +E MLE
Sbjct: 72 IETDNRDEFLTRLEQVAQMLRQTRPTAVNLFWAIAQMQKTASQTIGSVDYLKQVMLETAK 131
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+DI +AIG G + L + KL +LTHCN G+LATA YGTALGV+RS A
Sbjct: 132 KINAEDIQTCQAIGDAGLKVLPS---KPDKLCLLTHCNAGALATAGYGTALGVVRSAWRA 188
Query: 140 NKIVDI 145
++ +
Sbjct: 189 ERLARV 194
>gi|386827836|ref|ZP_10114943.1| S-methyl-5-thioribose-1-phosphate isomerase [Beggiatoa alba B18LD]
gi|386428720|gb|EIJ42548.1| S-methyl-5-thioribose-1-phosphate isomerase [Beggiatoa alba B18LD]
Length = 349
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 97/218 (44%), Gaps = 61/218 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+++ ++ + L+++DQ LPH +++ + + QAI M VRGAPAI I G+V+
Sbjct: 7 TLRAVTWQDNKLQLIDQRKLPHHHEILSLETAQATAQAIHDMVVRGAPAIGITAAYGVVL 66
Query: 63 DIKD--KQFPDNELIQLIESMLEKDI---SDNKAIGRNGAQALIDLNPRVSKLN------ 111
++ +Q P + + +++ KDI ++++ N AL + ++N
Sbjct: 67 AAREAYRQSPTDWM-----ALIGKDIEALANSRPTAVNLFWALRQMQALFPQINGDPEPV 121
Query: 112 --------------------------------VLTHCNTGSLATAEYGTALGVIRSLHGA 139
VLTHCNTGSLAT YGTALGVIR+ +
Sbjct: 122 LLAAAQQIQQADIAANYFMGELGASYLPQGKSVLTHCNTGSLATGGYGTALGVIRNGYAT 181
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
KI + Y E +L AR TA +
Sbjct: 182 GKIKHV-------------YADETRPWLQGARLTAWEL 206
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDISD 218
+G+ ++ L ++RPTAVN+ A +++ + PV L+ + + + DI+
Sbjct: 83 IGKDIEALANSRPTAVNLFWALRQMQALFPQINGDPEPV------LLAAAQQIQQADIAA 136
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
N +G GA L +VLTHCNTGSLAT YGTALGVIR+ + KI Y
Sbjct: 137 NYFMGELGASYL------PQGKSVLTHCNTGSLATGGYGTALGVIRNGYATGKIKHVYAD 190
Query: 279 ETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 191 ETRPWLQGAR 200
>gi|219850401|ref|YP_002464834.1| translation initiation factor, aIF-2BI family [Chloroflexus
aggregans DSM 9485]
gi|219544660|gb|ACL26398.1| translation initiation factor, aIF-2BI family [Chloroflexus
aggregans DSM 9485]
Length = 357
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 67/225 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+++ +E +++++DQ LPHT ++V+ ++ AI+SMQVRGAPAI G+ +
Sbjct: 13 FRTVWWEDETVRLIDQRKLPHTVEVVNCTDLSSVAYAIRSMQVRGAPAIGCTAAYGMALV 72
Query: 63 --------------------DIKDKQFPD---------------------------NELI 75
I D Q P L+
Sbjct: 73 ARQSAAHSVEDLLEELRQAKAILDAQRPTAVNLAWATSRMLRRAETAASEGTTAIKTVLL 132
Query: 76 QLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E++ +D++ AIG +GA + PR +VLTHCN G LATA YGTAL IR+
Sbjct: 133 AEAEAIFAEDLAMCHAIGEHGAPL---IPPRG---HVLTHCNAGGLATAGYGTALAPIRT 186
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
F + +V E +L AR TA + +A
Sbjct: 187 -------------AFAQGRPIHVFVDETRPFLQGARLTAWELLQA 218
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN+ A + +E A + +KT L+ E++ +D++ AIG +GA
Sbjct: 99 RPTAVNLAWATSRMLRR-AETAASEGTTAIKTVLLAEAEAIFAEDLAMCHAIGEHGA--- 154
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L P + +VLTHCN G LATA YGTAL IR+ + + ETRP+ QGAR
Sbjct: 155 -PLIP--PRGHVLTHCNAGGLATAGYGTALAPIRTAFAQGRPIHVFVDETRPFLQGAR 209
>gi|440731228|ref|ZP_20911266.1| methylthioribose-1-phosphate isomerase [Xanthomonas translucens
DAR61454]
gi|440374456|gb|ELQ11186.1| methylthioribose-1-phosphate isomerase [Xanthomonas translucens
DAR61454]
Length = 354
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A ++++L A+ + + + +++ E+D++ N+ +G
Sbjct: 94 LQRLNAARPTAVNLAWALMRMRNTL-----AAAGADWREAIARQAQAIAEEDLAANRHMG 148
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+
Sbjct: 149 VLGA-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQGRIAKVFAGETRPW 202
Query: 284 NQGAR 288
QGAR
Sbjct: 203 LQGAR 207
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 109/249 (43%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + + + + AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGEALELLDQRKLPFVVEHLQCTDSDQVADAIHTLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESML---------------------------------------- 82
+ Q D + + +E L
Sbjct: 75 ARAVQADDGAQALARLEPALQRLNAARPTAVNLAWALMRMRNTLAAAGADWREAIARQAQ 134
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
E+D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGVLGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 GRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAAAHL 231
Query: 200 VKTRLIQLI 208
+KT ++Q +
Sbjct: 232 MKTGVVQWV 240
>gi|95928917|ref|ZP_01311662.1| Putative translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Desulfuromonas acetoxidans DSM 684]
gi|95134818|gb|EAT16472.1| Putative translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Desulfuromonas acetoxidans DSM 684]
Length = 345
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 69/133 (51%), Gaps = 7/133 (5%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
E E L + RPTAVN+ A D +KS K S + ++ L+ ++ E D
Sbjct: 74 FESQFEECCAVLAATRPTAVNLFWALDRMKSVAKANQKLS-LPDLRQVLLDEALTIAEDD 132
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
N+ +G +G D K N+LTHCN G+LAT YGTALGVIR+ A K
Sbjct: 133 DQINRTMGAHGQVLFPD------KANILTHCNAGALATGGYGTALGVIRAAVEAGKQIEV 186
Query: 276 YCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 187 FADETRPFWQGAR 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 69 FPDNELIQLIESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEY 126
PD + L E++ E D N+ +G +G D K N+LTHCN G+LAT Y
Sbjct: 114 LPDLRQVLLDEALTIAEDDDQINRTMGAHGQVLFPD------KANILTHCNAGALATGGY 167
Query: 127 GTALGVIRSLHGANKIVDI 145
GTALGVIR+ A K +++
Sbjct: 168 GTALGVIRAAVEAGKQIEV 186
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP 50
S++ I +E +++DQ LLP +D + +AI++M VRGAP
Sbjct: 2 SIKPIEFENGVCRMIDQRLLPAQEVWLDYRDYRSVAEAIQTMVVRGAP 49
>gi|297182059|gb|ADI18233.1| predicted translation initiation factor 2b subunit, eif-2b
alpha/beta/delta family [uncultured gamma
proteobacterium HF0200_40H22]
Length = 369
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 6/136 (4%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
DS + ++ E L+S+RPTAVN++ A D + L E ++ + + +L + + +
Sbjct: 73 DSDKIHLQEAYHELLSSRPTAVNLRWALDRMLPLLLEAPESGRADLAR----ELAQQICD 128
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D++ N AIG +G + + S LN+LTHCN G LAT ++GTAL I H
Sbjct: 129 EDVATNSAIGDHGLTLISEAAKACSHRPLNILTHCNAGWLATVDWGTALAPIFKAHDQGI 188
Query: 272 IGAAYCTETRPYNQGA 287
+ + ETRP NQGA
Sbjct: 189 LVHVWVDETRPRNQGA 204
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 42/186 (22%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------D 63
EK + ++DQ LLP T K+ + + AI+ M VRGAP I GL + D
Sbjct: 16 EKPEVLVIDQTLLPFTFKVRTLKTSSETALAIREMVVRGAPLIGATAACGLFLAATIDSD 75
Query: 64 IKDKQFPDNELI---------------------------------QLIESMLEKDISDNK 90
Q +EL+ +L + + ++D++ N
Sbjct: 76 KIHLQEAYHELLSSRPTAVNLRWALDRMLPLLLEAPESGRADLARELAQQICDEDVATNS 135
Query: 91 AIGRNGAQALIDLNPRVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
AIG +G + + S LN+LTHCN G LAT ++GTAL I H +V + D
Sbjct: 136 AIGDHGLTLISEAAKACSHRPLNILTHCNAGWLATVDWGTALAPIFKAHDQGILVHVWVD 195
Query: 148 KQFPDN 153
+ P N
Sbjct: 196 ETRPRN 201
>gi|310826370|ref|YP_003958727.1| translation initiation factor 2B subunit I [Eubacterium limosum
KIST612]
gi|308738104|gb|ADO35764.1| translation initiation factor 2B subunit I [Eubacterium limosum
KIST612]
Length = 344
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 7/122 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A D ++ + A+ +P + L +++ +DI + +G G
Sbjct: 83 LRATRPTAVNLFWAVDRMEGVIENNAEKTPAE-ITALLKTEADAICSEDIQMCRDMGAYG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ + K +LTHCN G+LATA+YGTALGV+R+ A K + Y ETRP+ QG
Sbjct: 142 AELI------HRKDTILTHCNAGALATADYGTALGVVRAAWEAGKEISVYADETRPFLQG 195
Query: 287 AR 288
AR
Sbjct: 196 AR 197
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ + YE +LK+LDQ LLP + + AI M VRGAPAI + G+
Sbjct: 1 MKPVYYENGALKMLDQTLLPTEEVTHSYTDYREIATAIVDMIVRGAPAIGVTAGYGVYFG 60
Query: 64 -IKDKQFPDNELIQLIESM--------------------LEKDISDNK------------ 90
++ + P ++ +E++ +E I +N
Sbjct: 61 ALEFEGLPREAFLKEMETVCQVLRATRPTAVNLFWAVDRMEGVIENNAEKTPAEITALLK 120
Query: 91 ----AIGRNGAQALIDLNPRVSKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
AI Q D+ ++L +LTHCN G+LATA+YGTALGV+R+ A K
Sbjct: 121 TEADAICSEDIQMCRDMGAYGAELIHRKDTILTHCNAGALATADYGTALGVVRAAWEAGK 180
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ + Y E +L AR TA + +
Sbjct: 181 EISV-------------YADETRPFLQGARLTAYELHK 205
>gi|348026978|ref|YP_004766783.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera elsdenii
DSM 20460]
gi|341823032|emb|CCC73956.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera elsdenii
DSM 20460]
Length = 348
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A + + + +A V L + ++ E D++ N A+ R G
Sbjct: 84 LDAARPTAVNLHWALTQMMACARQ-HEADGAEAVTAVLEEKAIAIHEADVAINTAMARFG 142
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L L L +LTHCN G+LATA GTALGVIR LH + Y ETRP QG
Sbjct: 143 ADELEKLG---RPLTLLTHCNAGALATAGVGTALGVIRELHRRGLVSMVYADETRPLLQG 199
Query: 287 AR 288
AR
Sbjct: 200 AR 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
E D++ N A+ R GA L L L +LTHCN G+LATA GTALGVIR LH
Sbjct: 129 EADVAINTAMARFGADELEKLG---RPLTLLTHCNAGALATAGVGTALGVIRELH 180
>gi|355681195|ref|ZP_09061852.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium citroniae
WAL-17108]
gi|354811724|gb|EHE96353.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium citroniae
WAL-17108]
Length = 366
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
DYL S+RPTAVN+ A + + +++ + V +K L Q +++ E+D+ ++ IG
Sbjct: 92 DYLASSRPTAVNLFWALNRMDRTVAA-NQEKDVAEIKELLFQEADAIREEDVQISRVIGE 150
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA---YCTETR 281
G L +L ++ ++THCN G+LATA+YGTA + G A YC ETR
Sbjct: 151 IGFGLLEELKQEGKEIGIMTHCNAGTLATAKYGTATAPMYIALEKGWPGTAMHVYCDETR 210
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 211 PLLQGAR 217
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 48/168 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG-------LVV 62
++ +L I+DQ LLP T K + I+ E+ ++AIK ++VRGAPAI G +
Sbjct: 18 DRSALDIIDQTLLPGTIKRIRISTKEEIWEAIKKLKVRGAPAIGAAAAYGIALLSSRITA 77
Query: 63 DIKDKQFPD----------------------NELIQLIESMLEKDISD------------ 88
D + +P+ N + + + + EKD+++
Sbjct: 78 DRYETFYPEFKELKDYLASSRPTAVNLFWALNRMDRTVAANQEKDVAEIKELLFQEADAI 137
Query: 89 -------NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
++ IG G L +L ++ ++THCN G+LATA+YGTA
Sbjct: 138 REEDVQISRVIGEIGFGLLEELKQEGKEIGIMTHCNAGTLATAKYGTA 185
>gi|322421572|ref|YP_004200795.1| translation initiation factor, aIF-2BI family [Geobacter sp. M18]
gi|320127959|gb|ADW15519.1| translation initiation factor, aIF-2BI family [Geobacter sp. M18]
Length = 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 7/135 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + D L RPTAVN+ + +K ++ K +N+++ L S+
Sbjct: 72 DTFYRQLENVCDVLGRTRPTAVNLFWGLERMKR-VALLHKELDLNSIREILKAEAISIEA 130
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D++ K IGR+GA AL+ G S +LTHCN G LATA YGTALGVIR H A K
Sbjct: 131 EDLAICKEIGRHGA-ALV--KEGAS---ILTHCNAGGLATAGYGTALGVIRGAHEAGKGI 184
Query: 274 AAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 185 RVFADETRPWLQGAR 199
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 21/109 (19%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
S+ +D++ K IGR+GA AL+ ++LTHCN G LATA YGTALGVIR H A
Sbjct: 127 SIEAEDLAICKEIGRHGA-ALVK-----EGASILTHCNAGGLATAGYGTALGVIRGAHEA 180
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
K + + F D E +L AR TA + + DS+ +L
Sbjct: 181 GKGIRV----FAD---------ETRPWLQGARLTAWELMK--DSIPVTL 214
>gi|410721903|ref|ZP_11361226.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanobacterium sp.
Maddingley MBC34]
gi|410598146|gb|EKQ52736.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanobacterium sp.
Maddingley MBC34]
Length = 342
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 24/136 (17%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
++ +EK E D ARPTAVN+ A D V +S + +K ++ M
Sbjct: 97 DEDMEKAAQEMKD----ARPTAVNLFWAVDRVMAS---------DDPIKEAIL-----MY 138
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
E+D+ N+ +GR GA + D + +LTHCN G+LA +YGTALGVIR+ + K
Sbjct: 139 EEDMDTNRRMGRYGATVIDDDD------TILTHCNAGALACVDYGTALGVIRAANQEGKN 192
Query: 273 GAAYCTETRPYNQGAR 288
+ C ETRP QGAR
Sbjct: 193 ISVVCDETRPVLQGAR 208
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 32/145 (22%)
Query: 23 PHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------------DIKDKQF 69
PH ++ + +D AIK+M VRGAPAI + G+ + ++KD +
Sbjct: 53 PHETEYLVCGTYQDVITAIKTMVVRGAPAIGVAAAFGMALAYLADEDMEKAAQEMKDARP 112
Query: 70 PDNELIQLIES-------------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHC 116
L ++ M E+D+ N+ +GR GA + D + +LTHC
Sbjct: 113 TAVNLFWAVDRVMASDDPIKEAILMYEEDMDTNRRMGRYGATVIDDDD------TILTHC 166
Query: 117 NTGSLATAEYGTALGVIRSLHGANK 141
N G+LA +YGTALGVIR+ + K
Sbjct: 167 NAGALACVDYGTALGVIRAANQEGK 191
>gi|186685525|ref|YP_001868721.1| methylthioribose-1-phosphate isomerase [Nostoc punctiforme PCC
73102]
gi|218526919|sp|B2J5P6.1|MTNA_NOSP7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|186467977|gb|ACC83778.1| putative translation initiation factor, aIF-2BI family [Nostoc
punctiforme PCC 73102]
Length = 353
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ ++ ++DQ LP+ V+I+ ED +AIK+M VRGAPAI + G+ + ++
Sbjct: 11 VIWHNGAVSLIDQTRLPNEYTFVEIHRSEDMARAIKTMIVRGAPAIGVAAAYGMYLGARE 70
Query: 67 KQFPDNE-----------------------------------------------LIQLIE 79
+ D L Q +
Sbjct: 71 IETSDRHEFLQNLDKVAQLLGSTRPTAVNLFWAISRMMKVAKETLGTVEDIKQTLFQTAQ 130
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ +AIG NG L L KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 131 AINVEDLQTCQAIGDNG---LTVLPASPEKLTLLTHCNAGALATAGYGTALGVVRS 183
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + E V +K L Q +++ +D+ +AIG NG
Sbjct: 90 LGSTRPTAVNLFWAISRMMKVAKE--TLGTVEDIKQTLFQTAQAINVEDLQTCQAIGDNG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L L KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 148 ---LTVLPASPEKLTLLTHCNAGALATAGYGTALGVVRSAWREGRLERLFADETRPRLQG 204
Query: 287 AR 288
A+
Sbjct: 205 AK 206
>gi|323702681|ref|ZP_08114342.1| translation initiation factor, aIF-2BI family [Desulfotomaculum
nigrificans DSM 574]
gi|323532344|gb|EGB22222.1| translation initiation factor, aIF-2BI family [Desulfotomaculum
nigrificans DSM 574]
Length = 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
GA +I K+F + LE GE L + RPTAVN+ A D + ++ + V
Sbjct: 60 GAKQINTTDRKEF--LEKLEAIAGE----LRATRPTAVNLAWALDRMLMRVNT-SSEQDV 112
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
++ +++ ++ ++D+ N+ +G G + L P ++ VLTHCN G+LATA YG
Sbjct: 113 EKIRRVMLEEAHAIYQEDVQSNRKMGEFGQELL----PNGAR--VLTHCNAGALATAGYG 166
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ K + + ETRP QGAR
Sbjct: 167 TALGVIRAAKEKGKEVSVFADETRPLLQGAR 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +II+E L++LDQ LP T + ++ + ++IK + VRGAPAI GLV+
Sbjct: 1 MDAIIWENDHLRLLDQTKLPGTMEYIECYDYRTVAESIKRLAVRGAPAIGAAAAYGLVLG 60
Query: 64 IKDKQFPDN-ELIQLIES----------------------------------------ML 82
K D E ++ +E+ ML
Sbjct: 61 AKQINTTDRKEFLEKLEAIAGELRATRPTAVNLAWALDRMLMRVNTSSEQDVEKIRRVML 120
Query: 83 EK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+ D+ N+ +G G + L P ++ VLTHCN G+LATA YGTALGVIR+
Sbjct: 121 EEAHAIYQEDVQSNRKMGEFGQELL----PNGAR--VLTHCNAGALATAGYGTALGVIRA 174
Query: 136 LHGANKIVDI 145
K V +
Sbjct: 175 AKEKGKEVSV 184
>gi|297171875|gb|ADI22863.1| predicted translation initiation factor 2B subunit, eIF-2B
alpha/beta/delta family [uncultured gamma
proteobacterium HF0500_32L01]
Length = 369
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D ++++ D L++ARPTAVN++ A + + L + +P + + IQ +E + E
Sbjct: 73 DPSDEHLLSAADGLLAARPTAVNLRWAVEQI---LPQILAVAPSDRFELARIQ-VEKLCE 128
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+DI+ N IG G L +L LN+LTHCN G LAT ++GTAL I + A
Sbjct: 129 EDIASNSRIGDYGFALLQELYLQKSAEQPLNILTHCNAGWLATVDWGTALAPIFKAYDAG 188
Query: 271 KIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 189 LQVHVWVDETRPRNQGA 205
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIR 134
+E + E+DI+ N IG G L +L + S LN+LTHCN G LAT ++GTAL I
Sbjct: 123 VEKLCEEDIASNSRIGDYGFALLQELYLQKSAEQPLNILTHCNAGWLATVDWGTALAPIF 182
Query: 135 SLHGANKIVDIK-DKQFPDN 153
+ A V + D+ P N
Sbjct: 183 KAYDAGLQVHVWVDETRPRN 202
>gi|386811551|ref|ZP_10098776.1| putative translation initiation factor [planctomycete KSU-1]
gi|386403821|dbj|GAB61657.1| putative translation initiation factor [planctomycete KSU-1]
Length = 352
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
I+ I+D D D+ K + + + YL S+RPTAVN+ ++ E K S V+ +K
Sbjct: 63 ILGIRDIHTKDMDTFLKELRQVVTYLGSSRPTAVNLFWGLTRMERIAQENKKRS-VHEIK 121
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
L+Q + +D + IG NGA + D N +LTHCN G LATA+YGTAL
Sbjct: 122 EALLQEALKIQNEDKIICRQIGENGAGFIKDGN------GILTHCNAGGLATADYGTALA 175
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
V+ K Y ETRP QG+R
Sbjct: 176 VLFRAKEQGKRIHVYADETRPLLQGSR 202
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 84/181 (46%), Gaps = 57/181 (31%)
Query: 4 LQSIIYE---KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
L +I +E K ++++DQ LLP+ K V +++ + AIK++ VRGAPAI I G +G+
Sbjct: 3 LPTIEWEGDIKGRIRLIDQTLLPNELKFVYCEDIKSIWHAIKTLMVRGAPAIGIAGAMGV 62
Query: 61 VVDIKDKQFPD-----NELIQLIESM----------------LEKDISDNK--------- 90
++ I+D D EL Q++ + +E+ +NK
Sbjct: 63 ILGIRDIHTKDMDTFLKELRQVVTYLGSSRPTAVNLFWGLTRMERIAQENKKRSVHEIKE 122
Query: 91 ------------------AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
IG NGA + D N +LTHCN G LATA+YGTAL V
Sbjct: 123 ALLQEALKIQNEDKIICRQIGENGAGFIKDGN------GILTHCNAGGLATADYGTALAV 176
Query: 133 I 133
+
Sbjct: 177 L 177
>gi|429120136|ref|ZP_19180821.1| Methylthioribose-1-phosphate isomerase [Cronobacter sakazakii 680]
gi|426325382|emb|CCK11558.1| Methylthioribose-1-phosphate isomerase [Cronobacter sakazakii 680]
Length = 270
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ L+ L +ARPTAVN+ D +K +L++ + + RL+Q + E+
Sbjct: 6 LGQALEVLRAARPTAVNLMNNLDRMKQALTQPDFVAALGAEALRLVQEDRELCER----- 60
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I R G++ + PG S+L LTHCNTG LATA GTALGVI H A K+ + E
Sbjct: 61 --IARAGSELV---KPG-SRL--LTHCNTGGLATAGVGTALGVIARAHEAGKVANVWVDE 112
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 113 TRPLLQGGR 121
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 25/34 (73%)
Query: 112 VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+LTHCNTG LATA GTALGVI H A K+ ++
Sbjct: 75 LLTHCNTGGLATAGVGTALGVIARAHEAGKVANV 108
>gi|417792901|ref|ZP_12440208.1| hypothetical protein CSE899_20313 [Cronobacter sakazakii E899]
gi|449307328|ref|YP_007439684.1| hypothetical protein CSSP291_03985 [Cronobacter sakazakii SP291]
gi|333953008|gb|EGL71003.1| hypothetical protein CSE899_20313 [Cronobacter sakazakii E899]
gi|449097361|gb|AGE85395.1| hypothetical protein CSSP291_03985 [Cronobacter sakazakii SP291]
Length = 339
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ LD L +ARPTAVN+ D +K +L++ + + RL+Q + E+
Sbjct: 75 LGQALDVLRAARPTAVNLMNNLDRMKQALTQPDFVAALGAEALRLVQEDRELCER----- 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I R G++ + PG S+L LTHCNTG LATA GTALGVI H A + + E
Sbjct: 130 --IARAGSELV---KPG-SRL--LTHCNTGGLATAGVGTALGVIARAHEAGNVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 42/182 (23%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG-- 56
M++LQ S+ + L ILDQ LP + +N E I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVVDNKLWILDQQALPQQKNWLPADNTEALVGHIHALRVRGAPLIGLSASL 60
Query: 57 -------------CLGLVVDIKDKQFPD-----NELIQLIESMLEKDISDNKAIGRNGAQ 98
LG +D+ P N L ++ +++ + D + GA+
Sbjct: 61 LLALLAEHGMTRDALGQALDVLRAARPTAVNLMNNLDRMKQALTQPDF-----VAALGAE 115
Query: 99 ALI------DLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
AL +L R+++ +LTHCNTG LATA GTALGVI H A +
Sbjct: 116 ALRLVQEDRELCERIARAGSELVKPGSRLLTHCNTGGLATAGVGTALGVIARAHEAGNVA 175
Query: 144 DI 145
++
Sbjct: 176 NV 177
>gi|333923295|ref|YP_004496875.1| methylthioribose-1-phosphate isomerase [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|333748856|gb|AEF93963.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 346
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
GA +I K+F + LE GE L + RPTAVN+ A D + ++ + V
Sbjct: 60 GAKQINTTDRKEF--LEKLEAIAGE----LRATRPTAVNLAWALDRMLMRVNT-SSEQDV 112
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
++ +++ ++ ++D+ N+ +G G + L P ++ VLTHCN G+LATA YG
Sbjct: 113 EKIRRVMLEEAHAIYQEDVQSNRKMGEFGQELL----PNGAR--VLTHCNAGALATAGYG 166
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR+ K + + ETRP QGAR
Sbjct: 167 TALGVIRAAKEKGKEVSVFADETRPLLQGAR 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 54/190 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +II+E L++LDQ LP T + ++ + ++IK + VRGAPAI GLV+
Sbjct: 1 MDAIIWENDHLRLLDQTKLPGTMEYIECYDYRKVAESIKRLAVRGAPAIGAAAAYGLVLG 60
Query: 64 IKDKQFPDN-ELIQLIES----------------------------------------ML 82
K D E ++ +E+ ML
Sbjct: 61 AKQINTTDRKEFLEKLEAIAGELRATRPTAVNLAWALDRMLMRVNTSSEQDVEKIRRVML 120
Query: 83 EK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+ D+ N+ +G G + L P ++ VLTHCN G+LATA YGTALGVIR+
Sbjct: 121 EEAHAIYQEDVQSNRKMGEFGQELL----PNGAR--VLTHCNAGALATAGYGTALGVIRA 174
Query: 136 LHGANKIVDI 145
K V +
Sbjct: 175 AKEKGKEVSV 184
>gi|444918090|ref|ZP_21238171.1| Methylthioribose-1-phosphate isomerase [Cystobacter fuscus DSM
2262]
gi|444710298|gb|ELW51283.1| Methylthioribose-1-phosphate isomerase [Cystobacter fuscus DSM
2262]
Length = 371
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 78/172 (45%), Gaps = 43/172 (25%)
Query: 2 KSLQSIIYEKH-SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG---- 56
K+++SI E + S+ I+DQ LPH + + +E+A AI+SMQVRGAP I
Sbjct: 6 KAMRSIWAEPNGSVGIIDQTRLPHAFVTLRLTTLEEAAHAIRSMQVRGAPLIGATAAYGV 65
Query: 57 CLGLVVDIKDKQFPD-----------------------NELIQLIESMLEK--------- 84
CL L VD D L L S EK
Sbjct: 66 CLALRVDASDGALERACALLQATRPTAINLKWALDGMRRALHHLSPSEREKAAWAHAAAL 125
Query: 85 ---DISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
D++ N AIGRNG Q + R ++NVLTHCN G LAT ++GTAL
Sbjct: 126 CDEDVAINHAIGRNGLALIQEAWERKGRKGRVNVLTHCNAGWLATVDWGTAL 177
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N+K A D ++ +L SP K ++ ++D++ N AIGRNG
Sbjct: 85 LQATRPTAINLKWALDGMRRALHH---LSPSEREKA-AWAHAAALCDEDVAINHAIGRNG 140
Query: 227 ---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
Q + ++NVLTHCN G LAT ++GTAL + + ETRP
Sbjct: 141 LALIQEAWERKGRKGRVNVLTHCNAGWLATVDWGTALAPLYLAQNEGLPVHVWVDETRPR 200
Query: 284 NQGA 287
NQGA
Sbjct: 201 NQGA 204
>gi|46578501|ref|YP_009309.1| aIF-2BI family translation initiation factor [Desulfovibrio
vulgaris str. Hildenborough]
gi|120603915|ref|YP_968315.1| eIF-2B alpha/beta/delta-like protein [Desulfovibrio vulgaris DP4]
gi|387151985|ref|YP_005700921.1| translation initiation factor, aIF-2BI family [Desulfovibrio
vulgaris RCH1]
gi|81567458|sp|Q72FX9.1|MTNA_DESVH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526612|sp|A1VHH2.1|MTNA_DESVV RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|46447912|gb|AAS94568.1| translation initiation factor, aIF-2BI family, putative
[Desulfovibrio vulgaris str. Hildenborough]
gi|120564144|gb|ABM29888.1| methylthioribose-1-phosphate isomerase [Desulfovibrio vulgaris DP4]
gi|311232429|gb|ADP85283.1| translation initiation factor, aIF-2BI family [Desulfovibrio
vulgaris RCH1]
Length = 350
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 7/125 (5%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
++ + +ARPTAVN++ A + ++++ +A + T+ T + + DI+ N+ +G
Sbjct: 83 IERIANARPTAVNLRWAVERMRAAWHSLGRAD-LATLITYWTNEAKRIHRDDIAINRRMG 141
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+GA+ + D + V+THCN G+LATA YGTALGVIR A K ETRP+
Sbjct: 142 EHGAELIDDGDA------VMTHCNAGALATAGYGTALGVIRGAVEAGKNITVIANETRPF 195
Query: 284 NQGAR 288
QGAR
Sbjct: 196 LQGAR 200
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 74/177 (41%), Gaps = 54/177 (30%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV---GCL----------- 58
SL +LDQ LP + N +D A++ M VRGAPAI + GC+
Sbjct: 13 SLILLDQRYLPTREEDFVCRNTDDIVTALQVMVVRGAPAIGVTAAWGCVLAAYETAESGM 72
Query: 59 --------GLVVDIKDKQFPDNELIQLIESML--------------------------EK 84
GL+ I + + L +E M
Sbjct: 73 ETWRPVLDGLIERIANARPTAVNLRWAVERMRAAWHSLGRADLATLITYWTNEAKRIHRD 132
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
DI+ N+ +G +GA+ + D + V+THCN G+LATA YGTALGVIR A K
Sbjct: 133 DIAINRRMGEHGAELIDDGDA------VMTHCNAGALATAGYGTALGVIRGAVEAGK 183
>gi|401680063|ref|ZP_10811987.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. ACP1]
gi|400219190|gb|EJO50061.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. ACP1]
Length = 352
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 18/161 (11%)
Query: 131 GVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE 190
G+I + AN++ + P ++ L + E + L RPTA+N+ A + + + +
Sbjct: 56 GLILAADEANRL------EVPFSEQLSAFY-EWSEELKETRPTAINLAWAVNRIIAIV-- 106
Query: 191 WAKASPVNT---VKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCN 247
KA+P + + R+ Q ++ +D+ N + NGA L G L +LTHCN
Sbjct: 107 --KANPFTSMDEIVDRITQEAIAIHTEDVELNTRMAINGAS----LFKGKQNLRILTHCN 160
Query: 248 TGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LAT GTALGVIR LH ++ Y ETRP QGAR
Sbjct: 161 AGALATGGLGTALGVIRKLHEQGQLEMVYADETRPLLQGAR 201
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 46/180 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I + +L +LDQ LP + + + +AIK ++VRGAPAI + GL++
Sbjct: 1 MNNIEWRDGTLILLDQTKLPTQVEYIHCTDWRRVAEAIKMLRVRGAPAIGVAAGYGLILA 60
Query: 64 IKDK---QFPDNELIQLIESMLE-----KDISDNKAIGRNGAQALIDLNPRVS------- 108
+ + P +E + E + + N A N A++ NP S
Sbjct: 61 ADEANRLEVPFSEQLSAFYEWSEELKETRPTAINLAWAVNRIIAIVKANPFTSMDEIVDR 120
Query: 109 -------------------------------KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
L +LTHCN G+LAT GTALGVIR LH
Sbjct: 121 ITQEAIAIHTEDVELNTRMAINGASLFKGKQNLRILTHCNAGALATGGLGTALGVIRKLH 180
>gi|154151380|ref|YP_001404998.1| aIF-2BI family translation initiation factor [Methanoregula boonei
6A8]
gi|153999932|gb|ABS56355.1| putative translation initiation factor, aIF-2BI family
[Methanoregula boonei 6A8]
Length = 348
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
P D + V D + +RPTAVN+ D V ++ + A+ + KT + ES
Sbjct: 72 PSFDDYARAVLRAADRIRESRPTAVNLSWGVDRV---VARFLAANDETSAKTVTLAEAES 128
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+ D AIG +GA L D + VLTHCN G+LA + +GTALGVIRS A
Sbjct: 129 IAADDTRCCHAIGEHGAALLPD------QCTVLTHCNAGALACSSWGTALGVIRSAVAAG 182
Query: 271 KIGAAYCTETRPYNQGAR 288
K ETRP QGAR
Sbjct: 183 KQVKVIACETRPLLQGAR 200
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 54/193 (27%)
Query: 1 MKSLQSIIYEKH--SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
MK +++ +++ ++ +DQ LLP + +++ AI+ +++RGAPA+ + G
Sbjct: 1 MKETKTLWWDESLGGIRYIDQTLLPTEYAIAGCTDIDQLITAIQRLEIRGAPALGVAGGY 60
Query: 59 GLVVDIKDKQFP------------------------------DNELIQLI---------- 78
G+ + + P D + + +
Sbjct: 61 GVALAARTCTGPSFDDYARAVLRAADRIRESRPTAVNLSWGVDRVVARFLAANDETSAKT 120
Query: 79 ------ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
ES+ D AIG +GA L D + VLTHCN G+LA + +GTALGV
Sbjct: 121 VTLAEAESIAADDTRCCHAIGEHGAALLPD------QCTVLTHCNAGALACSSWGTALGV 174
Query: 133 IRSLHGANKIVDI 145
IRS A K V +
Sbjct: 175 IRSAVAAGKQVKV 187
>gi|83647051|ref|YP_435486.1| translation initiation factor 2B subunit [Hahella chejuensis KCTC
2396]
gi|123532040|sp|Q2SE63.1|MTNA_HAHCH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|83635094|gb|ABC31061.1| predicted translation initiation factor 2B subunit, eIF-2B
alpha/beta/delta family [Hahella chejuensis KCTC 2396]
Length = 341
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D D L + L+ L +RPTAVN+ A ++ + + V + L++ +
Sbjct: 72 DRDRLHR----ALETLADSRPTAVNLFWALRRMRGLID----GASVADLFPLLVEEATRI 123
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
E+D+ N +G GA + + G +LTHCNTGSLAT YGTALGVIRS + +
Sbjct: 124 HEEDLQANLTMGELGADLIAESGRGA----LLTHCNTGSLATGGYGTALGVIRSAYRRDL 179
Query: 272 IGAAYCTETRPYNQGAR 288
+ + ETRP+ QGAR
Sbjct: 180 VTEVFADETRPWLQGAR 196
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 17/104 (16%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ + E+D+ N +G GA DL + +LTHCNTGSLAT YGTALGVI
Sbjct: 116 LVEEATRIHEEDLQANLTMGELGA----DLIAESGRGALLTHCNTGSLATGGYGTALGVI 171
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
RS + + + ++ + E +L AR TA +
Sbjct: 172 RSAYRRDLVTEV-------------FADETRPWLQGARLTAWEL 202
>gi|110834305|ref|YP_693164.1| initiation factor eIF-2B [Alcanivorax borkumensis SK2]
gi|123345513|sp|Q0VPK6.1|MTNA_ALCBS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|110647416|emb|CAL16892.1| initiation factor eIF-2B [Alcanivorax borkumensis SK2]
Length = 346
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 82/166 (49%), Gaps = 26/166 (15%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG AL + Q ND+ + + L +RPTAVN+ A +
Sbjct: 56 TAAYGLAL----------------EAQIMGNDASWVTLQNAVATLADSRPTAVNLFWALE 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
L +A + L + E++ +D++ N+A+G GA DL P S V
Sbjct: 100 R----LQRYAGDLQGKALAQALAEDAEAIHREDLAANQAMGEFGA----DLLP--SGATV 149
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTG+LAT +GTALG+IRS N++ + ETRP+ QG+R
Sbjct: 150 YTHCNTGALATGGHGTALGIIRSAWARNQLTGVFAGETRPWLQGSR 195
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 93/215 (43%), Gaps = 63/215 (29%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
+I + L++LDQ LP + +DI + + A AI++M VRGAPAI I GL +
Sbjct: 7 AIRWLGDHLQLLDQRCLPTETLWLDICDSQQAADAIRNMVVRGAPAIGITAAYGLALEAQ 66
Query: 63 ----------------------------------------DIKDKQFPDNELIQLIESML 82
D++ K L + E++
Sbjct: 67 IMGNDASWVTLQNAVATLADSRPTAVNLFWALERLQRYAGDLQGKALA-QALAEDAEAIH 125
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+D++ N+A+G GA DL P S V THCNTG+LAT +GTALG+IRS N++
Sbjct: 126 REDLAANQAMGEFGA----DLLP--SGATVYTHCNTGALATGGHGTALGIIRSAWARNQL 179
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ + GE +L +R T+ +
Sbjct: 180 TGV-------------FAGETRPWLQGSRLTSWEL 201
>gi|428209084|ref|YP_007093437.1| methylthioribose-1-phosphate isomerase [Chroococcidiopsis thermalis
PCC 7203]
gi|428011005|gb|AFY89568.1| methylthioribose-1-phosphate isomerase [Chroococcidiopsis thermalis
PCC 7203]
Length = 354
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + + E V ++ L+ +++ +D+ +AIG G
Sbjct: 90 LRTTRPTAVNLFWAIARMLKTAYE--TIGTVEEIRQVLLTTAQTIQTEDLQTCQAIGDRG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L+ P ++LN+LTHCN G+LATA YGTALGV+RS ++ Y ETRP QG
Sbjct: 148 LE-LLPKTP--AQLNLLTHCNAGALATAGYGTALGVVRSAWSCGRLSRLYADETRPRLQG 204
Query: 287 AR 288
A+
Sbjct: 205 AK 206
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 52/184 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + S+ ++DQ LP V+I+ ED QAIK+M VRGAPAI I G+ + ++
Sbjct: 11 VIWYEGSVLLIDQTHLPAEYAFVEIHRCEDMAQAIKTMIVRGAPAIGIAAAYGMYLGARE 70
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
+ D E L I ML+
Sbjct: 71 IETHDREQFLSQLEQVAQMLRTTRPTAVNLFWAIARMLKTAYETIGTVEEIRQVLLTTAQ 130
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
+D+ +AIG G ++L P+ ++LN+LTHCN G+LATA YGTALGV+RS
Sbjct: 131 TIQTEDLQTCQAIGDRG----LELLPKTPAQLNLLTHCNAGALATAGYGTALGVVRSAWS 186
Query: 139 ANKI 142
++
Sbjct: 187 CGRL 190
>gi|188992082|ref|YP_001904092.1| methylthioribose-1-phosphate isomerase [Xanthomonas campestris pv.
campestris str. B100]
gi|167733842|emb|CAP52048.1| initiation factor eIF-2B [Xanthomonas campestris pv. campestris]
Length = 371
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 72/122 (59%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A A P + L + +++ ++D++ N+ +G G
Sbjct: 114 LNAARPTAVNLAWALMRMRRVL---AAAGP--DWRDVLAREAQAIADEDLAANRHMGALG 168
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 169 AGLI---APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQQRISKVFAGETRPWLQG 222
Query: 287 AR 288
AR
Sbjct: 223 AR 224
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V ++ + +AI S+ VRGAPAI I G+V+
Sbjct: 32 IRPLLWTGDALELLDQRKLPFVVEHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLA 91
Query: 64 IKD------------------------------------------KQFPD--NELIQLIE 79
++ PD + L + +
Sbjct: 92 AREIAADSGSEALQKLEPALLRLNAARPTAVNLAWALMRMRRVLAAAGPDWRDVLAREAQ 151
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
++ ++D++ N+ +G GA + VLTHCNTGSLATA +GTALGVIR+
Sbjct: 152 AIADEDLAANRHMGALGAGLI------APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 205
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 206 QRISKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 248
Query: 200 VKTRLIQLI 208
+K+ L+Q +
Sbjct: 249 MKSGLVQWV 257
>gi|374628446|ref|ZP_09700831.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanoplanus limicola DSM 2279]
gi|373906559|gb|EHQ34663.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanoplanus limicola DSM 2279]
Length = 346
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 85/183 (46%), Gaps = 52/183 (28%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-----VVD 63
Y S+ ++DQ LLP + + VE +AI+ ++VRGAPA+ + G LG+ V +
Sbjct: 10 YASRSISLIDQTLLPAEYRFKKCSTVEQLAEAIRRLEVRGAPALGVAGGLGIALSAAVSE 69
Query: 64 IKDKQ------FPDNELIQL-----------IESML------------------------ 82
DK D EL++ IE +L
Sbjct: 70 STDKTGMLTGLRRDAELLKATRPTAVNLAWGIERVLKTAEGCGNPEEIKEVTLREAEAVG 129
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
++D + + IG NGA+ L D + VLTHCN G+LA +E+GTALGVIRS A K
Sbjct: 130 DEDAAMCRMIGENGAELLPD------RCTVLTHCNAGALACSEWGTALGVIRSACKAGKE 183
Query: 143 VDI 145
V +
Sbjct: 184 VSV 186
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 9/124 (7%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L + RPTAVN+ + V + + V R E++ ++D + + IG
Sbjct: 85 ELLKATRPTAVNLAWGIERVLKTAEGCGNPEEIKEVTLREA---EAVGDEDAAMCRMIGE 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
NGA+ L D + VLTHCN G+LA +E+GTALGVIRS A K + ETRP N
Sbjct: 142 NGAELLPD------RCTVLTHCNAGALACSEWGTALGVIRSACKAGKEVSVISCETRPLN 195
Query: 285 QGAR 288
QG+R
Sbjct: 196 QGSR 199
>gi|442610403|ref|ZP_21025126.1| Methylthioribose-1-phosphate isomerase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441748179|emb|CCQ11188.1| Methylthioribose-1-phosphate isomerase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 341
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 17/127 (13%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSL--SEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+D L + RPTAVN+ ++ +L S+WA A ++ ES+ E+D++ +
Sbjct: 79 IDDLEATRPTAVNLMHCMAKLRRALKESQWADA---------IVTSAESLFEEDVALCER 129
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ GA+ + + + NVLTHCNTG+LATA GTALGVI H ANK + ETR
Sbjct: 130 MANFGAELVKEGD------NVLTHCNTGALATAGIGTALGVIHQAHVANKGIHVWVDETR 183
Query: 282 PYNQGAR 288
P QG R
Sbjct: 184 PLLQGGR 190
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 46/184 (25%)
Query: 1 MKSL--QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP-------- 50
MK L +S+ ++ + +LDQ LLPH + +VE + I +++VRGAP
Sbjct: 1 MKELVARSLKFQHGVVYVLDQYLLPHKEVWHECRSVEQMAELILTLKVRGAPLIGLAATL 60
Query: 51 ----------------------------AIAIVGCLG-LVVDIKDKQFPDNELIQLIESM 81
A+ ++ C+ L +K+ Q+ D ++ ES+
Sbjct: 61 LVAYLAEQGATKHELASAIDDLEATRPTAVNLMHCMAKLRRALKESQWAD-AIVTSAESL 119
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
E+D++ + + GA+ + + + NVLTHCNTG+LATA GTALGVI H ANK
Sbjct: 120 FEEDVALCERMANFGAELVKEGD------NVLTHCNTGALATAGIGTALGVIHQAHVANK 173
Query: 142 IVDI 145
+ +
Sbjct: 174 GIHV 177
>gi|58426624|gb|AAW75661.1| initiation factor eIF-2B [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 449
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 70/122 (57%), Gaps = 11/122 (9%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ A ++ L A + V R Q I ++D++ N+ +G G
Sbjct: 192 LNAARPTAVNLAWALMRMRRVLG--AAGADWRAVIAREAQAIA---DEDLAANRHMGALG 246
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A ALI GV LTHCNTGSLATA +GTALGVIR+ +I + ETRP+ QG
Sbjct: 247 A-ALIAPGSGV-----LTHCNTGSLATAGFGTALGVIRAGMAQQRIAKVFAGETRPWLQG 300
Query: 287 AR 288
AR
Sbjct: 301 AR 302
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ +++ +L++LDQ LP + V + + +AI S+ VRGAPAI I G+ +
Sbjct: 110 IRPLLWTGDALELLDQRKLPFVVEHVRCDTSDAVAEAIHSLAVRGAPAIGIAAGWGVALA 169
Query: 64 IKDKQFPD-NELIQLIESMLEK------------------------DISDNKAIGRNGAQ 98
+D D N +Q +E L + +D +A+ AQ
Sbjct: 170 ARDIAADDGNAALQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWRAVIAREAQ 229
Query: 99 ALID----LNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A+ D N + L VLTHCNTGSLATA +GTALGVIR+ +I +
Sbjct: 230 AIADEDLAANRHMGALGAALIAPGSGVLTHCNTGSLATAGFGTALGVIRAGMAQQRIAKV 289
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+ GE +L AR T +++ D + ++L A ++ + +K+ L+
Sbjct: 290 -------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHLMKSGLV 332
Query: 206 QLI 208
Q +
Sbjct: 333 QWV 335
>gi|212703849|ref|ZP_03311977.1| hypothetical protein DESPIG_01901 [Desulfovibrio piger ATCC 29098]
gi|212672817|gb|EEB33300.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio piger
ATCC 29098]
Length = 349
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN++ + +++ A + L + E+M +D+ + IGR+G
Sbjct: 88 LEAARPTAVNLRWGVERMRALWQAHAGLEMEELIPVLLAE-AETMRREDVEICREIGRHG 146
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + D + VLTHCN G+LATA YGTALGVIR A K ETRP+ QG
Sbjct: 147 ASCINDGD------TVLTHCNAGALATAGYGTALGVIRGALEAGKKVRVIADETRPFLQG 200
Query: 287 AR 288
AR
Sbjct: 201 AR 202
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 57/190 (30%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD--KQFP 70
+L +LDQ LP + I +++ +A++ M VRGAPAI + G V+ +++ + P
Sbjct: 13 TLYLLDQRALPGREDYLPIRTLDETIRALQVMVVRGAPAIGVTAGFGCVLALEELRRGLP 72
Query: 71 ---------DNELIQL---------------------------------------IESML 82
D L++L E+M
Sbjct: 73 AGADWRTAYDRALVRLEAARPTAVNLRWGVERMRALWQAHAGLEMEELIPVLLAEAETMR 132
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANK 141
+D+ + IGR+GA + D + VLTHCN G+LATA YGTALGVIR +L K
Sbjct: 133 REDVEICREIGRHGASCINDGD------TVLTHCNAGALATAGYGTALGVIRGALEAGKK 186
Query: 142 IVDIKDKQFP 151
+ I D+ P
Sbjct: 187 VRVIADETRP 196
>gi|357038767|ref|ZP_09100564.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum gibsoniae
DSM 7213]
gi|355359559|gb|EHG07321.1| Methylthioribose-1-phosphate isomerase [Desulfotomaculum gibsoniae
DSM 7213]
Length = 344
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN++ A D + L + + V +K L++ ++ +D+ N+ +G G + L
Sbjct: 87 RPTAVNLQWALDRMLRVLHNYTSGN-VEDLKETLLREAHAIYAEDLESNRRMGEFG-EKL 144
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ N + LTHCN G+LATA GTALGVIR+ H A K + Y ETRP QGAR
Sbjct: 145 VPTNAAI-----LTHCNAGALATAGIGTALGVIRAAHQAGKNISVYADETRPLLQGAR 197
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ ++ +D+ N+ +G G + L+ N +LTHCN G+LATA GTALGVI
Sbjct: 119 LLREAHAIYAEDLESNRRMGEFG-EKLVPTNA-----AILTHCNAGALATAGIGTALGVI 172
Query: 134 RSLHGANKIVDI 145
R+ H A K + +
Sbjct: 173 RAAHQAGKNISV 184
>gi|253702341|ref|YP_003023530.1| translation initiation factor, aIF-2BI family [Geobacter sp. M21]
gi|259509711|sp|C6E6Z4.1|MTNA_GEOSM RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|251777191|gb|ACT19772.1| translation initiation factor, aIF-2BI family [Geobacter sp. M21]
Length = 346
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + D + RPTAVN+ + +K + K +N+++ L S+
Sbjct: 72 DTFYRQLENVCDVIGRTRPTAVNLFWGLERMKRVALQ-HKELDLNSIRELLKAEAISIET 130
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D++ K IGR+GA AL+ G S +LTHCN G LATA YGTALGVIR H A K
Sbjct: 131 EDLAICKEIGRHGA-ALV--KEGAS---ILTHCNAGGLATAGYGTALGVIRGAHEAGKGI 184
Query: 274 AAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 185 RVFADETRPWLQGAR 199
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 25/131 (19%)
Query: 62 VDIKDKQFPDNELIQLIE----SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN 117
V ++ K+ N + +L++ S+ +D++ K IGR+GA AL+ ++LTHCN
Sbjct: 105 VALQHKELDLNSIRELLKAEAISIETEDLAICKEIGRHGA-ALVK-----EGASILTHCN 158
Query: 118 TGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
G LATA YGTALGVIR H A K + + F D E +L AR TA +
Sbjct: 159 AGGLATAGYGTALGVIRGAHEAGKGIRV----FAD---------ETRPWLQGARLTAWEL 205
Query: 178 KRAADSVKSSL 188
+ DS+ +L
Sbjct: 206 MK--DSIPVTL 214
>gi|428211176|ref|YP_007084320.1| methylthioribose-1-phosphate isomerase [Oscillatoria acuminata PCC
6304]
gi|427999557|gb|AFY80400.1| methylthioribose-1-phosphate isomerase [Oscillatoria acuminata PCC
6304]
Length = 352
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A +++ + PV+ +K L++ + + D+ +AIG G
Sbjct: 89 LRQTRPTAVNLFWAIARMQTVARQ--TLGPVSYLKKVLLETAQEIQASDLKTCQAIGDYG 146
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A++ P KL +LTHCN G+LATA YGTALGV+RS +++ Y ETRP QG
Sbjct: 147 L-AVLPSTP--QKLRLLTHCNAGALATAGYGTALGVVRSAWRGDRLERVYADETRPRLQG 203
Query: 287 AR 288
A+
Sbjct: 204 AK 205
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+++++ + ++DQ LP LV+I +D +AI++M VRGAPAI + G+ + ++
Sbjct: 10 VVWKEDHVALIDQTRLPTEYALVEIRRYDDMARAIQTMIVRGAPAIGVAAAYGMYLGARE 69
Query: 67 KQFPDN-ELIQLIESMLE------------------------------------------ 83
Q + E + +E++ E
Sbjct: 70 IQTEERGEFLTHLETVAETLRQTRPTAVNLFWAIARMQTVARQTLGPVSYLKKVLLETAQ 129
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D+ +AIG G A++ P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 130 EIQASDLKTCQAIGDYGL-AVLPSTPQ--KLRLLTHCNAGALATAGYGTALGVVRSAWRG 186
Query: 140 NKI 142
+++
Sbjct: 187 DRL 189
>gi|427727665|ref|YP_007073902.1| S-methyl-5-thioribose-1-phosphate isomerase [Nostoc sp. PCC 7524]
gi|427363584|gb|AFY46305.1| S-methyl-5-thioribose-1-phosphate isomerase [Nostoc sp. PCC 7524]
Length = 360
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 83/180 (46%), Gaps = 52/180 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ ++++ +S+ ++DQ LP+ +V+I+ ED +AIK+M VRGAPAI + G+ +
Sbjct: 18 IYPVVWQNNSVTLIDQTRLPNEYAVVEIHRSEDMARAIKTMIVRGAPAIGVAAAYGMYLG 77
Query: 64 IKDKQFPDNE----------------------LIQLIESMLE------------------ 83
++ Q D + L I ML
Sbjct: 78 AREIQTSDRQKFLAHLEQVTELLGSTRPTAVNLFWAINRMLHTAQNTPGTVEDIQQVLFK 137
Query: 84 -------KDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +A+G G L P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 138 TAQAINAEDLHTCQAMGDYGLSVL----PKTPEKLTLLTHCNAGALATAGYGTALGVVRS 193
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASP--VNTVKTR 203
++ Q D ++ + + L S RPTAVN+ A + + + A+ +P V ++
Sbjct: 79 REIQTSDRQKFLAHLEQVTELLGSTRPTAVNLFWAINRMLHT----AQNTPGTVEDIQQV 134
Query: 204 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVI 263
L + +++ +D+ +A+G G L KL +LTHCN G+LATA YGTALGV+
Sbjct: 135 LFKTAQAINAEDLHTCQAMGDYGLSVLPKTP---EKLTLLTHCNAGALATAGYGTALGVV 191
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
RS ++ + ETRP QGA+
Sbjct: 192 RSAWREGRLERLFADETRPRLQGAK 216
>gi|375093959|ref|ZP_09740224.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
marina XMU15]
gi|374654692|gb|EHR49525.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
marina XMU15]
Length = 336
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V + L SARPTAVN++ + ++L A A V +ML +D N
Sbjct: 81 VAADAERLASARPTAVNLRWGVERALAALPRGADAVTAEAV---------AMLTEDELVN 131
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K RN A L+ + L +LTHCNTG LA ++GTALGV+R LH A + E
Sbjct: 132 KQASRNAAD-LVLRHCSRRPLRLLTHCNTGRLAAVDWGTALGVVRHLHAAGHVEYVLADE 190
Query: 280 TRPYNQGAR 288
TRP QG+R
Sbjct: 191 TRPLLQGSR 199
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
+ML +D NK RN A ++ R L +LTHCNTG LA ++GTALGV+R LH A
Sbjct: 122 AMLTEDELVNKQASRNAADLVLRHCSR-RPLRLLTHCNTGRLAAVDWGTALGVVRHLHAA 180
Query: 140 NKI 142
+
Sbjct: 181 GHV 183
>gi|294102022|ref|YP_003553880.1| translation initiation factor, aIF-2BI family [Aminobacterium
colombiense DSM 12261]
gi|293617002|gb|ADE57156.1| translation initiation factor, aIF-2BI family [Aminobacterium
colombiense DSM 12261]
Length = 334
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 80/170 (47%), Gaps = 45/170 (26%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
++ +L +LDQ LLP + N ED QAI+S+ VRGAPAI + G+ + + +
Sbjct: 11 QEKNLCVLDQRLLPWEVSFIFCNTCEDVAQAIESLAVRGAPAIGVAAAYGVALGARKGKL 70
Query: 70 PDNELIQ------------------------------LIESML-------EKDISDNKAI 92
I+ L +L E+DI+ N+ I
Sbjct: 71 EVERAIERLSRTRPTAVNLFWALDRMSQIAAGTEEEKLFSCLLNEAHAIREEDIAINRQI 130
Query: 93 GRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL--HGAN 140
G G Q+L+ PR VLTHCN GSLATA YGTALGVIR+ HG N
Sbjct: 131 GTLG-QSLL---PRDGI--VLTHCNAGSLATAGYGTALGVIRAAREHGKN 174
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V ++ L RPTAVN+ A D +S+ A + + + L+ ++ E+DI+ N
Sbjct: 72 VERAIERLSRTRPTAVNLFWALDR----MSQIAAGTEEEKLFSCLLNEAHAIREEDIAIN 127
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+ IG G Q+L+ + G+ VLTHCN GSLATA YGTALGVIR+ K Y E
Sbjct: 128 RQIGTLG-QSLLPRD-GI----VLTHCNAGSLATAGYGTALGVIRAAREHGKNIKVYADE 181
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 182 TRPVFQGAR 190
>gi|254422955|ref|ZP_05036673.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. PCC 7335]
gi|196190444|gb|EDX85408.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. PCC 7335]
Length = 360
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 143 VDIKDKQFPDNDSLEKYVGE---KLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPV 197
V I +QF S E ++ + YL+ ARPTAVN+ A + + + + A +SP
Sbjct: 60 VAIAARQF-QLSSTESFLADLHSAGQYLIQARPTAVNLAWAVNQLLAIATTQANQGSSPA 118
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
N + L++ + + + DI+ K +G AQALI NP + V+ HCNTGSLA +YG
Sbjct: 119 N-IAANLLKEAQLLYQADIAACKQLG-TYAQALIP-NP----VRVIHHCNTGSLAAVDYG 171
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGA 287
TALGVIR H K + ETRP QGA
Sbjct: 172 TALGVIRIAHEQGKQIHVFLDETRPRLQGA 201
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 56/195 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +L+SI ++ L++LDQ LP + ++ +AI++M VRGAPAI + G+
Sbjct: 1 MSALRSIEWKDDQLRLLDQRKLPAQTVYESYSDYRSVAKAIQTMVVRGAPAIGVTAAFGV 60
Query: 61 VVDIKDKQFPDNE------------LIQ-------------------------------- 76
+ + Q E LIQ
Sbjct: 61 AIAARQFQLSSTESFLADLHSAGQYLIQARPTAVNLAWAVNQLLAIATTQANQGSSPANI 120
Query: 77 ----LIESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
L E+ L + DI+ K +G AQALI NP + V+ HCNTGSLA +YGTAL
Sbjct: 121 AANLLKEAQLLYQADIAACKQLG-TYAQALIP-NP----VRVIHHCNTGSLAAVDYGTAL 174
Query: 131 GVIRSLHGANKIVDI 145
GVIR H K + +
Sbjct: 175 GVIRIAHEQGKQIHV 189
>gi|148654654|ref|YP_001274859.1| aIF-2BI family translation initiation factor [Roseiflexus sp. RS-1]
gi|218526930|sp|A5UQK6.1|MTNA_ROSS1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|148566764|gb|ABQ88909.1| translation initiation factor 2B subunit I family (IF-2BI)
[Roseiflexus sp. RS-1]
Length = 353
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN+ A V SP + V R+++ ++L +D++ AIGR+G AL
Sbjct: 94 RPTAVNLSWATRRVLERAQSLNDPSP-HDVAQRVLEEAHAILAEDLAMCHAIGRHGV-AL 151
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
I + +VLTHCN G LATA YGTAL +R+ H + Y ETRP+ QGAR
Sbjct: 152 IP-----PRGHVLTHCNAGGLATAGYGTALAPVRTAHEQGRPIHVYVDETRPFLQGAR 204
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 76/229 (33%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC----- 57
+ +++ +E + ++DQ LLP+ +++V VED AI++MQ+RGAPAI GC
Sbjct: 4 AFRTVWWEAGQVCLIDQRLLPNETRIVRCAAVEDVAYAIRTMQIRGAPAI---GCAAAYG 60
Query: 58 ------------LGLVVDIK----------DKQFPD------------------------ 71
+G V I D Q P
Sbjct: 61 MALAACSAAHDAVGDVARIYARLAEAKALLDAQRPTAVNLSWATRRVLERAQSLNDPSPH 120
Query: 72 ---NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGT 128
+++ ++L +D++ AIGR+G ALI + +VLTHCN G LATA YGT
Sbjct: 121 DVAQRVLEEAHAILAEDLAMCHAIGRHGV-ALIP-----PRGHVLTHCNAGGLATAGYGT 174
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
AL +R+ H + + + YV E +L AR TA +
Sbjct: 175 ALAPVRTAHEQGRPIHV-------------YVDETRPFLQGARLTAWEL 210
>gi|288870670|ref|ZP_06114913.2| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium hathewayi
DSM 13479]
gi|288866310|gb|EFC98608.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium hathewayi
DSM 13479]
Length = 363
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADS-VKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
S Y E+ +YL S+RPTAVN+ AAD VK + + + P+ VK L ++ E
Sbjct: 88 SFLDYFREQGEYLKSSRPTAVNLMWAADRMVKRAETLVDEGYPMEAVKKELEAEAVAIHE 147
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+D N+ IG N L D + VLTHCN GSLAT+EYGTAL V
Sbjct: 148 EDKQTNRNIGENLLSLLKDGD------TVLTHCNAGSLATSEYGTALSVFYMAQEKGMNI 201
Query: 274 AAYCTETRPYNQGA 287
A+ ETRP QGA
Sbjct: 202 KAFADETRPRLQGA 215
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 56/183 (30%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M+ + ++ +EK +L +LDQ LLP+T V ++ED YQAI++M VRGAPAI + G+
Sbjct: 15 MREIITLKWEKGNLFLLDQTLLPNTVTYVACKSLEDVYQAIQTMIVRGAPAIGVSAGYGM 74
Query: 61 VVD----------------------------------------------IKDKQFPDNEL 74
V+ + D+ +P +
Sbjct: 75 VLSANAFDGTETASFLDYFREQGEYLKSSRPTAVNLMWAADRMVKRAETLVDEGYPMEAV 134
Query: 75 IQLIE----SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
+ +E ++ E+D N+ IG N L D + VLTHCN GSLAT+EYGTAL
Sbjct: 135 KKELEAEAVAIHEEDKQTNRNIGENLLSLLKDGD------TVLTHCNAGSLATSEYGTAL 188
Query: 131 GVI 133
V
Sbjct: 189 SVF 191
>gi|395493260|ref|ZP_10424839.1| methylthioribose-1-phosphate isomerase [Sphingomonas sp. PAMC
26617]
Length = 355
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 27/169 (15%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A A YG AL + + P ++SL++ D LVS RPTAVN++ A
Sbjct: 60 AVAAYGIALAL---------------RADPGDESLDR----AFDRLVSTRPTAVNLRWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG---AQALIDLNPGVS 238
D V+ ++ P ++ + D+ N AIGR G Q+L+ +PG
Sbjct: 101 DRVRGVVTR----LPERDRAAAAYVEAGAICDADVEVNAAIGRAGLVILQSLVAAHPG-R 155
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCN G LAT ++GTA + H + ETRP NQGA
Sbjct: 156 AINILTHCNAGWLATVDWGTATAPLYMAHDLGIPLHVWVDETRPRNQGA 204
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 45/177 (25%)
Query: 5 QSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+SI E S+ I DQ LP + + + +E AI M RGAP I V G+ +
Sbjct: 9 RSIWLEPDGWSVGIFDQRRLPWAVERLRLTTMEACALAIADMATRGAPLIGAVAAYGIAL 68
Query: 63 DIK--------DKQF---------------------------PDNE----LIQLIESMLE 83
++ D+ F P+ + ++ +
Sbjct: 69 ALRADPGDESLDRAFDRLVSTRPTAVNLRWALDRVRGVVTRLPERDRAAAAYVEAGAICD 128
Query: 84 KDISDNKAIGRNGA---QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
D+ N AIGR G Q+L+ +P +N+LTHCN G LAT ++GTA + H
Sbjct: 129 ADVEVNAAIGRAGLVILQSLVAAHPG-RAINILTHCNAGWLATVDWGTATAPLYMAH 184
>gi|75909750|ref|YP_324046.1| methylthioribose-1-phosphate isomerase [Anabaena variabilis ATCC
29413]
gi|123608724|sp|Q3M785.1|MTNA_ANAVT RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|75703475|gb|ABA23151.1| methylthioribose-1-phosphate isomerase [Anabaena variabilis ATCC
29413]
Length = 347
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 85/152 (55%), Gaps = 13/152 (8%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSA-RPTAVNMKRAADSVKSSLSEWAKASP 196
GA +I + ++F L+K EK+ L+ A RPTAVN+ A + + E
Sbjct: 61 GAREIETSERQEF-----LQKL--EKVAQLLRATRPTAVNLFWAISRMLKTAYE--TLGT 111
Query: 197 VNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEY 256
V +K L+Q +++ +D+ + IG NG A++ P +KL +LTHCN G+LATA Y
Sbjct: 112 VAQIKENLLQTAQAINAEDLQTCQVIGDNGL-AILPKTP--TKLTLLTHCNAGALATAGY 168
Query: 257 GTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
GTALGV+RS ++ + ETRP QGA+
Sbjct: 169 GTALGVVRSAWREGRLERLFADETRPRLQGAK 200
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I++ + + ++DQ LP+ +V+I+ E+ +AI++M VRGAPAI + G+ + ++
Sbjct: 5 VIWQNNCVLLIDQTRLPNEYAVVEIHRSEEMARAIQTMIVRGAPAIGVAAAYGMYLGARE 64
Query: 67 KQFPDNE-----------------------------------------------LIQLIE 79
+ + + L+Q +
Sbjct: 65 IETSERQEFLQKLEKVAQLLRATRPTAVNLFWAISRMLKTAYETLGTVAQIKENLLQTAQ 124
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ + IG NG A++ P +KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 125 AINAEDLQTCQVIGDNGL-AILPKTP--TKLTLLTHCNAGALATAGYGTALGVVRS 177
>gi|375099311|ref|ZP_09745574.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
cyanea NA-134]
gi|374660043|gb|EHR59921.1| S-methyl-5-thioribose-1-phosphate isomerase [Saccharomonospora
cyanea NA-134]
Length = 346
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D + ARPTAVN++ + + L A + + +ML++D N+A R
Sbjct: 84 DRIACARPTAVNLRHGVERALALLEHGPDAVLADAL---------AMLDEDERINRAASR 134
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ A L+ P L VLTHCNTG LAT +GTALG +R LH ++ ETRP
Sbjct: 135 HAADLLLRRCPD-RPLRVLTHCNTGRLATVAWGTALGTVRHLHADGRLDVVLADETRPLL 193
Query: 285 QGAR 288
QG+R
Sbjct: 194 QGSR 197
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 43/189 (22%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------- 47
L++I ++ ++ I+DQ LP + + ++ V+ +AI+ + VR
Sbjct: 5 LRTIDWDTDAVVIIDQTALPGRLRTLRLDTVDALVEAIRRLAVRGAPALGAAGALGVALT 64
Query: 48 -------GAPAIAIV-------GCL-GLVVDIKD---------KQFPDNELIQLIESMLE 83
A A+A V C V+++ + PD L + +ML+
Sbjct: 65 AREHGTASAEALATVRAEADRIACARPTAVNLRHGVERALALLEHGPDAVLADAL-AMLD 123
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI- 142
+D N+A R+ A L+ P L VLTHCNTG LAT +GTALG +R LH ++
Sbjct: 124 EDERINRAASRHAADLLLRRCPD-RPLRVLTHCNTGRLATVAWGTALGTVRHLHADGRLD 182
Query: 143 VDIKDKQFP 151
V + D+ P
Sbjct: 183 VVLADETRP 191
>gi|303231435|ref|ZP_07318166.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
ACS-049-V-Sch6]
gi|302513872|gb|EFL55883.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
ACS-049-V-Sch6]
Length = 352
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
P ++ L + E + L RPTA+N+ A + + + + KA P ++ + ++
Sbjct: 70 PFSEQLSTFY-EWSEELKETRPTAINLAWAVNRIIAIV----KAGPFASMHEIIDRITHE 124
Query: 211 ML---EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+ E+D+ N + NGA L G L +LTHCN G+LAT GTALGVIR LH
Sbjct: 125 AIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCNAGALATGGLGTALGVIRKLH 180
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGAR
Sbjct: 181 EQGQLAMVYADETRPLLQGAR 201
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 54/184 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+ +I + +L +L+Q LP + + + +AIK ++VRGAPAI + GL++
Sbjct: 1 MNNIEWRDGTLILLNQTKLPTHVEYLHCTDWRQVAEAIKMLRVRGAPAIGVAAGYGLILA 60
Query: 63 -----------------------DIKDKQ-------FPDNELIQLIES------------ 80
++K+ + + N +I ++++
Sbjct: 61 AAEANRLAVPFSEQLSTFYEWSEELKETRPTAINLAWAVNRIIAIVKAGPFASMHEIIDR 120
Query: 81 -------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ E+D+ N + NGA L L +LTHCN G+LAT GTALGVI
Sbjct: 121 ITHEAIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCNAGALATGGLGTALGVI 176
Query: 134 RSLH 137
R LH
Sbjct: 177 RKLH 180
>gi|393725530|ref|ZP_10345457.1| methylthioribose-1-phosphate isomerase [Sphingomonas sp. PAMC
26605]
Length = 343
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 69/124 (55%), Gaps = 8/124 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L++ARPTAVN+K A D+V +++ + P +++ ++D++ N+AIG +G
Sbjct: 86 LLAARPTAVNLKWALDTVLATV----RPLPAAERGAAAFARADAICDEDVALNQAIGAHG 141
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
DL NP LNVLTHCN G LAT +YGTA I H A + ETRP
Sbjct: 142 LALFRDLHAKNPD-RALNVLTHCNAGWLATVDYGTATAPIYLAHDAGIPVHVWVDETRPR 200
Query: 284 NQGA 287
NQGA
Sbjct: 201 NQGA 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 76/182 (41%), Gaps = 46/182 (25%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV----DIKDKQFPD 71
ILDQ LP T K V++ + DA AI+ M RGAP I GL + D D D
Sbjct: 22 ILDQRELPWTVKWVELRHAHDAEVAIREMWTRGAPLIGATAAYGLAMALAEDGSDAAL-D 80
Query: 72 NELIQLIES------------------------------------MLEKDISDNKAIGRN 95
QL+ + + ++D++ N+AIG +
Sbjct: 81 RAHAQLLAARPTAVNLKWALDTVLATVRPLPAAERGAAAFARADAICDEDVALNQAIGAH 140
Query: 96 GAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFP 151
G DL NP LNVLTHCN G LAT +YGTA I H A V + D+ P
Sbjct: 141 GLALFRDLHAKNPD-RALNVLTHCNAGWLATVDYGTATAPIYLAHDAGIPVHVWVDETRP 199
Query: 152 DN 153
N
Sbjct: 200 RN 201
>gi|390957430|ref|YP_006421187.1| methylthioribose-1-phosphate isomerase [Terriglobus roseus DSM
18391]
gi|390412348|gb|AFL87852.1| methylthioribose-1-phosphate isomerase [Terriglobus roseus DSM
18391]
Length = 360
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 14/143 (9%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVN--------TVKTRLI 205
D+L K V E L + RPTAVN+ + +++ + + A + P + + +I
Sbjct: 71 DALLKDVDEAAAVLAATRPTAVNLFWGIERIRTLVRKLAASQPADRSDADKLKAITDEVI 130
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
M ++DI+ K +G+ GA DL P K VLTHCN G+LAT YG+ALGVIR+
Sbjct: 131 AEANRMYDEDIAACKTMGQFGA----DLLP--KKGTVLTHCNAGALATCGYGSALGVIRA 184
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
+ ETRP+ QGAR
Sbjct: 185 AVERGHVIDVLADETRPFLQGAR 207
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+E+I M ++DI+ K +G+ GA DL P+ K VLTHCN G+LAT YG+ALG
Sbjct: 127 DEVIAEANRMYDEDIAACKTMGQFGA----DLLPK--KGTVLTHCNAGALATCGYGSALG 180
Query: 132 VIRSLHGANKIVDI 145
VIR+ ++D+
Sbjct: 181 VIRAAVERGHVIDV 194
>gi|147678065|ref|YP_001212280.1| translation initiation factor 2B subunit [Pelotomaculum
thermopropionicum SI]
gi|218526922|sp|A5D1G8.1|MTNA_PELTS RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|146274162|dbj|BAF59911.1| predicted translation initiation factor 2B subunit [Pelotomaculum
thermopropionicum SI]
Length = 364
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 11/124 (8%)
Query: 167 LVSARPTAVNMKRAADSV--KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
L + RPTAVN+ A + + K L+E A + + L++ +++ +DI+ N+ + R
Sbjct: 85 LAATRPTAVNLHWALNRMLRKMRLAEPEDAGLLCDL---LLEEAQAIFREDITGNRRMAR 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G ++L P ++ +LTHCN G+LATA YGTALG++R+ H A + + Y ETRP
Sbjct: 142 YG----LELIPEGAR--ILTHCNAGALATAGYGTALGLVRAAHEAGRRVSVYAGETRPLL 195
Query: 285 QGAR 288
QGAR
Sbjct: 196 QGAR 199
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 19/104 (18%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
L++ +++ +DI+ N+ + R G ++L P ++ +LTHCN G+LATA YGTALG++
Sbjct: 121 LLEEAQAIFREDITGNRRMARYG----LELIPEGAR--ILTHCNAGALATAGYGTALGLV 174
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
R+ H A + V + Y GE L AR TA M
Sbjct: 175 RAAHEAGRRVSV-------------YAGETRPLLQGARLTAWEM 205
>gi|77165756|ref|YP_344281.1| initiation factor 2B alpha/beta/delta [Nitrosococcus oceani ATCC
19707]
gi|254433369|ref|ZP_05046877.1| methylthioribose-1-phosphate isomerase [Nitrosococcus oceani AFC27]
gi|123593722|sp|Q3J8U5.1|MTNA_NITOC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|76884070|gb|ABA58751.1| translation initiation factor 2B subunit I family (IF-2BI)
[Nitrosococcus oceani ATCC 19707]
gi|207089702|gb|EDZ66973.1| methylthioribose-1-phosphate isomerase [Nitrosococcus oceani AFC27]
Length = 348
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 15/125 (12%)
Query: 167 LVSARPTAVNMKRA---ADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L +ARPTA+N+ A ++ L + V+ R I E+DI+ N+ +G
Sbjct: 90 LEAARPTAINLAWALARMQAIIQGLPDHRDPESALLVEARCIH------EEDIAANRRMG 143
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
G LI+ + VLTHCNTGSLAT +GTALGVIR +G +I + ETRP+
Sbjct: 144 ELGT-TLIE-----GSVGVLTHCNTGSLATGGFGTALGVIRHAYGKGRIEKVFADETRPW 197
Query: 284 NQGAR 288
QGAR
Sbjct: 198 LQGAR 202
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 92/222 (41%), Gaps = 65/222 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
++++ + +++LDQ LP I V D QAI M VRGAPAI I G+V+
Sbjct: 8 IRAVAWTGAGVRLLDQRRLPQEEIYWTIACVSDVAQAITKMVVRGAPAIGIAAAYGVVLA 67
Query: 63 ---------------------------------------------DIKDKQFPDNELIQL 77
+ D + P++ L+
Sbjct: 68 ARARFSEAGSGWKQLLEADLCDLEAARPTAINLAWALARMQAIIQGLPDHRDPESALLVE 127
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ E+DI+ N+ +G G LI+ + VLTHCNTGSLAT +GTALGVIR +
Sbjct: 128 ARCIHEEDIAANRRMGELGT-TLIE-----GSVGVLTHCNTGSLATGGFGTALGVIRHAY 181
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
G +I +K F D E +L AR T + R
Sbjct: 182 GKGRI----EKVFAD---------ETRPWLQGARLTTWELLR 210
>gi|303326228|ref|ZP_07356671.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio sp.
3_1_syn3]
gi|345891898|ref|ZP_08842727.1| methylthioribose-1-phosphate isomerase [Desulfovibrio sp.
6_1_46AFAA]
gi|302864144|gb|EFL87075.1| S-methyl-5-thioribose-1-phosphate isomerase [Desulfovibrio sp.
3_1_syn3]
gi|345047811|gb|EGW51669.1| methylthioribose-1-phosphate isomerase [Desulfovibrio sp.
6_1_46AFAA]
Length = 352
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 88/170 (51%), Gaps = 30/170 (17%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA +G AL V R+ D D ++ + L+ + +ARPTAVN++ A +
Sbjct: 55 TAAWGCALAVSRT---------------GDGDGWQERLDAALEAIAAARPTAVNLRWAVE 99
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPGVS 238
+++ + + + + L++L +M ++D++ K +GR GA L D +
Sbjct: 100 RMRAC-----RRAAGDVGRPALLELFLREARTMQDEDVAACKRLGRFGADCLEDGD---- 150
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G+LATA YGTALGVIR+ K ETRP+ QGAR
Sbjct: 151 --TVLTHCNAGALATAGYGTALGVIRAAVEQGKRIRVIADETRPFLQGAR 198
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 76/185 (41%), Gaps = 53/185 (28%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN- 72
L +LDQ LLP ++ A+++M VRGAPAI + G + + D
Sbjct: 14 LHLLDQRLLPGEEADFVCRTPDEVITALQTMVVRGAPAIGVTAAWGCALAVSRTGDGDGW 73
Query: 73 -----------------------------------------ELIQLI----ESMLEKDIS 87
L++L +M ++D++
Sbjct: 74 QERLDAALEAIAAARPTAVNLRWAVERMRACRRAAGDVGRPALLELFLREARTMQDEDVA 133
Query: 88 DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIVDIK 146
K +GR GA L D + VLTHCN G+LATA YGTALGVIR ++ +I I
Sbjct: 134 ACKRLGRFGADCLEDGD------TVLTHCNAGALATAGYGTALGVIRAAVEQGKRIRVIA 187
Query: 147 DKQFP 151
D+ P
Sbjct: 188 DETRP 192
>gi|339626338|ref|YP_004717981.1| translation initiation factor, aIF-2BI family [Sulfobacillus
acidophilus TPY]
gi|379005809|ref|YP_005255260.1| methylthioribose-1-phosphate isomerase [Sulfobacillus acidophilus
DSM 10332]
gi|339284127|gb|AEJ38238.1| translation initiation factor, aIF-2BI family [Sulfobacillus
acidophilus TPY]
gi|361052071|gb|AEW03588.1| methylthioribose-1-phosphate isomerase [Sulfobacillus acidophilus
DSM 10332]
Length = 346
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A D L+ P + V TRL + +++ +++ N + + G
Sbjct: 83 LRHVRPTAVNLSWAIDRALGRLT----PGPADEVVTRLRDMADTLRQEEEERNARMAQLG 138
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
AQ L + + VLTHCNTGSLAT GTALGVIR + ++ + ETRP QG
Sbjct: 139 AQLLPNRDS-----RVLTHCNTGSLATVGVGTALGVIREGYRQGRVAMVWVDETRPLLQG 193
Query: 287 AR 288
+R
Sbjct: 194 SR 195
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 51/180 (28%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK-- 65
++ H ++ILDQ LP + + + D +AI+++ VRGAPAI I G GL ++ +
Sbjct: 6 VFSDH-VEILDQRQLPQAVRYFNAHRASDVVEAIRTLAVRGAPAIGIAGLYGLWLEARYL 64
Query: 66 ---------DKQF------------------------------PDNELI----QLIESML 82
DK P +E++ + +++
Sbjct: 65 AEAGESGFMDKLLVAAQQLRHVRPTAVNLSWAIDRALGRLTPGPADEVVTRLRDMADTLR 124
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
+++ N + + GAQ L + + RV LTHCNTGSLAT GTALGVIR + ++
Sbjct: 125 QEEEERNARMAQLGAQLLPNRDSRV-----LTHCNTGSLATVGVGTALGVIREGYRQGRV 179
>gi|385805182|ref|YP_005841580.1| translation initiation factor 2B subunit I family (IF-2BI)
[Fervidicoccus fontis Kam940]
gi|383795045|gb|AFH42128.1| translation initiation factor 2B subunit I family (IF-2BI)
[Fervidicoccus fontis Kam940]
Length = 364
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 151 PDN-DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIE 209
P+N D + K + + ++ L RPTA N+ A + +K + E SP +K +L+
Sbjct: 87 PNNKDEMMKNIEKAVEILSHTRPTAYNLFWALNIMKKTFYESIDLSP-QEIKEKLLSKAL 145
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+ +DI +N +G G + + D + +LTHCNTGSLATA +GTALGVI++
Sbjct: 146 KIQIEDIKNNLKMGEIGEKLIQDGD------TILTHCNTGSLATAGHGTALGVIKTAWKN 199
Query: 270 NKIGAAYCTETRPYNQGAR 288
K TETRP QGAR
Sbjct: 200 GKKIKVIATETRPLLQGAR 218
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 43/175 (24%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+ I ++ L+ +D LP + V+ +++ +AIK +++RGAPAI + L + +
Sbjct: 22 SIVPIEWKDGKLRWIDVTSLPWEERYVESSDIYRVAEAIKRLEIRGAPAIGVTTALAVAM 81
Query: 63 DIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQAL----------IDLNPR------ 106
+ +E+++ IE +E +S + N AL IDL+P+
Sbjct: 82 VAYNSPNNKDEMMKNIEKAVE-ILSHTRPTAYNLFWALNIMKKTFYESIDLSPQEIKEKL 140
Query: 107 VSKL--------------------------NVLTHCNTGSLATAEYGTALGVIRS 135
+SK +LTHCNTGSLATA +GTALGVI++
Sbjct: 141 LSKALKIQIEDIKNNLKMGEIGEKLIQDGDTILTHCNTGSLATAGHGTALGVIKT 195
>gi|220928716|ref|YP_002505625.1| methylthioribose-1-phosphate isomerase [Clostridium cellulolyticum
H10]
gi|219999044|gb|ACL75645.1| translation initiation factor, aIF-2BI family [Clostridium
cellulolyticum H10]
Length = 364
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 69/124 (55%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+YL S+RPTAVN+ A D + + K VN +K L++ +++ ++DI ++IG
Sbjct: 93 EYLASSRPTAVNLFWALDRMDECVKR-NKEKTVNDIKFDLLKESQNIKQEDIWVCRSIGE 151
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G L L PG + +LTHCN G LAT++YGTAL I H + ETRP
Sbjct: 152 YG---LTLLKPG---MGILTHCNAGQLATSKYGTALAPIYVGHEKGYNLKVFADETRPLL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 49/177 (27%)
Query: 7 IIYEKHS-LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
I+ + HS L ILDQ LLP + + + E+ ++AI ++VRGAPAI I G+ + K
Sbjct: 15 ILDDTHSELIILDQTLLPAETVFLKLKTQEEIWEAIYKLRVRGAPAIGIAAAYGIYLGAK 74
Query: 66 DKQFPD-----NELIQLIESML------------------------EKDISDNK------ 90
+ D +E+I+L E + EK ++D K
Sbjct: 75 ASKATDYDGFYSEIIKLKEYLASSRPTAVNLFWALDRMDECVKRNKEKTVNDIKFDLLKE 134
Query: 91 ---------AIGRN-GAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ R+ G L L P + +LTHCN G LAT++YGTAL I H
Sbjct: 135 SQNIKQEDIWVCRSIGEYGLTLLKP---GMGILTHCNAGQLATSKYGTALAPIYVGH 188
>gi|416998984|ref|ZP_11939653.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella parvula
ACS-068-V-Sch12]
gi|333977137|gb|EGL77996.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella parvula
ACS-068-V-Sch12]
Length = 354
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 165 DYLVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
+ L RPTA+N+ A D V K+++ + S V + T+ +I E+D+S N+
Sbjct: 83 EILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDLITKEAIIIH---EEDVSLNR 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ GA L G + +LTHCN G+LAT GTALGV+R LH ++ Y ET
Sbjct: 140 RMAEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADET 195
Query: 281 RPYNQGAR 288
RP QGAR
Sbjct: 196 RPLLQGAR 203
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 63 --------------------DIKDKQFPD-------------------------NELIQL 77
+I + P +E++ L
Sbjct: 63 EAGRLEAPFSEQLTSLYEFSEILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N+ + GA L + +LTHCN G+LAT GTALGV+
Sbjct: 123 ITKEAIIIHEEDVSLNRRMAEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|269798009|ref|YP_003311909.1| translation initiation factor, aIF-2BI family [Veillonella parvula
DSM 2008]
gi|269094638|gb|ACZ24629.1| translation initiation factor, aIF-2BI family [Veillonella parvula
DSM 2008]
Length = 354
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
L RPTA+N+ A D V K+++ + S V + T+ +I E+D+S N+ +
Sbjct: 85 LKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDLITKEAIIIH---EEDVSLNRRM 141
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GA L G + +LTHCN G+LAT GTALGV+R LH ++ Y ETRP
Sbjct: 142 AEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADETRP 197
Query: 283 YNQGAR 288
QGAR
Sbjct: 198 LLQGAR 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 66 DK---------------QFPD---------------------------------NELIQL 77
+ +F + +E++ L
Sbjct: 63 EAGRLEAPFSEQLTSLYEFSETLKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N+ + GA L + +LTHCN G+LAT GTALGV+
Sbjct: 123 ITKEAIIIHEEDVSLNRRMAEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|294793749|ref|ZP_06758886.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp.
3_1_44]
gi|294455319|gb|EFG23691.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp.
3_1_44]
Length = 354
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 165 DYLVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
+ L RPTA+N+ A D V K+++ + S V + T+ +I E+D+S N
Sbjct: 83 EILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVELITKEAIIIH---EEDVSLN- 138
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
R A+A L G + +LTHCN G+LAT GTALGV+R LH ++ Y ET
Sbjct: 139 ---RRMAEAGFTLFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADET 195
Query: 281 RPYNQGAR 288
RP QGAR
Sbjct: 196 RPLLQGAR 203
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 93/225 (41%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 63 --------------------DIKDKQFPD-------------------------NELIQL 77
+I + P +E+++L
Sbjct: 63 EAGRLEAPFSEQLTSLYEFSEILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVEL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N R A+A L + +LTHCN G+LAT GTALGV+
Sbjct: 123 ITKEAIIIHEEDVSLN----RRMAEAGFTLFEGKKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|20088975|ref|NP_615050.1| translation initiation factor IF-2 [Methanosarcina acetivorans C2A]
gi|74534972|sp|Q8TUJ1.1|MTNA_METAC RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|19913825|gb|AAM03530.1| translation initiation factor 2B, subunit 1 [Methanosarcina
acetivorans C2A]
Length = 348
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S R TAVN+ D V +++S+ A V + +Q + E+DI+ NK IG+ G
Sbjct: 94 LKSTRSTAVNLGWGVDRVLNAISD---AFDVQGARDIALQEARDIAEEDIATNKLIGKYG 150
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANKIGAAYCTETRPYNQ 285
+ L D + +VLTHCN G LA ++GTALGV+RS + +I C ETRP NQ
Sbjct: 151 TKFLKDGD------SVLTHCNAGRLACVDWGTALGVVRSAIEEGKEIKVIAC-ETRPLNQ 203
Query: 286 GAR 288
G+R
Sbjct: 204 GSR 206
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 52/172 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------------- 47
E +S+ ++DQ LLP K+++ + +AIKS+++R
Sbjct: 18 ESNSVVLVDQTLLPQEYKVIECKTLSSLCEAIKSLRIRGAPALGAAGGFGIALAASLSGA 77
Query: 48 ------------GAPAI------------AIVGCLGLVVDIKDKQFPDNELIQLIESMLE 83
A A+ + L + D D Q + +Q + E
Sbjct: 78 KDLESMTRDLKVAAKALKSTRSTAVNLGWGVDRVLNAISDAFDVQGARDIALQEARDIAE 137
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+DI+ NK IG+ G + L D + +VLTHCN G LA ++GTALGV+RS
Sbjct: 138 EDIATNKLIGKYGTKFLKDGD------SVLTHCNAGRLACVDWGTALGVVRS 183
>gi|347523839|ref|YP_004781409.1| translation initiation factor, aIF-2BI family [Pyrolobus fumarii
1A]
gi|343460721|gb|AEM39157.1| translation initiation factor, aIF-2BI family [Pyrolobus fumarii
1A]
Length = 371
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWA-KASPVNTVKTRLIQLIESMLE 213
L K + E + L RPTA N+ A D V A ++S V+ V+ +I+ + ++
Sbjct: 87 ELLKDLEEAANVLRETRPTAYNLFWAIDRVLERARRAASESSSVDDVRNAVIEEAKRIML 146
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI N +G GA+ + D + +LTHCNTG+LATA YGTALGVIR+ K
Sbjct: 147 EDIEANIRMGEIGAKLIQDGD------TILTHCNTGALATAGYGTALGVIRAAVEEGKRI 200
Query: 274 AAYCTETRPYNQGAR 288
TETRP QGAR
Sbjct: 201 RVIATETRPLLQGAR 215
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
N +I+ + ++ +DI N +G GA+ + D + +LTHCNTG+LATA YGTALG
Sbjct: 135 NAVIEEAKRIMLEDIEANIRMGEIGAKLIQDGD------TILTHCNTGALATAGYGTALG 188
Query: 132 VIRS 135
VIR+
Sbjct: 189 VIRA 192
>gi|282850236|ref|ZP_06259615.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella parvula
ATCC 17745]
gi|282579729|gb|EFB85133.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella parvula
ATCC 17745]
Length = 354
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
L RPTA+N+ A D V K+++ + S V + T+ +I E+D+S N+ +
Sbjct: 85 LKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDLITKEAIIIH---EEDVSLNRRM 141
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GA L G + +LTHCN G+LAT GTALGV+R LH ++ Y ETRP
Sbjct: 142 AEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADETRP 197
Query: 283 YNQGAR 288
QGAR
Sbjct: 198 LLQGAR 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLVLLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 66 DK---------------QFPD---------------------------------NELIQL 77
+ +F + +E++ L
Sbjct: 63 EAGRLEAPFSEQLTNLYEFSETLKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N+ + GA L + +LTHCN G+LAT GTALGV+
Sbjct: 123 ITKEAIIIHEEDVSLNRRMAEAGAT----LFEGKKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|429216980|ref|YP_007174970.1| S-methyl-5-thioribose-1-phosphate isomerase [Caldisphaera
lagunensis DSM 15908]
gi|429133509|gb|AFZ70521.1| S-methyl-5-thioribose-1-phosphate isomerase [Caldisphaera
lagunensis DSM 15908]
Length = 365
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 19/166 (11%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL I S A+K+ D L K V E + L S RPTA N+ A +
Sbjct: 70 SAAYGLALATIYS--NASKV-----------DDLLKDVKEAYNVLASTRPTAYNLFWALN 116
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+ + + + + + +K ++ + +DI +N +G+ G++ +I+ N +
Sbjct: 117 RLWNVILSNYEKNDLEDIKQNVLNEAHRVYIEDIKNNVNMGKYGSK-IIENNS-----RI 170
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+THCNTG+LATA +GTALGVIR K Y ETRP QGAR
Sbjct: 171 ITHCNTGALATAGFGTALGVIRYAFYEGKSIHVYADETRPLLQGAR 216
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 93/229 (40%), Gaps = 70/229 (30%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------ 62
++K +D L+P + QAIK M++RGAPAI + GL +
Sbjct: 24 FDKGEFVWIDTRLIPWKELYRSTKDYHRVAQAIKEMEIRGAPAIGVSAAYGLALATIYSN 83
Query: 63 ---------DIKDKQ--------------FPDNELIQLIESMLEK--------------- 84
D+K+ + N L +I S EK
Sbjct: 84 ASKVDDLLKDVKEAYNVLASTRPTAYNLFWALNRLWNVILSNYEKNDLEDIKQNVLNEAH 143
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
DI +N +G+ G++ +I+ N R+ +THCNTG+LATA +GTALGVIR
Sbjct: 144 RVYIEDIKNNVNMGKYGSK-IIENNSRI-----ITHCNTGALATAGFGTALGVIRY---- 193
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
F + S+ Y E L AR T +K+ + + S+L
Sbjct: 194 ---------AFYEGKSIHVYADETRPLLQGARLTIWELKK--EGIPSTL 231
>gi|83591700|ref|YP_425452.1| methylthioribose-1-phosphate isomerase [Rhodospirillum rubrum ATCC
11170]
gi|386348386|ref|YP_006046634.1| methylthioribose-1-phosphate isomerase [Rhodospirillum rubrum F11]
gi|83574614|gb|ABC21165.1| translation initiation factor 2B subunit I family (IF-2BI)
[Rhodospirillum rubrum ATCC 11170]
gi|346716822|gb|AEO46837.1| methylthioribose-1-phosphate isomerase [Rhodospirillum rubrum F11]
Length = 390
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 30/173 (17%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG ALG+ + P ++ L + L++ RPTAVN++ A
Sbjct: 60 ATAAYGVALGM---------------AEDPSDEGLTR----ACQTLLATRPTAVNLRWAI 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL--NPGVSK 239
+++ SL+ A P + ++ ++D++ N+AIG +G + DL GV K
Sbjct: 101 EAMAESLA----AVPPDQRAQAAWAKAGAICDEDVALNEAIGDHGLGIIKDLARTKGVEK 156
Query: 240 -----LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCN G LAT ++GTAL + H A + ETRP NQGA
Sbjct: 157 GGEGPINILTHCNAGWLATVDWGTALAPLYKAHDAGLPIHVWVDETRPRNQGA 209
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 51/193 (26%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
E ++ I+DQ LPH +N++ AI++M VRGAP I G+ + + +
Sbjct: 16 EGGAVWIIDQTRLPHEFVTQRLNDLGAVAHAIRAMLVRGAPLIGATAAYGVALGMAED-- 73
Query: 70 PDNE------------------LIQLIESMLE-----------------------KDISD 88
P +E L IE+M E +D++
Sbjct: 74 PSDEGLTRACQTLLATRPTAVNLRWAIEAMAESLAAVPPDQRAQAAWAKAGAICDEDVAL 133
Query: 89 NKAIGRNGAQALIDL--NPRVSK-----LNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
N+AIG +G + DL V K +N+LTHCN G LAT ++GTAL + H A
Sbjct: 134 NEAIGDHGLGIIKDLARTKGVEKGGEGPINILTHCNAGWLATVDWGTALAPLYKAHDAGL 193
Query: 142 IVDIK-DKQFPDN 153
+ + D+ P N
Sbjct: 194 PIHVWVDETRPRN 206
>gi|283779754|ref|YP_003370509.1| translation initiation factor, aIF-2BI family [Pirellula staleyi
DSM 6068]
gi|283438207|gb|ADB16649.1| translation initiation factor, aIF-2BI family [Pirellula staleyi
DSM 6068]
Length = 357
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
++ ++D D+ + E +L S+RPTAVN+ A D ++ ++ A +
Sbjct: 65 VLGLQDVAMKDSAEFMARLDELHAFLASSRPTAVNLFWALDRMRRRATQLASQPSGKVIH 124
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
L++ ++ ++D +AIG++G+ LI G+ LTHCN G LATAEYGTAL
Sbjct: 125 LALLEEARAIHDEDRQLCRAIGKHGS-PLIAAGSGI-----LTHCNAGGLATAEYGTALS 178
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
++ + K + ETRP QGAR
Sbjct: 179 IMFTCQDEGKPIHVFVDETRPLLQGAR 205
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 60/224 (26%)
Query: 1 MKS-LQSIIYEKH---SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG 56
MKS L++I ++ +L ++DQ LLP K +D ++VE ++AIK ++VRGAPAI I
Sbjct: 1 MKSPLETIRWQGEASGTLTLIDQTLLPLEIKELDCHDVESVWEAIKQLRVRGAPAIGIAA 60
Query: 57 CLGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL------ 110
GLV+ ++D D+ L ++ ++ N AL + R ++L
Sbjct: 61 AYGLVLGLQDVAMKDSAEFMARLDELHAFLASSRPTAVNLFWALDRMRRRATQLASQPSG 120
Query: 111 -------------------------------------NVLTHCNTGSLATAEYGTALGVI 133
+LTHCN G LATAEYGTAL ++
Sbjct: 121 KVIHLALLEEARAIHDEDRQLCRAIGKHGSPLIAAGSGILTHCNAGGLATAEYGTALSIM 180
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
+ K + + +V E L AR TA +
Sbjct: 181 FTCQDEGKPIHV-------------FVDETRPLLQGARLTAFEL 211
>gi|424794428|ref|ZP_18220396.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas
translucens pv. graminis ART-Xtg29]
gi|422795947|gb|EKU24548.1| S-methyl-5-thioribose-1-phosphate isomerase [Xanthomonas
translucens pv. graminis ART-Xtg29]
Length = 354
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 11/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTAVN+ A ++++L+ + + + + +++ E+D++ N+ +G
Sbjct: 94 LQRLNAARPTAVNLAWALMRMRNTLA-----AAGADWRAAIARQAQAIAEEDLAANRHMG 148
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA ALI PG VLTHCNTGSLATA +GTALGVIR+ +I + ETRP+
Sbjct: 149 ALGA-ALI--APGS---GVLTHCNTGSLATAGFGTALGVIRAGMAQGRIAKVFAGETRPW 202
Query: 284 NQGAR 288
QGAR
Sbjct: 203 LQGAR 207
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + + + + AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGEALELLDQRKLPFVVEHLQCTDSDQVADAIHTLAVRGAPAIGIAAGWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESML---------------------------------------- 82
+ Q D + + +E L
Sbjct: 75 ARAVQADDGAQALARLEPALQRLNAARPTAVNLAWALMRMRNTLAAAGADWRAAIARQAQ 134
Query: 83 ---EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
E+D++ N+ +G GA ALI VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-ALI-----APGSGVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
+I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 GRIAKV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAAAHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|16331195|ref|NP_441923.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803]
gi|383322938|ref|YP_005383791.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326107|ref|YP_005386960.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491991|ref|YP_005409667.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437259|ref|YP_005651983.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803]
gi|451815351|ref|YP_007451803.1| hypothetical protein MYO_120490 [Synechocystis sp. PCC 6803]
gi|3183456|sp|P74497.1|MTNA_SYNY3 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|1653689|dbj|BAA18601.1| slr1938 [Synechocystis sp. PCC 6803]
gi|339274291|dbj|BAK50778.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803]
gi|359272257|dbj|BAL29776.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275427|dbj|BAL32945.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278597|dbj|BAL36114.1| methylthioribose-1-phosphate isomerase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961428|dbj|BAM54668.1| methylthioribose-1-phosphate isomerase [Bacillus subtilis BEST7613]
gi|451781320|gb|AGF52289.1| hypothetical protein MYO_120490 [Synechocystis sp. PCC 6803]
Length = 351
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L RPTAVN+ A D + + + V +K L+ + + D+ +AIG
Sbjct: 90 DQLRQTRPTAVNLFWAIDQMLNV--AYHSGENVEQIKANLLSQAQQIQLDDLRTCQAIGA 147
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
G + L P +L +LTHCN G+LATA YGTA+GVIR+ A ++ Y ETRP
Sbjct: 148 AGLEVL-PREP--HQLTILTHCNAGALATAGYGTAIGVIRAAWSAGRLARVYADETRPRL 204
Query: 285 QGAR 288
QGA+
Sbjct: 205 QGAK 208
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 79/185 (42%), Gaps = 52/185 (28%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
+ + ++DQ LP K V I + E AIKSM VRGAPAI + G+ + + Q
Sbjct: 15 WRDDQVILIDQTRLPLEYKEVAIADYEAMGHAIKSMVVRGAPAIGVAAAYGMYLGARRIQ 74
Query: 69 ------------FPDNELIQL----------IESMLE----------------------- 83
F ++L Q I+ ML
Sbjct: 75 TTELREFVVQLEFVADQLRQTRPTAVNLFWAIDQMLNVAYHSGENVEQIKANLLSQAQQI 134
Query: 84 --KDISDNKAIGRNGAQALIDLNPR-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
D+ +AIG G + L PR +L +LTHCN G+LATA YGTA+GVIR+ A
Sbjct: 135 QLDDLRTCQAIGAAGLEVL----PREPHQLTILTHCNAGALATAGYGTAIGVIRAAWSAG 190
Query: 141 KIVDI 145
++ +
Sbjct: 191 RLARV 195
>gi|434382730|ref|YP_006704513.1| translation initiation factor, aIF-2BI family [Brachyspira
pilosicoli WesB]
gi|404431379|emb|CCG57425.1| translation initiation factor, aIF-2BI family [Brachyspira
pilosicoli WesB]
Length = 348
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 54/185 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +I + L ILDQ LLP T K + ++++ED+Y AIK ++VRGAPAI + L
Sbjct: 1 MPNIPTIRWSNDELYILDQTLLPVTVKEIKLSSIEDSYNAIKELKVRGAPAIGVAAAYSL 60
Query: 61 VVDI-KDKQFPDNELIQLIE---------------------------------------S 80
++D+ K+ + ++ I L+E +
Sbjct: 61 LIDLKKETKLSSDDFISLVEKRAKYLNSSRPTAVNLSYALNRMFNAINNKKDKTSLELYN 120
Query: 81 MLE--------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
MLE +DI+ + IG GA+ L D +LTHCN G LA + GTAL
Sbjct: 121 MLENEAKNIHSEDIAICQKIGEYGAELLKD------NTGILTHCNAGRLAVSGIGTALAP 174
Query: 133 IRSLH 137
+ + H
Sbjct: 175 MYTAH 179
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
++D+K + +D V ++ YL S+RPTAVN+ A + + ++ +N K
Sbjct: 61 LIDLKKETKLSSDDFISLVEKRAKYLNSSRPTAVNLSYALNRMFNA---------INNKK 111
Query: 202 TRLIQLIESMLE--------KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLAT 253
+ + +MLE +DI+ + IG GA+ L D N G+ LTHCN G LA
Sbjct: 112 DKTSLELYNMLENEAKNIHSEDIAICQKIGEYGAELLKD-NTGI-----LTHCNAGRLAV 165
Query: 254 AEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ GTAL + + H Y ETRP QGAR
Sbjct: 166 SGIGTALAPMYTAHKNGVKIRVYADETRPLLQGAR 200
>gi|288561024|ref|YP_003424510.1| translation initiation factor aIF-2B alpha subunit
[Methanobrevibacter ruminantium M1]
gi|288543734|gb|ADC47618.1| translation initiation factor aIF-2B alpha subunit
[Methanobrevibacter ruminantium M1]
Length = 319
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 32/164 (19%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
++++ +E + LK++DQ LP V +N + AIK M VRGAPAI + G+
Sbjct: 1 MRTLEWEDNKLKLIDQTKLPDELTYVYCSNYKQVITAIKDMIVRGAPAIGVSAAFGMALA 60
Query: 62 -----------VDIKDKQFPDNELIQLI------ESMLEK-------DISDNKAIGRNGA 97
V++K+ + L+ + E+ML++ DI+ N AIG GA
Sbjct: 61 QLAGEDMEKVAVEMKNARPTAVNLMWAVDRVMKAENMLDEALEMAREDINTNLAIGEYGA 120
Query: 98 QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+ + D + VLTHCN G+LA +YGTALGV RS K
Sbjct: 121 ELIDDGD------TVLTHCNAGALACVDYGTALGVFRSAFNQGK 158
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 24/137 (17%)
Query: 155 SLEKYVGEKLDYLV----SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
+L + GE ++ + +ARPTAVN+ A D V + + L + +E
Sbjct: 58 ALAQLAGEDMEKVAVEMKNARPTAVNLMWAVDRVMKA-------------ENMLDEALE- 103
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
M +DI+ N AIG GA+ + D + VLTHCN G+LA +YGTALGV RS
Sbjct: 104 MAREDINTNLAIGEYGAELIDDGD------TVLTHCNAGALACVDYGTALGVFRSAFNQG 157
Query: 271 KIGAAYCTETRPYNQGA 287
K C ETRP QGA
Sbjct: 158 KNIQVICDETRPRGQGA 174
>gi|429759469|ref|ZP_19291968.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
KON]
gi|429179745|gb|EKY20984.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
KON]
Length = 357
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
P ++ L + E + L RPTA+N+ A + + + + KA P ++ + ++
Sbjct: 75 PFSEQLSTFY-EWSEELKETRPTAINLAWAVNRIIAIV----KAGPFASMHEIIDRITHE 129
Query: 211 ML---EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+ E+D+ N + NGA L G L +LTHCN G+LAT GTALGVIR LH
Sbjct: 130 AIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCNAGALATGGLGTALGVIRKLH 185
Query: 268 GANKIGAAYCTETRPYNQGAR 288
++ Y ETRP QGAR
Sbjct: 186 EQGQLEMVYADETRPLLQGAR 206
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 54/184 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+ +I + +L +LDQ LP + + + +AIK ++VRGAPAI + GL++
Sbjct: 6 MNNIEWRDGTLILLDQTKLPTHVEYLQCTDWRQVAEAIKMLRVRGAPAIGVAAGYGLILA 65
Query: 63 -----------------------DIKDKQ-------FPDNELIQLIES------------ 80
++K+ + + N +I ++++
Sbjct: 66 AVEANRLAVPFSEQLSTFYEWSEELKETRPTAINLAWAVNRIIAIVKAGPFASMHEIIDR 125
Query: 81 -------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ E+D+ N + NGA L L +LTHCN G+LAT GTALGVI
Sbjct: 126 ITHEAIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCNAGALATGGLGTALGVI 181
Query: 134 RSLH 137
R LH
Sbjct: 182 RKLH 185
>gi|407461655|ref|YP_006772972.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045277|gb|AFS80030.1| aIF-2BI family translation initiation factor [Candidatus
Nitrosopumilus koreensis AR1]
Length = 348
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 167 LVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
L RPTAVN+ + + KS S V ++ ++I + M ++DI NK +
Sbjct: 90 LFETRPTAVNLAWGLEKIMIVAKSRDS-------VEQIREQVISEAKKMADEDIEINKTM 142
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
G+NG+ L D N ++THCN G+LAT YGTALGVIR+ + K TETRP
Sbjct: 143 GKNGS-ILFDDND-----TIMTHCNAGALATVAYGTALGVIRATKESGKNVKVIATETRP 196
Query: 283 YNQGAR 288
QG+R
Sbjct: 197 IQQGSR 202
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 52/189 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
SL+++ ++ + + ++DQ LP+ V+ ++ AI+++ VRGAPAI + G GL +
Sbjct: 7 SLRTVDWKNNKVVMIDQTKLPNELVFVEFDDYNQVADAIRTLVVRGAPAIGVSGAFGLAL 66
Query: 63 DI-------KDKQFPD---------------------------------------NELIQ 76
+ KD+ D ++I
Sbjct: 67 AVLQSNATTKDELISDLENAKKILFETRPTAVNLAWGLEKIMIVAKSRDSVEQIREQVIS 126
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ M ++DI NK +G+NG+ L D N ++THCN G+LAT YGTALGVIR+
Sbjct: 127 EAKKMADEDIEINKTMGKNGS-ILFDDND-----TIMTHCNAGALATVAYGTALGVIRAT 180
Query: 137 HGANKIVDI 145
+ K V +
Sbjct: 181 KESGKNVKV 189
>gi|282901671|ref|ZP_06309587.1| Putative translation initiation factor, aIF-2BI [Cylindrospermopsis
raciborskii CS-505]
gi|281193434|gb|EFA68415.1| Putative translation initiation factor, aIF-2BI [Cylindrospermopsis
raciborskii CS-505]
Length = 341
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + E + +K L+Q E + +D+ + IG NG
Sbjct: 84 LRSTRPTAVNLFWAIGRMMQIAYE--TLGTIEEIKQNLLQTAEKIRTEDLETCQLIGDNG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 142 LKVLPKTP---EKLIILTHCNAGALATAGYGTALGVVRSAWKEGRLTRVFADETRPRLQG 198
Query: 287 AR 288
A+
Sbjct: 199 AK 200
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 52/180 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I++ S+ ++DQ LP+ +++++ +D +AI++M VRGAPAI + G+ +
Sbjct: 2 LYPVIWKNDSVILIDQTRLPNEYAVIEVHRSQDMAEAIRTMIVRGAPAIGVAAAYGMYLG 61
Query: 64 IKD------KQF---------------P--------------------------DNELIQ 76
++ ++F P L+Q
Sbjct: 62 AREIKTNNRQEFLHELEGVAQLLRSTRPTAVNLFWAIGRMMQIAYETLGTIEEIKQNLLQ 121
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
E + +D+ + IG NG + L P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 122 TAEKIRTEDLETCQLIGDNGLKVL----PKTPEKLIILTHCNAGALATAGYGTALGVVRS 177
>gi|256828006|ref|YP_003156734.1| translation initiation factor, aIF-2BI family [Desulfomicrobium
baculatum DSM 4028]
gi|256577182|gb|ACU88318.1| translation initiation factor, aIF-2BI family [Desulfomicrobium
baculatum DSM 4028]
Length = 348
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L ARPTAVN+ A ++ + + + V + L I + +DI+ NKA+G
Sbjct: 82 LSMLAQARPTAVNLAWAVGVMREAGAGIQDPRELGEVWSALAMKIHA---EDIAMNKAMG 138
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
R G L D + V+THCN G+LATA YGTALGVIR K + ETRP+
Sbjct: 139 RFGGALLDDGD------TVMTHCNAGALATAGYGTALGVIRGAVDMGKKISVIANETRPF 192
Query: 284 NQGAR 288
QGAR
Sbjct: 193 LQGAR 197
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 74/168 (44%), Gaps = 53/168 (31%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ---- 68
+L +LDQ LP + VED A+++M VRGAPAI + G + +K
Sbjct: 13 ALLLLDQRKLPLVEETYPCRTVEDVIYALQTMVVRGAPAIGVSAAYGCRIALKQAMAAGA 72
Query: 69 FPDNELIQLIESMLEK------------------------------------------DI 86
+ NEL +L+ SML + DI
Sbjct: 73 YWRNELERLL-SMLAQARPTAVNLAWAVGVMREAGAGIQDPRELGEVWSALAMKIHAEDI 131
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+ NKA+GR G L D + V+THCN G+LATA YGTALGVIR
Sbjct: 132 AMNKAMGRFGGALLDDGD------TVMTHCNAGALATAGYGTALGVIR 173
>gi|228950347|ref|ZP_04112515.1| Translation initiation factor, aIF-2BI [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228809327|gb|EEM55780.1| Translation initiation factor, aIF-2BI [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 345
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
DYL +ARPTAVN+ A + +K + + K + + ++ L + + ++DI NK+IG
Sbjct: 83 DYLETARPTAVNLTWAVNEMKKVIFSY-KGNSIKELRELLEKEAIKIHQEDIMINKSIGE 141
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ L D N VLTHCN G+LAT+EYGTAL V AY ETRP
Sbjct: 142 SLLSLLKDNN------TVLTHCNAGALATSEYGTALSVFYVAKEKGMNIKAYADETRPRQ 195
Query: 285 QGAR 288
QGA+
Sbjct: 196 QGAK 199
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 54/179 (30%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV- 61
+L+++ ++ ++L ++DQ LP+ + V++ +ED + +I+ M VRGAPAI + G+V
Sbjct: 2 NLKTLEWKDNTLILIDQTKLPNKVEFVEVKTLEDTFVSIRDMIVRGAPAIGVASAYGVVL 61
Query: 62 --VDIKDKQF------------------PD--------NELIQLIES-----------ML 82
++I + F P NE+ ++I S +L
Sbjct: 62 SAININEVSFNVFKEILLKECDYLETARPTAVNLTWAVNEMKKVIFSYKGNSIKELRELL 121
Query: 83 EK--------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
EK DI NK+IG + L D N VLTHCN G+LAT+EYGTAL V
Sbjct: 122 EKEAIKIHQEDIMINKSIGESLLSLLKDNN------TVLTHCNAGALATSEYGTALSVF 174
>gi|390951579|ref|YP_006415338.1| S-methyl-5-thioribose-1-phosphate isomerase [Thiocystis violascens
DSM 198]
gi|390428148|gb|AFL75213.1| S-methyl-5-thioribose-1-phosphate isomerase [Thiocystis violascens
DSM 198]
Length = 357
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 10/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L ++RPTAVN+ A +++ + P L++ ++ E+D + N +G
Sbjct: 91 LERLAASRPTAVNLFWAIRRMRALIERLDTTDPTPA----LLREALAIHEEDRAANHRMG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA+ LI+ +++THCN G++AT YGTALGV+RS A KI Y ETRP+
Sbjct: 147 DLGAE-LIE-----GPTDIVTHCNAGAIATGGYGTALGVVRSAFAAGKIRRVYADETRPW 200
Query: 284 NQGAR 288
QGAR
Sbjct: 201 MQGAR 205
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 51/180 (28%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV----- 62
++ + L + DQ +LP ++ + + +AI++M VRGAPAI + G+V+
Sbjct: 16 LWYEDRLYLADQRVLPERAEFLSYQQAPEVAEAIRAMVVRGAPAIGVTAAYGVVLAGRAA 75
Query: 63 --------------DIK--------------------------DKQFPDNELIQLIESML 82
D++ D P L++ ++
Sbjct: 76 HATAGVGWKTAIEADLERLAASRPTAVNLFWAIRRMRALIERLDTTDPTPALLREALAIH 135
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E+D + N +G GA+ LI+ +++THCN G++AT YGTALGV+RS A KI
Sbjct: 136 EEDRAANHRMGDLGAE-LIE-----GPTDIVTHCNAGAIATGGYGTALGVVRSAFAAGKI 189
>gi|342218360|ref|ZP_08710974.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera sp. UPII
135-E]
gi|341589772|gb|EGS33034.1| S-methyl-5-thioribose-1-phosphate isomerase [Megasphaera sp. UPII
135-E]
Length = 357
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ LD ARPTAVN+ A + + V+ + L QL + ++D+ N
Sbjct: 84 IGKTLD---RARPTAVNLHWAIMRMLDCAVR-QQDHTVDDIIKELEQLAIQIHQEDVLLN 139
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
K + G Q L + L +LTHCN G+LATA GTALGVIR LH I Y E
Sbjct: 140 KQLSMVGTQELSKIG---KPLTILTHCNAGALATAAIGTALGVIRGLHQKGFIHMVYADE 196
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 197 TRPLLQGAR 205
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 53 AIVGCLGLVVDIKDKQFPD--NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL 110
AI+ L V +D D EL QL + ++D+ NK + G Q L + L
Sbjct: 101 AIMRMLDCAVRQQDHTVDDIIKELEQLAIQIHQEDVLLNKQLSMVGTQELSKIG---KPL 157
Query: 111 NVLTHCNTGSLATAEYGTALGVIRSLH 137
+LTHCN G+LATA GTALGVIR LH
Sbjct: 158 TILTHCNAGALATAAIGTALGVIRGLH 184
>gi|408821525|ref|ZP_11206415.1| methylthioribose-1-phosphate isomerase [Pseudomonas geniculata N1]
Length = 354
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 19/147 (12%)
Query: 146 KDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL----SEWAKASPVNTVK 201
+D Q D + + L L ++RPTAVN+ A ++ L ++W K
Sbjct: 76 RDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADW---------K 126
Query: 202 TRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALG 261
L +++ E+D++ N+ +G GA LI+ GV LTHCNTGSLATA +GTALG
Sbjct: 127 AALEAEAQAIAEEDLAANRHMGALGA-GLIEAGSGV-----LTHCNTGSLATAGFGTALG 180
Query: 262 VIRSLHGANKIGAAYCTETRPYNQGAR 288
VIR+ ++I + ETRP+ QGAR
Sbjct: 181 VIRAGMAQHRIARVFAGETRPWLQGAR 207
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 112/249 (44%), Gaps = 67/249 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I++ +L++LDQ LP + V ++ ++ AI ++ VRGAPAI I G+V+
Sbjct: 15 IRPILWTGDALQLLDQRKLPFVVEHVVCHDSDEVAAAIHALTVRGAPAIGIAAAWGVVLA 74
Query: 64 IKDKQFPDN-ELIQLIESMLEK-------------------------------------- 84
+D Q D +Q +E L++
Sbjct: 75 ARDVQAADGAHALQQLEPALQRLNASRPTAVNLAWALARMRRCLNAAGADWKAALEAEAQ 134
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 139
D++ N+ +G GA LI+ VLTHCNTGSLATA +GTALGVIR+
Sbjct: 135 AIAEEDLAANRHMGALGA-GLIEAGS-----GVLTHCNTGSLATAGFGTALGVIRAGMAQ 188
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNT 199
++I + + GE +L AR T +++ D + ++L A ++ +
Sbjct: 189 HRIARV-------------FAGETRPWLQGARLTVWELQQ--DGIDATLI--ADSAASHL 231
Query: 200 VKTRLIQLI 208
+KT +Q +
Sbjct: 232 MKTGAVQWV 240
>gi|384261853|ref|YP_005417039.1| Translation initiation factor 2B subunit I family (IF-2BI)
[Rhodospirillum photometricum DSM 122]
gi|378402953|emb|CCG08069.1| Translation initiation factor 2B subunit I family (IF-2BI)
[Rhodospirillum photometricum DSM 122]
Length = 361
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES--MLEKDISDNKAIGR 224
LV+ RPTA+N++ A D++K+ L+ P++ + + + ++D++ N+AIG
Sbjct: 86 LVATRPTAINLRWALDTMKARLA------PLSPAERPAAARAHAAAICDEDVALNEAIGS 139
Query: 225 NGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
NG + + L G N+LTHCN G LAT ++GTAL I H A + ETR
Sbjct: 140 NGLEVIRSLYATKGGTGTFNILTHCNAGWLATVDWGTALAPIYKAHDAGLPIHVWVDETR 199
Query: 282 PYNQGA 287
P NQGA
Sbjct: 200 PRNQGA 205
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 43/187 (22%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV----DIK 65
+ ++ I+DQ LPH + + + ++E A AI +M VRGAP I G+ + D
Sbjct: 16 DGRAVGIIDQTRLPHAFETLRLTSMEAAAHAISAMLVRGAPLIGATAAWGVALAMAEDAS 75
Query: 66 DKQFPDN------------ELIQLIESM-----------------------LEKDISDNK 90
D L +++M ++D++ N+
Sbjct: 76 DTGLERAYAVLVATRPTAINLRWALDTMKARLAPLSPAERPAAARAHAAAICDEDVALNE 135
Query: 91 AIGRNGAQALIDLNPR---VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK- 146
AIG NG + + L N+LTHCN G LAT ++GTAL I H A + +
Sbjct: 136 AIGSNGLEVIRSLYATKGGTGTFNILTHCNAGWLATVDWGTALAPIYKAHDAGLPIHVWV 195
Query: 147 DKQFPDN 153
D+ P N
Sbjct: 196 DETRPRN 202
>gi|309791826|ref|ZP_07686313.1| aIF-2BI family translation initiation factor [Oscillochloris
trichoides DG-6]
gi|308226148|gb|EFO79889.1| aIF-2BI family translation initiation factor [Oscillochloris
trichoides DG6]
Length = 351
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 97/233 (41%), Gaps = 69/233 (29%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG-- 59
+ L+++ +E ++ ++DQLLLPH +V E AIKSMQVRGAPAI G
Sbjct: 3 EELRTVWWEADAVCLIDQLLLPHEQVVVRCTTPELVAHAIKSMQVRGAPAIGCTAAYGMA 62
Query: 60 -------------LVVDIK------DKQFPD----------------------------- 71
L+ D++ D Q P
Sbjct: 63 LIALQSQAETVPALLADLEAGKVMLDSQRPTAVNLAWATDRLLTKARQLSAEVATPQALA 122
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
L+ ++L +D++ AIG +GA LI R VLTHCN G LATA YGTAL
Sbjct: 123 AALLDEGHAVLNEDLAMCHAIGDHGAP-LIPAGGR-----VLTHCNAGGLATAGYGTALA 176
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV 184
+R+ F ++ +V E +L AR TA + +A S+
Sbjct: 177 PMRT-------------AFAQGRNIHVWVDETRPFLQGARLTAWELHQAGISL 216
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 169 SARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGA 227
S RPTAVN+ A D + + + A+ + + L+ ++L +D++ AIG +GA
Sbjct: 89 SQRPTAVNLAWATDRLLTKARQLSAEVATPQALAAALLDEGHAVLNEDLAMCHAIGDHGA 148
Query: 228 QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
L P + VLTHCN G LATA YGTAL +R+ + + ETRP+ QGA
Sbjct: 149 ----PLIPAGGR--VLTHCNAGGLATAGYGTALAPMRTAFAQGRNIHVWVDETRPFLQGA 202
Query: 288 R 288
R
Sbjct: 203 R 203
>gi|419718073|ref|ZP_14245411.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnoanaerobaculum
saburreum F0468]
gi|383305767|gb|EIC97114.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnoanaerobaculum
saburreum F0468]
Length = 363
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV +L A ++ + D + +++G K DY S+RPTAVN+ A + ++ +L
Sbjct: 58 AIGVCAALGIAKTASQVQADNYADFE--REFLGLK-DYFASSRPTAVNLFWALNRMEDTL 114
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
K ++ +K L + +++ +DI+ ++ IG G + L L ++ ++THCN
Sbjct: 115 KS-HKEKDIDEIKEILFKEADNIRNEDIAISRGIGELGFKLLKKLKRNGKEIGIMTHCNA 173
Query: 249 GSLATAEYGTALGVIRSLHGANKIGA---AYCTETRPYNQGAR 288
G+LATA+YGTA + +G+ YC ETRP QGAR
Sbjct: 174 GTLATAKYGTATAPMYMALENGFLGSDMHVYCDETRPLLQGAR 216
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 48/168 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---VVDIKD 66
E +L I+DQ LLP K +++N E+ ++AIK ++VRGAPAI + LG+ ++
Sbjct: 17 EDGNLNIIDQTLLPGEIKRINLNTKEEIWEAIKKLRVRGAPAIGVCAALGIAKTASQVQA 76
Query: 67 KQFPD--------------------------NELIQLIESMLEKDI----------SDN- 89
+ D N + ++S EKDI +DN
Sbjct: 77 DNYADFEREFLGLKDYFASSRPTAVNLFWALNRMEDTLKSHKEKDIDEIKEILFKEADNI 136
Query: 90 --------KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
+ IG G + L L ++ ++THCN G+LATA+YGTA
Sbjct: 137 RNEDIAISRGIGELGFKLLKKLKRNGKEIGIMTHCNAGTLATAKYGTA 184
>gi|304314210|ref|YP_003849357.1| translation initiation factor aIF-2B, subunit alpha
[Methanothermobacter marburgensis str. Marburg]
gi|302587669|gb|ADL58044.1| translation initiation factor aIF-2B, subunit alpha
[Methanothermobacter marburgensis str. Marburg]
Length = 309
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 20/120 (16%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
S+RPTAVN+ A D V S SP++ + +D+ N+AIG +GA
Sbjct: 76 SSRPTAVNLFWAVDRVMKS------GSPLDEAL--------KIYREDMETNRAIGAHGAS 121
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ D + +LTHCN G+LA +YGTALGV+R+ K C ETRP QGAR
Sbjct: 122 IIHDGD------TILTHCNAGALACVDYGTALGVVRAARDQGKNITVICDETRPVGQGAR 175
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 36/178 (20%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK+L+ ++ + L ++DQ LP + + N D AIK+M VRGAPAI + G+
Sbjct: 1 MKTLE---WKDNRLILIDQRKLPDSLEYFQCENYRDVIYAIKNMVVRGAPAIGVTAAFGV 57
Query: 61 VV-------------DIKDKQFPDNELIQLIESMLE-------------KDISDNKAIGR 94
+ +I+ + L ++ +++ +D+ N+AIG
Sbjct: 58 ALADLAGEDTERAAEEIRSSRPTAVNLFWAVDRVMKSGSPLDEALKIYREDMETNRAIGA 117
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK-IVDIKDKQFP 151
+GA + D + +LTHCN G+LA +YGTALGV+R+ K I I D+ P
Sbjct: 118 HGASIIHDGD------TILTHCNAGALACVDYGTALGVVRAARDQGKNITVICDETRP 169
>gi|427740163|ref|YP_007059707.1| methylthioribose-1-phosphate isomerase [Rivularia sp. PCC 7116]
gi|427375204|gb|AFY59160.1| methylthioribose-1-phosphate isomerase [Rivularia sp. PCC 7116]
Length = 352
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + ++DQ LP V+I+ ED QAIK+M VRGAPAI + G+ + ++
Sbjct: 10 VIWHNDFVYLIDQTRLPAEYSYVEIHRSEDMAQAIKTMIVRGAPAIGVAAAYGMYLGARE 69
Query: 67 KQFPD-NELIQLIE---------------------------------------SMLE--- 83
+ D +E + +E ++LE
Sbjct: 70 IETSDRHEFLTRLEQVAQMLRETRPTAVNLFWAISRILRTAYESIGTVEEIRKTLLETAQ 129
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ IG NG +AL + KL +LTHCN G+LATA YGTALG++RS
Sbjct: 130 TINAEDLQTCHRIGDNGLKALPETP---EKLTLLTHCNAGALATAGYGTALGIVRS 182
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A + + E V ++ L++ +++ +D+ IG NG
Sbjct: 89 LRETRPTAVNLFWAISRILRTAYE--SIGTVEEIRKTLLETAQTINAEDLQTCHRIGDNG 146
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+AL + KL +LTHCN G+LATA YGTALG++RS ++ + ETRP QG
Sbjct: 147 LKALPETP---EKLTLLTHCNAGALATAGYGTALGIVRSAFREGRLETLFAGETRPRLQG 203
Query: 287 AR 288
A+
Sbjct: 204 AK 205
>gi|253998566|ref|YP_003050629.1| methylthioribose-1-phosphate isomerase [Methylovorus glucosetrophus
SIP3-4]
gi|253985245|gb|ACT50102.1| translation initiation factor, aIF-2BI family [Methylovorus
glucosetrophus SIP3-4]
Length = 365
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 88/193 (45%), Gaps = 48/193 (24%)
Query: 8 IYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDK 67
+ E +++I+DQ LPH +V I NVE AIK MQVRGAP I G+ + I D
Sbjct: 14 VVEGGAVEIIDQTQLPHRLHIVRIENVEAMVHAIKHMQVRGAPLIGAAAAYGMALGIADG 73
Query: 68 QFPDNEL--------------------IQLIESML--------------------EKDIS 87
D ++ +Q ++ +L ++D++
Sbjct: 74 AL-DGDVERTGEVLLQSRPTAVNLRWAVQRMQRVLLALPEEERAVAAWREAAVICDEDVA 132
Query: 88 DNKAIGRNG---AQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
N+AIG++G +AL R S L +LTHCN G LAT ++GTAL I + H A
Sbjct: 133 LNQAIGQHGLSMLRALASARGRGSAAQPLQILTHCNAGWLATVDWGTALAPIYAAHEAGL 192
Query: 142 IVDIK-DKQFPDN 153
V + D+ P N
Sbjct: 193 AVHVWVDETRPRN 205
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A A YG ALG+ + +L+ V + L+ +RPTAVN++ A
Sbjct: 60 AAAAYGMALGIA-------------------DGALDGDVERTGEVLLQSRPTAVNLRWAV 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NP 235
++ L A P + + ++D++ N+AIG++G L L
Sbjct: 101 QRMQRVL----LALPEEERAVAAWREAAVICDEDVALNQAIGQHGLSMLRALASARGRGS 156
Query: 236 GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
L +LTHCN G LAT ++GTAL I + H A + ETRP NQGA
Sbjct: 157 AAQPLQILTHCNAGWLATVDWGTALAPIYAAHEAGLAVHVWVDETRPRNQGA 208
>gi|148259181|ref|YP_001233308.1| methylthioribose-1-phosphate isomerase [Acidiphilium cryptum JF-5]
gi|326402334|ref|YP_004282415.1| methylthioribose-1-phosphate isomerase [Acidiphilium multivorum
AIU301]
gi|338983763|ref|ZP_08632922.1| MtnA [Acidiphilium sp. PM]
gi|218526588|sp|A5FUV7.1|MTNA_ACICJ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|146400862|gb|ABQ29389.1| methylthioribose-1-phosphate isomerase [Acidiphilium cryptum JF-5]
gi|325049195|dbj|BAJ79533.1| methylthioribose-1-phosphate isomerase [Acidiphilium multivorum
AIU301]
gi|338207308|gb|EGO95286.1| MtnA [Acidiphilium sp. PM]
Length = 367
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 105 PRVSKLNVLTHCNTGSL--------ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSL 156
PR++ + H + L ATA YG AL + + P +++L
Sbjct: 36 PRLTTPEQIAHAISAMLVRGAPLIGATAAYGVALAM---------------RADPSDEAL 80
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
E V L + RPTA+N++ A ++ +LS A P ++ ++D+
Sbjct: 81 ETVV----PMLAATRPTAINLRWALMRMQRALS----AHPPAERADAAYAEAAAICDEDV 132
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ N+AIG +G + G ++N+LTHCN G +AT ++GTAL I H A
Sbjct: 133 ATNRAIGEHGLGLIRARAQGRRRVNILTHCNAGWIATVDWGTALAPIYMAHDAGIDVHVL 192
Query: 277 CTETRPYNQG 286
ETRP NQG
Sbjct: 193 VDETRPRNQG 202
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 44/195 (22%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
++ S++I+DQ LP ++ + E AI +M VRGAP I G+ + ++
Sbjct: 17 DRWSVRIIDQTKLPWAIEIPRLTTPEQIAHAISAMLVRGAPLIGATAAYGVALAMRAD-- 74
Query: 70 PDNELIQLIESML-----------------------------------------EKDISD 88
P +E ++ + ML ++D++
Sbjct: 75 PSDEALETVVPMLAATRPTAINLRWALMRMQRALSAHPPAERADAAYAEAAAICDEDVAT 134
Query: 89 NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI-KD 147
N+AIG +G + ++N+LTHCN G +AT ++GTAL I H A V + D
Sbjct: 135 NRAIGEHGLGLIRARAQGRRRVNILTHCNAGWIATVDWGTALAPIYMAHDAGIDVHVLVD 194
Query: 148 KQFPDNDSLEKYVGE 162
+ P N E
Sbjct: 195 ETRPRNQGFSLTAWE 209
>gi|218296454|ref|ZP_03497197.1| translation initiation factor, aIF-2BI family [Thermus aquaticus
Y51MC23]
gi|218243248|gb|EED09779.1| translation initiation factor, aIF-2BI family [Thermus aquaticus
Y51MC23]
Length = 330
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 84/194 (43%), Gaps = 35/194 (18%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD------ 63
E+ +LDQ LP V + ++ QAI+ M VRGAPAI + G+V+
Sbjct: 12 EEGVFWLLDQRRLPQEEVWVPVRTAQEMAQAIRDMVVRGAPAIGVSAAFGMVLAHMAGED 71
Query: 64 -------IKDKQFPDNELIQLIESM------LEKDISDNKAIGRN---GAQALIDLNPRV 107
++ + L ++ M L+ + + KA+ R +A+ +V
Sbjct: 72 LEEADRLLRQSRPTAVNLFHALDRMRPHFGDLKGSLEEAKALWREVEETERAISQHGAKV 131
Query: 108 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYL 167
K VLTHCNTG LAT +GTALG I H ++ + +V E YL
Sbjct: 132 LKGQVLTHCNTGPLATGGWGTALGAILEAHRQGRVCHV-------------WVDETRPYL 178
Query: 168 VSARPTAVNMKRAA 181
AR TA + RA
Sbjct: 179 QGARLTAFELMRAG 192
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 22/137 (16%)
Query: 156 LEKYVGEKLD----YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
L GE L+ L +RPTAVN+ A D ++ + K S ++ +++
Sbjct: 64 LAHMAGEDLEEADRLLRQSRPTAVNLFHALDRMRPHFGD-LKGS---------LEEAKAL 113
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+ +AI ++GA+ L K VLTHCNTG LAT +GTALG I H +
Sbjct: 114 WREVEETERAISQHGAKVL--------KGQVLTHCNTGPLATGGWGTALGAILEAHRQGR 165
Query: 272 IGAAYCTETRPYNQGAR 288
+ + ETRPY QGAR
Sbjct: 166 VCHVWVDETRPYLQGAR 182
>gi|427414240|ref|ZP_18904430.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella ratti
ACS-216-V-Col6b]
gi|425714616|gb|EKU77619.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella ratti
ACS-216-V-Col6b]
Length = 367
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 14/126 (11%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK-DISD---NKAI 222
L RPTA+N+ A D + +++ P + + T L LIE+ + D+ D N A+
Sbjct: 102 LKETRPTAINLAWAIDRIVTNI-----VFPSDALVTAL-PLIEAEAKAIDLEDQRLNAAM 155
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
+ GA L G + +LTHCN G+LATA GTALGV+R LH N++ Y ETRP
Sbjct: 156 AKAGAT----LFEGKKGIRILTHCNAGALATAGLGTALGVVRELHANNQLERVYADETRP 211
Query: 283 YNQGAR 288
QGAR
Sbjct: 212 LLQGAR 217
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 53/190 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+S++SI + SL +LDQ LP+ +D + +AIK ++VRGAPAI + GL+
Sbjct: 16 ESMKSITWNGESLILLDQTKLPNQETYIDCTDWRQVAEAIKKLRVRGAPAIGVAAGYGLI 75
Query: 62 VDIKDK------------------------------------------QFPDNELIQ--- 76
+ K+ FP + L+
Sbjct: 76 LAAKEAIASASDEVTQRANFLTFANTLKETRPTAINLAWAIDRIVTNIVFPSDALVTALP 135
Query: 77 LIESMLEK-DISD---NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
LIE+ + D+ D N A+ + GA L + +LTHCN G+LATA GTALGV
Sbjct: 136 LIEAEAKAIDLEDQRLNAAMAKAGAT----LFEGKKGIRILTHCNAGALATAGLGTALGV 191
Query: 133 IRSLHGANKI 142
+R LH N++
Sbjct: 192 VRELHANNQL 201
>gi|392954009|ref|ZP_10319561.1| translation initiation factor 2B subunit I [Hydrocarboniphaga
effusa AP103]
gi|391857908|gb|EIT68438.1| translation initiation factor 2B subunit I [Hydrocarboniphaga
effusa AP103]
Length = 337
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 13/122 (10%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L+ +RPTAVN++ A ++ S+ A A K L + I + E+D++ N A+G G
Sbjct: 83 LMESRPTAVNLRWALLRMRELKSQGADA------KALLAEAIR-IHEEDLAQNLAMGEAG 135
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A AL+ N V+THCNTG+LAT +GTALGVIRS ++ Y ETRP+ QG
Sbjct: 136 A-ALLPPN-----AVVITHCNTGALATGGHGTALGVIRSAWARGRLSQVYNGETRPWLQG 189
Query: 287 AR 288
AR
Sbjct: 190 AR 191
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 97/207 (46%), Gaps = 52/207 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ II+ LK++DQ +LP+ + VD + + AI M VRGAPAI I GLV+D
Sbjct: 10 IRPIIWADDHLKLIDQRVLPNEERWVDCRSAAEVADAIHGMAVRGAPAIGIAAAYGLVLD 69
Query: 64 I---KDKQFPDNELIQ----------------------------LIESML--EKDISDNK 90
+D + D L++ L E++ E+D++ N
Sbjct: 70 ALAGRDYEAADRVLMESRPTAVNLRWALLRMRELKSQGADAKALLAEAIRIHEEDLAQNL 129
Query: 91 AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQF 150
A+G GA AL+ N V+THCNTG+LAT +GTALGVIRS ++ +
Sbjct: 130 AMGEAGA-ALLPPN-----AVVITHCNTGALATGGHGTALGVIRSAWARGRLSQV----- 178
Query: 151 PDNDSLEKYVGEKLDYLVSARPTAVNM 177
Y GE +L AR TA +
Sbjct: 179 --------YNGETRPWLQGARLTAWEL 197
>gi|345017874|ref|YP_004820227.1| methylthioribose-1-phosphate isomerase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033217|gb|AEM78943.1| Methylthioribose-1-phosphate isomerase [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 345
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+F + +S K + E L+ L +RPTAVN+ A + +K + E K + + L
Sbjct: 65 KEFINEEKESFFKKMEEALEILSKSRPTAVNLMWAINRMKKVI-ENNKELGLQDLYELLK 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVI 263
+ +++ +DI NK + + G + + K N +LTHCNTG+LAT YGTALGVI
Sbjct: 124 KEADNIYYEDIETNKKMAKFGNEII--------KENAVILTHCNTGALATVGYGTALGVI 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R H + K Y ETRP QGA+
Sbjct: 176 REAHYSGKNIFVYADETRPRLQGAK 200
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 85/185 (45%), Gaps = 46/185 (24%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +++I ++ L ++DQ LP++ ++ + +D AIK M VRGAPAI G+
Sbjct: 1 MGEIKTIEFKDGVLYLIDQRKLPNSYEIFECRTYKDVNFAIKDMVVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNE---LIQLIESMLE--------------------KDISDNKAIGRNGA 97
V + K+F + E + +E LE K I +NK +G
Sbjct: 61 V--LAAKEFINEEKESFFKKMEEALEILSKSRPTAVNLMWAINRMKKVIENNKELGLQDL 118
Query: 98 QAL------------IDLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSL 136
L I+ N +++K +LTHCNTG+LAT YGTALGVIR
Sbjct: 119 YELLKKEADNIYYEDIETNKKMAKFGNEIIKENAVILTHCNTGALATVGYGTALGVIREA 178
Query: 137 HGANK 141
H + K
Sbjct: 179 HYSGK 183
>gi|149374308|ref|ZP_01892082.1| putative initiation factor 2 subunit [Marinobacter algicola DG893]
gi|149361011|gb|EDM49461.1| putative initiation factor 2 subunit [Marinobacter algicola DG893]
Length = 354
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL R G + +IK + + L ++RPTAVN+ A
Sbjct: 66 SAAYGVALAA-RHAGGGDWKTEIK---------------QAIRELAASRPTAVNLFWALQ 109
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ SE + RL + + + D+S N A+ + A A +D + +V
Sbjct: 110 KMEQVFSE---CHSLEEAVKRLSETAVQIHKDDLSANLAMA-DYALAHMDAS---KPFSV 162
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LAT YGTALGVIR LH + Y ETRP+ QG+R
Sbjct: 163 LTHCNTGALATGGYGTALGVIRRLHEKKLLKDVYADETRPWLQGSR 208
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 88/210 (41%), Gaps = 52/210 (24%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
+ SL++LDQ LLP + + Q+I+ M VRGAPAI I G+ + +
Sbjct: 20 WHGGSLELLDQRLLPDQEHWITLEGSAGVAQSIRDMVVRGAPAIGISAAYGVALAARHAG 79
Query: 69 FPD---------NEL-------------IQLIESMLEKDISDNKAIGRNGAQALI----D 102
D EL +Q +E + + S +A+ R A+ D
Sbjct: 80 GGDWKTEIKQAIRELAASRPTAVNLFWALQKMEQVFSECHSLEEAVKRLSETAVQIHKDD 139
Query: 103 LNPRVS-------------KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
L+ ++ +VLTHCNTG+LAT YGTALGVIR LH + D+
Sbjct: 140 LSANLAMADYALAHMDASKPFSVLTHCNTGALATGGYGTALGVIRRLHEKKLLKDV---- 195
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
Y E +L +R TA + R
Sbjct: 196 ---------YADETRPWLQGSRLTAWELAR 216
>gi|429091929|ref|ZP_19154580.1| Methylthioribose-1-phosphate isomerase [Cronobacter dublinensis
1210]
gi|426743449|emb|CCJ80693.1| Methylthioribose-1-phosphate isomerase [Cronobacter dublinensis
1210]
Length = 339
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 72/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ L+ L +ARPTAVN+ D +K +L++ A+ + RL+Q + E+
Sbjct: 75 LGQALEVLRAARPTAVNLMNNLDRMKQALAQPDYATALGAEALRLVQEDRELCER----- 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I R G+ AL+ PG S+L LTHCNTG LATA GTALGVI H + + E
Sbjct: 130 --IARAGS-ALV--TPG-SRL--LTHCNTGGLATAGVGTALGVIARAHEEGNVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 42/182 (23%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG-- 56
M++LQ S+ ++L ILDQ LP + + V+ I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVVDNTLWILDQQALPQQKNWLPADTVDALIGHIHALRVRGAPLIGLSASL 60
Query: 57 -------------CLGLVVDIKDKQFPD-----NELIQLIESMLEKDISDNKAIGRNGAQ 98
LG +++ P N L ++ +++ + D + GA+
Sbjct: 61 LLALLAEHGMTRDALGQALEVLRAARPTAVNLMNNLDRMKQALAQPDYATAL-----GAE 115
Query: 99 ALI------DLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
AL +L R+++ +LTHCNTG LATA GTALGVI H +
Sbjct: 116 ALRLVQEDRELCERIARAGSALVTPGSRLLTHCNTGGLATAGVGTALGVIARAHEEGNVA 175
Query: 144 DI 145
++
Sbjct: 176 NV 177
>gi|84496001|ref|ZP_00994855.1| putative initiation factor eIF-2B alpha subunit [Janibacter sp.
HTCC2649]
gi|84382769|gb|EAP98650.1| putative initiation factor eIF-2B alpha subunit [Janibacter sp.
HTCC2649]
Length = 354
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 86/168 (51%), Gaps = 39/168 (23%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD--KQFP 70
++++LDQ LLP ++ + +D AI+ + VRGAPA+ + G LG+VV + + ++
Sbjct: 19 AVRLLDQTLLPLRTEFRTVERTDDLVTAIRELAVRGAPALGVAGALGVVVAMDEAAREGW 78
Query: 71 DNELIQ---------------------------------LIESMLE---KDISDNKAIGR 94
D++ ++ ++E+ L +D + N+ + R
Sbjct: 79 DDQALRAAVDRVRHARPTAVNLAWGVDEVLPLMAAGRGAVLEAALRLAHEDEAANRQLSR 138
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
A L++ R +L VLTHCN G LAT+ +GTA+GVI+ LH +++
Sbjct: 139 LAADWLLERIDR-PRLRVLTHCNAGILATSGWGTAVGVIKELHARDRV 185
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 82/162 (50%), Gaps = 19/162 (11%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
ALGV +L G +D ++ D+ +L V D + ARPTAVN+ D V +
Sbjct: 57 ALGVAGAL-GVVVAMDEAAREGWDDQALRAAV----DRVRHARPTAVNLAWGVDEVLPLM 111
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL--NPGVSKLNVLTHC 246
+ A V RL +D + N+ + R A L++ P +L VLTHC
Sbjct: 112 A--AGRGAVLEAALRLAH-------EDEAANRQLSRLAADWLLERIDRP---RLRVLTHC 159
Query: 247 NTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
N G LAT+ +GTA+GVI+ LH +++ Y ETRP QGAR
Sbjct: 160 NAGILATSGWGTAVGVIKELHARDRVELVYADETRPLLQGAR 201
>gi|51893206|ref|YP_075897.1| methylthioribose-1-phosphate isomerase [Symbiobacterium
thermophilum IAM 14863]
gi|81388582|sp|Q67MP0.1|MTNA_SYMTH RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|51856895|dbj|BAD41053.1| translation initiation factor eIF-2B alpha subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 359
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
YL SARPTAVN+ A D +++ L + P+ +K L E++ E+D N+ IG
Sbjct: 88 YLASARPTAVNLFWALDRMEACLLR-HRDRPIPEIKEALRAEAEAIREEDARANRTIGE- 145
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
AL L PG + +LTHCN G+LATA YGTAL I + ETRP Q
Sbjct: 146 --YALSLLKPG---MGILTHCNAGALATAAYGTALAPIYLGQERGYNFRVFADETRPLLQ 200
Query: 286 GAR 288
GAR
Sbjct: 201 GAR 203
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 42/163 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
+L I+DQ L+P+ ++ + + E+ ++AI+S++VRGAPAI I +GL + +K + D
Sbjct: 16 ALVIVDQTLIPNETRYLRLTTPEETWEAIRSLRVRGAPAIGIAAAMGLYLGVKGSEAADF 75
Query: 73 E----------------------LIQLIESM-------LEKDISDNKAIGRNGAQALIDL 103
E L ++ M ++ I + K R A+A+ +
Sbjct: 76 EDFYHEFRQVKAYLASARPTAVNLFWALDRMEACLLRHRDRPIPEIKEALRAEAEAIREE 135
Query: 104 NPRVSK-------------LNVLTHCNTGSLATAEYGTALGVI 133
+ R ++ + +LTHCN G+LATA YGTAL I
Sbjct: 136 DARANRTIGEYALSLLKPGMGILTHCNAGALATAAYGTALAPI 178
>gi|386001621|ref|YP_005919920.1| Methylthioribose-1-phosphate isomerase [Methanosaeta harundinacea
6Ac]
gi|357209677|gb|AET64297.1| Methylthioribose-1-phosphate isomerase [Methanosaeta harundinacea
6Ac]
Length = 340
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V E + +ARPTAVN+ D ++ E ++ V ++ + E + +D+S N
Sbjct: 78 VREAAGVIRAARPTAVNLSWGVDRAVKAVDEMGGSAGVEEIRAAALAAAELIAGEDVSIN 137
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+A+G GA+ L D + VLTHCN G LA +GTALGVIRS K + Y E
Sbjct: 138 RALGDRGARLLEDGD------VVLTHCNAGRLACVGWGTALGVIRSAVAEGKKISVYSCE 191
Query: 280 TRPYNQGAR 288
TRP +QG+R
Sbjct: 192 TRPLHQGSR 200
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+S N+A+G GA+ L D + VLTHCN G LA +GTALGVIRS
Sbjct: 132 EDVSINRALGDRGARLLEDGD------VVLTHCNAGRLACVGWGTALGVIRS 177
>gi|269837150|ref|YP_003319378.1| translation initiation factor, aIF-2BI family [Sphaerobacter
thermophilus DSM 20745]
gi|269786413|gb|ACZ38556.1| translation initiation factor, aIF-2BI family [Sphaerobacter
thermophilus DSM 20745]
Length = 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 171 RPTAVNMKRAADSVKS-SLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQA 229
RPTAVN+ A + + L A T L +L+E +L++ + ++A+ G+ A
Sbjct: 92 RPTAVNLHWAIERARRVGLG----APDAATAVDWLDRLVERLLDQQWAADRALSELGS-A 146
Query: 230 LIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L+ VLTHCNTG+LAT YGTALGVIR+ H K+ Y E+RP QGAR
Sbjct: 147 LLPFG-----ARVLTHCNTGALATGAYGTALGVIRTAHEQGKVAMVYVDESRPRLQGAR 200
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 19/108 (17%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ L +L+E +L++ + ++A+ G+ AL+ RV LTHCNTG+LAT YGTALG
Sbjct: 120 DWLDRLVERLLDQQWAADRALSELGS-ALLPFGARV-----LTHCNTGALATGAYGTALG 173
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
VIR+ H K+ + YV E L AR T + R
Sbjct: 174 VIRTAHEQGKVAMV-------------YVDESRPRLQGARLTVWELTR 208
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGA 49
++ +++E+ L++LDQ LP + V +VE AI+ MQVRGA
Sbjct: 7 MRPLVWERGVLRLLDQTRLPEVERWVSAGSVEAVADAIRIMQVRGA 52
>gi|422348762|ref|ZP_16429654.1| S-methyl-5-thioribose-1-phosphate isomerase [Sutterella
wadsworthensis 2_1_59BFAA]
gi|404658814|gb|EKB31676.1| S-methyl-5-thioribose-1-phosphate isomerase [Sutterella
wadsworthensis 2_1_59BFAA]
Length = 362
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 44/163 (26%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
+++I+DQ LLP+ + + + D +AI++M+VRGAP I I G +V+ +K+ P+N
Sbjct: 19 AVEIVDQTLLPYRFEKRVLGDWRDCVEAIRTMRVRGAPLIGITGAWAVVLAVKEN--PEN 76
Query: 73 EL-----------------------------------------IQLIESMLEKDISDNKA 91
+ ++ E+M ++D+ +A
Sbjct: 77 DALLKAAEVIANARPTAVNLSWAVRRMMSTLLPRDPALRFEAAVKTAEAMTQEDVMTCRA 136
Query: 92 IGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYGTALGVI 133
IG G + DL R+ + +NVLTHCN G LAT +YGTAL I
Sbjct: 137 IGEAGMTLISDLYARLRRPVNVLTHCNAGWLATVDYGTALSPI 179
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS 195
+ GA +V + K+ P+ND+L K + + +ARPTAVN+ A + S+L A
Sbjct: 60 ITGAWAVV-LAVKENPENDALLK----AAEVIANARPTAVNLSWAVRRMMSTLLPRDPAL 114
Query: 196 PVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK-LNVLTHCNTGSLATA 254
++ E+M ++D+ +AIG G + DL + + +NVLTHCN G LAT
Sbjct: 115 RFEAA----VKTAEAMTQEDVMTCRAIGEAGMTLISDLYARLRRPVNVLTHCNAGWLATV 170
Query: 255 EYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+YGTAL I + ETRP NQG
Sbjct: 171 DYGTALSPIYMAFEQGTPLHVWVDETRPRNQG 202
>gi|337289052|ref|YP_004628524.1| Methylthioribose-1-phosphate isomerase [Thermodesulfobacterium sp.
OPB45]
gi|334902790|gb|AEH23596.1| Methylthioribose-1-phosphate isomerase [Thermodesulfobacterium
geofontis OPF15]
Length = 376
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVK-------SSLSEWAKASPVNTVKTRLIQLI 208
+E+ +G+ + LV+ARPTA+N+ A ++ E S + ++ L +
Sbjct: 97 VEEEIGKISNLLVTARPTAINLSWAVSRMRKISLNFLEKFKEKINKSELKQLEELLEKEA 156
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ ++DI N AI G L + +LTHCNTG+LAT YGTALG+IR +
Sbjct: 157 LKIWKEDIEANLAIADYGKDIL-------PEGGILTHCNTGALATGGYGTALGIIRKFYE 209
Query: 269 ANKIGAAYCTETRPYNQGAR 288
NK + ETRP+ QGAR
Sbjct: 210 KNKKIKIFVDETRPFLQGAR 229
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 20/99 (20%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+ ++DI N AI G L + +LTHCNTG+LAT YGTALG+IR + N
Sbjct: 159 IWKEDIEANLAIADYGKDIL-------PEGGILTHCNTGALATGGYGTALGIIRKFYEKN 211
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K + I +V E +L AR TA + +
Sbjct: 212 KKIKI-------------FVDETRPFLQGARLTAWELYK 237
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
S+++ + + L +LDQ LP K + +N+ AIK M VRGAPAI I +G V+
Sbjct: 19 SIKAWFWTEKGLYLLDQRKLPLEEKYIFCDNLNKIRTAIKEMVVRGAPAIGICSAIGFVI 78
Query: 63 DIKD 66
+ K+
Sbjct: 79 EFKN 82
>gi|298674071|ref|YP_003725821.1| aIF-2BI family translation initiation factor [Methanohalobium
evestigatum Z-7303]
gi|298287059|gb|ADI73025.1| translation initiation factor, aIF-2BI family [Methanohalobium
evestigatum Z-7303]
Length = 339
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+L K + + + + RPTAVN+ + V + S+ A +K I+ + + +
Sbjct: 72 DNLTKDLQSAAETIKATRPTAVNLAWGVERVIKATSD---AYDFEGMKNIAIEEAKQIAD 128
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGANKI 272
+D++ NK IG +G++ L D + VLTHCN G LA ++GTALGVIRS + I
Sbjct: 129 EDVAINKKIGEHGSKLLEDGD------TVLTHCNAGKLACVDWGTALGVIRSAIESGKNI 182
Query: 273 GAAYCTETRPYNQGAR 288
C ETRP NQG+R
Sbjct: 183 KVVAC-ETRPLNQGSR 197
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 52/172 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP------------------- 50
E +++K++DQ LLP K+++ +E ++IKS+++RGAP
Sbjct: 9 ESNTIKLIDQTLLPSEYKVIECKTIESLCESIKSLRIRGAPALGAAGGYGIALAAVLSKT 68
Query: 51 ---------------------------AIAIVGCLGLVVDIKDKQFPDNELIQLIESMLE 83
A + + D D + N I+ + + +
Sbjct: 69 DNMDNLTKDLQSAAETIKATRPTAVNLAWGVERVIKATSDAYDFEGMKNIAIEEAKQIAD 128
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D++ NK IG +G++ L D + VLTHCN G LA ++GTALGVIRS
Sbjct: 129 EDVAINKKIGEHGSKLLEDGD------TVLTHCNAGKLACVDWGTALGVIRS 174
>gi|302348615|ref|YP_003816253.1| translation initiation factor eIF-2B subunit 1 [Acidilobus
saccharovorans 345-15]
gi|302329027|gb|ADL19222.1| Putative translation initiation factor eIF-2B subunit 1 [Acidilobus
saccharovorans 345-15]
Length = 367
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAAD-SVKSSLSEWAKASPVNTVKTRLIQLIESML 212
+ L + E L + RPTA N+ A D + +++ + + + ++ +++ ++
Sbjct: 89 EELMNEIKEAYGVLAATRPTAYNLFWALDRTWRAAQRAFEVENDADAIREAVLREAFTIY 148
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
+D+ +N +GRNGA+ LID + ++THCNTGSLATA +GTALGVIR K
Sbjct: 149 VEDVENNVNMGRNGAK-LID-----NGDRIVTHCNTGSLATAGFGTALGVIRYAWHEGKS 202
Query: 273 GAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 203 IKVYADETRPLLQGAR 218
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 57/186 (30%)
Query: 17 LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------------- 62
+D LP + + +AIK M++RGAPAI + GL +
Sbjct: 33 IDTRQLPWNEVYIRTKDYNRVARAIKDMEIRGAPAIGVTAAFGLTLAAVHSKAKRAEELM 92
Query: 63 -DIKD---------------------------KQFP-DNELIQLIESMLEK-------DI 86
+IK+ + F +N+ + E++L + D+
Sbjct: 93 NEIKEAYGVLAATRPTAYNLFWALDRTWRAAQRAFEVENDADAIREAVLREAFTIYVEDV 152
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR-SLHGANKIVDI 145
+N +GRNGA+ LID R+ +THCNTGSLATA +GTALGVIR + H I
Sbjct: 153 ENNVNMGRNGAK-LIDNGDRI-----VTHCNTGSLATAGFGTALGVIRYAWHEGKSIKVY 206
Query: 146 KDKQFP 151
D+ P
Sbjct: 207 ADETRP 212
>gi|197120007|ref|YP_002140434.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
bemidjiensis Bem]
gi|254813649|sp|B5ED21.1|MTNA_GEOBB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|197089367|gb|ACH40638.1| S-methyl-5-thio-alpha-D-ribose-1-phosphate isomerase [Geobacter
bemidjiensis Bem]
Length = 346
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 69/118 (58%), Gaps = 7/118 (5%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN+ + +K + K +N+++ L S+ +D++ K IGR+GA AL
Sbjct: 89 RPTAVNLFWGLERMKRVALQ-HKELNLNSIRELLKAEAISIETEDLAICKEIGRHGA-AL 146
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+ G S +LTHCN G LATA YGTALGVIR H A K + ETRP+ QGAR
Sbjct: 147 V--KEGAS---ILTHCNAGGLATAGYGTALGVIRGAHEAGKGIRVFADETRPWLQGAR 199
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 25/131 (19%)
Query: 62 VDIKDKQFPDNELIQLIE----SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN 117
V ++ K+ N + +L++ S+ +D++ K IGR+GA AL+ ++LTHCN
Sbjct: 105 VALQHKELNLNSIRELLKAEAISIETEDLAICKEIGRHGA-ALVK-----EGASILTHCN 158
Query: 118 TGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
G LATA YGTALGVIR H A K + + F D E +L AR TA +
Sbjct: 159 AGGLATAGYGTALGVIRGAHEAGKGIRV----FAD---------ETRPWLQGARLTAWEL 205
Query: 178 KRAADSVKSSL 188
+ DS+ +L
Sbjct: 206 MK--DSIPVTL 214
>gi|326389975|ref|ZP_08211538.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
ethanolicus JW 200]
gi|392940771|ref|ZP_10306415.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermoanaerobacter
siderophilus SR4]
gi|325994035|gb|EGD52464.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
ethanolicus JW 200]
gi|392292521|gb|EIW00965.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermoanaerobacter
siderophilus SR4]
Length = 345
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+F + +S K + E L+ + +RPTAVN+ A + +K + E K + + L
Sbjct: 65 KEFINEEKESFFKKMEEALEIISKSRPTAVNLMWAINRMKKVI-ENNKELELQDLYELLK 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVI 263
+ +++ +DI NK + + G + + K N +LTHCNTG+LAT YGTALGVI
Sbjct: 124 KEADNIYYEDIETNKKMAKFGNEII--------KENAVILTHCNTGALATVGYGTALGVI 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R H + K Y ETRP QGA+
Sbjct: 176 REAHYSGKNIFVYADETRPRLQGAK 200
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 46/185 (24%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M +++I ++ L ++DQ LP++ ++ + +D AIK M VRGAPAI G+
Sbjct: 1 MGEIKTIEFKDGVLYLIDQRKLPNSYEIFECRTYKDVNFAIKDMVVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNE---LIQLIESMLE--------------------KDISDNKAIGRNGA 97
V + K+F + E + +E LE K I +NK +
Sbjct: 61 V--LAAKEFINEEKESFFKKMEEALEIISKSRPTAVNLMWAINRMKKVIENNKELELQDL 118
Query: 98 QAL------------IDLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSL 136
L I+ N +++K +LTHCNTG+LAT YGTALGVIR
Sbjct: 119 YELLKKEADNIYYEDIETNKKMAKFGNEIIKENAVILTHCNTGALATVGYGTALGVIREA 178
Query: 137 HGANK 141
H + K
Sbjct: 179 HYSGK 183
>gi|315650451|ref|ZP_07903521.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487247|gb|EFU77559.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 367
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV +L A ++ + D E+ E DY S+RPTAVN+ A + ++ +L
Sbjct: 62 AIGVCAALGIAKTASQVQADNYAD---FEREFLELKDYFASSRPTAVNLFWALNRMEDTL 118
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
+ ++ +K L + +++ +DI+ ++ IG G + L L ++ ++THCN
Sbjct: 119 KA-NRTKNIDEIKEILFKEADNIRSEDIAISRGIGELGFKLLKKLKRNGKEIGIMTHCNA 177
Query: 249 GSLATAEYGTALGVIRSLHGANKIGA---AYCTETRPYNQGAR 288
G+LATA+YGTA + +G+ YC ETRP QGAR
Sbjct: 178 GTLATAKYGTATAPMYMALENGFLGSDMHVYCDETRPLLQGAR 220
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 48/168 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---VVDIKD 66
E +L I+DQ LLP K +++N ED ++AIK ++VRGAPAI + LG+ ++
Sbjct: 21 EDGNLNIIDQTLLPGEIKRINLNTKEDIWEAIKKLRVRGAPAIGVCAALGIAKTASQVQA 80
Query: 67 KQFPDNE---------------------------------------------LIQLIESM 81
+ D E L + +++
Sbjct: 81 DNYADFEREFLELKDYFASSRPTAVNLFWALNRMEDTLKANRTKNIDEIKEILFKEADNI 140
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
+DI+ ++ IG G + L L ++ ++THCN G+LATA+YGTA
Sbjct: 141 RSEDIAISRGIGELGFKLLKKLKRNGKEIGIMTHCNAGTLATAKYGTA 188
>gi|422344588|ref|ZP_16425513.1| S-methyl-5-thioribose-1-phosphate isomerase [Selenomonas noxia
F0398]
gi|355376657|gb|EHG23899.1| S-methyl-5-thioribose-1-phosphate isomerase [Selenomonas noxia
F0398]
Length = 354
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D + E DYL S+RPTAVN+ A + ++ + E AK V ++T L +
Sbjct: 77 DYGEFARQFHEAADYLNSSRPTAVNLSWALNRMEKIVQE-AKGKSVPEIRTLLRDEALRI 135
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++DI K IG + AL + PG + +LTHCN G LATA+YGTA V+ H
Sbjct: 136 KQEDIDICKKIGEH---ALTLVKPG---MGLLTHCNAGQLATAKYGTATAVMYLGHQKGY 189
Query: 272 IGAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 190 NFKIYADETRPLLQGAR 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 42/170 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG-----LVVDI 64
E+H+L I+DQ LP+ ++ + + + + AI+ +QVRGAPAI +G L +D
Sbjct: 16 EEHALVIIDQTKLPNKAEYLRLKTQGEIWTAIRELQVRGAPAIGDAAAIGIYLAALEIDT 75
Query: 65 KD-----KQFPD-------------------NELIQLIESMLEKDISDNKAIGRNGA--- 97
D +QF + N + ++++ K + + + + R+ A
Sbjct: 76 DDYGEFARQFHEAADYLNSSRPTAVNLSWALNRMEKIVQEAKGKSVPEIRTLLRDEALRI 135
Query: 98 -QALIDLNPRVSK---------LNVLTHCNTGSLATAEYGTALGVIRSLH 137
Q ID+ ++ + + +LTHCN G LATA+YGTA V+ H
Sbjct: 136 KQEDIDICKKIGEHALTLVKPGMGLLTHCNAGQLATAKYGTATAVMYLGH 185
>gi|254503589|ref|ZP_05115740.1| methylthioribose-1-phosphate isomerase [Labrenzia alexandrii
DFL-11]
gi|222439660|gb|EEE46339.1| methylthioribose-1-phosphate isomerase [Labrenzia alexandrii
DFL-11]
Length = 367
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG AL + ND + + +L RPTA+N++ A
Sbjct: 60 ATAAYGVALAMA-------------------NDPSDANLDAAWTFLEKTRPTAINLRWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL---NPGVS 238
+ +++L K PV +QL + ++D+ N+ IG NG + + D+ P
Sbjct: 101 NRCRTAL----KLLPVEARAATALQLAHDISDEDVEINRRIGENGLKLIRDIAAQKPDGE 156
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+ +LTHCN G +AT ++GTA + H A + ETRP NQGA
Sbjct: 157 PVRLLTHCNAGWIATVDWGTATSPMYQAHDAGIPLHIWVDETRPRNQGA 205
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 47/189 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
E + L+I+DQ LPH K + +++ AI M+VRGAP I G+ + + +
Sbjct: 16 ELNCLQIIDQRWLPHKFKTQPVRTMQEFADAIVEMRVRGAPLIGATAAYGVALAMAND-- 73
Query: 70 PDNELIQLIESMLEK------------------------------------DISD----- 88
P + + + LEK DISD
Sbjct: 74 PSDANLDAAWTFLEKTRPTAINLRWALNRCRTALKLLPVEARAATALQLAHDISDEDVEI 133
Query: 89 NKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
N+ IG NG + + D+ P + +LTHCN G +AT ++GTA + H A + I
Sbjct: 134 NRRIGENGLKLIRDIAAQKPDGEPVRLLTHCNAGWIATVDWGTATSPMYQAHDAGIPLHI 193
Query: 146 K-DKQFPDN 153
D+ P N
Sbjct: 194 WVDETRPRN 202
>gi|262199913|ref|YP_003271122.1| translation initiation factor, aIF-2BI family [Haliangium ochraceum
DSM 14365]
gi|262083260|gb|ACY19229.1| translation initiation factor, aIF-2BI family [Haliangium ochraceum
DSM 14365]
Length = 369
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKS----SLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
+ +D+L +ARPTAVN+ A + +++ L + + V L + ++ ++DI
Sbjct: 91 QAIDHLATARPTAVNLFWALEQMRTLARAELDKLSDDGDTRAVALALDERARAIHKEDID 150
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
++IG GA + D VLTHCN G+LAT YGTALGV+R+ A K
Sbjct: 151 MCRSIGERGAGLIPD------GATVLTHCNAGALATGGYGTALGVLRAAREAGKNIRVIA 204
Query: 278 TETRPYNQGAR 288
ETRPY QGAR
Sbjct: 205 DETRPYLQGAR 215
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 21/98 (21%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK- 141
++DI ++IG GA + D VLTHCN G+LAT YGTALGV+R+ A K
Sbjct: 146 KEDIDMCRSIGERGAGLIPD------GATVLTHCNAGALATGGYGTALGVLRAAREAGKN 199
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
I I D+ P YL AR TA + R
Sbjct: 200 IRVIADETRP--------------YLQGARLTAWELLR 223
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +L ++DQL LP V +V ++AI++M VRGAPAI G+ ++
Sbjct: 15 WRDGALHLIDQLKLPAEEVWVSCADVASVHRAIQTMIVRGAPAIGCAAAYGVAIE 69
>gi|113475731|ref|YP_721792.1| methylthioribose-1-phosphate isomerase [Trichodesmium erythraeum
IMS101]
gi|123352333|sp|Q113K5.1|MTNA_TRIEI RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|110166779|gb|ABG51319.1| translation initiation factor 2B subunit I family (IF-2BI)
[Trichodesmium erythraeum IMS101]
Length = 353
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D + K + E RPTAVN+ A + + ++ V ++ +++ + +
Sbjct: 75 DRNEFLKQLEEIAVIFRRTRPTAVNLFWAIERILKVANK--TNGTVKEIQEAVLETAKKI 132
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D+ K IG + A ++ P KLN+LTHCN G+LATA YGTALGVIRS +
Sbjct: 133 HQEDLETCKNIG-DRAVEILPTKP--EKLNILTHCNAGALATAGYGTALGVIRSAWRDGR 189
Query: 272 IGAAYCTETRPYNQGAR 288
+G Y ETRP QGA+
Sbjct: 190 LGKVYADETRPRLQGAK 206
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 50/182 (27%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+ + I ++ + ++DQ LP K V+I++ E+ AIK+M VRGAPAI + G+
Sbjct: 5 FRKVNPITWKNDHVVLIDQTCLPEEYKTVEISSYEEMAVAIKTMIVRGAPAIGVSVAYGM 64
Query: 61 VVDIKDKQFPD-NELIQLIESML------------------------------------- 82
+ ++ D NE ++ +E +
Sbjct: 65 YLGARETVTNDRNEFLKQLEEIAVIFRRTRPTAVNLFWAIERILKVANKTNGTVKEIQEA 124
Query: 83 ---------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
++D+ K IG + L + KLN+LTHCN G+LATA YGTALGVI
Sbjct: 125 VLETAKKIHQEDLETCKNIGDRAVEIL---PTKPEKLNILTHCNAGALATAGYGTALGVI 181
Query: 134 RS 135
RS
Sbjct: 182 RS 183
>gi|305662504|ref|YP_003858792.1| translation initiation factor 2B subunit I family (IF-2BI)
[Ignisphaera aggregans DSM 17230]
gi|304377073|gb|ADM26912.1| translation initiation factor 2B subunit I family (IF-2BI)
[Ignisphaera aggregans DSM 17230]
Length = 351
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D L+ + + ++ L RPTA N+ A + + + LS S V ++ ++ S+
Sbjct: 78 DELKDIISKAIERLRRTRPTAFNLFWALNRISNVLSR--NYSSVEALRKAIVDEALSIYH 135
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI N IG G + + D + +LTHCN G+LATA +GTALGVIR+ K
Sbjct: 136 EDIETNIKIGEIGEKLIDDGD------TILTHCNAGALATAAFGTALGVIRAAWYNGKKI 189
Query: 274 AAYCTETRPYNQGAR 288
TETRP QGAR
Sbjct: 190 KVIATETRPVLQGAR 204
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
S+ +DI N IG G + + D + +LTHCN G+LATA +GTALGVIR+
Sbjct: 132 SIYHEDIETNIKIGEIGEKLIDDGD------TILTHCNAGALATAAFGTALGVIRA 181
>gi|302337938|ref|YP_003803144.1| translation initiation factor, aIF-2BI family [Spirochaeta
smaragdinae DSM 11293]
gi|301635123|gb|ADK80550.1| translation initiation factor, aIF-2BI family [Spirochaeta
smaragdinae DSM 11293]
Length = 349
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 20/167 (11%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG L +D + ++ + + + D L + RPTAVN++ A
Sbjct: 54 ATAAYGVYLAA-------------RDLSTLEGEAFLRELKKACDVLEATRPTAVNLRWAI 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ +L++ A +V RL + + + +DI N + G ++L P ++
Sbjct: 101 RRM-YTLADKESAKGSRSVTERLKKEADLIHAEDIETNHRMAEYG----VELVPEGAR-- 153
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCNTG+LATA +GTALGVIR + +K Y ETRP QGAR
Sbjct: 154 ILTHCNTGALATAGWGTALGVIRQAYSRDKSIFVYADETRPRLQGAR 200
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 42/183 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M+S+++I ++K +L ++DQ LP ++ ++ D AI+ M VRGAPAI G+
Sbjct: 1 MQSIETIAFKKGALHLIDQRKLPGHYEIFVCSDYRDVEFAIRDMVVRGAPAIGATAAYGV 60
Query: 61 VVDIKDKQFPDNELI--------QLIESMLEKDISDNKAIGR----------NGAQAL-- 100
+ +D + E ++E+ ++ AI R G++++
Sbjct: 61 YLAARDLSTLEGEAFLRELKKACDVLEATRPTAVNLRWAIRRMYTLADKESAKGSRSVTE 120
Query: 101 -------------IDLNPRVSKLNV---------LTHCNTGSLATAEYGTALGVIRSLHG 138
I+ N R+++ V LTHCNTG+LATA +GTALGVIR +
Sbjct: 121 RLKKEADLIHAEDIETNHRMAEYGVELVPEGARILTHCNTGALATAGWGTALGVIRQAYS 180
Query: 139 ANK 141
+K
Sbjct: 181 RDK 183
>gi|14600894|ref|NP_147419.1| methylthioribose-1-phosphate isomerase [Aeropyrum pernix K1]
gi|11132580|sp|Q9YE84.1|MTNA_AERPE RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|5104347|dbj|BAA79662.1| putative methylthioribose-1-phosphate isomerase [Aeropyrum pernix
K1]
Length = 370
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
S RPTA N+ A V ++SE + S V+ ++ + +D+ N IGR GA+
Sbjct: 107 STRPTAYNLFWATARVYGAVSEAFRRSGVDAAVRAGLEEATRIYVEDVRGNVEIGRVGAR 166
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L S VLTHCNTG+LATA +GTALGVIR K TETRP QGAR
Sbjct: 167 LL------ESGDTVLTHCNTGALATAGFGTALGVIRYAWMEGKDIRVITTETRPVLQGAR 220
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 6/51 (11%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+D+ N IGR GA+ L S VLTHCNTG+LATA +GTALGVIR
Sbjct: 152 EDVRGNVEIGRVGARLL------ESGDTVLTHCNTGALATAGFGTALGVIR 196
>gi|404475372|ref|YP_006706803.1| translation initiation factor, aIF-2BI family [Brachyspira
pilosicoli B2904]
gi|404436861|gb|AFR70055.1| translation initiation factor, aIF-2BI family [Brachyspira
pilosicoli B2904]
Length = 348
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 54/185 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++ +I + L ILDQ LLP T K + ++++ED+Y AIK ++VRGAPAI + L
Sbjct: 1 MPNIPTIRWSDDELYILDQTLLPVTVKEIKLSSIEDSYNAIKELKVRGAPAIGVAAAYSL 60
Query: 61 VVDI-KDKQFPDNELIQLIE---------------------------------------S 80
++D+ K+ + ++ I L+E +
Sbjct: 61 LIDLKKETKLSSDDFISLVEKRAKYLNSSRPTAVNLSYALNRMFNAINNKKDKTSLELYN 120
Query: 81 MLE--------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
MLE +DI + IG GA+ L D +LTHCN G LA + GTAL
Sbjct: 121 MLENEAKKIHSEDIDICQKIGEYGAELLKD------NTGILTHCNAGRLAVSGIGTALAP 174
Query: 133 IRSLH 137
+ + H
Sbjct: 175 MYTAH 179
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVK 201
++D+K + +D V ++ YL S+RPTAVN+ A + + ++++ + +
Sbjct: 61 LIDLKKETKLSSDDFISLVEKRAKYLNSSRPTAVNLSYALNRMFNAINNKKDKTSL---- 116
Query: 202 TRLIQLIESMLEK----DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
L ++E+ +K DI + IG GA+ L D N G+ LTHCN G LA + G
Sbjct: 117 -ELYNMLENEAKKIHSEDIDICQKIGEYGAELLKD-NTGI-----LTHCNAGRLAVSGIG 169
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TAL + + H Y ETRP QGAR
Sbjct: 170 TALAPMYTAHKNGVKIRVYADETRPLLQGAR 200
>gi|294791889|ref|ZP_06757037.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp.
6_1_27]
gi|294457119|gb|EFG25481.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp.
6_1_27]
Length = 354
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 165 DYLVSARPTAVNMKRAADSV----KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
+ L RPTA+N+ A D V K+++ + S V + T+ +I E+D+S N+
Sbjct: 83 EILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDLITKEAIIIH---EEDVSLNR 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ G+ L G + +LTHCN G+LAT GTALGV+R LH ++ Y ET
Sbjct: 140 RMAEAGST----LFEGKKNIRILTHCNAGALATGGLGTALGVVRKLHENGQLERVYADET 195
Query: 281 RPYNQGAR 288
RP QGAR
Sbjct: 196 RPLLQGAR 203
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 92/225 (40%), Gaps = 71/225 (31%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV--- 62
+I + K +L +LDQ LP V + +AIK ++VRGAPAI + GL++
Sbjct: 3 NIEWRKDTLILLDQTKLPTEITYVHCTDWRQVAEAIKMLRVRGAPAIGVAASYGLILAAM 62
Query: 63 --------------------DIKDKQFPD-------------------------NELIQL 77
+I + P +E++ L
Sbjct: 63 EAGRLEAPFSEQLTSLYEFSEILKETRPTAINLAWAVDRVISLVKTNVDSMSSMSEVVDL 122
Query: 78 I--ESML--EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
I E+++ E+D+S N+ + G+ L + +LTHCN G+LAT GTALGV+
Sbjct: 123 ITKEAIIIHEEDVSLNRRMAEAGST----LFEGKKNIRILTHCNAGALATGGLGTALGVV 178
Query: 134 RSLHGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNM 177
R LH +N LE+ Y E L AR TA +
Sbjct: 179 RKLH--------------ENGQLERVYADETRPLLQGARLTAFEL 209
>gi|254455642|ref|ZP_05069071.1| methylthioribose-1-phosphate isomerase [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082644|gb|EDZ60070.1| methylthioribose-1-phosphate isomerase [Candidatus Pelagibacter sp.
HTCC7211]
Length = 356
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 83/176 (47%), Gaps = 40/176 (22%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K ++I YEK+ +KI+DQ LPH K+ ++ V+D+ AIK M+VRGAP I G+
Sbjct: 6 KEYKTIWYEKNVVKIIDQTKLPHHFKITELKTVKDSINAIKEMKVRGAPLIGATAAYGIA 65
Query: 62 VDIKDKQFPD------NELI--------------------------QLIESMLE--KDIS 87
+ I++ D ELI QL+ L K+I
Sbjct: 66 LAIQENNDLDFIKKSAEELIQSRPTAINLKWAVDRTMKNLSGINSDQLLNITLNEAKEIC 125
Query: 88 DN-----KAIGRNGAQALIDL-NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
D + IG NG + + ++ N + +N+LTHCN G LAT +GTA I H
Sbjct: 126 DEDEKFCENIGINGLKIVEEIYNKKKDTVNILTHCNAGWLATINWGTATSPIYHAH 181
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 28/169 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG AL + +N+ L+ ++ + + L+ +RPTA+N+K A
Sbjct: 58 ATAAYGIALAI------------------QENNDLD-FIKKSAEELIQSRPTAINLKWAV 98
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIES--MLEKDISDNKAIGRNGAQALIDL-NPGVS 238
D +LS +N+ + I L E+ + ++D + IG NG + + ++ N
Sbjct: 99 DRTMKNLS------GINSDQLLNITLNEAKEICDEDEKFCENIGINGLKIVEEIYNKKKD 152
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCN G LAT +GTA I H + ETRP NQGA
Sbjct: 153 TVNILTHCNAGWLATINWGTATSPIYHAHKKGIPVHIWVDETRPRNQGA 201
>gi|397691590|ref|YP_006528844.1| methylthioribose-1-phosphate isomerase [Melioribacter roseus P3M]
gi|395813082|gb|AFN75831.1| Methylthioribose-1-phosphate isomerase [Melioribacter roseus P3M]
Length = 336
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
N+++E+ + + L S RPTAVN+ DS+K ++ K P V +LI+ + +
Sbjct: 68 NENVEEEFLKAYNRLKSTRPTAVNLFFGLDSIKEEFEKY-KNDP--RVYLKLIEAAKRLH 124
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
E DI + I NG L+ K+ VLTHCNTG+LAT GTAL VIR + +
Sbjct: 125 EDDIEMCEKIALNG------LSVFDRKMRVLTHCNTGALATGGSGTALNVIRRAYFNGFV 178
Query: 273 GAAYCTETRPYNQGAR 288
+ ETRP QG+R
Sbjct: 179 ECVHVDETRPLLQGSR 194
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 48/179 (26%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M ++++ ++ + ++DQ LP + + ++ E AI+ ++VRGAPAI + L
Sbjct: 1 MFKIEAVKFKDDKIILIDQTKLPLKEEYIVTDDYERIAIAIERLEVRGAPAIGVTAAYAL 60
Query: 61 VVDIKDK----------------------------------QFPDNE--------LIQLI 78
+ +K+K +F + LI+
Sbjct: 61 ALSVKNKNENVEEEFLKAYNRLKSTRPTAVNLFFGLDSIKEEFEKYKNDPRVYLKLIEAA 120
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ + E DI + I NG L+ K+ VLTHCNTG+LAT GTAL VIR +
Sbjct: 121 KRLHEDDIEMCEKIALNG------LSVFDRKMRVLTHCNTGALATGGSGTALNVIRRAY 173
>gi|418293361|ref|ZP_12905270.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
gi|379064753|gb|EHY77496.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri ATCC
14405 = CCUG 16156]
Length = 358
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTV 200
++ I+ + D D + + E L +RPTAVN+ A + ++ L+ P +
Sbjct: 68 VLAIRARTASDGD-WRQALEEDFKVLADSRPTAVNLFWALNQMRERLARLKPGEDPCAAL 126
Query: 201 KTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTAL 260
+ + I + ES D N A+ + G + LI + G + N LTHCNTG+LAT +GTAL
Sbjct: 127 EAQAISIHES----DREANLAMAQFGVE-LIRRHQGNPQ-NFLTHCNTGALATGGFGTAL 180
Query: 261 GVIRSLHGANKIGAAYCTETRPYNQGAR 288
GV+R+ H + Y ETRP+ QG+R
Sbjct: 181 GVLRAAHLEGLVERVYVDETRPWLQGSR 208
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+S++SI + L +LDQ LP + ++ AI+ M VRGAPAI I G+V
Sbjct: 9 ESVKSIEWAGGRLNLLDQRRLPIKEVWLGYDSAASVAGAIRDMVVRGAPAIGISAAYGVV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ I+ + D + Q +E K ++D++ N AL + R+++L
Sbjct: 69 LAIRARTASDGDWRQALEEDF-KVLADSRPTAVNLFWALNQMRERLARLKPGEDPCAALE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N LTHCNTG+LAT +GTALGV+R+ H
Sbjct: 128 AQAISIHESDREANLAMAQFGVELIRRHQGNPQNFLTHCNTGALATGGFGTALGVLRAAH 187
>gi|167037293|ref|YP_001664871.1| aIF-2BI family translation initiation factor [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040512|ref|YP_001663497.1| aIF-2BI family translation initiation factor [Thermoanaerobacter
sp. X514]
gi|256751726|ref|ZP_05492600.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
ethanolicus CCSD1]
gi|300914559|ref|ZP_07131875.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
sp. X561]
gi|307724205|ref|YP_003903956.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
sp. X513]
gi|320115709|ref|YP_004185868.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
brockii subsp. finnii Ako-1]
gi|218526935|sp|B0K8S2.1|MTNA_THEP3 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218526936|sp|B0K2V6.1|MTNA_THEPX RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|166854752|gb|ABY93161.1| putative translation initiation factor, aIF-2BI family
[Thermoanaerobacter sp. X514]
gi|166856127|gb|ABY94535.1| putative translation initiation factor, aIF-2BI family
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256749395|gb|EEU62425.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
ethanolicus CCSD1]
gi|300889494|gb|EFK84640.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
sp. X561]
gi|307581266|gb|ADN54665.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
sp. X513]
gi|319928800|gb|ADV79485.1| translation initiation factor, aIF-2BI family [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 345
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 79/145 (54%), Gaps = 13/145 (8%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
K+F D + + + E L+ + ++RPTAVN+ A +K + + + ++ + L
Sbjct: 65 KEFLKEDREIFFEKIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQA-LK 123
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN--VLTHCNTGSLATAEYGTALGVI 263
+ +S+ +DI NK + + G + + K N +LTHCNTG+LAT YGTALGVI
Sbjct: 124 KEADSIYLEDIETNKKMAKFGNEVI--------KENAVILTHCNTGALATVGYGTALGVI 175
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
R H + K Y ETRP QG++
Sbjct: 176 REAHYSGKNIFVYADETRPRLQGSK 200
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 86/183 (46%), Gaps = 42/183 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK ++SI ++ L ++DQ LP++ ++ + D AIK M VRGAPAI G+
Sbjct: 1 MKEIKSIEFKNEVLYLIDQRKLPNSYEIFECKTYRDVNFAIKEMVVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNELI-QLIESMLE-----KDISDN---------KAIGRNGAQALIDL-- 103
V+ K+ D E+ + IE LE + + N K I +N LID+
Sbjct: 61 VLAAKEFLKEDREIFFEKIEEALEVIANSRPTAVNLMWAVKRMKKVIEKNKELELIDIYQ 120
Query: 104 ----------------NPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHG 138
N +++K +LTHCNTG+LAT YGTALGVIR H
Sbjct: 121 ALKKEADSIYLEDIETNKKMAKFGNEVIKENAVILTHCNTGALATVGYGTALGVIREAHY 180
Query: 139 ANK 141
+ K
Sbjct: 181 SGK 183
>gi|239826368|ref|YP_002948992.1| methylthioribose-1-phosphate isomerase [Geobacillus sp. WCH70]
gi|259509712|sp|C5D7U5.1|MTNA_GEOSW RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|239806661|gb|ACS23726.1| translation initiation factor, aIF-2BI family [Geobacillus sp.
WCH70]
Length = 356
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 73/143 (51%), Gaps = 18/143 (12%)
Query: 152 DNDSLEKY---VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
+ +SLEK+ V + DYL S+RPTAVN+ A D + SS+ A S VN KT LI
Sbjct: 72 ETESLEKFKEHVRKDRDYLASSRPTAVNLFWALDRLVSSI---AHVSSVNEAKTTLIH-- 126
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ I D R G AL G VLT CN GS+ATA YGTAL +
Sbjct: 127 -EAIRIQIEDEDVCRRIGEHALSLFQNGD---RVLTICNAGSIATARYGTALA---PFYL 179
Query: 269 ANKIGA---AYCTETRPYNQGAR 288
A + G Y +ETRP QGAR
Sbjct: 180 AKEKGMNLHVYASETRPVLQGAR 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 70/170 (41%), Gaps = 46/170 (27%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+S+ + + IL+Q LP ++ +++ N+ED + AI +++VRGAPAI I GL +
Sbjct: 9 RSVEWNDTHITILNQQKLPLVTEYLELKNIEDVWDAIAALKVRGAPAIGITAAYGLALSA 68
Query: 65 ----------------KDKQF-----PD---------------------NEL-IQLIESM 81
KD+ + P NE LI
Sbjct: 69 QQYETESLEKFKEHVRKDRDYLASSRPTAVNLFWALDRLVSSIAHVSSVNEAKTTLIHEA 128
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ I D R G AL + VLT CN GS+ATA YGTAL
Sbjct: 129 IRIQIEDEDVCRRIGEHALSLFQ---NGDRVLTICNAGSIATARYGTALA 175
>gi|429195687|ref|ZP_19187699.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces ipomoeae
91-03]
gi|428668596|gb|EKX67607.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces ipomoeae
91-03]
Length = 527
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 43/183 (23%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
S+ ++ + +DQ LPH +L+ + V +AIK + VRGAPAI + G LG+ +
Sbjct: 8 SSLTWDDGVVVAIDQRALPHEYRLLRLETVGQLIEAIKDLAVRGAPAIGLAGALGVALSA 67
Query: 65 K-----------DKQFPDNELIQLIES-------------------------------ML 82
D+Q ++ +L E+ ML
Sbjct: 68 HLHRSGVGGTGLDEQAVRDDAARLAEARPTAVNLAWGVRRALARIGSGPEAVLAEALAML 127
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E+D + N+A R+ A + L P +L +LTHCNTG LATA GTALG I L +I
Sbjct: 128 EEDAAVNRAAVRHAADLVETLAPN-RRLRILTHCNTGRLATAAVGTALGTILELARRGRI 186
Query: 143 VDI 145
++
Sbjct: 187 EEV 189
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
E+ V + L ARPTAVN+ A V+ +L+ + + ++ +MLE+D
Sbjct: 81 EQAVRDDAARLAEARPTAVNL---AWGVRRALAR------IGSGPEAVLAEALAMLEEDA 131
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ N+A R+ A + L P +L +LTHCNTG LATA GTALG I L +I
Sbjct: 132 AVNRAAVRHAADLVETLAPN-RRLRILTHCNTGRLATAAVGTALGTILELARRGRIEEVL 190
Query: 277 CTETRPYNQGAR 288
ETRP QGAR
Sbjct: 191 VDETRPLLQGAR 202
>gi|431927116|ref|YP_007240150.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri RCH2]
gi|431825403|gb|AGA86520.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri RCH2]
Length = 358
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQL 207
+ D + + E L +RPTAVN+ A + ++ L P ++ + I
Sbjct: 74 RIADGGDWRQALEEDFKVLADSRPTAVNLFWALNQMRERLERLKPGEDPYAALEAQAI-- 131
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
S+ + D N A+ + G LI + G S N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 132 --SIHDSDREANLAMAQFGVD-LIRRHQG-SPQNLLTHCNTGALATGGFGTALGVIRAAH 187
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ Y ETRP+ QG+R
Sbjct: 188 LEGLVERVYVDETRPWLQGSR 208
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI+ M VRGAPAI I LV
Sbjct: 9 EKVKSIEWLDGRLNLLDQRKLPVEEVWCSYDSAASIAAAIRDMVVRGAPAIGISAAYALV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ ++ + + Q +E K ++D++ N AL + R+ +L
Sbjct: 69 LAVRVRIADGGDWRQALEEDF-KVLADSRPTAVNLFWALNQMRERLERLKPGEDPYAALE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AQAISIHDSDREANLAMAQFGVDLIRRHQGSPQNLLTHCNTGALATGGFGTALGVIRAAH 187
>gi|332253028|ref|XP_003275654.1| PREDICTED: methylthioribose-1-phosphate isomerase isoform 2
[Nomascus leucogenys]
Length = 322
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIK 65
+++
Sbjct: 62 ELQ 64
>gi|91978865|ref|YP_571524.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris
BisB5]
gi|91685321|gb|ABE41623.1| translation initiation factor 2B subunit I family (IF-2BI)
[Rhodopseudomonas palustris BisB5]
Length = 374
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG AL + D+ + +G D L++ RPTA+N+K A
Sbjct: 60 ATAAYGIALAM-------------------REDASDAALGLAYDKLIATRPTAINLKWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL-----NPG 236
D ++ +L A V R ++ ++D++ N+AIG NG + LI+ PG
Sbjct: 101 DEMRRALVPVKPADRVAAAYKRASEI----ADEDVAINQAIGANGLK-LIEAIAATKKPG 155
Query: 237 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
++NVLTHCN G LAT ++GTA I Y ETRP NQGA
Sbjct: 156 -ERVNVLTHCNAGWLATVDWGTATAPIYQAFDRGIAIHVYADETRPRNQGA 205
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 44/173 (25%)
Query: 5 QSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+SI E + +DQ LPH + + N + A AI++M VRGAP I G+ +
Sbjct: 9 RSIWLEPDGWTVAAIDQRRLPHEYVVARLTNCDRAADAIRTMLVRGAPLIGATAAYGIAL 68
Query: 63 DIKDK-----------------------QFPDNELIQLI----------------ESMLE 83
+++ ++ +E+ + + + +
Sbjct: 69 AMREDASDAALGLAYDKLIATRPTAINLKWALDEMRRALVPVKPADRVAAAYKRASEIAD 128
Query: 84 KDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+D++ N+AIG NG +A+ ++NVLTHCN G LAT ++GTA I
Sbjct: 129 EDVAINQAIGANGLKLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAPI 181
>gi|410671399|ref|YP_006923770.1| aIF-2BI family translation initiation factor [Methanolobus
psychrophilus R15]
gi|409170527|gb|AFV24402.1| aIF-2BI family translation initiation factor [Methanolobus
psychrophilus R15]
Length = 347
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 9/120 (7%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
+ RPTAVN+ D V + S+ A V ++ + +++ ++D++ NK IG++GA+
Sbjct: 95 ATRPTAVNLAWGVDRVIDATSD---AYDVEGIRDIALSEAKNIADEDVATNKMIGKHGAK 151
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L D + V+T+CN G +A ++GTALGV+RS A K ETRP NQG+R
Sbjct: 152 LLKDGD------TVMTYCNAGRMACVDWGTALGVVRSAVEAGKKTNVIACETRPLNQGSR 205
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Query: 34 VEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNELIQLI-----ESMLEKDISD 88
+ D + A K+++ A+ + + V+D + D E I+ I +++ ++D++
Sbjct: 83 IRDMHIAAKTIKATRPTAVNLAWGVDRVIDATSDAY-DVEGIRDIALSEAKNIADEDVAT 141
Query: 89 NKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
NK IG++GA+ L D + V+T+CN G +A ++GTALGV+RS A K
Sbjct: 142 NKMIGKHGAKLLKDGD------TVMTYCNAGRMACVDWGTALGVVRSAVEAGK 188
>gi|389840081|ref|YP_006342165.1| S-methyl-5-thioribose-1-phosphate isomerase [Cronobacter sakazakii
ES15]
gi|387850557|gb|AFJ98654.1| S-methyl-5-thioribose-1-phosphate isomerase [Cronobacter sakazakii
ES15]
Length = 339
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+G+ L+ L +ARPTAVN+ D +K +L++ + + RL+Q + E+
Sbjct: 75 LGQALEVLRAARPTAVNLMNNLDRMKQALTQPDFVAALGAEALRLVQEDRELCER----- 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
I G++ + PG S+L LTHCNTG LATA GTALGVI H A K+ + E
Sbjct: 130 --IALAGSELV---TPG-SRL--LTHCNTGGLATAGVGTALGVIARAHEAGKVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 42/182 (23%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVG-- 56
M++LQ S+ + L ILDQ LP + +N E I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVVDNKLWILDQQALPQQKNWLPADNTEALVGHIHALRVRGAPLIGLSASL 60
Query: 57 -------------CLGLVVDIKDKQFPD-----NELIQLIESMLEKDISDNKAIGRNGAQ 98
LG +++ P N L ++ +++ + D + GA+
Sbjct: 61 LLALLAEHGMTRDALGQALEVLRAARPTAVNLMNNLDRMKQALTQPDF-----VAALGAE 115
Query: 99 ALI------DLNPRV----SKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
AL +L R+ S+L +LTHCNTG LATA GTALGVI H A K+
Sbjct: 116 ALRLVQEDRELCERIALAGSELVTPGSRLLTHCNTGGLATAGVGTALGVIARAHEAGKVA 175
Query: 144 DI 145
++
Sbjct: 176 NV 177
>gi|339494301|ref|YP_004714594.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
gi|338801673|gb|AEJ05505.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri ATCC
17588 = LMG 11199]
Length = 358
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 74/136 (54%), Gaps = 7/136 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESML 212
D + + E + L ++RPTAVN+ A + ++ L P ++ + I + ES
Sbjct: 79 DDWRQALEEDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEAQAISIHES-- 136
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
D N A+ + G LI + G + N+LTHCNTG+LAT +GTALGVIR+ H +
Sbjct: 137 --DREANLAMAQFGVD-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAHLDGLV 192
Query: 273 GAAYCTETRPYNQGAR 288
Y ETRP+ QG+R
Sbjct: 193 ERVYVDETRPWLQGSR 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 59/187 (31%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI++M VRGAPAI I LV
Sbjct: 9 EKVKSIEWHGDRLSLLDQRKLPTEEVWHSCDSAAAVADAIRNMVVRGAPAIGISAAYALV 68
Query: 62 VDIKDKQFPDNELIQLIE------------------------------------------ 79
+ + + ++ Q +E
Sbjct: 69 LAARTRMAAGDDWRQALEEDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEA 128
Query: 80 ---SMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAEYGTAL 130
S+ E D N A+ + G +DL NP+ N+LTHCNTG+LAT +GTAL
Sbjct: 129 QAISIHESDREANLAMAQFG----VDLIRRHQGNPQ----NLLTHCNTGALATGGFGTAL 180
Query: 131 GVIRSLH 137
GVIR+ H
Sbjct: 181 GVIRAAH 187
>gi|335040382|ref|ZP_08533512.1| translation initiation factor, aIF-2BI family [Caldalkalibacillus
thermarum TA2.A1]
gi|334179769|gb|EGL82404.1| translation initiation factor, aIF-2BI family [Caldalkalibacillus
thermarum TA2.A1]
Length = 282
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
YL S+RPTAVN+ A D ++ L + K PV +KT L E + +D ++IG +
Sbjct: 91 YLASSRPTAVNLFWALDRMEKRLVK-EKDKPVQAIKTALKDEAEQIRAEDEQVCRSIGEH 149
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
AL L PG +LTHCN G++ATA+YGTAL I Y ETRP Q
Sbjct: 150 ---ALSLLEPG---WGILTHCNAGTIATAKYGTALAPIYLGQERGYNFKVYADETRPLLQ 203
Query: 286 GAR 288
GAR
Sbjct: 204 GAR 206
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 48/166 (28%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD--------- 63
+L +LDQ LLP+ V++ +E+ ++AI ++VRGAPAI I G+ +
Sbjct: 19 ALVLLDQTLLPNEKVFVELKEMEEIWEAIYHLKVRGAPAIGIAAAYGVYLAAKKSAAENY 78
Query: 64 -----------------------------------IKDKQFPDNELIQLIESMLEKDISD 88
+K+K P + ++ E+ ++
Sbjct: 79 EQLYADFKQAKAYLASSRPTAVNLFWALDRMEKRLVKEKDKPVQAIKTALKDEAEQIRAE 138
Query: 89 NKAIGRN-GAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
++ + R+ G AL L P +LTHCN G++ATA+YGTAL I
Sbjct: 139 DEQVCRSIGEHALSLLEP---GWGILTHCNAGTIATAKYGTALAPI 181
>gi|312143653|ref|YP_003995099.1| translation initiation factor, aIF-2BI family [Halanaerobium
hydrogeniformans]
gi|311904304|gb|ADQ14745.1| translation initiation factor, aIF-2BI family [Halanaerobium
hydrogeniformans]
Length = 347
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 69/123 (56%), Gaps = 9/123 (7%)
Query: 167 LVSARPTAVNMKRAADSV-KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
L++ARPTAVN+ A + + + +L K+ + T L +++ + D NK + N
Sbjct: 85 LIAARPTAVNLSWAVEQLLELALDNLDKSK--DEFLTILKNKADNIADSDRKINKKMAEN 142
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G LI N + LTHCN G+LAT EYGTALGVIR H +NK + ETRP Q
Sbjct: 143 G-NTLIKDNAVI-----LTHCNAGALATVEYGTALGVIREAHFSNKNIKVFADETRPRLQ 196
Query: 286 GAR 288
GAR
Sbjct: 197 GAR 199
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 46/185 (24%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+++ ++ LK+LDQ LP + N +D AI M VRGAPAI G +
Sbjct: 4 ETMYFKDEQLKLLDQRKLPGEIEYFSCKNYQDTEFAISDMVVRGAPAIGAAAAYGFY--L 61
Query: 65 KDKQFPD--------------NELI--------------QLIE---SMLEKDISDNKAIG 93
+F D ELI QL+E L+K + I
Sbjct: 62 AALEFADLEKVELKKELKKAAEELIAARPTAVNLSWAVEQLLELALDNLDKSKDEFLTIL 121
Query: 94 RNGAQALIDLNPRVSK-------------LNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+N A + D + +++K +LTHCN G+LAT EYGTALGVIR H +N
Sbjct: 122 KNKADNIADSDRKINKKMAENGNTLIKDNAVILTHCNAGALATVEYGTALGVIREAHFSN 181
Query: 141 KIVDI 145
K + +
Sbjct: 182 KNIKV 186
>gi|432330546|ref|YP_007248689.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanoregula
formicicum SMSP]
gi|432137255|gb|AGB02182.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanoregula
formicicum SMSP]
Length = 347
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+ V + + + S RPTA+N+ D V +SL E ++ R I +D
Sbjct: 77 FTERVKQDAERIRSTRPTAINLGWGIDRVLASLEEARSREDAQSIAFREAGAIA---RED 133
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+ AIGRNG L D + VLTHCN G+LA + +GTALGVIRS A K
Sbjct: 134 TACCHAIGRNGGALLPD------RCTVLTHCNAGALACSSWGTALGVIRSAAEAGKDVKV 187
Query: 276 YCTETRPYNQGAR 288
ETRP QGAR
Sbjct: 188 IACETRPLLQGAR 200
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 52/181 (28%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------- 62
K L ++Q LLP ++++ +++ AI+ +++RGAPA+ + G G+ +
Sbjct: 13 KDCLCYIEQTLLPGEYRIIECRSIDRLATAIRRLEIRGAPALGVAGAYGVAIATLTAPEG 72
Query: 63 ---DIKDKQFPDNELIQ---------------LIESMLE--------------------K 84
++ D E I+ ++ S+ E +
Sbjct: 73 PFSGFTERVKQDAERIRSTRPTAINLGWGIDRVLASLEEARSREDAQSIAFREAGAIARE 132
Query: 85 DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVD 144
D + AIGRNG L D + VLTHCN G+LA + +GTALGVIRS A K V
Sbjct: 133 DTACCHAIGRNGGALLPD------RCTVLTHCNAGALACSSWGTALGVIRSAAEAGKDVK 186
Query: 145 I 145
+
Sbjct: 187 V 187
>gi|402904473|ref|XP_003915068.1| PREDICTED: methylthioribose-1-phosphate isomerase isoform 2
[Papio anubis]
Length = 322
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIK 65
+++
Sbjct: 62 ELQ 64
>gi|223478405|ref|YP_002582630.1| methylthioribose-1-phosphate isomerase [Thermococcus sp. AM4]
gi|214033631|gb|EEB74458.1| Methylthioribose-1-phosphate isomerase [Thermococcus sp. AM4]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A + +K + E A+ SP+ ++ ++ + + ++D+ N +G
Sbjct: 94 DLLKNTRPTAVNLFWALNRIKKLVEENAE-SPLEEIRKLIVAEAQRIADEDVEANLRMGH 152
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+AL + NVLTHCN GSLAT + GT V+R ++ + + ETRP
Sbjct: 153 YGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVMNKDGTLRLLWVDETRPVL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ YE + ++DQ LLP K +++ VE+ +AI +M+VRG
Sbjct: 15 RSVRYEPGKVIMIDQTLLPREFKTIELKTVEEVAEAIVTMKVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDI--KDKQFPDNELIQLI-- 78
A+ + L + + ++ + P E+ +LI
Sbjct: 75 DTSKARTKDEFMDGFYRAYDLLKNTRPTAVNLFWALNRIKKLVEENAESPLEEIRKLIVA 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+AL + NVLTHCN GSLAT + GT V+R +
Sbjct: 135 EAQRIADEDVEANLRMGHYGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVM 187
Query: 137 H 137
+
Sbjct: 188 N 188
>gi|27376072|ref|NP_767601.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium japonicum
USDA 110]
gi|27349211|dbj|BAC46226.1| blr0961 [Bradyrhizobium japonicum USDA 110]
Length = 368
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 161 GEKLDY--LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI--ESMLEKDI 216
G KL Y LV ARPTA+N+K A D ++++L+ P++ V+ + ++E+D+
Sbjct: 78 GLKLAYETLVVARPTAINLKWALDEMRATLA------PIDPVERAEAAYARADEIVEQDV 131
Query: 217 SDNKAIGRNG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
N+ I NG +A+ PG +NVLTHCN G LAT ++GTA I H
Sbjct: 132 EINRGIAANGLALIEAIAAKKPG-EVVNVLTHCNAGWLATVDWGTATAPIYLAHERGIKV 190
Query: 274 AAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 191 HVWVDETRPRNQGA 204
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K +SI E+ S+ +DQ LPH + + + EDA AI+ M VRGAP I G
Sbjct: 6 KHFRSIWRERDGWSVGAIDQRRLPHEFVVARLTSCEDAAVAIRDMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKDK-----------------------QFPDNELIQLI----------------ES 80
+ + +++ ++ +E+ + +
Sbjct: 66 MALAMREDASDAGLKLAYETLVVARPTAINLKWALDEMRATLAPIDPVERAEAAYARADE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++E+D+ N+ I NG +A+ P +NVLTHCN G LAT ++GTA I H
Sbjct: 126 IVEQDVEINRGIAANGLALIEAIAAKKPG-EVVNVLTHCNAGWLATVDWGTATAPIYLAH 184
>gi|15598365|ref|NP_251859.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PAO1]
gi|107102699|ref|ZP_01366617.1| hypothetical protein PaerPA_01003765 [Pseudomonas aeruginosa PACS2]
gi|116051158|ref|YP_790011.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890639|ref|YP_002439503.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
LESB58]
gi|254236131|ref|ZP_04929454.1| hypothetical protein PACG_02095 [Pseudomonas aeruginosa C3719]
gi|254241857|ref|ZP_04935179.1| hypothetical protein PA2G_02577 [Pseudomonas aeruginosa 2192]
gi|313108481|ref|ZP_07794485.1| putative initiation factor 2 subunit [Pseudomonas aeruginosa 39016]
gi|355641000|ref|ZP_09051987.1| methylthioribose-1-phosphate isomerase [Pseudomonas sp. 2_1_26]
gi|386057870|ref|YP_005974392.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa M18]
gi|386067187|ref|YP_005982491.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
NCGM2.S1]
gi|392983106|ref|YP_006481693.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa DK2]
gi|416863901|ref|ZP_11915389.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
138244]
gi|418585271|ref|ZP_13149325.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
MPAO1/P1]
gi|418591679|ref|ZP_13155572.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
MPAO1/P2]
gi|419752508|ref|ZP_14278915.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PADK2_CF510]
gi|420138988|ref|ZP_14646859.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
CIG1]
gi|421152917|ref|ZP_15612485.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
14886]
gi|421159447|ref|ZP_15618582.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
25324]
gi|421166691|ref|ZP_15624926.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
700888]
gi|421173639|ref|ZP_15631379.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
CI27]
gi|421179677|ref|ZP_15637257.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa E2]
gi|421517699|ref|ZP_15964373.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PAO579]
gi|424942539|ref|ZP_18358302.1| probable initiation factor 2 subunit [Pseudomonas aeruginosa
NCMG1179]
gi|451987914|ref|ZP_21936065.1| Methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa 18A]
gi|50401167|sp|Q9HZ65.1|MTNA_PSEAE RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|122260293|sp|Q02PX5.1|MTNA_PSEAB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|254813656|sp|B7V9J7.1|MTNA_PSEA8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|9949286|gb|AAG06557.1|AE004741_2 5-methylthioribose-1-phosphate isomerase MtnA [Pseudomonas
aeruginosa PAO1]
gi|115586379|gb|ABJ12394.1| putative initiation factor 2 subunit [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168062|gb|EAZ53573.1| hypothetical protein PACG_02095 [Pseudomonas aeruginosa C3719]
gi|126195235|gb|EAZ59298.1| hypothetical protein PA2G_02577 [Pseudomonas aeruginosa 2192]
gi|218770862|emb|CAW26627.1| probable initiation factor 2 subunit [Pseudomonas aeruginosa
LESB58]
gi|310880987|gb|EFQ39581.1| putative initiation factor 2 subunit [Pseudomonas aeruginosa 39016]
gi|334835212|gb|EGM14105.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
138244]
gi|346058985|dbj|GAA18868.1| probable initiation factor 2 subunit [Pseudomonas aeruginosa
NCMG1179]
gi|347304176|gb|AEO74290.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa M18]
gi|348035746|dbj|BAK91106.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
NCGM2.S1]
gi|354831026|gb|EHF15055.1| methylthioribose-1-phosphate isomerase [Pseudomonas sp. 2_1_26]
gi|375044691|gb|EHS37285.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
MPAO1/P1]
gi|375049489|gb|EHS41983.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
MPAO1/P2]
gi|384401048|gb|EIE47404.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PADK2_CF510]
gi|392318611|gb|AFM63991.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa DK2]
gi|403248265|gb|EJY61850.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
CIG1]
gi|404347181|gb|EJZ73530.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PAO579]
gi|404524595|gb|EKA34922.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
14886]
gi|404535568|gb|EKA45257.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
CI27]
gi|404537410|gb|EKA47012.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
700888]
gi|404546789|gb|EKA55828.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa E2]
gi|404547159|gb|EKA56173.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa ATCC
25324]
gi|451754461|emb|CCQ88588.1| Methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa 18A]
gi|453043070|gb|EME90804.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PA21_ST175]
Length = 358
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNK 220
E L +RPTAVN+ A + ++ L + P+ ++ I + ES D N
Sbjct: 87 EDFRLLADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHES----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ + G + LI G S N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 143 TMAQLGME-LIRKQQG-SPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 51/183 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L++LDQ LLP ++ + + +AI+ M VRGAPAI I G+V
Sbjct: 9 ERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKD---ISDNKAIGRNGAQALIDLNPRVSKL-------- 110
+ + + + + LE+D ++D++ N AL + R+ ++
Sbjct: 69 LGARARLAQGGDW----RAALEEDFRLLADSRPTAVNLFWALNRMRDRLERMKEGDQPLA 124
Query: 111 ------------------------------------NVLTHCNTGSLATAEYGTALGVIR 134
N+LTHCNTG+LAT +GTALGVIR
Sbjct: 125 VLEAEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIR 184
Query: 135 SLH 137
+ H
Sbjct: 185 AAH 187
>gi|254430048|ref|ZP_05043755.1| methylthioribose-1-phosphate isomerase [Alcanivorax sp. DG881]
gi|196196217|gb|EDX91176.1| methylthioribose-1-phosphate isomerase [Alcanivorax sp. DG881]
Length = 349
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ++RPTAVN+ A + ++ + N + L ES+ +D++ N+A+G G
Sbjct: 84 LAASRPTAVNLFWALERLQRVAGDLQG----NALCQALTDDAESIHREDLAANQAMGDFG 139
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L D V THCNTG+LAT +GTALG+IRS ++ Y ETRP+ QG
Sbjct: 140 ADLLPD------GATVYTHCNTGALATGGHGTALGIIRSAWARKQLSGVYAGETRPWLQG 193
Query: 287 AR 288
+R
Sbjct: 194 SR 195
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 79/197 (40%), Gaps = 61/197 (30%)
Query: 23 PHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD---------------- 66
P + +DI + + A AI+ M VRGAPAI I GL ++ +
Sbjct: 24 PTETLWLDILDSQQAADAIRDMVVRGAPAIGITAAYGLALEAQRLGESATLASLQSAIAC 83
Query: 67 ----------------------KQFPDNELIQLI----ESMLEKDISDNKAIGRNGAQAL 100
N L Q + ES+ +D++ N+A+G GA L
Sbjct: 84 LAASRPTAVNLFWALERLQRVAGDLQGNALCQALTDDAESIHREDLAANQAMGDFGADLL 143
Query: 101 IDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYV 160
D V THCNTG+LAT +GTALG+IRS ++ + Y
Sbjct: 144 PD------GATVYTHCNTGALATGGHGTALGIIRSAWARKQLSGV-------------YA 184
Query: 161 GEKLDYLVSARPTAVNM 177
GE +L +R T+ +
Sbjct: 185 GETRPWLQGSRLTSWEL 201
>gi|296388347|ref|ZP_06877822.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
PAb1]
gi|416882245|ref|ZP_11921826.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
152504]
gi|334835262|gb|EGM14150.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
152504]
Length = 358
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNK 220
E L +RPTAVN+ A + ++ L + P+ ++ I + ES D N
Sbjct: 87 EDFRQLADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHES----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ + G + LI G S N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 143 TMAQLGME-LIRKQQG-SPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L++LDQ LLP ++ + + +AI+ M VRGAPAI I G+V
Sbjct: 9 ERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ + + + +E + ++D++ N AL + R+ ++
Sbjct: 69 LGARARLAQGGDWRAALEEDF-RQLADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAH 187
>gi|254482981|ref|ZP_05096217.1| methylthioribose-1-phosphate isomerase [marine gamma
proteobacterium HTCC2148]
gi|214036853|gb|EEB77524.1| methylthioribose-1-phosphate isomerase [marine gamma
proteobacterium HTCC2148]
Length = 357
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
+++I+DQ LLPHT V ++++E AI MQVRGAP I I GL + + N
Sbjct: 18 AVEIIDQTLLPHTLHWVHLDSLEAYCHAISVMQVRGAPLIGITAAFGLAHAVAENPSDTN 77
Query: 73 ---------------------------ELIQLIE------------SMLEKDISDNKAIG 93
L L+E +M + DI + IG
Sbjct: 78 LVAASASLMATRPTAVNLRWALETMERHLCSLVEGDRAVAARQQAIAMRQADIDNCALIG 137
Query: 94 RNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
NG L D+ P LN++THCN G LAT ++GTAL I A V +
Sbjct: 138 ENGLGLLRDI-PHGETLNIMTHCNAGWLATIQWGTALAPIYKAQAAGLPVHV 188
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L++ RPTAVN++ A ++++ L + + + I +M + DI + IG NG
Sbjct: 85 LMATRPTAVNLRWALETMERHLCSLVEGDRAVAARQQAI----AMRQADIDNCALIGENG 140
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L D+ P LN++THCN G LAT ++GTAL I A + +ETRP NQG
Sbjct: 141 LGLLRDI-PHGETLNIMTHCNAGWLATIQWGTALAPIYKAQAAGLPVHVWVSETRPRNQG 199
>gi|414075644|ref|YP_006994962.1| methyl-5-thioribose-1-phosphate isomerase [Anabaena sp. 90]
gi|413969060|gb|AFW93149.1| methyl-5-thioribose-1-phosphate isomerase [Anabaena sp. 90]
Length = 345
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + + E V +K L++ + + +D+ +AIG +G
Sbjct: 84 LRSTRPTAVNLFWAIGRMMKTAYE--TVGTVAEIKQVLLETAQKINAEDLQTCQAIGDHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
AL P +L +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 142 LAALPQ-TP--DQLIILTHCNAGALATAGYGTALGVVRSAWKEGRLARVFADETRPRLQG 198
Query: 287 AR 288
A+
Sbjct: 199 AK 200
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 85/177 (48%), Gaps = 52/177 (29%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ +S+ ++DQ LP+ +V+I+ ED QAI +M VRGAPAI + G+ + ++
Sbjct: 5 VIWRNNSVSLIDQTRLPNEYTVVEIHRSEDMAQAITTMIVRGAPAIGVAAAYGMYLGARE 64
Query: 67 KQFPD-NELIQLIES---------------------------------------MLE--- 83
+ + E + +E+ +LE
Sbjct: 65 IETSEIQEFLTKLETVANLLRSTRPTAVNLFWAIGRMMKTAYETVGTVAEIKQVLLETAQ 124
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVS-KLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ +AIG +G AL P+ +L +LTHCN G+LATA YGTALGV+RS
Sbjct: 125 KINAEDLQTCQAIGDHGLAAL----PQTPDQLIILTHCNAGALATAGYGTALGVVRS 177
>gi|258543328|ref|YP_003188761.1| methylthioribose-1-phosphate isomerase [Acetobacter pasteurianus
IFO 3283-01]
gi|384043248|ref|YP_005481992.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-12]
gi|384051765|ref|YP_005478828.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|384054872|ref|YP_005487966.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|384058107|ref|YP_005490774.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|384060748|ref|YP_005499876.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|384064040|ref|YP_005484682.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|384120051|ref|YP_005502675.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256634406|dbj|BAI00382.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256637464|dbj|BAI03433.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-03]
gi|256640516|dbj|BAI06478.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-07]
gi|256643573|dbj|BAI09528.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-22]
gi|256646628|dbj|BAI12576.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-26]
gi|256649681|dbj|BAI15622.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-32]
gi|256652669|dbj|BAI18603.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256655725|dbj|BAI21652.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
pasteurianus IFO 3283-12]
Length = 376
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 42/170 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---- 65
++ S+ I DQ LP + ++ + V+D AI SMQVRGAP I V GL + ++
Sbjct: 28 DQWSIHIFDQTRLPFSLDILRLTTVQDVAHAITSMQVRGAPLIGAVAAYGLALALRTDNS 87
Query: 66 DKQFPDN------------ELIQLIESML-----------------------EKDISDNK 90
D N L +E ML ++D + N+
Sbjct: 88 DTSLEQNAAMLAATRPTAINLRWALERMLNTLRPIPPENRVSAAYAEALHICDEDAAQNE 147
Query: 91 AIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
AIG++G + L DL + +LN+LTHCN G +AT ++GTAL I H
Sbjct: 148 AIGKHGLKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAH 197
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N++ A + + ++L P N V + + + ++D + N+AIG++G
Sbjct: 98 LAATRPTAINLRWALERMLNTLR---PIPPENRVSAAYAEALH-ICDEDAAQNEAIGKHG 153
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ L DL +LN+LTHCN G +AT ++GTAL I H + ETRP
Sbjct: 154 LKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAHDLGLNVHVWVDETRPR 213
Query: 284 NQGA 287
NQGA
Sbjct: 214 NQGA 217
>gi|257076608|ref|ZP_05570969.1| translation initiation factor IF-2B subunit alpha [Ferroplasma
acidarmanus fer1]
Length = 338
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 85/162 (52%), Gaps = 24/162 (14%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K++ ++ +E++ +K++DQ +P T ++ N +D Y AIK+M VRGAPAI + GL
Sbjct: 10 KAILAVWFEENQVKLIDQRKIPETIEIYSAKNSDDIYYAIKNMVVRGAPAIGVTAAYGLA 69
Query: 62 VDIKDKQFPDN-------------ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS 108
+ K+ + + +L + I+ M + S++ A R A + + + ++
Sbjct: 70 MASKNMEDMEKAVKTISSSRPTAYDLFKAIDFMKANNFSESAA--RRYALEITERSRKIG 127
Query: 109 KL---------NVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+ ++LTHCN G+LA ++GTAL +R H + K
Sbjct: 128 EYGNTLIQANDHILTHCNAGALAVVDWGTALAPMRIAHDSGK 169
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
Query: 169 SARPTAVNMKRAADSVKSS-LSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGA 227
S+RPTA ++ +A D +K++ SE A + +++ E ++ IG G
Sbjct: 87 SSRPTAYDLFKAIDFMKANNFSESA-------ARRYALEITER--------SRKIGEYG- 130
Query: 228 QALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
LI N ++LTHCN G+LA ++GTAL +R H + K Y ETRP QGA
Sbjct: 131 NTLIQAND-----HILTHCNAGALAVVDWGTALAPMRIAHDSGKKIFVYVDETRPRLQGA 185
Query: 288 R 288
+
Sbjct: 186 K 186
>gi|384214697|ref|YP_005605861.1| translation initiation factor [Bradyrhizobium japonicum USDA 6]
gi|354953594|dbj|BAL06273.1| translation initiation factor [Bradyrhizobium japonicum USDA 6]
Length = 369
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 30/171 (17%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG AL + DS + + D LV ARPTA+N+K A
Sbjct: 60 ATAAYGMALAM-------------------REDSSDAGLKRAYDTLVVARPTAINLKWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLI--ESMLEKDISDNKAIGRNG---AQALIDLNPG 236
D ++++L+ PV+ V+ + ++E+D+ N+ I NG +A++
Sbjct: 101 DEMRTALT------PVDPVERAEAAYARADEIVEQDVEINRGIAGNGLKLIEAIVAKKKP 154
Query: 237 VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+NVLTHCN G LAT ++GTA I H + ETRP NQGA
Sbjct: 155 GETVNVLTHCNAGWLATVDWGTATAPIYLAHERGIKVHVWVDETRPRNQGA 205
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 44/180 (24%)
Query: 2 KSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K +SI E+ S+ +DQ LPH + + + EDA AI+ M VRGAP I G
Sbjct: 6 KHFRSIWRERDGWSVGAIDQRRLPHEFVVAKLTSCEDAAVAIRDMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKD-------KQFPDNELI--------------------------------QLIES 80
+ + +++ K+ D ++ +
Sbjct: 66 MALAMREDSSDAGLKRAYDTLVVARPTAINLKWALDEMRTALTPVDPVERAEAAYARADE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++E+D+ N+ I NG +A++ +NVLTHCN G LAT ++GTA I H
Sbjct: 126 IVEQDVEINRGIAGNGLKLIEAIVAKKKPGETVNVLTHCNAGWLATVDWGTATAPIYLAH 185
>gi|159898870|ref|YP_001545117.1| aIF-2BI family translation initiation factor [Herpetosiphon
aurantiacus DSM 785]
gi|159891909|gb|ABX04989.1| putative translation initiation factor, aIF-2BI family
[Herpetosiphon aurantiacus DSM 785]
Length = 358
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 123 TAEYGTALGVIRSL-HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
TA YG AL RS ++K+ LEK K L + RPTA+N+ A
Sbjct: 58 TAAYGMALAAQRSTAQTSSKL-------------LEKLAKAKA-LLDATRPTAINLAWAT 103
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ +++ V+ ++ RL+ E++ ++D + +AIG++G L N
Sbjct: 104 QRMLD-VAQANHTLEVDQLRQRLLAEAEAIRDQDEAMCRAIGQHGKVLL------AQSRN 156
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G LATA YGTAL IR++H + + ETRP+ QGAR
Sbjct: 157 VLTHCNAGGLATAAYGTALAPIRAVHEDGQPIHVWVDETRPFLQGAR 203
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 67/213 (31%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---------- 65
++DQ LLP T +V ++ +AI+SMQVRGAPAI I G+ + +
Sbjct: 19 LIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAAYGMALAAQRSTAQTSSKL 78
Query: 66 -----------DKQFPD---------------------------NELIQLIESMLEKDIS 87
D P L+ E++ ++D +
Sbjct: 79 LEKLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQLRQRLLAEAEAIRDQDEA 138
Query: 88 DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKD 147
+AIG++G L NVLTHCN G LATA YGTAL IR++H
Sbjct: 139 MCRAIGQHGKVLL------AQSRNVLTHCNAGGLATAAYGTALAPIRAVH---------- 182
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
D + +V E +L AR TA +++A
Sbjct: 183 ---EDGQPIHVWVDETRPFLQGARLTAWELQQA 212
>gi|312111902|ref|YP_003990218.1| translation initiation factor, aIF-2BI family [Geobacillus sp.
Y4.1MC1]
gi|311217003|gb|ADP75607.1| translation initiation factor, aIF-2BI family [Geobacillus sp.
Y4.1MC1]
Length = 356
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 15/138 (10%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
++ ++YV + DYL S+RPTAVN+ A D + SS+ A A VN KT LI +
Sbjct: 77 ETFKEYVRKDRDYLASSRPTAVNLFWALDRLVSSI---AHAFSVNEAKTTLIH---EAIR 130
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
I D R G AL G +LT CN GS+ATA YGTAL + A + G
Sbjct: 131 IQIEDEDVCRRIGEHALSLFQNGD---RILTICNAGSIATARYGTALA---PFYLAKEKG 184
Query: 274 A---AYCTETRPYNQGAR 288
Y +ETRP QGAR
Sbjct: 185 IHLHVYASETRPVLQGAR 202
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 69/170 (40%), Gaps = 46/170 (27%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+S+ + + IL+Q LP ++ + + ++ED ++AI +++VRGAPAI I GL +
Sbjct: 9 RSVEWNDTHITILNQQKLPLVTEYLQLKDIEDVWEAIATLKVRGAPAIGITAAYGLALAA 68
Query: 65 ----------------KDKQ--------------------------FPDNEL-IQLIESM 81
KD+ F NE LI
Sbjct: 69 QRYETESLETFKEYVRKDRDYLASSRPTAVNLFWALDRLVSSIAHAFSVNEAKTTLIHEA 128
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ I D R G AL + +LT CN GS+ATA YGTAL
Sbjct: 129 IRIQIEDEDVCRRIGEHALSLFQ---NGDRILTICNAGSIATARYGTALA 175
>gi|332158993|ref|YP_004424272.1| translation initiation factor IF-2B subunit beta [Pyrococcus sp.
NA2]
gi|331034456|gb|AEC52268.1| translation initiation factor IF-2B subunit beta [Pyrococcus sp.
NA2]
Length = 359
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + +K L E K P+ +K +++ + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIKR-LVEEHKEDPLEEIKKLIVKEARKIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + N+LTHCN GSLAT GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNILTHCNAGSLATVHLGTVGAVVRVMHKEGTLKLLWLDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ Y ++ +++Q LLP K+ VE+ +AIK+M VRG
Sbjct: 15 RSVEYRDKAVYMINQRLLPREFKVEAFKTVEEVAEAIKNMTVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDI--KDKQFPDNELIQLI-- 78
A+ + L + + + K+ P E+ +LI
Sbjct: 75 ETSKAKTKEEFFEGLERAYETLKNTRPTAVNLFWALNRIKRLVEEHKEDPLEEIKKLIVK 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ ++D+ N +G GA+ L + N+LTHCN GSLAT GT V+R +
Sbjct: 135 EARKIADEDVEANLRMGHYGAEVL-------PEGNILTHCNAGSLATVHLGTVGAVVRVM 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|319790486|ref|YP_004152119.1| translation initiation factor, aIF-2BI family [Thermovibrio
ammonificans HB-1]
gi|317114988|gb|ADU97478.1| translation initiation factor, aIF-2BI family [Thermovibrio
ammonificans HB-1]
Length = 352
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 67/227 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
+K ++ + + +L +LDQ LP + V+ + E +AI+ M VRGAPAI +V G+
Sbjct: 4 IKDIRPLKWTGEALLLLDQRKLPLKEEWVECKDYECVARAIEQMVVRGAPAIGVVAAYGV 63
Query: 61 VVDIKD-----KQFPD---------------------------------------NELIQ 76
V+ K+ K + D E++
Sbjct: 64 VLGAKEMAEKTKGYLDFKAKVELIINRLAATRPTAVNLFWALKRMRRIVEAGTDIEEIVV 123
Query: 77 LIES----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+E+ + +D+ N+ IG GA+ L S+ +LTHCNTG+LATA YGTALGV
Sbjct: 124 ALETEAINIERQDVETNRKIGYYGAELL------SSREVILTHCNTGALATAGYGTALGV 177
Query: 133 IRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+R+ K + + +V E YL AR TA +++
Sbjct: 178 VRAAVEMGKDITV-------------FVDETRPYLQGARLTAWELQQ 211
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG +D K K V ++ L + RPTAVN+ A
Sbjct: 59 AAYGVVLGAKEMAEKTKGYLDFKAK-----------VELIINRLAATRPTAVNLFWALKR 107
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
++ + + + + L ++ +D+ N+ IG GA+ L S+ +L
Sbjct: 108 MRRIVE---AGTDIEEIVVALETEAINIERQDVETNRKIGYYGAELL------SSREVIL 158
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCNTG+LATA YGTALGV+R+ K + ETRPY QGAR
Sbjct: 159 THCNTGALATAGYGTALGVVRAAVEMGKDITVFVDETRPYLQGAR 203
>gi|421852564|ref|ZP_16285251.1| translation initiation factor alpha subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479241|dbj|GAB30454.1| translation initiation factor alpha subunit [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 376
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 78/170 (45%), Gaps = 42/170 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---- 65
++ S+ I DQ LP + ++ + V+D AI SMQVRGAP I V GL + ++
Sbjct: 28 DQWSIHIFDQTRLPFSLDILRLTTVQDVAHAITSMQVRGAPLIGAVAAYGLALALRTDNS 87
Query: 66 DKQFPDN------------ELIQLIESML-----------------------EKDISDNK 90
D N L +E ML ++D + N+
Sbjct: 88 DTSLEQNAAMLAATRPTAINLRWALERMLNTLRPIPPENRVSAAYAEALHICDEDAAQNE 147
Query: 91 AIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
AIG++G + L DL + +LN+LTHCN G +AT ++GTAL I H
Sbjct: 148 AIGKHGLKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAH 197
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N++ A + + ++L P N V + + + ++D + N+AIG++G
Sbjct: 98 LAATRPTAINLRWALERMLNTLR---PIPPENRVSAAYAEALH-ICDEDAAQNEAIGKHG 153
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ L DL +LN+LTHCN G +AT ++GTAL I H + ETRP
Sbjct: 154 LKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAHDLGLNVHVWVDETRPR 213
Query: 284 NQGA 287
NQGA
Sbjct: 214 NQGA 217
>gi|54026517|ref|YP_120759.1| initiation factor eIF-2B subunit alpha-like protein [Nocardia
farcinica IFM 10152]
gi|81373490|sp|Q5YQZ6.1|MTNAB_NOCFA RecName: Full=Probable bifunctional methylthioribose-1-phosphate
isomerase/methylthioribulose-1-phosphate dehydratase;
Includes: RecName: Full=Methylthioribose-1-phosphate
isomerase; Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
Includes: RecName: Full=Methylthioribulose-1-phosphate
dehydratase; Short=MTRu-1-P dehydratase
gi|54018025|dbj|BAD59395.1| putative initiation factor eIF-2B alpha subunit homolog [Nocardia
farcinica IFM 10152]
Length = 552
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V + D + +ARPTAVN+ A D V+ ++E A A T+ ML +D N
Sbjct: 80 VRAEADRIAAARPTAVNLAWAVDRVRPRIAEGADAVLAETLD---------MLAEDGRVN 130
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+A + A L+ G L VLTHCNTG LAT+ +GTA+G +R L + E
Sbjct: 131 RAAATHAAD-LVQRLCGPRPLRVLTHCNTGRLATSAFGTAIGALRVLAERGAVEEVLVDE 189
Query: 280 TRPYNQGAR 288
TRP QGAR
Sbjct: 190 TRPLLQGAR 198
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 44/173 (25%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV--- 61
S+ ++ +L +DQ LPH ++ + + + AIK++ +RGAPAI I G +V
Sbjct: 7 SSLTWDDGALVTVDQRGLPHEARPLRLRTADQIIDAIKTLAIRGAPAIGIAGAFAVVLAT 66
Query: 62 --------VDIK-----------------------DKQFP------DNELIQLIESMLEK 84
VD+ D+ P D L + ++ ML +
Sbjct: 67 RAHTRDGIVDVAAVRAEADRIAAARPTAVNLAWAVDRVRPRIAEGADAVLAETLD-MLAE 125
Query: 85 DISDNKAIGRNGAQALIDL-NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
D N+A + A + L PR L VLTHCNTG LAT+ +GTA+G +R L
Sbjct: 126 DGRVNRAAATHAADLVQRLCGPR--PLRVLTHCNTGRLATSAFGTAIGALRVL 176
>gi|384439283|ref|YP_005654007.1| Translation initiation factor, aIF-2BI [Thermus sp. CCB_US3_UF1]
gi|359290416|gb|AEV15933.1| Translation initiation factor, aIF-2BI [Thermus sp. CCB_US3_UF1]
Length = 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 37/190 (19%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNE 73
+LDQ LP V + + + +AI++M VRGAPAI + G+V+ + + P+ E
Sbjct: 16 FWLLDQRRLPLEEVWVPVRSAREMAEAIRAMVVRGAPAIGVAAAFGMVLAHRAGEDPE-E 74
Query: 74 LIQLIESMLEKDISDNKAIGR------------NGAQAL----------IDLN-PRVSKL 110
+L+ ++ A+ R AQAL I L+ RV +
Sbjct: 75 ADRLLRQSRPTAVNLFHALDRLRPFWGDAKGSLEAAQALWREVEETERAISLHGARVLRG 134
Query: 111 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSA 170
VLTHCNTG LAT YGTALG I H ++ + +V E YL A
Sbjct: 135 QVLTHCNTGPLATGGYGTALGAIVEAHRQGRVAHV-------------WVDETRPYLQGA 181
Query: 171 RPTAVNMKRA 180
R TA + RA
Sbjct: 182 RLTAFELLRA 191
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 162 EKLDYLV-SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNK 220
E+ D L+ +RPTAVN+ A D ++ + AK S ++ +++ + +
Sbjct: 73 EEADRLLRQSRPTAVNLFHALDRLRPFWGD-AKGS---------LEAAQALWREVEETER 122
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
AI +GA+ L + VLTHCNTG LAT YGTALG I H ++ + ET
Sbjct: 123 AISLHGARVL--------RGQVLTHCNTGPLATGGYGTALGAIVEAHRQGRVAHVWVDET 174
Query: 281 RPYNQGAR 288
RPY QGAR
Sbjct: 175 RPYLQGAR 182
>gi|57640491|ref|YP_182969.1| translation initiation factor IF-2 [Thermococcus kodakarensis KOD1]
gi|57158815|dbj|BAD84745.1| translation initiation factor eIF-2B, beta subunit [Thermococcus
kodakarensis KOD1]
Length = 356
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + VKS + E + P++ +K ++ + + +D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRVKSLVEEHLE-DPLDEIKRLIVAEAQKIANEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + NVLTHCN GSLAT + GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVMHRDGTLKLLWVDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ YE + ++DQ LLP + +++ V++ +AI +M+VRG
Sbjct: 15 RSVRYEPGRVTMIDQTLLPREFREIELRTVDEVAEAIITMKVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQFPD--NELIQLIES 80
A+ + L V + ++ D +E+ +LI +
Sbjct: 75 DTSNARTKEEFMDGFERAYERLKNTRPTAVNLFWALNRVKSLVEEHLEDPLDEIKRLIVA 134
Query: 81 MLEK----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+K D+ N +G GA+ L + NVLTHCN GSLAT + GT V+R +
Sbjct: 135 EAQKIANEDVEANLRMGHYGAEVL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVM 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|218526892|sp|A9AYL1.2|MTNA_HERA2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
Length = 355
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 85/167 (50%), Gaps = 22/167 (13%)
Query: 123 TAEYGTALGVIRSL-HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
TA YG AL RS ++K+ LEK K L + RPTA+N+ A
Sbjct: 55 TAAYGMALAAQRSTAQTSSKL-------------LEKLAKAKA-LLDATRPTAINLAWAT 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
+ +++ V+ ++ RL+ E++ ++D + +AIG++G L N
Sbjct: 101 QRMLD-VAQANHTLEVDQLRQRLLAEAEAIRDQDEAMCRAIGQHGKVLL------AQSRN 153
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
VLTHCN G LATA YGTAL IR++H + + ETRP+ QGAR
Sbjct: 154 VLTHCNAGGLATAAYGTALAPIRAVHEDGQPIHVWVDETRPFLQGAR 200
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 87/213 (40%), Gaps = 67/213 (31%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---------- 65
++DQ LLP T +V ++ +AI+SMQVRGAPAI I G+ + +
Sbjct: 16 LIDQRLLPATLDIVRCEDLNSVIEAIRSMQVRGAPAIGITAAYGMALAAQRSTAQTSSKL 75
Query: 66 -----------DKQFPD---------------------------NELIQLIESMLEKDIS 87
D P L+ E++ ++D +
Sbjct: 76 LEKLAKAKALLDATRPTAINLAWATQRMLDVAQANHTLEVDQLRQRLLAEAEAIRDQDEA 135
Query: 88 DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKD 147
+AIG++G L NVLTHCN G LATA YGTAL IR++H
Sbjct: 136 MCRAIGQHGKVLL------AQSRNVLTHCNAGGLATAAYGTALAPIRAVH---------- 179
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
D + +V E +L AR TA +++A
Sbjct: 180 ---EDGQPIHVWVDETRPFLQGARLTAWELQQA 209
>gi|46199015|ref|YP_004682.1| translation initiation factor aIF-2B alpha subunit [Thermus
thermophilus HB27]
gi|81405949|sp|Q72JR1.1|MTNA_THET2 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|46196639|gb|AAS81055.1| translation initiation factor aIF-2B alpha subunit [Thermus
thermophilus HB27]
Length = 330
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 95/218 (43%), Gaps = 54/218 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------D 63
E+ +LDQ LP V + + QAI+ M VRGAPAI + G+V+ D
Sbjct: 12 EEGVFWLLDQRRLPQEEVYVPVRTAREMAQAIRDMVVRGAPAIGVSAAFGMVLAHLAGED 71
Query: 64 IKD----------------------KQFPDNELIQLIESM-LEKDISDNKA-IGRNGAQA 99
+++ + F + L+E+ + +++ + +A I R+GAQ
Sbjct: 72 LEEADRRLRASRPTAVNLFHALDRMRPFWGDLAGSLLEARRIWREVEETEAAISRHGAQI 131
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKY 159
L VLTHCNTG LAT YGTALG I + ++ + +
Sbjct: 132 LWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHV-------------W 170
Query: 160 VGEKLDYLVSARPTAVNMKRA---ADSVKSSLSEWAKA 194
V E YL AR TA +++A A + S++ W A
Sbjct: 171 VDETRPYLQGARLTAYELQKAGVPATLITDSMAGWLMA 208
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM-LEKDISDNKA-IGR 224
L ++RPTAVN+ A D ++ + A + L+E+ + +++ + +A I R
Sbjct: 79 LRASRPTAVNLFHALDRMRPFWGDLAGS------------LLEARRIWREVEETEAAISR 126
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+GAQ L VLTHCNTG LAT YGTALG I + ++ + ETRPY
Sbjct: 127 HGAQILWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHVWVDETRPYL 178
Query: 285 QGAR 288
QGAR
Sbjct: 179 QGAR 182
>gi|282896251|ref|ZP_06304273.1| Putative translation initiation factor, aIF-2BI [Raphidiopsis
brookii D9]
gi|281198747|gb|EFA73626.1| Putative translation initiation factor, aIF-2BI [Raphidiopsis
brookii D9]
Length = 341
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 52/180 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L +I++ +S+ ++DQ LP+ L++I+ +D +AI++M VRGAPAI + G+ +
Sbjct: 2 LYPVIWKNNSVLLIDQTRLPNEYALIEIHRSQDMAEAIRTMIVRGAPAIGVAAAYGMYLG 61
Query: 64 IKDKQFPD-----------------------------------------------NELIQ 76
++ + + L++
Sbjct: 62 AREIETNNRLEFLHELEGVAQVLRSTRPTAVNLFWAIGRMMQIAYETLGNIEEIKQNLLE 121
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRS 135
E + +D+ + IG NG + L P+ KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 122 TAEKIRAEDLETCQLIGDNGLKVL----PKTPEKLIILTHCNAGALATAGYGTALGVVRS 177
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A + E + +K L++ E + +D+ + IG NG
Sbjct: 84 LRSTRPTAVNLFWAIGRMMQIAYE--TLGNIEEIKQNLLETAEKIRAEDLETCQLIGDNG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L KL +LTHCN G+LATA YGTALGV+RS ++ + ETRP QG
Sbjct: 142 LKVLPKTP---EKLIILTHCNAGALATAGYGTALGVVRSAWKEGRLTRVFADETRPRLQG 198
Query: 287 AR 288
A+
Sbjct: 199 AK 200
>gi|23943880|ref|NP_115661.1| methylthioribose-1-phosphate isomerase isoform 2 [Homo sapiens]
gi|21739849|emb|CAD38951.1| hypothetical protein [Homo sapiens]
gi|117645272|emb|CAL38102.1| hypothetical protein [synthetic construct]
gi|117646758|emb|CAL37494.1| hypothetical protein [synthetic construct]
gi|119604777|gb|EAW84371.1| hypothetical protein MGC3207, isoform CRA_c [Homo sapiens]
gi|261859644|dbj|BAI46344.1| methylthioribose-1-phosphate isomerase homolog [synthetic
construct]
Length = 322
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y + SL+ILDQLLLP S+ + +V A++AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIK 65
+++
Sbjct: 62 ELQ 64
>gi|357419707|ref|YP_004932699.1| methylthioribose-1-phosphate isomerase [Thermovirga lienii DSM
17291]
gi|355397173|gb|AER66602.1| methylthioribose-1-phosphate isomerase [Thermovirga lienii DSM
17291]
Length = 336
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 162 EKLDYLVSARPTAVN-------MKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
E L L RPTAVN M++ A+ K +L + RL+ + +
Sbjct: 74 ESLSRLARTRPTAVNLFWALNRMEKVAEGTKEAL-----------LGERLLTEARQIHFE 122
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
DI N+ IG NGA+ L D + V+THCN G+LAT YGTALG+IR+ K
Sbjct: 123 DIEINRRIGINGAKLLPDTS------IVITHCNAGALATGGYGTALGIIRAAKEQGKNIK 176
Query: 275 AYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 177 VYVDETRPVLQGAR 190
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 89/201 (44%), Gaps = 56/201 (27%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD-------IKD 66
L+ILDQ LP + + VED +AI++M VRGAPAI I G+V+ +K+
Sbjct: 15 LEILDQRRLPREVSYLRCSTVEDVARAIETMAVRGAPAIGIAAAYGVVLTNPMTHDALKE 74
Query: 67 ------KQFPD--------NELIQLIESMLE----------------KDISDNKAIGRNG 96
+ P N + ++ E E +DI N+ IG NG
Sbjct: 75 SLSRLARTRPTAVNLFWALNRMEKVAEGTKEALLGERLLTEARQIHFEDIEINRRIGING 134
Query: 97 AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSL 156
A+ L D + V+THCN G+LAT YGTALG+IR+ K + +
Sbjct: 135 AKLLPDTS------IVITHCNAGALATGGYGTALGIIRAAKEQGKNIKV----------- 177
Query: 157 EKYVGEKLDYLVSARPTAVNM 177
YV E L AR TA +
Sbjct: 178 --YVDETRPVLQGARLTAWEL 196
>gi|14590581|ref|NP_142649.1| translation initiation factor IF-2 [Pyrococcus horikoshii OT3]
gi|11132111|sp|O58433.1|MTNA_PYRHO RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|3257110|dbj|BAA29793.1| 364aa long hypothetical translation initiation factor eIF-2 beta
chain [Pyrococcus horikoshii OT3]
Length = 364
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + +K + E ++ P++ +K ++Q + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIKKLVEEHSE-DPLDEIKRLIVQEAYKIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + N+LTHCN GSLAT GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNILTHCNAGSLATVHLGTVGSVVRVMHKDGSLKLLWLDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+++ Y+ S+ +++Q LLP K+ + VE+ +AIK+M VRG
Sbjct: 15 RTVEYKNKSVYMINQRLLPKEFKVEKFSKVEEVAEAIKNMTVRGAPAIGAAAGFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQFPD--NELIQLI-- 78
A+ + L + + ++ D +E+ +LI
Sbjct: 75 ETSKAKTKEEFLDGFEKAYEILKNTRPTAVNLFWALNRIKKLVEEHSEDPLDEIKRLIVQ 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ ++D+ N +G GA+ L + N+LTHCN GSLAT GT V+R +
Sbjct: 135 EAYKIADEDVEANLRMGHYGAEVL-------PEGNILTHCNAGSLATVHLGTVGSVVRVM 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|329115432|ref|ZP_08244181.1| Methylthioribose-1-phosphate isomerase [Acetobacter pomorum DM001]
gi|326695210|gb|EGE46902.1| Methylthioribose-1-phosphate isomerase [Acetobacter pomorum DM001]
Length = 365
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 74/167 (44%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV----DIKDKQ 68
S+ I DQ LP + ++ + V+D AI SMQVRGAP I V GL + D D
Sbjct: 20 SIHIFDQTRLPFSLDILRLTTVQDVAHAITSMQVRGAPLIGAVAAYGLALALRTDSSDTS 79
Query: 69 FPDN------------ELIQLIESMLE-----------------------KDISDNKAIG 93
N L +E ML +D + N+AIG
Sbjct: 80 LEQNATMLAATRPTAINLRWALERMLNTLRPIPPENRVSAAYAEALRICNEDAAQNEAIG 139
Query: 94 RNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGTALGVIRSLH 137
++G + L DL + K LN+LTHCN G +AT ++GTAL I H
Sbjct: 140 KHGLKLLQDLAAKKEKGQRLNILTHCNAGWIATVDWGTALAPIYMAH 186
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 7/137 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
DS + + + L + RPTA+N++ A + + ++L P N V + + +
Sbjct: 74 DSSDTSLEQNATMLAATRPTAINLRWALERMLNTLR---PIPPENRVSAAYAEALR-ICN 129
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSK---LNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+D + N+AIG++G + L DL K LN+LTHCN G +AT ++GTAL I H
Sbjct: 130 EDAAQNEAIGKHGLKLLQDLAAKKEKGQRLNILTHCNAGWIATVDWGTALAPIYMAHDLG 189
Query: 271 KIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 190 LNVHVWVDETRPRNQGA 206
>gi|376294860|ref|YP_005166090.1| translation initiation factor, aIF-2BI family [Desulfovibrio
desulfuricans ND132]
gi|323457421|gb|EGB13286.1| translation initiation factor, aIF-2BI family [Desulfovibrio
desulfuricans ND132]
Length = 346
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 163 KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAI 222
KLD + ARPTAVN++ A ++ E S ++ + ++ + DI + I
Sbjct: 81 KLDQIHDARPTAVNLRWAVREMRRIWDEAGDVS-LDELLALWLKRAREIQADDIEMCELI 139
Query: 223 GRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRP 282
GR G ALID V+THCN G+LATA YGTALGVIR K + ETRP
Sbjct: 140 GRFGG-ALID-----DGDTVMTHCNAGALATAGYGTALGVIRGAIDQGKKVSVIANETRP 193
Query: 283 YNQGAR 288
+ QGAR
Sbjct: 194 FLQGAR 199
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 72/173 (41%), Gaps = 53/173 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
EK +L +LDQ LP+ + + +D A+ M VRGAPAI + G + ++ Q
Sbjct: 10 EKDALILLDQRYLPNREEWFECRTTDDICYALVVMVVRGAPAIGVTAAYGCYLAGREVQG 69
Query: 70 PDNE----------------------------------------LIQLIESMLEK----- 84
D + L +L+ L++
Sbjct: 70 MDGDWKANLSAKLDQIHDARPTAVNLRWAVREMRRIWDEAGDVSLDELLALWLKRAREIQ 129
Query: 85 --DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
DI + IGR G ALID V+THCN G+LATA YGTALGVIR
Sbjct: 130 ADDIEMCELIGRFGG-ALID-----DGDTVMTHCNAGALATAGYGTALGVIRG 176
>gi|217967318|ref|YP_002352824.1| translation initiation factor, aIF-2BI family [Dictyoglomus
turgidum DSM 6724]
gi|217336417|gb|ACK42210.1| translation initiation factor, aIF-2BI family [Dictyoglomus
turgidum DSM 6724]
Length = 344
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
+L YV E + +RPTAVN+ A + + ++ SP + +K L++ + + +
Sbjct: 68 NLADYVHEVIGEFAVSRPTAVNLFFAIERMAKVVNSNKNLSP-SELKILLLEEAKKIENE 126
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
+ + AI GA+ L D GV VLTHCNTGSLAT GTALG+I+ KI
Sbjct: 127 EREKSIAISNFGAEILPD---GVK---VLTHCNTGSLATIGPGTALGIIKEGWKRGKISH 180
Query: 275 AYCTETRPYNQGAR 288
Y TETRP QGAR
Sbjct: 181 VYFTETRPLLQGAR 194
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 75/185 (40%), Gaps = 53/185 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+ I ++ + L ILDQ LP + + AIK M++RGAPAI + G+ +
Sbjct: 1 MNPIEWKNNILYILDQTKLPWKEDYILCFKYQQVIDAIKKMKIRGAPAIGVAAAYGITLA 60
Query: 63 -------DIKDK------QFPDNE-----LIQLIESMLEKDISDNK-------------- 90
++ D +F + L IE M K ++ NK
Sbjct: 61 AIKYTGSNLADYVHEVIGEFAVSRPTAVNLFFAIERM-AKVVNSNKNLSPSELKILLLEE 119
Query: 91 -------------AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
AI GA+ L D + VLTHCNTGSLAT GTALG+I+
Sbjct: 120 AKKIENEEREKSIAISNFGAEILPD------GVKVLTHCNTGSLATIGPGTALGIIKEGW 173
Query: 138 GANKI 142
KI
Sbjct: 174 KRGKI 178
>gi|303228989|ref|ZP_07315799.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
ACS-134-V-Col7a]
gi|302516403|gb|EFL58335.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella atypica
ACS-134-V-Col7a]
Length = 352
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 18/161 (11%)
Query: 131 GVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSE 190
G+I + AN++ P ++ L + E + L RPTA+N+ A + + + +
Sbjct: 56 GLILAAEEANRLA------VPFSEQLSAFY-EWSEELKETRPTAINLAWAINRIIAIV-- 106
Query: 191 WAKASPVNTVKTRLIQLIESML---EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCN 247
KA P +++ + ++ + E+D+ N + NGA L G L +LTHCN
Sbjct: 107 --KAGPFSSMHEIIDRITHEAIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCN 160
Query: 248 TGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LAT GTALGVIR L+ ++ Y ETRP QGAR
Sbjct: 161 AGALATGGLGTALGVIRKLYEQGQLEMVYADETRPLLQGAR 201
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 54/184 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+ +I + +L +LDQ LP + + + +AIK ++VRGAPAI + GL++
Sbjct: 1 MNNIEWRDDTLILLDQTKLPTQVEYIHCTDWRRVAEAIKMLRVRGAPAIGVAAGYGLILA 60
Query: 63 -----------------------DIKDKQ-------FPDNELIQLIES------------ 80
++K+ + + N +I ++++
Sbjct: 61 AEEANRLAVPFSEQLSAFYEWSEELKETRPTAINLAWAINRIIAIVKAGPFSSMHEIIDR 120
Query: 81 -------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ E+D+ N + NGA L L +LTHCN G+LAT GTALGVI
Sbjct: 121 ITHEAIVIHEEDVQLNTRMAINGAT----LFKGKQNLRILTHCNAGALATGGLGTALGVI 176
Query: 134 RSLH 137
R L+
Sbjct: 177 RKLY 180
>gi|212224083|ref|YP_002307319.1| translation initiation factor IF-2 [Thermococcus onnurineus NA1]
gi|212009040|gb|ACJ16422.1| translation initiation factor eIF-2B, beta subunit [Thermococcus
onnurineus NA1]
Length = 356
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A + VK + E + S ++ +K +++ + + ++D+ N +G
Sbjct: 94 DKLKNTRPTAVNLFWALNRVKKLVEEHREDS-LDEIKHLIVEEAQKIADEDVEANLRMGH 152
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ L + NVLTHCN GSLAT GT V+R +H + + ETRP
Sbjct: 153 YGAEVL-------PEGNVLTHCNAGSLATVHLGTVGAVLRVMHKEGTLKLLWVDETRPVL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+IYE +K++DQ LLP K++++ V++ +AI +MQVRG
Sbjct: 15 RSVIYESGKVKLIDQRLLPREFKVIELTTVDEVARAIVTMQVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQFPD--NELIQLI-- 78
A+ + L V + ++ D +E+ LI
Sbjct: 75 ETTKAKTKDEFMDGFYAAYDKLKNTRPTAVNLFWALNRVKKLVEEHREDSLDEIKHLIVE 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+ L + NVLTHCN GSLAT GT V+R +
Sbjct: 135 EAQKIADEDVEANLRMGHYGAEVL-------PEGNVLTHCNAGSLATVHLGTVGAVLRVM 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|108759489|ref|YP_634509.1| methylthioribose-1-phosphate isomerase [Myxococcus xanthus DK 1622]
gi|108463369|gb|ABF88554.1| eIF-2B alpha/beta/delta family protein [Myxococcus xanthus DK 1622]
Length = 368
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + L L RPTAVN+ A D ++ L A P V L + E++ +
Sbjct: 73 DASDGALEHALAVLRGTRPTAVNLHWALDDMRQLL---APLPPAERVAAAL-RRAEAISD 128
Query: 214 KDISDNKAIGRNGAQALID--LNPG-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+D++ N+AIG +G + L D + G +L VLTHCN G LAT ++GTAL I H A
Sbjct: 129 EDVAINRAIGAHGLKLLEDAWMRKGRQGRLEVLTHCNAGWLATVDFGTALSPIYQAHDAG 188
Query: 271 KIGAAYCTETRPYNQGAR 288
+ ETRP NQGA+
Sbjct: 189 IPVHVWVDETRPRNQGAQ 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 45/197 (22%)
Query: 2 KSLQSIIY--EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K ++SI + + + +DQ LPH V + +++A AI+SM VRGAP I G
Sbjct: 6 KPMRSIWLAPDAQAAEAIDQTRLPHALVSVRLTTLDEAAHAIRSMLVRGAPLIGATAAYG 65
Query: 60 LVVDIK-----------------------DKQFPDNELIQLI----------------ES 80
+ + ++ + + +++ QL+ E+
Sbjct: 66 VWLALRADASDGALEHALAVLRGTRPTAVNLHWALDDMRQLLAPLPPAERVAAALRRAEA 125
Query: 81 MLEKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ ++D++ N+AIG +G + L D R +L VLTHCN G LAT ++GTAL I H
Sbjct: 126 ISDEDVAINRAIGAHGLKLLEDAWMRKGRQGRLEVLTHCNAGWLATVDFGTALSPIYQAH 185
Query: 138 GANKIVDIK-DKQFPDN 153
A V + D+ P N
Sbjct: 186 DAGIPVHVWVDETRPRN 202
>gi|358448854|ref|ZP_09159349.1| hypothetical protein KYE_06206 [Marinobacter manganoxydans MnI7-9]
gi|357227004|gb|EHJ05474.1| hypothetical protein KYE_06206 [Marinobacter manganoxydans MnI7-9]
Length = 354
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL R G + +IK + + L ++RPTAVN+ A
Sbjct: 66 SAAYGVALAA-RHAGGGDWKAEIK---------------QAIRELAASRPTAVNLFWALQ 109
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ ++ RL ++ E+D++ N A+ A ++ + +V
Sbjct: 110 RMERIFH---ACHSLDEAVKRLASEARAIHEEDLAANFAM----ADHALEFIGAEAPFSV 162
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LAT YGTALGV+R LH + Y ETRP+ QG R
Sbjct: 163 LTHCNTGALATGGYGTALGVVRRLHEEKLLADVYADETRPWLQGGR 208
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 88/213 (41%), Gaps = 52/213 (24%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I + SL++LDQ LLP + + Q+I+ M VRGAPAI I G+ + +
Sbjct: 17 AIRWHGSSLELLDQRLLPGEEHWITLEGAAGVAQSIRDMVVRGAPAIGISAAYGVALAAR 76
Query: 66 DKQFPD---------NEL-------------IQLIESMLEKDISDNKAIGRNGAQA---- 99
D EL +Q +E + S ++A+ R ++A
Sbjct: 77 HAGGGDWKAEIKQAIRELAASRPTAVNLFWALQRMERIFHACHSLDEAVKRLASEARAIH 136
Query: 100 -------------LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
++ + +VLTHCNTG+LAT YGTALGV+R LH + D+
Sbjct: 137 EEDLAANFAMADHALEFIGAEAPFSVLTHCNTGALATGGYGTALGVVRRLHEEKLLADV- 195
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
Y E +L R TA + R
Sbjct: 196 ------------YADETRPWLQGGRLTAWELSR 216
>gi|443474262|ref|ZP_21064282.1| Methylthioribose-1-phosphate isomerase [Pseudomonas
pseudoalcaligenes KF707]
gi|442905269|gb|ELS30111.1| Methylthioribose-1-phosphate isomerase [Pseudomonas
pseudoalcaligenes KF707]
Length = 358
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG LG ++F + E L +RPTAVN+ A +
Sbjct: 62 SAAYGVVLGA--------------RERFKAGGDWRAALEEDFRALAESRPTAVNLFWALN 107
Query: 183 SVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
++ L + SP+ ++ I + ES D N + + G + LI + G +
Sbjct: 108 RMRERLDRVKEGESPLQALEAEAISIHES----DREANLTMAQLGME-LIRKHQGTPQ-A 161
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+LTHCNTG+LAT +GTALGVIR+ H + Y ETRP+ QGAR
Sbjct: 162 LLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYADETRPWLQGAR 208
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 62/251 (24%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L +LDQ LLP + ++ E QAI+ M VRGAPAI I G+V
Sbjct: 9 EKVRAIEWRDGALHLLDQRLLPAEEVWLSYHSAEGVAQAIRQMVVRGAPAIGISAAYGVV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLN---------- 111
+ +++ + +E + +++++ N AL + R+ ++
Sbjct: 69 LGARERFKAGGDWRAALEEDF-RALAESRPTAVNLFWALNRMRERLDRVKEGESPLQALE 127
Query: 112 ----------------------------------VLTHCNTGSLATAEYGTALGVIRSLH 137
+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AEAISIHESDREANLTMAQLGMELIRKHQGTPQALLTHCNTGALATGGFGTALGVIRAAH 187
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
+ +V+ Y E +L AR TA + A + V SL+ A A+
Sbjct: 188 -LDGLVE------------RVYADETRPWLQGARLTAWEL--ANEGVPVSLN--ADAAAA 230
Query: 198 NTVKTRLIQLI 208
+ +KT I +
Sbjct: 231 HLMKTAGITWV 241
>gi|332798402|ref|YP_004459901.1| methylthioribose-1-phosphate isomerase [Tepidanaerobacter
acetatoxydans Re1]
gi|438001346|ref|YP_007271089.1| Methylthioribose-1-phosphate isomerase [Tepidanaerobacter
acetatoxydans Re1]
gi|332696137|gb|AEE90594.1| Methylthioribose-1-phosphate isomerase [Tepidanaerobacter
acetatoxydans Re1]
gi|432178140|emb|CCP25113.1| Methylthioribose-1-phosphate isomerase [Tepidanaerobacter
acetatoxydans Re1]
Length = 348
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 54/189 (28%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M S+QS+ ++ L ++DQ LP + + +D AIK M VRGAPAI + G G+
Sbjct: 1 MTSIQSLEFKDGKLYLIDQRKLPEKLSMFECKEYKDVEFAIKDMIVRGAPAIGVAGAYGI 60
Query: 61 VV------DIKDKQFPDN----------------ELIQLIESML---------------- 82
V+ D+ ++F + L+ + M+
Sbjct: 61 VLAAKKFLDLPKEKFLEKIKESAAIVGNARPTAVNLMWAVRRMMNVLEVNRDRANSEIYE 120
Query: 83 ----------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
++D+ NKAI R G + + + +LTHCN G+LAT YGTALGV
Sbjct: 121 ILLDEAKNIEKEDLETNKAIARYGNEIVPE------GATILTHCNAGALATTGYGTALGV 174
Query: 133 IRSLHGANK 141
IR H K
Sbjct: 175 IREAHYMGK 183
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
A K +D+ ++F LEK + E + +ARPTAVN+ A + + L E +
Sbjct: 63 AAKKFLDLPKEKF-----LEK-IKESAAIVGNARPTAVNLMWAVRRMMNVL-EVNRDRAN 115
Query: 198 NTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYG 257
+ + L+ +++ ++D+ NKAI R G + + + G + +LTHCN G+LAT YG
Sbjct: 116 SEIYEILLDEAKNIEKEDLETNKAIARYGNEIVPE---GAT---ILTHCNAGALATTGYG 169
Query: 258 TALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
TALGVIR H K + ETRP QGA+
Sbjct: 170 TALGVIREAHYMGKNIRVFADETRPRLQGAK 200
>gi|89067680|ref|ZP_01155134.1| probable translation initiation factor eIF-2B alpha subunit
[Oceanicola granulosus HTCC2516]
gi|89046650|gb|EAR52705.1| probable translation initiation factor eIF-2B alpha subunit
[Oceanicola granulosus HTCC2516]
Length = 354
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
+ L+ + E L +ARPTAVN+ A + +++ W+ A + L + +
Sbjct: 73 EDLQARLSEADAVLRAARPTAVNLSWALNRMRAV---WSGAGDSEALLAALDREARRIEA 129
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+DI+ N+AI + L K+ HCNTGSLAT + GTALG+IRS H A
Sbjct: 130 EDIAVNRAISEQALKIL------PRKVTFFHHCNTGSLATVDLGTALGIIRSAHEAGHEV 183
Query: 274 AAYCTETRPYNQGAR 288
AY ETRP QGA+
Sbjct: 184 FAYIDETRPRLQGAK 198
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
+DI+ N+AI + L PR K+ HCNTGSLAT + GTALG+IRS H A V
Sbjct: 130 EDIAVNRAISEQALKIL----PR--KVTFFHHCNTGSLATVDLGTALGIIRSAHEAGHEV 183
>gi|398868652|ref|ZP_10624048.1| S-methyl-5-thioribose-1-phosphate isomerase [Pseudomonas sp. GM78]
gi|398232865|gb|EJN18817.1| S-methyl-5-thioribose-1-phosphate isomerase [Pseudomonas sp. GM78]
Length = 358
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK-ASPVNTVKTRLIQL 207
+F + + + E L ARPTAVN+ A ++ L+ K A P++ ++ + +
Sbjct: 74 RFAEGGHWQAALEEDFTLLADARPTAVNLFWALGRMRERLARLKKHADPLSVLEAEALAI 133
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
ES D N + + G LI + G ++ +LTHCNTG+LAT +GTALGVIR
Sbjct: 134 HES----DREANLTMAQLGVD-LIRKHQGNAQ-AILTHCNTGALATGGFGTALGVIRGAF 187
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ Y +ETRP+ QG+R
Sbjct: 188 IEGMVERVYASETRPWLQGSR 208
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 51/180 (28%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L +LDQ +LP + + +AI+SM VRGAPAI I G+V
Sbjct: 9 EKVKAIDWRDGTLYLLDQRVLPFEQTWIACTSAAGVAEAIRSMVVRGAPAIGISAAYGVV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKD---ISDNKAIGRNGAQALIDLNPRVSKLN------- 111
+ + + F + Q + LE+D ++D + N AL + R+++L
Sbjct: 69 LAARAR-FAEGGHWQ---AALEEDFTLLADARPTAVNLFWALGRMRERLARLKKHADPLS 124
Query: 112 -------------------------------------VLTHCNTGSLATAEYGTALGVIR 134
+LTHCNTG+LAT +GTALGVIR
Sbjct: 125 VLEAEALAIHESDREANLTMAQLGVDLIRKHQGNAQAILTHCNTGALATGGFGTALGVIR 184
>gi|297172641|gb|ADI23609.1| predicted translation initiation factor 2B subunit, eIF-2B
alpha/beta/delta family [uncultured gamma
proteobacterium HF4000_06A21]
Length = 364
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D + Y+ + L++ARPTA+N++ A D V S L +A+P L + +++ +
Sbjct: 73 DPSDDYLQAQALALIAARPTAINLRWAVDRVCSRL---LQATPKQRADLALKE-AQTICD 128
Query: 214 KDISDNKAIGRNGAQALIDL-------NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL 266
+D+ +N IG +G ++ NP LNVLTHCN G LAT ++GTAL I
Sbjct: 129 EDVDNNSCIGSHGETVFVEHWRAKGSKNP----LNVLTHCNAGWLATVDWGTALAPIFKA 184
Query: 267 HGANKIGAAYCTETRPYNQGA 287
H A + ETRP NQGA
Sbjct: 185 HNAGIPVHVWVDETRPRNQGA 205
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 45/185 (24%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL------------ 60
S+ ++DQ LP ++ + ++ AIK M VRGAP I GL
Sbjct: 19 SVAVIDQTKLPFYFEIRTLRTCDEVVLAIKDMVVRGAPLIGASAACGLRLATLEDPSDDY 78
Query: 61 ----------------------------VVDIKDKQFPDNELIQLIESMLEKDISDNKAI 92
++ KQ D L + +++ ++D+ +N I
Sbjct: 79 LQAQALALIAARPTAINLRWAVDRVCSRLLQATPKQRADLALKE-AQTICDEDVDNNSCI 137
Query: 93 GRNGAQALID-LNPRVSK--LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DK 148
G +G ++ + SK LNVLTHCN G LAT ++GTAL I H A V + D+
Sbjct: 138 GSHGETVFVEHWRAKGSKNPLNVLTHCNAGWLATVDWGTALAPIFKAHNAGIPVHVWVDE 197
Query: 149 QFPDN 153
P N
Sbjct: 198 TRPRN 202
>gi|258404636|ref|YP_003197378.1| translation initiation factor, aIF-2BI family [Desulfohalobium
retbaense DSM 5692]
gi|257796863|gb|ACV67800.1| translation initiation factor, aIF-2BI family [Desulfohalobium
retbaense DSM 5692]
Length = 350
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 13/128 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV---NTVKTRLIQLIESMLEKDISDNK 220
L+ L ARPTAVN++ A ++++ +A P ++ +++ + + +DI NK
Sbjct: 84 LERLEDARPTAVNLRWAIRRMRAA----QEADPEMANEELQWVWLKMAKDIHAEDIRINK 139
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
IG +GA L + V+THCN G+LAT YGTALGV+R+ G K ET
Sbjct: 140 LIGGHGAAVLPE------TATVMTHCNAGALATGGYGTALGVVRAGVGQGKTIRVIANET 193
Query: 281 RPYNQGAR 288
RP+ QGAR
Sbjct: 194 RPFLQGAR 201
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 78/185 (42%), Gaps = 55/185 (29%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---- 65
++++L +LDQ LP K VED A+K M VRGAPAI + G + +
Sbjct: 10 DENALLLLDQRFLPLQEKWFVCRTVEDVITALKEMVVRGAPAIGVCAAYGCFLGARQVAE 69
Query: 66 -----------------------------------------DKQFPDNEL----IQLIES 80
D + + EL +++ +
Sbjct: 70 LTSNGDWRVELDRLLERLEDARPTAVNLRWAIRRMRAAQEADPEMANEELQWVWLKMAKD 129
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+ +DI NK IG +GA L P + V+THCN G+LAT YGTALGV+R+ G
Sbjct: 130 IHAEDIRINKLIGGHGAAVL----PETA--TVMTHCNAGALATGGYGTALGVVRAGVGQG 183
Query: 141 KIVDI 145
K + +
Sbjct: 184 KTIRV 188
>gi|218526897|sp|A9BJF6.2|MTNA1_PETMO RecName: Full=Methylthioribose-1-phosphate isomerase 1; Short=M1Pi
1; Short=MTR-1-P isomerase 1; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase 1
Length = 347
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+K E DY ++RPTAVN+ A + E + V+ +K L+ E + +D
Sbjct: 76 FKKEFEEVRDYFATSRPTAVNLFWALKRMTRRF-EQEEDKTVDKIKQALLDESEKIFAED 134
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+KAIG++G L L PG + +LTHCN G LA++ YGTAL I H
Sbjct: 135 QEMSKAIGKHG---LSLLKPG---MGLLTHCNAGGLASSGYGTALAPIYLGHEKGYNFKV 188
Query: 276 YCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 189 YADETRPLLQGAR 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 54/175 (30%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------- 62
K+ L I+DQ LLP+ K ++++N E+ ++AIK ++VRGAPAI I GL V
Sbjct: 12 KNKLVIIDQTLLPNEEKFLELDNPEEIWEAIKKLRVRGAPAIGIAAAFGLYVSTLKSKAA 71
Query: 63 ----------DIKD--------------------KQFPDNE----------LIQLIESML 82
+++D ++F E L+ E +
Sbjct: 72 NVAQFKKEFEEVRDYFATSRPTAVNLFWALKRMTRRFEQEEDKTVDKIKQALLDESEKIF 131
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+D +KAIG++G L L P + +LTHCN G LA++ YGTAL I H
Sbjct: 132 AEDQEMSKAIGKHG---LSLLKP---GMGLLTHCNAGGLASSGYGTALAPIYLGH 180
>gi|163848569|ref|YP_001636613.1| aIF-2BI family translation initiation factor [Chloroflexus
aurantiacus J-10-fl]
gi|222526504|ref|YP_002570975.1| translation initiation factor, aIF-2BI family [Chloroflexus sp.
Y-400-fl]
gi|218526595|sp|A9WGQ8.1|MTNA_CHLAA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|254813641|sp|B9LBK4.1|MTNA_CHLSY RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|163669858|gb|ABY36224.1| translation initiation factor, aIF-2BI family [Chloroflexus
aurantiacus J-10-fl]
gi|222450383|gb|ACM54649.1| translation initiation factor, aIF-2BI family [Chloroflexus sp.
Y-400-fl]
Length = 347
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 67/225 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
L+++ +E ++ ++DQ LPHT ++V ++ AI+SMQVRGAPAI G+ +
Sbjct: 3 LRTVWWENDAVCLIDQRKLPHTMEVVRCTDLAAVAYAIRSMQVRGAPAIGCTAAYGMALV 62
Query: 64 IK---------------------DKQFPD-------------------NELIQLI----- 78
+ D Q P +E ++ I
Sbjct: 63 AQQSVALTPSALLTELVQAKATLDSQRPTAVNLAWATSRMLRRAEAVASEGVEAIKHALH 122
Query: 79 ---ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E++ +D++ AIG +GA + PR +VLTHCN G LATA YGTAL IR+
Sbjct: 123 AEAEAIFAEDLAMCHAIGEHGASLI---PPRG---HVLTHCNAGGLATAGYGTALAPIRT 176
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
F + +V E +L AR TA + +A
Sbjct: 177 -------------AFAQGRPVHVFVDETRPFLQGARLTAWELLQA 208
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
S RPTAVN+ A + +E + V +K L E++ +D++ AIG +GA
Sbjct: 87 SQRPTAVNLAWATSRMLRR-AEAVASEGVEAIKHALHAEAEAIFAEDLAMCHAIGEHGA- 144
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
L P + +VLTHCN G LATA YGTAL IR+ + + ETRP+ QGAR
Sbjct: 145 ---SLIP--PRGHVLTHCNAGGLATAGYGTALAPIRTAFAQGRPVHVFVDETRPFLQGAR 199
>gi|405363071|ref|ZP_11026069.1| Methylthioribose-1-phosphate isomerase [Chondromyces apiculatus DSM
436]
gi|397090014|gb|EJJ20900.1| Methylthioribose-1-phosphate isomerase [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 368
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L RPTAVN+ A D +++ L A P V L Q E++ ++D++ N+AIG
Sbjct: 83 LTVLRGTRPTAVNLHWALDDMRTVL---APLPPPERVAAAL-QRAEAISDEDVAINRAIG 138
Query: 224 RNGAQAL---IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+G + L + +L VLTHCN G LAT ++GTAL I H A + ET
Sbjct: 139 AHGLKLLESAWERKGRQGRLEVLTHCNAGWLATVDFGTALSPIYQAHDAGIPVHVWVDET 198
Query: 281 RPYNQGAR 288
RP NQGA+
Sbjct: 199 RPRNQGAQ 206
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 44/196 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M+S+ + + + + +DQ LPH V + ++ A AI+SMQVRGAP I G+
Sbjct: 8 MRSIW-LAADGEAAEAIDQTRLPHALVTVRLATLDAAAHAIRSMQVRGAPLIGATAAYGV 66
Query: 61 VVDIKDK-----------------------------------QFPDNELI----QLIESM 81
+ ++ + P E + Q E++
Sbjct: 67 WLALRAEASDSALEHALTVLRGTRPTAVNLHWALDDMRTVLAPLPPPERVAAALQRAEAI 126
Query: 82 LEKDISDNKAIGRNGAQAL---IDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 138
++D++ N+AIG +G + L + R +L VLTHCN G LAT ++GTAL I H
Sbjct: 127 SDEDVAINRAIGAHGLKLLESAWERKGRQGRLEVLTHCNAGWLATVDFGTALSPIYQAHD 186
Query: 139 ANKIVDIK-DKQFPDN 153
A V + D+ P N
Sbjct: 187 AGIPVHVWVDETRPRN 202
>gi|339018914|ref|ZP_08645035.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
tropicalis NBRC 101654]
gi|338752009|dbj|GAA08339.1| translation initiation factor (IF-2B) alpha subunit [Acetobacter
tropicalis NBRC 101654]
Length = 364
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 43/184 (23%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK----DKQ 68
S+ I DQ LP + ++ + ED AI++MQVRGAP I V GL + ++ D
Sbjct: 20 SIHIFDQTRLPFSLDILQLTTPEDVAHAIRTMQVRGAPLIGAVAAYGLALALRQNSSDSA 79
Query: 69 FPDN------------ELIQLIESML-----------------------EKDISDNKAIG 93
+ L IE ML ++D + N+AIG
Sbjct: 80 MEEQASLLAATRPTAINLRWAIERMLSHLRPLSPDQRVQAAYAEAGRICDEDAAQNEAIG 139
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQ 149
R+G + ++ P +++N+LTHCN G +AT ++GTAL I H A V + D+
Sbjct: 140 RHGLSLIQEIAKNRPPGTRINLLTHCNAGWIATVDWGTALAPIYMAHDAGLNVHVWVDET 199
Query: 150 FPDN 153
P N
Sbjct: 200 RPRN 203
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E+ L + RPTA+N++ A + + S L SP V+ + + ++D + N+A
Sbjct: 82 EQASLLAATRPTAINLRWAIERMLSHLR---PLSPDQRVQAAYAE-AGRICDEDAAQNEA 137
Query: 222 IGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
IGR+G + ++ P +++N+LTHCN G +AT ++GTAL I H A +
Sbjct: 138 IGRHGLSLIQEIAKNRPPGTRINLLTHCNAGWIATVDWGTALAPIYMAHDAGLNVHVWVD 197
Query: 279 ETRPYNQGA 287
ETRP NQGA
Sbjct: 198 ETRPRNQGA 206
>gi|160902112|ref|YP_001567693.1| aIF-2BI family translation initiation factor [Petrotoga mobilis
SJ95]
gi|160359756|gb|ABX31370.1| translation initiation factor, aIF-2BI family [Petrotoga mobilis
SJ95]
Length = 372
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+K E DY ++RPTAVN+ A + E + V+ +K L+ E + +D
Sbjct: 101 FKKEFEEVRDYFATSRPTAVNLFWALKRMTRRF-EQEEDKTVDKIKQALLDESEKIFAED 159
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+KAIG++G L L PG + +LTHCN G LA++ YGTAL I H
Sbjct: 160 QEMSKAIGKHG---LSLLKPG---MGLLTHCNAGGLASSGYGTALAPIYLGHEKGYNFKV 213
Query: 276 YCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 214 YADETRPLLQGAR 226
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 54/175 (30%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------- 62
K+ L I+DQ LLP+ K ++++N E+ ++AIK ++VRGAPAI I GL V
Sbjct: 37 KNKLVIIDQTLLPNEEKFLELDNPEEIWEAIKKLRVRGAPAIGIAAAFGLYVSTLKSKAA 96
Query: 63 ----------DIKD--------------------KQFPDNE----------LIQLIESML 82
+++D ++F E L+ E +
Sbjct: 97 NVAQFKKEFEEVRDYFATSRPTAVNLFWALKRMTRRFEQEEDKTVDKIKQALLDESEKIF 156
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+D +KAIG++G L L P + +LTHCN G LA++ YGTAL I H
Sbjct: 157 AEDQEMSKAIGKHG---LSLLKP---GMGLLTHCNAGGLASSGYGTALAPIYLGH 205
>gi|146305015|ref|YP_001192331.1| translation initiation factor 2B subunit I [Metallosphaera sedula
DSM 5348]
gi|145703265|gb|ABP96407.1| translation initiation factor 2B subunit I family (IF-2BI)
[Metallosphaera sedula DSM 5348]
Length = 349
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIE 209
D +L + + + L RPTA N+ A D +++ + SP K R+++
Sbjct: 73 DVQTLYQVLNRAAERLSRTRPTAYNLFWAIDRMRAKANSLISDNVSP-EEFKERIVEEAL 131
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+ +DI N+ +G G+Q + D + +LTHCNTGSLATA +GTALGVIR+
Sbjct: 132 RIQREDIEINRRMGEIGSQVIKDGDV------ILTHCNTGSLATAGFGTALGVIRTAWLQ 185
Query: 270 NKIGAAYCTETRPYNQGAR 288
K TETRP QGAR
Sbjct: 186 GKSIRVIATETRPLLQGAR 204
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 46/181 (25%)
Query: 1 MKSLQSII---YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC 57
M+ L I+ +E + L+ +P + + +N ED +AI++M+VRGAPAI ++
Sbjct: 1 MRKLSDIVPLKFENGKVVWLNTSAIPWKEEYKESSNYEDIARAIETMEVRGAPAIGVMAA 60
Query: 58 LGLVVDIKDKQFPDNELIQLIE----------------------------SMLEKDISDN 89
LG+ + + Q L Q++ S++ ++S
Sbjct: 61 LGIAAAVYNSQGDVQTLYQVLNRAAERLSRTRPTAYNLFWAIDRMRAKANSLISDNVSPE 120
Query: 90 KAIGRNGAQAL------IDLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIR 134
+ R +AL I++N R+ ++ +LTHCNTGSLATA +GTALGVIR
Sbjct: 121 EFKERIVEEALRIQREDIEINRRMGEIGSQVIKDGDVILTHCNTGSLATAGFGTALGVIR 180
Query: 135 S 135
+
Sbjct: 181 T 181
>gi|387814818|ref|YP_005430305.1| methylthioribose-1-phosphate isomerase (MTR-1-P isomerase)
(S-methyl-5-thioribose-1-phosphate isomerase)
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339835|emb|CCG95882.1| putative methylthioribose-1-phosphate isomerase (MTR-1-P isomerase)
(S-methyl-5-thioribose-1-phosphate isomerase)
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 337
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL R G + +IK + + L +RPTAVN+ A +
Sbjct: 49 SAAYGVALAA-RHAGGGDWQAEIK---------------QAIRVLAKSRPTAVNLFWALE 92
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ ++ RL + E D++ N A+ AL +NP + V
Sbjct: 93 RMEKVFH---ACHSLDEATDRLAAEAVRLHEDDLAANLAMAD---YALEVMNPD-KPVAV 145
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LAT YGTALGVIR LH + Y ETRP+ QG+R
Sbjct: 146 LTHCNTGALATGGYGTALGVIRRLHEEKLLKRVYADETRPWLQGSR 191
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 41/169 (24%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK--- 65
+ L++LDQ LLP + + Q I M VRGAPAI I G+ + +
Sbjct: 3 WHGDRLELLDQRLLPAEEHWIVADGASAVAQCITDMVVRGAPAIGISAAYGVALAARHAG 62
Query: 66 --DKQFPDNELIQLI-----------------ESMLEKDISDNKAIGRNGAQA------- 99
D Q + I+++ E + S ++A R A+A
Sbjct: 63 GGDWQAEIKQAIRVLAKSRPTAVNLFWALERMEKVFHACHSLDEATDRLAAEAVRLHEDD 122
Query: 100 -----------LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
L +NP + VLTHCNTG+LAT YGTALGVIR LH
Sbjct: 123 LAANLAMADYALEVMNPD-KPVAVLTHCNTGALATGGYGTALGVIRRLH 170
>gi|312880058|ref|ZP_07739858.1| methylthioribose-1-phosphate isomerase [Aminomonas paucivorans DSM
12260]
gi|310783349|gb|EFQ23747.1| methylthioribose-1-phosphate isomerase [Aminomonas paucivorans DSM
12260]
Length = 337
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 11/127 (8%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E + L +RPTAVN+ A + ++ P +++ E+MLE+D N+
Sbjct: 74 EAAERLARSRPTAVNLFWALERMRPLFP-----LPPEERAEKMLAEAETMLEEDRERNRR 128
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+G GA L P ++ V+THCN G+LAT +GTALGV+R+ K Y ETR
Sbjct: 129 MGAFGASLL----PQTAR--VITHCNAGALATGGFGTALGVLRAAREQGKELVVYADETR 182
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 183 PRLQGAR 189
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 42/161 (26%)
Query: 11 KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ-- 68
+ +L++LDQ LP + + +AI+SM VRGAPAI + GL ++
Sbjct: 12 EEALEVLDQRALPFQVRHLRCRRASQVAEAIESMAVRGAPAIGLAAAFGLALEALHAPEG 71
Query: 69 ----------------------------FP------DNELIQLIESMLEKDISDNKAIGR 94
FP +++ E+MLE+D N+ +G
Sbjct: 72 LPEAAERLARSRPTAVNLFWALERMRPLFPLPPEERAEKMLAEAETMLEEDRERNRRMGA 131
Query: 95 NGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
GA L P+ ++ V+THCN G+LAT +GTALGV+R+
Sbjct: 132 FGASLL----PQTAR--VITHCNAGALATGGFGTALGVLRA 166
>gi|120555404|ref|YP_959755.1| eIF-2B alpha/beta/delta-like protein [Marinobacter aquaeolei VT8]
gi|218526914|sp|A1U3J9.1|MTNA_MARAV RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|120325253|gb|ABM19568.1| translation initiation factor 2B subunit I family (IF-2BI)
[Marinobacter aquaeolei VT8]
Length = 351
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL R G + +IK + + L +RPTAVN+ A +
Sbjct: 63 SAAYGVALAA-RHAGGGDWQAEIK---------------QAIRVLAKSRPTAVNLFWALE 106
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ ++ RL + E D++ N A+ AL +NP + V
Sbjct: 107 RMEKVFH---ACHSLDEATDRLAAEAVRLHEDDLAANLAMAD---YALEVMNPD-KPIAV 159
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LAT YGTALGVIR LH + Y ETRP+ QG+R
Sbjct: 160 LTHCNTGALATGGYGTALGVIRRLHEEKLLKRVYADETRPWLQGSR 205
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 77/178 (43%), Gaps = 43/178 (24%)
Query: 2 KSLQSIIYEKHS--LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
+S+ ++ H L++LDQ LLP + + Q I M VRGAPAI I G
Sbjct: 8 RSIGTVAMRWHGDRLELLDQRLLPAEEHWIVADGASAVAQCITDMVVRGAPAIGISAAYG 67
Query: 60 LVVDIK-----DKQFPDNELIQLI-----------------ESMLEKDISDNKAIGRNGA 97
+ + + D Q + I+++ E + S ++A R A
Sbjct: 68 VALAARHAGGGDWQAEIKQAIRVLAKSRPTAVNLFWALERMEKVFHACHSLDEATDRLAA 127
Query: 98 QA------------------LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+A L +NP + VLTHCNTG+LAT YGTALGVIR LH
Sbjct: 128 EAVRLHEDDLAANLAMADYALEVMNPD-KPIAVLTHCNTGALATGGYGTALGVIRRLH 184
>gi|91774049|ref|YP_566741.1| translation initiation factor IF-2B subunit alpha [Methanococcoides
burtonii DSM 6242]
gi|91713064|gb|ABE52991.1| Ribose-1,5-bisphosphate isomerase [Methanococcoides burtonii DSM
6242]
Length = 339
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L++ RPTAVN+ A + V + + + + ++K +I + ++D+ NKAIG+ G
Sbjct: 85 LIATRPTAVNLAWAVNRVLKATED---SYDLESIKDIVIFEAIRIADEDVKINKAIGKYG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L D + V+THCN G LA ++GTALGVIRS K + ETRP NQG
Sbjct: 142 QKLLDDGD------TVMTHCNAGRLACVDWGTALGVIRSAVEKGKEISVIACETRPLNQG 195
Query: 287 AR 288
R
Sbjct: 196 GR 197
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++D+ NKAIG+ G + L D + V+THCN G LA ++GTALGVIRS
Sbjct: 128 DEDVKINKAIGKYGQKLLDDGD------TVMTHCNAGRLACVDWGTALGVIRS 174
>gi|449136365|ref|ZP_21771753.1| translation initiation factor, aIF-2BI family [Rhodopirellula
europaea 6C]
gi|448884985|gb|EMB15449.1| translation initiation factor, aIF-2BI family [Rhodopirellula
europaea 6C]
Length = 356
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
+ +D+L ++RPTAVN+ A D +++ + +A V ++ +L+ + + D ++
Sbjct: 88 QTIDHLATSRPTAVNLFWALDRMRAIVDGFA--GEVAELREQLVTEAIRIHDDDRQMCRS 145
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IGRNGA L +V+THCN GSLAT+ +GTAL + LH + + ETR
Sbjct: 146 IGRNGATLLAHCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGHTLEVFADETR 199
Query: 282 PYNQGAR 288
P QGAR
Sbjct: 200 PLLQGAR 206
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 90 KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQ 149
++IGRNGA L +V+THCN GSLAT+ +GTAL + LH +
Sbjct: 144 RSIGRNGATLLAHCK------SVMTHCNAGSLATSMWGTALAPMYHLHESGH-------- 189
Query: 150 FPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA-------DSVKSSL 188
+LE + E L AR TA + +A DS+ SL
Sbjct: 190 -----TLEVFADETRPLLQGARLTAWELHQAGIPVTVCTDSMSGSL 230
>gi|411117536|ref|ZP_11390023.1| methylthioribose-1-phosphate isomerase [Oscillatoriales
cyanobacterium JSC-12]
gi|410713639|gb|EKQ71140.1| methylthioribose-1-phosphate isomerase [Oscillatoriales
cyanobacterium JSC-12]
Length = 353
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 74/133 (55%), Gaps = 9/133 (6%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
LEK V E+L + RPTAVN+ A D + + V+ +K L++ +++ D
Sbjct: 82 LEK-VAERLR---TTRPTAVNLFWAIDRMIKVAHQ--TLGSVDYLKQMLLETAQTINADD 135
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
I + IG +G L +P KL +LTHCN G+LATA YGTALGV+RS ++
Sbjct: 136 IRTCQQIGDHGLSVL-PTSP--EKLRLLTHCNAGALATAGYGTALGVVRSAWRDGRLERV 192
Query: 276 YCTETRPYNQGAR 288
Y ETRP QGA+
Sbjct: 193 YADETRPRLQGAK 205
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 51/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
I Y+ H ++++DQ LP+ V+I ED AI++M VRGAPAI + G+ + +D
Sbjct: 11 IWYDNH-VRLIDQTRLPNEFDWVEIRRYEDMATAIETMIVRGAPAIGVAAAYGVYLGARD 69
Query: 67 KQFPD-NELIQLIESMLEK----------------------------------------- 84
D E + +E + E+
Sbjct: 70 IATRDRTEFLTQLEKVAERLRTTRPTAVNLFWAIDRMIKVAHQTLGSVDYLKQMLLETAQ 129
Query: 85 -----DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
DI + IG +G L +P KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 130 TINADDIRTCQQIGDHGLSVL-PTSP--EKLRLLTHCNAGALATAGYGTALGVVRS 182
>gi|428314256|ref|YP_007125233.1| methylthioribose-1-phosphate isomerase [Microcoleus sp. PCC 7113]
gi|428255868|gb|AFZ21827.1| methylthioribose-1-phosphate isomerase [Microcoleus sp. PCC 7113]
Length = 352
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 171 RPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQAL 230
RPTAVN+ A + + E V ++ L++ +++ +D+ + IG G + L
Sbjct: 93 RPTAVNLFWAIARMLKTAYE--TIGSVEALQASLLKTAQAIQLEDLQTCQMIGDRGLEVL 150
Query: 231 IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
NP +L +LT+CNTG+LATA YGTALGV+RS ++ Y +ETRP QGA+
Sbjct: 151 PS-NP--QQLCLLTYCNTGALATAGYGTALGVVRSAWREGRLARVYASETRPRQQGAK 205
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ + + ++DQ LP +V+I+ +D +AIK+M VRGAPAI + G+ + ++
Sbjct: 10 VIWHEDRVLLIDQTKLPSEYVIVEISRCDDMARAIKTMIVRGAPAIGVAAAYGMYLGARE 69
Query: 67 KQFPDNE----------------------LIQLIESMLE--------------------- 83
Q + E L I ML+
Sbjct: 70 IQTQEREAFLSQLEDVAQVLRLTRPTAVNLFWAIARMLKTAYETIGSVEALQASLLKTAQ 129
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ + IG G + L NP+ +L +LT+CNTG+LATA YGTALGV+RS
Sbjct: 130 AIQLEDLQTCQMIGDRGLEVLPS-NPQ--QLCLLTYCNTGALATAGYGTALGVVRS 182
>gi|294866508|ref|XP_002764751.1| Translation initiation factor eIF-2B subunit delta, putative
[Perkinsus marinus ATCC 50983]
gi|239864441|gb|EEQ97468.1| Translation initiation factor eIF-2B subunit delta, putative
[Perkinsus marinus ATCC 50983]
Length = 355
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQ 228
SARPTAVN+ A V LS + V+ ++Q + + E+DI N+ +G NGA
Sbjct: 110 SARPTAVNLSWATGVV---LSRGLRDGEVDV--KEIVQAAKMIFEEDIKTNRMLGDNGAA 164
Query: 229 ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG----AAYCTETRPYN 284
++D + +L HCNTG LAT +GTALGV SL ++G Y ETRP
Sbjct: 165 HILDRRGKSGTIRLLHHCNTGFLATCGHGTALGVCYSL--CERVGRENTMVYVDETRPRL 222
Query: 285 QGA 287
QGA
Sbjct: 223 QGA 225
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 64 IKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLAT 123
++D + E++Q + + E+DI N+ +G NGA ++D + + +L HCNTG LAT
Sbjct: 130 LRDGEVDVKEIVQAAKMIFEEDIKTNRMLGDNGAAHILDRRGKSGTIRLLHHCNTGFLAT 189
Query: 124 AEYGTALGVIRSL 136
+GTALGV SL
Sbjct: 190 CGHGTALGVCYSL 202
Score = 37.7 bits (86), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR 47
L++LDQ LLPH +D ED + IK+M+VR
Sbjct: 19 LRVLDQSLLPHEIAYIDCAVKEDVFNVIKTMKVR 52
>gi|225181020|ref|ZP_03734467.1| translation initiation factor, aIF-2BI family [Dethiobacter
alkaliphilus AHT 1]
gi|225168217|gb|EEG77021.1| translation initiation factor, aIF-2BI family [Dethiobacter
alkaliphilus AHT 1]
Length = 349
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 148 KQFPDNDSLEKYVG--EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
KQ+ DS + G E L + RPTAVN+ A + + + +P + L
Sbjct: 62 KQWSSVDSERFFAGLEEAAKGLKATRPTAVNLAWAVERMLNVARTQRGVAP-REIADILD 120
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ ++DI+ NK IG GA + D K +LTHCN G+LAT YGTALGVIR
Sbjct: 121 AEARRIAQEDIAVNKKIGDFGAGLIND------KARILTHCNAGALATVGYGTALGVIRR 174
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
K + ETRPY QGAR
Sbjct: 175 AVAHGKEVHVFADETRPYLQGAR 197
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 87/224 (38%), Gaps = 67/224 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ I +E + +LDQ LLP K ++ + ++ I+ M VRGAPAI G+ +
Sbjct: 1 MDPIRFEYGVVFLLDQRLLPVEVKYMECKSWQEVAAGIRDMVVRGAPAIGASAAFGMALA 60
Query: 64 IKDKQFPDNE----------------------LIQLIESML------------------- 82
K D+E L +E ML
Sbjct: 61 AKQWSSVDSERFFAGLEEAAKGLKATRPTAVNLAWAVERMLNVARTQRGVAPREIADILD 120
Query: 83 -------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++DI+ NK IG GA + D K +LTHCN G+LAT YGTALGVIR
Sbjct: 121 AEARRIAQEDIAVNKKIGDFGAGLIND------KARILTHCNAGALATVGYGTALGVIRR 174
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
K V + + E YL AR TA + R
Sbjct: 175 AVAHGKEVHV-------------FADETRPYLQGARLTAWELHR 205
>gi|240103613|ref|YP_002959922.1| translation initiation factor IF-2B subunit beta [Thermococcus
gammatolerans EJ3]
gi|239911167|gb|ACS34058.1| Translation initiation factor eIF-2B subunit 1 (eIF-2BI)
[Thermococcus gammatolerans EJ3]
Length = 357
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + +K + E A+ SP++ +K ++ + + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIKKLVEENAE-SPLDELKKLIVAEAQRIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+AL + NVLTHCN GSLAT + GT V+R ++ + + ETRP QG
Sbjct: 155 AEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVMNKDGTLKLLWVDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ YE + ++DQ LLP K++++ VE+ +AI +M+VRG
Sbjct: 15 RSVRYETGKVIMIDQTLLPKEFKIIELRTVEEVAEAIITMKVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDI--KDKQFPDNELIQLI-- 78
A+ + L + + ++ + P +EL +LI
Sbjct: 75 DTTKAKNKDEFMDGFYRAYETLKNTRPTAVNLFWALNRIKKLVEENAESPLDELKKLIVA 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+AL + NVLTHCN GSLAT + GT V+R +
Sbjct: 135 EAQRIADEDVEANLRMGHYGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVM 187
Query: 137 H 137
+
Sbjct: 188 N 188
>gi|146310798|ref|YP_001175872.1| translation initiation factor 2B subunit I [Enterobacter sp. 638]
gi|218526613|sp|A4W7Z1.1|MTNA_ENT38 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|145317674|gb|ABP59821.1| methylthioribose-1-phosphate isomerase [Enterobacter sp. 638]
Length = 342
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 71/125 (56%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
LD L ++RPTAVN+ D +K +L W + V + T ++LIE +K + D AI
Sbjct: 79 LDTLRASRPTAVNLMNNLDRMKQAL--W-QEDFVPALVTEALRLIEE--DKQLCD--AIA 131
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
R G+Q + PG S+L LTHCNTG LATA GTALGVI A + + ETRP
Sbjct: 132 RAGSQLV---KPG-SRL--LTHCNTGGLATAGVGTALGVIAHAFAAGNVNNVWVDETRPL 185
Query: 284 NQGAR 288
QG R
Sbjct: 186 LQGGR 190
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 44/180 (24%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC- 57
M++LQ S+ + L ILDQ LP + +D + VE I +++VRGAP I +
Sbjct: 1 MQTLQTTSLRVADNQLFILDQQALPQEKRWLDASTVEALVGHIHALRVRGAPLIGLSASL 60
Query: 58 --------------LGLVVDIKDKQFPD-----NELIQLIESMLEKD------------I 86
L + +D P N L ++ +++ ++D I
Sbjct: 61 LLALLAENGHSRDQLAVALDTLRASRPTAVNLMNNLDRMKQALWQEDFVPALVTEALRLI 120
Query: 87 SDNK----AIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
++K AI R G+Q L+ R+ LTHCNTG LATA GTALGVI A +
Sbjct: 121 EEDKQLCDAIARAGSQ-LVKPGSRL-----LTHCNTGGLATAGVGTALGVIAHAFAAGNV 174
>gi|404483578|ref|ZP_11018798.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridiales
bacterium OBRC5-5]
gi|404343305|gb|EJZ69669.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridiales
bacterium OBRC5-5]
Length = 363
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV + A IK + D EK E +Y S+RPTAVN+ A + ++ +L
Sbjct: 58 AIGVCAAYGIAKTASQIKAVNYSD---FEKEFLELKEYFASSRPTAVNLFWALNRMEDAL 114
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
K ++ +K L + E + +D+ ++ IG G + L L ++ ++THCN
Sbjct: 115 KA-NKEKSIDEIKEALFKEAEDIRNEDVEISRGIGTLGFKLLKKLKRNGKEIGIMTHCNA 173
Query: 249 GSLATAEYGTA-----LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LATA+YGTA + + +G + YC ETRP QGAR
Sbjct: 174 GTLATAKYGTATAPMYMALENGFNGDDM--HVYCDETRPLLQGAR 216
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 92/229 (40%), Gaps = 64/229 (27%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---VVDIKD 66
E L I+DQ LLP K +++N E+ ++AIK ++VRGAPAI + G+ IK
Sbjct: 17 EGGELNIIDQTLLPGEIKRINLNTKEEIWEAIKKLRVRGAPAIGVCAAYGIAKTASQIKA 76
Query: 67 KQFPDNE---------------------------------------------LIQLIESM 81
+ D E L + E +
Sbjct: 77 VNYSDFEKEFLELKEYFASSRPTAVNLFWALNRMEDALKANKEKSIDEIKEALFKEAEDI 136
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL--HGA 139
+D+ ++ IG G + L L ++ ++THCN G+LATA+YGTA + +G
Sbjct: 137 RNEDVEISRGIGTLGFKLLKKLKRNGKEIGIMTHCNAGTLATAKYGTATAPMYMALENGF 196
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
N D + Y E L AR TA + A +K++L
Sbjct: 197 N------------GDDMHVYCDETRPLLQGARLTAFELSNAG--IKTTL 231
>gi|335423857|ref|ZP_08552875.1| methylthioribose-1-phosphate isomerase [Salinisphaera shabanensis
E1L3A]
gi|334890608|gb|EGM28870.1| methylthioribose-1-phosphate isomerase [Salinisphaera shabanensis
E1L3A]
Length = 346
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 13/131 (9%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
+ VG + L ARPTAVN+ A D++ +L + +T ++ E++ + D +
Sbjct: 73 ETVGRAIARLREARPTAVNLMHAMDALARALEQ-------EDWRTAVVHNAEALFDNDRA 125
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
A+ +GA ALI +LTHCNTG LATA GTALGVIR H + + +
Sbjct: 126 LCDAMAEHGA-ALIGAGE-----RILTHCNTGGLATAGIGTALGVIRRAHERDNSISVWV 179
Query: 278 TETRPYNQGAR 288
ETRP QG R
Sbjct: 180 DETRPLLQGGR 190
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 42/160 (26%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAP----------------------- 50
L +LDQ LPH +++V+ +AI +++ RGAP
Sbjct: 16 LTLLDQSRLPHVQAWFAVDDVDTLVEAIHALRTRGAPMIAIAAALLVAVRVEAGDDRETV 75
Query: 51 -------------AIAIVGCLGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGA 97
A+ ++ + + +++ ++ E++ + D + A+ +GA
Sbjct: 76 GRAIARLREARPTAVNLMHAMDALARALEQEDWRTAVVHNAEALFDNDRALCDAMAEHGA 135
Query: 98 QALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
ALI R+ LTHCNTG LATA GTALGVIR H
Sbjct: 136 -ALIGAGERI-----LTHCNTGGLATAGIGTALGVIRRAH 169
>gi|336477620|ref|YP_004616761.1| translation initiation factor, aIF-2BI family [Methanosalsum
zhilinae DSM 4017]
gi|335931001|gb|AEH61542.1| translation initiation factor, aIF-2BI family [Methanosalsum
zhilinae DSM 4017]
Length = 339
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 13/137 (9%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM-- 211
DSL + + + + + S RPTA+N+ D V ++S+ NT R I + E++
Sbjct: 72 DSLIQDLEKAAEIIKSTRPTAINLAWGVDRVLHAVSD-----AYNTSSVRDIAVEEAIRI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D+ NK +G+ G++ L D + V+THCN G LA ++GTALGV+RS K
Sbjct: 127 ADEDVKINKQLGKYGSELLDDGDV------VMTHCNAGRLACVDWGTALGVVRSAVEEGK 180
Query: 272 IGAAYCTETRPYNQGAR 288
ETRP NQG+R
Sbjct: 181 SIKVVACETRPLNQGSR 197
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++D+ NK +G+ G++ L D + V+THCN G LA ++GTALGV+RS
Sbjct: 128 DEDVKINKQLGKYGSELLDDGDV------VMTHCNAGRLACVDWGTALGVVRS 174
>gi|262277001|ref|ZP_06054794.1| S-methyl-5-thioribose-1-phosphate isomerase [alpha proteobacterium
HIMB114]
gi|262224104|gb|EEY74563.1| S-methyl-5-thioribose-1-phosphate isomerase [alpha proteobacterium
HIMB114]
Length = 350
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%), Gaps = 9/129 (6%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
Y+ EK+ + +ARPTAVN+ AAD + ++ + +K ++ + + E+DI
Sbjct: 78 YINEKITNIKTARPTAVNLAWAADRILKNIDR-------SNIKNSILNECKKICEEDIKI 130
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
+++IG +G + + + K+N+LTHCN G LAT ++GTA I A +
Sbjct: 131 SESIGNHGLELIRKIKK--EKVNILTHCNAGWLATIDWGTATAPIYKSRDAGINIHVWVD 188
Query: 279 ETRPYNQGA 287
ETRP NQG+
Sbjct: 189 ETRPRNQGS 197
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 38/154 (24%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPD---- 71
I+DQ LP + +N +D + AIK M VRGAP I + + K+ + D
Sbjct: 22 IIDQTKLPFEFIIKKLNTYQDGFVAIKDMLVRGAPLIGATAAYSIYLAAKENENFDYINE 81
Query: 72 --------------------------------NELIQLIESMLEKDISDNKAIGRNGAQA 99
N ++ + + E+DI +++IG +G +
Sbjct: 82 KITNIKTARPTAVNLAWAADRILKNIDRSNIKNSILNECKKICEEDIKISESIGNHGLEL 141
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ + + K+N+LTHCN G LAT ++GTA I
Sbjct: 142 IRKI--KKEKVNILTHCNAGWLATIDWGTATAPI 173
>gi|298528798|ref|ZP_07016202.1| translation initiation factor, aIF-2BI family [Desulfonatronospira
thiodismutans ASO3-1]
gi|298512450|gb|EFI36352.1| translation initiation factor, aIF-2BI family [Desulfonatronospira
thiodismutans ASO3-1]
Length = 336
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG L + + +N + LEK L + ARPTA N+ A
Sbjct: 54 TAAYGCVLAALEARGSSNW-----------EEDLEK----SLQTIEHARPTAANLAWAVR 98
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ + + SP + L + + + E+DI NK IG +G + S V
Sbjct: 99 GMRHAWRSGSFFSPAQLAEFWLPEALH-VHEEDIRINKMIGAHGRDLIF------SGDTV 151
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+THCN G+LAT YGTALGV+RS K ETRP+ QGAR
Sbjct: 152 MTHCNAGALATGGYGTALGVVRSAVEQGKDIRVIANETRPFLQGAR 197
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 73/180 (40%), Gaps = 54/180 (30%)
Query: 4 LQSIIY-EKHS-LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+Q + + EK S L +LDQ LP + + +D A++ M +RGAPAI + G V
Sbjct: 1 MQHVYFDEKQSVLMLLDQRYLPDSEQWFKCAGTQDIVYALQQMVIRGAPAIGVTAAYGCV 60
Query: 62 VDIKDKQFPDN---------------------------------------ELIQLIESML 82
+ + + N QL E L
Sbjct: 61 LAALEARGSSNWEEDLEKSLQTIEHARPTAANLAWAVRGMRHAWRSGSFFSPAQLAEFWL 120
Query: 83 -------EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
E+DI NK IG +G + S V+THCN G+LAT YGTALGV+RS
Sbjct: 121 PEALHVHEEDIRINKMIGAHGRDLIF------SGDTVMTHCNAGALATGGYGTALGVVRS 174
>gi|218527028|sp|A4VLZ8.2|MTNA_PSEU5 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
Length = 358
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E + L ++RPTAVN+ A + ++ L P ++ + I + ES D N
Sbjct: 87 EDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEAQAISIHES----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
A+ + G LI + G + N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 143 AMAQFGVD-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 59/187 (31%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI+ M VRGAPAI I LV
Sbjct: 9 EKVKSIEWHGDRLSLLDQRKLPTEEVWHSCDSAAAVADAIRDMVVRGAPAIGISAAYALV 68
Query: 62 VDIKDKQFPDNELIQLIE------------------------------------------ 79
+ + + + Q +E
Sbjct: 69 LAARTRMAAGGDWRQALEEDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEA 128
Query: 80 ---SMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAEYGTAL 130
S+ E D N A+ + G +DL NP+ N+LTHCNTG+LAT +GTAL
Sbjct: 129 QAISIHESDREANLAMAQFG----VDLIRRHQGNPQ----NLLTHCNTGALATGGFGTAL 180
Query: 131 GVIRSLH 137
GVIR+ H
Sbjct: 181 GVIRAAH 187
>gi|374287017|ref|YP_005034102.1| putative methylthioribose-1-phosphate isomerase [Bacteriovorax
marinus SJ]
gi|301165558|emb|CBW25129.1| putative methylthioribose-1-phosphate isomerase [Bacteriovorax
marinus SJ]
Length = 351
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+YL S+RPTAVN+ D + + A ++ LI + L+ DN A+
Sbjct: 81 EYLNSSRPTAVNLAYELDRCVELIDQLINAGNSEKIEDELISFGHAQLDLIHRDNLAMAN 140
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ LI+ G K ++T CNTG LA GTALGVI L + I Y +ETRPY
Sbjct: 141 IAMKDLIE-RFGKRKYRIMTLCNTGYLACGPMGTALGVISHLFENDLIEHVYASETRPYM 199
Query: 285 QGAR 288
QGAR
Sbjct: 200 QGAR 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 61/224 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL- 60
K + + ++ L +LDQ LP +V+ +EDAY +IK M VRGAP I G G+
Sbjct: 3 KVVSPLSWKDGVLSLLDQRKLPLEEIIVENKTIEDAYNSIKDMVVRGAPLIGYTGIFGMA 62
Query: 61 --------------------------------------------VVDIKDKQFPDNELIQ 76
+++ + + ++ELI
Sbjct: 63 LFARGNRGASIDEYKKAAEYLNSSRPTAVNLAYELDRCVELIDQLINAGNSEKIEDELIS 122
Query: 77 LIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ L+ DN A+ + LI+ + K ++T CNTG LA GTALGVI L
Sbjct: 123 FGHAQLDLIHRDNLAMANIAMKDLIERFGK-RKYRIMTLCNTGYLACGPMGTALGVISHL 181
Query: 137 HGANKIVDIKDKQFPDNDSLEK-YVGEKLDYLVSARPTAVNMKR 179
+ND +E Y E Y+ AR T+ +K+
Sbjct: 182 F--------------ENDLIEHVYASETRPYMQGARLTSYELKK 211
>gi|386020972|ref|YP_005938996.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri DSM
4166]
gi|327480944|gb|AEA84254.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri DSM
4166]
Length = 358
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E + L ++RPTAVN+ A + ++ L P ++ + I + ES D N
Sbjct: 87 EDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEAQAISIHES----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
A+ + G LI + G + N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 143 AMAQFGVD-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 59/187 (31%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI++M VRGAPAI I LV
Sbjct: 9 EKVKSIEWHGDRLSLLDQRKLPTEEVWHSCDSAAAVADAIRNMVVRGAPAIGISAAYALV 68
Query: 62 VDIKDKQFPDNELIQLIE------------------------------------------ 79
+ + + + Q +E
Sbjct: 69 LAARTRMTAGGDWRQALEEDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEA 128
Query: 80 ---SMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAEYGTAL 130
S+ E D N A+ + G +DL NP+ N+LTHCNTG+LAT +GTAL
Sbjct: 129 QAISIHESDREANLAMAQFG----VDLIRRHQGNPQ----NLLTHCNTGALATGGFGTAL 180
Query: 131 GVIRSLH 137
GVIR+ H
Sbjct: 181 GVIRAAH 187
>gi|300114705|ref|YP_003761280.1| aIF-2BI family translation initiation factor [Nitrosococcus
watsonii C-113]
gi|299540642|gb|ADJ28959.1| translation initiation factor, aIF-2BI family [Nitrosococcus
watsonii C-113]
Length = 348
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTA+N+ A +++ + + + + L+ + ++DI+ N+ +G G
Sbjct: 90 LEAARPTAINLAWALTRMRAIVHDLPDH---HDPEIALLAEARRIHKEDIAANRRMGELG 146
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
ALI+ GV LTHCNTGSLAT +GTALGVIR + +I + ETRP+ QG
Sbjct: 147 T-ALIEGAAGV-----LTHCNTGSLATGGFGTALGVIRHAYSKGRIAKVFADETRPWLQG 200
Query: 287 AR 288
AR
Sbjct: 201 AR 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 62/127 (48%), Gaps = 19/127 (14%)
Query: 51 AIAIVGCLGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL 110
A A+ +V D+ D P+ L+ + ++DI+ N+ +G G ALI+
Sbjct: 101 AWALTRMRAIVHDLPDHHDPEIALLAEARRIHKEDIAANRRMGELGT-ALIE-----GAA 154
Query: 111 NVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSA 170
VLTHCNTGSLAT +GTALGVIR + +I K F D E +L A
Sbjct: 155 GVLTHCNTGSLATGGFGTALGVIRHAYSKGRIA----KVFAD---------ETRPWLQGA 201
Query: 171 RPTAVNM 177
R TA +
Sbjct: 202 RLTAWEL 208
>gi|147919557|ref|YP_686703.1| translation initiation factor IF-2B subunit alpha [Methanocella
arvoryzae MRE50]
gi|110622099|emb|CAJ37377.1| translation initiation factor 2B, subunit 1 [Methanocella arvoryzae
MRE50]
Length = 342
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +ARPTAVN+ + V L A V ++ ++ + + E D+ + IG +G
Sbjct: 85 LKNARPTAVNLSWGVERV---LDRALDADNVQDIRNIALEEAKMLAEDDVQRCREIGMHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L D + VLTHCN G LA ++GTALGVIRS A K ETRP NQG
Sbjct: 142 AELLKDGD------TVLTHCNAGRLACVDWGTALGVIRSAVEAGKNIKVISCETRPLNQG 195
Query: 287 AR 288
+R
Sbjct: 196 SR 197
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+ E D+ + IG +GA+ L D + VLTHCN G LA ++GTALGVIRS A
Sbjct: 126 LAEDDVQRCREIGMHGAELLKDGD------TVLTHCNAGRLACVDWGTALGVIRSAVEAG 179
Query: 141 K 141
K
Sbjct: 180 K 180
>gi|55981041|ref|YP_144338.1| translation initiation factor, aIF-2B subunit alpha-like protein
[Thermus thermophilus HB8]
gi|384431259|ref|YP_005640619.1| Methylthioribose-1-phosphate isomerase [Thermus thermophilus
SG0.5JP17-16]
gi|386360428|ref|YP_006058673.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermus thermophilus
JL-18]
gi|81364173|sp|Q5SJE2.1|MTNA_THET8 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|55772454|dbj|BAD70895.1| translation initiation factor, aIF-2B alpha subunit-related protein
[Thermus thermophilus HB8]
gi|333966727|gb|AEG33492.1| Methylthioribose-1-phosphate isomerase [Thermus thermophilus
SG0.5JP17-16]
gi|383509455|gb|AFH38887.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermus thermophilus
JL-18]
Length = 330
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 54/218 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------D 63
E+ +LDQ LP V + + QAI+ M VRGAPAI + G+V+ D
Sbjct: 12 EEGVFWLLDQRRLPQEEVYVPVRTAREMAQAIRDMVVRGAPAIGVSAAFGMVLAHLAGED 71
Query: 64 IKD----------------------KQFPDNELIQLIESM-LEKDISDNKA-IGRNGAQA 99
+++ + F + L+E+ + +++ + +A I R+GAQ
Sbjct: 72 LEEADRRLRASRPTAVNLFHALDRMRPFWGDLAGSLLEARRIWREVEETEAAISRHGAQV 131
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKY 159
L VLTHCNTG LAT YGTALG I + ++ + +
Sbjct: 132 LWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHV-------------W 170
Query: 160 VGEKLDYLVSARPTAVNMKRA---ADSVKSSLSEWAKA 194
V E YL AR TA +++A A + ++ W A
Sbjct: 171 VDETRPYLQGARLTAYELQKAGVPATLITDGMAGWLMA 208
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM-LEKDISDNKA-IGR 224
L ++RPTAVN+ A D ++ + A + L+E+ + +++ + +A I R
Sbjct: 79 LRASRPTAVNLFHALDRMRPFWGDLAGS------------LLEARRIWREVEETEAAISR 126
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+GAQ L VLTHCNTG LAT YGTALG I + ++ + ETRPY
Sbjct: 127 HGAQVLWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHVWVDETRPYL 178
Query: 285 QGAR 288
QGAR
Sbjct: 179 QGAR 182
>gi|430750851|ref|YP_007213759.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermobacillus
composti KWC4]
gi|430734816|gb|AGA58761.1| S-methyl-5-thioribose-1-phosphate isomerase [Thermobacillus
composti KWC4]
Length = 354
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 86/168 (51%), Gaps = 28/168 (16%)
Query: 126 YGTALGVIRSLH-GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV 184
YG LG +++H G N ++ +++++ G YL ++RPTAVN+ A D +
Sbjct: 62 YGVVLGSAKAVHAGTNAWLE----------AVKRHAG----YLATSRPTAVNLFWALDRM 107
Query: 185 KSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ A + +P + + L++ E++ +DI N+ IG + L D + VL
Sbjct: 108 TARAEALAASGAPAESCQEALVREAEAIHAEDIETNRLIGEHALTLLAD------GMGVL 161
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIG---AAYCTETRPYNQGAR 288
THCN G LATA+YGTAL + A + G + ETRP QGAR
Sbjct: 162 THCNAGGLATAKYGTALA---PFYLAAERGIKLRVFADETRPVLQGAR 206
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 74 LIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTAL 130
L++ E++ +DI N+ IG + L D + VLTHCN G LATA+YGTAL
Sbjct: 128 LVREAEAIHAEDIETNRLIGEHALTLLAD------GMGVLTHCNAGGLATAKYGTAL 178
>gi|57234720|ref|YP_181262.1| aIF-2BI family translation initiation factor [Dehalococcoides
ethenogenes 195]
gi|123618880|sp|Q3Z937.1|MTNA_DEHE1 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|57225168|gb|AAW40225.1| translation initiation factor, putative, aIF-2BI family
[Dehalococcoides ethenogenes 195]
Length = 334
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
+ S RPTA N+ AA+ + + A + V+ VK L++ + ++ ++ I G
Sbjct: 83 IASTRPTAKNLFMAAERMDHVV---ASGTDVSQVKISLVEEAVKIHHEEEEASRKISAFG 139
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ + PG VLTHCN G LATA YGTALGVI + H K +A+ TETRP QG
Sbjct: 140 AELI---QPG---WTVLTHCNAGPLATAGYGTALGVIIAAHQQGKNISAFATETRPLLQG 193
Query: 287 AR 288
AR
Sbjct: 194 AR 195
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAI-------VG 56
+++I + + L ILDQ LLP K +++N+ +AIK+++VRGAP+I + +G
Sbjct: 1 MKAIEWRDNRLIILDQTLLPLEEKYLELNDYHAVAEAIKTLRVRGAPSIGVAAAYGIALG 60
Query: 57 CLGLVVDIKDKQFPDNELIQLIES-------------MLEKDISDNKAIGRNGAQALIDL 103
LG+ + P L Q + + M + + A G + +Q I L
Sbjct: 61 ALGIETQYCSEFLP---LYQQVSAEIASTRPTAKNLFMAAERMDHVVASGTDVSQVKISL 117
Query: 104 NPRVSKLN-----------------------VLTHCNTGSLATAEYGTALGVIRSLHGAN 140
K++ VLTHCN G LATA YGTALGVI + H
Sbjct: 118 VEEAVKIHHEEEEASRKISAFGAELIQPGWTVLTHCNAGPLATAGYGTALGVIIAAHQQG 177
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
K ++ + E L AR TA+ +K A K
Sbjct: 178 K-------------NISAFATETRPLLQGARLTALELKEAGIPFK 209
>gi|383762726|ref|YP_005441708.1| methylthioribose-1-phosphate isomerase [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381382994|dbj|BAL99810.1| methylthioribose-1-phosphate isomerase [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 357
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
AT YG AL S Q D +L + + L +ARPTAVN+ A
Sbjct: 55 ATGAYGMALAAFHS-------------QATDRAALLEDLRRAKATLDAARPTAVNLSWAT 101
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLN 241
D + + + A+ + V ++ L+ ++ ++D+ N+ +G +GA + D N
Sbjct: 102 DRMLACAAS-AQVATVEELRHLLLAEANAIADEDVEINRRLGFHGAALIKD------GAN 154
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
+L HCNTGSLAT +GTALGVI + K + ETRP QGAR
Sbjct: 155 LLHHCNTGSLATVGFGTALGVIYACAEQGKRVHVWVDETRPRLQGAR 201
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 89/225 (39%), Gaps = 67/225 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++S+ ++ + ++DQ LLP + + VE AI+ M VRGAPAI G G+ +
Sbjct: 5 VRSVFWQDQKVMLIDQRLLPGQFVVAAFDTVEAVAGAIRDMVVRGAPAIGATGAYGMALA 64
Query: 64 IKDKQFPD--------------------------------------------NELIQLI- 78
Q D EL L+
Sbjct: 65 AFHSQATDRAALLEDLRRAKATLDAARPTAVNLSWATDRMLACAASAQVATVEELRHLLL 124
Query: 79 ---ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ ++D+ N+ +G +GA + D N+L HCNTGSLAT +GTALGVI +
Sbjct: 125 AEANAIADEDVEINRRLGFHGAALIKD------GANLLHHCNTGSLATVGFGTALGVIYA 178
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRA 180
K V + +V E L AR TA + RA
Sbjct: 179 CAEQGKRVHV-------------WVDETRPRLQGARLTAWELMRA 210
>gi|254467788|ref|ZP_05081194.1| methylthioribose-1-phosphate isomerase [beta proteobacterium KB13]
gi|207086598|gb|EDZ63881.1| methylthioribose-1-phosphate isomerase [beta proteobacterium KB13]
Length = 348
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 95/210 (45%), Gaps = 49/210 (23%)
Query: 2 KSLQSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL- 58
++ Q+I ++ + K+ +DQ LLP + ++ ED AIK+MQVRGAP I I G L
Sbjct: 6 QNYQTIWLDRENSKVFFIDQALLPFEFSIRSTSHHEDLINAIKTMQVRGAPVIGITGALA 65
Query: 59 ---GLVVDIKDKQFPD----------------------NELIQLI-------------ES 80
G+ +D D + N IQ I E
Sbjct: 66 LLLGMSLDSSDVNLNNLSQEIIKARPTAVNLAWAVNSMNGEIQKIPQERRLDFAWNYAEK 125
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
+++ DI N IG +G Q +ID N N+LTHCN G LAT ++GTAL I N
Sbjct: 126 LIQNDIQCNHQIGVHGGQLIIDNNYN----NILTHCNAGWLATVDHGTALSPIFEAFKNN 181
Query: 141 KIVDIK-DKQFPDNDSL---EKYVGEKLDY 166
+ + + D+ P N L + + EK+ Y
Sbjct: 182 QNIHVWVDETRPRNQGLLTCWELMNEKIPY 211
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
++ ARPTAVN+ A +S+ + + + ++ E +++ DI N IG +G
Sbjct: 86 IIKARPTAVNLAWAVNSMNGEIQKIPQERRLDFAW----NYAEKLIQNDIQCNHQIGVHG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
Q +ID N N+LTHCN G LAT ++GTAL I N+ + ETRP NQG
Sbjct: 142 GQLIIDNNYN----NILTHCNAGWLATVDHGTALSPIFEAFKNNQNIHVWVDETRPRNQG 197
>gi|49086588|gb|AAT51365.1| PA3169, partial [synthetic construct]
Length = 359
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKA-SPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
L +RPTAVN+ A + ++ L + P+ ++ I + ES D N + +
Sbjct: 92 LADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLEAEAISIHES----DREANLTMAQL 147
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G + LI G S N+LTHCNTG+LAT +GTALGVIR+ H + Y ETRP+ Q
Sbjct: 148 GME-LIRKQQG-SPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIYADETRPWLQ 205
Query: 286 GAR 288
G+R
Sbjct: 206 GSR 208
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L++LDQ LLP ++ + + +AI+ M VRGAPAI I G+V
Sbjct: 9 ERVKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGIV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ + + + +E + ++D++ N AL + R+ ++
Sbjct: 69 LGARARLAQGGDWRAALEGDF-RLLADSRPTAVNLFWALNRMRDRLERMKEGDQPLAVLE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AEAISIHESDREANLTMAQLGMELIRKQQGSPQNILTHCNTGALATGGFGTALGVIRAAH 187
>gi|429214716|ref|ZP_19205879.1| methylthioribose-1-phosphate isomerase [Pseudomonas sp. M1]
gi|428155002|gb|EKX01552.1| methylthioribose-1-phosphate isomerase [Pseudomonas sp. M1]
Length = 358
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
L +RPTAVN+ A + ++ L P+ ++ I + ES D N + +
Sbjct: 92 LAESRPTAVNLFWALNRMRERLERLKPGDDPLQVLEAEAIAIHES----DREANLTMAQL 147
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G + + + G K +LTHCNTG+LAT +GTALGVIR+ H + Y ETRP+ Q
Sbjct: 148 GVELIRKQHSGPQK--ILTHCNTGALATGGFGTALGVIRAAHLEGLVERIYADETRPWLQ 205
Query: 286 GAR 288
GAR
Sbjct: 206 GAR 208
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 83/181 (45%), Gaps = 47/181 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ + +I + K +L++LDQ LLP + ++ +AI+ M VRGAPAI I GLV
Sbjct: 9 ERVTAIDWRKGTLRLLDQRLLPLEETWLSYDSAAGVAEAIRQMVVRGAPAIGIAAAYGLV 68
Query: 62 VDIK-----------------------------------------DKQFPDNELIQLIES 80
+ ++ ++ P ++ +Q++E+
Sbjct: 69 LGLQARLNNGGAWREALEDDFRVLAESRPTAVNLFWALNRMRERLERLKPGDDPLQVLEA 128
Query: 81 ----MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ E D N + + G + + + K +LTHCNTG+LAT +GTALGVIR+
Sbjct: 129 EAIAIHESDREANLTMAQLGVELIRKQHSGPQK--ILTHCNTGALATGGFGTALGVIRAA 186
Query: 137 H 137
H
Sbjct: 187 H 187
>gi|383775071|ref|YP_005454140.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium sp. S23321]
gi|381363198|dbj|BAL80028.1| methylthioribose-1-phosphate isomerase [Bradyrhizobium sp. S23321]
Length = 368
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 68/126 (53%), Gaps = 8/126 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D LV ARPTA+N+K A D + ++L A PV +T + E + E+D+ N+ I
Sbjct: 84 DTLVVARPTAINLKWALDEMHAAL---APIDPVERAETAYSRADE-IAEQDVEINRGIAD 139
Query: 225 NG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
NG +A+ PG +N+LTHCN G LAT ++GTA I H + ETR
Sbjct: 140 NGLKLIEAIAAKKPG-EVVNLLTHCNAGWLATVDWGTATAPIYLAHERGIKVHVWVDETR 198
Query: 282 PYNQGA 287
P NQGA
Sbjct: 199 PRNQGA 204
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K +SI E+ I +DQ LPH + + + EDA AI+ M VRGAP I G
Sbjct: 6 KHFRSIWRERDGWAIGAIDQRRLPHEFVVARLTSCEDAAVAIRDMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKDK-----------------------QFPDNEL------IQLIE----------S 80
+ + +++ ++ +E+ I +E
Sbjct: 66 MALAMREDASDAGLKRAYDTLVVARPTAINLKWALDEMHAALAPIDPVERAETAYSRADE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ E+D+ N+ I NG +A+ P +N+LTHCN G LAT ++GTA I H
Sbjct: 126 IAEQDVEINRGIADNGLKLIEAIAAKKPG-EVVNLLTHCNAGWLATVDWGTATAPIYLAH 184
>gi|431930671|ref|YP_007243717.1| S-methyl-5-thioribose-1-phosphate isomerase [Thioflavicoccus
mobilis 8321]
gi|431828974|gb|AGA90087.1| S-methyl-5-thioribose-1-phosphate isomerase [Thioflavicoccus
mobilis 8321]
Length = 352
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 70/125 (56%), Gaps = 10/125 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L L +ARPTA+N+ A + + ++ + P + L+ ++ ++D + N+ +G
Sbjct: 91 LAQLAAARPTAINLFWALERMGQRIATLDEGDP----EPALLAEARAIHDEDRAGNRRMG 146
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
GA+ LI+ + V+THCN G+LAT YGTALGV+R+ +I Y ETRP+
Sbjct: 147 ELGAE-LIE-----TPTEVITHCNAGALATGGYGTALGVVRAGFAVGRIRHVYADETRPW 200
Query: 284 NQGAR 288
QG R
Sbjct: 201 MQGTR 205
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 58 LGLVVDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCN 117
+G + D+ P+ L+ ++ ++D + N+ +G GA+ LI+ + V+THCN
Sbjct: 111 MGQRIATLDEGDPEPALLAEARAIHDEDRAGNRRMGELGAE-LIE-----TPTEVITHCN 164
Query: 118 TGSLATAEYGTALGVIRSLHGANKI 142
G+LAT YGTALGV+R+ +I
Sbjct: 165 AGALATGGYGTALGVVRAGFAVGRI 189
>gi|339445229|ref|YP_004711233.1| translation initiation factor eIF-2B subunit alpha [Eggerthella sp.
YY7918]
gi|338904981|dbj|BAK44832.1| translation initiation factor eIF-2B alpha subunit [Eggerthella sp.
YY7918]
Length = 361
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 162 EKLDY----LVSARPTAVNMKRAADSVKSSLSEW-AKASPVNTVKTRLIQLIESMLEKDI 216
E+LD +V ARPTAVN+ K E A+ S L L++ + D
Sbjct: 98 EELDTVAEEIVRARPTAVNLAWGVRLAKERAREAIAEGSSPEEAADDLFALVKRLEADDE 157
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
N+++G +GA L VLTHCN GSLAT YGTALGV+ + I Y
Sbjct: 158 KTNRSLGAHGASLL------PPNARVLTHCNAGSLATVFYGTALGVVYAAAAQGNIARVY 211
Query: 277 CTETRPYNQGAR 288
ETRP QGAR
Sbjct: 212 ADETRPVGQGAR 223
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
++L L++ + D N+++G +GA +L+ N RV LTHCN GSLAT YGTALG
Sbjct: 143 DDLFALVKRLEADDEKTNRSLGAHGA-SLLPPNARV-----LTHCNAGSLATVFYGTALG 196
Query: 132 VI 133
V+
Sbjct: 197 VV 198
>gi|381190638|ref|ZP_09898156.1| translation initiation factor, aIF-2B subunit alpha-like protein
[Thermus sp. RL]
gi|380451521|gb|EIA39127.1| translation initiation factor, aIF-2B subunit alpha-like protein
[Thermus sp. RL]
Length = 327
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 54/218 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------D 63
E+ +LDQ LP V + + QAI+ M VRGAPAI + G+V+ D
Sbjct: 9 EEGVFWLLDQRRLPQEEVYVPVRTAREMAQAIRDMVVRGAPAIGVSAAFGMVLAHLAGED 68
Query: 64 IKD----------------------KQFPDNELIQLIESM-LEKDISDNKA-IGRNGAQA 99
+++ + F + L+E+ + +++ + +A I R+GAQ
Sbjct: 69 LEEADRRLRASRPTAVNLFHALDRMRPFWGDLAGSLLEARRIWREVEETEAAISRHGAQV 128
Query: 100 LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKY 159
L VLTHCNTG LAT YGTALG I + ++ + +
Sbjct: 129 LWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHV-------------W 167
Query: 160 VGEKLDYLVSARPTAVNMKRA---ADSVKSSLSEWAKA 194
V E YL AR TA +++A A + ++ W A
Sbjct: 168 VDETRPYLQGARLTAYELQKAGVPATLITDGMAGWLMA 205
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM-LEKDISDNKA-IGR 224
L ++RPTAVN+ A D ++ + A + L+E+ + +++ + +A I R
Sbjct: 76 LRASRPTAVNLFHALDRMRPFWGDLAGS------------LLEARRIWREVEETEAAISR 123
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+GAQ L VLTHCNTG LAT YGTALG I + ++ + ETRPY
Sbjct: 124 HGAQVLWG--------QVLTHCNTGPLATGGYGTALGAIVEAYRLGRVRHVWVDETRPYL 175
Query: 285 QGAR 288
QGAR
Sbjct: 176 QGAR 179
>gi|254446969|ref|ZP_05060436.1| methylthioribose-1-phosphate isomerase [gamma proteobacterium
HTCC5015]
gi|198263108|gb|EDY87386.1| methylthioribose-1-phosphate isomerase [gamma proteobacterium
HTCC5015]
Length = 347
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D ++ + L ARPTAVN++ A +++ +A + L+Q + +
Sbjct: 77 DQWKEALEPDFARLNRARPTAVNLRWALQRMQT-----VEAGDARGLIDNLLQEADQIRL 131
Query: 214 KDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIG 273
+++ N A+ GA ALI N V+THCNTG+LAT GTALGVIR H K+
Sbjct: 132 EEVEANAAMSAYGA-ALIAPNS-----TVITHCNTGTLATTGAGTALGVIRHAHREGKLH 185
Query: 274 AAYCTETRPYNQGAR 288
Y ETRP+ QGAR
Sbjct: 186 RVYAGETRPWLQGAR 200
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 19/114 (16%)
Query: 72 NELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ L+Q + + +++ N A+ GA ALI N V+THCNTG+LAT GTALG
Sbjct: 120 DNLLQEADQIRLEEVEANAAMSAYGA-ALIAPNS-----TVITHCNTGTLATTGAGTALG 173
Query: 132 VIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
VIR H K+ + Y GE +L AR TA ++++ V+
Sbjct: 174 VIRHAHREGKLHRV-------------YAGETRPWLQGARLTAWELQQSGIDVR 214
>gi|313200639|ref|YP_004039297.1| translation initiation factor, aif-2bi family [Methylovorus sp.
MP688]
gi|312439955|gb|ADQ84061.1| translation initiation factor, aIF-2BI family [Methylovorus sp.
MP688]
Length = 346
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 48/187 (25%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNE 73
++I+DQ LPH ++ I++V++ AIK MQVRGAP I G+ + I D D +
Sbjct: 1 MEIIDQTQLPHRLHILRIDSVDEMVHAIKHMQVRGAPLIGAAAAYGMALGIVDSAL-DGD 59
Query: 74 LIQLIESMLE----------------------------------------KDISDNKAIG 93
+ ++ E++L+ +D++ N+AIG
Sbjct: 60 VERIGETLLQSRPTAVNLRWAVQRMQRVLLALPVEERAVAAWREAAVICDEDVALNQAIG 119
Query: 94 RNG---AQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK- 146
++G +AL R S L +LTHCN G LAT ++GTAL I + H A V +
Sbjct: 120 QHGLSMLRALATARGRGSAAQPLQILTHCNAGWLATVDWGTALAPIYAAHEAGLAVHVWV 179
Query: 147 DKQFPDN 153
D+ P N
Sbjct: 180 DETRPRN 186
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A A YG ALG++ S +L+ V + L+ +RPTAVN++ A
Sbjct: 41 AAAAYGMALGIVDS-------------------ALDGDVERIGETLLQSRPTAVNLRWAV 81
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL------NP 235
++ L A PV + + ++D++ N+AIG++G L L
Sbjct: 82 QRMQRVL----LALPVEERAVAAWREAAVICDEDVALNQAIGQHGLSMLRALATARGRGS 137
Query: 236 GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
L +LTHCN G LAT ++GTAL I + H A + ETRP NQGA
Sbjct: 138 AAQPLQILTHCNAGWLATVDWGTALAPIYAAHEAGLAVHVWVDETRPRNQGA 189
>gi|392421538|ref|YP_006458142.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri CCUG
29243]
gi|390983726|gb|AFM33719.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri CCUG
29243]
Length = 358
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQL 207
+ D + + E L +RPTAVN+ A + ++ L P ++ + I +
Sbjct: 74 RIADGGDWRQALEEDFKVLADSRPTAVNLFWALNQMRERLDRLKPGEDPYAALEAQAISI 133
Query: 208 IESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
+S D N A+ + G LI + G + N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 134 HDS----DREANLAMAQFGVD-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAH 187
Query: 268 GANKIGAAYCTETRPYNQGAR 288
+ Y ETRP+ QG+R
Sbjct: 188 LEGLVERVYVDETRPWLQGSR 208
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 45/180 (25%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI+ M VRGAPAI I GLV
Sbjct: 9 EKVKSIEWLDGRLNLLDQRKLPVEEIWCSHDSAASVAAAIRDMVVRGAPAIGISAAYGLV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ + + + Q +E K ++D++ N AL + R+ +L
Sbjct: 69 LAVGARIADGGDWRQALEEDF-KVLADSRPTAVNLFWALNQMRERLDRLKPGEDPYAALE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AQAISIHDSDREANLAMAQFGVDLIRRHQGNPQNLLTHCNTGALATGGFGTALGVIRAAH 187
>gi|387126838|ref|YP_006295443.1| Methylthioribose-1-phosphate isomerase [Methylophaga sp. JAM1]
gi|386273900|gb|AFI83798.1| Methylthioribose-1-phosphate isomerase [Methylophaga sp. JAM1]
Length = 350
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 15/130 (11%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKS---SLSEWAKASPVNTVKTRLIQLIESMLEKDISD 218
E L L ++RPTAVN+ A + + + +L E SP + L++ + ++DI+
Sbjct: 85 EPLAKLAASRPTAVNLSWAIEQMTAIYVNLPE--TYSP----EKALLEAATHIHQQDIAA 138
Query: 219 NKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
N+ +G+ GA LID + VLTHCN G+LAT GTALGVI + KI Y
Sbjct: 139 NQTMGKLGAD-LIDPDS-----MVLTHCNAGALATGGVGTALGVISQGYSDGKIKHVYVD 192
Query: 279 ETRPYNQGAR 288
ETRP+ QGAR
Sbjct: 193 ETRPWLQGAR 202
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 89/220 (40%), Gaps = 65/220 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
+Q I ++ L +LDQ LLP ++ + + AI+ M VRGAPAI I +V
Sbjct: 8 IQPIKWQDQQLHLLDQRLLPTQQLWLNYEHASEVSNAIRDMVVRGAPAIGITAAYAVVLA 67
Query: 62 --------------------------------------------VDIKDKQFPDNELIQL 77
V++ + P+ L++
Sbjct: 68 AREAWNKAGVNWKQAMYEPLAKLAASRPTAVNLSWAIEQMTAIYVNLPETYSPEKALLEA 127
Query: 78 IESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ ++DI+ N+ +G+ GA LID + V LTHCN G+LAT GTALGVI +
Sbjct: 128 ATHIHQQDIAANQTMGKLGAD-LIDPDSMV-----LTHCNAGALATGGVGTALGVISQGY 181
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNM 177
KI + YV E +L AR TA +
Sbjct: 182 SDGKIKHV-------------YVDETRPWLQGARLTAWEL 208
>gi|217979474|ref|YP_002363621.1| translation initiation factor, aIF-2BI family [Methylocella
silvestris BL2]
gi|254813654|sp|B8ES44.1|MTNA_METSB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|217504850|gb|ACK52259.1| translation initiation factor, aIF-2BI family [Methylocella
silvestris BL2]
Length = 366
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 43/184 (23%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK------- 65
S+KI+DQ LPH +++ I++VE A +AI M VRGAP I + GL + ++
Sbjct: 19 SIKIIDQTRLPHRFEIIAISDVEAAARAIAEMWVRGAPLIGVTAAYGLALAMRADPSDAN 78
Query: 66 ----------------DKQFPDNELIQLIES----------------MLEKDISDNKAIG 93
+ Q+ + + +LIES + DI+ +AIG
Sbjct: 79 LERASAHLKATRPTAVNLQWAVDRVRRLIESAPPPQRFAAAFAEAGVIARDDIALCEAIG 138
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQ 149
+G + + P + +NVLTHCN G LAT ++GTA + H A V + D+
Sbjct: 139 MHGLSLIKTIAAGKPPGAPVNVLTHCNAGWLATVDWGTATAPVYKAHDAGLAVHVYVDET 198
Query: 150 FPDN 153
P N
Sbjct: 199 RPRN 202
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 26/168 (15%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG AL + + P + +LE+ +L + RPTAVN++ A D
Sbjct: 61 TAAYGLALAM---------------RADPSDANLERASA----HLKATRPTAVNLQWAVD 101
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL---NPGVSK 239
V+ + A P + + DI+ +AIG +G + + P +
Sbjct: 102 RVRRLIE---SAPPPQRFAAAFAEA-GVIARDDIALCEAIGMHGLSLIKTIAAGKPPGAP 157
Query: 240 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+NVLTHCN G LAT ++GTA + H A Y ETRP NQGA
Sbjct: 158 VNVLTHCNAGWLATVDWGTATAPVYKAHDAGLAVHVYVDETRPRNQGA 205
>gi|193214358|ref|YP_001995557.1| translation initiation factor, aIF-2BI family [Chloroherpeton
thalassium ATCC 35110]
gi|193087835|gb|ACF13110.1| translation initiation factor, aIF-2BI family [Chloroherpeton
thalassium ATCC 35110]
Length = 366
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 5/141 (3%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
+ DS + Y + + + ++RPTAVN+ A + +++ S + +K ++ +
Sbjct: 68 EKDSFKAYFDKIIAEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHILNEAICI 127
Query: 212 LEKDISDNKAIGRNGAQALIDLNPG----VSKLNVLTHCNTGSLATAEYGTALGVIRSLH 267
++I++ + + R+G ALI + G KLNVLTHCNTG+LAT GTALGVI+ +
Sbjct: 128 HNEEIANCENMARHGV-ALIQKDLGHILEKRKLNVLTHCNTGTLATGGLGTALGVIKQAY 186
Query: 268 GANKIGAAYCTETRPYNQGAR 288
I Y +E+RP QG R
Sbjct: 187 KDGLIEKVYTSESRPLLQGLR 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 53/186 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I + + L+ LDQ LP V+ + A +AIK++ VRGAP I + +V+
Sbjct: 2 IDAISFGNNKLRYLDQRFLPLQENYVETADYLQAIEAIKTLAVRGAPLIGVAAGYTVVLA 61
Query: 64 I------KD-----------------------------------KQFPDNELIQLIESML 82
+ KD K+F ++ + +L E +L
Sbjct: 62 VQCFDGEKDSFKAYFDKIIAEVEASRPTAVNLFFATAKMNEVVAKRFAESSMAELKEHIL 121
Query: 83 EK-------DISDNKAIGRNGAQALI--DLNPRVSK--LNVLTHCNTGSLATAEYGTALG 131
+ +I++ + + R+G ALI DL + K LNVLTHCNTG+LAT GTALG
Sbjct: 122 NEAICIHNEEIANCENMARHGV-ALIQKDLGHILEKRKLNVLTHCNTGTLATGGLGTALG 180
Query: 132 VIRSLH 137
VI+ +
Sbjct: 181 VIKQAY 186
>gi|328866225|gb|EGG14610.1| translation initiation factor eIF-2B alpha subunit [Dictyostelium
fasciculatum]
Length = 352
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 50/211 (23%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
SI Y+ L+ILDQ LP + ++ ED IK + VRGAP I + + L V ++
Sbjct: 9 SIRYKDEKLEILDQRRLPDIEEWMESKTPEDMITYIKQLSVRGAPLIGVAASVALFVYVR 68
Query: 66 DKQFPDNELI-----QL-------------IESMLE--------KDISDNK--AIGRNGA 97
D D + I QL I++M++ +D S K + +
Sbjct: 69 DHPDADRKTIVEVSDQLRNARPTAVNLMNNIDTMIQLSQPDQDKRDYSAEKMAELAYSIV 128
Query: 98 QALIDLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDK 148
+A +++ R+S+ +LTHCNTG +AT GTALGVIR+ H A K + +
Sbjct: 129 EAEVEMCRRMSEFGAELVQQGEGILTHCNTGGVATPGMGTALGVIRAAHRAGKQIHV--- 185
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
YV E L R T ++R
Sbjct: 186 ----------YVDETRPLLQGGRLTTYELER 206
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 148 KQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS-VKSSLSEWAKASPVNTVKTRLIQ 206
+ PD D K + E D L +ARPTAVN+ D+ ++ S + K + ++ +
Sbjct: 68 RDHPDAD--RKTIVEVSDQLRNARPTAVNLMNNIDTMIQLSQPDQDKR---DYSAEKMAE 122
Query: 207 LIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSL 266
L S++E ++ + + GA+ L+ G+ LTHCNTG +AT GTALGVIR+
Sbjct: 123 LAYSIVEAEVEMCRRMSEFGAE-LVQQGEGI-----LTHCNTGGVATPGMGTALGVIRAA 176
Query: 267 HGANKIGAAYCTETRPYNQGAR 288
H A K Y ETRP QG R
Sbjct: 177 HRAGKQIHVYVDETRPLLQGGR 198
>gi|258645358|ref|ZP_05732827.1| S-methyl-5-thioribose-1-phosphate isomerase [Dialister invisus DSM
15470]
gi|260402707|gb|EEW96254.1| S-methyl-5-thioribose-1-phosphate isomerase [Dialister invisus DSM
15470]
Length = 351
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D ++EK D + ARPTAVN+ A D + K + + + L++ +
Sbjct: 72 DIATIEKRFLYAADTMKMARPTAVNLFWAVDEMIKVF----KNTKLENIYGALLRKANEI 127
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
+D I GA D+ G L +LTHCN G+LATA GTALGVI LH +
Sbjct: 128 ERQDKEICSRIADQGA----DIFKGKKHLKILTHCNAGALATAGIGTALGVITRLHQHGQ 183
Query: 272 IGAAYCTETRPYNQGAR 288
+ Y ETRP QGAR
Sbjct: 184 LSCVYVDETRPLLQGAR 200
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 13/68 (19%)
Query: 110 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVS 169
L +LTHCN G+LATA GTALGVI LH ++ + YV E L
Sbjct: 152 LKILTHCNAGALATAGIGTALGVITRLHQHGQLSCV-------------YVDETRPLLQG 198
Query: 170 ARPTAVNM 177
AR TAV +
Sbjct: 199 ARLTAVEL 206
>gi|421849209|ref|ZP_16282192.1| translation initiation factor alpha subunit [Acetobacter
pasteurianus NBRC 101655]
gi|371460016|dbj|GAB27395.1| translation initiation factor alpha subunit [Acetobacter
pasteurianus NBRC 101655]
Length = 376
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 42/170 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV----DIK 65
++ S+ I DQ LP + ++ + V+D AI SMQVRGAP I V GL + D
Sbjct: 28 DQWSIHIFDQTRLPFSLDILRLTTVQDVAHAITSMQVRGAPLIGAVAAYGLALALRTDSS 87
Query: 66 DKQFPDN------------ELIQLIESML-----------------------EKDISDNK 90
+ N L +E ML ++D + N+
Sbjct: 88 NTSLEQNAAMLAATRPTAINLRWALERMLNTLRPIPPENRVSAAYAEALHICDEDAAQNE 147
Query: 91 AIGRNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
AIG++G + L DL + +LN+LTHCN G +AT ++GTAL I H
Sbjct: 148 AIGKHGLKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAH 197
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
N SLE+ L + RPTA+N++ A + + ++L P N V + + +
Sbjct: 88 NTSLEQNAA----MLAATRPTAINLRWALERMLNTLR---PIPPENRVSAAYAEALH-IC 139
Query: 213 EKDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
++D + N+AIG++G + L DL +LN+LTHCN G +AT ++GTAL I H
Sbjct: 140 DEDAAQNEAIGKHGLKLLQDLAAKKEQGQRLNILTHCNAGWIATVDWGTALAPIYMAHDL 199
Query: 270 NKIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 200 GLNVHVWVDETRPRNQGA 217
>gi|428298642|ref|YP_007136948.1| methylthioribose-1-phosphate isomerase [Calothrix sp. PCC 6303]
gi|428235186|gb|AFZ00976.1| methylthioribose-1-phosphate isomerase [Calothrix sp. PCC 6303]
Length = 354
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ A +++ + V ++ L++ +++ +D+ +AIG +G
Sbjct: 90 LRSTRPTAVNLFWAIS--RATQVAYETLGTVEDIRKALLETAQALQLEDLQTCQAIGDHG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L + P KL +LTHCN G+LAT YGTALGV+RS ++ + ETRP QG
Sbjct: 148 LKVLPN-KP--EKLTLLTHCNAGALATGGYGTALGVVRSAWREGRLNRLFADETRPRLQG 204
Query: 287 AR 288
A+
Sbjct: 205 AK 206
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---- 62
+I+ +++ ++DQ LP+ V+I+ ED +AIK+M VRGAPAI I G+ +
Sbjct: 11 VIWHNNAVSLIDQTRLPNEYTFVEIHRSEDMARAIKTMIVRGAPAIGIAAAYGMYLGARE 70
Query: 63 ---DIKDKQFPDNE----------------------------------------LIQLIE 79
D +D+ E L++ +
Sbjct: 71 IETDKRDQFLQQLETVATMLRSTRPTAVNLFWAISRATQVAYETLGTVEDIRKALLETAQ 130
Query: 80 SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
++ +D+ +AIG +G + L + + KL +LTHCN G+LAT YGTALGV+RS
Sbjct: 131 ALQLEDLQTCQAIGDHGLKVLPN---KPEKLTLLTHCNAGALATGGYGTALGVVRS 183
>gi|374301193|ref|YP_005052832.1| Methylthioribose-1-phosphate isomerase [Desulfovibrio africanus
str. Walvis Bay]
gi|332554129|gb|EGJ51173.1| Methylthioribose-1-phosphate isomerase [Desulfovibrio africanus
str. Walvis Bay]
Length = 347
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E L+ + +ARPTAVN++ A + +++ L + ++ + + + + M +D + N+A
Sbjct: 80 ELLELIRTARPTAVNLRWAVERMEA-LWRANEVVELDHLASLWLDEAKRMQLEDEAINRA 138
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+GR+GA+ L D + V+THCN G+LATA +GTA+GVI + K + ETR
Sbjct: 139 MGRHGAELLSDGD------RVMTHCNAGALATAGFGTAVGVIYAAVEQGKRISVVANETR 192
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 193 PFLQGAR 199
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 52/170 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK---- 65
++ +L +LDQ LP + N +D A+++M VRGAPAI + G + +
Sbjct: 11 DQDALLLLDQRYLPLREEWFACRNTDDVIYALQTMVVRGAPAIGVTAAFGCYLASREVRG 70
Query: 66 --DKQFPDNELIQLIES----------------------------------------MLE 83
D + EL++LI + M
Sbjct: 71 KTDWRIALKELLELIRTARPTAVNLRWAVERMEALWRANEVVELDHLASLWLDEAKRMQL 130
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+D + N+A+GR+GA+ L D + V+THCN G+LATA +GTA+GVI
Sbjct: 131 EDEAINRAMGRHGAELLSDGD------RVMTHCNAGALATAGFGTAVGVI 174
>gi|374328755|ref|YP_005078939.1| translation initiation factor, aIF-2BI family [Pseudovibrio sp.
FO-BEG1]
gi|359341543|gb|AEV34917.1| translation initiation factor, aIF-2BI family [Pseudovibrio sp.
FO-BEG1]
Length = 368
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 28/170 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA +G AL + R P + SL+ + L + RPTA+N++ A
Sbjct: 60 ATAAFGVALEMARD---------------PSDASLDN----AWEVLHATRPTAINLRWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL----NPGV 237
+ ++S LS+ + R +++ + +D++ N +IG++G + + ++ NPG
Sbjct: 101 NDMRSRLSQLPLEQRADAAWQRAVEISD----EDVACNASIGKHGLKLIEEIAAQKNPG- 155
Query: 238 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCN G LAT ++GTA I H + ETRP NQGA
Sbjct: 156 DTINILTHCNAGWLATVDWGTATSPIYHAHNKGLKVHVWVDETRPRNQGA 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 47/186 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-------- 64
++ I+DQ LPH V++ +EDA +IK M VRGAP I G+ +++
Sbjct: 19 TVGIIDQTRLPHRFVEVELRTLEDAAVSIKDMWVRGAPLIGATAAFGVALEMARDPSDAS 78
Query: 65 ---------------------------KDKQFP-----DNELIQLIESMLEKDISDNKAI 92
+ Q P D + +E + ++D++ N +I
Sbjct: 79 LDNAWEVLHATRPTAINLRWALNDMRSRLSQLPLEQRADAAWQRAVE-ISDEDVACNASI 137
Query: 93 GRNGAQALIDL----NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
G++G + + ++ NP +N+LTHCN G LAT ++GTA I H V + D
Sbjct: 138 GKHGLKLIEEIAAQKNPG-DTINILTHCNAGWLATVDWGTATSPIYHAHNKGLKVHVWVD 196
Query: 148 KQFPDN 153
+ P N
Sbjct: 197 ETRPRN 202
>gi|254472119|ref|ZP_05085519.1| methylthioribose-1-phosphate isomerase [Pseudovibrio sp. JE062]
gi|211958402|gb|EEA93602.1| methylthioribose-1-phosphate isomerase [Pseudovibrio sp. JE062]
Length = 368
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 28/170 (16%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA +G AL + R P + SL+ + L + RPTA+N++ A
Sbjct: 60 ATAAFGVALEMARD---------------PSDASLDN----AWEVLHATRPTAINLRWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDL----NPGV 237
+ ++S LS+ + R +++ + +D++ N +IG++G + + ++ NPG
Sbjct: 101 NDMRSRLSQLPLEQRADAAWQRAVEISD----EDVACNASIGKHGLKLIEEIAAQKNPG- 155
Query: 238 SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCN G LAT ++GTA I H + ETRP NQGA
Sbjct: 156 DTINILTHCNAGWLATVDWGTATSPIYHAHNKGLKVHVWVDETRPRNQGA 205
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 47/186 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-------- 64
++ I+DQ LPH V++ +EDA +IK M VRGAP I G+ +++
Sbjct: 19 TVGIIDQTRLPHRFVEVELRTLEDAAVSIKDMWVRGAPLIGATAAFGVALEMARDPSDAS 78
Query: 65 ---------------------------KDKQFP-----DNELIQLIESMLEKDISDNKAI 92
+ Q P D + +E + ++D++ N +I
Sbjct: 79 LDNAWEVLHATRPTAINLRWALNDMRSRLSQLPLEQRADAAWQRAVE-ISDEDVACNASI 137
Query: 93 GRNGAQALIDL----NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
G++G + + ++ NP +N+LTHCN G LAT ++GTA I H V + D
Sbjct: 138 GKHGLKLIEEIAAQKNPG-DTINILTHCNAGWLATVDWGTATSPIYHAHNKGLKVHVWVD 196
Query: 148 KQFPDN 153
+ P N
Sbjct: 197 ETRPRN 202
>gi|421619230|ref|ZP_16060192.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri KOS6]
gi|409778781|gb|EKN58465.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri KOS6]
Length = 358
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E L ARPT VN+ A ++ L P ++ + + + ES D N
Sbjct: 87 EDFKLLADARPTGVNLFWALRQMRERLERLKLGEDPCTALEAQAVSIHES----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
A+ + G + LI + G + N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 143 AMAQFGVE-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 105/251 (41%), Gaps = 62/251 (24%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ L+SI ++ L +LDQ LP ++ AI+ M VRGAPAI I GL+
Sbjct: 9 ERLKSIEWQDGRLMLLDQRKLPAEEIWHSYDSAASVADAIRKMVVRGAPAIGISAAYGLL 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKL----------- 110
+ + + + Q +E K ++D + G N AL + R+ +L
Sbjct: 69 LAARARIAAGGDWQQALEEDF-KLLADARPTGVNLFWALRQMRERLERLKLGEDPCTALE 127
Query: 111 ---------------------------------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N+LTHCNTG+LAT +GTALGVIR+ H
Sbjct: 128 AQAVSIHESDREANLAMAQFGVELIRRHQGNPQNLLTHCNTGALATGGFGTALGVIRAAH 187
Query: 138 GANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPV 197
+ +V+ YV E +L +R TA + D V ++L+ ++
Sbjct: 188 -LDGLVE------------RVYVDETRPWLQGSRLTAWEL--LGDGVPATLN--VDSAAA 230
Query: 198 NTVKTRLIQLI 208
+ +K+R I +
Sbjct: 231 HLMKSRGISWV 241
>gi|39937878|ref|NP_950154.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris
CGA009]
gi|39651738|emb|CAE30260.1| translation initiation factor, aIF-2B alpha subunit
[Rhodopseudomonas palustris CGA009]
Length = 374
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
LV+ RPTA+N+K A D ++ +L A P + V + E + ++D++ N+AIG +G
Sbjct: 86 LVATRPTAINLKWALDEMRRAL---APVQPADRVAAAYRRAGE-IADEDVAINQAIGASG 141
Query: 227 AQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ LI+ PG ++NVLTHCN G LAT ++GTA I A Y ETR
Sbjct: 142 LK-LIEAIAATKKPG-ERVNVLTHCNAGWLATVDWGTATAPIYQAFDAGIPIHVYADETR 199
Query: 282 PYNQGA 287
P NQGA
Sbjct: 200 PRNQGA 205
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 44/176 (25%)
Query: 2 KSLQSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K ++I E + +DQ LPH +V + + +DA AI++M VRGAP I G
Sbjct: 6 KHTRTIWLEADGWTVGTIDQRRLPHDYVVVKLTSSDDAADAIRTMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKDK-----------------------QFPDNELIQLIE----------------S 80
+ + +++ ++ +E+ + +
Sbjct: 66 MALAMREDASDAGLDAAYAKLVATRPTAINLKWALDEMRRALAPVQPADRVAAAYRRAGE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ ++D++ N+AIG +G +A+ ++NVLTHCN G LAT ++GTA I
Sbjct: 126 IADEDVAINQAIGASGLKLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAPI 181
>gi|146282688|ref|YP_001172841.1| methylthioribose-1-phosphate isomerase [Pseudomonas stutzeri A1501]
gi|145570893|gb|ABP79999.1| probable initiation factor 2 subunit [Pseudomonas stutzeri A1501]
Length = 451
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E + L ++RPTAVN+ A + ++ L P ++ + I + ES D N
Sbjct: 180 EDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEAQAISIHES----DREANL 235
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
A+ + G LI + G + N+LTHCNTG+LAT +GTALGVIR+ H + Y ET
Sbjct: 236 AMAQFGVD-LIRRHQGNPQ-NLLTHCNTGALATGGFGTALGVIRAAHLDGLVERVYVDET 293
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 294 RPWLQGSR 301
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 59/187 (31%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ ++SI + L +LDQ LP ++ AI+ M VRGAPAI I LV
Sbjct: 102 EKVKSIEWHGDRLSLLDQRKLPTEEVWHSCDSAAAVADAIRDMVVRGAPAIGISAAYALV 161
Query: 62 VDIKDKQFPDNELIQLIE------------------------------------------ 79
+ + + + Q +E
Sbjct: 162 LAARTRMAAGGDWRQALEEDVALLAASRPTAVNLFWALNQMRERLERLKPGEDPCAALEA 221
Query: 80 ---SMLEKDISDNKAIGRNGAQALIDL------NPRVSKLNVLTHCNTGSLATAEYGTAL 130
S+ E D N A+ + G +DL NP+ N+LTHCNTG+LAT +GTAL
Sbjct: 222 QAISIHESDREANLAMAQFG----VDLIRRHQGNPQ----NLLTHCNTGALATGGFGTAL 273
Query: 131 GVIRSLH 137
GVIR+ H
Sbjct: 274 GVIRAAH 280
>gi|332712210|ref|ZP_08432138.1| methylthioribose-1-phosphate isomerase [Moorea producens 3L]
gi|332349016|gb|EGJ28628.1| methylthioribose-1-phosphate isomerase [Moorea producens 3L]
Length = 353
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A + + E V +K L++ + + +D+ ++IG G
Sbjct: 90 LRQTRPTAVNLFWAIMRMLKNAYE--TIGTVEEIKASLLETAQQIQLEDLQTCQSIGDRG 147
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ L P KL +LTHCN G+LATA YGTALGV+RS ++ Y ETRP QG
Sbjct: 148 LEVL-PTTP--DKLCLLTHCNAGALATAGYGTALGVVRSAWRDGRLARLYADETRPRLQG 204
Query: 287 AR 288
AR
Sbjct: 205 AR 206
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 50/176 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---D 63
+++E + ++DQ LP +V+I+ ED +AIK+M VRGAPAI + G+ + +
Sbjct: 11 VVWENDRVILIDQNRLPGKYSIVEISRCEDMVEAIKTMIVRGAPAIGVAAAYGIYLGARE 70
Query: 64 IKDKQ----FPDNELI---------------------------------QLIESMLE--- 83
IK K+ + E++ ++ S+LE
Sbjct: 71 IKTKERKAFLAELEIVAQQLRQTRPTAVNLFWAIMRMLKNAYETIGTVEEIKASLLETAQ 130
Query: 84 ----KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D+ ++IG G + L P KL +LTHCN G+LATA YGTALGV+RS
Sbjct: 131 QIQLEDLQTCQSIGDRGLEVL-PTTP--DKLCLLTHCNAGALATAGYGTALGVVRS 183
>gi|302877860|ref|YP_003846424.1| translation initiation factor, aIF-2BI family [Gallionella
capsiferriformans ES-2]
gi|302580649|gb|ADL54660.1| translation initiation factor, aIF-2BI family [Gallionella
capsiferriformans ES-2]
Length = 359
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES--MLEKDISDNKAI 222
D L ARPTAVN+ A + +++ L P+ + +E+ + E+D+ N+AI
Sbjct: 83 DMLAKARPTAVNLSWAVERMRALLL------PLQACERADAAWLEAGRIAEQDVKINQAI 136
Query: 223 GRNGAQAL--IDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
GR+G + + I L G +N+LTHCN G LAT ++GTAL + + A + ET
Sbjct: 137 GRHGREHIQVIHLEKG-DTVNILTHCNAGWLATVDWGTALAPVYTAFEAGIPLHVWVDET 195
Query: 281 RPYNQGA 287
RP NQGA
Sbjct: 196 RPRNQGA 202
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 42/164 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
+++I+DQ LPH V + ++ DA AI+SMQVRGAP I + G+ + +K
Sbjct: 18 AVEIIDQTRLPHEFVTVRLESMRDAEFAIRSMQVRGAPLIGVAAAYGVALSMKHHATDAA 77
Query: 67 ---------KQFPD----NELIQLIESML--------------------EKDISDNKAIG 93
K P + ++ + ++L E+D+ N+AIG
Sbjct: 78 LKATCDMLAKARPTAVNLSWAVERMRALLLPLQACERADAAWLEAGRIAEQDVKINQAIG 137
Query: 94 RNGAQAL--IDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
R+G + + I L + +N+LTHCN G LAT ++GTAL + +
Sbjct: 138 RHGREHIQVIHLE-KGDTVNILTHCNAGWLATVDWGTALAPVYT 180
>gi|316936298|ref|YP_004111280.1| translation initiation factor, aIF-2BI family [Rhodopseudomonas
palustris DX-1]
gi|315604012|gb|ADU46547.1| translation initiation factor, aIF-2BI family [Rhodopseudomonas
palustris DX-1]
Length = 374
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
LV+ RPTA+N+K A D ++ +L A P + V + E + ++D++ N+AIG +G
Sbjct: 86 LVATRPTAINLKWALDEMRRAL---APVPPADRVAAAYRRAGE-IADEDVAINQAIGASG 141
Query: 227 AQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ LI+ PG ++NVLTHCN G LAT ++GTA I A Y ETR
Sbjct: 142 LK-LIEAIAATKKPG-ERVNVLTHCNAGWLATVDWGTATAPIYQAFDAGIPIHVYADETR 199
Query: 282 PYNQGA 287
P NQGA
Sbjct: 200 PRNQGA 205
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 44/176 (25%)
Query: 2 KSLQSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K ++I E + +DQ LPH +V + +DA AI++M VRGAP I G
Sbjct: 6 KHTRTIWLEADGWTVGTIDQRRLPHDYVVVKLTGSDDAADAIRTMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKDK-----------------------QFPDNELIQLIE----------------S 80
+ + +++ ++ +E+ + +
Sbjct: 66 MALAMREDASDAGLDAAYRKLVATRPTAINLKWALDEMRRALAPVPPADRVAAAYRRAGE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ ++D++ N+AIG +G +A+ ++NVLTHCN G LAT ++GTA I
Sbjct: 126 IADEDVAINQAIGASGLKLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAPI 181
>gi|406912812|gb|EKD52346.1| hypothetical protein ACD_62C00048G0001 [uncultured bacterium]
Length = 373
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
+ YV + L RPTAVN++ A D +K L+ + P++ ++ L++ ++ +D
Sbjct: 108 FKHYVYQICHELFLTRPTAVNLQWALDRMKKILTN-HQDKPIDELRELLVREAVAIKNED 166
Query: 216 ISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA 275
+ N+ +G G + L D + VLTHCN G+LATA +GTA+GV+ S K
Sbjct: 167 VETNQKMGAVGQELLSDGD------TVLTHCNAGALATAGWGTAVGVVYSAIQVGKKIKL 220
Query: 276 YCTETRPYNQGAR 288
ETRP QGAR
Sbjct: 221 IADETRPVLQGAR 233
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 61/206 (29%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK I ++ S+ +LDQ LP+ V N +D +AIK+M +RGAPAI + +G+
Sbjct: 28 MKHFLIIEWQDDSVIMLDQRKLPNEEIYVTCNTWQDVAEAIKNMTIRGAPAIGVAAAMGV 87
Query: 61 VVDIKDK-----------------------------------QF---------------P 70
+ ++++ Q+ P
Sbjct: 88 ALGVQNQKSKAKSKKESLGDFKHYVYQICHELFLTRPTAVNLQWALDRMKKILTNHQDKP 147
Query: 71 DNELIQLI----ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEY 126
+EL +L+ ++ +D+ N+ +G G + L D + VLTHCN G+LATA +
Sbjct: 148 IDELRELLVREAVAIKNEDVETNQKMGAVGQELLSDGD------TVLTHCNAGALATAGW 201
Query: 127 GTALGVIRS-LHGANKIVDIKDKQFP 151
GTA+GV+ S + KI I D+ P
Sbjct: 202 GTAVGVVYSAIQVGKKIKLIADETRP 227
>gi|435852213|ref|YP_007313799.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanomethylovorans
hollandica DSM 15978]
gi|433662843|gb|AGB50269.1| S-methyl-5-thioribose-1-phosphate isomerase [Methanomethylovorans
hollandica DSM 15978]
Length = 379
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES- 210
D D+L K + + + RPTAVN+ D + ++++ + R++ L E+
Sbjct: 110 DMDALLKDMQIAAKTIKATRPTAVNLAWGVDRILHAIND-----TYDLKGIRIVALSEAK 164
Query: 211 -MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHG 268
M ++D++ N+ IG +GA+ L D + VLTHCN G +A ++GTALGVIRS +
Sbjct: 165 RMADEDVAKNRKIGEHGARLLEDGD------VVLTHCNAGRMACVDWGTALGVIRSAVED 218
Query: 269 ANKIGAAYCTETRPYNQGAR 288
+I C ETRP NQG R
Sbjct: 219 GKQIQVVAC-ETRPLNQGGR 237
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 52/172 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD------ 63
E +S+ + DQ LLP K+++ + +AI S++VRGAPA+ + G G+ +
Sbjct: 49 ESNSIVMTDQTLLPAEYKVIECTTLASLCEAIMSLRVRGAPALGVAGGYGMALAARLSSA 108
Query: 64 ------IKDKQFP-----------------------------DNELIQLI-----ESMLE 83
+KD Q D + I+++ + M +
Sbjct: 109 KDMDALLKDMQIAAKTIKATRPTAVNLAWGVDRILHAINDTYDLKGIRIVALSEAKRMAD 168
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D++ N+ IG +GA+ L D + VLTHCN G +A ++GTALGVIRS
Sbjct: 169 EDVAKNRKIGEHGARLLEDGD------VVLTHCNAGRMACVDWGTALGVIRS 214
>gi|397167418|ref|ZP_10490860.1| S-methyl-5-thioribose-1-phosphate isomerase [Enterobacter
radicincitans DSM 16656]
gi|396090776|gb|EJI88344.1| S-methyl-5-thioribose-1-phosphate isomerase [Enterobacter
radicincitans DSM 16656]
Length = 340
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ + L+ L +ARPTAVN+ D +K +L A+ S V+ + ++LI+ +K + D+
Sbjct: 75 LAQALETLRAARPTAVNLMNNLDRMKRAL---AQESFVSALSAEALRLIDE--DKQLCDS 129
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
A AL+ PG S+L LTHCNTG LATA GTALGVI H K+ + E
Sbjct: 130 IA---QAGSALV--TPG-SRL--LTHCNTGGLATAGVGTALGVIALAHQQGKVANVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 34/178 (19%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M +LQ S+ + L ILDQ LP + + + V + I +++VRGAP I + L
Sbjct: 1 MHALQTTSLRVADNHLFILDQQALPQEKRWLSADTVAELVGHIHALRVRGAPLIGLSASL 60
Query: 59 GLVVDIKDKQFPDNELIQLIESM----------------LEKDISDNKAIGRNGAQAL-- 100
L + + D +L Q +E++ +++ ++ + A+AL
Sbjct: 61 LLALLAEQGANRD-QLAQALETLRAARPTAVNLMNNLDRMKRALAQESFVSALSAEALRL 119
Query: 101 IDLNPRV--------SKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
ID + ++ S L +LTHCNTG LATA GTALGVI H K+ ++
Sbjct: 120 IDEDKQLCDSIAQAGSALVTPGSRLLTHCNTGGLATAGVGTALGVIALAHQQGKVANV 177
>gi|337283910|ref|YP_004623384.1| translation initiation factor IF-2B subunit beta [Pyrococcus
yayanosii CH1]
gi|334899844|gb|AEH24112.1| translation initiation factor IF-2B subunit beta [Pyrococcus
yayanosii CH1]
Length = 356
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + VK L+E + ++ +K +++ + + ++D+ N +G G
Sbjct: 95 LKNTRPTAVNLFWALNRVKE-LAEEHREDSLDEIKRLIVEEAQRIADEDVEANLRMGHYG 153
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + NVLTHCN GSLAT GT V+R +H + + ETRP QG
Sbjct: 154 AEVL-------PEGNVLTHCNAGSLATVHLGTVGAVLRVMHKEGTLKLLWVDETRPVLQG 206
Query: 287 AR 288
AR
Sbjct: 207 AR 208
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---- 60
+S+ Y+ ++ I+DQ LP K++ + VE+ +AIK+M+VRGAPAI GL
Sbjct: 14 RSVEYKAGTVYIIDQTKLPAEFKIIALRTVEEVAEAIKTMKVRGAPAIGATAAFGLALYA 73
Query: 61 --------------------------------------VVDIKDKQFPD--NELIQLI-- 78
V ++ ++ D +E+ +LI
Sbjct: 74 ETSKAKTKEDFFAGFYKAYETLKNTRPTAVNLFWALNRVKELAEEHREDSLDEIKRLIVE 133
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+ L + NVLTHCN GSLAT GT V+R +
Sbjct: 134 EAQRIADEDVEANLRMGHYGAEVL-------PEGNVLTHCNAGSLATVHLGTVGAVLRVM 186
Query: 137 H 137
H
Sbjct: 187 H 187
>gi|383823417|ref|ZP_09978611.1| initiation factor eIF-2B subunit alpha-like protein [Mycobacterium
xenopi RIVM700367]
gi|383338992|gb|EID17345.1| initiation factor eIF-2B subunit alpha-like protein [Mycobacterium
xenopi RIVM700367]
Length = 531
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 84/175 (48%), Gaps = 36/175 (20%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
S+ +E +L +DQ LPH + + I V++ AIK++ +RGAPAI + G G+ +
Sbjct: 5 SVKWEDGALVAIDQRALPHQLRWLRITTVDELIDAIKTLAIRGAPAIGVSGAFGVAL-AA 63
Query: 66 DKQFPDNELIQLIESMLE--KDISDNKAIG--------RNGAQALID------------- 102
D E ++L S + + + N A G GA+A++D
Sbjct: 64 FAHVGDPEKVELEASRIAAARPTAVNLAWGVQRALARLSQGARAVLDEAREMLAEGDRVN 123
Query: 103 ---------LNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
L RV +L +LTHC+TG LATA +GTALG + LH + I ++
Sbjct: 124 RAAATQAADLVQRVCPDRRLRILTHCDTGPLATAAFGTALGALEVLHTRHAIDEV 178
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
+ +ARPTAVN+ + LS+ A+A ++ ML + N+A
Sbjct: 80 IAAARPTAVNLAWGVQRALARLSQGARA---------VLDEAREMLAEGDRVNRAAATQA 130
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + + P +L +LTHC+TG LATA +GTALG + LH + I ETRP QG
Sbjct: 131 ADLVQRVCPD-RRLRILTHCDTGPLATAAFGTALGALEVLHTRHAIDEVLVDETRPLLQG 189
Query: 287 AR 288
AR
Sbjct: 190 AR 191
>gi|291288013|ref|YP_003504829.1| translation initiation factor, aIF-2BI family [Denitrovibrio
acetiphilus DSM 12809]
gi|290885173|gb|ADD68873.1| translation initiation factor, aIF-2BI family [Denitrovibrio
acetiphilus DSM 12809]
Length = 386
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
+KD Q D + EK DYL S+RPTAVN+ A +K + + + + +
Sbjct: 103 VKDMQNVPADKFLTVLKEKADYLNSSRPTAVNLSWA---LKRMVQKAESRKELTSTQLYK 159
Query: 205 IQLIESML--EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGV 262
+ + E++L E+D K+IG NGA LI GV LTHCN G+LAT+E GTA
Sbjct: 160 VLVDEAVLIHEEDKHLCKSIGLNGA-PLIKEGYGV-----LTHCNAGALATSELGTATAP 213
Query: 263 IRSLHGANKIGAAYCTETRPYNQGAR 288
+ + H A Y ETRP QGAR
Sbjct: 214 MYTAHAAGVNFKVYADETRPLLQGAR 239
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 56/184 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
++I + L +LDQ LP + + ++E + +IK ++VRGAPAI I G GL+ +
Sbjct: 44 KTIEFIDGELYLLDQTQLPVKTVIEKQISIEQVWDSIKVLKVRGAPAIGIAGAYGLLYGV 103
Query: 65 KDKQ-FPDNELI-----------------------------------QLIESMLEKDISD 88
KD Q P ++ + +L + L K + D
Sbjct: 104 KDMQNVPADKFLTVLKEKADYLNSSRPTAVNLSWALKRMVQKAESRKELTSTQLYKVLVD 163
Query: 89 N------------KAIGRNGAQALIDLNPRVSK-LNVLTHCNTGSLATAEYGTALGVIRS 135
K+IG NGA P + + VLTHCN G+LAT+E GTA + +
Sbjct: 164 EAVLIHEEDKHLCKSIGLNGA-------PLIKEGYGVLTHCNAGALATSELGTATAPMYT 216
Query: 136 LHGA 139
H A
Sbjct: 217 AHAA 220
>gi|375259598|ref|YP_005018768.1| translation initiation factor, aIF-2BI family protein [Klebsiella
oxytoca KCTC 1686]
gi|365909076|gb|AEX04529.1| translation initiation factor, aIF-2BI family protein [Klebsiella
oxytoca KCTC 1686]
Length = 342
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E L+ L +ARPTAVN+ D +K +L+E R Q +E+ + I ++K
Sbjct: 77 EALETLRAARPTAVNLMNNLDRMKLALAE-----------ERFPQALEAEALRLIEEDKQ 125
Query: 222 IGRNGAQALIDL-NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ + A+A L PG S+L LTHCNTG LATA GTALGVI H K+ + ET
Sbjct: 126 LCASIAEAGSALVTPG-SRL--LTHCNTGGLATAGVGTALGVIALAHQQGKVANVWVDET 182
Query: 281 RPYNQGAR 288
RP QG R
Sbjct: 183 RPLLQGGR 190
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 46/184 (25%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M++LQ S+ ++ L ILDQ LP + + +NV I +++VRGAP I + L
Sbjct: 1 MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASL 60
Query: 59 --------GLVVD-----------------------------IKDKQFPDNELIQLIESM 81
GL + + +++FP Q +E+
Sbjct: 61 LLALLAQRGLTREALSEALETLRAARPTAVNLMNNLDRMKLALAEERFP-----QALEAE 115
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+ I ++K + + A+A L S+L LTHCNTG LATA GTALGVI H K
Sbjct: 116 ALRLIEEDKQLCASIAEAGSALVTPGSRL--LTHCNTGGLATAGVGTALGVIALAHQQGK 173
Query: 142 IVDI 145
+ ++
Sbjct: 174 VANV 177
>gi|397656666|ref|YP_006497368.1| methylthioribose-1-phosphate isomerase [Klebsiella oxytoca E718]
gi|394345226|gb|AFN31347.1| Methylthioribose-1-phosphate isomerase [Klebsiella oxytoca E718]
Length = 342
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 15/128 (11%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
E L+ L +ARPTAVN+ D +K +L+E R Q +E+ + I ++K
Sbjct: 77 EALETLRAARPTAVNLMNNLDRMKLALAE-----------ERFPQALEAEALRLIEEDKQ 125
Query: 222 IGRNGAQALIDL-NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ + A+A L PG S+L LTHCNTG LATA GTALGVI H K+ + ET
Sbjct: 126 LCASIAEAGSALVTPG-SRL--LTHCNTGGLATAGVGTALGVIALAHQQGKVANVWVDET 182
Query: 281 RPYNQGAR 288
RP QG R
Sbjct: 183 RPLLQGGR 190
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 46/184 (25%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M++LQ S+ ++ L ILDQ LP + + +NV I +++VRGAP I + L
Sbjct: 1 MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASL 60
Query: 59 --------GLV-----------------------------VDIKDKQFPDNELIQLIESM 81
GL + + +++FP Q +E+
Sbjct: 61 LLALLAQRGLTREALSEALETLRAARPTAVNLMNNLDRMKLALAEERFP-----QALEAE 115
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+ I ++K + + A+A L S+L LTHCNTG LATA GTALGVI H K
Sbjct: 116 ALRLIEEDKQLCASIAEAGSALVTPGSRL--LTHCNTGGLATAGVGTALGVIALAHQQGK 173
Query: 142 IVDI 145
+ ++
Sbjct: 174 VANV 177
>gi|124485799|ref|YP_001030415.1| translation initiation factor 2B subunit I [Methanocorpusculum
labreanum Z]
gi|124363340|gb|ABN07148.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanocorpusculum labreanum Z]
Length = 338
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 49/179 (27%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD----IK 65
E S+ ++DQ LLP K+++I V AI+ ++VRGAPA+ + G G+ + +
Sbjct: 12 ENSSVMLIDQTLLPTEYKVIEITEVSRLADAIRRLEVRGAPALGVAGAFGVALSAARCVS 71
Query: 66 DKQFPDN----------------------------------ELIQLIESMLEKDISDNKA 91
D +F + E+ +++ K I++N
Sbjct: 72 DVEFDETIASDAALLKSTRPTAVNLAWGVDKVLRSMENLPPEMARVMALFAAKTIAENDT 131
Query: 92 -----IGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+G NGA L P++ VLTHCN G+LA + +GTALGVIRS K + +
Sbjct: 132 KACMLLGHNGASLL----PQIG--TVLTHCNAGALACSSWGTALGVIRSAKKMGKKISV 184
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ D V S+ P + + +++ E D +G NG
Sbjct: 86 LKSTRPTAVNLAWGVDKVLRSMEN----LPPEMARVMALFAAKTIAENDTKACMLLGHNG 141
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A L + VLTHCN G+LA + +GTALGVIRS K + ETRP QG
Sbjct: 142 ASLLPQIG------TVLTHCNAGALACSSWGTALGVIRSAKKMGKKISVVSCETRPLLQG 195
Query: 287 AR 288
+R
Sbjct: 196 SR 197
>gi|83589555|ref|YP_429564.1| translation initiation factor 2B subunit I [Moorella thermoacetica
ATCC 39073]
gi|123524874|sp|Q2RKL8.1|MTNA_MOOTA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|83572469|gb|ABC19021.1| methylthioribose-1-phosphate isomerase [Moorella thermoacetica ATCC
39073]
Length = 351
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 77/144 (53%), Gaps = 7/144 (4%)
Query: 145 IKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRL 204
+KD D E + + YL S+RPTAVN+ A V+ +++ A V +K +
Sbjct: 65 VKDSGARDKAGFEAELQKAAAYLASSRPTAVNLFWALKRVQQAVAA-AATDDVAALKELV 123
Query: 205 IQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIR 264
++ ++ ++D + +AIG +GA L D VLTHCN G+LATA YGTAL I
Sbjct: 124 LKEALAIRDEDEAMCRAIGEHGASLLADAE------AVLTHCNAGTLATARYGTALAPIY 177
Query: 265 SLHGANKIGAAYCTETRPYNQGAR 288
+L K+ + ETRP QGAR
Sbjct: 178 TLAARGKVLKVFADETRPLLQGAR 201
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 83/193 (43%), Gaps = 56/193 (29%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ + I + ++++DQ LLP ++ VE+ + AIK ++VRGAPAI I LGL
Sbjct: 3 EPIAPISWRDGQVEMIDQTLLPGELVIIRPRTVEEMWDAIKKLKVRGAPAIGIAAALGLY 62
Query: 62 VDIKDKQFPD-----------------------------------------------NEL 74
+ +KD D EL
Sbjct: 63 LAVKDSGARDKAGFEAELQKAAAYLASSRPTAVNLFWALKRVQQAVAAAATDDVAALKEL 122
Query: 75 IQLIESMLEKDISDN--KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGV 132
+ L E++ +D + +AIG +GA L D VLTHCN G+LATA YGTAL
Sbjct: 123 V-LKEALAIRDEDEAMCRAIGEHGASLLADAE------AVLTHCNAGTLATARYGTALAP 175
Query: 133 IRSLHGANKIVDI 145
I +L K++ +
Sbjct: 176 IYTLAARGKVLKV 188
>gi|392407134|ref|YP_006443742.1| methylthioribose-1-phosphate isomerase [Anaerobaculum mobile DSM
13181]
gi|390620270|gb|AFM21417.1| methylthioribose-1-phosphate isomerase [Anaerobaculum mobile DSM
13181]
Length = 365
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 15/135 (11%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS---PVNTVKTRLIQLIESMLEKDI 216
V E + L RPTAVN+ A + ++ + +++ A+ P +K L+++ + E++
Sbjct: 69 VKEAVSRLSKTRPTAVNLFWALEKMERAATDFHDATAKDPGLILKDHLLEVAVDIHEEER 128
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAA- 275
K I +G Q+++ N VLTHCN G+LAT GTALGVIR A KIG A
Sbjct: 129 RIEKLIALHG-QSIVPPN-----CQVLTHCNAGALATGGIGTALGVIRM---AQKIGKAI 179
Query: 276 --YCTETRPYNQGAR 288
YC ETRP QGAR
Sbjct: 180 KVYCDETRPLLQGAR 194
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 50/183 (27%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---- 62
I +E SL +LDQ +P + + N +D +AI+ M VRGAPAI I G+V+
Sbjct: 5 IKWEDGSLYLLDQRRIPFEVEYLKCTNYQDVAEAIEKMIVRGAPAIGIAAAYGIVLASHG 64
Query: 63 ----------------------------------DIKDKQFPD------NELIQLIESML 82
D D D + L+++ +
Sbjct: 65 GLPMVKEAVSRLSKTRPTAVNLFWALEKMERAATDFHDATAKDPGLILKDHLLEVAVDIH 124
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
E++ K I +G Q+++ N VLTHCN G+LAT GTALGVIR K
Sbjct: 125 EEERRIEKLIALHG-QSIVPPN-----CQVLTHCNAGALATGGIGTALGVIRMAQKIGKA 178
Query: 143 VDI 145
+ +
Sbjct: 179 IKV 181
>gi|452990715|emb|CCQ98070.1| Methylthioribose-1-phosphate isomerase [Clostridium ultunense Esp]
Length = 352
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L S RPTAVN+ + D+ LS++A++ + ++ +LE+ ++ K +GR G
Sbjct: 94 LKSTRPTAVNLSKTVDN----LSKFAESCSEDRFYEEFMEKACDVLEEQLNFEKELGRYG 149
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYG-TALGVIRSLHGANKIGAAYCTETRPYNQ 285
A+ + D + ++LTHC++G+LA + +G AL VIR+ K YC ETRPY Q
Sbjct: 150 AEIINDGD------SILTHCHSGALAGSGFGGRALSVIRTAFLEGKNIHVYCCETRPYLQ 203
Query: 286 GAR 288
GAR
Sbjct: 204 GAR 206
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 60/217 (27%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
L I E++ L ++DQ LPH +++++I V+ + IK M +RG+ AI I G G++
Sbjct: 17 LMPIWVEENHLCMIDQRKLPHKTEILEITQVDQLAKGIKDMAIRGSGAIGIAGVYGMLLA 76
Query: 62 ----------VDIKDKQFP-------------DN---------------ELIQLIESMLE 83
V + K+ DN E ++ +LE
Sbjct: 77 SRISGGKKEDVILAGKKLKSTRPTAVNLSKTVDNLSKFAESCSEDRFYEEFMEKACDVLE 136
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEY-GTALGVIRSLHGANKI 142
+ ++ K +GR GA+ + D + ++LTHC++G+LA + + G AL VIR+
Sbjct: 137 EQLNFEKELGRYGAEIINDGD------SILTHCHSGALAGSGFGGRALSVIRT------- 183
Query: 143 VDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
F + ++ Y E YL AR TA +++
Sbjct: 184 ------AFLEGKNIHVYCCETRPYLQGARITAYELEK 214
>gi|374604329|ref|ZP_09677293.1| methylthioribose-1-phosphate isomerase [Paenibacillus
dendritiformis C454]
gi|374390066|gb|EHQ61424.1| methylthioribose-1-phosphate isomerase [Paenibacillus
dendritiformis C454]
Length = 359
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
DYL S+RPTAVN+ A D +++ S + +K L Q E++ +D + IGR
Sbjct: 93 DYLASSRPTAVNLFWALDRMEARFQRELSGS-IAEIKEALRQEAEAIRAEDEQVCEQIGR 151
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ AL L PG +LTHCN G++ATA+YGTAL I Y ETRP
Sbjct: 152 H---ALSLLKPG---WGILTHCNAGAIATAKYGTALAPIYLGEEQGYGFKVYADETRPLL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 48/166 (28%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI-------K 65
+L ILDQ +LP+ + + ++D + AI ++VRGAPAI I GL + + K
Sbjct: 22 TLVILDQTMLPNEKVFLKLKELKDIWDAIYHLKVRGAPAIGIAAGYGLYLGVKASAAQTK 81
Query: 66 DKQFPDNELIQ------------------LIESMLEKDIS-------------------- 87
++ D E ++ +E+ ++++S
Sbjct: 82 EELAEDFERVKDYLASSRPTAVNLFWALDRMEARFQRELSGSIAEIKEALRQEAEAIRAE 141
Query: 88 DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
D + + G AL L P +LTHCN G++ATA+YGTAL I
Sbjct: 142 DEQVCEQIGRHALSLLKP---GWGILTHCNAGAIATAKYGTALAPI 184
>gi|292670396|ref|ZP_06603822.1| S-methyl-5-thioribose-1-phosphate isomerase [Selenomonas noxia ATCC
43541]
gi|292647988|gb|EFF65960.1| S-methyl-5-thioribose-1-phosphate isomerase [Selenomonas noxia ATCC
43541]
Length = 347
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 7/124 (5%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
DYL S+RPTAVN+ A + ++ + E AK V ++T L + ++DI K IG
Sbjct: 90 DYLNSSRPTAVNLSWALNRMEKIVQE-AKGKSVPEIRTLLRDEALRIKQEDIDICKKIGE 148
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
+ AL + PG + +LTHCN G LATA+YGTA V+ H + ETRP
Sbjct: 149 H---ALTLVKPG---MGLLTHCNAGQLATAKYGTATAVMYLGHQKGYNFKIFADETRPLL 202
Query: 285 QGAR 288
QGAR
Sbjct: 203 QGAR 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 42/170 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG-----LVVDI 64
E+H+L I+DQ LP+ ++ + + + + AI+ +QVRGAPAI +G L +D
Sbjct: 16 EEHALVIIDQTKLPNKAEYLRLKTQGEIWTAIRELQVRGAPAIGDAAAIGIYLAALEIDT 75
Query: 65 KD-----KQFPD-------------------NELIQLIESMLEKDISDNKAIGRNGA--- 97
D +QF N + ++++ K + + + + R+ A
Sbjct: 76 DDYGEFARQFHKAADYLNSSRPTAVNLSWALNRMEKIVQEAKGKSVPEIRTLLRDEALRI 135
Query: 98 -QALIDLNPRVSK---------LNVLTHCNTGSLATAEYGTALGVIRSLH 137
Q ID+ ++ + + +LTHCN G LATA+YGTA V+ H
Sbjct: 136 KQEDIDICKKIGEHALTLVKPGMGLLTHCNAGQLATAKYGTATAVMYLGH 185
>gi|89902509|ref|YP_524980.1| putative translation initiation factor,
aIF-2BI/5-methylthioribose-1-phosphate isomerase
[Rhodoferax ferrireducens T118]
gi|122478277|sp|Q21S04.1|MTNA_RHOFD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|89347246|gb|ABD71449.1| translation initiation factor 2B subunit I family (IF-2BI)
[Rhodoferax ferrireducens T118]
Length = 354
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG AL ++ L GA + ++ + D L ++RPTAVN+ A
Sbjct: 63 AAYGVALESVQ-LRGATR------------EAFAVGLQRGFDVLAASRPTAVNLFWALAR 109
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+++ + + V L Q E + D+ N+A+G GA L D VL
Sbjct: 110 MRAVWDANQHRAVGDIVDCLLAQAHE-ISADDVRINRAMGAYGAALLAD------GARVL 162
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA +GTALGVIRS A K + ETRP+ QGAR
Sbjct: 163 THCNAGALATAGHGTALGVIRSAVQAGKRISVIADETRPFLQGAR 207
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 85/198 (42%), Gaps = 55/198 (27%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
++Q++ + + L+++DQ +LP + + + + + I+SM VRGAPAI G+ +
Sbjct: 10 AVQTLRWREGRLEMIDQRVLPARFEYLPFTSAAEVAEGIRSMVVRGAPAIGCAAAYGVAL 69
Query: 63 ---------------------DIKDKQFPD--------------------NELIQLIESM 81
D+ P + +++ +
Sbjct: 70 ESVQLRGATREAFAVGLQRGFDVLAASRPTAVNLFWALARMRAVWDANQHRAVGDIVDCL 129
Query: 82 LEK-------DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
L + D+ N+A+G GA L D VLTHCN G+LATA +GTALGVIR
Sbjct: 130 LAQAHEISADDVRINRAMGAYGAALLAD------GARVLTHCNAGALATAGHGTALGVIR 183
Query: 135 S-LHGANKIVDIKDKQFP 151
S + +I I D+ P
Sbjct: 184 SAVQAGKRISVIADETRP 201
>gi|240137237|ref|YP_002961706.1| translation initiation factor, aIF-2B alpha subunit (eIF-2B)
[Methylobacterium extorquens AM1]
gi|418060127|ref|ZP_12698052.1| translation initiation factor, aIF-2BI family [Methylobacterium
extorquens DSM 13060]
gi|240007203|gb|ACS38429.1| putative translation initiation factor, aIF-2B alpha subunit
(eIF-2B) [Methylobacterium extorquens AM1]
gi|373566311|gb|EHP92315.1| translation initiation factor, aIF-2BI family [Methylobacterium
extorquens DSM 13060]
Length = 365
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
D+ E + L + RPTA+N++ A D + + L + +P + + S+
Sbjct: 72 QDASEAGIERASATLAATRPTAINLRWALDRMAAVL----RRAPQSAREALAFTEAASIA 127
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D++ +AIG +GA+ L ++ +NVLTHCN G LAT ++GTAL I H A
Sbjct: 128 DEDVASCRAIGEHGAKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGV 187
Query: 272 IGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 188 PIHVFVDETRPRNQGA 203
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 41/182 (22%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
++ ++DQ LP +L + +++DA AI++M VRGAP I + G+ + ++
Sbjct: 19 AVMVIDQTRLPFAFELKRLASLDDAAVAIRTMVVRGAPLIGVTAAYGMALAMRQDASEAG 78
Query: 67 -----------------------------KQFPDN--ELIQLIE--SMLEKDISDNKAIG 93
++ P + E + E S+ ++D++ +AIG
Sbjct: 79 IERASATLAATRPTAINLRWALDRMAAVLRRAPQSAREALAFTEAASIADEDVASCRAIG 138
Query: 94 RNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFP 151
+GA+ L ++ + +NVLTHCN G LAT ++GTAL I H A + + D+ P
Sbjct: 139 EHGAKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPIHVFVDETRP 198
Query: 152 DN 153
N
Sbjct: 199 RN 200
>gi|270307883|ref|YP_003329941.1| methylthioribose-1-phosphate isomerase [Dehalococcoides sp. VS]
gi|270153775|gb|ACZ61613.1| methylthioribose-1-phosphate isomerase [Dehalococcoides sp. VS]
Length = 332
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
+ S RPTA N+ AA+ + + A + V+ VK L++ + ++ ++ I G
Sbjct: 83 IASTRPTAKNLFMAAERMDHVV---ASGTDVSQVKISLVEEAVKIHHEEEEASRKISAFG 139
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ + PG VLTHCN G LATA YGTALGVI + H K +A+ TETRP QG
Sbjct: 140 AELI---QPG---WTVLTHCNAGPLATAGYGTALGVILAAHQQGKNISAFATETRPLLQG 193
Query: 287 AR 288
+R
Sbjct: 194 SR 195
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAI-------VG 56
+++I + + L ILDQ LLP K +++N+ +AIK+++VRGAP+I + +G
Sbjct: 1 MKAIEWRDNRLIILDQTLLPLEEKYLELNDYHAVAEAIKTLRVRGAPSIGVAAAYGIALG 60
Query: 57 CLGLVVDIKDKQFPDNELIQLIES-------------MLEKDISDNKAIGRNGAQALIDL 103
LG+ + P L Q + + M + + A G + +Q I L
Sbjct: 61 ALGIETQYCSEFLP---LYQQVSAEIASTRPTAKNLFMAAERMDHVVASGTDVSQVKISL 117
Query: 104 NPRVSKLN-----------------------VLTHCNTGSLATAEYGTALGVIRSLHGAN 140
K++ VLTHCN G LATA YGTALGVI + H
Sbjct: 118 VEEAVKIHHEEEEASRKISAFGAELIQPGWTVLTHCNAGPLATAGYGTALGVILAAHQQG 177
Query: 141 KIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
K ++ + E L +R TA+ +K A K
Sbjct: 178 K-------------NISAFATETRPLLQGSRLTALELKEAGVPFK 209
>gi|311280491|ref|YP_003942722.1| translation initiation factor, aIF-2BI family [Enterobacter cloacae
SCF1]
gi|308749686|gb|ADO49438.1| translation initiation factor, aIF-2BI family [Enterobacter cloacae
SCF1]
Length = 341
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 70/125 (56%), Gaps = 13/125 (10%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L ++RPTAVN+ D +K +L E + + T RL+ E+D + I
Sbjct: 79 LETLRASRPTAVNLMNNLDRMKLALREEGFVAALVTEALRLV-------EEDKALCDGIA 131
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
R G+ AL+ PG S+L LTHCNTG LATA GTALGVI+ H K+ + ETRP
Sbjct: 132 RAGS-ALV--KPG-SRL--LTHCNTGGLATAGVGTALGVIQQAHRQGKVANVWVDETRPL 185
Query: 284 NQGAR 288
QG R
Sbjct: 186 LQGGR 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 46/184 (25%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M +LQ S+ ++L ILDQ LP + +D + VE I +++VRGAP I + L
Sbjct: 1 MHTLQTTSLRIRDNALFILDQQALPQEKRWLDASTVEALVGHIHALRVRGAPLIGLSASL 60
Query: 59 GLVVDIKDKQFPDNELIQLIESM------------------------------------- 81
L + + D L+ +E++
Sbjct: 61 LLALLAEQGHSRD-ALLHALETLRASRPTAVNLMNNLDRMKLALREEGFVAALVTEALRL 119
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+E+D + I R G+ AL+ R+ LTHCNTG LATA GTALGVI+ H K
Sbjct: 120 VEEDKALCDGIARAGS-ALVKPGSRL-----LTHCNTGGLATAGVGTALGVIQQAHRQGK 173
Query: 142 IVDI 145
+ ++
Sbjct: 174 VANV 177
>gi|20808019|ref|NP_623190.1| translation initiation factor eIF-2B subunit alpha
[Thermoanaerobacter tengcongensis MB4]
gi|81481388|sp|Q8R9L7.1|MTNA_THETN RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|20516596|gb|AAM24794.1| Translation initiation factor eIF-2B alpha subunit
[Thermoanaerobacter tengcongensis MB4]
Length = 345
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIG 223
L+ L +RPTAVN+ A ++ L E K V+ + L + + +D+ NK +
Sbjct: 83 LNVLSKSRPTAVNLTWAIGRMRGVL-EKVKDLSVSDIYEALKEEANKIYFEDLETNKKMA 141
Query: 224 RNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ G + + P +LTHCNTG+LAT YGTALGVIR H + K Y ETRP
Sbjct: 142 KIGNEVI---KPNAV---ILTHCNTGALATVGYGTALGVIREAHYSGKNIFVYADETRPR 195
Query: 284 NQGAR 288
QGA+
Sbjct: 196 LQGAK 200
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 46/185 (24%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
MK ++++ + L ++DQ LP + + + +D AIK M VRGAPAI G+
Sbjct: 1 MKEIKTMEFRDGVLYLIDQRKLPLSYEFFECRTYQDVDFAIKDMVVRGAPAIGAAAAYGV 60
Query: 61 VVDIKDKQFPDNELIQLIESM------LEKD----ISDNKAIGR--------------NG 96
V + +QF E +++M L K ++ AIGR +
Sbjct: 61 V--LAAQQFMKEEKENFLKNMENALNVLSKSRPTAVNLTWAIGRMRGVLEKVKDLSVSDI 118
Query: 97 AQAL-----------IDLNPRVSKLN---------VLTHCNTGSLATAEYGTALGVIRSL 136
+AL ++ N +++K+ +LTHCNTG+LAT YGTALGVIR
Sbjct: 119 YEALKEEANKIYFEDLETNKKMAKIGNEVIKPNAVILTHCNTGALATVGYGTALGVIREA 178
Query: 137 HGANK 141
H + K
Sbjct: 179 HYSGK 183
>gi|218561463|ref|YP_002394376.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli S88]
gi|218707951|ref|YP_002415470.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli UMN026]
gi|293402947|ref|ZP_06647044.1| mtnA [Escherichia coli FVEC1412]
gi|298378474|ref|ZP_06988358.1| methylthioribose-1-phosphate isomerase [Escherichia coli FVEC1302]
gi|300900352|ref|ZP_07118529.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
198-1]
gi|301027264|ref|ZP_07190621.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
196-1]
gi|301646532|ref|ZP_07246405.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
146-1]
gi|331650761|ref|ZP_08351789.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli M718]
gi|417142778|ref|ZP_11985159.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli
97.0259]
gi|419929657|ref|ZP_14447325.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli 541-1]
gi|419935533|ref|ZP_14452613.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli 576-1]
gi|422750721|ref|ZP_16804631.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli H252]
gi|422776521|ref|ZP_16830175.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli H120]
gi|423700724|ref|ZP_17675183.1| methylthioribose-1-phosphate isomerase [Escherichia coli H730]
gi|432351507|ref|ZP_19594823.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE2]
gi|432356194|ref|ZP_19599443.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE4]
gi|432365680|ref|ZP_19608822.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE5]
gi|432399952|ref|ZP_19642714.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE26]
gi|432428980|ref|ZP_19671452.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE181]
gi|432463725|ref|ZP_19705849.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE204]
gi|432468812|ref|ZP_19710876.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE205]
gi|432478677|ref|ZP_19720657.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE208]
gi|432520545|ref|ZP_19757717.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE228]
gi|432540695|ref|ZP_19777579.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE235]
gi|432561806|ref|ZP_19798441.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE51]
gi|432634319|ref|ZP_19870230.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE80]
gi|432635205|ref|ZP_19871097.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE81]
gi|432643910|ref|ZP_19879726.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE83]
gi|432664030|ref|ZP_19899635.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE116]
gi|432878991|ref|ZP_20096161.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE154]
gi|432883372|ref|ZP_20098777.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE158]
gi|432909397|ref|ZP_20116729.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE190]
gi|432951981|ref|ZP_20145301.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE197]
gi|433010631|ref|ZP_20199036.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE229]
gi|433021569|ref|ZP_20209632.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE105]
gi|433050789|ref|ZP_20238091.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE120]
gi|433055932|ref|ZP_20243067.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE122]
gi|433070726|ref|ZP_20257470.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE128]
gi|433075738|ref|ZP_20262350.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE129]
gi|433123050|ref|ZP_20308685.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE157]
gi|433137608|ref|ZP_20322918.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE166]
gi|433161514|ref|ZP_20346313.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE177]
gi|433166428|ref|ZP_20351133.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE179]
gi|433181188|ref|ZP_20365544.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE82]
gi|433186242|ref|ZP_20370450.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE85]
gi|433324878|ref|ZP_20402108.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli J96]
gi|442592642|ref|ZP_21010612.1| Methylthioribose-1-phosphate isomerase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|254813647|sp|B7MMH6.1|MTNA_ECO45 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|254813648|sp|B7NGT8.1|MTNA_ECOLU RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218368232|emb|CAR06048.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli S88]
gi|218435048|emb|CAR16001.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli UMN026]
gi|291429862|gb|EFF02876.1| mtnA [Escherichia coli FVEC1412]
gi|298280808|gb|EFI22309.1| methylthioribose-1-phosphate isomerase [Escherichia coli FVEC1302]
gi|299879355|gb|EFI87566.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
196-1]
gi|300356151|gb|EFJ72021.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
198-1]
gi|301075237|gb|EFK90043.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli MS
146-1]
gi|323945915|gb|EGB41958.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli H120]
gi|323950621|gb|EGB46499.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli H252]
gi|331051215|gb|EGI23264.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli M718]
gi|385713838|gb|EIG50765.1| methylthioribose-1-phosphate isomerase [Escherichia coli H730]
gi|386154803|gb|EIH11161.1| S-methyl-5-thioribose-1-phosphate isomerase [Escherichia coli
97.0259]
gi|388402883|gb|EIL63438.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli 541-1]
gi|388404342|gb|EIL64806.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli 576-1]
gi|430880212|gb|ELC03527.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE4]
gi|430881598|gb|ELC04812.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE5]
gi|430881854|gb|ELC05067.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE2]
gi|430930651|gb|ELC51147.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE26]
gi|430949418|gb|ELC68860.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE181]
gi|430984113|gb|ELD00760.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE204]
gi|430988414|gb|ELD04907.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE205]
gi|431000612|gb|ELD16672.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE208]
gi|431046301|gb|ELD56415.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE228]
gi|431065734|gb|ELD74493.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE235]
gi|431101312|gb|ELE06230.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE51]
gi|431165824|gb|ELE66154.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE80]
gi|431175297|gb|ELE75317.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE81]
gi|431176392|gb|ELE76357.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE83]
gi|431205772|gb|ELF04213.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE116]
gi|431415746|gb|ELG98242.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE154]
gi|431421152|gb|ELH03367.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE158]
gi|431449151|gb|ELH29726.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE190]
gi|431474568|gb|ELH54384.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE197]
gi|431518843|gb|ELH96295.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE229]
gi|431525222|gb|ELI02020.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE105]
gi|431559960|gb|ELI33490.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE120]
gi|431563364|gb|ELI36578.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE122]
gi|431576973|gb|ELI49631.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE128]
gi|431578939|gb|ELI51524.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE129]
gi|431636483|gb|ELJ04613.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE157]
gi|431651779|gb|ELJ19015.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE166]
gi|431670752|gb|ELJ37049.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE177]
gi|431680954|gb|ELJ46761.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE179]
gi|431696367|gb|ELJ61551.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE82]
gi|431698656|gb|ELJ63681.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE85]
gi|432346642|gb|ELL41122.1| methyl-thioribose-1-phosphate isomerase [Escherichia coli J96]
gi|441607579|emb|CCP96053.1| Methylthioribose-1-phosphate isomerase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
Length = 371
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
L++Y D L+ RPTA+N+K A D + +L K V+ K L + E+D
Sbjct: 79 LQRY----YDLLIKTRPTAINLKWALDRMIDTL----KDLCVSERKDVAWALAAEIAEED 130
Query: 216 ISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
++ + IG +GA+ + ++ P S +N+LTHCN G LAT ++GTAL I H
Sbjct: 131 VALCEQIGLHGAEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSPIYKAHENGIP 190
Query: 273 GAAYCTETRPYNQGA 287
+ ETRP NQG
Sbjct: 191 VHVWVDETRPRNQGG 205
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------DIK 65
+++I+DQ LP ++V + + E A AI+ M VRGAP I +V G+ + D+
Sbjct: 19 AVEIIDQTKLPFKFEVVALTSAEMAATAIQDMWVRGAPLIGVVAAYGIALGMNHDASDMG 78
Query: 66 DKQFPD----------------NELIQLIESML----------------EKDISDNKAIG 93
+++ D + +I ++ + E+D++ + IG
Sbjct: 79 LQRYYDLLIKTRPTAINLKWALDRMIDTLKDLCVSERKDVAWALAAEIAEEDVALCEQIG 138
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+GA+ + ++ P S +N+LTHCN G LAT ++GTAL I H
Sbjct: 139 LHGAEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSPIYKAH 185
>gi|163793604|ref|ZP_02187579.1| methylthioribose-1-phosphate isomerase [alpha proteobacterium
BAL199]
gi|159181406|gb|EDP65921.1| methylthioribose-1-phosphate isomerase [alpha proteobacterium
BAL199]
Length = 367
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 71/138 (51%), Gaps = 9/138 (6%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + + L+ RPTAVN++ A D+ ++ L+ A + T + + +
Sbjct: 73 DASDAGLANAYETLMQTRPTAVNLRWALDAGRARLAAVAPGERIATAQA----FARRICD 128
Query: 214 KDISDNKAIGRNGAQALIDL----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
+D N AIGR+G + + + PG +NVLTHCN G LAT ++GTA I H A
Sbjct: 129 EDAELNHAIGRHGLEIIRGIAAKKRPG-ETVNVLTHCNAGWLATVDWGTATSPIYQAHDA 187
Query: 270 NKIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 188 GIPIHVWVDETRPRNQGA 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 45/185 (24%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
+++I+DQ LPH + ++ DA AIK+M VRGAP I GL + ++ D
Sbjct: 19 AVEIIDQTRLPHDFVTARLESMADAAHAIKAMLVRGAPLIGATAAWGLWLAMR-ADASDA 77
Query: 73 ELIQLIESMLE----------------------------------------KDISDNKAI 92
L E++++ +D N AI
Sbjct: 78 GLANAYETLMQTRPTAVNLRWALDAGRARLAAVAPGERIATAQAFARRICDEDAELNHAI 137
Query: 93 GRNGAQALIDLNPRV---SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DK 148
GR+G + + + + +NVLTHCN G LAT ++GTA I H A + + D+
Sbjct: 138 GRHGLEIIRGIAAKKRPGETVNVLTHCNAGWLATVDWGTATSPIYQAHDAGIPIHVWVDE 197
Query: 149 QFPDN 153
P N
Sbjct: 198 TRPRN 202
>gi|14521540|ref|NP_127016.1| translation initiation factor IF-2B subunit beta [Pyrococcus abyssi
GE5]
gi|11132497|sp|Q9UZ16.1|MTNA_PYRAB RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|5458759|emb|CAB50246.1| aIF-2BI translation initiation factor aIF-2BI [Pyrococcus abyssi
GE5]
gi|380742149|tpe|CCE70783.1| TPA: translation initiation factor IF-2B subunit beta [Pyrococcus
abyssi GE5]
Length = 356
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + +K + E + P++ +K+ ++ + + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIKKLVEEHLE-DPLDEIKSLIVNEAQKIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + N+LTHCN GSLAT GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNLLTHCNAGSLATVHLGTVGAVVRVMHKDGSLKLLWLDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 41/174 (23%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIV--------- 55
+S+ Y++ ++ +++Q LLP K+ VE +AIK+M VRGAPAI
Sbjct: 15 RSVEYKERTVYMINQRLLPREFKVEAFRTVESVAEAIKNMTVRGAPAIGAAAAFGLALYA 74
Query: 56 -------------GCLGLVVDIKDKQ-------FPDNELIQLIESMLEKDISDNKAIGRN 95
G +K+ + + N + +L+E LE + + K++ N
Sbjct: 75 ETSKAKSKDEFMDGFYKAYETLKNTRPTAVNLFWALNRIKKLVEEHLEDPLDEIKSLIVN 134
Query: 96 GAQAL----IDLNPRVSKL--------NVLTHCNTGSLATAEYGTALGVIRSLH 137
AQ + ++ N R+ N+LTHCN GSLAT GT V+R +H
Sbjct: 135 EAQKIADEDVEANLRMGHYGAEVLPEGNLLTHCNAGSLATVHLGTVGAVVRVMH 188
>gi|302529203|ref|ZP_07281545.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sp. AA4]
gi|302438098|gb|EFL09914.1| S-methyl-5-thioribose-1-phosphate isomerase [Streptomyces sp. AA4]
Length = 323
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
V + D + ARPTAVN+ + L A A ++ ++ML++D N
Sbjct: 68 VPAEADRIAHARPTAVNLAWGVSRALAQLPHGADA---------VLAEAKAMLDEDEQRN 118
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
+A + A+ ++D P L +L+HCNTG LAT +GTALGV+ LH + + E
Sbjct: 119 RAASAHAAEVVLDACPR-RPLRLLSHCNTGHLATVAWGTALGVVWHLHARGLVESVLVDE 177
Query: 280 TRPYNQGAR 288
TRP QG+R
Sbjct: 178 TRPLLQGSR 186
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 79 ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++ML++D N+A + A+ ++D PR L +L+HCNTG LAT +GTALGV+ LH
Sbjct: 108 KAMLDEDEQRNRAASAHAAEVVLDACPR-RPLRLLSHCNTGHLATVAWGTALGVVWHLH 165
>gi|402313214|ref|ZP_10832133.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae
bacterium ICM7]
gi|400366827|gb|EJP19850.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae
bacterium ICM7]
Length = 363
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 11/165 (6%)
Query: 129 ALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
A+GV + A I+ + D EK E +Y S+RPTAVN+ A + ++ +L
Sbjct: 58 AIGVCAAYGIAKTASQIEADNYAD---FEKGFLELKEYFASSRPTAVNLFWALNRMEDAL 114
Query: 189 SEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNT 248
K ++ +K L + E + +D+ ++ IG G + L L ++ ++THCN
Sbjct: 115 KA-NKEKSIDEIKEALFKEAEDIRNEDVEISRGIGALGFKLLKKLKRNGKEIGIMTHCNA 173
Query: 249 GSLATAEYGTA-----LGVIRSLHGANKIGAAYCTETRPYNQGAR 288
G+LATA+YGTA + + +G + YC ETRP QGAR
Sbjct: 174 GTLATAKYGTATAPMYMALENGFNGDDM--HVYCDETRPLLQGAR 216
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 92/229 (40%), Gaps = 64/229 (27%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL---VVDIKD 66
E L I+DQ LLP K +++N E+ ++AIK ++VRGAPAI + G+ I+
Sbjct: 17 EDKELNIIDQTLLPGEIKRINLNTKEEIWEAIKKLRVRGAPAIGVCAAYGIAKTASQIEA 76
Query: 67 KQFPDNE---------------------------------------------LIQLIESM 81
+ D E L + E +
Sbjct: 77 DNYADFEKGFLELKEYFASSRPTAVNLFWALNRMEDALKANKEKSIDEIKEALFKEAEDI 136
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL--HGA 139
+D+ ++ IG G + L L ++ ++THCN G+LATA+YGTA + +G
Sbjct: 137 RNEDVEISRGIGALGFKLLKKLKRNGKEIGIMTHCNAGTLATAKYGTATAPMYMALENGF 196
Query: 140 NKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSL 188
N D + Y E L AR TA + A +K++L
Sbjct: 197 N------------GDDMHVYCDETRPLLQGARLTAFELSNAG--IKTTL 231
>gi|289432407|ref|YP_003462280.1| translation initiation factor, aIF-2BI family [Dehalococcoides sp.
GT]
gi|288946127|gb|ADC73824.1| translation initiation factor, aIF-2BI family [Dehalococcoides sp.
GT]
Length = 332
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 82/165 (49%), Gaps = 22/165 (13%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG ALG + I+ + + SL + + ++ S RPTA N+ A +
Sbjct: 53 AAYGIALGAL----------SIETRYCSEFLSLYQQISAEI---ASTRPTAKNLFMAVER 99
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + A + V+ VK L+ + ++ ++ I GA + PG VL
Sbjct: 100 MDHVV---ASGTDVSQVKISLVDEALKIHREEEEASRKISTFGADLI---QPG---WTVL 150
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G LATA YGTALGVI + H NK +A+ TETRP QGAR
Sbjct: 151 THCNAGPLATAGYGTALGVIIAAHQQNKGISAFATETRPLLQGAR 195
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 53/222 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+++I + + L ILDQ LLP K +++N+ +AIK+++VRGAP+I + G+ +
Sbjct: 1 MKAIEWRNNRLIILDQTLLPLEEKYLELNDYHAVAEAIKTLRVRGAPSIGVAAAYGIALG 60
Query: 63 ---------------------DIKDKQFPDNELIQLIESMLE-----KDISDNK------ 90
+I + L +E M D+S K
Sbjct: 61 ALSIETRYCSEFLSLYQQISAEIASTRPTAKNLFMAVERMDHVVASGTDVSQVKISLVDE 120
Query: 91 --AIGRNGAQALIDLNPRVSKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
I R +A ++ + L VLTHCN G LATA YGTALGVI + H NK
Sbjct: 121 ALKIHREEEEASRKISTFGADLIQPGWTVLTHCNAGPLATAGYGTALGVIIAAHQQNK-- 178
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+ + E L AR TA+ +K A S K
Sbjct: 179 -----------GISAFATETRPLLQGARLTALELKEAGVSFK 209
>gi|317967986|ref|ZP_07969376.1| methylthioribose-1-phosphate isomerase [Synechococcus sp. CB0205]
Length = 362
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 8/137 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D + + D L + RPTAVN++ A + V+ + A P + ++ ++ +
Sbjct: 73 DPSDASLAAAFDQLNATRPTAVNLRWALERVRDRV---APLPPAERAEAAQVE-AGAIAD 128
Query: 214 KDISDNKAIGRNG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+D++ +AIG +G Q L PG LNVLTHCN G LAT ++GTAL I H A
Sbjct: 129 EDVAMCEAIGEHGLALFQELAAARPG-QTLNVLTHCNAGWLATVDWGTALAPIYKAHRAG 187
Query: 271 KIGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 188 LDIHVWVDETRPRNQGA 204
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 48/205 (23%)
Query: 2 KSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
++ ++I E S+ ++DQ+ LPH + + ++A +AI++M VRGAP I + G G
Sbjct: 6 QAWRTIWLEPGGRSIGVIDQIQLPHQFTTRTLRSCDEAAEAIRTMVVRGAPLIGVTGAYG 65
Query: 60 LV----VDIKDKQF-------------------------------PDNELIQLIE----S 80
L+ VD D P E + + +
Sbjct: 66 LMLALQVDPSDASLAAAFDQLNATRPTAVNLRWALERVRDRVAPLPPAERAEAAQVEAGA 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ ++D++ +AIG +G Q L P LNVLTHCN G LAT ++GTAL I H
Sbjct: 126 IADEDVAMCEAIGEHGLALFQELAAARPG-QTLNVLTHCNAGWLATVDWGTALAPIYKAH 184
Query: 138 GANKIVDIK-DKQFPDND--SLEKY 159
A + + D+ P N SL Y
Sbjct: 185 RAGLDIHVWVDETRPRNQGASLTAY 209
>gi|89098424|ref|ZP_01171308.1| translation initiation factor IF-2B subunit alpha [Bacillus sp.
NRRL B-14911]
gi|89086973|gb|EAR66090.1| translation initiation factor IF-2B subunit alpha [Bacillus sp.
NRRL B-14911]
Length = 349
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV-KSSLSEWAKASPVNTVKTRLIQLIES 210
D S K E L+YL S+RPTAVN+ A + + +L+E K PV +K +L +
Sbjct: 73 DFSSFYKNFKENLEYLASSRPTAVNLFWALQRMDERALAE--KDQPVALIKKKLEEEAHQ 130
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+ ++D + IG +G L D + VLTHCN G +ATA YGTAL
Sbjct: 131 IRKEDEEVCRMIGIHGLALLKD------GMGVLTHCNAGGIATARYGTALAPFYLAKEKG 184
Query: 271 KIGAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 185 WELKVYADETRPLLQGAR 202
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 98/229 (42%), Gaps = 67/229 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV-- 61
LQS+ Y+ +L ILDQ LLP ++ ++I VEDA+ AIK ++VRGAPAI I GLV
Sbjct: 6 LQSVTYDNGTLYILDQTLLPAVTEFLEITKVEDAWDAIKQLKVRGAPAIGIAAAYGLVLA 65
Query: 62 ------VDIKD--KQFPDN------------ELIQLIESMLEKDISDN------------ 89
VD K F +N L ++ M E+ +++
Sbjct: 66 ANKAPEVDFSSFYKNFKENLEYLASSRPTAVNLFWALQRMDERALAEKDQPVALIKKKLE 125
Query: 90 --------------KAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+ IG +G L D + VLTHCN G +ATA YGTAL
Sbjct: 126 EEAHQIRKEDEEVCRMIGIHGLALLKD------GMGVLTHCNAGGIATARYGTALA---- 175
Query: 136 LHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSV 184
K+K + L+ Y E L AR TA +++A V
Sbjct: 176 -----PFYLAKEKGW----ELKVYADETRPLLQGARLTAWELQQAGIDV 215
>gi|381168591|ref|ZP_09877785.1| 5-methylthioribose-1-phosphate isomerase (MTNA) [Phaeospirillum
molischianum DSM 120]
gi|380682451|emb|CCG42603.1| 5-methylthioribose-1-phosphate isomerase (MTNA) [Phaeospirillum
molischianum DSM 120]
Length = 366
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N+K A D + ++LS PV + ++D + N A+G NG
Sbjct: 86 LHATRPTAINLKWALDEMIAALSP----LPVADRIAAAYARAAEICDEDAAMNSALGDNG 141
Query: 227 AQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ + DL G ++N+LTHCN G LAT ++GTAL + A + ETR
Sbjct: 142 CRIIADLWAKKQAAGGERINLLTHCNAGWLATVDWGTALAPVYKAFNAGIPIHVWVDETR 201
Query: 282 PYNQGA 287
P NQGA
Sbjct: 202 PRNQGA 207
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 45/185 (24%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDK------ 67
++I+DQ LPH ++ + ++ DA AI+ M VRGAP I G+ + ++
Sbjct: 20 VEIIDQTRLPHDFVVLTLRSLADAETAIRDMWVRGAPLIGAAAAYGMALATREDATDAGL 79
Query: 68 -----------------QFPDNELIQLIESM----------------LEKDISDNKAIGR 94
++ +E+I + + ++D + N A+G
Sbjct: 80 AAAYARLHATRPTAINLKWALDEMIAALSPLPVADRIAAAYARAAEICDEDAAMNSALGD 139
Query: 95 NGAQALIDLNPRV-----SKLNVLTHCNTGSLATAEYGTALG-VIRSLHGANKIVDIKDK 148
NG + + DL + ++N+LTHCN G LAT ++GTAL V ++ + I D+
Sbjct: 140 NGCRIIADLWAKKQAAGGERINLLTHCNAGWLATVDWGTALAPVYKAFNAGIPIHVWVDE 199
Query: 149 QFPDN 153
P N
Sbjct: 200 TRPRN 204
>gi|171915683|ref|ZP_02931153.1| methylthioribose-1-phosphate isomerase [Verrucomicrobium spinosum
DSM 4136]
Length = 372
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKA 221
++ D L RPTAVN+ A D L E + S R L E + E+D+ +
Sbjct: 86 QRADQLKRTRPTAVNLAYAVDRHLRLLQEHPEPS---DFLPRAQALAEEIAEEDVQACRL 142
Query: 222 IGRNG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
IG++G +AL + P +N+LTHCN G LA ++G+A I + H A +
Sbjct: 143 IGQHGLHLIRALHENKPAGEPVNILTHCNAGWLAFVDHGSATAPIYAAHAAGVPVHVWVD 202
Query: 279 ETRPYNQGAR 288
ETRP NQGAR
Sbjct: 203 ETRPRNQGAR 212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 87/200 (43%), Gaps = 48/200 (24%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL- 60
+++Q E H ++I+DQL LP +LV++ +V + AIK M VRGA I G+
Sbjct: 9 RTVQLKPGEPHVIEIIDQLKLPWAFELVELRSVAEVAVAIKDMWVRGAGCIGATAGYGMW 68
Query: 61 -----------------------------------VVD-----IKDKQFPDNELIQ---L 77
VD +++ P + L + L
Sbjct: 69 LAALEATGEPDFHAAFRQRADQLKRTRPTAVNLAYAVDRHLRLLQEHPEPSDFLPRAQAL 128
Query: 78 IESMLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
E + E+D+ + IG++G +AL + P +N+LTHCN G LA ++G+A I
Sbjct: 129 AEEIAEEDVQACRLIGQHGLHLIRALHENKPAGEPVNILTHCNAGWLAFVDHGSATAPIY 188
Query: 135 SLHGANKIVDIK-DKQFPDN 153
+ H A V + D+ P N
Sbjct: 189 AAHAAGVPVHVWVDETRPRN 208
>gi|383788641|ref|YP_005473210.1| methylthioribose-1-phosphate isomerase [Caldisericum exile
AZM16c01]
gi|381364278|dbj|BAL81107.1| methylthioribose-1-phosphate isomerase [Caldisericum exile
AZM16c01]
Length = 345
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 21/165 (12%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG +R+ G+ + K K+ D YL SARPTAVN+ A
Sbjct: 55 AAYGMYLG-LRNFEGSTETFIQKAKELKD-------------YLDSARPTAVNLAWATKR 100
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + + SP + LI+ +++ +DI N IG G++ D + ++
Sbjct: 101 ILDKILSNGEKSPEELKQIALIEA-KNIENEDIERNFKIGEFGSELFTDGD------TIM 153
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
T CNTG LAT ++GTA VI+ K + ETRPY QGAR
Sbjct: 154 TICNTGELATIKHGTAFSVIKRSFEKYKNISVIALETRPYLQGAR 198
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 86/225 (38%), Gaps = 66/225 (29%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++S+ ++ L ILDQ LP V D ++AI M++RGAPAI + G+ +
Sbjct: 3 IRSLYFDGSILHILDQRYLPFEVIDVQCKTECDVWEAINKMKIRGAPAIGVAAAYGMYLG 62
Query: 64 IKDKQFPDNELIQ---------------------------------------------LI 78
+++ + IQ LI
Sbjct: 63 LRNFEGSTETFIQKAKELKDYLDSARPTAVNLAWATKRILDKILSNGEKSPEELKQIALI 122
Query: 79 ES--MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
E+ + +DI N IG G++ D + ++T CNTG LAT ++GTA VI+
Sbjct: 123 EAKNIENEDIERNFKIGEFGSELFTDGD------TIMTICNTGELATIKHGTAFSVIK-- 174
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
+ F ++ E YL AR TA +K A
Sbjct: 175 -----------RSFEKYKNISVIALETRPYLQGARLTAFELKEAG 208
>gi|294494991|ref|YP_003541484.1| translation initiation factor 2subunit beta I family (IF-2BI)
[Methanohalophilus mahii DSM 5219]
gi|292665990|gb|ADE35839.1| translation initiation factor 2B subunit I family (IF-2BI)
[Methanohalophilus mahii DSM 5219]
Length = 339
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESM 211
D +SL + + +++ RPTA+N+ V ++SE A ++ + +++
Sbjct: 70 DMESLLQDLKNATGIILATRPTAINLGWGVHRVIKAVSE---AYDTEGIRDIALNEAQAI 126
Query: 212 LEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS-LHGAN 270
++D+ NK +G++GA L D + V+THCN G LA ++GTALGV+RS +
Sbjct: 127 ADEDVQTNKTLGKHGASLLEDGD------TVMTHCNAGRLACVDWGTALGVVRSAVEQGK 180
Query: 271 KIGAAYCTETRPYNQGAR 288
I C ETRP NQG R
Sbjct: 181 DINVVAC-ETRPLNQGGR 197
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 40/166 (24%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
E +++++DQ LLP + ++ N+ +AIKS++VRGAPA+A G G+ + K
Sbjct: 9 ENSTVRMIDQTLLPVEYREIECENLAQLCEAIKSLRVRGAPALAAAGAYGIALASKLSSA 68
Query: 70 PDNE-LIQ-------------------------LIESMLEK-DISDNKAIGRNGAQALID 102
D E L+Q +I+++ E D + I N AQA+ D
Sbjct: 69 NDMESLLQDLKNATGIILATRPTAINLGWGVHRVIKAVSEAYDTEGIRDIALNEAQAIAD 128
Query: 103 LNPRVSKL-------------NVLTHCNTGSLATAEYGTALGVIRS 135
+ + +K V+THCN G LA ++GTALGV+RS
Sbjct: 129 EDVQTNKTLGKHGASLLEDGDTVMTHCNAGRLACVDWGTALGVVRS 174
>gi|315230389|ref|YP_004070825.1| methylthioribose-1-phosphate isomerase [Thermococcus barophilus MP]
gi|315183417|gb|ADT83602.1| methylthioribose-1-phosphate isomerase [Thermococcus barophilus MP]
Length = 353
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
+ L + RPTAVN+ A + +K + E + S + +K +++ + + ++D+ N +G
Sbjct: 94 EILKNTRPTAVNLFWALNRIKKLVEEHREDS-LAEIKRLIVREAQKIADEDVEANLRMGH 152
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+ L + NVLTHCN GSLAT GT V+R +H K+ + ETRP
Sbjct: 153 IGAEIL-------PEGNVLTHCNAGSLATVHLGTVGAVLRVMHKEGKLNLLWVDETRPVL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 41/179 (22%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV--- 61
+S+ Y + ++DQ LLP K++ ++ VE +AIK+MQVRGAPAI GL
Sbjct: 15 RSVEYRDKKVYLIDQRLLPREFKVISLSTVEQVAKAIKTMQVRGAPAIGAAAAFGLALYA 74
Query: 62 ----VDIKDKQF--------------PD--------NELIQLIESMLEKDISDNKAIGRN 95
+ KD+ F P N + +L+E E +++ K +
Sbjct: 75 ERSRAETKDEFFNGFYRAYEILKNTRPTAVNLFWALNRIKKLVEEHREDSLAEIKRLIVR 134
Query: 96 GAQAL----IDLNPRVSKL--------NVLTHCNTGSLATAEYGTALGVIRSLHGANKI 142
AQ + ++ N R+ + NVLTHCN GSLAT GT V+R +H K+
Sbjct: 135 EAQKIADEDVEANLRMGHIGAEILPEGNVLTHCNAGSLATVHLGTVGAVLRVMHKEGKL 193
>gi|409095431|ref|ZP_11215455.1| translation initiation factor IF-2B subunit beta [Thermococcus
zilligii AN1]
Length = 357
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + ++ L E SP+ +K ++ + + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIRK-LVEENLESPLEEIKGLIVNEAQKIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + NVLTHCN GSLAT + GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVMHRDGTLKLLWVDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 43/175 (24%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-- 62
+S+ YEK + ++DQ LP K V++ V+ +AI +++VRGAPAI GL +
Sbjct: 15 RSVRYEKGKVIMIDQTALPGEFKTVELGTVDQVAEAIVTLKVRGAPAIGASAAFGLALYA 74
Query: 63 -----DIKDKQFPD-----------------------NELIQLIESMLEKDISDNKAIGR 94
KD +F D N + +L+E LE + + K +
Sbjct: 75 DTTKAKTKD-EFMDGFYSAYERLKNTRPTAVNLFWALNRIRKLVEENLESPLEEIKGLIV 133
Query: 95 NGAQAL----IDLNPRVSKL--------NVLTHCNTGSLATAEYGTALGVIRSLH 137
N AQ + ++ N R+ NVLTHCN GSLAT + GT V+R +H
Sbjct: 134 NEAQKIADEDVEANLRMGHYGAEVLPEGNVLTHCNAGSLATVQLGTVGAVLRVMH 188
>gi|242278501|ref|YP_002990630.1| translation initiation factor, aIF-2BI family [Desulfovibrio
salexigens DSM 2638]
gi|259509709|sp|C6C0F7.1|MTNA_DESAD RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|242121395|gb|ACS79091.1| translation initiation factor, aIF-2BI family [Desulfovibrio
salexigens DSM 2638]
Length = 346
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 11/127 (8%)
Query: 164 LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQL--IESMLEKDISDNKA 221
LD + +ARPTAVN++ A +K WA+A V+ + I L + + DI +
Sbjct: 81 LDKIENARPTAVNLRWAVREMKRI---WAEAGDVSLDELCAIWLKRAKEIHVDDIRMCED 137
Query: 222 IGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
IG+ G + + D + ++THCN G+LATA YGTALGV+R K + ETR
Sbjct: 138 IGKFGGELMDDGD------TIMTHCNAGALATAGYGTALGVVRGAVDQGKKVSVIANETR 191
Query: 282 PYNQGAR 288
P+ QGAR
Sbjct: 192 PFLQGAR 198
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 85/222 (38%), Gaps = 65/222 (29%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV------- 62
EK +L +LDQ LP D +D +A+ M VRGAPAI + G +
Sbjct: 10 EKDALVLLDQRYLPTREDWFDCKTTDDIVEALVVMVVRGAPAIGVTAAYGCYLAGREVAG 69
Query: 63 --DIK-------DK-----------------------QFPDNELIQLIESMLEK------ 84
D K DK + D L +L L++
Sbjct: 70 SADWKAELEKNLDKIENARPTAVNLRWAVREMKRIWAEAGDVSLDELCAIWLKRAKEIHV 129
Query: 85 -DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
DI + IG+ G + + D + ++THCN G+LATA YGTALGV+R K V
Sbjct: 130 DDIRMCEDIGKFGGELMDDGD------TIMTHCNAGALATAGYGTALGVVRGAVDQGKKV 183
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+ E +L AR TA + R VK
Sbjct: 184 SV-------------IANETRPFLQGARLTAYELHRDGIPVK 212
>gi|365854547|ref|ZP_09394619.1| S-methyl-5-thioribose-1-phosphate isomerase [Acetobacteraceae
bacterium AT-5844]
gi|363720088|gb|EHM03380.1| S-methyl-5-thioribose-1-phosphate isomerase [Acetobacteraceae
bacterium AT-5844]
Length = 367
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 83/185 (44%), Gaps = 46/185 (24%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
S++ILDQ LP T ++ + + + AIKSMQVRGAP I V GL + ++ +
Sbjct: 19 SVRILDQTRLPWTVDILRLTDEQQVAHAIKSMQVRGAPLIGAVAAYGLALALRRDA--SD 76
Query: 73 ELIQLIESML-----------------------------------------EKDISDNKA 91
++ + +ML E D+ ++
Sbjct: 77 AALESVAAMLGETRPTAINLRWALARMLAELRPVPAEARVKAAYAAAGAIAEDDVETCRS 136
Query: 92 IGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DK 148
IG++G + ++ R +N+LTHCNTG +AT +YGTAL VI H A V + D+
Sbjct: 137 IGQHGLPLIQEIAARKPGKAVNILTHCNTGWIATVDYGTALSVIYQAHDAGIPVHVWVDE 196
Query: 149 QFPDN 153
P N
Sbjct: 197 TRPRN 201
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 27/169 (15%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
A A YG AL + R D D +S+ +GE RPTA+N++ A
Sbjct: 60 AVAAYGLALALRR---------DASDAAL---ESVAAMLGET-------RPTAINLRWAL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG---AQALIDLNPGVS 238
+ + L + P ++ E D+ ++IG++G Q + PG
Sbjct: 101 ARMLAEL----RPVPAEARVKAAYAAAGAIAEDDVETCRSIGQHGLPLIQEIAARKPG-K 155
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+N+LTHCNTG +AT +YGTAL VI H A + ETRP NQG+
Sbjct: 156 AVNILTHCNTGWIATVDYGTALSVIYQAHDAGIPVHVWVDETRPRNQGS 204
>gi|170744230|ref|YP_001772885.1| aIF-2BI family translation initiation factor [Methylobacterium sp.
4-46]
gi|168198504|gb|ACA20451.1| translation initiation factor, aIF-2BI family [Methylobacterium sp.
4-46]
Length = 365
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 24/166 (14%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
TA YG ALG+ ++ P + L ++ L + RPTAVN++ A D
Sbjct: 61 TAAYGLALGL---------------REDPSDAGLARFGA----MLAATRPTAVNLRWALD 101
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVS-KLN 241
+ ++L + P + + + E+D+++ +AIG++G++ + + ++
Sbjct: 102 RLGATL----RPLPPDIRAAQAFAEAGRIAEEDVANCRAIGQHGSRLIAEAARARGGRVT 157
Query: 242 VLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
VLTHCN G LAT ++GTAL I + H A ETRP NQGA
Sbjct: 158 VLTHCNAGWLATVDWGTALAPIYAAHDAGVPVHVLVDETRPRNQGA 203
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 41/179 (22%)
Query: 16 ILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD-------KQ 68
++DQ LP ++ + E+A +AI++M VRGAP I + GL + +++ +
Sbjct: 22 VIDQTRLPFAFEIRRLARAEEAAEAIRTMVVRGAPLIGVTAAYGLALGLREDPSDAGLAR 81
Query: 69 F-----------------------------PDNELIQLIES---MLEKDISDNKAIGRNG 96
F PD Q + E+D+++ +AIG++G
Sbjct: 82 FGAMLAATRPTAVNLRWALDRLGATLRPLPPDIRAAQAFAEAGRIAEEDVANCRAIGQHG 141
Query: 97 AQALIDL-NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI-KDKQFPDN 153
++ + + R ++ VLTHCN G LAT ++GTAL I + H A V + D+ P N
Sbjct: 142 SRLIAEAARARGGRVTVLTHCNAGWLATVDWGTALAPIYAAHDAGVPVHVLVDETRPRN 200
>gi|341581157|ref|YP_004761649.1| translation initiation factor IF-2B subunit beta [Thermococcus sp.
4557]
gi|340808815|gb|AEK71972.1| translation initiation factor IF-2B subunit beta [Thermococcus sp.
4557]
Length = 356
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGR 224
D L + RPTAVN+ A + +K L E P+ +K ++ + + ++D+ N +G
Sbjct: 94 DRLKNTRPTAVNLFWALNRIKK-LVEENLEGPLEEIKKLIVAEAQRIADEDVEANLRMGH 152
Query: 225 NGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYN 284
GA+AL + NVLTHCN GSLAT + GT V+R ++ + + ETRP
Sbjct: 153 YGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVMNRDGSLKLLWVDETRPVL 205
Query: 285 QGAR 288
QGAR
Sbjct: 206 QGAR 209
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ YE + ++DQ LLP K +++ V++ +AI +M+VRG
Sbjct: 15 RSVTYETGKVIMIDQRLLPGEFKTIELTTVDEVAEAIVTMKVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQF--PDNELIQLI-- 78
A+ + L + + ++ P E+ +LI
Sbjct: 75 DTSKAKTRDEFMDGFYSAYDRLKNTRPTAVNLFWALNRIKKLVEENLEGPLEEIKKLIVA 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+AL + NVLTHCN GSLAT + GT V+R +
Sbjct: 135 EAQRIADEDVEANLRMGHYGAEAL-------PEGNVLTHCNAGSLATVQLGTVGAVLRVM 187
Query: 137 H 137
+
Sbjct: 188 N 188
>gi|336236289|ref|YP_004588905.1| methylthioribose-1-phosphate isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720812|ref|ZP_17694994.1| S-methyl-5-thioribose-1-phosphate isomerase [Geobacillus
thermoglucosidans TNO-09.020]
gi|335363144|gb|AEH48824.1| Methylthioribose-1-phosphate isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|383366165|gb|EID43456.1| S-methyl-5-thioribose-1-phosphate isomerase [Geobacillus
thermoglucosidans TNO-09.020]
Length = 356
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 79/172 (45%), Gaps = 34/172 (19%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKY---VGEKLDYLVSARPTAVNMKR 179
TA YG AL R + +SLE + V + DYL S+RPTAVN+
Sbjct: 59 TAAYGLALAAQRY----------------ETESLETFKEHVRKDRDYLASSRPTAVNLFW 102
Query: 180 AADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSK 239
A D + SS+ A A VN KT LI + I D R G AL G
Sbjct: 103 ALDRLVSSI---AHAFSVNEAKTTLIH---EAIRIQIEDEDICRRIGEHALSLFQNGD-- 154
Query: 240 LNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA---AYCTETRPYNQGAR 288
+LT CN GS+ATA YGTAL + A + G Y +ETRP QGAR
Sbjct: 155 -RILTICNAGSIATARYGTALA---PFYLAKEKGIHLHVYASETRPVLQGAR 202
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 69/170 (40%), Gaps = 46/170 (27%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDI 64
+S+ + + IL+Q LP ++ + + ++ED ++AI +++VRGAPAI I GL +
Sbjct: 9 RSVEWNDTHITILNQQKLPLVTEYLQLKDIEDVWEAIATLKVRGAPAIGITAAYGLALAA 68
Query: 65 ----------------KDKQ--------------------------FPDNEL-IQLIESM 81
KD+ F NE LI
Sbjct: 69 QRYETESLETFKEHVRKDRDYLASSRPTAVNLFWALDRLVSSIAHAFSVNEAKTTLIHEA 128
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ I D R G AL + +LT CN GS+ATA YGTAL
Sbjct: 129 IRIQIEDEDICRRIGEHALSLFQ---NGDRILTICNAGSIATARYGTALA 175
>gi|188579909|ref|YP_001923354.1| translation initiation factor, aIF-2BI family [Methylobacterium
populi BJ001]
gi|218526915|sp|B1ZL76.1|MTNA_METPB RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|179343407|gb|ACB78819.1| translation initiation factor, aIF-2BI family [Methylobacterium
populi BJ001]
Length = 365
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 41/183 (22%)
Query: 12 HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD----- 66
+++ ++DQ LP +L + +++DA AI++M VRGAP I + GL + +++
Sbjct: 18 NAVTVIDQTRLPFAFELKRLASLDDAAVAIRTMVVRGAPLIGVTAAYGLALAMREDASEA 77
Query: 67 ------------------------------KQFPDNELIQLI----ESMLEKDISDNKAI 92
++ P+ E L S+ E+D++ +AI
Sbjct: 78 GIERAAATLAATRPTAINLRWALDRMAAVLRRAPEAERAALAFTEAASIAEEDVASCRAI 137
Query: 93 GRNGAQALIDLN-PRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQF 150
G +GA+ L ++ + +NVLTHCN G LAT ++GTAL I H A V + D+
Sbjct: 138 GEHGARILAEIAVKKGGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETR 197
Query: 151 PDN 153
P N
Sbjct: 198 PRN 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 210 SMLEKDISDNKAIGRNGAQALIDLNPGVSK---LNVLTHCNTGSLATAEYGTALGVIRSL 266
S+ E+D++ +AIG +GA+ L ++ V K +NVLTHCN G LAT ++GTAL I
Sbjct: 125 SIAEEDVASCRAIGEHGARILAEI--AVKKGGPVNVLTHCNAGWLATVDWGTALAPIYVA 182
Query: 267 HGANKIGAAYCTETRPYNQGA 287
H A + ETRP NQGA
Sbjct: 183 HDAGVPVHVFVDETRPRNQGA 203
>gi|325958448|ref|YP_004289914.1| translation initiation factor, aiF-2Bi family [Methanobacterium sp.
AL-21]
gi|325329880|gb|ADZ08942.1| translation initiation factor, aIF-2BI family [Methanobacterium sp.
AL-21]
Length = 314
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 24/122 (19%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML--EKDISDNKAIGRNG 226
+ARPTAVN+ A D V ++ S L E+ML ++D+ N+ IG+ G
Sbjct: 81 AARPTAVNLFWAVDRVLNADS----------------ALDEAMLMYDEDVETNRKIGKYG 124
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + D + +LTHCN G+LA +YGTALGV R+ K C ETRP QG
Sbjct: 125 ASIIDDGD------TLLTHCNAGALACVDYGTALGVFRAAKEEGKNINVICDETRPLCQG 178
Query: 287 AR 288
AR
Sbjct: 179 AR 180
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 32/169 (18%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L+++ ++ + L ++DQ LLP + N D AIK+M+VRGAPAI + + +
Sbjct: 5 NLKTMYWKDNKLFLIDQTLLPDQIVYHECENYHDVIDAIKTMKVRGAPAIGVSAAFAMAL 64
Query: 63 -------------DIKDKQFPDNELIQLIES-------------MLEKDISDNKAIGRNG 96
+IK + L ++ M ++D+ N+ IG+ G
Sbjct: 65 AELAGENMETAAKEIKAARPTAVNLFWAVDRVLNADSALDEAMLMYDEDVETNRKIGKYG 124
Query: 97 AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
A + D + +LTHCN G+LA +YGTALGV R+ K +++
Sbjct: 125 ASIIDDGD------TLLTHCNAGALACVDYGTALGVFRAAKEEGKNINV 167
>gi|414341449|ref|YP_006982970.1| methylthioribose-1-phosphate isomerase [Gluconobacter oxydans H24]
gi|411026784|gb|AFW00039.1| methylthioribose-1-phosphate isomerase [Gluconobacter oxydans H24]
Length = 364
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
S++I DQ P +++++ ++ AI+SMQVRGAP I V GLV ++D
Sbjct: 20 SIRIFDQTRFPWEVEVLELRDMGAVAHAIRSMQVRGAPLIGAVAAYGLVFALQDDASDAA 79
Query: 67 -----------------------------KQFPDNELIQL----IESMLEKDISDNKAIG 93
+ P I +++ ++D+ N+AIG
Sbjct: 80 LEKAAADLIETRPTAINLRWAIERMVKHLRSLPPERRIDAGYVEADAICDEDVQVNEAIG 139
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
R+G + + ++ R ++N+LTHCN G +AT ++GTAL I H
Sbjct: 140 RHGLELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAH 186
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L+ RPTA+N++ A + + L P + ++ +++ ++D+ N+AIGR+G
Sbjct: 87 LIETRPTAINLRWAIERMVKHLR---SLPPERRIDAGYVEA-DAICDEDVQVNEAIGRHG 142
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ + ++ ++N+LTHCN G +AT ++GTAL I H + ETRP
Sbjct: 143 LELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAHDEGIPVHVWVDETRPR 202
Query: 284 NQGA 287
NQG+
Sbjct: 203 NQGS 206
>gi|342214438|ref|ZP_08707133.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. oral
taxon 780 str. F0422]
gi|341593539|gb|EGS36375.1| S-methyl-5-thioribose-1-phosphate isomerase [Veillonella sp. oral
taxon 780 str. F0422]
Length = 350
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN+ A D V + + + + L++ ++ +D++ N+++ ++G
Sbjct: 85 LRQTRPTAVNLMWAIDRVLRIVDTFT--GDIGDLDAVLVKEAIAIDIEDVALNESMAKHG 142
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A D +LTHCN G+LATA GTALGVIR +H K+ Y ETRP QG
Sbjct: 143 ATLFQDKE----SYRILTHCNAGALATAGIGTALGVIREVHAQGKLDRVYADETRPLLQG 198
Query: 287 AR 288
+R
Sbjct: 199 SR 200
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 53/188 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++SI + + ILDQ LP + + V + +AIK ++VRGAPAI + GL++
Sbjct: 1 MKSIEWNGSEVIILDQTKLPASVEYVRCTDWRQVAEAIKMLRVRGAPAIGVSAAYGLILA 60
Query: 64 IKD---------------KQFPDN---------ELIQLIESMLE---------------- 83
++ + F + L+ I+ +L
Sbjct: 61 FRESYHRGGASAEILSEFRAFAETLRQTRPTAVNLMWAIDRVLRIVDTFTGDIGDLDAVL 120
Query: 84 ---------KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIR 134
+D++ N+++ ++GA D +LTHCN G+LATA GTALGVIR
Sbjct: 121 VKEAIAIDIEDVALNESMAKHGATLFQDKE----SYRILTHCNAGALATAGIGTALGVIR 176
Query: 135 SLHGANKI 142
+H K+
Sbjct: 177 EVHAQGKL 184
>gi|386399138|ref|ZP_10083916.1| S-methyl-5-thioribose-1-phosphate isomerase [Bradyrhizobium sp.
WSM1253]
gi|385739764|gb|EIG59960.1| S-methyl-5-thioribose-1-phosphate isomerase [Bradyrhizobium sp.
WSM1253]
Length = 369
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 165 DYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI--ESMLEKDISDNKAI 222
D LV ARPTA+N+K A D +++SL+ P++ ++ + + E+D+ N+ I
Sbjct: 84 DTLVVARPTAINLKWALDEMRASLA------PIDPLERAEAAYARADEIAEQDVEINRGI 137
Query: 223 GRNG---AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
NG +A++ +NVLTHCN G LAT ++GTA I H + E
Sbjct: 138 AGNGLKLIEAIVARKKPGETVNVLTHCNAGWLATVDWGTATAPIYLAHERGIKVHVWVDE 197
Query: 280 TRPYNQGA 287
TRP NQGA
Sbjct: 198 TRPRNQGA 205
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 44/180 (24%)
Query: 2 KSLQSIIYEK--HSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K +SI E+ S+ +DQ LPH + + + EDA AI+ M VRGAP I G
Sbjct: 6 KHFRSIWRERDGWSVGAIDQRRLPHEFIVAKLTSCEDAALAIRDMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKD-------KQFPDNELI--------------------------------QLIES 80
+ + +++ K+ D ++ +
Sbjct: 66 MALAMREDASDAGLKRAYDTLVVARPTAINLKWALDEMRASLAPIDPLERAEAAYARADE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+ E+D+ N+ I NG +A++ +NVLTHCN G LAT ++GTA I H
Sbjct: 126 IAEQDVEINRGIAGNGLKLIEAIVARKKPGETVNVLTHCNAGWLATVDWGTATAPIYLAH 185
>gi|453330730|dbj|GAC87476.1| methylthioribose-1-phosphate isomerase [Gluconobacter thailandicus
NBRC 3255]
Length = 364
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
S++I DQ P +++++ ++ AI+SMQVRGAP I V GLV ++D
Sbjct: 20 SIRIFDQTRFPWEVEVLELRDMGAVAHAIRSMQVRGAPLIGAVAAYGLVFALQDDASDAA 79
Query: 67 -----------------------------KQFPDNELIQL----IESMLEKDISDNKAIG 93
+ P I +++ ++D+ N+AIG
Sbjct: 80 LEKAAADLIETRPTAINLRWAIERMVKHLRSLPPERRIDAGYVEADAICDEDVQVNEAIG 139
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
R+G + + ++ R ++N+LTHCN G +AT ++GTAL I H
Sbjct: 140 RHGLELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAH 186
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L+ RPTA+N++ A + + L P + ++ +++ ++D+ N+AIGR+G
Sbjct: 87 LIETRPTAINLRWAIERMVKHLR---SLPPERRIDAGYVEA-DAICDEDVQVNEAIGRHG 142
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ + ++ ++N+LTHCN G +AT ++GTAL I H + ETRP
Sbjct: 143 LELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAHDEGIPVHVWVDETRPR 202
Query: 284 NQGA 287
NQG+
Sbjct: 203 NQGS 206
>gi|144899692|emb|CAM76556.1| Initiation factor 2B related [Magnetospirillum gryphiswaldense
MSR-1]
Length = 367
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 67/126 (53%), Gaps = 9/126 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N+K A D + ++L + P + + ++D++ N AIG NG
Sbjct: 86 LHATRPTAINLKWALDQMITALGK----VPEDQRMAAAYARAAEICDEDVAINSAIGDNG 141
Query: 227 A---QALID--LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
A QA + G ++NVLTHCN G LAT ++GTA+ I H A + ETR
Sbjct: 142 ATLIQAAWESARARGADRVNVLTHCNAGWLATVDWGTAIAPIYKAHDAGIPVHVWVDETR 201
Query: 282 PYNQGA 287
P NQGA
Sbjct: 202 PRNQGA 207
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 45/186 (24%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV---------- 62
+++I+DQ LPH V + ++ DA AIK+M VRGAP I G+ +
Sbjct: 19 AVEIIDQTRLPHELVNVRLESLADAAHAIKAMLVRGAPLIGATAAYGMALAARANSSDLA 78
Query: 63 -----DIKDKQFPDN-----ELIQLIESM-------------------LEKDISDNKAIG 93
+I P L Q+I ++ ++D++ N AIG
Sbjct: 79 LTVAYNILHATRPTAINLKWALDQMITALGKVPEDQRMAAAYARAAEICDEDVAINSAIG 138
Query: 94 RNGAQ----ALIDLNPR-VSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
NGA A R ++NVLTHCN G LAT ++GTA+ I H A V + D
Sbjct: 139 DNGATLIQAAWESARARGADRVNVLTHCNAGWLATVDWGTAIAPIYKAHDAGIPVHVWVD 198
Query: 148 KQFPDN 153
+ P N
Sbjct: 199 ETRPRN 204
>gi|192293663|ref|YP_001994268.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris
TIE-1]
gi|192287412|gb|ACF03793.1| translation initiation factor, aIF-2BI family [Rhodopseudomonas
palustris TIE-1]
Length = 374
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 71/126 (56%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
LV+ RPTA+N+K A D ++ +L A P + V + E + ++D++ N+AIG +G
Sbjct: 86 LVATRPTAINLKWALDEMRRAL---APVQPGDRVAAAYRRAGE-IADEDVAINQAIGASG 141
Query: 227 AQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ LI+ PG ++NVLTHCN G LAT ++GTA I A Y ETR
Sbjct: 142 LR-LIEAIAATKKPG-ERVNVLTHCNAGWLATVDWGTATAPIYQAFDAGIPIHVYADETR 199
Query: 282 PYNQGA 287
P NQGA
Sbjct: 200 PRNQGA 205
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 44/176 (25%)
Query: 2 KSLQSIIYEKHSLKI--LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K ++I E + +DQ LPH +V + + +DA AI++M VRGAP I G
Sbjct: 6 KHTRTIWLEADGWTVGTIDQRRLPHDYVVVKLTSSDDAADAIRTMLVRGAPLIGATAAYG 65
Query: 60 LVVDIKDK-----------------------QFPDNELIQLIE----------------S 80
+ + +++ ++ +E+ + +
Sbjct: 66 MALAMREDASDAGLDAAYAKLVATRPTAINLKWALDEMRRALAPVQPGDRVAAAYRRAGE 125
Query: 81 MLEKDISDNKAIGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ ++D++ N+AIG +G +A+ ++NVLTHCN G LAT ++GTA I
Sbjct: 126 IADEDVAINQAIGASGLRLIEAIAATKKPGERVNVLTHCNAGWLATVDWGTATAPI 181
>gi|254478527|ref|ZP_05091902.1| methylthioribose-1-phosphate isomerase [Carboxydibrachium pacificum
DSM 12653]
gi|214035535|gb|EEB76234.1| methylthioribose-1-phosphate isomerase [Carboxydibrachium pacificum
DSM 12653]
Length = 302
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 9/143 (6%)
Query: 148 KQF--PDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLI 205
+QF + ++ K + L+ L +RPTAVN+ A ++ L E K V+ + L
Sbjct: 22 QQFMKEEKENFLKNMENALNVLSKSRPTAVNLTWAIGRMRGVL-EKVKDLSVSDIYEALK 80
Query: 206 QLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ + +D+ NK + + G + + P +LTHCNTG+LAT YGTALGVIR
Sbjct: 81 EEANKIYFEDLETNKKMAKIGNEVI---KPNAV---ILTHCNTGALATVGYGTALGVIRE 134
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
H + K Y ETRP QGA+
Sbjct: 135 AHYSGKNIFVYADETRPRLQGAK 157
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
+D+ NK + + G + + P +LTHCNTG+LAT YGTALGVIR H + K
Sbjct: 89 EDLETNKKMAKIGNEVI---KPNAV---ILTHCNTGALATVGYGTALGVIREAHYSGK 140
>gi|86751795|ref|YP_488291.1| methylthioribose-1-phosphate isomerase [Rhodopseudomonas palustris
HaA2]
gi|86574823|gb|ABD09380.1| translation initiation factor 2B subunit I family (IF-2BI)
[Rhodopseudomonas palustris HaA2]
Length = 374
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 11/126 (8%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L++ RPTA+N+K A D ++ +L A P + V Q + ++D++ N+AIG +G
Sbjct: 86 LIATRPTAINLKWALDEMRRAL---APVKPADRVAA-AYQRAAEIADEDVAINQAIGAHG 141
Query: 227 AQALIDL-----NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETR 281
+ LI+ PG ++NVLTHCN G LAT ++GTA I Y ETR
Sbjct: 142 LK-LIEAIAARKKPG-ERVNVLTHCNAGWLATVDWGTATAPIYQAFDKGIAIHVYADETR 199
Query: 282 PYNQGA 287
P NQGA
Sbjct: 200 PRNQGA 205
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 42/163 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ---- 68
++ +DQ LPH + + N + A AI++M VRGAP I G+ + +++
Sbjct: 19 TVAAIDQRRLPHEYVVARLTNCDRAADAIRAMLVRGAPLIGATAAYGVALAMREDASDAA 78
Query: 69 --FPDNELI---------------------------------QLIESMLEKDISDNKAIG 93
N+LI Q + ++D++ N+AIG
Sbjct: 79 LAIAYNKLIATRPTAINLKWALDEMRRALAPVKPADRVAAAYQRAAEIADEDVAINQAIG 138
Query: 94 RNGAQALIDLNPRV---SKLNVLTHCNTGSLATAEYGTALGVI 133
+G + + + R ++NVLTHCN G LAT ++GTA I
Sbjct: 139 AHGLKLIEAIAARKKPGERVNVLTHCNAGWLATVDWGTATAPI 181
>gi|408382537|ref|ZP_11180081.1| translation initiation factor, aiF-2Bi family protein
[Methanobacterium formicicum DSM 3637]
gi|407814892|gb|EKF85515.1| translation initiation factor, aiF-2Bi family protein
[Methanobacterium formicicum DSM 3637]
Length = 309
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 24/136 (17%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
++ +EK E D ARPTAVN+ A D V +S +A L+ M
Sbjct: 64 DEDMEKAAQEMKD----ARPTAVNLFWAVDRVMASDDPLTEA------------LL--MY 105
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
E+D+ N+ +G +GA + + + +LTHCN G+LA ++GTALGVIR+ + K
Sbjct: 106 EEDMDTNRRMGMHGATVIDEGD------TILTHCNAGALACVDFGTALGVIRAANQEGKN 159
Query: 273 GAAYCTETRPYNQGAR 288
+ C ETRP QGAR
Sbjct: 160 ISVVCDETRPVLQGAR 175
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 32/149 (21%)
Query: 23 PHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------------DIKDKQF 69
PH ++ + +D AIK+M VRGAPAI + G+ + ++KD +
Sbjct: 20 PHETEYLICGTYQDVINAIKTMVVRGAPAIGVAAAFGMALAYLADEDMEKAAQEMKDARP 79
Query: 70 PDNELIQLIES-------------MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHC 116
L ++ M E+D+ N+ +G +GA + + + +LTHC
Sbjct: 80 TAVNLFWAVDRVMASDDPLTEALLMYEEDMDTNRRMGMHGATVIDEGD------TILTHC 133
Query: 117 NTGSLATAEYGTALGVIRSLHGANKIVDI 145
N G+LA ++GTALGVIR+ + K + +
Sbjct: 134 NAGALACVDFGTALGVIRAANQEGKNISV 162
>gi|338532564|ref|YP_004665898.1| methylthioribose-1-phosphate isomerase [Myxococcus fulvus HW-1]
gi|337258660|gb|AEI64820.1| methylthioribose-1-phosphate isomerase [Myxococcus fulvus HW-1]
Length = 361
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 43/180 (23%)
Query: 17 LDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG----LVVDIKD------ 66
+DQ LPH V + +EDA AI+SMQVRGAP I G L D D
Sbjct: 16 IDQTRLPHALVTVRLATLEDAAHAIRSMQVRGAPLIGATAAYGVWLALRADASDGALEQA 75
Query: 67 -------------------------KQFPDNELI----QLIESMLEKDISDNKAIGRNGA 97
P +E + + E++ ++D++ N+AIG +G
Sbjct: 76 LTVLRGTRPTAVNLHWALEDMRQMLAPLPASERVAAALRRAEAISDEDVAINRAIGAHGL 135
Query: 98 QALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFPDN 153
+ L + R +L+VLTHCN G LAT ++GTAL I H A V + D+ P N
Sbjct: 136 KLLEEAWARKGRQGRLDVLTHCNAGWLATVDFGTALSPIYQAHDAGIPVHVWVDETRPRN 195
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + + L L RPTAVN+ A + ++ L+ P + ++ E++ +
Sbjct: 66 DASDGALEQALTVLRGTRPTAVNLHWALEDMRQMLAP----LPASERVAAALRRAEAISD 121
Query: 214 KDISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+D++ N+AIG +G + L + +L+VLTHCN G LAT ++GTAL I H A
Sbjct: 122 EDVAINRAIGAHGLKLLEEAWARKGRQGRLDVLTHCNAGWLATVDFGTALSPIYQAHDAG 181
Query: 271 KIGAAYCTETRPYNQGAR 288
+ ETRP NQGA+
Sbjct: 182 IPVHVWVDETRPRNQGAQ 199
>gi|402815010|ref|ZP_10864603.1| methylthioribose-1-phosphate isomerase MtnA [Paenibacillus alvei
DSM 29]
gi|402507381|gb|EJW17903.1| methylthioribose-1-phosphate isomerase MtnA [Paenibacillus alvei
DSM 29]
Length = 366
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 154 DSLEKYVGE---KLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIES 210
D+ E + E YL S+RPTAVN+ A D +K+ L E + V +K L + E+
Sbjct: 81 DTYEAFAAEFNKAKQYLGSSRPTAVNLFWALDRMKARL-EREQGHSVAAIKEALRKEAEA 139
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+ +D ++IGR+ A +L+ N G+ LTHCN G++ATA+YGTAL I
Sbjct: 140 IRAEDEQVCESIGRH-ALSLLQPNWGI-----LTHCNAGAIATAKYGTALAPIHLGQEQG 193
Query: 271 KIGAAYCTETRPYNQGAR 288
Y ETRP QGAR
Sbjct: 194 YQFKVYADETRPLLQGAR 211
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 74/169 (43%), Gaps = 48/169 (28%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD--- 66
EK +L ILDQ LP+ + +++ +ED + AI ++VRGAPAI I G+ + +K
Sbjct: 21 EKDTLVILDQTRLPNETVYLELQKLEDIWDAIYHLKVRGAPAIGIAAAFGVYLAVKGSPA 80
Query: 67 -------------KQFPDNE------LIQLIESM---LEKD------------------- 85
KQ+ + L ++ M LE++
Sbjct: 81 DTYEAFAAEFNKAKQYLGSSRPTAVNLFWALDRMKARLEREQGHSVAAIKEALRKEAEAI 140
Query: 86 -ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
D + G AL L P +LTHCN G++ATA+YGTAL I
Sbjct: 141 RAEDEQVCESIGRHALSLLQP---NWGILTHCNAGAIATAKYGTALAPI 186
>gi|163850104|ref|YP_001638147.1| aIF-2BI family translation initiation factor [Methylobacterium
extorquens PA1]
gi|163661709|gb|ABY29076.1| translation initiation factor, aIF-2BI family [Methylobacterium
extorquens PA1]
Length = 365
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
D+ E + L + RPTA+N++ A D + + L + +P + + ++
Sbjct: 72 QDASEAGIERAATTLAATRPTAINLRWALDRMAAVL----RRAPESAREGLAFTEAAAIA 127
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D++ +AIG +GA+ L ++ +NVLTHCN G LAT ++GTAL I H A
Sbjct: 128 DEDVASCRAIGEHGAKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGV 187
Query: 272 IGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 188 PVHVFVDETRPRNQGA 203
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 41/182 (22%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
++ ++DQ LP +L + ++EDA AI++M VRGAP I + G+ + ++
Sbjct: 19 AVMVIDQTRLPFAFELKRLASLEDAAVAIRTMVVRGAPLIGVTAAYGMALAMRQDASEAG 78
Query: 67 -----------------------------KQFPDN--ELIQLIES--MLEKDISDNKAIG 93
++ P++ E + E+ + ++D++ +AIG
Sbjct: 79 IERAATTLAATRPTAINLRWALDRMAAVLRRAPESAREGLAFTEAAAIADEDVASCRAIG 138
Query: 94 RNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFP 151
+GA+ L ++ + +NVLTHCN G LAT ++GTAL I H A V + D+ P
Sbjct: 139 EHGAKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRP 198
Query: 152 DN 153
N
Sbjct: 199 RN 200
>gi|56419484|ref|YP_146802.1| methylthioribose-1-phosphate isomerase [Geobacillus kaustophilus
HTA426]
gi|375007906|ref|YP_004981539.1| methylthioribose-1-phosphate isomerase [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|81347803|sp|Q5L1E6.1|MTNA_GEOKA RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|56379326|dbj|BAD75234.1| translation initiation factor eIF-2B alpha subunit [Geobacillus
kaustophilus HTA426]
gi|359286755|gb|AEV18439.1| Methylthioribose-1-phosphate isomerase [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 355
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 72/143 (50%), Gaps = 18/143 (12%)
Query: 152 DNDSLEKY---VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
D +SL+++ + DYL SARPTAVN+ A D + ++ A A VN KT L+
Sbjct: 71 DTESLDEFRRRLKRDRDYLASARPTAVNLFWALDRLVTAA---ADALSVNEAKTTLVH-- 125
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHG 268
+ + D R G AL PG V+T CN GS+ATA YGTAL +
Sbjct: 126 -EAIRIQVEDEDVCRRIGEHALSLFRPGE---RVMTICNAGSIATARYGTALA---PFYL 178
Query: 269 ANKIG---AAYCTETRPYNQGAR 288
A + G + Y ETRP QGAR
Sbjct: 179 AKEKGIELSVYALETRPVLQGAR 201
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 46/170 (27%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG----- 59
+S+ + + + IL+Q LP + +D++ +ED Y+AI +++VRGAPAI I G
Sbjct: 8 RSVEWRETHVTILNQQKLPSIIEYIDLHTLEDVYEAIATLKVRGAPAIGITAAYGLALAA 67
Query: 60 --------------------------------------LVVDIKDKQFPDNELIQLIESM 81
LV D + L+
Sbjct: 68 LRYDTESLDEFRRRLKRDRDYLASARPTAVNLFWALDRLVTAAADALSVNEAKTTLVHEA 127
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALG 131
+ + D R G AL P V+T CN GS+ATA YGTAL
Sbjct: 128 IRIQVEDEDVCRRIGEHALSLFRP---GERVMTICNAGSIATARYGTALA 174
>gi|333910281|ref|YP_004484014.1| methylthioribose-1-phosphate isomerase [Methanotorris igneus Kol 5]
gi|333750870|gb|AEF95949.1| Methylthioribose-1-phosphate isomerase [Methanotorris igneus Kol 5]
Length = 328
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 44/179 (24%)
Query: 2 KSLQSIIYE--KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLG 59
K L+ II++ K L ++DQ LPH + ED AIK M VRGAPAI I G
Sbjct: 8 KDLRPIIWDDDKKELILIDQRKLPHKLEYFTCKTYEDVAFAIKDMVVRGAPAIGISAAYG 67
Query: 60 L---------------------------------VVDIKDKQFPDNELIQLIESMLEKDI 86
+ V+D DK +++ + + E+DI
Sbjct: 68 MALAEIHGEDIEKAYNTLKNTRPTAVNLFWALNRVMDAYDKG---RSILEEAKKIHEEDI 124
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+ IG G + + D + +LTHCN G+LA + YGTAL VIR H NK + +
Sbjct: 125 ETCRKIGEIGEKLIEDGD------TILTHCNAGALACSAYGTALSVIRFAHYNNKKIQV 177
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 16/122 (13%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + V + + +++ + + E+DI + IG G
Sbjct: 85 LKNTRPTAVNLFWALNRVMDAYDK----------GRSILEEAKKIHEEDIETCRKIGEIG 134
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ + D + +LTHCN G+LA + YGTAL VIR H NK ETRP QG
Sbjct: 135 EKLIEDGD------TILTHCNAGALACSAYGTALSVIRFAHYNNKKIQVIADETRPRLQG 188
Query: 287 AR 288
A+
Sbjct: 189 AK 190
>gi|58040038|ref|YP_192002.1| methylthioribose-1-phosphate isomerase [Gluconobacter oxydans 621H]
gi|81351752|sp|Q5FQK0.1|MTNA_GLUOX RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|58002452|gb|AAW61346.1| Translation initiation factor, aIF-2B alpha subunit [Gluconobacter
oxydans 621H]
Length = 368
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 42/178 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+SL + S++I DQ P +++++ +V AI SMQVRGAP I V GLV
Sbjct: 9 RSLWRPSDDASSIRIFDQTRFPWNVEILELRDVGAVADAITSMQVRGAPLIGAVAAYGLV 68
Query: 62 VDIKDKQFPDN----------------ELIQLIESML----------------------- 82
++D + L IE M+
Sbjct: 69 FALQDDASDEALEKAAAFLVATRPTAINLRWAIERMVARLKAVRPTERVAAGYVEADAIC 128
Query: 83 EKDISDNKAIGRNGAQALIDLNPRVSK---LNVLTHCNTGSLATAEYGTALGVIRSLH 137
++D+ N+AIGR+G + + ++ R K +N+LTHCN G +AT ++GTAL I H
Sbjct: 129 DEDVQVNEAIGRHGLELIREIWERKGKQGQVNLLTHCNAGWIATVDWGTALAPIYMAH 186
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
+++LEK +LV+ RPTA+N++ A + + + L P V ++ +++
Sbjct: 77 DEALEKAAA----FLVATRPTAINLRWAIERMVARLK---AVRPTERVAAGYVEA-DAIC 128
Query: 213 EKDISDNKAIGRNGAQALIDLNPGVSK---LNVLTHCNTGSLATAEYGTALGVIRSLHGA 269
++D+ N+AIGR+G + + ++ K +N+LTHCN G +AT ++GTAL I H
Sbjct: 129 DEDVQVNEAIGRHGLELIREIWERKGKQGQVNLLTHCNAGWIATVDWGTALAPIYMAHDE 188
Query: 270 NKIGAAYCTETRPYNQGA 287
+ ETRP NQG+
Sbjct: 189 GIPVHVWVDETRPRNQGS 206
>gi|410942922|ref|ZP_11374663.1| methylthioribose-1-phosphate isomerase [Gluconobacter frateurii
NBRC 101659]
Length = 364
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 42/178 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+SL + S++I DQ P +++++ ++ AI+SMQVRGAP I V GLV
Sbjct: 9 RSLWRPSDDAKSIRIFDQTRFPWEVEILELRDMGAVAHAIRSMQVRGAPLIGAVAAYGLV 68
Query: 62 VDIKDK------QFPDNELIQL----------IESML----------------------- 82
++D + +LI+ IE M+
Sbjct: 69 FALQDDASDAALEKAAADLIETRPTAINLRWAIERMVTHLRALPAERRVDAGYVEADAIC 128
Query: 83 EKDISDNKAIGRNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++D+ N+AIGR+G + + ++ R ++N+LTHCN G +AT ++GTAL I H
Sbjct: 129 DEDVQVNEAIGRHGLELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAH 186
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L+ RPTA+N++ A + + + L +A P +++ ++D+ N+AIGR+G
Sbjct: 87 LIETRPTAINLRWAIERMVTHL----RALPAERRVDAGYVEADAICDEDVQVNEAIGRHG 142
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
+ + ++ ++N+LTHCN G +AT ++GTAL I H + ETRP
Sbjct: 143 LELIREIWERKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAHDEGIPVHVWVDETRPR 202
Query: 284 NQGA 287
NQG+
Sbjct: 203 NQGS 206
>gi|385330970|ref|YP_005884921.1| translation initiation factor, aIF-2BI family [Marinobacter
adhaerens HP15]
gi|311694120|gb|ADP96993.1| translation initiation factor, aIF-2BI family [Marinobacter
adhaerens HP15]
Length = 354
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
+A YG AL R G + +IK + + L ++RPTAVN+ A
Sbjct: 66 SAAYGVALAA-RHAGGGDWKAEIK---------------QAIRELAASRPTAVNLFWALQ 109
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
++ ++ RL ++ E+D++ N A+ A ++ + +V
Sbjct: 110 RMERIFH---ACHSLDEAVKRLASEARAIHEEDLAANFAM----ADHALEFIGAEAPFSV 162
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTG+LAT YGTALGV+R L+ + Y ETRP+ QG R
Sbjct: 163 LTHCNTGALATGGYGTALGVVRRLYEEKLLADVYADETRPWLQGGR 208
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 88/213 (41%), Gaps = 52/213 (24%)
Query: 6 SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK 65
+I + SL++LDQ LLP + + Q+I+ M VRGAPAI I G+ + +
Sbjct: 17 AIRWHGSSLELLDQRLLPGEEHWITLEGAAGVAQSIRDMVVRGAPAIGISAAYGVALAAR 76
Query: 66 DKQFPD---------NEL-------------IQLIESMLEKDISDNKAIGRNGAQA---- 99
D EL +Q +E + S ++A+ R ++A
Sbjct: 77 HAGGGDWKAEIKQAIRELAASRPTAVNLFWALQRMERIFHACHSLDEAVKRLASEARAIH 136
Query: 100 -------------LIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK 146
++ + +VLTHCNTG+LAT YGTALGV+R L+ + D+
Sbjct: 137 EEDLAANFAMADHALEFIGAEAPFSVLTHCNTGALATGGYGTALGVVRRLYEEKLLADV- 195
Query: 147 DKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
Y E +L R TA + R
Sbjct: 196 ------------YADETRPWLQGGRLTAWELSR 216
>gi|88861248|ref|ZP_01135880.1| putative translation initiation factor EIF-2B [Pseudoalteromonas
tunicata D2]
gi|88816729|gb|EAR26552.1| putative translation initiation factor EIF-2B [Pseudoalteromonas
tunicata D2]
Length = 340
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L ARPTAVN+ D + +L + + + L + E++ E+DI+ ++ G
Sbjct: 82 LRQARPTAVNLMHCMDKMSIALEQ-------DDYELALQRCAEAIFEQDIALCNSMANFG 134
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
+ + + + N+LTHCNTG+LATA GTALGVI H ANK + ETRP QG
Sbjct: 135 NELVQEGD------NILTHCNTGALATAGIGTALGVIYKAHQANKKIHVWVDETRPLLQG 188
Query: 287 AR 288
R
Sbjct: 189 GR 190
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 94/218 (43%), Gaps = 59/218 (27%)
Query: 1 MKSL--QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
MK+L S+ Y+ + L +LDQ LPH +V D IK++++RGAP I I L
Sbjct: 1 MKNLLAASLKYQDNQLFVLDQYALPHQENWRLCQSVADMESLIKALKIRGAPLIGIGASL 60
Query: 59 GLVVDIKDKQFPDNELIQLI-------------------------------------ESM 81
LV + +Q +L Q I E++
Sbjct: 61 -LVAHLASEQQSKAQLAQAIAQLRQARPTAVNLMHCMDKMSIALEQDDYELALQRCAEAI 119
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
E+DI+ ++ G + + + + N+LTHCNTG+LATA GTALGVI H ANK
Sbjct: 120 FEQDIALCNSMANFGNELVQEGD------NILTHCNTGALATAGIGTALGVIYKAHQANK 173
Query: 142 IVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
+ + +V E L R TA ++R
Sbjct: 174 KIHV-------------WVDETRPLLQGGRLTAYELER 198
>gi|48477333|ref|YP_023039.1| translation initiation factor IF-2 [Picrophilus torridus DSM 9790]
gi|48429981|gb|AAT42846.1| archaeal protein translation initiation factor 2B subunit 1
[Picrophilus torridus DSM 9790]
Length = 338
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 80/155 (51%), Gaps = 24/155 (15%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
K++ ++ YE + +K++DQ +P ++++ N D Y AI+ M VRGAPAI + GL
Sbjct: 10 KTVLAVWYEDNKVKLIDQRKIPDEISIIELKNSNDVYNAIRDMAVRGAPAIGVTAAYGLA 69
Query: 62 VDIKDKQFPDN-------------ELIQLIESMLEKDISDNKAIGRNGAQALIDLNPRVS 108
+ K+ + + +L + I+ M + + S++ A R A + + + ++
Sbjct: 70 MAKKNNEDMEKAVELIRSSRPTAYDLFKAIDYMKKNNFSESAA--RRYALEITERSKKIG 127
Query: 109 KL---------NVLTHCNTGSLATAEYGTALGVIR 134
+ +LTHCN G+LA ++GTA+ +R
Sbjct: 128 EYGNELIKNGDRILTHCNAGALAVVDWGTAIAPMR 162
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 26/138 (18%)
Query: 152 DNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK-SSLSEWAKASPVNTVKTRLIQLIES 210
+N+ +EK V + + S+RPTA ++ +A D +K ++ SE A + +++ E
Sbjct: 74 NNEDMEKAV----ELIRSSRPTAYDLFKAIDYMKKNNFSESA-------ARRYALEITER 122
Query: 211 MLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+K IG G + + + + +LTHCN G+LA ++GTA+ +R +
Sbjct: 123 --------SKKIGEYGNELIKNGD------RILTHCNAGALAVVDWGTAIAPMRIAKDSG 168
Query: 271 KIGAAYCTETRPYNQGAR 288
K Y ETRP QGAR
Sbjct: 169 KNIFVYVDETRPRLQGAR 186
>gi|118595045|ref|ZP_01552392.1| translation initiation factor IF-2B subunit alpha [Methylophilales
bacterium HTCC2181]
gi|118440823|gb|EAV47450.1| translation initiation factor IF-2B subunit alpha [Methylophilales
bacterium HTCC2181]
Length = 310
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L++ RPTA+N+ A + +L A+P + K + L++SM ++D+S N+ IG G
Sbjct: 44 LLATRPTAINLAWAVTRLCHAL----LATPEHQRKDKAWDLVQSMADEDVSINRRIGLAG 99
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
L ++ + +NVLTHCN G LAT ++GTAL I + ETRP NQG
Sbjct: 100 LTLLEPIDKPI--INVLTHCNAGWLATIDFGTALSPIYEAKAKGLAIHVWVDETRPRNQG 157
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 43/134 (32%)
Query: 40 AIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDNEL------------------------- 74
AI +MQVRGAP I + G+ + D DN +
Sbjct: 4 AITTMQVRGAPLIGVSAAFGIALACND-NVSDNAIERAKLSLLATRPTAINLAWAVTRLC 62
Query: 75 ---------------IQLIESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTG 119
L++SM ++D+S N+ IG G L ++ + +NVLTHCN G
Sbjct: 63 HALLATPEHQRKDKAWDLVQSMADEDVSINRRIGLAGLTLLEPIDKPI--INVLTHCNAG 120
Query: 120 SLATAEYGTALGVI 133
LAT ++GTAL I
Sbjct: 121 WLATIDFGTALSPI 134
>gi|114328058|ref|YP_745215.1| methylthioribose-1-phosphate isomerase [Granulibacter bethesdensis
CGDNIH1]
gi|114316232|gb|ABI62292.1| methylthioribose salvage protein [Granulibacter bethesdensis
CGDNIH1]
Length = 362
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 39/164 (23%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPD- 71
S++I+DQ LP + L+ ++ ++ AI+SMQVRGAP I V GL + ++D D
Sbjct: 19 SVRIIDQTKLPWSVDLLRLSRLDQVAHAIRSMQVRGAPLIGAVAAYGLCLALRDNATTDA 78
Query: 72 ----------------------NELIQLIESMLEKD----------------ISDNKAIG 93
+ ++ + + E D + N+AIG
Sbjct: 79 MERAAVLLAETRPTAVNLRWAIDRMLARLRTTSEADRVAIAYDEAAAIADEDAAQNEAIG 138
Query: 94 RNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
R+G + + D +N+LTHCN G LAT ++GTAL I H
Sbjct: 139 RHGLELIRDRVRPGQPVNILTHCNAGWLATVDWGTALAPIYMAH 182
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L RPTAVN++ A D + + L ++A V + + + N+AIGR+G
Sbjct: 86 LAETRPTAVNLRWAIDRMLARLRTTSEADRVAIAYDEAAAIADEDAAQ----NEAIGRHG 141
Query: 227 AQALID-LNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
+ + D + PG +N+LTHCN G LAT ++GTAL I H + ETRP NQ
Sbjct: 142 LELIRDRVRPG-QPVNILTHCNAGWLATVDWGTALAPIYMAHEEGIDVHVWVDETRPRNQ 200
Query: 286 GA 287
GA
Sbjct: 201 GA 202
>gi|18977721|ref|NP_579078.1| translation initiation factor IF-2 [Pyrococcus furiosus DSM 3638]
gi|397651840|ref|YP_006492421.1| translation initiation factor IF-2 [Pyrococcus furiosus COM1]
gi|25090199|sp|Q8U178.1|MTNA_PYRFU RecName: Full=Putative methylthioribose-1-phosphate isomerase;
Short=M1Pi; Short=MTR-1-P isomerase; AltName:
Full=MTNA-like protein; Short=aMTNA; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|18893456|gb|AAL81473.1| translation initiation factor eIF-2 beta chain [Pyrococcus furiosus
DSM 3638]
gi|393189431|gb|AFN04129.1| translation initiation factor IF-2B subunit beta [Pyrococcus
furiosus COM1]
Length = 356
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 67/122 (54%), Gaps = 8/122 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTAVN+ A + +K + E + S ++ +K +++ + + ++D+ N +G G
Sbjct: 96 LKNTRPTAVNLFWALNRIKKLVEEHREDS-LDEIKRLIVEEAQKIADEDVEANLRMGHYG 154
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + N+LTHCN GSLAT GT V+R +H + + ETRP QG
Sbjct: 155 AEVL-------PEGNILTHCNAGSLATVHLGTVGAVVRVMHKEGTLKLLWLDETRPVLQG 207
Query: 287 AR 288
AR
Sbjct: 208 AR 209
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 55/181 (30%)
Query: 5 QSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRG---------------- 48
+S+ Y + + +++Q LLP K+ + VE +AIK+M VRG
Sbjct: 15 RSVEYREGKVYMINQRLLPREFKVEEFTTVEAVAEAIKNMTVRGAPAIGAAAAFGLALYA 74
Query: 49 --------------------------APAIAIVGCLGLVVDIKDKQFPD--NELIQLI-- 78
A+ + L + + ++ D +E+ +LI
Sbjct: 75 ETSKAKTKDEFFDGFYRAYETLKNTRPTAVNLFWALNRIKKLVEEHREDSLDEIKRLIVE 134
Query: 79 --ESMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
+ + ++D+ N +G GA+ L + N+LTHCN GSLAT GT V+R +
Sbjct: 135 EAQKIADEDVEANLRMGHYGAEVL-------PEGNILTHCNAGSLATVHLGTVGAVVRVM 187
Query: 137 H 137
H
Sbjct: 188 H 188
>gi|218528708|ref|YP_002419524.1| translation initiation factor, aIF-2BI family [Methylobacterium
extorquens CM4]
gi|254813652|sp|B7KZ66.1|MTNA_METC4 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|218521011|gb|ACK81596.1| translation initiation factor, aIF-2BI family [Methylobacterium
extorquens CM4]
Length = 365
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 5/122 (4%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N++ A D + + L + +P + + ++ ++D++ +AIG +G
Sbjct: 86 LAATRPTAINLRWALDRMAAVL----RRAPESAREALAFTEAAAIADEDVASCRAIGEHG 141
Query: 227 AQALIDLNPGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
A+ L ++ +NVLTHCN G LAT ++GTAL I H A + ETRP NQ
Sbjct: 142 AKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRPRNQ 201
Query: 286 GA 287
GA
Sbjct: 202 GA 203
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 41/182 (22%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
++ ++DQ LP +L + N++DA AI++M VRGAP I + G+ + ++
Sbjct: 19 AVMVIDQTRLPFAFELKRLTNLDDAAVAIRTMVVRGAPLIGVTAAYGMALAMRQDASEAG 78
Query: 67 -----------------------------KQFPDN--ELIQLIES--MLEKDISDNKAIG 93
++ P++ E + E+ + ++D++ +AIG
Sbjct: 79 IERASATLAATRPTAINLRWALDRMAAVLRRAPESAREALAFTEAAAIADEDVASCRAIG 138
Query: 94 RNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFP 151
+GA+ L ++ + +NVLTHCN G LAT ++GTAL I H A V + D+ P
Sbjct: 139 EHGAKILSEIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRP 198
Query: 152 DN 153
N
Sbjct: 199 RN 200
>gi|331003886|ref|ZP_08327377.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae oral
taxon 107 str. F0167]
gi|330411986|gb|EGG91384.1| S-methyl-5-thioribose-1-phosphate isomerase [Lachnospiraceae oral
taxon 107 str. F0167]
Length = 363
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 8/145 (5%)
Query: 149 QFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI 208
Q D +S ++ E +Y S+RPTAVN+ A + ++ +L ++ + +K L +
Sbjct: 75 QASDYESFKREFLELKEYFASSRPTAVNLFWALNRMEEALKANSEKG-IEEIKEALFKEA 133
Query: 209 ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTA-----LGVI 263
E++ +DI ++ IG G + L L + ++THCN G+LATA+YGTA + +
Sbjct: 134 ENIRNEDIEISRGIGELGFKLLKKLKRNDKVIGIMTHCNAGTLATAKYGTATAPMYMALE 193
Query: 264 RSLHGANKIGAAYCTETRPYNQGAR 288
G + YC ETRP QGAR
Sbjct: 194 NGFSGEDM--HVYCDETRPLLQGAR 216
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 48/164 (29%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL-----VVDIKDKQ 68
L I+DQ LLP K +++N E+ ++AIK ++VRGAPAI + G+ + D +
Sbjct: 21 LNIIDQTLLPGEIKRINLNTKEEIWEAIKKLRVRGAPAIGVCAAYGIAKTASFIQASDYE 80
Query: 69 FPDNELIQL--------------------------------IESMLE-----------KD 85
E ++L IE + E +D
Sbjct: 81 SFKREFLELKEYFASSRPTAVNLFWALNRMEEALKANSEKGIEEIKEALFKEAENIRNED 140
Query: 86 ISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTA 129
I ++ IG G + L L + ++THCN G+LATA+YGTA
Sbjct: 141 IEISRGIGELGFKLLKKLKRNDKVIGIMTHCNAGTLATAKYGTA 184
>gi|452203364|ref|YP_007483497.1| methylthioribose-1-phosphate isomerase [Dehalococcoides mccartyi
DCMB5]
gi|452110423|gb|AGG06155.1| methylthioribose-1-phosphate isomerase [Dehalococcoides mccartyi
DCMB5]
Length = 332
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
+ S RPTA N+ A + + + A + V+ VK L+ + ++ ++ I G
Sbjct: 83 IASTRPTAKNLFMAVERMDHVV---ASGTDVSQVKISLVDEALKIHREEEEASRKISTFG 139
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A + PG VLTHCN G LATA YGTALGVI + H NK +A+ TETRP QG
Sbjct: 140 ADLI---QPG---WTVLTHCNAGPLATAGYGTALGVIIAAHQQNKGISAFATETRPLLQG 193
Query: 287 AR 288
AR
Sbjct: 194 AR 195
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 93/222 (41%), Gaps = 53/222 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV- 62
+++I + + L ILDQ LLP K +++N+ +AIK+++VRGAP+I + G+ +
Sbjct: 1 MKAIEWRNNRLIILDQTLLPLEEKYLELNDYHAVAEAIKTLRVRGAPSIGVAAAYGIALG 60
Query: 63 ---------------------DIKDKQFPDNELIQLIESMLE-----KDISDNK------ 90
+I + L +E M D+S K
Sbjct: 61 ALSIETRYCSEFLPLYQQISAEIASTRPTAKNLFMAVERMDHVVASGTDVSQVKISLVDE 120
Query: 91 --AIGRNGAQALIDLNPRVSKL-----NVLTHCNTGSLATAEYGTALGVIRSLHGANKIV 143
I R +A ++ + L VLTHCN G LATA YGTALGVI + H NK
Sbjct: 121 ALKIHREEEEASRKISTFGADLIQPGWTVLTHCNAGPLATAGYGTALGVIIAAHQQNK-- 178
Query: 144 DIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+ + E L AR TA+ +K A K
Sbjct: 179 -----------GISAFATETRPLLQGARLTALELKEAGVPFK 209
>gi|421076059|ref|ZP_15537061.1| Methylthioribose-1-phosphate isomerase [Pelosinus fermentans JBW45]
gi|392525918|gb|EIW49042.1| Methylthioribose-1-phosphate isomerase [Pelosinus fermentans JBW45]
Length = 349
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 155 SLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEK 214
S+E+ E L RPTAVN+ A + + S + + + + + L + S+ +
Sbjct: 74 SIERVAEE----LRQTRPTAVNLFWAIERMMSIIHKANRDKDIIDLVKDLEKEAISIASE 129
Query: 215 DISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGA 274
D + N I + GAQ N VS +LTHCN G+LATA +GTALGVIR KI
Sbjct: 130 DCAMNHKISQYGAQLF---NEPVS---ILTHCNAGALATAGFGTALGVIRQAFSEGKITR 183
Query: 275 AYCTETRPYNQGAR 288
+ ETRP QGAR
Sbjct: 184 VFADETRPLLQGAR 197
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 53/189 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------G 48
LQ+I ++ +L +LDQ LLP+ + ++ +N + QAIK ++VR G
Sbjct: 2 LQTIEWKNSTLWLLDQTLLPNRIEFIECHNFQRVAQAIKRLEVRGAPAIGAAAAFGLVLG 61
Query: 49 A-------------------------PAIAIVGCLGLVVDIKDKQFPDNELIQLIE---- 79
A A+ + + ++ I K D ++I L++
Sbjct: 62 AKELCNDSDFGTSIERVAEELRQTRPTAVNLFWAIERMMSIIHKANRDKDIIDLVKDLEK 121
Query: 80 ---SMLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSL 136
S+ +D + N I + GAQ N VS +LTHCN G+LATA +GTALGVIR
Sbjct: 122 EAISIASEDCAMNHKISQYGAQL---FNEPVS---ILTHCNAGALATAGFGTALGVIRQA 175
Query: 137 HGANKIVDI 145
KI +
Sbjct: 176 FSEGKITRV 184
>gi|257791152|ref|YP_003181758.1| translation initiation factor, aIF-2BI family [Eggerthella lenta
DSM 2243]
gi|325832893|ref|ZP_08165566.1| S-methyl-5-thioribose-1-phosphate isomerase [Eggerthella sp. HGA1]
gi|257475049|gb|ACV55369.1| translation initiation factor, aIF-2BI family [Eggerthella lenta
DSM 2243]
gi|325485758|gb|EGC88222.1| S-methyl-5-thioribose-1-phosphate isomerase [Eggerthella sp. HGA1]
Length = 354
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 167 LVSARPTAVNMKRAADSV-KSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
+ ARPTAVN++ A + V + + V L + M +D + N+AIG +
Sbjct: 103 IACARPTAVNLRWAVERVLGRARVALDGGAAPAAVADALFAEAKRMEAEDEAANRAIGAH 162
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA L + VLTHCN GSLATA YGTALGV+ + KI Y ETRP Q
Sbjct: 163 GAALLRQGS------RVLTHCNAGSLATAFYGTALGVVYAAAEQGKIERVYADETRPVGQ 216
Query: 286 GAR 288
GAR
Sbjct: 217 GAR 219
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
M +D + N+AIG +GA AL+ RV LTHCN GSLATA YGTALGV+ +
Sbjct: 148 MEAEDEAANRAIGAHGA-ALLRQGSRV-----LTHCNAGSLATAFYGTALGVVYAAAEQG 201
Query: 141 KI 142
KI
Sbjct: 202 KI 203
>gi|291616427|ref|YP_003519169.1| hypothetical Protein PANA_0874 [Pantoea ananatis LMG 20103]
gi|291151457|gb|ADD76041.1| Hypothetical Protein PANA_0874 [Pantoea ananatis LMG 20103]
Length = 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ + L+ L +ARPTAVN+ D +K +L + + + + RL+Q + + ++
Sbjct: 75 LAQSLEILWAARPTAVNLMNNLDRMKQALEQPDRVTSLAEEALRLVQEDKQLCDRIAEAG 134
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
++ + G+Q +LTHCNTG LATA GTALGVI H K+ + E
Sbjct: 135 NSLVKPGSQ-------------LLTHCNTGGLATAGVGTALGVIARAHQEGKVRNVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC- 57
M++ Q S+ + L ILDQ LP + ++V + I +++VRGAP I +
Sbjct: 1 MQTFQTTSLQVRNNQLWILDQQALPQQKNWLPAHSVAQLVEHIHALRVRGAPLIGLSASL 60
Query: 58 --------------LGLVVDIKDKQFPD-----NELIQLIESMLEKD------------I 86
L ++I P N L ++ +++ + D +
Sbjct: 61 LLALLAEQGETREQLAQSLEILWAARPTAVNLMNNLDRMKQALEQPDRVTSLAEEALRLV 120
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
++K + A+A L S+L LTHCNTG LATA GTALGVI H K+ ++
Sbjct: 121 QEDKQLCDRIAEAGNSLVKPGSQL--LTHCNTGGLATAGVGTALGVIARAHQEGKVRNV 177
>gi|427707519|ref|YP_007049896.1| methylthioribose-1-phosphate isomerase [Nostoc sp. PCC 7107]
gi|427360024|gb|AFY42746.1| methylthioribose-1-phosphate isomerase [Nostoc sp. PCC 7107]
Length = 362
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 83/165 (50%), Gaps = 10/165 (6%)
Query: 124 AEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADS 183
A YG LG R + ++ ++ D++ + LE L RPTAVN+ A +
Sbjct: 60 AAYGMYLGA-REIITSDAFGNVFDERTEFLNKLEIVA----QLLRETRPTAVNLFWAINR 114
Query: 184 VKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ + A V +K L +++ +D+ +A+G +G L L KL +L
Sbjct: 115 MLKTAH--ATLGSVEDIKQVLFHTAQAINAEDLQTCQAMGDHG---LTVLPKTPEKLTLL 169
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G+LATA YGTALGV+RS ++ + ETRP QGA+
Sbjct: 170 THCNAGALATAGYGTALGVVRSAWREGRLERLFADETRPRLQGAK 214
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 52/181 (28%)
Query: 7 IIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD 66
+I+ +S+ ++DQ LP+ V+I+ ED AIK+M VRGAPAI + G+ + ++
Sbjct: 11 VIWHNNSVSLIDQTRLPNEYAFVEIHRSEDMALAIKTMIVRGAPAIGVAAAYGMYLGARE 70
Query: 67 --------------KQFPDN----------------ELIQLIESMLEK------DISDNK 90
+F + L I ML+ + D K
Sbjct: 71 IITSDAFGNVFDERTEFLNKLEIVAQLLRETRPTAVNLFWAINRMLKTAHATLGSVEDIK 130
Query: 91 AIGRNGAQAL---------------IDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIR 134
+ + AQA+ + + P+ KL +LTHCN G+LATA YGTALGV+R
Sbjct: 131 QVLFHTAQAINAEDLQTCQAMGDHGLTVLPKTPEKLTLLTHCNAGALATAGYGTALGVVR 190
Query: 135 S 135
S
Sbjct: 191 S 191
>gi|383641325|ref|ZP_09953731.1| methylthioribose-1-phosphate isomerase [Sphingomonas elodea ATCC
31461]
Length = 348
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
LV RPTA+N++ A D V+++++ P +++ ++D + +AIG +G
Sbjct: 86 LVETRPTAINLRWALDQVRAAVAP----LPEAERAAAAFDRADAICDEDAALCRAIGAHG 141
Query: 227 AQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
L DL N G LN+LTHCN G LAT +YGTA I H A + ETRP
Sbjct: 142 LALLRDLHARNAG-RPLNILTHCNAGWLATVDYGTATAPIYLAHDAGIPVHVWVDETRPR 200
Query: 284 NQGA 287
NQGA
Sbjct: 201 NQGA 204
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 42/186 (22%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQF 69
+ ++ILDQ LP + V++ +++ A AI+ M RGAP I GL + +
Sbjct: 16 DGQGIRILDQRQLPWEIRWVELRSLDAAAVAIREMWTRGAPMIGATAAYGLAMALAVDAR 75
Query: 70 PDNELI---QLIES------------------------------------MLEKDISDNK 90
L+E+ + ++D + +
Sbjct: 76 DAALAAAYATLVETRPTAINLRWALDQVRAAVAPLPEAERAAAAFDRADAICDEDAALCR 135
Query: 91 AIGRNGAQALIDLNPRVS--KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
AIG +G L DL+ R + LN+LTHCN G LAT +YGTA I H A V + D
Sbjct: 136 AIGAHGLALLRDLHARNAGRPLNILTHCNAGWLATVDYGTATAPIYLAHDAGIPVHVWVD 195
Query: 148 KQFPDN 153
+ P N
Sbjct: 196 ETRPRN 201
>gi|357030662|ref|ZP_09092606.1| methylthioribose-1-phosphate isomerase [Gluconobacter morbifer
G707]
gi|356415356|gb|EHH68999.1| methylthioribose-1-phosphate isomerase [Gluconobacter morbifer
G707]
Length = 365
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 154 DSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLE 213
D+ + + + + LV+ RPTA+N++ A + + LS + SP V + +++ +
Sbjct: 74 DASDATLAKAAEDLVATRPTAINLRWAIERMVRHLSPF---SPAERVAAGYAEA-DALCD 129
Query: 214 KDISDNKAIGRNGAQ---ALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 270
+D+ N+AIGR+G + + D ++N+LTHCN G +AT ++GTAL I H
Sbjct: 130 EDLQVNEAIGRHGLELIREIWDRKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAHDEG 189
Query: 271 KIGAAYCTETRPYNQGA 287
+ ETRP NQG+
Sbjct: 190 IPVHVWVDETRPRNQGS 206
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 42/178 (23%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+S+ + S++I DQ P +++ + + AI++MQVRGAP I V GLV
Sbjct: 9 RSIWRPADDAQSIRIFDQTRFPWNVEILALRDAGAVAHAIRTMQVRGAPLIGAVAAYGLV 68
Query: 62 VDIKD-----------------------------------KQFPDNELIQL----IESML 82
+++ F E + +++
Sbjct: 69 FALQEDASDATLAKAAEDLVATRPTAINLRWAIERMVRHLSPFSPAERVAAGYAEADALC 128
Query: 83 EKDISDNKAIGRNGAQ---ALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++D+ N+AIGR+G + + D R ++N+LTHCN G +AT ++GTAL I H
Sbjct: 129 DEDLQVNEAIGRHGLELIREIWDRKGRQGRVNLLTHCNAGWIATVDWGTALAPIYMAH 186
>gi|188585058|ref|YP_001916603.1| translation initiation factor 2B subunit I family (IF-2BI)
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|218526918|sp|B2A5S2.1|MTNA_NATTJ RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|179349745|gb|ACB84015.1| translation initiation factor 2B subunit I family (IF-2BI)
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 153 NDSLEKYVGEK---LDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLI- 208
N+S EK+ E + L SARPTAVN+ A + + L + + NT + +I
Sbjct: 69 NESQEKFQQETKRAISELSSARPTAVNLFWALNKMNKLLGQVMEE---NTAPEDIYPIIL 125
Query: 209 ---ESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRS 265
+ ++++ N I G Q + + + +LTHCNTG+LAT YGTALGVIR
Sbjct: 126 NEAHKISDQELQRNYRIAEFGDQVISNGD------KILTHCNTGALATTGYGTALGVIRQ 179
Query: 266 LHGANKIGAAYCTETRPYNQGAR 288
H +K Y ETRP QGA+
Sbjct: 180 AHYNHKDIFVYVDETRPRLQGAK 202
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 97/223 (43%), Gaps = 57/223 (25%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGL 60
M S++ + +E L +LDQ LP + +D + AIK M RGAP I VG G+
Sbjct: 1 MVSVKPLKFEDDELLLLDQRKLPGKEEYFTCKTYQDVHFAIKEMVCRGAPLIGAVGAYGV 60
Query: 61 VVDIKD------KQFPD-----------------------NELIQLIESMLEKDIS--DN 89
+ ++ ++F N++ +L+ ++E++ + D
Sbjct: 61 ALACREFINESQEKFQQETKRAISELSSARPTAVNLFWALNKMNKLLGQVMEENTAPEDI 120
Query: 90 KAIGRNGAQALID----LNPRVSKL---------NVLTHCNTGSLATAEYGTALGVIRSL 136
I N A + D N R+++ +LTHCNTG+LAT YGTALGVIR
Sbjct: 121 YPIILNEAHKISDQELQRNYRIAEFGDQVISNGDKILTHCNTGALATTGYGTALGVIRQA 180
Query: 137 HGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKR 179
H +K + + YV E L A+ TA +K+
Sbjct: 181 HYNHKDIFV-------------YVDETRPRLQGAKLTAWELKQ 210
>gi|206900321|ref|YP_002250646.1| initiation factor 2B alpha/beta/delta [Dictyoglomus thermophilum
H-6-12]
gi|206739424|gb|ACI18482.1| initiation factor 2B alpha/beta/delta [Dictyoglomus thermophilum
H-6-12]
Length = 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 123 TAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAAD 182
A YG AL I+ + + +VD YV E + +RPTAVN+ A +
Sbjct: 52 VAAYGIALAAIK--YTGSNLVD--------------YVHEVMGEFAVSRPTAVNLFFAIE 95
Query: 183 SVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNV 242
+ + ++ SP + +K L++ + + E++ + AI G + L D V
Sbjct: 96 RMANVVNTNRNLSP-SELKILLLEEAKKIEEEEREKSIAISNFGIEILPD------NAKV 148
Query: 243 LTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
LTHCNTGSLAT GTALGVI+ KI Y TETRP QGAR
Sbjct: 149 LTHCNTGSLATIGPGTALGVIKEGWRKGKISHVYFTETRPLLQGAR 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 43/172 (25%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
++ I ++ + L ILDQ LP V + AIK M+VRGAP I +V G +
Sbjct: 1 MRPIEWKNNILYILDQTKLPWKEDYVLCFKYQQVIDAIKKMKVRGAPIIGVVAAYG--IA 58
Query: 64 IKDKQFPDNELIQLI-ESMLEKDISDNKAIGRNGAQALI--------DLNPRVSKL---- 110
+ ++ + L+ + E M E +S A+ A + +L+P K+
Sbjct: 59 LAAIKYTGSNLVDYVHEVMGEFAVSRPTAVNLFFAIERMANVVNTNRNLSPSELKILLLE 118
Query: 111 ----------------------------NVLTHCNTGSLATAEYGTALGVIR 134
VLTHCNTGSLAT GTALGVI+
Sbjct: 119 EAKKIEEEEREKSIAISNFGIEILPDNAKVLTHCNTGSLATIGPGTALGVIK 170
>gi|381405548|ref|ZP_09930232.1| translation initiation factor eIF-2B subunit alpha [Pantoea sp.
Sc1]
gi|380738747|gb|EIB99810.1| translation initiation factor eIF-2B subunit alpha [Pantoea sp.
Sc1]
Length = 340
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 70/129 (54%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ + L++L +ARPTAVN+ D +K +L++ A + + RL+Q +K + D
Sbjct: 75 LAQALEHLRAARPTAVNLMNNLDRMKVALAQPAFVTALTDEAWRLVQE-----DKQLCD- 128
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
AI G + PG S+L LTHCNTG LATA GTALGVI H I + E
Sbjct: 129 -AIAEAGC---TRIKPG-SQL--LTHCNTGGLATAGVGTALGVIARAHQQGWIKNVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 1 MKSLQSIIYE--KHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCL 58
M++L++ E + L ILDQ LP + ++V I +++VRGAP I + L
Sbjct: 1 MQTLKTTSLEVRDNQLWILDQQALPQQKNWLPAHSVTQLIDHIHALRVRGAPLIGLSASL 60
Query: 59 GLVVDIKDKQFPDNELIQLIESM---------LEKDISDNKAIGRNGA--QALIDLNPRV 107
L + + Q EL Q +E + L ++ K A AL D R+
Sbjct: 61 LLALLAEQGQT-RAELAQALEHLRAARPTAVNLMNNLDRMKVALAQPAFVTALTDEAWRL 119
Query: 108 SKLN--------------------VLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
+ + +LTHCNTG LATA GTALGVI H I ++
Sbjct: 120 VQEDKQLCDAIAEAGCTRIKPGSQLLTHCNTGGLATAGVGTALGVIARAHQQGWIKNV 177
>gi|385653543|ref|ZP_10048096.1| putative initiation factor eIF-2B alpha subunit [Leucobacter
chromiiresistens JG 31]
Length = 347
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
L ARPTAVN+ D + L E A A ++ R ++DI+ ++G
Sbjct: 84 VLREARPTAVNLSWGVDRALTRLDEGAAAVLDEAIRIR---------DEDIAACISMGLR 134
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
GA +L G +++V+T CNTGSLAT E GTALGVI++L + A ETRP Q
Sbjct: 135 GADLTRELA-GQDRVSVMTICNTGSLATVERGTALGVIQTLLEQGSLVEALPLETRPLLQ 193
Query: 286 GAR 288
GAR
Sbjct: 194 GAR 196
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 43/183 (23%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+++I + +++++DQ LLP ++ I + + I+ + VRGAPA+ + G G+ +
Sbjct: 1 MRTIDWVDGAIELIDQTLLPQRVEVRRITELPELIDDIQRLAVRGAPALGVAGAFGVALI 60
Query: 64 IKDKQFP--------------------------------DNELIQLIES----------M 81
Q D L +L E +
Sbjct: 61 AASVQASRGEDELDRDEVRRQAAVLREARPTAVNLSWGVDRALTRLDEGAAAVLDEAIRI 120
Query: 82 LEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 141
++DI+ ++G GA +L + +++V+T CNTGSLAT E GTALGVI++L
Sbjct: 121 RDEDIAACISMGLRGADLTRELAGQ-DRVSVMTICNTGSLATVERGTALGVIQTLLEQGS 179
Query: 142 IVD 144
+V+
Sbjct: 180 LVE 182
>gi|354596391|ref|ZP_09014408.1| Methylthioribose-1-phosphate isomerase [Brenneria sp. EniD312]
gi|353674326|gb|EHD20359.1| Methylthioribose-1-phosphate isomerase [Brenneria sp. EniD312]
Length = 340
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 73/129 (56%), Gaps = 13/129 (10%)
Query: 160 VGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDN 219
+ + L+ L +ARPTAVN+ D +K +L++ A + RL++ ++ E+ I+D
Sbjct: 75 LADALETLRAARPTAVNLMNNLDRMKLALAQPQFAPAMTREALRLVEEDRALCEQ-IADY 133
Query: 220 KAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTE 279
A AL+ PG S+L LTHCNTG LATA GTA+GV+ H A K+ + E
Sbjct: 134 GA-------ALV--KPG-SRL--LTHCNTGGLATAGIGTAIGVLLRAHQAGKVAQVWVDE 181
Query: 280 TRPYNQGAR 288
TRP QG R
Sbjct: 182 TRPLLQGGR 190
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 81 MLEKDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGAN 140
++E+D + + I GA AL+ R+ LTHCNTG LATA GTA+GV+ H A
Sbjct: 119 LVEEDRALCEQIADYGA-ALVKPGSRL-----LTHCNTGGLATAGIGTAIGVLLRAHQAG 172
Query: 141 KIVDI 145
K+ +
Sbjct: 173 KVAQV 177
>gi|403716104|ref|ZP_10941721.1| methylthioribose-1-phosphate isomerase [Kineosphaera limosa NBRC
100340]
gi|403210152|dbj|GAB96404.1| methylthioribose-1-phosphate isomerase [Kineosphaera limosa NBRC
100340]
Length = 359
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 157 EKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
E + ++D + ARPTAVN+ D +A V +Q++ D
Sbjct: 89 ESRLRAEIDRIRDARPTAVNLAWGVDEALGR-----RADGREAVLAAALQIVAD----DE 139
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ N+ + R GA L+ G +L ++THCNTG+LAT +GTA G+I L+ + Y
Sbjct: 140 AANRELSRVGADWLL-ARTGRERLRIVTHCNTGALATTAWGTAYGIIHELYTRGAVDLVY 198
Query: 277 CTETRPYNQGAR 288
ETRP QGAR
Sbjct: 199 ADETRPLLQGAR 210
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 40/175 (22%)
Query: 1 MKSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC--- 57
++L+ + H L++LDQ LP + I V+ AI ++ VRGAPA+ G
Sbjct: 17 FRALEWVPQPAH-LRLLDQRELPRRETYLQITEVDALVAAIVTLAVRGAPALGAAGALGV 75
Query: 58 ----------------LGLVVD-IKDKQFPDNELIQLIESMLEK---------------- 84
L +D I+D + L ++ L +
Sbjct: 76 VVALEQAEREGWDESRLRAEIDRIRDARPTAVNLAWGVDEALGRRADGREAVLAAALQIV 135
Query: 85 --DISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
D + N+ + R GA L+ R +L ++THCNTG+LAT +GTA G+I L+
Sbjct: 136 ADDEAANRELSRVGADWLLARTGR-ERLRIVTHCNTGALATTAWGTAYGIIHELY 189
>gi|291295386|ref|YP_003506784.1| aIF-2BI family translation initiation factor [Meiothermus ruber DSM
1279]
gi|290470345|gb|ADD27764.1| translation initiation factor, aIF-2BI family [Meiothermus ruber
DSM 1279]
Length = 327
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 83/202 (41%), Gaps = 51/202 (25%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD----- 63
+E ++ +LDQ LP V D I+ M VRGAPAI + G+V+
Sbjct: 8 FENNTFWLLDQRRLPFEEVWVPCQTARDIAAGIREMVVRGAPAIGVTAAYGMVLAHLSGE 67
Query: 64 --------IKDKQFPDNELIQLIESM------LEKDISDNK-----------AIGRNGAQ 98
++ + L ++ M LE + + + AI R+GA+
Sbjct: 68 DLAEADALLRQSRPTAVNLFYALDRMKPHWGSLEASLREAQAIWDEVQETELAISRHGAK 127
Query: 99 ALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEK 158
L + VLTHCNTG LAT YGTALG I H ++ +
Sbjct: 128 VL--------RGQVLTHCNTGPLATGGYGTALGAIVEAHRQGRVTHV------------- 166
Query: 159 YVGEKLDYLVSARPTAVNMKRA 180
+V E YL AR TA +++A
Sbjct: 167 WVDETRPYLQGARLTAYELQKA 188
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 18/122 (14%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L +RPTAVN+ A D +K W R Q I +++ AI R+G
Sbjct: 76 LRQSRPTAVNLFYALDRMKP---HWGSLE----ASLREAQAIWDEVQET---ELAISRHG 125
Query: 227 AQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQG 286
A+ L + VLTHCNTG LAT YGTALG I H ++ + ETRPY QG
Sbjct: 126 AKVL--------RGQVLTHCNTGPLATGGYGTALGAIVEAHRQGRVTHVWVDETRPYLQG 177
Query: 287 AR 288
AR
Sbjct: 178 AR 179
>gi|378578492|ref|ZP_09827167.1| methylthioribose-1-phosphate isomerase [Pantoea stewartii subsp.
stewartii DC283]
gi|377818772|gb|EHU01853.1| methylthioribose-1-phosphate isomerase [Pantoea stewartii subsp.
stewartii DC283]
Length = 340
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
+ + + LD L +ARPTAVN+ D +K +L++ A+ + RL+ + + ++
Sbjct: 73 EQLAQSLDTLRAARPTAVNLMNNLDRMKQALAQPEMATSLMEEALRLVHEDKQLCDRIAD 132
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
A+ + G+Q +LTHCNTG LATA GTALGVI H + +
Sbjct: 133 AGSALVKPGSQ-------------LLTHCNTGGLATAGVGTALGVIARAHQQGHVHNVWV 179
Query: 278 TETRPYNQGAR 288
ETRP QG R
Sbjct: 180 DETRPLLQGGR 190
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 36/171 (21%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC- 57
M++ Q S+ + L ILDQ LP + + V I +++VRGAP I +
Sbjct: 1 MQTFQTTSLQVRNNQLWILDQQALPQQKNWLPAHTVAQLVDHIHALRVRGAPLIGLSASL 60
Query: 58 --------------LGLVVDIKDKQFPD-----NELIQLIESMLEKDIS----------- 87
L +D P N L ++ +++ + +++
Sbjct: 61 LLALLAEQGESREQLAQSLDTLRAARPTAVNLMNNLDRMKQALAQPEMATSLMEEALRLV 120
Query: 88 -DNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
++K + A A L S+L LTHCNTG LATA GTALGVI H
Sbjct: 121 HEDKQLCDRIADAGSALVKPGSQL--LTHCNTGGLATAGVGTALGVIARAH 169
>gi|403379851|ref|ZP_10921908.1| translation initiation factor, aIF-2BI family protein
[Paenibacillus sp. JC66]
Length = 366
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 126 YGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAADSVK 185
+G LGV H A K D ++K+ L+K V E DYL ++RPTAVN+ A D ++
Sbjct: 69 FGVYLGV--RDHEAVKEDDSENKR-----ELDKQVNEAADYLATSRPTAVNLFWALDRIR 121
Query: 186 SSLSEWA--KASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGAQALIDLNPGVSKLNVL 243
+ ++ A + +K ++Q + + ++D + IG + + D + VL
Sbjct: 122 ARAAKDADDPQTTYEAMKANILQEAKLIQQEDEETCRLIGEHALTLMQD------GMGVL 175
Query: 244 THCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGAR 288
THCN G LATA YGTAL + ETRP QGAR
Sbjct: 176 THCNAGGLATARYGTALAPFYLAKDQGMNIKVFADETRPVLQGAR 220
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 41/60 (68%)
Query: 9 YEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQ 68
++++ L++LDQ LLP T +D++ + + ++AI M+VRGAPAI I G+ + ++D +
Sbjct: 20 WKENVLQLLDQTLLPETVLYLDLSRINEVWEAISQMKVRGAPAIGIAAAFGVYLGVRDHE 79
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 110 LNVLTHCNTGSLATAEYGTALG 131
+ VLTHCN G LATA YGTAL
Sbjct: 172 MGVLTHCNAGGLATARYGTALA 193
>gi|254559248|ref|YP_003066343.1| translation initiation factor, aIF-2B subunit alpha
[Methylobacterium extorquens DM4]
gi|254266526|emb|CAX22290.1| putative translation initiation factor, aIF-2B alpha subunit
(eIF-2B) [Methylobacterium extorquens DM4]
Length = 365
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 5/136 (3%)
Query: 153 NDSLEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESML 212
D+ E + + L + RPTA+N++ A D + + L + +P + + ++
Sbjct: 72 QDASEAGIEQASATLAATRPTAINLRWALDRMAAVL----RRAPQSAREALAFTEAAAIA 127
Query: 213 EKDISDNKAIGRNGAQALIDLNPGV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANK 271
++D++ +AIG +GA+ L + +NVLTHCN G LAT ++GTAL I H A
Sbjct: 128 DEDVASCRAIGEHGAKILSAIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGV 187
Query: 272 IGAAYCTETRPYNQGA 287
+ ETRP NQGA
Sbjct: 188 PVHVFVDETRPRNQGA 203
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 41/182 (22%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKD------ 66
++ ++DQ LP +L + N++DA AI++M VRGAP I + G+ + ++
Sbjct: 19 AVMVIDQTRLPFAFELKRLANLDDAAVAIRTMVVRGAPLIGVTAAYGMALAMRQDASEAG 78
Query: 67 -----------------------------KQFPDN--ELIQLIES--MLEKDISDNKAIG 93
++ P + E + E+ + ++D++ +AIG
Sbjct: 79 IEQASATLAATRPTAINLRWALDRMAAVLRRAPQSAREALAFTEAAAIADEDVASCRAIG 138
Query: 94 RNGAQALIDLNPRV-SKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-DKQFP 151
+GA+ L + + +NVLTHCN G LAT ++GTAL I H A V + D+ P
Sbjct: 139 EHGAKILSAIAAKKDGPVNVLTHCNAGWLATVDWGTALAPIYVAHDAGVPVHVFVDETRP 198
Query: 152 DN 153
N
Sbjct: 199 RN 200
>gi|152988035|ref|YP_001347341.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa PA7]
gi|218526923|sp|A6V2Q6.1|MTNA_PSEA7 RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase
gi|150963193|gb|ABR85218.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa PA7]
Length = 358
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 51/183 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L++LDQ LLP +D + + +AI+ M VRGAPAI I G+V
Sbjct: 9 ERVKAIEWRDGTLRLLDQRLLPQEEVWLDHGSAAEVAKAIRDMVVRGAPAIGISAAYGIV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKD---ISDNKAIGRNGAQALIDLNPRVSKL-------- 110
+ + + + + LE+D ++D++ N AL + R+ ++
Sbjct: 69 LGARARLARGGDW----RTALEEDFRLLADSRPTAVNLFWALNRMRERLERMKEGDRPLA 124
Query: 111 ------------------------------------NVLTHCNTGSLATAEYGTALGVIR 134
N+LTHCNTG+LAT +GTALGVIR
Sbjct: 125 VLEAEAISIHDSDREANLTMAQLGMELIRKQQSSPQNILTHCNTGALATGGFGTALGVIR 184
Query: 135 SLH 137
+ H
Sbjct: 185 AAH 187
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E L +RPTAVN+ A + ++ L + P+ ++ I + +S D N
Sbjct: 87 EDFRLLADSRPTAVNLFWALNRMRERLERMKEGDRPLAVLEAEAISIHDS----DREANL 142
Query: 221 AIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTET 280
+ + G + + S N+LTHCNTG+LAT +GTALGVIR+ H + + ET
Sbjct: 143 TMAQLGMELIRKQQS--SPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIHADET 200
Query: 281 RPYNQGAR 288
RP+ QG+R
Sbjct: 201 RPWLQGSR 208
>gi|376260310|ref|YP_005147030.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium sp.
BNL1100]
gi|373944304|gb|AEY65225.1| S-methyl-5-thioribose-1-phosphate isomerase [Clostridium sp.
BNL1100]
Length = 362
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 166 YLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRN 225
YL S+RPTAVN+ A D + + +K V+ +K L++ + E+D ++IG
Sbjct: 94 YLASSRPTAVNLFWALDRMDECVKR-SKEKTVDDIKVELLKESHKIKEEDTWVCRSIGEY 152
Query: 226 GAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
G L L PG + +LTHCN G LAT++YGTAL I + ETRP Q
Sbjct: 153 G---LALLKPG---MGILTHCNAGQLATSKYGTALAPIYVGQEKGYNLKVFADETRPLLQ 206
Query: 286 GAR 288
GAR
Sbjct: 207 GAR 209
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 48/165 (29%)
Query: 14 LKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD---IKDKQFP 70
L I+DQ LLP + + + E+ ++AI ++VRGAPAI + G+ + +K +++
Sbjct: 23 LIIIDQTLLPTETVFLKLKTQEEMWEAIYKLRVRGAPAIGVAAAYGIYLGAKALKAQEYD 82
Query: 71 D--NELIQL------------------------IESMLEKDISDNKA------------- 91
+E I+L ++ EK + D K
Sbjct: 83 GFYSEFIRLKKYLASSRPTAVNLFWALDRMDECVKRSKEKTVDDIKVELLKESHKIKEED 142
Query: 92 --IGRN-GAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVI 133
+ R+ G L L P + +LTHCN G LAT++YGTAL I
Sbjct: 143 TWVCRSIGEYGLALLKP---GMGILTHCNAGQLATSKYGTALAPI 184
>gi|154252694|ref|YP_001413518.1| eIF-2B alpha/beta/delta-like protein [Parvibaculum lavamentivorans
DS-1]
gi|154156644|gb|ABS63861.1| eIF-2B alpha/beta/delta-related uncharacterized protein
[Parvibaculum lavamentivorans DS-1]
Length = 364
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 27/169 (15%)
Query: 122 ATAEYGTALGVIRSLHGANKIVDIKDKQFPDNDSLEKYVGEKLDYLVSARPTAVNMKRAA 181
ATA YG L + ++ P +++L + D L + RPTAVN+K +
Sbjct: 60 ATAAYGLCLAL---------------REDPSDEALAR----AYDMLAATRPTAVNLKYSL 100
Query: 182 DSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG---AQALIDLNPGVS 238
D+++ ++ + N + ++D+ + IG NG + + + PG
Sbjct: 101 DAMRDAVGKVGH----NARAEAAYAEAARLCDEDVETCRRIGENGLRLIRGVAEAKPG-Q 155
Query: 239 KLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQGA 287
+NVLTHCN G LA ++GTAL I H A + ETRP NQGA
Sbjct: 156 TVNVLTHCNAGWLACVDWGTALAPIYMAHDAGIPVHVWVDETRPRNQGA 204
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 48/186 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIKDKQFPDN 72
S++I+DQ LPH ++ + +DA +AIK M VRGAP I GL + +++ P +
Sbjct: 19 SVEIIDQTRLPHEFTIIRLQTADDAARAIKDMAVRGAPLIGATAAYGLCLALRED--PSD 76
Query: 73 ELIQLIESML-----------------------------------------EKDISDNKA 91
E + ML ++D+ +
Sbjct: 77 EALARAYDMLAATRPTAVNLKYSLDAMRDAVGKVGHNARAEAAYAEAARLCDEDVETCRR 136
Query: 92 IGRNG---AQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDIK-D 147
IG NG + + + P +NVLTHCN G LA ++GTAL I H A V + D
Sbjct: 137 IGENGLRLIRGVAEAKPG-QTVNVLTHCNAGWLACVDWGTALAPIYMAHDAGIPVHVWVD 195
Query: 148 KQFPDN 153
+ P N
Sbjct: 196 ETRPRN 201
>gi|386014808|ref|YP_005933085.1| putative translation initiation factor eIF-2B [Pantoea ananatis
AJ13355]
gi|386080513|ref|YP_005994038.1| putative translation initiation factor eIF-2B [Pantoea ananatis
PA13]
gi|327392867|dbj|BAK10289.1| putative translation initiation factor eIF-2B [Pantoea ananatis
AJ13355]
gi|354989694|gb|AER33818.1| putative translation initiation factor eIF-2B [Pantoea ananatis
PA13]
Length = 340
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDIS 217
+ + + L+ L +ARPTAVN+ D +K +L + + + + RL+Q + + ++
Sbjct: 73 EQLAQSLEILRAARPTAVNLMNNLDRMKQALEQPDRVTSLAEEALRLVQEDKQLCDRIAE 132
Query: 218 DNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYC 277
++ + G+Q +LTHCNTG LATA GTALGVI H K+ +
Sbjct: 133 AGSSLVKPGSQ-------------LLTHCNTGGLATAGVGTALGVIARAHQEGKVRNVWV 179
Query: 278 TETRPYNQGAR 288
ETRP QG R
Sbjct: 180 DETRPLLQGGR 190
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 1 MKSLQ--SIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGC- 57
M++ Q S+ + L ILDQ LP + ++V + I +++VRGAP I +
Sbjct: 1 MQTFQTTSLQVRNNQLWILDQQALPQQKNWLPAHSVAQLVEHIHALRVRGAPLIGLSASL 60
Query: 58 --------------LGLVVDIKDKQFPD-----NELIQLIESMLEKD------------I 86
L ++I P N L ++ +++ + D +
Sbjct: 61 LLALLAEQGETREQLAQSLEILRAARPTAVNLMNNLDRMKQALEQPDRVTSLAEEALRLV 120
Query: 87 SDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIVDI 145
++K + A+A L S+L LTHCNTG LATA GTALGVI H K+ ++
Sbjct: 121 QEDKQLCDRIAEAGSSLVKPGSQL--LTHCNTGGLATAGVGTALGVIARAHQEGKVRNV 177
>gi|452877438|ref|ZP_21954724.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
VRFPA01]
gi|452185820|gb|EME12838.1| methylthioribose-1-phosphate isomerase [Pseudomonas aeruginosa
VRFPA01]
Length = 358
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 51/183 (27%)
Query: 2 KSLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLV 61
+ +++I + +L++LDQ LLP +D + + +AI+ M VRGAPAI I G+V
Sbjct: 9 ERVKAIEWRDGTLRLLDQRLLPQEEVWLDHGSAAEVAKAIRDMVVRGAPAIGISAAYGIV 68
Query: 62 VDIKDKQFPDNELIQLIESMLEKD---ISDNKAIGRNGAQALIDLNPRVSKL-------- 110
+ + + + + LE+D ++D++ N AL + R+ ++
Sbjct: 69 LGARARLARGGDW----RAALEEDFRLLADSRPTAVNLFWALNRMRERLERMKEGDRPLA 124
Query: 111 ------------------------------------NVLTHCNTGSLATAEYGTALGVIR 134
N+LTHCNTG+LAT +GTALGVIR
Sbjct: 125 VLEAEAISIHDSDREANLTMAQLGMELIRKQQSSPQNILTHCNTGALATGGFGTALGVIR 184
Query: 135 SLH 137
+ H
Sbjct: 185 AAH 187
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 11/130 (8%)
Query: 162 EKLDYLVSARPTAVNMKRAADSVKSSLSEWAKAS-PVNTVKTRLIQLIESMLEKDISDNK 220
E L +RPTAVN+ A + ++ L + P+ ++ I + +S E +++
Sbjct: 87 EDFRLLADSRPTAVNLFWALNRMRERLERMKEGDRPLAVLEAEAISIHDSDREANLT--- 143
Query: 221 AIGRNGAQALIDL--NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCT 278
AQ ++L S N+LTHCNTG+LAT +GTALGVIR+ H + +
Sbjct: 144 -----MAQLGMELIRKQQSSPQNILTHCNTGALATGGFGTALGVIRAAHLEGLVNRIHAD 198
Query: 279 ETRPYNQGAR 288
ETRP+ QG+R
Sbjct: 199 ETRPWLQGSR 208
>gi|282163301|ref|YP_003355686.1| putative translation initiation factor aIF-2B subunit 1
[Methanocella paludicola SANAE]
gi|282155615|dbj|BAI60703.1| putative translation initiation factor aIF-2B subunit 1
[Methanocella paludicola SANAE]
Length = 360
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 158 KYVGEKLDYLVSARPTAVNMKRAADSV-KSSLSEWAKASPVNTVKTRLIQLIESMLEKDI 216
K + E + L RPTAVN+ D V ++L+ +A V++ ++ +++ ++D+
Sbjct: 78 KKLTEGAESLKKVRPTAVNLSWGVDRVLAAALTGKDRAE----VESTALREAKALADEDV 133
Query: 217 SDNKAIGRNGAQALIDLNPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAY 276
+ +AIG +GA+ L S V+THCN G LA ++GTALGVIRS K
Sbjct: 134 AQCRAIGEHGAKLL------ESSDTVMTHCNAGRLACVDWGTALGVIRSAVEQGKDIKVI 187
Query: 277 CTETRPYNQGAR 288
ETRP NQG+R
Sbjct: 188 SCETRPLNQGSR 199
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 52/172 (30%)
Query: 10 EKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVR---------------------- 47
EK + I+DQ LP L+DI++V ++AI ++VR
Sbjct: 11 EKGCITIIDQTALPSKLVLLDIDHVNVLHEAILKLRVRGAPALGAAGGFGVALLARSIRA 70
Query: 48 ------------GAPAIAIVG------------CLGLVVDIKDKQFPDNELIQLIESMLE 83
GA ++ V L + KD+ ++ ++ +++ +
Sbjct: 71 NDFKDYIKKLTEGAESLKKVRPTAVNLSWGVDRVLAAALTGKDRAEVESTALREAKALAD 130
Query: 84 KDISDNKAIGRNGAQALIDLNPRVSKLNVLTHCNTGSLATAEYGTALGVIRS 135
+D++ +AIG +GA+ L S V+THCN G LA ++GTALGVIRS
Sbjct: 131 EDVAQCRAIGEHGAKLL------ESSDTVMTHCNAGRLACVDWGTALGVIRS 176
>gi|194337103|ref|YP_002018897.1| translation initiation factor, aIF-2BI family [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309580|gb|ACF44280.1| translation initiation factor, aIF-2BI family [Pelodictyon
phaeoclathratiforme BU-1]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 51/182 (28%)
Query: 4 LQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVD 63
+ +I + +L+ LDQ LP + V N E+A +AIK++ VRGAP I + +++
Sbjct: 2 IDAISFNDSTLRYLDQRYLPLREEYVSTRNYEEAIEAIKTLAVRGAPLIGVAAAYTIILG 61
Query: 64 IKDKQ-----FP--------------------------------DNELIQLIESMLEK-- 84
I Q FP +N IE++ K
Sbjct: 62 INSFQGTKEEFPSFFKSLVAEVEASRPTAVNLFFAAARLKKVYAENYETDTIEALFAKMN 121
Query: 85 ---------DISDNKAIGRNGA-QALIDLNP--RVSKLNVLTHCNTGSLATAEYGTALGV 132
+I++ A+ R+G Q IDL + KLNVLTHCNTG+LA G+ALGV
Sbjct: 122 TAARKIHDDEIANCDAMSRHGVDQIKIDLAHILKTRKLNVLTHCNTGTLACCGTGSALGV 181
Query: 133 IR 134
IR
Sbjct: 182 IR 183
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 169 SARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNGA- 227
++RPTAVN+ AA +K +E + + + ++ + + +I++ A+ R+G
Sbjct: 85 ASRPTAVNLFFAAARLKKVYAENYETDTIEALFAKMNTAARKIHDDEIANCDAMSRHGVD 144
Query: 228 QALIDLNP--GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPYNQ 285
Q IDL KLNVLTHCNTG+LA G+ALGVIR I +E+RP Q
Sbjct: 145 QIKIDLAHILKTRKLNVLTHCNTGTLACCGTGSALGVIRLAWQEGLIERVITSESRPLLQ 204
Query: 286 GAR 288
G R
Sbjct: 205 GLR 207
>gi|148678993|gb|EDL10940.1| RIKEN cDNA 2410018C20, isoform CRA_a [Mus musculus]
Length = 162
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 53/161 (32%)
Query: 3 SLQSIIYEKHSLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV 62
+L++I Y SL+ILDQL LP +++V+ A +AI++M+VRGAPAIA+VGCL L V
Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAV 61
Query: 63 DIKDKQ----------FPDNELIQLI---------------------------------- 78
+++ F ++L L+
Sbjct: 62 ELRAGAGGPGLAALVAFVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETV 121
Query: 79 --------ESMLEKDISDNKAIGRNGAQALID-LNPRVSKL 110
E MLEKD+ DN++IG GA+ L++ NPR K+
Sbjct: 122 RERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKV 162
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 159 YVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAK--ASPVNTVKTRLIQLIESMLEKDI 216
+V ++L LV+ARPTAVNM RAA + ++ A+ + TV+ R+I+ E MLEKD+
Sbjct: 78 FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDL 137
Query: 217 SDNKAIGRNGAQALID-LNP 235
DN++IG GA+ L++ NP
Sbjct: 138 KDNRSIGDLGARHLLEQTNP 157
>gi|170750514|ref|YP_001756774.1| aIF-2BI family translation initiation factor [Methylobacterium
radiotolerans JCM 2831]
gi|170657036|gb|ACB26091.1| translation initiation factor, aIF-2BI family [Methylobacterium
radiotolerans JCM 2831]
Length = 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Query: 167 LVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKDISDNKAIGRNG 226
L + RPTA+N++ A D V ++L + A + R + E+D++ +AIG +G
Sbjct: 86 LAATRPTAINLRWALDRVSANLRQTAP----DERFARAFAEAGRIAEEDVASCRAIGAHG 141
Query: 227 AQALIDLNP---GVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKIGAAYCTETRPY 283
Q + DL+ G + VLTHCN G LAT ++GTAL + + H ETRP
Sbjct: 142 GQIIADLHAARGGDRPITVLTHCNAGWLATVDWGTALAPVYAAHERGVPVHVLVDETRPR 201
Query: 284 NQGA 287
+QGA
Sbjct: 202 SQGA 205
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVVDIK------- 65
S++++DQ LP +L + +EDA AI++M VRGAP I + GL + ++
Sbjct: 19 SVQVIDQTRLPFAFELRRLATLEDAAVAIRTMIVRGAPLIGVTAAYGLALAMRADASHDG 78
Query: 66 -----------------------------DKQFPDNELIQLIES---MLEKDISDNKAIG 93
+ PD + + E+D++ +AIG
Sbjct: 79 IDRAVATLAATRPTAINLRWALDRVSANLRQTAPDERFARAFAEAGRIAEEDVASCRAIG 138
Query: 94 RNGAQALIDLNPRVS---KLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+G Q + DL+ + VLTHCN G LAT ++GTAL + + H
Sbjct: 139 AHGGQIIADLHAARGGDRPITVLTHCNAGWLATVDWGTALAPVYAAH 185
>gi|432944391|ref|ZP_20140855.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE196]
gi|433045843|ref|ZP_20233305.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE117]
gi|431465054|gb|ELH45166.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE196]
gi|431549622|gb|ELI23699.1| methylthioribose-1-phosphate isomerase [Escherichia coli KTE117]
Length = 371
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 156 LEKYVGEKLDYLVSARPTAVNMKRAADSVKSSLSEWAKASPVNTVKTRLIQLIESMLEKD 215
L++Y D L+ RPTA+N+K A D + +L K V+ K L + E+D
Sbjct: 79 LQRY----YDLLIKTRPTAINLKWALDRMIDTL----KDLCVSERKDVAWALAAEIAEED 130
Query: 216 ISDNKAIGRNGAQALIDL---NPGVSKLNVLTHCNTGSLATAEYGTALGVIRSLHGANKI 272
++ + IG +G + + ++ P S +N+LTHCN G LAT ++GTAL I H
Sbjct: 131 VALCEQIGLHGTEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSPIYKAHENGIP 190
Query: 273 GAAYCTETRPYNQGA 287
+ ETRP NQG
Sbjct: 191 VHVWVDETRPRNQGG 205
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 42/167 (25%)
Query: 13 SLKILDQLLLPHTSKLVDINNVEDAYQAIKSMQVRGAPAIAIVGCLGLVV-------DIK 65
+++I+DQ LP ++V + + E A AI+ M VRGAP I +V G+ + D+
Sbjct: 19 AVEIIDQTKLPFKFEVVALTSAEMAATAIQEMWVRGAPLIGVVAAYGIALGMNHDASDMG 78
Query: 66 DKQFPD----------------NELIQLIESML----------------EKDISDNKAIG 93
+++ D + +I ++ + E+D++ + IG
Sbjct: 79 LQRYYDLLIKTRPTAINLKWALDRMIDTLKDLCVSERKDVAWALAAEIAEEDVALCEQIG 138
Query: 94 RNGAQALIDL---NPRVSKLNVLTHCNTGSLATAEYGTALGVIRSLH 137
+G + + ++ P S +N+LTHCN G LAT ++GTAL I H
Sbjct: 139 LHGTEVIREIAQKKPAGSVVNILTHCNAGWLATVDWGTALSPIYKAH 185
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,192,815,383
Number of Sequences: 23463169
Number of extensions: 164126736
Number of successful extensions: 363764
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1901
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 355343
Number of HSP's gapped (non-prelim): 5851
length of query: 288
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 147
effective length of database: 9,050,888,538
effective search space: 1330480615086
effective search space used: 1330480615086
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 76 (33.9 bits)